##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM60125v2 #!genome-build-accession NCBI_Assembly:GCF_000601255.2 #!annotation-date 09/11/2025 10:43:21 #!annotation-source NCBI RefSeq GCF_000601255.2-RS_2025_09_11 ##sequence-region NZ_JHDH01000001.1 1 10404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000001.1 RefSeq region 1 10404 . + . ID=NZ_JHDH01000001.1:1..10404;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000001.1 RefSeq gene 16 276 . + . ID=gene-AB11_RS00005;Name=AB11_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00005;old_locus_tag=AB11_4870 NZ_JHDH01000001.1 Protein Homology CDS 16 276 . + 0 ID=cds-WP_000083819.1;Parent=gene-AB11_RS00005;Dbxref=GenBank:WP_000083819.1;Name=WP_000083819.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858391.1;locus_tag=AB11_RS00005;product=replication regulatory protein RepA;protein_id=WP_000083819.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 501 575 . + . ID=gene-AB11_RS00010;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB11_RS00010 NZ_JHDH01000001.1 Protein Homology CDS 501 575 . + 0 ID=cds-WP_001365705.1;Parent=gene-AB11_RS00010;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AB11_RS00010;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 568 1425 . + . ID=gene-AB11_RS00015;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB11_RS00015;old_locus_tag=AB11_4871 NZ_JHDH01000001.1 Protein Homology CDS 568 1425 . + 0 ID=cds-WP_032222475.1;Parent=gene-AB11_RS00015;Dbxref=GenBank:WP_032222475.1;Name=WP_032222475.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB11_RS00015;product=incFII family plasmid replication initiator RepA;protein_id=WP_032222475.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 2341 2610 . + . ID=gene-AB11_RS00020;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AB11_RS00020;old_locus_tag=AB11_4873 NZ_JHDH01000001.1 Protein Homology CDS 2341 2610 . + 0 ID=cds-WP_000079939.1;Parent=gene-AB11_RS00020;Dbxref=GenBank:WP_000079939.1;Name=WP_000079939.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AB11_RS00020;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079939.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 2610 2888 . + . ID=gene-AB11_RS00025;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=protein_coding;locus_tag=AB11_RS00025;old_locus_tag=AB11_4874 NZ_JHDH01000001.1 Protein Homology CDS 2610 2888 . + 0 ID=cds-WP_244442720.1;Parent=gene-AB11_RS00025;Dbxref=GenBank:WP_244442720.1;Name=WP_244442720.1;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=AB11_RS00025;product=type II toxin-antitoxin system toxin YacB;protein_id=WP_244442720.1;transl_table=11 NZ_JHDH01000001.1 RefSeq pseudogene 2923 3189 . + . ID=gene-AB11_RS25115;Name=AB11_RS25115;end_range=3189,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25115;partial=true;pseudo=true NZ_JHDH01000001.1 Protein Homology CDS 2923 3189 . + 0 ID=cds-AB11_RS25115;Parent=gene-AB11_RS25115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3189,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057990.1;locus_tag=AB11_RS25115;partial=true;product=3'-5' exonuclease;pseudo=true;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 3628 4386 . + . ID=gene-AB11_RS00030;Name=AB11_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00030;old_locus_tag=AB11_4875 NZ_JHDH01000001.1 Protein Homology CDS 3628 4386 . + 0 ID=cds-WP_001258297.1;Parent=gene-AB11_RS00030;Dbxref=GenBank:WP_001258297.1;Name=WP_001258297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001258297.1;locus_tag=AB11_RS00030;product=substrate-binding domain-containing protein;protein_id=WP_001258297.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 4672 5511 . + . ID=gene-AB11_RS00035;Name=AB11_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00035;old_locus_tag=AB11_4876 NZ_JHDH01000001.1 Protein Homology CDS 4672 5511 . + 0 ID=cds-WP_071996207.1;Parent=gene-AB11_RS00035;Dbxref=GenBank:WP_071996207.1;Name=WP_071996207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025388.6;locus_tag=AB11_RS00035;product=DUF4238 domain-containing protein;protein_id=WP_071996207.1;transl_table=11 NZ_JHDH01000001.1 RefSeq pseudogene 5782 5880 . + . ID=gene-AB11_RS00040;Name=AB11_RS00040;end_range=5880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00040;partial=true;pseudo=true NZ_JHDH01000001.1 Protein Homology CDS 5782 5880 . + 0 ID=cds-AB11_RS00040;Parent=gene-AB11_RS00040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5880,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AB11_RS00040;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 6002 6352 . - . ID=gene-AB11_RS00045;Name=AB11_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00045 NZ_JHDH01000001.1 Protein Homology CDS 6002 6352 . - 0 ID=cds-WP_000361383.1;Parent=gene-AB11_RS00045;Dbxref=GenBank:WP_000361383.1;Name=WP_000361383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001630992.1;locus_tag=AB11_RS00045;product=plasmid partitioning/stability family protein;protein_id=WP_000361383.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 6355 7317 . - . ID=gene-AB11_RS00050;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;gene_synonym=stbA;locus_tag=AB11_RS00050;old_locus_tag=AB11_4878 NZ_JHDH01000001.1 Protein Homology CDS 6355 7317 . - 0 ID=cds-WP_000959875.1;Parent=gene-AB11_RS00050;Dbxref=GenBank:WP_000959875.1;Name=WP_000959875.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959884.1;locus_tag=AB11_RS00050;product=plasmid segregation protein ParM;protein_id=WP_000959875.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 7423 7629 . - . ID=gene-AB11_RS25665;Name=AB11_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25665 NZ_JHDH01000001.1 Protein Homology CDS 7423 7629 . - 0 ID=cds-WP_306790992.1;Parent=gene-AB11_RS25665;Dbxref=GenBank:WP_306790992.1;Name=WP_306790992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311063.1;locus_tag=AB11_RS25665;product=hypothetical protein;protein_id=WP_306790992.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 7530 7757 . + . ID=gene-AB11_RS00055;Name=AB11_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00055 NZ_JHDH01000001.1 Protein Homology CDS 7530 7757 . + 0 ID=cds-WP_306293882.1;Parent=gene-AB11_RS00055;Dbxref=GenBank:WP_306293882.1;Name=WP_306293882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015589601.1;locus_tag=AB11_RS00055;product=hypothetical protein;protein_id=WP_306293882.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 7833 8516 . + . ID=gene-AB11_RS00060;Name=AB11_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00060;old_locus_tag=AB11_4880 NZ_JHDH01000001.1 Protein Homology CDS 7833 8516 . + 0 ID=cds-WP_000086171.1;Parent=gene-AB11_RS00060;Dbxref=GenBank:WP_000086171.1;Name=WP_000086171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=AB11_RS00060;product=DNA methylase;protein_id=WP_000086171.1;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 8517 8738 . + . ID=gene-AB11_RS00065;Name=AB11_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00065;old_locus_tag=AB11_4881 NZ_JHDH01000001.1 Protein Homology CDS 8517 8738 . + 0 ID=cds-WP_001464085.1;Parent=gene-AB11_RS00065;Dbxref=GenBank:WP_001464085.1;Name=WP_001464085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AB11_RS00065;product=hypothetical protein;protein_id=WP_001464085.1;transl_table=11 NZ_JHDH01000001.1 RefSeq pseudogene 8668 9185 . + . ID=gene-AB11_RS00070;Name=AB11_RS00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00070;old_locus_tag=AB11_4882;pseudo=true NZ_JHDH01000001.1 Protein Homology CDS 8668 9185 . + 0 ID=cds-AB11_RS00070;Parent=gene-AB11_RS00070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AB11_RS00070;product=DUF1380 family protein;pseudo=true;transl_table=11 NZ_JHDH01000001.1 RefSeq gene 9236 10006 . + . ID=gene-AB11_RS25120;Name=AB11_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25120;old_locus_tag=AB11_4883 NZ_JHDH01000001.1 Protein Homology CDS 9236 10006 . + 0 ID=cds-WP_032222482.1;Parent=gene-AB11_RS25120;Dbxref=GenBank:WP_032222482.1;Name=WP_032222482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AB11_RS25120;product=hypothetical protein;protein_id=WP_032222482.1;transl_table=11 ##sequence-region NZ_JHDH01000002.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000002.1 RefSeq region 1 447 . + . ID=NZ_JHDH01000002.1:1..447;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000002.1 RefSeq gene 1 447 . + . ID=gene-AB11_RS00085;Name=AB11_RS00085;end_range=447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00085;old_locus_tag=AB11_4884;partial=true;start_range=.,1 NZ_JHDH01000002.1 Protein Homology CDS 1 447 . + 2 ID=cds-WP_032222487.1;Parent=gene-AB11_RS00085;Dbxref=GenBank:WP_032222487.1;Name=WP_032222487.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;end_range=447,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310193.1;locus_tag=AB11_RS00085;partial=true;product=phage tail tape measure protein;protein_id=WP_032222487.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000003.1 1 3030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000003.1 RefSeq region 1 3030 . + . ID=NZ_JHDH01000003.1:1..3030;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000003.1 RefSeq gene 1 223 . - . ID=gene-AB11_RS00090;Name=AB11_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00090;old_locus_tag=AB11_4885;partial=true;start_range=.,1 NZ_JHDH01000003.1 Protein Homology CDS 1 223 . - 0 ID=cds-WP_032222490.1;Parent=gene-AB11_RS00090;Dbxref=GenBank:WP_032222490.1;Name=WP_032222490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS00090;partial=true;product=ISAs1 family transposase;protein_id=WP_032222490.1;start_range=.,1;transl_table=11 NZ_JHDH01000003.1 RefSeq pseudogene 327 1453 . - . ID=gene-AB11_RS00095;Name=AB11_RS00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00095;pseudo=true NZ_JHDH01000003.1 Protein Homology CDS 327 1453 . - 0 ID=cds-AB11_RS00095;Parent=gene-AB11_RS00095;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027427.1;locus_tag=AB11_RS00095;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000003.1 RefSeq gene 1535 1720 . + . ID=gene-AB11_RS00100;Name=AB11_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00100 NZ_JHDH01000003.1 Protein Homology CDS 1535 1720 . + 0 ID=cds-WP_120795385.1;Parent=gene-AB11_RS00100;Dbxref=GenBank:WP_120795385.1;Name=WP_120795385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518780.1;locus_tag=AB11_RS00100;product=protein YncO;protein_id=WP_120795385.1;transl_table=11 NZ_JHDH01000003.1 RefSeq gene 1635 2117 . - . ID=gene-AB11_RS25670;Name=AB11_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25670;old_locus_tag=AB11_4887 NZ_JHDH01000003.1 Protein Homology CDS 1635 2117 . - 0 ID=cds-WP_000939263.1;Parent=gene-AB11_RS25670;Dbxref=GenBank:WP_000939263.1;Name=WP_000939263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415974.1;locus_tag=AB11_RS25670;product=YdcD family protein;protein_id=WP_000939263.1;transl_table=11 NZ_JHDH01000003.1 RefSeq gene 2101 3030 . - . ID=gene-AB11_RS00110;Name=AB11_RS00110;end_range=3030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00110;old_locus_tag=AB11_4888;partial=true NZ_JHDH01000003.1 Protein Homology CDS 2101 3030 . - 0 ID=cds-WP_032222492.1;Parent=gene-AB11_RS00110;Dbxref=GenBank:WP_032222492.1;Name=WP_032222492.1;end_range=3030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=AB11_RS00110;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032222492.1;transl_table=11 ##sequence-region NZ_JHDH01000004.1 1 3260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000004.1 RefSeq region 1 3260 . + . ID=NZ_JHDH01000004.1:1..3260;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000004.1 RefSeq gene 1 3260 . - . ID=gene-AB11_RS00115;Name=rhsB;end_range=3260,.;gbkey=Gene;gene=rhsB;gene_biotype=protein_coding;locus_tag=AB11_RS00115;old_locus_tag=AB11_4889;partial=true;start_range=.,1 NZ_JHDH01000004.1 Protein Homology CDS 1 3260 . - 0 ID=cds-WP_032222496.1;Parent=gene-AB11_RS00115;Dbxref=GenBank:WP_032222496.1;Name=WP_032222496.1;end_range=3260,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB11_RS00115;partial=true;product=rhs element protein RhsB;protein_id=WP_032222496.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000005.1 1 2170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000005.1 RefSeq region 1 2170 . + . ID=NZ_JHDH01000005.1:1..2170;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000005.1 RefSeq gene 1 2149 . - . ID=gene-AB11_RS00120;Name=AB11_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00120;old_locus_tag=AB11_4890;partial=true;start_range=.,1 NZ_JHDH01000005.1 Protein Homology CDS 1 2149 . - 0 ID=cds-WP_032222501.1;Parent=gene-AB11_RS00120;Dbxref=GenBank:WP_032222501.1;Name=WP_032222501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS00120;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_032222501.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000006.1 1 8042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000006.1 RefSeq region 1 8042 . + . ID=NZ_JHDH01000006.1:1..8042;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000006.1 RefSeq gene 1 1396 . + . ID=gene-AB11_RS00125;Name=AB11_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00125;old_locus_tag=AB11_4891;partial=true;start_range=.,1 NZ_JHDH01000006.1 Protein Homology CDS 1 1396 . + 1 ID=cds-WP_032222505.1;Parent=gene-AB11_RS00125;Dbxref=GenBank:WP_032222505.1;Name=WP_032222505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781912.1;locus_tag=AB11_RS00125;partial=true;product=GA-like domain-containing protein;protein_id=WP_032222505.1;start_range=.,1;transl_table=11 NZ_JHDH01000006.1 RefSeq gene 1455 3323 . + . ID=gene-AB11_RS00130;Name=AB11_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00130;old_locus_tag=AB11_4892 NZ_JHDH01000006.1 Protein Homology CDS 1455 3323 . + 0 ID=cds-WP_001774398.1;Parent=gene-AB11_RS00130;Dbxref=GenBank:WP_001774398.1;Name=WP_001774398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774398.1;locus_tag=AB11_RS00130;product=hypothetical protein;protein_id=WP_001774398.1;transl_table=11 NZ_JHDH01000006.1 RefSeq gene 3906 4166 . + . ID=gene-AB11_RS25415;Name=AB11_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25415 NZ_JHDH01000006.1 Protein Homology CDS 3906 4166 . + 0 ID=cds-WP_241219300.1;Parent=gene-AB11_RS25415;Dbxref=GenBank:WP_241219300.1;Name=WP_241219300.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=AB11_RS25415;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_241219300.1;transl_table=11 NZ_JHDH01000006.1 RefSeq gene 4325 5116 . - . ID=gene-AB11_RS00140;Name=AB11_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00140;old_locus_tag=AB11_4894 NZ_JHDH01000006.1 Protein Homology CDS 4325 5116 . - 0 ID=cds-WP_001774400.1;Parent=gene-AB11_RS00140;Dbxref=GenBank:WP_001774400.1;Name=WP_001774400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000977390.1;locus_tag=AB11_RS00140;product=DUF4198 domain-containing protein;protein_id=WP_001774400.1;transl_table=11 NZ_JHDH01000006.1 RefSeq gene 5135 7105 . - . ID=gene-AB11_RS00145;Name=AB11_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00145;old_locus_tag=AB11_4895 NZ_JHDH01000006.1 Protein Homology CDS 5135 7105 . - 0 ID=cds-WP_001774401.1;Parent=gene-AB11_RS00145;Dbxref=GenBank:WP_001774401.1;Name=WP_001774401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555799.1;locus_tag=AB11_RS00145;product=TonB-dependent receptor domain-containing protein;protein_id=WP_001774401.1;transl_table=11 NZ_JHDH01000006.1 RefSeq pseudogene 7587 8042 . + . ID=gene-AB11_RS00150;Name=AB11_RS00150;end_range=8042,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00150;old_locus_tag=AB11_4896;partial=true;pseudo=true NZ_JHDH01000006.1 Protein Homology CDS 7587 8042 . + 0 ID=cds-AB11_RS00150;Parent=gene-AB11_RS00150;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8042,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AB11_RS00150;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000007.1 1 6578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000007.1 RefSeq region 1 6578 . + . ID=NZ_JHDH01000007.1:1..6578;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000007.1 RefSeq pseudogene 1 896 . - . ID=gene-AB11_RS00155;Name=AB11_RS00155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00155;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000007.1 Protein Homology CDS 1 896 . - 0 ID=cds-AB11_RS00155;Parent=gene-AB11_RS00155;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB11_RS00155;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000007.1 RefSeq pseudogene 1103 1417 . + . ID=gene-AB11_RS25420;Name=AB11_RS25420;end_range=1417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25420;partial=true;pseudo=true NZ_JHDH01000007.1 Protein Homology CDS 1103 1417 . + 0 ID=cds-AB11_RS25420;Parent=gene-AB11_RS25420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1417,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018516.6;locus_tag=AB11_RS25420;partial=true;product=type VI secretion system ImpA family N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000007.1 RefSeq pseudogene 1751 1927 . + . ID=gene-AB11_RS25425;Name=AB11_RS25425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25425;partial=true;pseudo=true;start_range=.,1751 NZ_JHDH01000007.1 Protein Homology CDS 1751 1927 . + 0 ID=cds-AB11_RS25425;Parent=gene-AB11_RS25425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AB11_RS25425;partial=true;product=POTRA domain-containing protein;pseudo=true;start_range=.,1751;transl_table=11 NZ_JHDH01000007.1 RefSeq gene 2168 4849 . + . ID=gene-AB11_RS00165;Name=AB11_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00165;old_locus_tag=AB11_4900 NZ_JHDH01000007.1 Protein Homology CDS 2168 4849 . + 0 ID=cds-WP_170871955.1;Parent=gene-AB11_RS00165;Dbxref=GenBank:WP_170871955.1;Name=WP_170871955.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=AB11_RS00165;product=AAA domain-containing protein;protein_id=WP_170871955.1;transl_table=11 NZ_JHDH01000007.1 RefSeq pseudogene 5350 6084 . + . ID=gene-AB11_RS00170;Name=AB11_RS00170;end_range=6084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00170;old_locus_tag=AB11_4901;partial=true;pseudo=true NZ_JHDH01000007.1 Protein Homology CDS 5350 6084 . + 0 ID=cds-AB11_RS00170;Parent=gene-AB11_RS00170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=6084,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309413.1;locus_tag=AB11_RS00170;partial=true;product=phosphoadenosine phosphosulfate reductase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000007.1 RefSeq pseudogene 6077 6578 . - . ID=gene-AB11_RS00175;Name=AB11_RS00175;end_range=6578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00175;partial=true;pseudo=true;start_range=.,6077 NZ_JHDH01000007.1 Protein Homology CDS 6077 6578 . - 2 ID=cds-AB11_RS00175;Parent=gene-AB11_RS00175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6578,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611435.1;locus_tag=AB11_RS00175;partial=true;product=transposase;pseudo=true;start_range=.,6077;transl_table=11 ##sequence-region NZ_JHDH01000008.1 1 2122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000008.1 RefSeq region 1 2122 . + . ID=NZ_JHDH01000008.1:1..2122;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000008.1 RefSeq pseudogene 1 2122 . + . ID=gene-AB11_RS00180;Name=AB11_RS00180;end_range=2122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00180;old_locus_tag=AB11_4903;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000008.1 Protein Homology CDS 1 2122 . + 2 ID=cds-AB11_RS00180;Parent=gene-AB11_RS00180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS00180;partial=true;product=adhesin;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000009.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000009.1 RefSeq region 1 613 . + . ID=NZ_JHDH01000009.1:1..613;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000010.1 1 8626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000010.1 RefSeq region 1 8626 . + . ID=NZ_JHDH01000010.1:1..8626;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000010.1 RefSeq gene 52 756 . + . ID=gene-AB11_RS00190;Name=AB11_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00190;old_locus_tag=AB11_4905 NZ_JHDH01000010.1 Protein Homology CDS 52 756 . + 0 ID=cds-WP_001067855.1;Parent=gene-AB11_RS00190;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB11_RS00190;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 818 1525 . + . ID=gene-AB11_RS00195;Name=AB11_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00195;old_locus_tag=AB11_4906 NZ_JHDH01000010.1 Protein Homology CDS 818 1525 . + 0 ID=cds-WP_000880559.1;Parent=gene-AB11_RS00195;Dbxref=GenBank:WP_000880559.1;Name=WP_000880559.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.6;locus_tag=AB11_RS00195;product=helicase RepA family protein;protein_id=WP_000880559.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 1512 2363 . + . ID=gene-AB11_RS00200;Name=repC;gbkey=Gene;gene=repC;gene_biotype=protein_coding;locus_tag=AB11_RS00200;old_locus_tag=AB11_4907 NZ_JHDH01000010.1 Protein Homology CDS 1512 2363 . + 0 ID=cds-WP_000240536.1;Parent=gene-AB11_RS00200;Dbxref=GenBank:WP_000240536.1;Name=WP_000240536.1;gbkey=CDS;gene=repC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240539.1;locus_tag=AB11_RS00200;product=replication protein C%2C IncQ-type;protein_id=WP_000240536.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 2671 3486 . + . ID=gene-AB11_RS00210;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=AB11_RS00210;old_locus_tag=AB11_4908 NZ_JHDH01000010.1 Protein Homology CDS 2671 3486 . + 0 ID=cds-WP_001043265.1;Parent=gene-AB11_RS00210;Dbxref=GenBank:WP_001043265.1;Name=WP_001043265.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=AB11_RS00210;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043265.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 3547 4350 . + . ID=gene-AB11_RS00215;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AB11_RS00215;old_locus_tag=AB11_4909 NZ_JHDH01000010.1 Protein Homology CDS 3547 4350 . + 0 ID=cds-WP_001082319.1;Parent=gene-AB11_RS00215;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AB11_RS00215;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 4350 5186 . + . ID=gene-AB11_RS00220;Name=AB11_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00220;old_locus_tag=AB11_4910 NZ_JHDH01000010.1 Protein Homology CDS 4350 5186 . + 0 ID=cds-WP_000480968.1;Parent=gene-AB11_RS00220;Dbxref=GenBank:WP_000480968.1;Name=WP_000480968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AB11_RS00220;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480968.1;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 5247 5951 . - . ID=gene-AB11_RS00225;Name=AB11_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00225;old_locus_tag=AB11_4911 NZ_JHDH01000010.1 Protein Homology CDS 5247 5951 . - 0 ID=cds-WP_001067855.1-2;Parent=gene-AB11_RS00225;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB11_RS00225;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JHDH01000010.1 RefSeq pseudogene 6014 6268 . + . ID=gene-AB11_RS00230;Name=AB11_RS00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00230;partial=true;pseudo=true;start_range=.,6014 NZ_JHDH01000010.1 Protein Homology CDS 6014 6268 . + 0 ID=cds-AB11_RS00230;Parent=gene-AB11_RS00230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AB11_RS00230;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,6014;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 6451 7311 . + . ID=gene-AB11_RS00235;Name=AB11_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00235;old_locus_tag=AB11_4914 NZ_JHDH01000010.1 Protein Homology CDS 6451 7311 . + 0 ID=cds-WP_000027057.1;Parent=gene-AB11_RS00235;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB11_RS00235;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JHDH01000010.1 RefSeq pseudogene 7470 7739 . + . ID=gene-AB11_RS00240;Name=AB11_RS00240;end_range=7739,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00240;partial=true;pseudo=true;start_range=.,7470 NZ_JHDH01000010.1 Protein Homology CDS 7470 7739 . + 0 ID=cds-AB11_RS00240;Parent=gene-AB11_RS00240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_390483904.1;locus_tag=AB11_RS00240;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,7470;transl_table=11 NZ_JHDH01000010.1 RefSeq gene 7909 8613 . + . ID=gene-AB11_RS00245;Name=AB11_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00245;old_locus_tag=AB11_4916 NZ_JHDH01000010.1 Protein Homology CDS 7909 8613 . + 0 ID=cds-WP_001067855.1-3;Parent=gene-AB11_RS00245;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB11_RS00245;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_JHDH01000011.1 1 8664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000011.1 RefSeq region 1 8664 . + . ID=NZ_JHDH01000011.1:1..8664;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000011.1 RefSeq gene 1 958 . + . ID=gene-AB11_RS00250;Name=AB11_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00250;old_locus_tag=AB11_4917;partial=true;start_range=.,1 NZ_JHDH01000011.1 Protein Homology CDS 1 958 . + 1 ID=cds-WP_032222538.1;Parent=gene-AB11_RS00250;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS00250;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;start_range=.,1;transl_table=11 NZ_JHDH01000011.1 RefSeq gene 1956 2243 . - . ID=gene-AB11_RS25430;Name=AB11_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25430 NZ_JHDH01000011.1 Protein Homology CDS 1956 2243 . - 0 ID=cds-WP_001021473.1;Parent=gene-AB11_RS25430;Dbxref=GenBank:WP_001021473.1;Name=WP_001021473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021472.1;locus_tag=AB11_RS25430;product=hypothetical protein;protein_id=WP_001021473.1;transl_table=11 NZ_JHDH01000011.1 RefSeq gene 2243 2503 . - . ID=gene-AB11_RS00260;Name=AB11_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00260 NZ_JHDH01000011.1 Protein Homology CDS 2243 2503 . - 0 ID=cds-WP_000889443.1;Parent=gene-AB11_RS00260;Dbxref=GenBank:WP_000889443.1;Name=WP_000889443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889444.1;locus_tag=AB11_RS00260;product=hypothetical protein;protein_id=WP_000889443.1;transl_table=11 NZ_JHDH01000011.1 RefSeq gene 2536 7053 . - . ID=gene-AB11_RS00265;Name=AB11_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00265;old_locus_tag=AB11_4919 NZ_JHDH01000011.1 Protein Homology CDS 2536 7053 . - 0 ID=cds-WP_001556467.1;Parent=gene-AB11_RS00265;Dbxref=GenBank:WP_001556467.1;Name=WP_001556467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001470092.1;locus_tag=AB11_RS00265;product=RHS repeat-associated core domain-containing protein;protein_id=WP_001556467.1;transl_table=11 NZ_JHDH01000011.1 RefSeq gene 7073 7534 . - . ID=gene-AB11_RS00270;Name=AB11_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00270;old_locus_tag=AB11_4920 NZ_JHDH01000011.1 Protein Homology CDS 7073 7534 . - 0 ID=cds-WP_001160804.1;Parent=gene-AB11_RS00270;Dbxref=GenBank:WP_001160804.1;Name=WP_001160804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=AB11_RS00270;product=DcrB-related protein;protein_id=WP_001160804.1;transl_table=11 NZ_JHDH01000011.1 RefSeq gene 7562 8664 . - . ID=gene-AB11_RS00275;Name=tssI;end_range=8664,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AB11_RS00275;old_locus_tag=AB11_4921;partial=true NZ_JHDH01000011.1 Protein Homology CDS 7562 8664 . - 2 ID=cds-WP_032222541.1;Parent=gene-AB11_RS00275;Dbxref=GenBank:WP_032222541.1;Name=WP_032222541.1;Ontology_term=GO:0033103;end_range=8664,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AB11_RS00275;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032222541.1;transl_table=11 ##sequence-region NZ_JHDH01000012.1 1 1098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000012.1 RefSeq region 1 1098 . + . ID=NZ_JHDH01000012.1:1..1098;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000014.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000014.1 RefSeq region 1 476 . + . ID=NZ_JHDH01000014.1:1..476;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000014.1 RefSeq gene 177 252 . - . ID=gene-AB11_RS00285;Name=AB11_RS00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00285;old_locus_tag=AB11_4927 NZ_JHDH01000014.1 tRNAscan-SE tRNA 177 252 . - . ID=rna-AB11_RS00285;Parent=gene-AB11_RS00285;anticodon=(pos:complement(217..219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00285;product=tRNA-Lys NZ_JHDH01000014.1 tRNAscan-SE exon 177 252 . - . ID=exon-AB11_RS00285-1;Parent=rna-AB11_RS00285;anticodon=(pos:complement(217..219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00285;product=tRNA-Lys NZ_JHDH01000014.1 RefSeq gene 255 330 . - . ID=gene-AB11_RS00290;Name=AB11_RS00290;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00290;old_locus_tag=AB11_4928 NZ_JHDH01000014.1 tRNAscan-SE tRNA 255 330 . - . ID=rna-AB11_RS00290;Parent=gene-AB11_RS00290;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00290;product=tRNA-Val NZ_JHDH01000014.1 tRNAscan-SE exon 255 330 . - . ID=exon-AB11_RS00290-1;Parent=rna-AB11_RS00290;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00290;product=tRNA-Val NZ_JHDH01000014.1 RefSeq gene 377 452 . - . ID=gene-AB11_RS00295;Name=AB11_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00295;old_locus_tag=AB11_4929 NZ_JHDH01000014.1 tRNAscan-SE tRNA 377 452 . - . ID=rna-AB11_RS00295;Parent=gene-AB11_RS00295;anticodon=(pos:complement(417..419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00295;product=tRNA-Val NZ_JHDH01000014.1 tRNAscan-SE exon 377 452 . - . ID=exon-AB11_RS00295-1;Parent=rna-AB11_RS00295;anticodon=(pos:complement(417..419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00295;product=tRNA-Val ##sequence-region NZ_JHDH01000015.1 1 5786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000015.1 RefSeq region 1 5786 . + . ID=NZ_JHDH01000015.1:1..5786;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000015.1 RefSeq gene 1 813 . + . ID=gene-AB11_RS00300;Name=AB11_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00300;old_locus_tag=AB11_4930;partial=true;start_range=.,1 NZ_JHDH01000015.1 Protein Homology CDS 1 813 . + 0 ID=cds-WP_032222555.1;Parent=gene-AB11_RS00300;Dbxref=GenBank:WP_032222555.1;Name=WP_032222555.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB11_RS00300;partial=true;product=IS3-like element IS600 family transposase;protein_id=WP_032222555.1;start_range=.,1;transl_table=11 NZ_JHDH01000015.1 RefSeq gene 967 2964 . + . ID=gene-AB11_RS00305;Name=AB11_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00305;old_locus_tag=AB11_4931 NZ_JHDH01000015.1 Protein Homology CDS 967 2964 . + 0 ID=cds-WP_001541890.1;Parent=gene-AB11_RS00305;Dbxref=GenBank:WP_001541890.1;Name=WP_001541890.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AB11_RS00305;product=BCCT family transporter;protein_id=WP_001541890.1;transl_table=11 NZ_JHDH01000015.1 RefSeq gene 3027 4304 . + . ID=gene-AB11_RS00310;Name=AB11_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00310;old_locus_tag=AB11_4932 NZ_JHDH01000015.1 Protein Homology CDS 3027 4304 . + 0 ID=cds-WP_021570939.1;Parent=gene-AB11_RS00310;Dbxref=GenBank:WP_021570939.1;Name=WP_021570939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AB11_RS00310;product=DUF2254 domain-containing protein;protein_id=WP_021570939.1;transl_table=11 NZ_JHDH01000015.1 RefSeq gene 4552 5196 . + . ID=gene-AB11_RS00315;Name=acuR;gbkey=Gene;gene=acuR;gene_biotype=protein_coding;locus_tag=AB11_RS00315;old_locus_tag=AB11_4933 NZ_JHDH01000015.1 Protein Homology CDS 4552 5196 . + 0 ID=cds-WP_032222557.1;Parent=gene-AB11_RS00315;Dbxref=GenBank:WP_032222557.1;Name=WP_032222557.1;gbkey=CDS;gene=acuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145477.1;locus_tag=AB11_RS00315;product=acrylate utilization transcriptional regulator AcuR;protein_id=WP_032222557.1;transl_table=11 NZ_JHDH01000015.1 RefSeq pseudogene 5193 5786 . - . ID=gene-AB11_RS00320;Name=AB11_RS00320;end_range=5786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00320;old_locus_tag=AB11_4934;partial=true;pseudo=true NZ_JHDH01000015.1 Protein Homology CDS 5193 5786 . - 0 ID=cds-AB11_RS00320;Parent=gene-AB11_RS00320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5786,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS00320;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000016.1 1 2435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000016.1 RefSeq region 1 2435 . + . ID=NZ_JHDH01000016.1:1..2435;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000016.1 RefSeq pseudogene 1 1345 . + . ID=gene-AB11_RS25125;Name=rhsC;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AB11_RS25125;old_locus_tag=AB11_4935;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000016.1 Protein Homology CDS 1 1345 . + 1 ID=cds-AB11_RS25125;Parent=gene-AB11_RS25125;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB11_RS25125;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000016.1 RefSeq gene 1345 1671 . + . ID=gene-AB11_RS00335;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;locus_tag=AB11_RS00335 NZ_JHDH01000016.1 Protein Homology CDS 1345 1671 . + 0 ID=cds-WP_000873944.1;Parent=gene-AB11_RS00335;Dbxref=GenBank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AB11_RS00335;product=protein YbfB;protein_id=WP_000873944.1;transl_table=11 NZ_JHDH01000016.1 RefSeq pseudogene 1702 2435 . + . ID=gene-AB11_RS00340;Name=AB11_RS00340;end_range=2435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00340;old_locus_tag=AB11_4936;partial=true;pseudo=true;start_range=.,1702 NZ_JHDH01000016.1 Protein Homology CDS 1702 2435 . + 0 ID=cds-AB11_RS00340;Parent=gene-AB11_RS00340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB11_RS00340;partial=true;product=RHS element protein;pseudo=true;start_range=.,1702;transl_table=11 ##sequence-region NZ_JHDH01000017.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000017.1 RefSeq region 1 509 . + . ID=NZ_JHDH01000017.1:1..509;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000018.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000018.1 RefSeq region 1 314 . + . ID=NZ_JHDH01000018.1:1..314;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000019.1 1 1925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000019.1 RefSeq region 1 1925 . + . ID=NZ_JHDH01000019.1:1..1925;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000019.1 RefSeq pseudogene 1 397 . - . ID=gene-AB11_RS00345;Name=AB11_RS00345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00345;old_locus_tag=AB11_4938;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000019.1 Protein Homology CDS 1 397 . - 0 ID=cds-AB11_RS00345;Parent=gene-AB11_RS00345;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS00345;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000019.1 RefSeq gene 567 1544 . + . ID=gene-AB11_RS00350;Name=AB11_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00350;old_locus_tag=AB11_4939 NZ_JHDH01000019.1 GeneMarkS-2+ CDS 567 1544 . + 0 ID=cds-WP_077699265.1;Parent=gene-AB11_RS00350;Dbxref=GenBank:WP_077699265.1;Name=WP_077699265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS00350;product=integrase;protein_id=WP_077699265.1;transl_table=11 NZ_JHDH01000019.1 RefSeq gene 1620 1925 . + . ID=gene-AB11_RS00355;Name=AB11_RS00355;end_range=1925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00355;old_locus_tag=AB11_4940;partial=true NZ_JHDH01000019.1 Protein Homology CDS 1620 1925 . + 0 ID=cds-WP_000567743.1;Parent=gene-AB11_RS00355;Dbxref=GenBank:WP_000567743.1;Name=WP_000567743.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1925,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS00355;partial=true;product=transposase;protein_id=WP_000567743.1;transl_table=11 ##sequence-region NZ_JHDH01000020.1 1 3653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000020.1 RefSeq region 1 3653 . + . ID=NZ_JHDH01000020.1:1..3653;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000020.1 RefSeq gene 22 3653 . + . ID=gene-AB11_RS00360;Name=AB11_RS00360;end_range=3653,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00360;old_locus_tag=AB11_4941;partial=true NZ_JHDH01000020.1 Protein Homology CDS 22 3653 . + 0 ID=cds-WP_032222582.1;Parent=gene-AB11_RS00360;Dbxref=GenBank:WP_032222582.1;Name=WP_032222582.1;end_range=3653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS00360;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_032222582.1;transl_table=11 ##sequence-region NZ_JHDH01000021.1 1 1941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000021.1 RefSeq region 1 1941 . + . ID=NZ_JHDH01000021.1:1..1941;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000021.1 RefSeq gene 1 80 . - . ID=gene-AB11_RS00365;Name=AB11_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00365;old_locus_tag=AB11_4942;partial=true;start_range=.,1 NZ_JHDH01000021.1 Protein Homology CDS 1 80 . - 0 ID=cds-WP_141116835.1;Parent=gene-AB11_RS00365;Dbxref=GenBank:WP_141116835.1;Name=WP_141116835.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB11_RS00365;partial=true;product=ArsB/NhaD family transporter;protein_id=WP_141116835.1;start_range=.,1;transl_table=11 NZ_JHDH01000021.1 RefSeq gene 134 487 . - . ID=gene-AB11_RS00370;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB11_RS00370;old_locus_tag=AB11_4943 NZ_JHDH01000021.1 Protein Homology CDS 134 487 . - 0 ID=cds-WP_000008957.1;Parent=gene-AB11_RS00370;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB11_RS00370;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JHDH01000021.1 RefSeq gene 1227 1310 . + . ID=gene-AB11_RS00375;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB11_RS00375;old_locus_tag=AB11_4945 NZ_JHDH01000021.1 Protein Homology CDS 1227 1310 . + 0 ID=cds-WP_001295215.1;Parent=gene-AB11_RS00375;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AB11_RS00375;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JHDH01000021.1 RefSeq gene 1364 1941 . - . ID=gene-AB11_RS00380;Name=AB11_RS00380;end_range=1941,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00380;old_locus_tag=AB11_4946;partial=true NZ_JHDH01000021.1 Protein Homology CDS 1364 1941 . - 2 ID=cds-WP_032222586.1;Parent=gene-AB11_RS00380;Dbxref=GenBank:WP_032222586.1;Name=WP_032222586.1;Ontology_term=GO:0016491;end_range=1941,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AB11_RS00380;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_032222586.1;transl_table=11 ##sequence-region NZ_JHDH01000022.1 1 1622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000022.1 RefSeq region 1 1622 . + . ID=NZ_JHDH01000022.1:1..1622;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000022.1 RefSeq pseudogene 1 391 . + . ID=gene-AB11_RS00385;Name=AB11_RS00385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00385;old_locus_tag=AB11_4947;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000022.1 Protein Homology CDS 1 391 . + 1 ID=cds-AB11_RS00385;Parent=gene-AB11_RS00385;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AB11_RS00385;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000022.1 RefSeq gene 388 1374 . + . ID=gene-AB11_RS00390;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AB11_RS00390;old_locus_tag=AB11_4948 NZ_JHDH01000022.1 Protein Homology CDS 388 1374 . + 0 ID=cds-WP_021570754.1;Parent=gene-AB11_RS00390;Dbxref=GenBank:WP_021570754.1;Name=WP_021570754.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AB11_RS00390;product=protein YcdU;protein_id=WP_021570754.1;transl_table=11 ##sequence-region NZ_JHDH01000023.1 1 2020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000023.1 RefSeq region 1 2020 . + . ID=NZ_JHDH01000023.1:1..2020;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000023.1 RefSeq gene 1 886 . + . ID=gene-AB11_RS00395;Name=AB11_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00395;old_locus_tag=AB11_4949;partial=true;start_range=.,1 NZ_JHDH01000023.1 Protein Homology CDS 1 886 . + 1 ID=cds-WP_032222593.1;Parent=gene-AB11_RS00395;Dbxref=GenBank:WP_032222593.1;Name=WP_032222593.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AB11_RS00395;partial=true;product=fimbrial protein;protein_id=WP_032222593.1;start_range=.,1;transl_table=11 NZ_JHDH01000023.1 RefSeq gene 898 1440 . + . ID=gene-AB11_RS00400;Name=AB11_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00400;old_locus_tag=AB11_4950 NZ_JHDH01000023.1 Protein Homology CDS 898 1440 . + 0 ID=cds-WP_000730614.1;Parent=gene-AB11_RS00400;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AB11_RS00400;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JHDH01000023.1 RefSeq gene 1448 1963 . + . ID=gene-AB11_RS00405;Name=AB11_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00405;old_locus_tag=AB11_4951 NZ_JHDH01000023.1 Protein Homology CDS 1448 1963 . + 0 ID=cds-WP_000919497.1;Parent=gene-AB11_RS00405;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AB11_RS00405;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JHDH01000023.1 RefSeq pseudogene 1929 2020 . + . ID=gene-AB11_RS00410;Name=AB11_RS00410;end_range=2020,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00410;partial=true;pseudo=true NZ_JHDH01000023.1 Protein Homology CDS 1929 2020 . + 0 ID=cds-AB11_RS00410;Parent=gene-AB11_RS00410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2020,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AB11_RS00410;partial=true;product=pili assembly chaperone;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000024.1 1 1065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000024.1 RefSeq region 1 1065 . + . ID=NZ_JHDH01000024.1:1..1065;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000025.1 1 3657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000025.1 RefSeq region 1 3657 . + . ID=NZ_JHDH01000025.1:1..3657;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000025.1 RefSeq gene 1 2769 . - . ID=gene-AB11_RS00420;Name=AB11_RS00420;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS00420;partial=true;start_range=.,1 NZ_JHDH01000025.1 cmsearch rRNA 1 2769 . - . ID=rna-AB11_RS00420;Parent=gene-AB11_RS00420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS00420;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000025.1 cmsearch exon 1 2769 . - . ID=exon-AB11_RS00420-1;Parent=rna-AB11_RS00420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS00420;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000025.1 RefSeq gene 2954 3029 . - . ID=gene-AB11_RS00425;Name=AB11_RS00425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00425;old_locus_tag=AB11_4955 NZ_JHDH01000025.1 tRNAscan-SE tRNA 2954 3029 . - . ID=rna-AB11_RS00425;Parent=gene-AB11_RS00425;anticodon=(pos:complement(2993..2995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00425;product=tRNA-Glu NZ_JHDH01000025.1 tRNAscan-SE exon 2954 3029 . - . ID=exon-AB11_RS00425-1;Parent=rna-AB11_RS00425;anticodon=(pos:complement(2993..2995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00425;product=tRNA-Glu NZ_JHDH01000025.1 RefSeq gene 3201 3657 . - . ID=gene-AB11_RS00430;Name=AB11_RS00430;end_range=3657,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS00430;partial=true NZ_JHDH01000025.1 cmsearch rRNA 3201 3657 . - . ID=rna-AB11_RS00430;Parent=gene-AB11_RS00430;Dbxref=RFAM:RF00177;end_range=3657,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS00430;partial=true;product=16S ribosomal RNA NZ_JHDH01000025.1 cmsearch exon 3201 3657 . - . ID=exon-AB11_RS00430-1;Parent=rna-AB11_RS00430;Dbxref=RFAM:RF00177;end_range=3657,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS00430;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000026.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000026.1 RefSeq region 1 1130 . + . ID=NZ_JHDH01000026.1:1..1130;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000026.1 RefSeq gene 1 617 . - . ID=gene-AB11_RS00435;Name=AB11_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00435;old_locus_tag=AB11_4957;partial=true;start_range=.,1 NZ_JHDH01000026.1 Protein Homology CDS 1 617 . - 0 ID=cds-WP_001623509.1;Parent=gene-AB11_RS00435;Dbxref=GenBank:WP_001623509.1;Name=WP_001623509.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AB11_RS00435;partial=true;product=PmbA/TldA family metallopeptidase;protein_id=WP_001623509.1;start_range=.,1;transl_table=11 NZ_JHDH01000026.1 RefSeq gene 956 1130 . - . ID=gene-AB11_RS25905;Name=AB11_RS25905;end_range=1130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25905;old_locus_tag=AB11_4958;partial=true NZ_JHDH01000026.1 Protein Homology CDS 956 1130 . - 1 ID=cds-WP_077699266.1;Parent=gene-AB11_RS25905;Dbxref=GenBank:WP_077699266.1;Name=WP_077699266.1;end_range=1130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312145.1;locus_tag=AB11_RS25905;partial=true;product=YhdP family protein;protein_id=WP_077699266.1;transl_table=11 ##sequence-region NZ_JHDH01000027.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000027.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000027.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000027.1 RefSeq gene 1 789 . - . ID=gene-AB11_RS00445;Name=AB11_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00445;old_locus_tag=AB11_4959;partial=true;start_range=.,1 NZ_JHDH01000027.1 Protein Homology CDS 1 789 . - 0 ID=cds-WP_021554688.1;Parent=gene-AB11_RS00445;Dbxref=GenBank:WP_021554688.1;Name=WP_021554688.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB11_RS00445;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=WP_021554688.1;start_range=.,1;transl_table=11 NZ_JHDH01000027.1 RefSeq gene 1264 2047 . - . ID=gene-AB11_RS00450;Name=argE;end_range=2047,.;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AB11_RS00450;old_locus_tag=AB11_4960;partial=true NZ_JHDH01000027.1 Protein Homology CDS 1264 2047 . - 1 ID=cds-WP_032181191.1;Parent=gene-AB11_RS00450;Dbxref=GenBank:WP_032181191.1;Name=WP_032181191.1;Ontology_term=GO:0006526,GO:0019213;end_range=2047,.;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AB11_RS00450;partial=true;product=acetylornithine deacetylase;protein_id=WP_032181191.1;transl_table=11 ##sequence-region NZ_JHDH01000028.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000028.1 RefSeq region 1 415 . + . ID=NZ_JHDH01000028.1:1..415;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000029.1 1 1967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000029.1 RefSeq region 1 1967 . + . ID=NZ_JHDH01000029.1:1..1967;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000029.1 RefSeq gene 1 917 . + . ID=gene-AB11_RS00455;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AB11_RS00455;old_locus_tag=AB11_4961;partial=true;start_range=.,1 NZ_JHDH01000029.1 Protein Homology CDS 1 917 . + 2 ID=cds-WP_032176865.1;Parent=gene-AB11_RS00455;Dbxref=GenBank:WP_032176865.1;Name=WP_032176865.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AB11_RS00455;partial=true;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_032176865.1;start_range=.,1;transl_table=11 NZ_JHDH01000029.1 RefSeq gene 1218 1304 . + . ID=gene-AB11_RS00460;Name=AB11_RS00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00460;old_locus_tag=AB11_4962 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1218 1304 . + . ID=rna-AB11_RS00460;Parent=gene-AB11_RS00460;anticodon=(pos:1252..1254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00460;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1218 1304 . + . ID=exon-AB11_RS00460-1;Parent=rna-AB11_RS00460;anticodon=(pos:1252..1254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00460;product=tRNA-Leu NZ_JHDH01000029.1 RefSeq gene 1333 1419 . + . ID=gene-AB11_RS00465;Name=AB11_RS00465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00465;old_locus_tag=AB11_4963 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1333 1419 . + . ID=rna-AB11_RS00465;Parent=gene-AB11_RS00465;anticodon=(pos:1367..1369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00465;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1333 1419 . + . ID=exon-AB11_RS00465-1;Parent=rna-AB11_RS00465;anticodon=(pos:1367..1369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00465;product=tRNA-Leu NZ_JHDH01000029.1 RefSeq gene 1448 1534 . + . ID=gene-AB11_RS00470;Name=AB11_RS00470;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00470;old_locus_tag=AB11_4964 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1448 1534 . + . ID=rna-AB11_RS00470;Parent=gene-AB11_RS00470;anticodon=(pos:1482..1484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00470;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1448 1534 . + . ID=exon-AB11_RS00470-1;Parent=rna-AB11_RS00470;anticodon=(pos:1482..1484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00470;product=tRNA-Leu NZ_JHDH01000029.1 RefSeq gene 1563 1649 . + . ID=gene-AB11_RS00475;Name=AB11_RS00475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00475;old_locus_tag=AB11_4965 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1563 1649 . + . ID=rna-AB11_RS00475;Parent=gene-AB11_RS00475;anticodon=(pos:1597..1599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00475;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1563 1649 . + . ID=exon-AB11_RS00475-1;Parent=rna-AB11_RS00475;anticodon=(pos:1597..1599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00475;product=tRNA-Leu NZ_JHDH01000029.1 RefSeq gene 1684 1770 . + . ID=gene-AB11_RS00480;Name=AB11_RS00480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00480;old_locus_tag=AB11_4966 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1684 1770 . + . ID=rna-AB11_RS00480;Parent=gene-AB11_RS00480;anticodon=(pos:1718..1720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00480;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1684 1770 . + . ID=exon-AB11_RS00480-1;Parent=rna-AB11_RS00480;anticodon=(pos:1718..1720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00480;product=tRNA-Leu NZ_JHDH01000029.1 RefSeq gene 1799 1885 . + . ID=gene-AB11_RS00485;Name=AB11_RS00485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00485;old_locus_tag=AB11_4967 NZ_JHDH01000029.1 tRNAscan-SE tRNA 1799 1885 . + . ID=rna-AB11_RS00485;Parent=gene-AB11_RS00485;anticodon=(pos:1833..1835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00485;product=tRNA-Leu NZ_JHDH01000029.1 tRNAscan-SE exon 1799 1885 . + . ID=exon-AB11_RS00485-1;Parent=rna-AB11_RS00485;anticodon=(pos:1833..1835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00485;product=tRNA-Leu ##sequence-region NZ_JHDH01000030.1 1 1810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000030.1 RefSeq region 1 1810 . + . ID=NZ_JHDH01000030.1:1..1810;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000030.1 RefSeq pseudogene 1 281 . - . ID=gene-AB11_RS00490;Name=AB11_RS00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00490;old_locus_tag=AB11_4968;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000030.1 Protein Homology CDS 1 281 . - 0 ID=cds-AB11_RS00490;Parent=gene-AB11_RS00490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312115.2;locus_tag=AB11_RS00490;partial=true;product=isoprenoid biosynthesis glyoxalase ElbB;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000030.1 RefSeq gene 511 1810 . - . ID=gene-AB11_RS00495;Name=AB11_RS00495;end_range=1810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00495;old_locus_tag=AB11_4969;partial=true NZ_JHDH01000030.1 Protein Homology CDS 511 1810 . - 1 ID=cds-WP_032222608.1;Parent=gene-AB11_RS00495;Dbxref=GenBank:WP_032222608.1;Name=WP_032222608.1;end_range=1810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AB11_RS00495;partial=true;product=ATP-binding protein;protein_id=WP_032222608.1;transl_table=11 ##sequence-region NZ_JHDH01000031.1 1 2959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000031.1 RefSeq region 1 2959 . + . ID=NZ_JHDH01000031.1:1..2959;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000031.1 RefSeq gene 32 1401 . + . ID=gene-AB11_RS00500;Name=AB11_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00500 NZ_JHDH01000031.1 Protein Homology CDS 32 512 . + 0 ID=cds-WP_113706269.1;Parent=gene-AB11_RS00500;Dbxref=GenBank:WP_113706269.1;Name=WP_113706269.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS00500;product=IS3-like element IS150 family transposase;protein_id=WP_113706269.1;transl_table=11 NZ_JHDH01000031.1 Protein Homology CDS 512 1401 . + 2 ID=cds-WP_113706269.1;Parent=gene-AB11_RS00500;Dbxref=GenBank:WP_113706269.1;Name=WP_113706269.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS00500;product=IS3-like element IS150 family transposase;protein_id=WP_113706269.1;transl_table=11 NZ_JHDH01000031.1 RefSeq gene 1499 1651 . + . ID=gene-AB11_RS00505;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AB11_RS00505;old_locus_tag=AB11_4972 NZ_JHDH01000031.1 Protein Homology CDS 1499 1651 . + 0 ID=cds-WP_000956455.1;Parent=gene-AB11_RS00505;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AB11_RS00505;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JHDH01000031.1 RefSeq gene 1728 2840 . + . ID=gene-AB11_RS00510;Name=AB11_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00510;old_locus_tag=AB11_4973 NZ_JHDH01000031.1 Protein Homology CDS 1728 2840 . + 0 ID=cds-WP_032222612.1;Parent=gene-AB11_RS00510;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS00510;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ##sequence-region NZ_JHDH01000032.1 1 11563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000032.1 RefSeq region 1 11563 . + . ID=NZ_JHDH01000032.1:1..11563;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000032.1 RefSeq gene 188 394 . + . ID=gene-AB11_RS00515;Name=AB11_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00515;old_locus_tag=AB11_4974 NZ_JHDH01000032.1 Protein Homology CDS 188 394 . + 0 ID=cds-WP_000632607.1;Parent=gene-AB11_RS00515;Dbxref=GenBank:WP_000632607.1;Name=WP_000632607.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AB11_RS00515;product=helix-turn-helix transcriptional regulator;protein_id=WP_000632607.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 481 1083 . + . ID=gene-AB11_RS00520;Name=AB11_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00520;old_locus_tag=AB11_4975 NZ_JHDH01000032.1 Protein Homology CDS 481 1083 . + 0 ID=cds-WP_000804452.1;Parent=gene-AB11_RS00520;Dbxref=GenBank:WP_000804452.1;Name=WP_000804452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590672.1;locus_tag=AB11_RS00520;product=hypothetical protein;protein_id=WP_000804452.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 1405 2889 . - . ID=gene-AB11_RS00525;Name=AB11_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00525;old_locus_tag=AB11_4976 NZ_JHDH01000032.1 Protein Homology CDS 1405 2889 . - 0 ID=cds-WP_001297234.1;Parent=gene-AB11_RS00525;Dbxref=GenBank:WP_001297234.1;Name=WP_001297234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=AB11_RS00525;product=YfjI family protein;protein_id=WP_001297234.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 4120 4992 . + . ID=gene-AB11_RS00530;Name=AB11_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00530;old_locus_tag=AB11_4979 NZ_JHDH01000032.1 Protein Homology CDS 4120 4992 . + 0 ID=cds-WP_032222614.1;Parent=gene-AB11_RS00530;Dbxref=GenBank:WP_032222614.1;Name=WP_032222614.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AB11_RS00530;product=GTPase family protein;protein_id=WP_032222614.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 5320 8439 . + . ID=gene-AB11_RS00535;Name=agn43;gbkey=Gene;gene=agn43;gene_biotype=protein_coding;gene_synonym=flu;locus_tag=AB11_RS00535;old_locus_tag=AB11_4980 NZ_JHDH01000032.1 Protein Homology CDS 5320 8439 . + 0 ID=cds-WP_032222616.1;Parent=gene-AB11_RS00535;Dbxref=GenBank:WP_032222616.1;Name=WP_032222616.1;gbkey=CDS;gene=agn43;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AB11_RS00535;product=autotransporter adhesin Ag43;protein_id=WP_032222616.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 8560 11076 . + . ID=gene-AB11_RS00540;Name=AB11_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00540;old_locus_tag=AB11_4981 NZ_JHDH01000032.1 Protein Homology CDS 8560 11076 . + 0 ID=cds-WP_032222617.1;Parent=gene-AB11_RS00540;Dbxref=GenBank:WP_032222617.1;Name=WP_032222617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708766.2;locus_tag=AB11_RS00540;product=hypothetical protein;protein_id=WP_032222617.1;transl_table=11 NZ_JHDH01000032.1 RefSeq gene 11152 11563 . + . ID=gene-AB11_RS00545;Name=AB11_RS00545;end_range=11563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00545;old_locus_tag=AB11_4982;partial=true NZ_JHDH01000032.1 Protein Homology CDS 11152 11563 . + 0 ID=cds-WP_032222619.1;Parent=gene-AB11_RS00545;Dbxref=GenBank:WP_032222619.1;Name=WP_032222619.1;end_range=11563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708767.1;locus_tag=AB11_RS00545;partial=true;product=IrmA family protein;protein_id=WP_032222619.1;transl_table=11 ##sequence-region NZ_JHDH01000033.1 1 687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000033.1 RefSeq region 1 687 . + . ID=NZ_JHDH01000033.1:1..687;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000034.1 1 10814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000034.1 RefSeq region 1 10814 . + . ID=NZ_JHDH01000034.1:1..10814;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000034.1 RefSeq gene 147 1127 . - . ID=gene-AB11_RS00560;Name=AB11_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00560;old_locus_tag=AB11_4983 NZ_JHDH01000034.1 Protein Homology CDS 147 1127 . - 0 ID=cds-WP_000019440.1;Parent=gene-AB11_RS00560;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS00560;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 NZ_JHDH01000034.1 RefSeq pseudogene 1195 1542 . + . ID=gene-AB11_RS00565;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=pseudogene;locus_tag=AB11_RS00565;old_locus_tag=AB11_4984;partial=true;pseudo=true;start_range=.,1195 NZ_JHDH01000034.1 Protein Homology CDS 1195 1542 . + 0 ID=cds-AB11_RS00565;Parent=gene-AB11_RS00565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AB11_RS00565;partial=true;product=type II secretion system major pseudopilin GspG;pseudo=true;start_range=.,1195;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 1550 2059 . + . ID=gene-AB11_RS00570;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AB11_RS00570;old_locus_tag=AB11_4985 NZ_JHDH01000034.1 Protein Homology CDS 1550 2059 . + 0 ID=cds-WP_001076046.1;Parent=gene-AB11_RS00570;Dbxref=GenBank:WP_001076046.1;Name=WP_001076046.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AB11_RS00570;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001076046.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 2056 2433 . + . ID=gene-AB11_RS00575;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AB11_RS00575;old_locus_tag=AB11_4986 NZ_JHDH01000034.1 Protein Homology CDS 2056 2433 . + 0 ID=cds-WP_001041743.1;Parent=gene-AB11_RS00575;Dbxref=GenBank:WP_001041743.1;Name=WP_001041743.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AB11_RS00575;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 2426 3013 . + . ID=gene-AB11_RS00580;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AB11_RS00580;old_locus_tag=AB11_4987 NZ_JHDH01000034.1 Protein Homology CDS 2426 3013 . + 0 ID=cds-WP_000610634.1;Parent=gene-AB11_RS00580;Dbxref=GenBank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AB11_RS00580;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 3006 3989 . + . ID=gene-AB11_RS00585;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AB11_RS00585;old_locus_tag=AB11_4988 NZ_JHDH01000034.1 Protein Homology CDS 3006 3989 . + 0 ID=cds-WP_001058522.1;Parent=gene-AB11_RS00585;Dbxref=GenBank:WP_001058522.1;Name=WP_001058522.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AB11_RS00585;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058522.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 4004 5167 . + . ID=gene-AB11_RS00590;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AB11_RS00590;old_locus_tag=AB11_4989 NZ_JHDH01000034.1 Protein Homology CDS 4004 5167 . + 0 ID=cds-WP_001115238.1;Parent=gene-AB11_RS00590;Dbxref=GenBank:WP_001115238.1;Name=WP_001115238.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AB11_RS00590;product=type II secretion system protein GspL;protein_id=WP_001115238.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 5164 5625 . + . ID=gene-AB11_RS00595;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AB11_RS00595;old_locus_tag=AB11_4990 NZ_JHDH01000034.1 Protein Homology CDS 5164 5625 . + 0 ID=cds-WP_001295161.1;Parent=gene-AB11_RS00595;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AB11_RS00595;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 5625 6302 . + . ID=gene-AB11_RS00600;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AB11_RS00600;old_locus_tag=AB11_4991 NZ_JHDH01000034.1 Protein Homology CDS 5625 6302 . + 0 ID=cds-WP_000178161.1;Parent=gene-AB11_RS00600;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AB11_RS00600;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 6331 6807 . - . ID=gene-AB11_RS00605;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AB11_RS00605;old_locus_tag=AB11_4992 NZ_JHDH01000034.1 Protein Homology CDS 6331 6807 . - 0 ID=cds-WP_000675504.1;Parent=gene-AB11_RS00605;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AB11_RS00605;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 6879 7073 . - . ID=gene-AB11_RS00610;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AB11_RS00610;old_locus_tag=AB11_4993 NZ_JHDH01000034.1 Protein Homology CDS 6879 7073 . - 0 ID=cds-WP_000289085.1;Parent=gene-AB11_RS00610;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AB11_RS00610;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 7242 9329 . - . ID=gene-AB11_RS00615;Name=AB11_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00615;old_locus_tag=AB11_4994 NZ_JHDH01000034.1 Protein Homology CDS 7242 9329 . - 0 ID=cds-WP_023281517.1;Parent=gene-AB11_RS00615;Dbxref=GenBank:WP_023281517.1;Name=WP_023281517.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491351.1;locus_tag=AB11_RS00615;product=carbohydrate-binding protein;protein_id=WP_023281517.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 9786 9935 . - . ID=gene-AB11_RS25435;Name=AB11_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25435;old_locus_tag=AB11_4996 NZ_JHDH01000034.1 GeneMarkS-2+ CDS 9786 9935 . - 0 ID=cds-WP_233396781.1;Parent=gene-AB11_RS25435;Dbxref=GenBank:WP_233396781.1;Name=WP_233396781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25435;product=hypothetical protein;protein_id=WP_233396781.1;transl_table=11 NZ_JHDH01000034.1 RefSeq gene 10227 10814 . - . ID=gene-AB11_RS00620;Name=AB11_RS00620;end_range=10814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00620;old_locus_tag=AB11_4997;partial=true NZ_JHDH01000034.1 Protein Homology CDS 10227 10814 . - 0 ID=cds-WP_019842912.1;Parent=gene-AB11_RS00620;Dbxref=GenBank:WP_019842912.1;Name=WP_019842912.1;Ontology_term=GO:0005525;end_range=10814,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB11_RS00620;partial=true;product=EF-Tu C-terminal domain-related protein;protein_id=WP_019842912.1;transl_table=11 ##sequence-region NZ_JHDH01000035.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000035.1 RefSeq region 1 477 . + . ID=NZ_JHDH01000035.1:1..477;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000035.1 RefSeq gene 1 477 . + . ID=gene-AB11_RS00625;Name=AB11_RS00625;end_range=477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00625;old_locus_tag=AB11_4998;partial=true;start_range=.,1 NZ_JHDH01000035.1 Protein Homology CDS 1 477 . + 2 ID=cds-WP_032222626.1;Parent=gene-AB11_RS00625;Dbxref=GenBank:WP_032222626.1;Name=WP_032222626.1;end_range=477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AB11_RS00625;partial=true;product=autotransporter domain-containing protein;protein_id=WP_032222626.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000036.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000036.1 RefSeq region 1 474 . + . ID=NZ_JHDH01000036.1:1..474;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000036.1 RefSeq gene 93 168 . + . ID=gene-AB11_RS00630;Name=AB11_RS00630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00630;old_locus_tag=AB11_4999 NZ_JHDH01000036.1 tRNAscan-SE tRNA 93 168 . + . ID=rna-AB11_RS00630;Parent=gene-AB11_RS00630;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00630;product=tRNA-Val NZ_JHDH01000036.1 tRNAscan-SE exon 93 168 . + . ID=exon-AB11_RS00630-1;Parent=rna-AB11_RS00630;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00630;product=tRNA-Val NZ_JHDH01000036.1 RefSeq gene 171 246 . + . ID=gene-AB11_RS00635;Name=AB11_RS00635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00635;old_locus_tag=AB11_5000 NZ_JHDH01000036.1 tRNAscan-SE tRNA 171 246 . + . ID=rna-AB11_RS00635;Parent=gene-AB11_RS00635;anticodon=(pos:204..206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00635;product=tRNA-Lys NZ_JHDH01000036.1 tRNAscan-SE exon 171 246 . + . ID=exon-AB11_RS00635-1;Parent=rna-AB11_RS00635;anticodon=(pos:204..206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00635;product=tRNA-Lys NZ_JHDH01000036.1 RefSeq gene 298 373 . + . ID=gene-AB11_RS00640;Name=AB11_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00640;old_locus_tag=AB11_5001 NZ_JHDH01000036.1 tRNAscan-SE tRNA 298 373 . + . ID=rna-AB11_RS00640;Parent=gene-AB11_RS00640;anticodon=(pos:331..333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00640;product=tRNA-Val NZ_JHDH01000036.1 tRNAscan-SE exon 298 373 . + . ID=exon-AB11_RS00640-1;Parent=rna-AB11_RS00640;anticodon=(pos:331..333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00640;product=tRNA-Val NZ_JHDH01000036.1 RefSeq gene 377 452 . + . ID=gene-AB11_RS00645;Name=AB11_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00645;old_locus_tag=AB11_5002 NZ_JHDH01000036.1 tRNAscan-SE tRNA 377 452 . + . ID=rna-AB11_RS00645;Parent=gene-AB11_RS00645;anticodon=(pos:410..412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00645;product=tRNA-Lys NZ_JHDH01000036.1 tRNAscan-SE exon 377 452 . + . ID=exon-AB11_RS00645-1;Parent=rna-AB11_RS00645;anticodon=(pos:410..412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00645;product=tRNA-Lys ##sequence-region NZ_JHDH01000037.1 1 948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000037.1 RefSeq region 1 948 . + . ID=NZ_JHDH01000037.1:1..948;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000038.1 1 531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000038.1 RefSeq region 1 531 . + . ID=NZ_JHDH01000038.1:1..531;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000039.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000039.1 RefSeq region 1 1457 . + . ID=NZ_JHDH01000039.1:1..1457;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000039.1 RefSeq gene 147 1127 . - . ID=gene-AB11_RS00655;Name=AB11_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00655;old_locus_tag=AB11_5005 NZ_JHDH01000039.1 Protein Homology CDS 147 1127 . - 0 ID=cds-WP_000019440.1-2;Parent=gene-AB11_RS00655;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS00655;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 NZ_JHDH01000039.1 RefSeq gene 1313 1457 . + . ID=gene-AB11_RS00660;Name=AB11_RS00660;end_range=1457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00660;old_locus_tag=AB11_5006;partial=true NZ_JHDH01000039.1 Protein Homology CDS 1313 1457 . + 0 ID=cds-WP_162751854.1;Parent=gene-AB11_RS00660;Dbxref=GenBank:WP_162751854.1;Name=WP_162751854.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=1457,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS00660;partial=true;product=transposase family protein;protein_id=WP_162751854.1;transl_table=11 ##sequence-region NZ_JHDH01000040.1 1 1140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000040.1 RefSeq region 1 1140 . + . ID=NZ_JHDH01000040.1:1..1140;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000041.1 1 880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000041.1 RefSeq region 1 880 . + . ID=NZ_JHDH01000041.1:1..880;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000041.1 RefSeq gene 1 667 . + . ID=gene-AB11_RS00665;Name=AB11_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00665;old_locus_tag=AB11_5007;partial=true;start_range=.,1 NZ_JHDH01000041.1 Protein Homology CDS 1 667 . + 1 ID=cds-WP_032181287.1;Parent=gene-AB11_RS00665;Dbxref=GenBank:WP_032181287.1;Name=WP_032181287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AB11_RS00665;partial=true;product=L-arabinose isomerase family protein;protein_id=WP_032181287.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000042.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000042.1 RefSeq region 1 367 . + . ID=NZ_JHDH01000042.1:1..367;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000043.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000043.1 RefSeq region 1 456 . + . ID=NZ_JHDH01000043.1:1..456;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000044.1 1 4746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000044.1 RefSeq region 1 4746 . + . ID=NZ_JHDH01000044.1:1..4746;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000044.1 RefSeq gene 1 175 . - . ID=gene-AB11_RS00680;Name=AB11_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00680;old_locus_tag=AB11_5008;partial=true;start_range=.,1 NZ_JHDH01000044.1 Protein Homology CDS 1 175 . - 0 ID=cds-WP_001483162.1;Parent=gene-AB11_RS00680;Dbxref=GenBank:WP_001483162.1;Name=WP_001483162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS00680;partial=true;product=IS3 family transposase;protein_id=WP_001483162.1;start_range=.,1;transl_table=11 NZ_JHDH01000044.1 RefSeq gene 406 1434 . + . ID=gene-AB11_RS00685;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AB11_RS00685;old_locus_tag=AB11_5009 NZ_JHDH01000044.1 Protein Homology CDS 406 1434 . + 0 ID=cds-WP_001016699.1;Parent=gene-AB11_RS00685;Dbxref=GenBank:WP_001016699.1;Name=WP_001016699.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418403.1;locus_tag=AB11_RS00685;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016699.1;transl_table=11 NZ_JHDH01000044.1 RefSeq gene 1431 2396 . + . ID=gene-AB11_RS00690;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AB11_RS00690;old_locus_tag=AB11_5010 NZ_JHDH01000044.1 Protein Homology CDS 1431 2396 . + 0 ID=cds-WP_000654628.1;Parent=gene-AB11_RS00690;Dbxref=GenBank:WP_000654628.1;Name=WP_000654628.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418404.1;locus_tag=AB11_RS00690;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000654628.1;transl_table=11 NZ_JHDH01000044.1 RefSeq gene 2425 3375 . - . ID=gene-AB11_RS00695;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AB11_RS00695;old_locus_tag=AB11_5011 NZ_JHDH01000044.1 Protein Homology CDS 2425 3375 . - 0 ID=cds-WP_000023081.1;Parent=gene-AB11_RS00695;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AB11_RS00695;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JHDH01000044.1 RefSeq gene 3737 3812 . + . ID=gene-AB11_RS00700;Name=AB11_RS00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00700;old_locus_tag=AB11_5013 NZ_JHDH01000044.1 tRNAscan-SE tRNA 3737 3812 . + . ID=rna-AB11_RS00700;Parent=gene-AB11_RS00700;anticodon=(pos:3770..3772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00700;product=tRNA-Thr NZ_JHDH01000044.1 tRNAscan-SE exon 3737 3812 . + . ID=exon-AB11_RS00700-1;Parent=rna-AB11_RS00700;anticodon=(pos:3770..3772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00700;product=tRNA-Thr NZ_JHDH01000044.1 RefSeq gene 3821 3905 . + . ID=gene-AB11_RS00705;Name=AB11_RS00705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00705;old_locus_tag=AB11_5014 NZ_JHDH01000044.1 tRNAscan-SE tRNA 3821 3905 . + . ID=rna-AB11_RS00705;Parent=gene-AB11_RS00705;anticodon=(pos:3855..3857);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00705;product=tRNA-Tyr NZ_JHDH01000044.1 tRNAscan-SE exon 3821 3905 . + . ID=exon-AB11_RS00705-1;Parent=rna-AB11_RS00705;anticodon=(pos:3855..3857);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00705;product=tRNA-Tyr NZ_JHDH01000044.1 RefSeq gene 4022 4096 . + . ID=gene-AB11_RS00710;Name=AB11_RS00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00710;old_locus_tag=AB11_5015 NZ_JHDH01000044.1 tRNAscan-SE tRNA 4022 4096 . + . ID=rna-AB11_RS00710;Parent=gene-AB11_RS00710;anticodon=(pos:4055..4057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00710;product=tRNA-Gly NZ_JHDH01000044.1 tRNAscan-SE exon 4022 4096 . + . ID=exon-AB11_RS00710-1;Parent=rna-AB11_RS00710;anticodon=(pos:4055..4057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00710;product=tRNA-Gly NZ_JHDH01000044.1 RefSeq gene 4103 4178 . + . ID=gene-AB11_RS00715;Name=AB11_RS00715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00715;old_locus_tag=AB11_5016 NZ_JHDH01000044.1 tRNAscan-SE tRNA 4103 4178 . + . ID=rna-AB11_RS00715;Parent=gene-AB11_RS00715;anticodon=(pos:4136..4138);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00715;product=tRNA-Thr NZ_JHDH01000044.1 tRNAscan-SE exon 4103 4178 . + . ID=exon-AB11_RS00715-1;Parent=rna-AB11_RS00715;anticodon=(pos:4136..4138);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00715;product=tRNA-Thr NZ_JHDH01000044.1 RefSeq gene 4293 4746 . + . ID=gene-AB11_RS00720;Name=AB11_RS00720;end_range=4746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00720;old_locus_tag=AB11_5017;partial=true NZ_JHDH01000044.1 Protein Homology CDS 4293 4746 . + 0 ID=cds-WP_000031726.1;Parent=gene-AB11_RS00720;Dbxref=GenBank:WP_000031726.1;Name=WP_000031726.1;Ontology_term=GO:0003924,GO:0005525;end_range=4746,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB11_RS00720;partial=true;product=GTP-binding protein;protein_id=WP_000031726.1;transl_table=11 ##sequence-region NZ_JHDH01000045.1 1 2563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000045.1 RefSeq region 1 2563 . + . ID=NZ_JHDH01000045.1:1..2563;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000046.1 1 1296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000046.1 RefSeq region 1 1296 . + . ID=NZ_JHDH01000046.1:1..1296;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000046.1 RefSeq gene 1 604 . + . ID=gene-AB11_RS00730;Name=AB11_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00730;old_locus_tag=AB11_5019;partial=true;start_range=.,1 NZ_JHDH01000046.1 Protein Homology CDS 1 604 . + 1 ID=cds-WP_032222658.1;Parent=gene-AB11_RS00730;Dbxref=GenBank:WP_032222658.1;Name=WP_032222658.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AB11_RS00730;partial=true;product=MFS transporter;protein_id=WP_032222658.1;start_range=.,1;transl_table=11 NZ_JHDH01000046.1 RefSeq gene 851 1296 . - . ID=gene-AB11_RS00735;Name=AB11_RS00735;end_range=1296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00735;old_locus_tag=AB11_5021;partial=true NZ_JHDH01000046.1 Protein Homology CDS 851 1296 . - 2 ID=cds-WP_032222660.1;Parent=gene-AB11_RS00735;Dbxref=GenBank:WP_032222660.1;Name=WP_032222660.1;end_range=1296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AB11_RS00735;partial=true;product=ROK family protein;protein_id=WP_032222660.1;transl_table=11 ##sequence-region NZ_JHDH01000047.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000047.1 RefSeq region 1 1342 . + . ID=NZ_JHDH01000047.1:1..1342;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000047.1 RefSeq pseudogene 1 1342 . - . ID=gene-AB11_RS00740;Name=AB11_RS00740;end_range=1342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00740;old_locus_tag=AB11_5022;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000047.1 Protein Homology CDS 1 1342 . - 2 ID=cds-AB11_RS00740;Parent=gene-AB11_RS00740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS00740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000048.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000048.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000048.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000048.1 RefSeq gene 1 199 . - . ID=gene-AB11_RS00745;Name=AB11_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00745;old_locus_tag=AB11_5023;partial=true;start_range=.,1 NZ_JHDH01000048.1 Protein Homology CDS 1 199 . - 0 ID=cds-WP_032222669.1;Parent=gene-AB11_RS00745;Dbxref=GenBank:WP_032222669.1;Name=WP_032222669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS00745;partial=true;product=ISAs1 family transposase;protein_id=WP_032222669.1;start_range=.,1;transl_table=11 NZ_JHDH01000048.1 RefSeq pseudogene 302 1428 . - . ID=gene-AB11_RS00750;Name=AB11_RS00750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00750;pseudo=true NZ_JHDH01000048.1 Protein Homology CDS 302 1428 . - 0 ID=cds-AB11_RS00750;Parent=gene-AB11_RS00750;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027427.1;locus_tag=AB11_RS00750;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000048.1 RefSeq gene 1510 1695 . + . ID=gene-AB11_RS00755;Name=AB11_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00755 NZ_JHDH01000048.1 Protein Homology CDS 1510 1695 . + 0 ID=cds-WP_120795385.1-2;Parent=gene-AB11_RS00755;Dbxref=GenBank:WP_120795385.1;Name=WP_120795385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518780.1;locus_tag=AB11_RS00755;product=protein YncO;protein_id=WP_120795385.1;transl_table=11 NZ_JHDH01000048.1 RefSeq gene 1610 2047 . - . ID=gene-AB11_RS25675;Name=AB11_RS25675;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25675;partial=true NZ_JHDH01000048.1 Protein Homology CDS 1610 2047 . - 0 ID=cds-WP_050436700.1;Parent=gene-AB11_RS25675;Dbxref=GenBank:WP_050436700.1;Name=WP_050436700.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415974.1;locus_tag=AB11_RS25675;partial=true;product=YdcD family protein;protein_id=WP_050436700.1;transl_table=11 ##sequence-region NZ_JHDH01000049.1 1 5204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000049.1 RefSeq region 1 5204 . + . ID=NZ_JHDH01000049.1:1..5204;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000049.1 RefSeq pseudogene 1 275 . + . ID=gene-AB11_RS00765;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=AB11_RS00765;old_locus_tag=AB11_5026;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000049.1 Protein Homology CDS 1 275 . + 2 ID=cds-AB11_RS00765;Parent=gene-AB11_RS00765;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB11_RS00765;partial=true;product=glutamate--tRNA ligase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000049.1 RefSeq gene 327 719 . - . ID=gene-AB11_RS00770;Name=AB11_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00770;old_locus_tag=AB11_5027 NZ_JHDH01000049.1 Protein Homology CDS 327 719 . - 0 ID=cds-WP_000826503.1;Parent=gene-AB11_RS00770;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB11_RS00770;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDH01000049.1 RefSeq gene 721 1080 . - . ID=gene-AB11_RS00775;Name=AB11_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00775;old_locus_tag=AB11_5028 NZ_JHDH01000049.1 Protein Homology CDS 721 1080 . - 0 ID=cds-WP_000472021.1;Parent=gene-AB11_RS00775;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB11_RS00775;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDH01000049.1 RefSeq gene 1301 1376 . + . ID=gene-AB11_RS00780;Name=AB11_RS00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00780;old_locus_tag=AB11_5029 NZ_JHDH01000049.1 tRNAscan-SE tRNA 1301 1376 . + . ID=rna-AB11_RS00780;Parent=gene-AB11_RS00780;anticodon=(pos:1334..1336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00780;product=tRNA-Ala NZ_JHDH01000049.1 tRNAscan-SE exon 1301 1376 . + . ID=exon-AB11_RS00780-1;Parent=rna-AB11_RS00780;anticodon=(pos:1334..1336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00780;product=tRNA-Ala NZ_JHDH01000049.1 RefSeq gene 1416 1491 . + . ID=gene-AB11_RS00785;Name=AB11_RS00785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00785;old_locus_tag=AB11_5030 NZ_JHDH01000049.1 tRNAscan-SE tRNA 1416 1491 . + . ID=rna-AB11_RS00785;Parent=gene-AB11_RS00785;anticodon=(pos:1449..1451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00785;product=tRNA-Ala NZ_JHDH01000049.1 tRNAscan-SE exon 1416 1491 . + . ID=exon-AB11_RS00785-1;Parent=rna-AB11_RS00785;anticodon=(pos:1449..1451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00785;product=tRNA-Ala NZ_JHDH01000049.1 RefSeq gene 1700 3889 . + . ID=gene-AB11_RS00790;Name=AB11_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00790;old_locus_tag=AB11_5031 NZ_JHDH01000049.1 Protein Homology CDS 1700 3889 . + 0 ID=cds-WP_000497400.1;Parent=gene-AB11_RS00790;Dbxref=GenBank:WP_000497400.1;Name=WP_000497400.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB11_RS00790;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000497400.1;transl_table=11 NZ_JHDH01000049.1 RefSeq gene 3973 5085 . + . ID=gene-AB11_RS00795;Name=AB11_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00795;old_locus_tag=AB11_5032 NZ_JHDH01000049.1 Protein Homology CDS 3973 5085 . + 0 ID=cds-WP_032222612.1-2;Parent=gene-AB11_RS00795;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS00795;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ##sequence-region NZ_JHDH01000050.1 1 1032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000050.1 RefSeq region 1 1032 . + . ID=NZ_JHDH01000050.1:1..1032;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000051.1 1 2208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000051.1 RefSeq region 1 2208 . + . ID=NZ_JHDH01000051.1:1..2208;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000051.1 RefSeq gene 14 718 . - . ID=gene-AB11_RS00805;Name=AB11_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00805;old_locus_tag=AB11_5034 NZ_JHDH01000051.1 Protein Homology CDS 14 718 . - 0 ID=cds-WP_001067855.1-4;Parent=gene-AB11_RS00805;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB11_RS00805;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JHDH01000051.1 RefSeq gene 765 2027 . - . ID=gene-AB11_RS00810;Name=AB11_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00810;old_locus_tag=AB11_5035 NZ_JHDH01000051.1 Protein Homology CDS 765 2027 . - 0 ID=cds-WP_001598689.1;Parent=gene-AB11_RS00810;Dbxref=GenBank:WP_001598689.1;Name=WP_001598689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AB11_RS00810;product=DNA-binding domain-containing protein;protein_id=WP_001598689.1;transl_table=11 NZ_JHDH01000051.1 RefSeq pseudogene 2102 2208 . - . ID=gene-AB11_RS26190;Name=AB11_RS26190;end_range=2208,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26190;partial=true;pseudo=true NZ_JHDH01000051.1 Protein Homology CDS 2102 2208 . - 2 ID=cds-AB11_RS26190;Parent=gene-AB11_RS26190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AB11_RS26190;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000052.1 1 1388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000052.1 RefSeq region 1 1388 . + . ID=NZ_JHDH01000052.1:1..1388;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000052.1 RefSeq gene 1 845 . - . ID=gene-AB11_RS00820;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB11_RS00820;old_locus_tag=AB11_5037;partial=true;start_range=.,1 NZ_JHDH01000052.1 Protein Homology CDS 1 845 . - 0 ID=cds-WP_032222685.1;Parent=gene-AB11_RS00820;Dbxref=GenBank:WP_032222685.1;Name=WP_032222685.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB11_RS00820;partial=true;product=quinolinate synthase NadA;protein_id=WP_032222685.1;start_range=.,1;transl_table=11 NZ_JHDH01000052.1 RefSeq gene 1123 1198 . - . ID=gene-AB11_RS00825;Name=AB11_RS00825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00825;old_locus_tag=AB11_5038 NZ_JHDH01000052.1 tRNAscan-SE tRNA 1123 1198 . - . ID=rna-AB11_RS00825;Parent=gene-AB11_RS00825;anticodon=(pos:complement(1163..1165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00825;product=tRNA-Lys NZ_JHDH01000052.1 tRNAscan-SE exon 1123 1198 . - . ID=exon-AB11_RS00825-1;Parent=rna-AB11_RS00825;anticodon=(pos:complement(1163..1165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00825;product=tRNA-Lys ##sequence-region NZ_JHDH01000053.1 1 1488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000053.1 RefSeq region 1 1488 . + . ID=NZ_JHDH01000053.1:1..1488;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000053.1 RefSeq gene 1 498 . + . ID=gene-AB11_RS00830;Name=AB11_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00830;old_locus_tag=AB11_5039;partial=true;start_range=.,1 NZ_JHDH01000053.1 Protein Homology CDS 1 498 . + 0 ID=cds-WP_032222690.1;Parent=gene-AB11_RS00830;Dbxref=GenBank:WP_032222690.1;Name=WP_032222690.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AB11_RS00830;partial=true;product=DHHA1 domain-containing protein;protein_id=WP_032222690.1;start_range=.,1;transl_table=11 NZ_JHDH01000053.1 RefSeq gene 733 918 . + . ID=gene-AB11_RS00835;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AB11_RS00835;old_locus_tag=AB11_5041 NZ_JHDH01000053.1 Protein Homology CDS 733 918 . + 0 ID=cds-WP_000906486.1;Parent=gene-AB11_RS00835;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AB11_RS00835;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JHDH01000053.1 RefSeq gene 1234 1326 . + . ID=gene-AB11_RS00840;Name=AB11_RS00840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00840;old_locus_tag=AB11_5042 NZ_JHDH01000053.1 tRNAscan-SE tRNA 1234 1326 . + . ID=rna-AB11_RS00840;Parent=gene-AB11_RS00840;anticodon=(pos:1268..1270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00840;product=tRNA-Ser NZ_JHDH01000053.1 tRNAscan-SE exon 1234 1326 . + . ID=exon-AB11_RS00840-1;Parent=rna-AB11_RS00840;anticodon=(pos:1268..1270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00840;product=tRNA-Ser NZ_JHDH01000053.1 RefSeq gene 1330 1406 . + . ID=gene-AB11_RS00845;Name=AB11_RS00845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00845;old_locus_tag=AB11_5043 NZ_JHDH01000053.1 tRNAscan-SE tRNA 1330 1406 . + . ID=rna-AB11_RS00845;Parent=gene-AB11_RS00845;anticodon=(pos:1364..1366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00845;product=tRNA-Arg NZ_JHDH01000053.1 tRNAscan-SE exon 1330 1406 . + . ID=exon-AB11_RS00845-1;Parent=rna-AB11_RS00845;anticodon=(pos:1364..1366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00845;product=tRNA-Arg ##sequence-region NZ_JHDH01000054.1 1 1838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000054.1 RefSeq region 1 1838 . + . ID=NZ_JHDH01000054.1:1..1838;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000054.1 RefSeq gene 1 935 . + . ID=gene-AB11_RS00850;Name=AB11_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00850;old_locus_tag=AB11_5044;partial=true;start_range=.,1 NZ_JHDH01000054.1 Protein Homology CDS 1 935 . + 2 ID=cds-WP_032222694.1;Parent=gene-AB11_RS00850;Dbxref=GenBank:WP_032222694.1;Name=WP_032222694.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AB11_RS00850;partial=true;product=FGGY-family carbohydrate kinase;protein_id=WP_032222694.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000055.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000055.1 RefSeq region 1 3597 . + . ID=NZ_JHDH01000055.1:1..3597;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000055.1 RefSeq pseudogene 1 193 . - . ID=gene-AB11_RS00855;Name=AB11_RS00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00855;old_locus_tag=AB11_5046;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000055.1 Protein Homology CDS 1 193 . - 0 ID=cds-AB11_RS00855;Parent=gene-AB11_RS00855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AB11_RS00855;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000055.1 RefSeq gene 192 1331 . + . ID=gene-AB11_RS00860;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB11_RS00860;old_locus_tag=AB11_5047 NZ_JHDH01000055.1 Protein Homology CDS 192 1331 . + 0 ID=cds-WP_001294219.1;Parent=gene-AB11_RS00860;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB11_RS00860;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDH01000055.1 RefSeq gene 1314 1367 . - . ID=gene-AB11_RS00865;Name=AB11_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00865 NZ_JHDH01000055.1 Protein Homology CDS 1314 1367 . - 0 ID=cds-WP_010723271.1;Parent=gene-AB11_RS00865;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB11_RS00865;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDH01000055.1 RefSeq gene 1601 1676 . - . ID=gene-AB11_RS00870;Name=AB11_RS00870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS00870;old_locus_tag=AB11_5048 NZ_JHDH01000055.1 tRNAscan-SE tRNA 1601 1676 . - . ID=rna-AB11_RS00870;Parent=gene-AB11_RS00870;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00870;product=tRNA-Gly NZ_JHDH01000055.1 tRNAscan-SE exon 1601 1676 . - . ID=exon-AB11_RS00870-1;Parent=rna-AB11_RS00870;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS00870;product=tRNA-Gly NZ_JHDH01000055.1 RefSeq gene 1887 2432 . - . ID=gene-AB11_RS00875;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB11_RS00875;old_locus_tag=AB11_5049 NZ_JHDH01000055.1 Protein Homology CDS 1887 2432 . - 0 ID=cds-WP_001295188.1;Parent=gene-AB11_RS00875;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB11_RS00875;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDH01000055.1 RefSeq gene 2527 3579 . + . ID=gene-AB11_RS00880;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB11_RS00880;old_locus_tag=AB11_5050 NZ_JHDH01000055.1 Protein Homology CDS 2527 3579 . + 0 ID=cds-WP_000041970.1;Parent=gene-AB11_RS00880;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB11_RS00880;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11 ##sequence-region NZ_JHDH01000056.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000056.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000056.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000056.1 RefSeq gene 1 449 . + . ID=gene-AB11_RS00885;Name=AB11_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00885;old_locus_tag=AB11_5051;partial=true;start_range=.,1 NZ_JHDH01000056.1 Protein Homology CDS 1 449 . + 2 ID=cds-WP_032222702.1;Parent=gene-AB11_RS00885;Dbxref=GenBank:WP_032222702.1;Name=WP_032222702.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AB11_RS00885;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_032222702.1;start_range=.,1;transl_table=11 NZ_JHDH01000056.1 RefSeq gene 543 1232 . + . ID=gene-AB11_RS00890;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AB11_RS00890;old_locus_tag=AB11_5052 NZ_JHDH01000056.1 Protein Homology CDS 543 1232 . + 0 ID=cds-WP_000719886.1;Parent=gene-AB11_RS00890;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AB11_RS00890;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JHDH01000056.1 RefSeq gene 1423 2047 . - . ID=gene-AB11_RS00895;Name=AB11_RS00895;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00895;old_locus_tag=AB11_5053;partial=true NZ_JHDH01000056.1 Protein Homology CDS 1423 2047 . - 1 ID=cds-WP_032222704.1;Parent=gene-AB11_RS00895;Dbxref=GenBank:WP_032222704.1;Name=WP_032222704.1;Ontology_term=GO:0015293,GO:0016020;end_range=2047,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AB11_RS00895;partial=true;product=cation:dicarboxylate symporter family transporter;protein_id=WP_032222704.1;transl_table=11 ##sequence-region NZ_JHDH01000057.1 1 1631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000057.1 RefSeq region 1 1631 . + . ID=NZ_JHDH01000057.1:1..1631;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000057.1 RefSeq gene 1 385 . + . ID=gene-AB11_RS00900;Name=AB11_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00900;partial=true;start_range=.,1 NZ_JHDH01000057.1 Protein Homology CDS 1 385 . + 1 ID=cds-WP_021517114.1;Parent=gene-AB11_RS00900;Dbxref=GenBank:WP_021517114.1;Name=WP_021517114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS00900;partial=true;product=IS3 family transposase;protein_id=WP_021517114.1;start_range=.,1;transl_table=11 NZ_JHDH01000057.1 RefSeq pseudogene 396 1001 . - . ID=gene-AB11_RS00905;Name=AB11_RS00905;end_range=1001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00905;old_locus_tag=AB11_5054;partial=true;pseudo=true;start_range=.,396 NZ_JHDH01000057.1 Protein Homology CDS 396 1001 . - 0 ID=cds-AB11_RS00905;Parent=gene-AB11_RS00905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556547.1;locus_tag=AB11_RS00905;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,396;transl_table=11 NZ_JHDH01000057.1 RefSeq pseudogene 1038 1631 . - . ID=gene-AB11_RS00910;Name=AB11_RS00910;end_range=1631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00910;old_locus_tag=AB11_5055;partial=true;pseudo=true NZ_JHDH01000057.1 Protein Homology CDS 1038 1631 . - 0 ID=cds-AB11_RS00910;Parent=gene-AB11_RS00910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1631,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS00910;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000058.1 1 70397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000058.1 RefSeq region 1 70397 . + . ID=NZ_JHDH01000058.1:1..70397;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000058.1 RefSeq gene 1 357 . + . ID=gene-AB11_RS00915;Name=AB11_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00915;old_locus_tag=AB11_5056;partial=true;start_range=.,1 NZ_JHDH01000058.1 Protein Homology CDS 1 357 . + 0 ID=cds-WP_024202485.1;Parent=gene-AB11_RS00915;Dbxref=GenBank:WP_024202485.1;Name=WP_024202485.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS00915;partial=true;product=integrase core domain-containing protein;protein_id=WP_024202485.1;start_range=.,1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 1443 1715 . + . ID=gene-AB11_RS00920;Name=AB11_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00920 NZ_JHDH01000058.1 Protein Homology CDS 1443 1715 . + 0 ID=cds-WP_001774402.1;Parent=gene-AB11_RS00920;Dbxref=GenBank:WP_001774402.1;Name=WP_001774402.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774402.1;locus_tag=AB11_RS00920;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_001774402.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 2063 2724 . + . ID=gene-AB11_RS00925;Name=AB11_RS00925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00925;partial=true;pseudo=true;start_range=.,2063 NZ_JHDH01000058.1 Protein Homology CDS 2063 2724 . + 0 ID=cds-AB11_RS00925;Parent=gene-AB11_RS00925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907654.1;locus_tag=AB11_RS00925;partial=true;product=transposase;pseudo=true;start_range=.,2063;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 2741 3028 . + . ID=gene-AB11_RS00930;Name=AB11_RS00930;end_range=3028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00930;partial=true;pseudo=true;start_range=.,2741 NZ_JHDH01000058.1 Protein Homology CDS 2741 3028 . + 0 ID=cds-AB11_RS00930;Parent=gene-AB11_RS00930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=3028,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AB11_RS00930;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,2741;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 3309 4478 . - . ID=gene-AB11_RS00935;Name=AB11_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00935;old_locus_tag=AB11_5061 NZ_JHDH01000058.1 Protein Homology CDS 3309 4478 . - 0 ID=cds-WP_032222714.1;Parent=gene-AB11_RS00935;Dbxref=GenBank:WP_032222714.1;Name=WP_032222714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072358.1;locus_tag=AB11_RS00935;product=hypothetical protein;protein_id=WP_032222714.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 4840 5028 . + . ID=gene-AB11_RS00940;Name=AB11_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00940 NZ_JHDH01000058.1 Protein Homology CDS 4840 5028 . + 0 ID=cds-WP_032222715.1;Parent=gene-AB11_RS00940;Dbxref=GenBank:WP_032222715.1;Name=WP_032222715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309252.1;locus_tag=AB11_RS00940;product=hypothetical protein;protein_id=WP_032222715.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 5149 5889 . + . ID=gene-AB11_RS00945;Name=AB11_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00945;old_locus_tag=AB11_5062 NZ_JHDH01000058.1 Protein Homology CDS 5149 5889 . + 0 ID=cds-WP_001066942.1;Parent=gene-AB11_RS00945;Dbxref=GenBank:WP_001066942.1;Name=WP_001066942.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=AB11_RS00945;product=tyrosine-type recombinase/integrase;protein_id=WP_001066942.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 6174 7151 . - . ID=gene-AB11_RS00950;Name=AB11_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00950;old_locus_tag=AB11_5064 NZ_JHDH01000058.1 Protein Homology CDS 6174 7151 . - 0 ID=cds-WP_000361612.1;Parent=gene-AB11_RS00950;Dbxref=GenBank:WP_000361612.1;Name=WP_000361612.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=AB11_RS00950;product=RepB family plasmid replication initiator protein;protein_id=WP_000361612.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 8019 9222 . - . ID=gene-AB11_RS00955;Name=AB11_RS00955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS00955;partial=true;pseudo=true;start_range=.,8019 NZ_JHDH01000058.1 Protein Homology CDS 8019 9222 . - 0 ID=cds-AB11_RS00955;Parent=gene-AB11_RS00955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AB11_RS00955;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,8019;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 9893 13024 . + . ID=gene-AB11_RS00960;Name=AB11_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00960;old_locus_tag=AB11_5066 NZ_JHDH01000058.1 Protein Homology CDS 9893 13024 . + 0 ID=cds-WP_001774327.1;Parent=gene-AB11_RS00960;Dbxref=GenBank:WP_001774327.1;Name=WP_001774327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486777.1;locus_tag=AB11_RS00960;product=hypothetical protein;protein_id=WP_001774327.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 13575 13793 . + . ID=gene-AB11_RS00965;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=AB11_RS00965;old_locus_tag=AB11_5068 NZ_JHDH01000058.1 Protein Homology CDS 13575 13793 . + 0 ID=cds-WP_000813639.1;Parent=gene-AB11_RS00965;Dbxref=GenBank:WP_000813639.1;Name=WP_000813639.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052634.1;locus_tag=AB11_RS00965;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_000813639.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 13795 14100 . + . ID=gene-AB11_RS00970;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=AB11_RS00970;old_locus_tag=AB11_5069 NZ_JHDH01000058.1 Protein Homology CDS 13795 14100 . + 0 ID=cds-WP_001159871.1;Parent=gene-AB11_RS00970;Dbxref=GenBank:WP_001159871.1;Name=WP_001159871.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052635.1;locus_tag=AB11_RS00970;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_001159871.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 14101 14907 . + . ID=gene-AB11_RS00975;Name=AB11_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00975;old_locus_tag=AB11_5070 NZ_JHDH01000058.1 Protein Homology CDS 14101 14907 . + 0 ID=cds-WP_001774328.1;Parent=gene-AB11_RS00975;Dbxref=GenBank:WP_001774328.1;Name=WP_001774328.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052636.1;locus_tag=AB11_RS00975;product=site-specific integrase;protein_id=WP_001774328.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 15661 16416 . + . ID=gene-AB11_RS00980;Name=repE;gbkey=Gene;gene=repE;gene_biotype=protein_coding;locus_tag=AB11_RS00980;old_locus_tag=AB11_5072 NZ_JHDH01000058.1 Protein Homology CDS 15661 16416 . + 0 ID=cds-WP_001774329.1;Parent=gene-AB11_RS00980;Dbxref=GenBank:WP_001774329.1;Name=WP_001774329.1;gbkey=CDS;gene=repE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852146.1;locus_tag=AB11_RS00980;product=replication initiation protein RepE;protein_id=WP_001774329.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 17004 18170 . + . ID=gene-AB11_RS00985;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AB11_RS00985;old_locus_tag=AB11_5074 NZ_JHDH01000058.1 Protein Homology CDS 17004 18170 . + 0 ID=cds-WP_000772446.1;Parent=gene-AB11_RS00985;Dbxref=GenBank:WP_000772446.1;Name=WP_000772446.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AB11_RS00985;product=plasmid-partitioning protein SopA;protein_id=WP_000772446.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 18170 19141 . + . ID=gene-AB11_RS00990;Name=AB11_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00990;old_locus_tag=AB11_5075 NZ_JHDH01000058.1 Protein Homology CDS 18170 19141 . + 0 ID=cds-WP_000817031.1;Parent=gene-AB11_RS00990;Dbxref=GenBank:WP_000817031.1;Name=WP_000817031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052641.1;locus_tag=AB11_RS00990;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_000817031.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 19778 20680 . + . ID=gene-AB11_RS00995;Name=AB11_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS00995;old_locus_tag=AB11_5076 NZ_JHDH01000058.1 Protein Homology CDS 19778 20680 . + 0 ID=cds-WP_077699272.1;Parent=gene-AB11_RS00995;Dbxref=GenBank:WP_077699272.1;Name=WP_077699272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AB11_RS00995;product=DUF1281 domain-containing protein;protein_id=WP_077699272.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 20684 20989 . + . ID=gene-AB11_RS01000;Name=AB11_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01000 NZ_JHDH01000058.1 Protein Homology CDS 20684 20989 . + 0 ID=cds-WP_010891292.1;Parent=gene-AB11_RS01000;Dbxref=GenBank:WP_010891292.1;Name=WP_010891292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052644.1;locus_tag=AB11_RS01000;product=hypothetical protein;protein_id=WP_010891292.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 21066 21749 . + . ID=gene-AB11_RS01005;Name=AB11_RS01005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01005;old_locus_tag=AB11_5079;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 21066 21749 . + 0 ID=cds-AB11_RS01005;Parent=gene-AB11_RS01005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=AB11_RS01005;product=DNA methylase;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 21750 21970 . + . ID=gene-AB11_RS01010;Name=AB11_RS01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01010;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 21750 21970 . + 0 ID=cds-AB11_RS01010;Parent=gene-AB11_RS01010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AB11_RS01010;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 21864 22418 . + . ID=gene-AB11_RS01015;Name=AB11_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01015;old_locus_tag=AB11_5082 NZ_JHDH01000058.1 Protein Homology CDS 21864 22418 . + 0 ID=cds-WP_001358893.1;Parent=gene-AB11_RS01015;Dbxref=GenBank:WP_001358893.1;Name=WP_001358893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AB11_RS01015;product=DUF1380 family protein;protein_id=WP_001358893.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 22464 23240 . + . ID=gene-AB11_RS25145;Name=AB11_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25145;old_locus_tag=AB11_5083 NZ_JHDH01000058.1 Protein Homology CDS 22464 23240 . + 0 ID=cds-WP_001774333.1;Parent=gene-AB11_RS25145;Dbxref=GenBank:WP_001774333.1;Name=WP_001774333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005031.1;locus_tag=AB11_RS25145;product=hypothetical protein;protein_id=WP_001774333.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 23654 24079 . + . ID=gene-AB11_RS01030;Name=AB11_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01030;old_locus_tag=AB11_5084 NZ_JHDH01000058.1 Protein Homology CDS 23654 24079 . + 0 ID=cds-WP_032222724.1;Parent=gene-AB11_RS01030;Dbxref=GenBank:WP_032222724.1;Name=WP_032222724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AB11_RS01030;product=antirestriction protein;protein_id=WP_032222724.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 24126 24548 . + . ID=gene-AB11_RS01035;Name=AB11_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01035;old_locus_tag=AB11_5085 NZ_JHDH01000058.1 Protein Homology CDS 24126 24548 . + 0 ID=cds-WP_032222729.1;Parent=gene-AB11_RS01035;Dbxref=GenBank:WP_032222729.1;Name=WP_032222729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AB11_RS01035;product=DUF1380 family protein;protein_id=WP_032222729.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 24545 24736 . + . ID=gene-AB11_RS01040;Name=AB11_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01040;old_locus_tag=AB11_5086 NZ_JHDH01000058.1 Protein Homology CDS 24545 24736 . + 0 ID=cds-WP_001027514.1;Parent=gene-AB11_RS01040;Dbxref=GenBank:WP_001027514.1;Name=WP_001027514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AB11_RS01040;product=hypothetical protein;protein_id=WP_001027514.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 24866 25324 . + . ID=gene-AB11_RS01045;Name=AB11_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01045 NZ_JHDH01000058.1 GeneMarkS-2+ CDS 24866 25324 . + 0 ID=cds-WP_162751856.1;Parent=gene-AB11_RS01045;Dbxref=GenBank:WP_162751856.1;Name=WP_162751856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS01045;product=hypothetical protein;protein_id=WP_162751856.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 25745 25975 . + . ID=gene-AB11_RS01050;Name=AB11_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01050 NZ_JHDH01000058.1 Protein Homology CDS 25745 25975 . + 0 ID=cds-WP_000218655.1;Parent=gene-AB11_RS01050;Dbxref=GenBank:WP_000218655.1;Name=WP_000218655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AB11_RS01050;product=hypothetical protein;protein_id=WP_000218655.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 26027 27388 . + . ID=gene-AB11_RS01055;Name=AB11_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01055;old_locus_tag=AB11_5090 NZ_JHDH01000058.1 Protein Homology CDS 26027 27388 . + 0 ID=cds-WP_032222731.1;Parent=gene-AB11_RS01055;Dbxref=GenBank:WP_032222731.1;Name=WP_032222731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AB11_RS01055;product=DUF3560 domain-containing protein;protein_id=WP_032222731.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 27436 27999 . + . ID=gene-AB11_RS01060;Name=AB11_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01060;old_locus_tag=AB11_5091 NZ_JHDH01000058.1 Protein Homology CDS 27436 27999 . + 0 ID=cds-WP_032222732.1;Parent=gene-AB11_RS01060;Dbxref=GenBank:WP_032222732.1;Name=WP_032222732.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AB11_RS01060;product=methyltransferase;protein_id=WP_032222732.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 28085 28503 . - . ID=gene-AB11_RS25440;Name=AB11_RS25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25440;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 28085 28503 . - 0 ID=cds-AB11_RS25440;Parent=gene-AB11_RS25440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB11_RS25440;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 28573 28779 . + . ID=gene-AB11_RS25150;Name=AB11_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25150 NZ_JHDH01000058.1 Protein Homology CDS 28573 28779 . + 0 ID=cds-WP_050436701.1;Parent=gene-AB11_RS25150;Dbxref=GenBank:WP_050436701.1;Name=WP_050436701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB11_RS25150;product=hypothetical protein;protein_id=WP_050436701.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 28805 29338 . + . ID=gene-AB11_RS01070;Name=AB11_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01070;old_locus_tag=AB11_5092 NZ_JHDH01000058.1 Protein Homology CDS 28805 29338 . + 0 ID=cds-WP_032222734.1;Parent=gene-AB11_RS01070;Dbxref=GenBank:WP_032222734.1;Name=WP_032222734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AB11_RS01070;product=single-stranded DNA-binding protein;protein_id=WP_032222734.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 29395 29628 . + . ID=gene-AB11_RS01075;Name=AB11_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01075;old_locus_tag=AB11_5093 NZ_JHDH01000058.1 Protein Homology CDS 29395 29628 . + 0 ID=cds-WP_000005990.1;Parent=gene-AB11_RS01075;Dbxref=GenBank:WP_000005990.1;Name=WP_000005990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AB11_RS01075;product=DUF905 family protein;protein_id=WP_000005990.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 29689 31656 . + . ID=gene-AB11_RS01080;Name=AB11_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01080;old_locus_tag=AB11_5094 NZ_JHDH01000058.1 Protein Homology CDS 29689 31656 . + 0 ID=cds-WP_032222736.1;Parent=gene-AB11_RS01080;Dbxref=GenBank:WP_032222736.1;Name=WP_032222736.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AB11_RS01080;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_032222736.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 31725 32159 . + . ID=gene-AB11_RS01085;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AB11_RS01085;old_locus_tag=AB11_5095 NZ_JHDH01000058.1 Protein Homology CDS 31725 32159 . + 0 ID=cds-WP_000845915.1;Parent=gene-AB11_RS01085;Dbxref=GenBank:WP_000845915.1;Name=WP_000845915.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AB11_RS01085;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845915.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 32156 32942 . + . ID=gene-AB11_RS01090;Name=AB11_RS01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01090;old_locus_tag=AB11_5096;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 32156 32942 . + 0 ID=cds-AB11_RS01090;Parent=gene-AB11_RS01090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AB11_RS01090;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 32887 33075 . - . ID=gene-AB11_RS01095;Name=AB11_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01095;old_locus_tag=AB11_5097 NZ_JHDH01000058.1 GeneMarkS-2+ CDS 32887 33075 . - 0 ID=cds-WP_032189914.1;Parent=gene-AB11_RS01095;Dbxref=GenBank:WP_032189914.1;Name=WP_032189914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS01095;product=hypothetical protein;protein_id=WP_032189914.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 33097 33246 . + . ID=gene-AB11_RS25445;Name=mok;end_range=33246,.;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AB11_RS25445;partial=true;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 33097 33246 . + 0 ID=cds-AB11_RS25445;Parent=gene-AB11_RS25445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33246,.;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AB11_RS25445;partial=true;product=plasmid maintenance protein Mok;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 33188 33313 . + . ID=gene-AB11_RS01100;Name=AB11_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01100 NZ_JHDH01000058.1 Protein Homology CDS 33188 33313 . + 0 ID=cds-WP_096937776.1;Parent=gene-AB11_RS01100;Dbxref=GenBank:WP_096937776.1;Name=WP_096937776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AB11_RS01100;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_096937776.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 33548 33881 . - . ID=gene-AB11_RS25450;Name=AB11_RS25450;end_range=33881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25450;partial=true;pseudo=true NZ_JHDH01000058.1 Protein Homology CDS 33548 33881 . - 0 ID=cds-AB11_RS25450;Parent=gene-AB11_RS25450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=33881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310283.1;locus_tag=AB11_RS25450;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 33999 35570 . - . ID=gene-AB11_RS01110;Name=AB11_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01110;old_locus_tag=AB11_5098 NZ_JHDH01000058.1 Protein Homology CDS 33999 35570 . - 0 ID=cds-WP_000381395.1;Parent=gene-AB11_RS01110;Dbxref=GenBank:WP_000381395.1;Name=WP_000381395.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB11_RS01110;product=IS66-like element ISCro1 family transposase;protein_id=WP_000381395.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 35590 35937 . - . ID=gene-AB11_RS01115;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB11_RS01115;old_locus_tag=AB11_5099 NZ_JHDH01000058.1 Protein Homology CDS 35590 35937 . - 0 ID=cds-WP_000624622.1;Parent=gene-AB11_RS01115;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB11_RS01115;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 35937 36614 . - . ID=gene-AB11_RS01120;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB11_RS01120 NZ_JHDH01000058.1 Protein Homology CDS 35937 36614 . - 0 ID=cds-WP_032222744.1;Parent=gene-AB11_RS01120;Dbxref=GenBank:WP_032222744.1;Name=WP_032222744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AB11_RS01120;product=IS66-like element accessory protein TnpA;protein_id=WP_032222744.1;transl_table=11 NZ_JHDH01000058.1 RefSeq pseudogene 36658 37146 . + . ID=gene-AB11_RS01125;Name=AB11_RS01125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01125;old_locus_tag=AB11_5101;partial=true;pseudo=true;start_range=.,36658 NZ_JHDH01000058.1 Protein Homology CDS 36658 37146 . + 0 ID=cds-AB11_RS01125;Parent=gene-AB11_RS01125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AB11_RS01125;partial=true;product=DUF932 domain-containing protein;pseudo=true;start_range=.,36658;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 37449 37955 . - . ID=gene-AB11_RS01130;Name=AB11_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01130;old_locus_tag=AB11_5103 NZ_JHDH01000058.1 Protein Homology CDS 37449 37955 . - 0 ID=cds-WP_032222747.1;Parent=gene-AB11_RS01130;Dbxref=GenBank:WP_032222747.1;Name=WP_032222747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759160.1;locus_tag=AB11_RS01130;product=transglycosylase SLT domain-containing protein;protein_id=WP_032222747.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 38425 38811 . + . ID=gene-AB11_RS01135;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AB11_RS01135 NZ_JHDH01000058.1 Protein Homology CDS 38425 38811 . + 0 ID=cds-WP_032222749.1;Parent=gene-AB11_RS01135;Dbxref=GenBank:WP_032222749.1;Name=WP_032222749.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137413.1;locus_tag=AB11_RS01135;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_032222749.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 39291 39572 . + . ID=gene-AB11_RS01140;Name=AB11_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01140 NZ_JHDH01000058.1 Protein Homology CDS 39291 39572 . + 0 ID=cds-WP_000974581.1;Parent=gene-AB11_RS01140;Dbxref=GenBank:WP_000974581.1;Name=WP_000974581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455362.1;locus_tag=AB11_RS01140;product=hypothetical protein;protein_id=WP_000974581.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 39788 39955 . + . ID=gene-AB11_RS01145;Name=AB11_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01145 NZ_JHDH01000058.1 GeneMarkS-2+ CDS 39788 39955 . + 0 ID=cds-WP_157187929.1;Parent=gene-AB11_RS01145;Dbxref=GenBank:WP_157187929.1;Name=WP_157187929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS01145;product=hypothetical protein;protein_id=WP_157187929.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 40053 40412 . + . ID=gene-AB11_RS01150;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AB11_RS01150;old_locus_tag=AB11_5105 NZ_JHDH01000058.1 Protein Homology CDS 40053 40412 . + 0 ID=cds-WP_001054135.1;Parent=gene-AB11_RS01150;Dbxref=GenBank:WP_001054135.1;Name=WP_001054135.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404412.1;locus_tag=AB11_RS01150;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001054135.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 40414 40719 . + . ID=gene-AB11_RS01155;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AB11_RS01155;old_locus_tag=AB11_5106 NZ_JHDH01000058.1 Protein Homology CDS 40414 40719 . + 0 ID=cds-WP_000016323.1;Parent=gene-AB11_RS01155;Dbxref=GenBank:WP_000016323.1;Name=WP_000016323.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490353.1;locus_tag=AB11_RS01155;product=type IV conjugative transfer system protein TraL;protein_id=WP_000016323.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 40739 41302 . + . ID=gene-AB11_RS01160;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB11_RS01160;old_locus_tag=AB11_5107 NZ_JHDH01000058.1 Protein Homology CDS 40739 41302 . + 0 ID=cds-WP_000406018.1;Parent=gene-AB11_RS01160;Dbxref=GenBank:WP_000406018.1;Name=WP_000406018.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395451.1;locus_tag=AB11_RS01160;product=type IV conjugative transfer system protein TraE;protein_id=WP_000406018.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 41292 42032 . + . ID=gene-AB11_RS01165;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AB11_RS01165;old_locus_tag=AB11_5108 NZ_JHDH01000058.1 Protein Homology CDS 41292 42032 . + 0 ID=cds-WP_032222753.1;Parent=gene-AB11_RS01165;Dbxref=GenBank:WP_032222753.1;Name=WP_032222753.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455355.1;locus_tag=AB11_RS01165;product=type-F conjugative transfer system secretin TraK;protein_id=WP_032222753.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 42019 43383 . + . ID=gene-AB11_RS01170;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AB11_RS01170;old_locus_tag=AB11_5109 NZ_JHDH01000058.1 Protein Homology CDS 42019 43383 . + 0 ID=cds-WP_000024506.1;Parent=gene-AB11_RS01170;Dbxref=GenBank:WP_000024506.1;Name=WP_000024506.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024506.1;locus_tag=AB11_RS01170;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_000024506.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 43495 43719 . + . ID=gene-AB11_RS01175;Name=AB11_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01175 NZ_JHDH01000058.1 Protein Homology CDS 43495 43719 . + 0 ID=cds-WP_000786057.1;Parent=gene-AB11_RS01175;Dbxref=GenBank:WP_000786057.1;Name=WP_000786057.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786061.1;locus_tag=AB11_RS01175;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_000786057.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 43825 44424 . + . ID=gene-AB11_RS01180;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AB11_RS01180;old_locus_tag=AB11_5112 NZ_JHDH01000058.1 Protein Homology CDS 43825 44424 . + 0 ID=cds-WP_001046445.1;Parent=gene-AB11_RS01180;Dbxref=GenBank:WP_001046445.1;Name=WP_001046445.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046447.1;locus_tag=AB11_RS01180;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_001046445.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 44435 47026 . + . ID=gene-AB11_RS01185;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AB11_RS01185;old_locus_tag=AB11_5113 NZ_JHDH01000058.1 Protein Homology CDS 44435 47026 . + 0 ID=cds-WP_000714174.1;Parent=gene-AB11_RS01185;Dbxref=GenBank:WP_000714174.1;Name=WP_000714174.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714154.1;locus_tag=AB11_RS01185;product=type IV secretion system protein TraC;protein_id=WP_000714174.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 47023 47487 . + . ID=gene-AB11_RS01190;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AB11_RS01190;old_locus_tag=AB11_5114 NZ_JHDH01000058.1 Protein Homology CDS 47023 47487 . + 0 ID=cds-WP_000206177.1;Parent=gene-AB11_RS01190;Dbxref=GenBank:WP_000206177.1;Name=WP_000206177.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206176.1;locus_tag=AB11_RS01190;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000206177.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 47487 48122 . + . ID=gene-AB11_RS01195;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AB11_RS01195;old_locus_tag=AB11_5115 NZ_JHDH01000058.1 Protein Homology CDS 47487 48122 . + 0 ID=cds-WP_000286241.1;Parent=gene-AB11_RS01195;Dbxref=GenBank:WP_000286241.1;Name=WP_000286241.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485389.1;locus_tag=AB11_RS01195;product=type-F conjugative transfer system protein TraW;protein_id=WP_000286241.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 48119 49105 . + . ID=gene-AB11_RS01200;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AB11_RS01200;old_locus_tag=AB11_5116 NZ_JHDH01000058.1 Protein Homology CDS 48119 49105 . + 0 ID=cds-WP_001083236.1;Parent=gene-AB11_RS01200;Dbxref=GenBank:WP_001083236.1;Name=WP_001083236.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833231.1;locus_tag=AB11_RS01200;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_001083236.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 49116 49484 . + . ID=gene-AB11_RS01205;Name=AB11_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01205;old_locus_tag=AB11_5117 NZ_JHDH01000058.1 Protein Homology CDS 49116 49484 . + 0 ID=cds-WP_000961329.1;Parent=gene-AB11_RS01205;Dbxref=GenBank:WP_000961329.1;Name=WP_000961329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961329.1;locus_tag=AB11_RS01205;product=hypothetical protein;protein_id=WP_000961329.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 49481 50095 . + . ID=gene-AB11_RS01210;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AB11_RS01210;old_locus_tag=AB11_5118 NZ_JHDH01000058.1 Protein Homology CDS 49481 50095 . + 0 ID=cds-WP_000832605.1;Parent=gene-AB11_RS01210;Dbxref=GenBank:WP_000832605.1;Name=WP_000832605.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485391.1;locus_tag=AB11_RS01210;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_000832605.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 50092 51921 . + . ID=gene-AB11_RS01215;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AB11_RS01215;old_locus_tag=AB11_5119 NZ_JHDH01000058.1 Protein Homology CDS 50092 51921 . + 0 ID=cds-WP_032222757.1;Parent=gene-AB11_RS01215;Dbxref=GenBank:WP_032222757.1;Name=WP_032222757.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821868.1;locus_tag=AB11_RS01215;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_032222757.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 51918 52697 . + . ID=gene-AB11_RS01220;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AB11_RS01220;old_locus_tag=AB11_5120 NZ_JHDH01000058.1 Protein Homology CDS 51918 52697 . + 0 ID=cds-WP_032222760.1;Parent=gene-AB11_RS01220;Dbxref=GenBank:WP_032222760.1;Name=WP_032222760.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403279.1;locus_tag=AB11_RS01220;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_032222760.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 52721 53323 . + . ID=gene-AB11_RS01225;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AB11_RS01225;old_locus_tag=AB11_5121 NZ_JHDH01000058.1 Protein Homology CDS 52721 53323 . + 0 ID=cds-WP_000906493.1;Parent=gene-AB11_RS01225;Dbxref=GenBank:WP_000906493.1;Name=WP_000906493.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486781.1;locus_tag=AB11_RS01225;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000906493.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 53329 54690 . + . ID=gene-AB11_RS01230;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AB11_RS01230;old_locus_tag=AB11_5122 NZ_JHDH01000058.1 Protein Homology CDS 53329 54690 . + 0 ID=cds-WP_032222763.1;Parent=gene-AB11_RS01230;Dbxref=GenBank:WP_032222763.1;Name=WP_032222763.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808382.1;locus_tag=AB11_RS01230;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_032222763.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 54692 57580 . + . ID=gene-AB11_RS01235;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AB11_RS01235;old_locus_tag=AB11_5123 NZ_JHDH01000058.1 Protein Homology CDS 54692 57580 . + 0 ID=cds-WP_032222767.1;Parent=gene-AB11_RS01235;Dbxref=GenBank:WP_032222767.1;Name=WP_032222767.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404420.1;locus_tag=AB11_RS01235;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_032222767.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 57588 58166 . + . ID=gene-AB11_RS25455;Name=AB11_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25455 NZ_JHDH01000058.1 GeneMarkS-2+ CDS 57588 58166 . + 0 ID=cds-WP_248788685.1;Parent=gene-AB11_RS25455;Dbxref=GenBank:WP_248788685.1;Name=WP_248788685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25455;product=protein traS;protein_id=WP_248788685.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 58310 59047 . + . ID=gene-AB11_RS01245;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AB11_RS01245;old_locus_tag=AB11_5125 NZ_JHDH01000058.1 Protein Homology CDS 58310 59047 . + 0 ID=cds-WP_032222788.1;Parent=gene-AB11_RS01245;Dbxref=GenBank:WP_032222788.1;Name=WP_032222788.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485398.1;locus_tag=AB11_RS01245;product=conjugal transfer complement resistance protein TraT;protein_id=WP_032222788.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 59189 61438 . + . ID=gene-AB11_RS01250;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AB11_RS01250;old_locus_tag=AB11_5126 NZ_JHDH01000058.1 Protein Homology CDS 59189 61438 . + 0 ID=cds-WP_032222770.1;Parent=gene-AB11_RS01250;Dbxref=GenBank:WP_032222770.1;Name=WP_032222770.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733785.1;locus_tag=AB11_RS01250;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032222770.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 61438 66732 . + . ID=gene-AB11_RS01255;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AB11_RS01255;old_locus_tag=AB11_5127 NZ_JHDH01000058.1 Protein Homology CDS 61438 66732 . + 0 ID=cds-WP_032222772.1;Parent=gene-AB11_RS01255;Dbxref=GenBank:WP_032222772.1;Name=WP_032222772.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949137.1;locus_tag=AB11_RS01255;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032222772.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 66750 67316 . + . ID=gene-AB11_RS01260;Name=AB11_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01260 NZ_JHDH01000058.1 Protein Homology CDS 66750 67316 . + 0 ID=cds-WP_032222774.1;Parent=gene-AB11_RS01260;Dbxref=GenBank:WP_032222774.1;Name=WP_032222774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000724.1;locus_tag=AB11_RS01260;product=DUF2726 domain-containing protein;protein_id=WP_032222774.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 67313 68044 . + . ID=gene-AB11_RS01265;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AB11_RS01265;old_locus_tag=AB11_5130 NZ_JHDH01000058.1 Protein Homology CDS 67313 68044 . + 0 ID=cds-WP_021558940.1;Parent=gene-AB11_RS01265;Dbxref=GenBank:WP_021558940.1;Name=WP_021558940.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455316.1;locus_tag=AB11_RS01265;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_021558940.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 68234 68518 . + . ID=gene-AB11_RS01270;Name=AB11_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01270 NZ_JHDH01000058.1 Protein Homology CDS 68234 68518 . + 0 ID=cds-WP_071996214.1;Parent=gene-AB11_RS01270;Dbxref=GenBank:WP_071996214.1;Name=WP_071996214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AB11_RS01270;product=hypothetical protein;protein_id=WP_071996214.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 68624 69619 . + . ID=gene-AB11_RS01275;Name=AB11_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01275;old_locus_tag=AB11_5132 NZ_JHDH01000058.1 Protein Homology CDS 68624 69619 . + 0 ID=cds-WP_032222779.1;Parent=gene-AB11_RS01275;Dbxref=GenBank:WP_032222779.1;Name=WP_032222779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118344.1;locus_tag=AB11_RS01275;product=hypothetical protein;protein_id=WP_032222779.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 69696 69893 . + . ID=gene-AB11_RS25950;Name=AB11_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25950 NZ_JHDH01000058.1 Protein Homology CDS 69696 69893 . + 0 ID=cds-WP_001384449.1;Parent=gene-AB11_RS25950;Dbxref=GenBank:WP_001384449.1;Name=WP_001384449.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AB11_RS25950;product=Hok/Gef family protein;protein_id=WP_001384449.1;transl_table=11 NZ_JHDH01000058.1 RefSeq gene 70063 70323 . + . ID=gene-AB11_RS01285;Name=AB11_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01285;old_locus_tag=AB11_5133 NZ_JHDH01000058.1 Protein Homology CDS 70063 70323 . + 0 ID=cds-WP_000083819.1-2;Parent=gene-AB11_RS01285;Dbxref=GenBank:WP_000083819.1;Name=WP_000083819.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858391.1;locus_tag=AB11_RS01285;product=replication regulatory protein RepA;protein_id=WP_000083819.1;transl_table=11 ##sequence-region NZ_JHDH01000059.1 1 2068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000059.1 RefSeq region 1 2068 . + . ID=NZ_JHDH01000059.1:1..2068;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000059.1 RefSeq gene 1 415 . - . ID=gene-AB11_RS01290;Name=AB11_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01290;old_locus_tag=AB11_5134;partial=true;start_range=.,1 NZ_JHDH01000059.1 Protein Homology CDS 1 415 . - 0 ID=cds-WP_032222793.1;Parent=gene-AB11_RS01290;Dbxref=GenBank:WP_032222793.1;Name=WP_032222793.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS01290;partial=true;product=ISAs1 family transposase;protein_id=WP_032222793.1;start_range=.,1;transl_table=11 NZ_JHDH01000059.1 RefSeq pseudogene 546 1682 . - . ID=gene-AB11_RS01295;Name=AB11_RS01295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01295;old_locus_tag=AB11_5135;pseudo=true NZ_JHDH01000059.1 Protein Homology CDS 546 1682 . - 0 ID=cds-AB11_RS01295;Parent=gene-AB11_RS01295;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS01295;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000059.1 RefSeq pseudogene 1826 2062 . - . ID=gene-AB11_RS01300;Name=AB11_RS01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01300;old_locus_tag=AB11_5136;partial=true;pseudo=true;start_range=.,1826 NZ_JHDH01000059.1 Protein Homology CDS 1826 2062 . - 0 ID=cds-AB11_RS01300;Parent=gene-AB11_RS01300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS01300;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1826;transl_table=11 ##sequence-region NZ_JHDH01000060.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000060.1 RefSeq region 1 724 . + . ID=NZ_JHDH01000060.1:1..724;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000061.1 1 2278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000061.1 RefSeq region 1 2278 . + . ID=NZ_JHDH01000061.1:1..2278;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000061.1 RefSeq gene 312 908 . + . ID=gene-AB11_RS01310;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB11_RS01310;old_locus_tag=AB11_5138 NZ_JHDH01000061.1 Protein Homology CDS 312 908 . + 0 ID=cds-WP_000044711.1;Parent=gene-AB11_RS01310;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB11_RS01310;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JHDH01000061.1 RefSeq gene 1389 1937 . + . ID=gene-AB11_RS01315;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB11_RS01315;old_locus_tag=AB11_5139 NZ_JHDH01000061.1 Protein Homology CDS 1389 1937 . + 0 ID=cds-WP_000695546.1;Parent=gene-AB11_RS01315;Dbxref=GenBank:WP_000695546.1;Name=WP_000695546.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AB11_RS01315;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695546.1;transl_table=11 NZ_JHDH01000061.1 RefSeq gene 2002 2278 . + . ID=gene-AB11_RS01320;Name=AB11_RS01320;end_range=2278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01320;old_locus_tag=AB11_5140;partial=true NZ_JHDH01000061.1 Protein Homology CDS 2002 2278 . + 0 ID=cds-WP_032222802.1;Parent=gene-AB11_RS01320;Dbxref=GenBank:WP_032222802.1;Name=WP_032222802.1;Ontology_term=GO:0007155,GO:0009289;end_range=2278,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AB11_RS01320;partial=true;product=fimbrial protein;protein_id=WP_032222802.1;transl_table=11 ##sequence-region NZ_JHDH01000062.1 1 2018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000062.1 RefSeq region 1 2018 . + . ID=NZ_JHDH01000062.1:1..2018;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000062.1 RefSeq gene 10 85 . + . ID=gene-AB11_RS01325;Name=AB11_RS01325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01325;old_locus_tag=AB11_5141 NZ_JHDH01000062.1 tRNAscan-SE tRNA 10 85 . + . ID=rna-AB11_RS01325;Parent=gene-AB11_RS01325;anticodon=(pos:43..45);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01325;product=tRNA-Gly NZ_JHDH01000062.1 tRNAscan-SE exon 10 85 . + . ID=exon-AB11_RS01325-1;Parent=rna-AB11_RS01325;anticodon=(pos:43..45);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01325;product=tRNA-Gly NZ_JHDH01000062.1 RefSeq gene 121 196 . + . ID=gene-AB11_RS01330;Name=AB11_RS01330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01330;old_locus_tag=AB11_5142 NZ_JHDH01000062.1 tRNAscan-SE tRNA 121 196 . + . ID=rna-AB11_RS01330;Parent=gene-AB11_RS01330;anticodon=(pos:154..156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01330;product=tRNA-Gly NZ_JHDH01000062.1 tRNAscan-SE exon 121 196 . + . ID=exon-AB11_RS01330-1;Parent=rna-AB11_RS01330;anticodon=(pos:154..156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01330;product=tRNA-Gly NZ_JHDH01000062.1 RefSeq gene 232 307 . + . ID=gene-AB11_RS01335;Name=AB11_RS01335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01335;old_locus_tag=AB11_5143 NZ_JHDH01000062.1 tRNAscan-SE tRNA 232 307 . + . ID=rna-AB11_RS01335;Parent=gene-AB11_RS01335;anticodon=(pos:265..267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01335;product=tRNA-Gly NZ_JHDH01000062.1 tRNAscan-SE exon 232 307 . + . ID=exon-AB11_RS01335-1;Parent=rna-AB11_RS01335;anticodon=(pos:265..267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01335;product=tRNA-Gly NZ_JHDH01000062.1 RefSeq gene 343 418 . + . ID=gene-AB11_RS01340;Name=AB11_RS01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01340;old_locus_tag=AB11_5144 NZ_JHDH01000062.1 tRNAscan-SE tRNA 343 418 . + . ID=rna-AB11_RS01340;Parent=gene-AB11_RS01340;anticodon=(pos:376..378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01340;product=tRNA-Gly NZ_JHDH01000062.1 tRNAscan-SE exon 343 418 . + . ID=exon-AB11_RS01340-1;Parent=rna-AB11_RS01340;anticodon=(pos:376..378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01340;product=tRNA-Gly NZ_JHDH01000062.1 RefSeq gene 652 705 . + . ID=gene-AB11_RS01345;Name=AB11_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01345 NZ_JHDH01000062.1 Protein Homology CDS 652 705 . + 0 ID=cds-WP_010723271.1-2;Parent=gene-AB11_RS01345;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB11_RS01345;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDH01000062.1 RefSeq gene 688 1827 . - . ID=gene-AB11_RS01350;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB11_RS01350;old_locus_tag=AB11_5145 NZ_JHDH01000062.1 Protein Homology CDS 688 1827 . - 0 ID=cds-WP_001294219.1-2;Parent=gene-AB11_RS01350;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB11_RS01350;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDH01000062.1 RefSeq pseudogene 1826 2018 . + . ID=gene-AB11_RS01355;Name=AB11_RS01355;end_range=2018,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01355;old_locus_tag=AB11_5146;partial=true;pseudo=true NZ_JHDH01000062.1 Protein Homology CDS 1826 2018 . + 0 ID=cds-AB11_RS01355;Parent=gene-AB11_RS01355;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AB11_RS01355;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000063.1 1 485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000063.1 RefSeq region 1 485 . + . ID=NZ_JHDH01000063.1:1..485;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000064.1 1 28925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000064.1 RefSeq region 1 28925 . + . ID=NZ_JHDH01000064.1:1..28925;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000064.1 RefSeq gene 1 368 . + . ID=gene-AB11_RS01360;Name=AB11_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01360;old_locus_tag=AB11_5147;partial=true;start_range=.,1 NZ_JHDH01000064.1 Protein Homology CDS 1 368 . + 2 ID=cds-WP_032222809.1;Parent=gene-AB11_RS01360;Dbxref=GenBank:WP_032222809.1;Name=WP_032222809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS01360;partial=true;product=IS3 family transposase;protein_id=WP_032222809.1;start_range=.,1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 558 4685 . - . ID=gene-AB11_RS01365;Name=AB11_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01365;old_locus_tag=AB11_5148 NZ_JHDH01000064.1 Protein Homology CDS 558 4685 . - 0 ID=cds-WP_032222811.1;Parent=gene-AB11_RS01365;Dbxref=GenBank:WP_032222811.1;Name=WP_032222811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017806.1;locus_tag=AB11_RS01365;product=ATP-binding protein;protein_id=WP_032222811.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 5204 6064 . - . ID=gene-AB11_RS01370;Name=AB11_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01370;old_locus_tag=AB11_5149 NZ_JHDH01000064.1 Protein Homology CDS 5204 6064 . - 0 ID=cds-WP_000873341.1;Parent=gene-AB11_RS01370;Dbxref=GenBank:WP_000873341.1;Name=WP_000873341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873341.1;locus_tag=AB11_RS01370;product=hypothetical protein;protein_id=WP_000873341.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 6061 7665 . - . ID=gene-AB11_RS01375;Name=AB11_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01375;old_locus_tag=AB11_5150 NZ_JHDH01000064.1 Protein Homology CDS 6061 7665 . - 0 ID=cds-WP_032222813.1;Parent=gene-AB11_RS01375;Dbxref=GenBank:WP_032222813.1;Name=WP_032222813.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.6;locus_tag=AB11_RS01375;product=AAA family ATPase;protein_id=WP_032222813.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 8339 8572 . + . ID=gene-AB11_RS25460;Name=AB11_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25460;old_locus_tag=AB11_5151 NZ_JHDH01000064.1 GeneMarkS-2+ CDS 8339 8572 . + 0 ID=cds-WP_015675214.1;Parent=gene-AB11_RS25460;Dbxref=GenBank:WP_015675214.1;Name=WP_015675214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25460;product=hypothetical protein;protein_id=WP_015675214.1;transl_table=11 NZ_JHDH01000064.1 RefSeq pseudogene 8606 8698 . + . ID=gene-AB11_RS01385;Name=AB11_RS01385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01385;partial=true;pseudo=true;start_range=.,8606 NZ_JHDH01000064.1 Protein Homology CDS 8606 8698 . + 0 ID=cds-AB11_RS01385;Parent=gene-AB11_RS01385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843781.1;locus_tag=AB11_RS01385;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,8606;transl_table=11 NZ_JHDH01000064.1 RefSeq pseudogene 9144 9352 . + . ID=gene-AB11_RS01390;Name=AB11_RS01390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01390;partial=true;pseudo=true;start_range=.,9144 NZ_JHDH01000064.1 Protein Homology CDS 9144 9352 . + 0 ID=cds-AB11_RS01390;Parent=gene-AB11_RS01390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AB11_RS01390;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,9144;transl_table=11 NZ_JHDH01000064.1 RefSeq pseudogene 9607 10833 . + . ID=gene-AB11_RS01395;Name=ydeT;gbkey=Gene;gene=ydeT;gene_biotype=pseudogene;locus_tag=AB11_RS01395;old_locus_tag=AB11_5152;partial=true;pseudo=true;start_range=.,9607 NZ_JHDH01000064.1 Protein Homology CDS 9607 10833 . + 0 ID=cds-AB11_RS01395;Parent=gene-AB11_RS01395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ydeT;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AB11_RS01395;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,9607;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 10847 11377 . + . ID=gene-AB11_RS01400;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=AB11_RS01400;old_locus_tag=AB11_5153 NZ_JHDH01000064.1 Protein Homology CDS 10847 11377 . + 0 ID=cds-WP_000876770.1;Parent=gene-AB11_RS01400;Dbxref=GenBank:WP_000876770.1;Name=WP_000876770.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310136.1;locus_tag=AB11_RS01400;product=fimbrial protein;protein_id=WP_000876770.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 11390 11893 . + . ID=gene-AB11_RS01405;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AB11_RS01405;old_locus_tag=AB11_5154 NZ_JHDH01000064.1 Protein Homology CDS 11390 11893 . + 0 ID=cds-WP_001556576.1;Parent=gene-AB11_RS01405;Dbxref=GenBank:WP_001556576.1;Name=WP_001556576.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=AB11_RS01405;product=fimbrial protein;protein_id=WP_001556576.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 11953 12867 . + . ID=gene-AB11_RS01410;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=AB11_RS01410;old_locus_tag=AB11_5155 NZ_JHDH01000064.1 Protein Homology CDS 11953 12867 . + 0 ID=cds-WP_000520659.1;Parent=gene-AB11_RS01410;Dbxref=GenBank:WP_000520659.1;Name=WP_000520659.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310134.1;locus_tag=AB11_RS01410;product=fimbrial protein;protein_id=WP_000520659.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 13201 15480 . + . ID=gene-AB11_RS01415;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AB11_RS01415;old_locus_tag=AB11_5156 NZ_JHDH01000064.1 Protein Homology CDS 13201 15480 . + 0 ID=cds-WP_001556575.1;Parent=gene-AB11_RS01415;Dbxref=GenBank:WP_001556575.1;Name=WP_001556575.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AB11_RS01415;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_001556575.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 15728 15925 . + . ID=gene-AB11_RS01420;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AB11_RS01420;old_locus_tag=AB11_5157 NZ_JHDH01000064.1 Protein Homology CDS 15728 15925 . + 0 ID=cds-WP_000543389.1;Parent=gene-AB11_RS01420;Dbxref=GenBank:WP_000543389.1;Name=WP_000543389.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AB11_RS01420;product=two-component system connector SafA;protein_id=WP_000543389.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 16000 16761 . + . ID=gene-AB11_RS01425;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AB11_RS01425;old_locus_tag=AB11_5158 NZ_JHDH01000064.1 Protein Homology CDS 16000 16761 . + 0 ID=cds-WP_001556574.1;Parent=gene-AB11_RS01425;Dbxref=GenBank:WP_001556574.1;Name=WP_001556574.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707419.1;locus_tag=AB11_RS01425;product=acid stress response transcriptional regulator YdeO;protein_id=WP_001556574.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 17163 18845 . + . ID=gene-AB11_RS01430;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AB11_RS01430;old_locus_tag=AB11_5159 NZ_JHDH01000064.1 Protein Homology CDS 17163 18845 . + 0 ID=cds-WP_001295684.1;Parent=gene-AB11_RS01430;Dbxref=GenBank:WP_001295684.1;Name=WP_001295684.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AB11_RS01430;product=sulfatase-like hydrolase/transferase;protein_id=WP_001295684.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 18897 20054 . + . ID=gene-AB11_RS01435;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AB11_RS01435;old_locus_tag=AB11_5160 NZ_JHDH01000064.1 Protein Homology CDS 18897 20054 . + 0 ID=cds-WP_001299007.1;Parent=gene-AB11_RS01435;Dbxref=GenBank:WP_001299007.1;Name=WP_001299007.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AB11_RS01435;product=anaerobic sulfatase maturase;protein_id=WP_001299007.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 20020 20142 . - . ID=gene-AB11_RS01440;Name=AB11_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01440 NZ_JHDH01000064.1 Protein Homology CDS 20020 20142 . - 0 ID=cds-WP_120795387.1;Parent=gene-AB11_RS01440;Dbxref=GenBank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AB11_RS01440;product=protein YneP;protein_id=WP_120795387.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 20345 22030 . + . ID=gene-AB11_RS01445;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AB11_RS01445;old_locus_tag=AB11_5161 NZ_JHDH01000064.1 Protein Homology CDS 20345 22030 . + 0 ID=cds-WP_032222816.1;Parent=gene-AB11_RS01445;Dbxref=GenBank:WP_032222816.1;Name=WP_032222816.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AB11_RS01445;product=ABC transporter ATP-binding protein/permease;protein_id=WP_032222816.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 22068 24440 . + . ID=gene-AB11_RS01450;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AB11_RS01450;old_locus_tag=AB11_5162 NZ_JHDH01000064.1 Protein Homology CDS 22068 24440 . + 0 ID=cds-WP_001737152.1;Parent=gene-AB11_RS01450;Dbxref=GenBank:WP_001737152.1;Name=WP_001737152.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AB11_RS01450;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_001737152.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 24497 27280 . + . ID=gene-AB11_RS01455;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AB11_RS01455;old_locus_tag=AB11_5163 NZ_JHDH01000064.1 Protein Homology CDS 24497 27280 . + 0 ID=cds-WP_001244979.1;Parent=gene-AB11_RS01455;Dbxref=GenBank:WP_001244979.1;Name=WP_001244979.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AB11_RS01455;product=M16 family metallopeptidase;protein_id=WP_001244979.1;transl_table=11 NZ_JHDH01000064.1 RefSeq gene 27642 28925 . + . ID=gene-AB11_RS01460;Name=AB11_RS01460;end_range=28925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01460;old_locus_tag=AB11_5164;partial=true NZ_JHDH01000064.1 Protein Homology CDS 27642 28925 . + 0 ID=cds-WP_032222819.1;Parent=gene-AB11_RS01460;Dbxref=GenBank:WP_032222819.1;Name=WP_032222819.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=28925,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB11_RS01460;partial=true;product=glutamate decarboxylase;protein_id=WP_032222819.1;transl_table=11 ##sequence-region NZ_JHDH01000065.1 1 1696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000065.1 RefSeq region 1 1696 . + . ID=NZ_JHDH01000065.1:1..1696;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000065.1 RefSeq gene 1 166 . - . ID=gene-AB11_RS01465;Name=AB11_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01465;old_locus_tag=AB11_5165;partial=true;start_range=.,1 NZ_JHDH01000065.1 Protein Homology CDS 1 166 . - 0 ID=cds-WP_077762039.1;Parent=gene-AB11_RS01465;Dbxref=GenBank:WP_077762039.1;Name=WP_077762039.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236337.1;locus_tag=AB11_RS01465;partial=true;product=LysR family transcriptional regulator;protein_id=WP_077762039.1;start_range=.,1;transl_table=11 NZ_JHDH01000065.1 RefSeq gene 279 1490 . + . ID=gene-AB11_RS01470;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AB11_RS01470;old_locus_tag=AB11_5166 NZ_JHDH01000065.1 Protein Homology CDS 279 1490 . + 0 ID=cds-WP_001182363.1;Parent=gene-AB11_RS01470;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AB11_RS01470;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 ##sequence-region NZ_JHDH01000066.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000066.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000066.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000066.1 RefSeq gene 1 808 . + . ID=gene-AB11_RS01475;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AB11_RS01475;old_locus_tag=AB11_5167;partial=true;start_range=.,1 NZ_JHDH01000066.1 Protein Homology CDS 1 808 . + 1 ID=cds-WP_032222824.1;Parent=gene-AB11_RS01475;Dbxref=GenBank:WP_032222824.1;Name=WP_032222824.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AB11_RS01475;partial=true;product=alcohol dehydrogenase AdhP;protein_id=WP_032222824.1;start_range=.,1;transl_table=11 NZ_JHDH01000066.1 RefSeq gene 954 1238 . + . ID=gene-AB11_RS01480;Name=AB11_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01480;old_locus_tag=AB11_5168 NZ_JHDH01000066.1 Protein Homology CDS 954 1238 . + 0 ID=cds-WP_000781370.1;Parent=gene-AB11_RS01480;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AB11_RS01480;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JHDH01000066.1 RefSeq gene 1467 2047 . - . ID=gene-AB11_RS01485;Name=fdnI;end_range=2047,.;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AB11_RS01485;old_locus_tag=AB11_5169;partial=true NZ_JHDH01000066.1 Protein Homology CDS 1467 2047 . - 2 ID=cds-WP_032222826.1;Parent=gene-AB11_RS01485;Dbxref=GenBank:WP_032222826.1;Name=WP_032222826.1;end_range=2047,.;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AB11_RS01485;partial=true;product=formate dehydrogenase-N subunit gamma;protein_id=WP_032222826.1;transl_table=11 ##sequence-region NZ_JHDH01000067.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000067.1 RefSeq region 1 440 . + . ID=NZ_JHDH01000067.1:1..440;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000067.1 RefSeq gene 1 440 . + . ID=gene-AB11_RS01490;Name=AB11_RS01490;end_range=440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01490;old_locus_tag=AB11_5170;partial=true;start_range=.,1 NZ_JHDH01000067.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_032222829.1;Parent=gene-AB11_RS01490;Dbxref=GenBank:WP_032222829.1;Name=WP_032222829.1;Ontology_term=GO:0016020;end_range=440,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AB11_RS01490;partial=true;product=EamA family transporter;protein_id=WP_032222829.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000068.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000068.1 RefSeq region 1 309 . + . ID=NZ_JHDH01000068.1:1..309;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000069.1 1 9331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000069.1 RefSeq region 1 9331 . + . ID=NZ_JHDH01000069.1:1..9331;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000069.1 RefSeq gene 1 225 . - . ID=gene-AB11_RS01500;Name=AB11_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01500;old_locus_tag=AB11_5171;partial=true;start_range=.,1 NZ_JHDH01000069.1 Protein Homology CDS 1 225 . - 0 ID=cds-WP_204362280.1;Parent=gene-AB11_RS01500;Dbxref=GenBank:WP_204362280.1;Name=WP_204362280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135553.1;locus_tag=AB11_RS01500;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_204362280.1;start_range=.,1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 300 968 . - . ID=gene-AB11_RS01505;Name=AB11_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01505;old_locus_tag=AB11_5172 NZ_JHDH01000069.1 Protein Homology CDS 300 968 . - 0 ID=cds-WP_001300294.1;Parent=gene-AB11_RS01505;Dbxref=GenBank:WP_001300294.1;Name=WP_001300294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AB11_RS01505;product=EAL domain-containing protein;protein_id=WP_001300294.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 1004 1240 . - . ID=gene-AB11_RS01510;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=AB11_RS01510;old_locus_tag=AB11_5173 NZ_JHDH01000069.1 Protein Homology CDS 1004 1240 . - 0 ID=cds-WP_000993386.1;Parent=gene-AB11_RS01510;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102820.1;locus_tag=AB11_RS01510;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 1237 1599 . - . ID=gene-AB11_RS01515;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=AB11_RS01515;old_locus_tag=AB11_5174 NZ_JHDH01000069.1 Protein Homology CDS 1237 1599 . - 0 ID=cds-WP_001277456.1;Parent=gene-AB11_RS01515;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=AB11_RS01515;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 1617 3311 . - . ID=gene-AB11_RS01520;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=AB11_RS01520;old_locus_tag=AB11_5175 NZ_JHDH01000069.1 Protein Homology CDS 1617 3311 . - 0 ID=cds-WP_000105636.1;Parent=gene-AB11_RS01520;Dbxref=GenBank:WP_000105636.1;Name=WP_000105636.1;Ontology_term=GO:0046689,GO:0050787,GO:0016152,GO:0045340,GO:0050660,GO:0050661;gbkey=CDS;gene=merA;go_function=mercury (II) reductase (NADP+) activity|0016152||IEA,mercury ion binding|0045340||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=response to mercury ion|0046689||IEA,detoxification of mercury ion|0050787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=AB11_RS01520;product=mercury(II) reductase;protein_id=WP_000105636.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 3363 3785 . - . ID=gene-AB11_RS01525;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=AB11_RS01525;old_locus_tag=AB11_5176 NZ_JHDH01000069.1 Protein Homology CDS 3363 3785 . - 0 ID=cds-WP_001340589.1;Parent=gene-AB11_RS01525;Dbxref=GenBank:WP_001340589.1;Name=WP_001340589.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239395.1;locus_tag=AB11_RS01525;product=organomercurial transporter MerC;protein_id=WP_001340589.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 3821 4096 . - . ID=gene-AB11_RS01530;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=AB11_RS01530;old_locus_tag=AB11_5177 NZ_JHDH01000069.1 Protein Homology CDS 3821 4096 . - 0 ID=cds-WP_000732292.1;Parent=gene-AB11_RS01530;Dbxref=GenBank:WP_000732292.1;Name=WP_000732292.1;Ontology_term=GO:0046689,GO:0045340,GO:0042597;gbkey=CDS;gene=merP;go_component=periplasmic space|0042597||IEA;go_function=mercury ion binding|0045340||IEA;go_process=response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636750.1;locus_tag=AB11_RS01530;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_000732292.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 4110 4460 . - . ID=gene-AB11_RS01535;Name=AB11_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01535;old_locus_tag=AB11_5178 NZ_JHDH01000069.1 Protein Homology CDS 4110 4460 . - 0 ID=cds-WP_001294663.1;Parent=gene-AB11_RS01535;Dbxref=GenBank:WP_001294663.1;Name=WP_001294663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011111453.1;locus_tag=AB11_RS01535;product=mercuric transport protein MerT;protein_id=WP_001294663.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 4532 4966 . + . ID=gene-AB11_RS01540;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=AB11_RS01540;old_locus_tag=AB11_5179 NZ_JHDH01000069.1 Protein Homology CDS 4532 4966 . + 0 ID=cds-WP_000429836.1;Parent=gene-AB11_RS01540;Dbxref=GenBank:WP_000429836.1;Name=WP_000429836.1;Ontology_term=GO:0006355,GO:0046689,GO:0003677,GO:0045340;gbkey=CDS;gene=merR;go_function=DNA binding|0003677||IEA,mercury ion binding|0045340||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1;locus_tag=AB11_RS01540;product=Hg(II)-responsive transcriptional regulator;protein_id=WP_000429836.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 6243 6893 . - . ID=gene-AB11_RS01550;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=AB11_RS01550;old_locus_tag=AB11_5180 NZ_JHDH01000069.1 Protein Homology CDS 6243 6893 . - 0 ID=cds-WP_000164043.1;Parent=gene-AB11_RS01550;Dbxref=GenBank:WP_000164043.1;Name=WP_000164043.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=AB11_RS01550;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_000164043.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 6999 8198 . + . ID=gene-AB11_RS01555;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=AB11_RS01555;old_locus_tag=AB11_5181 NZ_JHDH01000069.1 Protein Homology CDS 6999 8198 . + 0 ID=cds-WP_000804064.1;Parent=gene-AB11_RS01555;Dbxref=GenBank:WP_000804064.1;Name=WP_000804064.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=AB11_RS01555;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_000804064.1;transl_table=11 NZ_JHDH01000069.1 RefSeq gene 8230 9141 . - . ID=gene-AB11_RS01560;Name=AB11_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01560;old_locus_tag=AB11_5182 NZ_JHDH01000069.1 Protein Homology CDS 8230 9141 . - 0 ID=cds-WP_065897011.1;Parent=gene-AB11_RS01560;Dbxref=GenBank:WP_065897011.1;Name=WP_065897011.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=AB11_RS01560;product=DMT family transporter;protein_id=WP_065897011.1;transl_table=11 NZ_JHDH01000069.1 RefSeq pseudogene 9075 9331 . - . ID=gene-AB11_RS01565;Name=AB11_RS01565;end_range=9331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01565;old_locus_tag=AB11_5183;partial=true;pseudo=true NZ_JHDH01000069.1 GeneMarkS-2+ CDS 9075 9331 . - 2 ID=cds-AB11_RS01565;Parent=gene-AB11_RS01565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9331,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS01565;partial=true;product=Mu transposase C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000070.1 1 1503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000070.1 RefSeq region 1 1503 . + . ID=NZ_JHDH01000070.1:1..1503;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000070.1 RefSeq gene 1 337 . + . ID=gene-AB11_RS01570;Name=AB11_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01570;partial=true;start_range=.,1 NZ_JHDH01000070.1 Protein Homology CDS 1 337 . + 1 ID=cds-WP_000313625.1;Parent=gene-AB11_RS01570;Dbxref=GenBank:WP_000313625.1;Name=WP_000313625.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS01570;partial=true;product=integrase core domain-containing protein;protein_id=WP_000313625.1;start_range=.,1;transl_table=11 NZ_JHDH01000070.1 RefSeq pseudogene 349 1472 . - . ID=gene-AB11_RS01575;Name=AB11_RS01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01575;partial=true;pseudo=true;start_range=.,349 NZ_JHDH01000070.1 Protein Homology CDS 349 1472 . - 0 ID=cds-AB11_RS01575;Parent=gene-AB11_RS01575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS01575;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;start_range=.,349;transl_table=11 ##sequence-region NZ_JHDH01000071.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000071.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000071.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000071.1 RefSeq gene 1 2047 . + . ID=gene-AB11_RS01580;Name=AB11_RS01580;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01580;old_locus_tag=AB11_5186;partial=true;start_range=.,1 NZ_JHDH01000071.1 Protein Homology CDS 1 2047 . + 0 ID=cds-WP_250855023.1;Parent=gene-AB11_RS01580;Dbxref=GenBank:WP_250855023.1;Name=WP_250855023.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AB11_RS01580;partial=true;product=DNA translocase FtsK;protein_id=WP_250855023.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000072.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000072.1 RefSeq region 1 617 . + . ID=NZ_JHDH01000072.1:1..617;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000072.1 RefSeq gene 1 565 . - . ID=gene-AB11_RS01585;Name=AB11_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01585;old_locus_tag=AB11_5187;partial=true;start_range=.,1 NZ_JHDH01000072.1 Protein Homology CDS 1 565 . - 0 ID=cds-WP_445080662.1;Parent=gene-AB11_RS01585;Dbxref=GenBank:WP_445080662.1;Name=WP_445080662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.6;locus_tag=AB11_RS01585;partial=true;product=helicase RepA family protein;protein_id=WP_445080662.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000073.1 1 496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000073.1 RefSeq region 1 496 . + . ID=NZ_JHDH01000073.1:1..496;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000073.1 RefSeq gene 23 98 . - . ID=gene-AB11_RS01590;Name=AB11_RS01590;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01590;old_locus_tag=AB11_5188 NZ_JHDH01000073.1 tRNAscan-SE tRNA 23 98 . - . ID=rna-AB11_RS01590;Parent=gene-AB11_RS01590;anticodon=(pos:complement(63..65));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01590;product=tRNA-Lys NZ_JHDH01000073.1 tRNAscan-SE exon 23 98 . - . ID=exon-AB11_RS01590-1;Parent=rna-AB11_RS01590;anticodon=(pos:complement(63..65));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01590;product=tRNA-Lys NZ_JHDH01000073.1 RefSeq gene 231 306 . - . ID=gene-AB11_RS01595;Name=AB11_RS01595;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01595;old_locus_tag=AB11_5189 NZ_JHDH01000073.1 tRNAscan-SE tRNA 231 306 . - . ID=rna-AB11_RS01595;Parent=gene-AB11_RS01595;anticodon=(pos:complement(271..273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01595;product=tRNA-Lys NZ_JHDH01000073.1 tRNAscan-SE exon 231 306 . - . ID=exon-AB11_RS01595-1;Parent=rna-AB11_RS01595;anticodon=(pos:complement(271..273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01595;product=tRNA-Lys ##sequence-region NZ_JHDH01000074.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000074.1 RefSeq region 1 979 . + . ID=NZ_JHDH01000074.1:1..979;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000074.1 RefSeq gene 1 249 . + . ID=gene-AB11_RS25160;Name=AB11_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25160;partial=true;start_range=.,1 NZ_JHDH01000074.1 GeneMarkS-2+ CDS 1 249 . + 0 ID=cds-WP_050436702.1;Parent=gene-AB11_RS25160;Dbxref=GenBank:WP_050436702.1;Name=WP_050436702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25160;partial=true;product=hypothetical protein;protein_id=WP_050436702.1;start_range=.,1;transl_table=11 NZ_JHDH01000074.1 RefSeq gene 264 371 . - . ID=gene-AB11_RS01600;Name=AB11_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01600;old_locus_tag=AB11_5190 NZ_JHDH01000074.1 Protein Homology CDS 264 371 . - 0 ID=cds-WP_000170963.1;Parent=gene-AB11_RS01600;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AB11_RS01600;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 NZ_JHDH01000074.1 RefSeq gene 799 906 . - . ID=gene-AB11_RS01605;Name=AB11_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01605 NZ_JHDH01000074.1 Protein Homology CDS 799 906 . - 0 ID=cds-WP_000170955.1;Parent=gene-AB11_RS01605;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AB11_RS01605;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 ##sequence-region NZ_JHDH01000075.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000075.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000075.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000075.1 RefSeq gene 1 1189 . + . ID=gene-AB11_RS01610;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AB11_RS01610;old_locus_tag=AB11_5192;partial=true;start_range=.,1 NZ_JHDH01000075.1 Protein Homology CDS 1 1189 . + 1 ID=cds-WP_032222863.1;Parent=gene-AB11_RS01610;Dbxref=GenBank:WP_032222863.1;Name=WP_032222863.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AB11_RS01610;partial=true;product=cytosine/isoguanine deaminase;protein_id=WP_032222863.1;start_range=.,1;transl_table=11 NZ_JHDH01000075.1 RefSeq gene 1326 2047 . - . ID=gene-AB11_RS01615;Name=cynR;end_range=2047,.;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AB11_RS01615;old_locus_tag=AB11_5193;partial=true NZ_JHDH01000075.1 Protein Homology CDS 1326 2047 . - 2 ID=cds-WP_032222864.1;Parent=gene-AB11_RS01615;Dbxref=GenBank:WP_032222864.1;Name=WP_032222864.1;Ontology_term=GO:0006355,GO:0003700;end_range=2047,.;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AB11_RS01615;partial=true;product=transcriptional regulator CynR;protein_id=WP_032222864.1;transl_table=11 ##sequence-region NZ_JHDH01000076.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000076.1 RefSeq region 1 651 . + . ID=NZ_JHDH01000076.1:1..651;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 ##sequence-region NZ_JHDH01000077.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000077.1 RefSeq region 1 723 . + . ID=NZ_JHDH01000077.1:1..723;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000077.1 RefSeq gene 1 373 . + . ID=gene-AB11_RS01625;Name=AB11_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01625;old_locus_tag=AB11_5194;partial=true;start_range=.,1 NZ_JHDH01000077.1 Protein Homology CDS 1 373 . + 1 ID=cds-WP_032222869.1;Parent=gene-AB11_RS01625;Dbxref=GenBank:WP_032222869.1;Name=WP_032222869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AB11_RS01625;partial=true;product=formyltetrahydrofolate deformylase;protein_id=WP_032222869.1;start_range=.,1;transl_table=11 NZ_JHDH01000077.1 RefSeq gene 533 617 . + . ID=gene-AB11_RS01630;Name=AB11_RS01630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01630;old_locus_tag=AB11_5195 NZ_JHDH01000077.1 tRNAscan-SE tRNA 533 617 . + . ID=rna-AB11_RS01630;Parent=gene-AB11_RS01630;anticodon=(pos:567..569);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01630;product=tRNA-Tyr NZ_JHDH01000077.1 tRNAscan-SE exon 533 617 . + . ID=exon-AB11_RS01630-1;Parent=rna-AB11_RS01630;anticodon=(pos:567..569);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01630;product=tRNA-Tyr NZ_JHDH01000077.1 RefSeq pseudogene 599 723 . - . ID=gene-AB11_RS25680;Name=AB11_RS25680;end_range=723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25680;partial=true;pseudo=true;start_range=.,599 NZ_JHDH01000077.1 Protein Homology CDS 599 723 . - 2 ID=cds-AB11_RS25680;Parent=gene-AB11_RS25680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518769.1;locus_tag=AB11_RS25680;partial=true;product=hypothetical protein;pseudo=true;start_range=.,599;transl_table=11 ##sequence-region NZ_JHDH01000078.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000078.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000078.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000078.1 RefSeq gene 1 1053 . + . ID=gene-AB11_RS01635;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AB11_RS01635;old_locus_tag=AB11_5196;partial=true;start_range=.,1 NZ_JHDH01000078.1 Protein Homology CDS 1 1053 . + 0 ID=cds-WP_032213636.1;Parent=gene-AB11_RS01635;Dbxref=GenBank:WP_032213636.1;Name=WP_032213636.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB11_RS01635;partial=true;product=isocitrate lyase;protein_id=WP_032213636.1;start_range=.,1;transl_table=11 NZ_JHDH01000078.1 RefSeq gene 1236 2047 . + . ID=gene-AB11_RS01640;Name=AB11_RS01640;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01640;old_locus_tag=AB11_5197;partial=true NZ_JHDH01000078.1 Protein Homology CDS 1236 2047 . + 0 ID=cds-WP_032222873.1;Parent=gene-AB11_RS01640;Dbxref=GenBank:WP_032222873.1;Name=WP_032222873.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB11_RS01640;partial=true;product=isocitrate dehydrogenase kinase/phosphatase AceK regulatory subunit;protein_id=WP_032222873.1;transl_table=11 ##sequence-region NZ_JHDH01000079.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000079.1 RefSeq region 1 546 . + . ID=NZ_JHDH01000079.1:1..546;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000079.1 RefSeq gene 58 144 . - . ID=gene-AB11_RS01645;Name=AB11_RS01645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01645;old_locus_tag=AB11_5198 NZ_JHDH01000079.1 tRNAscan-SE tRNA 58 144 . - . ID=rna-AB11_RS01645;Parent=gene-AB11_RS01645;anticodon=(pos:complement(108..110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01645;product=tRNA-Leu NZ_JHDH01000079.1 tRNAscan-SE exon 58 144 . - . ID=exon-AB11_RS01645-1;Parent=rna-AB11_RS01645;anticodon=(pos:complement(108..110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01645;product=tRNA-Leu NZ_JHDH01000079.1 RefSeq gene 157 230 . - . ID=gene-AB11_RS01650;Name=AB11_RS01650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01650;old_locus_tag=AB11_5199 NZ_JHDH01000079.1 tRNAscan-SE tRNA 157 230 . - . ID=rna-AB11_RS01650;Parent=gene-AB11_RS01650;anticodon=(pos:complement(196..198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01650;product=tRNA-Cys NZ_JHDH01000079.1 tRNAscan-SE exon 157 230 . - . ID=exon-AB11_RS01650-1;Parent=rna-AB11_RS01650;anticodon=(pos:complement(196..198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01650;product=tRNA-Cys NZ_JHDH01000079.1 RefSeq gene 285 360 . - . ID=gene-AB11_RS01655;Name=AB11_RS01655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01655;old_locus_tag=AB11_5200 NZ_JHDH01000079.1 tRNAscan-SE tRNA 285 360 . - . ID=rna-AB11_RS01655;Parent=gene-AB11_RS01655;anticodon=(pos:complement(325..327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01655;product=tRNA-Gly NZ_JHDH01000079.1 tRNAscan-SE exon 285 360 . - . ID=exon-AB11_RS01655-1;Parent=rna-AB11_RS01655;anticodon=(pos:complement(325..327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01655;product=tRNA-Gly NZ_JHDH01000079.1 RefSeq gene 396 471 . - . ID=gene-AB11_RS01660;Name=AB11_RS01660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS01660;old_locus_tag=AB11_5201 NZ_JHDH01000079.1 tRNAscan-SE tRNA 396 471 . - . ID=rna-AB11_RS01660;Parent=gene-AB11_RS01660;anticodon=(pos:complement(436..438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01660;product=tRNA-Gly NZ_JHDH01000079.1 tRNAscan-SE exon 396 471 . - . ID=exon-AB11_RS01660-1;Parent=rna-AB11_RS01660;anticodon=(pos:complement(436..438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS01660;product=tRNA-Gly ##sequence-region NZ_JHDH01000080.1 1 1039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000080.1 RefSeq region 1 1039 . + . ID=NZ_JHDH01000080.1:1..1039;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000080.1 RefSeq pseudogene 1 277 . + . ID=gene-AB11_RS01665;Name=AB11_RS01665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01665;old_locus_tag=AB11_5202;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000080.1 Protein Homology CDS 1 277 . + 1 ID=cds-AB11_RS01665;Parent=gene-AB11_RS01665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AB11_RS01665;partial=true;product=DUF1116 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000080.1 RefSeq gene 513 1039 . + . ID=gene-AB11_RS01670;Name=AB11_RS01670;end_range=1039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01670;old_locus_tag=AB11_5204;partial=true NZ_JHDH01000080.1 Protein Homology CDS 513 1039 . + 0 ID=cds-WP_032222878.1;Parent=gene-AB11_RS01670;Dbxref=GenBank:WP_032222878.1;Name=WP_032222878.1;end_range=1039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AB11_RS01670;partial=true;product=carbamate kinase;protein_id=WP_032222878.1;transl_table=11 ##sequence-region NZ_JHDH01000081.1 1 138985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000081.1 RefSeq region 1 138985 . + . ID=NZ_JHDH01000081.1:1..138985;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000081.1 RefSeq gene 47 1159 . + . ID=gene-AB11_RS01675;Name=AB11_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01675;old_locus_tag=AB11_0001 NZ_JHDH01000081.1 Protein Homology CDS 47 1159 . + 0 ID=cds-WP_032222612.1-3;Parent=gene-AB11_RS01675;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS01675;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 1353 1505 . - . ID=gene-AB11_RS01680;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AB11_RS01680 NZ_JHDH01000081.1 Protein Homology CDS 1353 1505 . - 0 ID=cds-WP_000809168.1;Parent=gene-AB11_RS01680;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AB11_RS01680;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 2091 3257 . + . ID=gene-AB11_RS01685;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AB11_RS01685;old_locus_tag=AB11_0002 NZ_JHDH01000081.1 Protein Homology CDS 2091 3257 . + 0 ID=cds-WP_000681368.1;Parent=gene-AB11_RS01685;Dbxref=GenBank:WP_000681368.1;Name=WP_000681368.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AB11_RS01685;product=Na+/H+ antiporter NhaA;protein_id=WP_000681368.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 3323 4222 . + . ID=gene-AB11_RS01690;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AB11_RS01690;old_locus_tag=AB11_0003 NZ_JHDH01000081.1 Protein Homology CDS 3323 4222 . + 0 ID=cds-WP_001300855.1;Parent=gene-AB11_RS01690;Dbxref=GenBank:WP_001300855.1;Name=WP_001300855.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AB11_RS01690;product=transcriptional activator NhaR;protein_id=WP_001300855.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 4260 5219 . - . ID=gene-AB11_RS01695;Name=AB11_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01695;old_locus_tag=AB11_0004 NZ_JHDH01000081.1 Protein Homology CDS 4260 5219 . - 0 ID=cds-WP_000871671.1;Parent=gene-AB11_RS01695;Dbxref=GenBank:WP_000871671.1;Name=WP_000871671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AB11_RS01695;product=hypothetical protein;protein_id=WP_000871671.1;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 5232 6563 . - . ID=gene-AB11_RS01700;Name=AB11_RS01700;end_range=6563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01700;old_locus_tag=AB11_0005;partial=true;pseudo=true NZ_JHDH01000081.1 Protein Homology CDS 5232 6563 . - 0 ID=cds-AB11_RS01700;Parent=gene-AB11_RS01700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=6563,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AB11_RS01700;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 6810 8230 . - . ID=gene-AB11_RS01705;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=pseudogene;locus_tag=AB11_RS01705;old_locus_tag=AB11_0006;pseudo=true NZ_JHDH01000081.1 Protein Homology CDS 6810 8230 . - 0 ID=cds-AB11_RS01705;Parent=gene-AB11_RS01705;Note=frameshifted;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AB11_RS01705;product=type III secretion system effector EspX1;pseudo=true;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 8713 8976 . - . ID=gene-AB11_RS01710;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AB11_RS01710;old_locus_tag=AB11_0007 NZ_JHDH01000081.1 Protein Homology CDS 8713 8976 . - 0 ID=cds-WP_001274021.1;Parent=gene-AB11_RS01710;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AB11_RS01710;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 9079 9297 . + . ID=gene-AB11_RS01715;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AB11_RS01715 NZ_JHDH01000081.1 Protein Homology CDS 9079 9297 . + 0 ID=cds-WP_001300728.1;Parent=gene-AB11_RS01715;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AB11_RS01715;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 9305 10246 . + . ID=gene-AB11_RS01720;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AB11_RS01720;old_locus_tag=AB11_0008 NZ_JHDH01000081.1 Protein Homology CDS 9305 10246 . + 0 ID=cds-WP_000767329.1;Parent=gene-AB11_RS01720;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AB11_RS01720;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 10289 13105 . + . ID=gene-AB11_RS01725;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AB11_RS01725;old_locus_tag=AB11_0009 NZ_JHDH01000081.1 Protein Homology CDS 10289 13105 . + 0 ID=cds-WP_001286865.1;Parent=gene-AB11_RS01725;Dbxref=GenBank:WP_001286865.1;Name=WP_001286865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AB11_RS01725;product=isoleucine--tRNA ligase;protein_id=WP_001286865.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 13105 13599 . + . ID=gene-AB11_RS01730;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AB11_RS01730;old_locus_tag=AB11_0010 NZ_JHDH01000081.1 Protein Homology CDS 13105 13599 . + 0 ID=cds-WP_000083369.1;Parent=gene-AB11_RS01730;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AB11_RS01730;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 13724 14173 . + . ID=gene-AB11_RS01735;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AB11_RS01735;old_locus_tag=AB11_0011 NZ_JHDH01000081.1 Protein Homology CDS 13724 14173 . + 0 ID=cds-WP_000004655.1;Parent=gene-AB11_RS01735;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AB11_RS01735;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 14175 15125 . + . ID=gene-AB11_RS01740;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AB11_RS01740;old_locus_tag=AB11_0012 NZ_JHDH01000081.1 Protein Homology CDS 14175 15125 . + 0 ID=cds-WP_001166395.1;Parent=gene-AB11_RS01740;Dbxref=GenBank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AB11_RS01740;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 15191 16105 . + . ID=gene-AB11_RS01745;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AB11_RS01745;old_locus_tag=AB11_0013 NZ_JHDH01000081.1 Protein Homology CDS 15191 16105 . + 0 ID=cds-WP_032222883.1;Parent=gene-AB11_RS01745;Dbxref=GenBank:WP_032222883.1;Name=WP_032222883.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705986.1;locus_tag=AB11_RS01745;product=ribonucleoside hydrolase RihC;protein_id=WP_032222883.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 16272 17093 . + . ID=gene-AB11_RS01750;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AB11_RS01750;old_locus_tag=AB11_0014 NZ_JHDH01000081.1 Protein Homology CDS 16272 17093 . + 0 ID=cds-WP_000543586.1;Parent=gene-AB11_RS01750;Dbxref=GenBank:WP_000543586.1;Name=WP_000543586.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705987.1;locus_tag=AB11_RS01750;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543586.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 17549 18697 . + . ID=gene-AB11_RS01755;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AB11_RS01755;old_locus_tag=AB11_0016 NZ_JHDH01000081.1 Protein Homology CDS 17549 18697 . + 0 ID=cds-WP_001351917.1;Parent=gene-AB11_RS01755;Dbxref=GenBank:WP_001351917.1;Name=WP_001351917.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AB11_RS01755;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_001351917.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 18715 21936 . + . ID=gene-AB11_RS01760;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AB11_RS01760;old_locus_tag=AB11_0017 NZ_JHDH01000081.1 Protein Homology CDS 18715 21936 . + 0 ID=cds-WP_032222886.1;Parent=gene-AB11_RS01760;Dbxref=GenBank:WP_032222886.1;Name=WP_032222886.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AB11_RS01760;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_032222886.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 22198 22593 . + . ID=gene-AB11_RS01765;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AB11_RS01765;old_locus_tag=AB11_0019 NZ_JHDH01000081.1 Protein Homology CDS 22198 22593 . + 0 ID=cds-WP_000333125.1;Parent=gene-AB11_RS01765;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AB11_RS01765;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 22802 23392 . - . ID=gene-AB11_RS01770;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AB11_RS01770;old_locus_tag=AB11_0020 NZ_JHDH01000081.1 Protein Homology CDS 22802 23392 . - 0 ID=cds-WP_012304918.1;Parent=gene-AB11_RS01770;Dbxref=GenBank:WP_012304918.1;Name=WP_012304918.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AB11_RS01770;product=carnitine operon protein CaiE;protein_id=WP_012304918.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 23398 24183 . - . ID=gene-AB11_RS01775;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AB11_RS01775;old_locus_tag=AB11_0021 NZ_JHDH01000081.1 Protein Homology CDS 23398 24183 . - 0 ID=cds-WP_001295419.1;Parent=gene-AB11_RS01775;Dbxref=GenBank:WP_001295419.1;Name=WP_001295419.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AB11_RS01775;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 24292 25845 . - . ID=gene-AB11_RS01780;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AB11_RS01780;old_locus_tag=AB11_0022 NZ_JHDH01000081.1 Protein Homology CDS 24292 25845 . - 0 ID=cds-WP_001338228.1;Parent=gene-AB11_RS01780;Dbxref=GenBank:WP_001338228.1;Name=WP_001338228.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414579.4;locus_tag=AB11_RS01780;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001338228.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 25919 27136 . - . ID=gene-AB11_RS01785;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AB11_RS01785;old_locus_tag=AB11_0023 NZ_JHDH01000081.1 Protein Homology CDS 25919 27136 . - 0 ID=cds-WP_000349924.1;Parent=gene-AB11_RS01785;Dbxref=GenBank:WP_000349924.1;Name=WP_000349924.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308068.1;locus_tag=AB11_RS01785;product=L-carnitine CoA-transferase;protein_id=WP_000349924.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 27265 28407 . - . ID=gene-AB11_RS01790;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AB11_RS01790;old_locus_tag=AB11_0024 NZ_JHDH01000081.1 Protein Homology CDS 27265 28407 . - 0 ID=cds-WP_000347117.1;Parent=gene-AB11_RS01790;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AB11_RS01790;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 28438 29952 . - . ID=gene-AB11_RS01795;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AB11_RS01795;old_locus_tag=AB11_0025 NZ_JHDH01000081.1 Protein Homology CDS 28438 29952 . - 0 ID=cds-WP_000787103.1;Parent=gene-AB11_RS01795;Dbxref=GenBank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AB11_RS01795;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 30425 31195 . + . ID=gene-AB11_RS01800;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AB11_RS01800;old_locus_tag=AB11_0026 NZ_JHDH01000081.1 Protein Homology CDS 30425 31195 . + 0 ID=cds-WP_000692206.1;Parent=gene-AB11_RS01800;Dbxref=GenBank:WP_000692206.1;Name=WP_000692206.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AB11_RS01800;product=electron transfer flavoprotein FixA;protein_id=WP_000692206.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 31210 32151 . + . ID=gene-AB11_RS01805;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AB11_RS01805;old_locus_tag=AB11_0027 NZ_JHDH01000081.1 Protein Homology CDS 31210 32151 . + 0 ID=cds-WP_001091528.1;Parent=gene-AB11_RS01805;Dbxref=GenBank:WP_001091528.1;Name=WP_001091528.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AB11_RS01805;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001091528.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 32202 33488 . + . ID=gene-AB11_RS01810;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AB11_RS01810;old_locus_tag=AB11_0028 NZ_JHDH01000081.1 Protein Homology CDS 32202 33488 . + 0 ID=cds-WP_001287715.1;Parent=gene-AB11_RS01810;Dbxref=GenBank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AB11_RS01810;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 33485 33772 . + . ID=gene-AB11_RS01815;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AB11_RS01815;old_locus_tag=AB11_0029 NZ_JHDH01000081.1 Protein Homology CDS 33485 33772 . + 0 ID=cds-WP_021570590.1;Parent=gene-AB11_RS01815;Dbxref=GenBank:WP_021570590.1;Name=WP_021570590.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AB11_RS01815;product=ferredoxin-like protein FixX;protein_id=WP_021570590.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 33831 35162 . + . ID=gene-AB11_RS01820;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=AB11_RS01820;old_locus_tag=AB11_0030 NZ_JHDH01000081.1 Protein Homology CDS 33831 35162 . + 0 ID=cds-WP_001183198.1;Parent=gene-AB11_RS01820;Dbxref=GenBank:WP_001183198.1;Name=WP_001183198.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AB11_RS01820;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 35270 35800 . + . ID=gene-AB11_RS01825;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AB11_RS01825;old_locus_tag=AB11_0031 NZ_JHDH01000081.1 Protein Homology CDS 35270 35800 . + 0 ID=cds-WP_000600725.1;Parent=gene-AB11_RS01825;Dbxref=GenBank:WP_000600725.1;Name=WP_000600725.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=AB11_RS01825;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 35793 37655 . + . ID=gene-AB11_RS01830;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AB11_RS01830;old_locus_tag=AB11_0032 NZ_JHDH01000081.1 Protein Homology CDS 35793 37655 . + 0 ID=cds-WP_021570591.1;Parent=gene-AB11_RS01830;Dbxref=GenBank:WP_021570591.1;Name=WP_021570591.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AB11_RS01830;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_021570591.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 37847 38326 . + . ID=gene-AB11_RS01835;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AB11_RS01835;old_locus_tag=AB11_0033 NZ_JHDH01000081.1 Protein Homology CDS 37847 38326 . + 0 ID=cds-WP_000624375.1;Parent=gene-AB11_RS01835;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AB11_RS01835;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 38404 39246 . - . ID=gene-AB11_RS01840;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AB11_RS01840;old_locus_tag=AB11_0034 NZ_JHDH01000081.1 Protein Homology CDS 38404 39246 . - 0 ID=cds-WP_000257192.1;Parent=gene-AB11_RS01840;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AB11_RS01840;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 39253 39630 . - . ID=gene-AB11_RS01845;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AB11_RS01845;old_locus_tag=AB11_0035 NZ_JHDH01000081.1 Protein Homology CDS 39253 39630 . - 0 ID=cds-WP_000610901.1;Parent=gene-AB11_RS01845;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AB11_RS01845;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 39633 40454 . - . ID=gene-AB11_RS01850;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AB11_RS01850;old_locus_tag=AB11_0036 NZ_JHDH01000081.1 Protein Homology CDS 39633 40454 . - 0 ID=cds-WP_001065381.1;Parent=gene-AB11_RS01850;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AB11_RS01850;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 40451 41440 . - . ID=gene-AB11_RS01855;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AB11_RS01855;old_locus_tag=AB11_0037 NZ_JHDH01000081.1 Protein Homology CDS 40451 41440 . - 0 ID=cds-WP_000241277.1;Parent=gene-AB11_RS01855;Dbxref=GenBank:WP_000241277.1;Name=WP_000241277.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414594.1;locus_tag=AB11_RS01855;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241277.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 41440 42726 . - . ID=gene-AB11_RS01860;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AB11_RS01860;old_locus_tag=AB11_0038 NZ_JHDH01000081.1 Protein Homology CDS 41440 42726 . - 0 ID=cds-WP_000800457.1;Parent=gene-AB11_RS01860;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AB11_RS01860;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 42779 45133 . - . ID=gene-AB11_RS01865;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AB11_RS01865;old_locus_tag=AB11_0039 NZ_JHDH01000081.1 Protein Homology CDS 42779 45133 . - 0 ID=cds-WP_000746151.1;Parent=gene-AB11_RS01865;Dbxref=GenBank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AB11_RS01865;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 45388 46203 . + . ID=gene-AB11_RS01870;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AB11_RS01870;old_locus_tag=AB11_0040 NZ_JHDH01000081.1 Protein Homology CDS 45388 46203 . + 0 ID=cds-WP_001200579.1;Parent=gene-AB11_RS01870;Dbxref=GenBank:WP_001200579.1;Name=WP_001200579.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AB11_RS01870;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 46498 47164 . + . ID=gene-AB11_RS01875;Name=yabP;gbkey=Gene;gene=yabP;gene_biotype=pseudogene;locus_tag=AB11_RS01875;old_locus_tag=AB11_0041;pseudo=true NZ_JHDH01000081.1 Protein Homology CDS 46498 47164 . + 0 ID=cds-AB11_RS01875;Parent=gene-AB11_RS01875;Note=frameshifted;gbkey=CDS;gene=yabP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518734.1;locus_tag=AB11_RS01875;product=protein YabP;pseudo=true;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 47161 47319 . + . ID=gene-AB11_RS01880;Name=yabQ;gbkey=Gene;gene=yabQ;gene_biotype=protein_coding;locus_tag=AB11_RS01880 NZ_JHDH01000081.1 GeneMarkS-2+ CDS 47161 47319 . + 0 ID=cds-WP_001393554.1;Parent=gene-AB11_RS01880;Dbxref=GenBank:WP_001393554.1;Name=WP_001393554.1;gbkey=CDS;gene=yabQ;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS01880;product=protein YabQ;protein_id=WP_001393554.1;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 47336 47514 . - . ID=gene-AB11_RS01885;Name=AB11_RS01885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS01885;partial=true;pseudo=true;start_range=.,47336 NZ_JHDH01000081.1 Protein Homology CDS 47336 47514 . - 0 ID=cds-AB11_RS01885;Parent=gene-AB11_RS01885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244358.1;locus_tag=AB11_RS01885;partial=true;product=transposase DNA-binding-containing protein;pseudo=true;start_range=.,47336;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 47727 48386 . - . ID=gene-AB11_RS01890;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AB11_RS01890;old_locus_tag=AB11_0042 NZ_JHDH01000081.1 Protein Homology CDS 47727 48386 . - 0 ID=cds-WP_000525176.1;Parent=gene-AB11_RS01890;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AB11_RS01890;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 48398 51304 . - . ID=gene-AB11_RS01895;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AB11_RS01895;old_locus_tag=AB11_0043 NZ_JHDH01000081.1 Protein Homology CDS 48398 51304 . - 0 ID=cds-WP_001117011.1;Parent=gene-AB11_RS01895;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AB11_RS01895;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 51469 53820 . - . ID=gene-AB11_RS01900;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AB11_RS01900;old_locus_tag=AB11_0044 NZ_JHDH01000081.1 Protein Homology CDS 51469 53820 . - 0 ID=cds-WP_000035670.1;Parent=gene-AB11_RS01900;Dbxref=GenBank:WP_000035670.1;Name=WP_000035670.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=AB11_RS01900;product=DNA polymerase II;protein_id=WP_000035670.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 53895 54590 . - . ID=gene-AB11_RS01905;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB11_RS01905;old_locus_tag=AB11_0045 NZ_JHDH01000081.1 Protein Homology CDS 53895 54590 . - 0 ID=cds-WP_000888666.1;Parent=gene-AB11_RS01905;Dbxref=GenBank:WP_000888666.1;Name=WP_000888666.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AB11_RS01905;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 54790 56292 . - . ID=gene-AB11_RS01910;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AB11_RS01910;old_locus_tag=AB11_0046 NZ_JHDH01000081.1 Protein Homology CDS 54790 56292 . - 0 ID=cds-WP_000151748.1;Parent=gene-AB11_RS01910;Dbxref=GenBank:WP_000151748.1;Name=WP_000151748.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414604.1;locus_tag=AB11_RS01910;product=L-arabinose isomerase;protein_id=WP_000151748.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 56303 58003 . - . ID=gene-AB11_RS01915;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AB11_RS01915;old_locus_tag=AB11_0047 NZ_JHDH01000081.1 Protein Homology CDS 56303 58003 . - 0 ID=cds-WP_000951856.1;Parent=gene-AB11_RS01915;Dbxref=GenBank:WP_000951856.1;Name=WP_000951856.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AB11_RS01915;product=ribulokinase;protein_id=WP_000951856.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 58342 59220 . + . ID=gene-AB11_RS01920;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AB11_RS01920;old_locus_tag=AB11_0048 NZ_JHDH01000081.1 Protein Homology CDS 58342 59220 . + 0 ID=cds-WP_001300811.1;Parent=gene-AB11_RS01920;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AB11_RS01920;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 59306 60070 . + . ID=gene-AB11_RS01925;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AB11_RS01925;old_locus_tag=AB11_0049 NZ_JHDH01000081.1 Protein Homology CDS 59306 60070 . + 0 ID=cds-WP_001148390.1;Parent=gene-AB11_RS01925;Dbxref=GenBank:WP_001148390.1;Name=WP_001148390.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414607.1;locus_tag=AB11_RS01925;product=DedA family protein;protein_id=WP_001148390.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 60184 60882 . - . ID=gene-AB11_RS01930;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AB11_RS01930;old_locus_tag=AB11_0050 NZ_JHDH01000081.1 Protein Homology CDS 60184 60882 . - 0 ID=cds-WP_000916281.1;Parent=gene-AB11_RS01930;Dbxref=GenBank:WP_000916281.1;Name=WP_000916281.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414608.1;locus_tag=AB11_RS01930;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916281.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 60866 62476 . - . ID=gene-AB11_RS01935;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AB11_RS01935;old_locus_tag=AB11_0051 NZ_JHDH01000081.1 Protein Homology CDS 60866 62476 . - 0 ID=cds-WP_000235721.1;Parent=gene-AB11_RS01935;Dbxref=GenBank:WP_000235721.1;Name=WP_000235721.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414609.1;locus_tag=AB11_RS01935;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235721.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 62452 63435 . - . ID=gene-AB11_RS01940;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AB11_RS01940;old_locus_tag=AB11_0052 NZ_JHDH01000081.1 Protein Homology CDS 62452 63435 . - 0 ID=cds-WP_001301364.1;Parent=gene-AB11_RS01940;Dbxref=GenBank:WP_001301364.1;Name=WP_001301364.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AB11_RS01940;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001301364.1;transl_table=11 NZ_JHDH01000081.1 cmsearch riboswitch 63466 63565 . - . ID=id-NZ_JHDH01000081.1:63466..63565;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000081.1 RefSeq gene 63599 65254 . - . ID=gene-AB11_RS01945;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AB11_RS01945;old_locus_tag=AB11_0053 NZ_JHDH01000081.1 Protein Homology CDS 63599 65254 . - 0 ID=cds-WP_001138624.1;Parent=gene-AB11_RS01945;Dbxref=GenBank:WP_001138624.1;Name=WP_001138624.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414611.1;locus_tag=AB11_RS01945;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001138624.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 65343 65474 . + . ID=gene-AB11_RS01950;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AB11_RS01950;old_locus_tag=AB11_0054 NZ_JHDH01000081.1 Protein Homology CDS 65343 65474 . + 0 ID=cds-WP_001248770.1;Parent=gene-AB11_RS01950;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AB11_RS01950;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 65576 66754 . + . ID=gene-AB11_RS01955;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AB11_RS01955;old_locus_tag=AB11_0055 NZ_JHDH01000081.1 Protein Homology CDS 65576 66754 . + 0 ID=cds-WP_000637847.1;Parent=gene-AB11_RS01955;Dbxref=GenBank:WP_000637847.1;Name=WP_000637847.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AB11_RS01955;product=sugar efflux transporter SetA;protein_id=WP_000637847.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 66803 67408 . - . ID=gene-AB11_RS01960;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AB11_RS01960;old_locus_tag=AB11_0056 NZ_JHDH01000081.1 Protein Homology CDS 66803 67408 . - 0 ID=cds-WP_000818228.1;Parent=gene-AB11_RS01960;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AB11_RS01960;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 67419 68819 . - . ID=gene-AB11_RS01965;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AB11_RS01965;old_locus_tag=AB11_0057 NZ_JHDH01000081.1 Protein Homology CDS 67419 68819 . - 0 ID=cds-WP_001140652.1;Parent=gene-AB11_RS01965;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AB11_RS01965;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 68822 69913 . - . ID=gene-AB11_RS01970;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AB11_RS01970;old_locus_tag=AB11_0058 NZ_JHDH01000081.1 Protein Homology CDS 68822 69913 . - 0 ID=cds-WP_000042353.1;Parent=gene-AB11_RS01970;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AB11_RS01970;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 69913 71484 . - . ID=gene-AB11_RS01975;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AB11_RS01975;old_locus_tag=AB11_0059 NZ_JHDH01000081.1 Protein Homology CDS 69913 71484 . - 0 ID=cds-WP_000082850.1;Parent=gene-AB11_RS01975;Dbxref=GenBank:WP_000082850.1;Name=WP_000082850.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AB11_RS01975;product=2-isopropylmalate synthase;protein_id=WP_000082850.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 71577 71663 . - . ID=gene-AB11_RS01980;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AB11_RS01980 NZ_JHDH01000081.1 Protein Homology CDS 71577 71663 . - 0 ID=cds-WP_001300467.1;Parent=gene-AB11_RS01980;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AB11_RS01980;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 72324 73268 . + . ID=gene-AB11_RS01985;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AB11_RS01985;old_locus_tag=AB11_0061 NZ_JHDH01000081.1 Protein Homology CDS 72324 73268 . + 0 ID=cds-WP_021570594.1;Parent=gene-AB11_RS01985;Dbxref=GenBank:WP_021570594.1;Name=WP_021570594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AB11_RS01985;product=transcriptional regulator LeuO;protein_id=WP_021570594.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 73423 73467 . - . ID=gene-AB11_RS01990;Name=AB11_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS01990 NZ_JHDH01000081.1 Protein Homology CDS 73423 73467 . - 0 ID=cds-WP_120795371.1;Parent=gene-AB11_RS01990;Dbxref=GenBank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AB11_RS01990;product=protein YabR;protein_id=WP_120795371.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 73586 75310 . + . ID=gene-AB11_RS01995;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AB11_RS01995;old_locus_tag=AB11_0062 NZ_JHDH01000081.1 Protein Homology CDS 73586 75310 . + 0 ID=cds-WP_001295534.1;Parent=gene-AB11_RS01995;Dbxref=GenBank:WP_001295534.1;Name=WP_001295534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AB11_RS01995;product=acetolactate synthase 3 large subunit;protein_id=WP_001295534.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 75313 75804 . + . ID=gene-AB11_RS02000;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB11_RS02000;old_locus_tag=AB11_0063 NZ_JHDH01000081.1 Protein Homology CDS 75313 75804 . + 0 ID=cds-WP_001300383.1;Parent=gene-AB11_RS02000;Dbxref=GenBank:WP_001300383.1;Name=WP_001300383.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AB11_RS02000;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 75816 75902 . + . ID=gene-AB11_RS02005;Name=AB11_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02005 NZ_JHDH01000081.1 Protein Homology CDS 75816 75902 . + 0 ID=cds-WP_001303787.1;Parent=gene-AB11_RS02005;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AB11_RS02005;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 75984 76988 . + . ID=gene-AB11_RS02010;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AB11_RS02010;old_locus_tag=AB11_0064 NZ_JHDH01000081.1 Protein Homology CDS 75984 76988 . + 0 ID=cds-WP_000762401.1;Parent=gene-AB11_RS02010;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AB11_RS02010;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 77590 78048 . + . ID=gene-AB11_RS02015;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AB11_RS02015;old_locus_tag=AB11_0066 NZ_JHDH01000081.1 Protein Homology CDS 77590 78048 . + 0 ID=cds-WP_001295533.1;Parent=gene-AB11_RS02015;Dbxref=GenBank:WP_001295533.1;Name=WP_001295533.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AB11_RS02015;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295533.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 78050 78991 . + . ID=gene-AB11_RS02020;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AB11_RS02020;old_locus_tag=AB11_0067 NZ_JHDH01000081.1 Protein Homology CDS 78050 78991 . + 0 ID=cds-WP_000970479.1;Parent=gene-AB11_RS02020;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AB11_RS02020;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 78988 79353 . + . ID=gene-AB11_RS02025;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AB11_RS02025;old_locus_tag=AB11_0068 NZ_JHDH01000081.1 Protein Homology CDS 78988 79353 . + 0 ID=cds-WP_000625658.1;Parent=gene-AB11_RS02025;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AB11_RS02025;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 79369 81135 . + . ID=gene-AB11_RS02030;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AB11_RS02030;old_locus_tag=AB11_0069 NZ_JHDH01000081.1 Protein Homology CDS 79369 81135 . + 0 ID=cds-WP_000642196.1;Parent=gene-AB11_RS02030;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AB11_RS02030;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 81122 82609 . + . ID=gene-AB11_RS02035;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AB11_RS02035;old_locus_tag=AB11_0070 NZ_JHDH01000081.1 Protein Homology CDS 81122 82609 . + 0 ID=cds-WP_032222889.1;Parent=gene-AB11_RS02035;Dbxref=GenBank:WP_032222889.1;Name=WP_032222889.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=AB11_RS02035;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_032222889.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 82606 83964 . + . ID=gene-AB11_RS02040;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AB11_RS02040;old_locus_tag=AB11_0071 NZ_JHDH01000081.1 Protein Homology CDS 82606 83964 . + 0 ID=cds-WP_000626685.1;Parent=gene-AB11_RS02040;Dbxref=GenBank:WP_000626685.1;Name=WP_000626685.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AB11_RS02040;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626685.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 83958 85040 . + . ID=gene-AB11_RS02045;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AB11_RS02045;old_locus_tag=AB11_0072 NZ_JHDH01000081.1 Protein Homology CDS 83958 85040 . + 0 ID=cds-WP_000964131.1;Parent=gene-AB11_RS02045;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AB11_RS02045;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 85043 86359 . + . ID=gene-AB11_RS02050;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AB11_RS02050;old_locus_tag=AB11_0073 NZ_JHDH01000081.1 Protein Homology CDS 85043 86359 . + 0 ID=cds-WP_000796481.1;Parent=gene-AB11_RS02050;Dbxref=GenBank:WP_000796481.1;Name=WP_000796481.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AB11_RS02050;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 86359 87603 . + . ID=gene-AB11_RS02055;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AB11_RS02055;old_locus_tag=AB11_0074 NZ_JHDH01000081.1 Protein Homology CDS 86359 87603 . + 0 ID=cds-WP_001295532.1;Parent=gene-AB11_RS02055;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AB11_RS02055;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 87600 88667 . + . ID=gene-AB11_RS02060;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AB11_RS02060;old_locus_tag=AB11_0075 NZ_JHDH01000081.1 Protein Homology CDS 87600 88667 . + 0 ID=cds-WP_000016560.1;Parent=gene-AB11_RS02060;Dbxref=GenBank:WP_000016560.1;Name=WP_000016560.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AB11_RS02060;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016560.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 88721 90196 . + . ID=gene-AB11_RS02065;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AB11_RS02065;old_locus_tag=AB11_0076 NZ_JHDH01000081.1 Protein Homology CDS 88721 90196 . + 0 ID=cds-WP_001096049.1;Parent=gene-AB11_RS02065;Dbxref=GenBank:WP_001096049.1;Name=WP_001096049.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AB11_RS02065;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096049.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 90189 91109 . + . ID=gene-AB11_RS02070;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AB11_RS02070;old_locus_tag=AB11_0077 NZ_JHDH01000081.1 Protein Homology CDS 90189 91109 . + 0 ID=cds-WP_000130056.1;Parent=gene-AB11_RS02070;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AB11_RS02070;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 91111 91941 . + . ID=gene-AB11_RS02075;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AB11_RS02075;old_locus_tag=AB11_0078 NZ_JHDH01000081.1 Protein Homology CDS 91111 91941 . + 0 ID=cds-WP_032222892.1;Parent=gene-AB11_RS02075;Dbxref=GenBank:WP_032222892.1;Name=WP_032222892.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414635.1;locus_tag=AB11_RS02075;product=cell division protein FtsQ;protein_id=WP_032222892.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 91938 93200 . + . ID=gene-AB11_RS02080;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AB11_RS02080;old_locus_tag=AB11_0079 NZ_JHDH01000081.1 Protein Homology CDS 91938 93200 . + 0 ID=cds-WP_000588474.1;Parent=gene-AB11_RS02080;Dbxref=GenBank:WP_000588474.1;Name=WP_000588474.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AB11_RS02080;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 93261 94412 . + . ID=gene-AB11_RS02085;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AB11_RS02085;old_locus_tag=AB11_0080 NZ_JHDH01000081.1 Protein Homology CDS 93261 94412 . + 0 ID=cds-WP_000462776.1;Parent=gene-AB11_RS02085;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AB11_RS02085;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 94513 95430 . + . ID=gene-AB11_RS02090;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AB11_RS02090;old_locus_tag=AB11_0081 NZ_JHDH01000081.1 Protein Homology CDS 94513 95430 . + 0 ID=cds-WP_000595482.1;Parent=gene-AB11_RS02090;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AB11_RS02090;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 95661 96173 . + . ID=gene-AB11_RS02095;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AB11_RS02095;old_locus_tag=AB11_0082 NZ_JHDH01000081.1 Protein Homology CDS 95661 96173 . + 0 ID=cds-WP_000014321.1;Parent=gene-AB11_RS02095;Dbxref=GenBank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AB11_RS02095;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 96235 98940 . + . ID=gene-AB11_RS02100;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AB11_RS02100;old_locus_tag=AB11_0083 NZ_JHDH01000081.1 Protein Homology CDS 96235 98940 . + 0 ID=cds-WP_000905789.1;Parent=gene-AB11_RS02100;Dbxref=GenBank:WP_000905789.1;Name=WP_000905789.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414640.1;locus_tag=AB11_RS02100;product=preprotein translocase subunit SecA;protein_id=WP_000905789.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 99000 99389 . + . ID=gene-AB11_RS02105;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AB11_RS02105;old_locus_tag=AB11_0084 NZ_JHDH01000081.1 Protein Homology CDS 99000 99389 . + 0 ID=cds-WP_000736007.1;Parent=gene-AB11_RS02105;Dbxref=GenBank:WP_000736007.1;Name=WP_000736007.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AB11_RS02105;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736007.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 99605 99802 . - . ID=gene-AB11_RS02110;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AB11_RS02110;old_locus_tag=AB11_0085 NZ_JHDH01000081.1 Protein Homology CDS 99605 99802 . - 0 ID=cds-WP_000005042.1;Parent=gene-AB11_RS02110;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AB11_RS02110;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 99812 100555 . - . ID=gene-AB11_RS02115;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AB11_RS02115;old_locus_tag=AB11_0086 NZ_JHDH01000081.1 Protein Homology CDS 99812 100555 . - 0 ID=cds-WP_001194734.1;Parent=gene-AB11_RS02115;Dbxref=GenBank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AB11_RS02115;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 100555 101175 . - . ID=gene-AB11_RS02120;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AB11_RS02120;old_locus_tag=AB11_0087 NZ_JHDH01000081.1 Protein Homology CDS 100555 101175 . - 0 ID=cds-WP_001269520.1;Parent=gene-AB11_RS02120;Dbxref=GenBank:WP_001269520.1;Name=WP_001269520.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AB11_RS02120;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 101200 101244 . + . ID=gene-AB11_RS25165;Name=AB11_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25165 NZ_JHDH01000081.1 Protein Homology CDS 101200 101244 . + 0 ID=cds-WP_120795372.1;Parent=gene-AB11_RS25165;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AB11_RS25165;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 101400 102443 . + . ID=gene-AB11_RS02125;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AB11_RS02125;old_locus_tag=AB11_0088 NZ_JHDH01000081.1 Protein Homology CDS 101400 102443 . + 0 ID=cds-WP_001217338.1;Parent=gene-AB11_RS02125;Dbxref=GenBank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AB11_RS02125;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 102478 103680 . - . ID=gene-AB11_RS02130;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AB11_RS02130;old_locus_tag=AB11_0089 NZ_JHDH01000081.1 Protein Homology CDS 102478 103680 . - 0 ID=cds-WP_000157266.1;Parent=gene-AB11_RS02130;Dbxref=GenBank:WP_000157266.1;Name=WP_000157266.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=AB11_RS02130;product=protein transport protein HofC;protein_id=WP_000157266.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 103670 105055 . - . ID=gene-AB11_RS02135;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB11_RS02135;old_locus_tag=AB11_0090 NZ_JHDH01000081.1 Protein Homology CDS 103670 105055 . - 0 ID=cds-WP_021570596.1;Parent=gene-AB11_RS02135;Dbxref=GenBank:WP_021570596.1;Name=WP_021570596.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414649.1;locus_tag=AB11_RS02135;product=type II secretion system protein GspE;protein_id=WP_021570596.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 105065 105505 . - . ID=gene-AB11_RS02140;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AB11_RS02140;old_locus_tag=AB11_0091 NZ_JHDH01000081.1 Protein Homology CDS 105065 105505 . - 0 ID=cds-WP_000360904.1;Parent=gene-AB11_RS02140;Dbxref=GenBank:WP_000360904.1;Name=WP_000360904.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AB11_RS02140;product=prepilin peptidase-dependent pilin;protein_id=WP_000360904.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 105708 106601 . - . ID=gene-AB11_RS02145;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AB11_RS02145;old_locus_tag=AB11_0092 NZ_JHDH01000081.1 Protein Homology CDS 105708 106601 . - 0 ID=cds-WP_001135174.1;Parent=gene-AB11_RS02145;Dbxref=GenBank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AB11_RS02145;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 106689 107240 . + . ID=gene-AB11_RS02150;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AB11_RS02150;old_locus_tag=AB11_0093 NZ_JHDH01000081.1 Protein Homology CDS 106689 107240 . + 0 ID=cds-WP_000923721.1;Parent=gene-AB11_RS02150;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AB11_RS02150;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 107237 108091 . + . ID=gene-AB11_RS02155;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AB11_RS02155;old_locus_tag=AB11_0094 NZ_JHDH01000081.1 Protein Homology CDS 107237 108091 . + 0 ID=cds-WP_000172005.1;Parent=gene-AB11_RS02155;Dbxref=GenBank:WP_000172005.1;Name=WP_000172005.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AB11_RS02155;product=beta-lactamase regulator AmpE;protein_id=WP_000172005.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 108134 109507 . - . ID=gene-AB11_RS02160;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AB11_RS02160;old_locus_tag=AB11_0095 NZ_JHDH01000081.1 Protein Homology CDS 108134 109507 . - 0 ID=cds-WP_000969915.1;Parent=gene-AB11_RS02160;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AB11_RS02160;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 110048 110812 . + . ID=gene-AB11_RS02165;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AB11_RS02165;old_locus_tag=AB11_0096 NZ_JHDH01000081.1 Protein Homology CDS 110048 110812 . + 0 ID=cds-WP_000331776.1;Parent=gene-AB11_RS02165;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AB11_RS02165;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 110973 113636 . + . ID=gene-AB11_RS02170;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AB11_RS02170;old_locus_tag=AB11_0097 NZ_JHDH01000081.1 Protein Homology CDS 110973 113636 . + 0 ID=cds-WP_000003820.1;Parent=gene-AB11_RS02170;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AB11_RS02170;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 113651 115543 . + . ID=gene-AB11_RS02175;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AB11_RS02175;old_locus_tag=AB11_0098 NZ_JHDH01000081.1 Protein Homology CDS 113651 115543 . + 0 ID=cds-WP_000963518.1;Parent=gene-AB11_RS02175;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AB11_RS02175;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 115868 117292 . + . ID=gene-AB11_RS02180;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AB11_RS02180;old_locus_tag=AB11_0099 NZ_JHDH01000081.1 Protein Homology CDS 115868 117292 . + 0 ID=cds-WP_000102485.1;Parent=gene-AB11_RS02180;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AB11_RS02180;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 117363 119216 . - . ID=gene-AB11_RS02185;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AB11_RS02185;old_locus_tag=AB11_0100 NZ_JHDH01000081.1 Protein Homology CDS 117363 119216 . - 0 ID=cds-WP_000784471.1;Parent=gene-AB11_RS02185;Dbxref=GenBank:WP_000784471.1;Name=WP_000784471.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414659.1;locus_tag=AB11_RS02185;product=DUF3300 domain-containing protein;protein_id=WP_000784471.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 119571 122168 . + . ID=gene-AB11_RS02190;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AB11_RS02190;old_locus_tag=AB11_0101 NZ_JHDH01000081.1 Protein Homology CDS 119571 122168 . + 0 ID=cds-WP_001307570.1;Parent=gene-AB11_RS02190;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AB11_RS02190;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 122344 122706 . + . ID=gene-AB11_RS02195;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AB11_RS02195;old_locus_tag=AB11_0102 NZ_JHDH01000081.1 Protein Homology CDS 122344 122706 . + 0 ID=cds-WP_000384306.1;Parent=gene-AB11_RS02195;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AB11_RS02195;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 122744 123538 . - . ID=gene-AB11_RS02200;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AB11_RS02200;old_locus_tag=AB11_0103 NZ_JHDH01000081.1 Protein Homology CDS 122744 123538 . - 0 ID=cds-WP_000734287.1;Parent=gene-AB11_RS02200;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AB11_RS02200;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 123554 124420 . - . ID=gene-AB11_RS02205;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AB11_RS02205;old_locus_tag=AB11_0104 NZ_JHDH01000081.1 Protein Homology CDS 123554 124420 . - 0 ID=cds-WP_000818411.1;Parent=gene-AB11_RS02205;Dbxref=GenBank:WP_000818411.1;Name=WP_000818411.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AB11_RS02205;product=polyamine aminopropyltransferase;protein_id=WP_000818411.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 124526 124873 . - . ID=gene-AB11_RS02210;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AB11_RS02210;old_locus_tag=AB11_0105 NZ_JHDH01000081.1 Protein Homology CDS 124526 124873 . - 0 ID=cds-WP_001295568.1;Parent=gene-AB11_RS02210;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AB11_RS02210;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 125039 126589 . + . ID=gene-AB11_RS02215;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AB11_RS02215;old_locus_tag=AB11_0106 NZ_JHDH01000081.1 Protein Homology CDS 125039 126589 . + 0 ID=cds-WP_001189647.1;Parent=gene-AB11_RS02215;Dbxref=GenBank:WP_001189647.1;Name=WP_001189647.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AB11_RS02215;product=multicopper oxidase CueO;protein_id=WP_001189647.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 126791 129181 . - . ID=gene-AB11_RS02220;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AB11_RS02220;old_locus_tag=AB11_0107 NZ_JHDH01000081.1 Protein Homology CDS 126791 129181 . - 0 ID=cds-WP_001306211.1;Parent=gene-AB11_RS02220;Dbxref=GenBank:WP_001306211.1;Name=WP_001306211.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AB11_RS02220;product=quinoprotein glucose dehydrogenase;protein_id=WP_001306211.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 129387 129923 . + . ID=gene-AB11_RS02225;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AB11_RS02225;old_locus_tag=AB11_0108 NZ_JHDH01000081.1 Protein Homology CDS 129387 129923 . + 0 ID=cds-WP_000683335.1;Parent=gene-AB11_RS02225;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AB11_RS02225;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 129964 130626 . - . ID=gene-AB11_RS02230;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AB11_RS02230;old_locus_tag=AB11_0109 NZ_JHDH01000081.1 Protein Homology CDS 129964 130626 . - 0 ID=cds-WP_000651599.1;Parent=gene-AB11_RS02230;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AB11_RS02230;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 130735 131661 . + . ID=gene-AB11_RS02235;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AB11_RS02235;old_locus_tag=AB11_0110 NZ_JHDH01000081.1 Protein Homology CDS 130735 131661 . + 0 ID=cds-WP_000150637.1;Parent=gene-AB11_RS02235;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AB11_RS02235;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 131658 132428 . + . ID=gene-AB11_RS02240;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AB11_RS02240;old_locus_tag=AB11_0111 NZ_JHDH01000081.1 Protein Homology CDS 131658 132428 . + 0 ID=cds-WP_000972203.1;Parent=gene-AB11_RS02240;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AB11_RS02240;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 132533 132973 . + . ID=gene-AB11_RS02245;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AB11_RS02245;old_locus_tag=AB11_0112 NZ_JHDH01000081.1 Protein Homology CDS 132533 132973 . + 0 ID=cds-WP_000901987.1;Parent=gene-AB11_RS02245;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AB11_RS02245;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 133037 134266 . + . ID=gene-AB11_RS02250;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AB11_RS02250;old_locus_tag=AB11_0113 NZ_JHDH01000081.1 Protein Homology CDS 133037 134266 . + 0 ID=cds-WP_021570600.1;Parent=gene-AB11_RS02250;Dbxref=GenBank:WP_021570600.1;Name=WP_021570600.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AB11_RS02250;product=polysaccharide deacetylase family protein;protein_id=WP_021570600.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 134270 134650 . - . ID=gene-AB11_RS02255;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AB11_RS02255;old_locus_tag=AB11_0114 NZ_JHDH01000081.1 Protein Homology CDS 134270 134650 . - 0 ID=cds-WP_000621515.1;Parent=gene-AB11_RS02255;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AB11_RS02255;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 134924 135826 . + . ID=gene-AB11_RS02260;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AB11_RS02260;old_locus_tag=AB11_0116 NZ_JHDH01000081.1 Protein Homology CDS 134924 135826 . + 0 ID=cds-WP_021570601.1;Parent=gene-AB11_RS02260;Dbxref=GenBank:WP_021570601.1;Name=WP_021570601.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AB11_RS02260;product=recombination-promoting nuclease RpnC;protein_id=WP_021570601.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 135900 136751 . - . ID=gene-AB11_RS02265;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AB11_RS02265;old_locus_tag=AB11_0117 NZ_JHDH01000081.1 Protein Homology CDS 135900 136751 . - 0 ID=cds-WP_000905383.1;Parent=gene-AB11_RS02265;Dbxref=GenBank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AB11_RS02265;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JHDH01000081.1 RefSeq gene 136763 137557 . - . ID=gene-AB11_RS02270;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AB11_RS02270;old_locus_tag=AB11_0118 NZ_JHDH01000081.1 Protein Homology CDS 136763 137557 . - 0 ID=cds-WP_000805497.1;Parent=gene-AB11_RS02270;Dbxref=GenBank:WP_000805497.1;Name=WP_000805497.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AB11_RS02270;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 137671 138522 . - . ID=gene-AB11_RS02275;Name=yadC;end_range=138522,.;gbkey=Gene;gene=yadC;gene_biotype=pseudogene;locus_tag=AB11_RS02275;partial=true;pseudo=true NZ_JHDH01000081.1 Protein Homology CDS 137671 138522 . - 0 ID=cds-AB11_RS02275;Parent=gene-AB11_RS02275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=138522,.;gbkey=CDS;gene=yadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AB11_RS02275;partial=true;product=fimbrial tip-adhesin YadC;pseudo=true;transl_table=11 NZ_JHDH01000081.1 RefSeq pseudogene 138589 138985 . + . ID=gene-AB11_RS02280;Name=AB11_RS02280;end_range=138985,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02280;old_locus_tag=AB11_0120;partial=true;pseudo=true NZ_JHDH01000081.1 Protein Homology CDS 138589 138985 . + 0 ID=cds-AB11_RS02280;Parent=gene-AB11_RS02280;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=138985,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS02280;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000082.1 1 2665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000082.1 RefSeq region 1 2665 . + . ID=NZ_JHDH01000082.1:1..2665;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000082.1 RefSeq pseudogene 1 594 . + . ID=gene-AB11_RS02285;Name=AB11_RS02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02285;old_locus_tag=AB11_0122;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000082.1 Protein Homology CDS 1 594 . + 0 ID=cds-AB11_RS02285;Parent=gene-AB11_RS02285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS02285;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000082.1 RefSeq pseudogene 627 1013 . - . ID=gene-AB11_RS02290;Name=yadC;gbkey=Gene;gene=yadC;gene_biotype=pseudogene;locus_tag=AB11_RS02290;partial=true;pseudo=true;start_range=.,627 NZ_JHDH01000082.1 Protein Homology CDS 627 1013 . - 0 ID=cds-AB11_RS02290;Parent=gene-AB11_RS02290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AB11_RS02290;partial=true;product=fimbrial tip-adhesin YadC;pseudo=true;start_range=.,627;transl_table=11 NZ_JHDH01000082.1 RefSeq pseudogene 1063 1470 . - . ID=gene-AB11_RS02295;Name=AB11_RS02295;end_range=1470,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02295;partial=true;pseudo=true NZ_JHDH01000082.1 Protein Homology CDS 1063 1470 . - 0 ID=cds-AB11_RS02295;Parent=gene-AB11_RS02295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AB11_RS02295;partial=true;product=fimbrial-like protein;pseudo=true;transl_table=11 NZ_JHDH01000082.1 RefSeq gene 1539 2519 . + . ID=gene-AB11_RS02300;Name=AB11_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02300;old_locus_tag=AB11_0125 NZ_JHDH01000082.1 Protein Homology CDS 1539 2519 . + 0 ID=cds-WP_000019440.1-3;Parent=gene-AB11_RS02300;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS02300;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 ##sequence-region NZ_JHDH01000083.1 1 73688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000083.1 RefSeq region 1 73688 . + . ID=NZ_JHDH01000083.1:1..73688;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000083.1 RefSeq gene 1 958 . + . ID=gene-AB11_RS02305;Name=AB11_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02305;old_locus_tag=AB11_0126;partial=true;start_range=.,1 NZ_JHDH01000083.1 Protein Homology CDS 1 958 . + 1 ID=cds-WP_032222538.1-2;Parent=gene-AB11_RS02305;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS02305;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;start_range=.,1;transl_table=11 NZ_JHDH01000083.1 RefSeq pseudogene 1059 1424 . - . ID=gene-AB11_RS02310;Name=AB11_RS02310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02310;partial=true;pseudo=true;start_range=.,1059 NZ_JHDH01000083.1 Protein Homology CDS 1059 1424 . - 0 ID=cds-AB11_RS02310;Parent=gene-AB11_RS02310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AB11_RS02310;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1059;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 1441 4038 . - . ID=gene-AB11_RS02315;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AB11_RS02315;old_locus_tag=AB11_0129 NZ_JHDH01000083.1 Protein Homology CDS 1441 4038 . - 0 ID=cds-WP_000151605.1;Parent=gene-AB11_RS02315;Dbxref=GenBank:WP_000151605.1;Name=WP_000151605.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AB11_RS02315;product=Yad fimbria usher protein HtrE;protein_id=WP_000151605.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 4073 4813 . - . ID=gene-AB11_RS02320;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;locus_tag=AB11_RS02320;old_locus_tag=AB11_0130 NZ_JHDH01000083.1 Protein Homology CDS 4073 4813 . - 0 ID=cds-WP_000465928.1;Parent=gene-AB11_RS02320;Dbxref=GenBank:WP_000465928.1;Name=WP_000465928.1;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AB11_RS02320;product=fimbrial chaperone;protein_id=WP_000465928.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 4911 5495 . - . ID=gene-AB11_RS02325;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AB11_RS02325;old_locus_tag=AB11_0132 NZ_JHDH01000083.1 Protein Homology CDS 4911 5495 . - 0 ID=cds-WP_000038438.1;Parent=gene-AB11_RS02325;Dbxref=GenBank:WP_000038438.1;Name=WP_000038438.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AB11_RS02325;product=fimbrial protein;protein_id=WP_000038438.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 5865 6344 . - . ID=gene-AB11_RS02330;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AB11_RS02330;old_locus_tag=AB11_0133 NZ_JHDH01000083.1 Protein Homology CDS 5865 6344 . - 0 ID=cds-WP_000215139.1;Parent=gene-AB11_RS02330;Dbxref=GenBank:WP_000215139.1;Name=WP_000215139.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414684.1;locus_tag=AB11_RS02330;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215139.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 6341 7738 . - . ID=gene-AB11_RS02335;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AB11_RS02335;old_locus_tag=AB11_0134 NZ_JHDH01000083.1 Protein Homology CDS 6341 7738 . - 0 ID=cds-WP_204361803.1;Parent=gene-AB11_RS02335;Dbxref=GenBank:WP_204361803.1;Name=WP_204361803.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AB11_RS02335;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204361803.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 7798 8694 . - . ID=gene-AB11_RS02340;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AB11_RS02340;old_locus_tag=AB11_0135 NZ_JHDH01000083.1 Protein Homology CDS 7798 8694 . - 0 ID=cds-WP_001506876.1;Parent=gene-AB11_RS02340;Dbxref=GenBank:WP_001506876.1;Name=WP_001506876.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AB11_RS02340;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_001506876.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 8761 9216 . - . ID=gene-AB11_RS02345;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AB11_RS02345;old_locus_tag=AB11_0136 NZ_JHDH01000083.1 Protein Homology CDS 8761 9216 . - 0 ID=cds-WP_001155227.1;Parent=gene-AB11_RS02345;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AB11_RS02345;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 9394 10098 . - . ID=gene-AB11_RS02350;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AB11_RS02350;old_locus_tag=AB11_0137 NZ_JHDH01000083.1 Protein Homology CDS 9394 10098 . - 0 ID=cds-WP_000396036.1;Parent=gene-AB11_RS02350;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AB11_RS02350;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 10113 10643 . - . ID=gene-AB11_RS02355;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AB11_RS02355;old_locus_tag=AB11_0138 NZ_JHDH01000083.1 Protein Homology CDS 10113 10643 . - 0 ID=cds-WP_001294700.1;Parent=gene-AB11_RS02355;Dbxref=GenBank:WP_001294700.1;Name=WP_001294700.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AB11_RS02355;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 10717 13146 . + . ID=gene-AB11_RS02360;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AB11_RS02360;old_locus_tag=AB11_0139 NZ_JHDH01000083.1 Protein Homology CDS 10717 13146 . + 0 ID=cds-WP_021570605.1;Parent=gene-AB11_RS02360;Dbxref=GenBank:WP_021570605.1;Name=WP_021570605.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AB11_RS02360;product=ATP-dependent helicase HrpB;protein_id=WP_021570605.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 13342 15876 . + . ID=gene-AB11_RS02365;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AB11_RS02365;old_locus_tag=AB11_0140 NZ_JHDH01000083.1 Protein Homology CDS 13342 15876 . + 0 ID=cds-WP_000918162.1;Parent=gene-AB11_RS02365;Dbxref=GenBank:WP_000918162.1;Name=WP_000918162.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414691.1;locus_tag=AB11_RS02365;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918162.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 16096 18339 . + . ID=gene-AB11_RS02370;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AB11_RS02370;old_locus_tag=AB11_0142 NZ_JHDH01000083.1 Protein Homology CDS 16096 18339 . + 0 ID=cds-WP_032222915.1;Parent=gene-AB11_RS02370;Dbxref=GenBank:WP_032222915.1;Name=WP_032222915.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AB11_RS02370;product=ferrichrome porin FhuA;protein_id=WP_032222915.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 18390 19187 . + . ID=gene-AB11_RS02375;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AB11_RS02375;old_locus_tag=AB11_0143 NZ_JHDH01000083.1 Protein Homology CDS 18390 19187 . + 0 ID=cds-WP_001158931.1;Parent=gene-AB11_RS02375;Dbxref=GenBank:WP_001158931.1;Name=WP_001158931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AB11_RS02375;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 19187 20077 . + . ID=gene-AB11_RS02380;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AB11_RS02380;old_locus_tag=AB11_0144 NZ_JHDH01000083.1 Protein Homology CDS 19187 20077 . + 0 ID=cds-WP_001310529.1;Parent=gene-AB11_RS02380;Dbxref=GenBank:WP_001310529.1;Name=WP_001310529.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AB11_RS02380;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001310529.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 20074 22056 . + . ID=gene-AB11_RS02385;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AB11_RS02385;old_locus_tag=AB11_0145 NZ_JHDH01000083.1 Protein Homology CDS 20074 22056 . + 0 ID=cds-WP_032222917.1;Parent=gene-AB11_RS02385;Dbxref=GenBank:WP_032222917.1;Name=WP_032222917.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AB11_RS02385;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_032222917.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 22214 23494 . - . ID=gene-AB11_RS02390;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AB11_RS02390;old_locus_tag=AB11_0146 NZ_JHDH01000083.1 Protein Homology CDS 22214 23494 . - 0 ID=cds-WP_000045305.1;Parent=gene-AB11_RS02390;Dbxref=GenBank:WP_000045305.1;Name=WP_000045305.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AB11_RS02390;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045305.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 23660 23707 . + . ID=gene-AB11_RS25275;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AB11_RS25275 NZ_JHDH01000083.1 Protein Homology CDS 23660 23707 . + 0 ID=cds-WP_211180485.1;Parent=gene-AB11_RS25275;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AB11_RS25275;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 23719 25140 . + . ID=gene-AB11_RS02395;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AB11_RS02395;old_locus_tag=AB11_0147 NZ_JHDH01000083.1 Protein Homology CDS 23719 25140 . + 0 ID=cds-WP_000845394.1;Parent=gene-AB11_RS02395;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AB11_RS02395;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 25164 25229 . + . ID=gene-AB11_RS02400;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AB11_RS02400 NZ_JHDH01000083.1 Protein Homology CDS 25164 25229 . + 0 ID=cds-WP_120795373.1;Parent=gene-AB11_RS02400;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AB11_RS02400;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 25222 25566 . + . ID=gene-AB11_RS02405;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AB11_RS02405;old_locus_tag=AB11_0148 NZ_JHDH01000083.1 Protein Homology CDS 25222 25566 . + 0 ID=cds-WP_001295564.1;Parent=gene-AB11_RS02405;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AB11_RS02405;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 25613 26236 . - . ID=gene-AB11_RS02410;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AB11_RS02410;old_locus_tag=AB11_0149 NZ_JHDH01000083.1 Protein Homology CDS 25613 26236 . - 0 ID=cds-WP_000964221.1;Parent=gene-AB11_RS02410;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AB11_RS02410;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 26274 27074 . - . ID=gene-AB11_RS02415;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AB11_RS02415;old_locus_tag=AB11_0150 NZ_JHDH01000083.1 Protein Homology CDS 26274 27074 . - 0 ID=cds-WP_001129927.1;Parent=gene-AB11_RS02415;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AB11_RS02415;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 27067 27765 . - . ID=gene-AB11_RS02420;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AB11_RS02420;old_locus_tag=AB11_0151 NZ_JHDH01000083.1 Protein Homology CDS 27067 27765 . - 0 ID=cds-WP_000689844.1;Parent=gene-AB11_RS02420;Dbxref=GenBank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AB11_RS02420;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 27849 29366 . + . ID=gene-AB11_RS02425;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AB11_RS02425;old_locus_tag=AB11_0152 NZ_JHDH01000083.1 Protein Homology CDS 27849 29366 . + 0 ID=cds-WP_021570606.1;Parent=gene-AB11_RS02425;Dbxref=GenBank:WP_021570606.1;Name=WP_021570606.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AB11_RS02425;product=dGTPase;protein_id=WP_021570606.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 29496 30920 . + . ID=gene-AB11_RS02430;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AB11_RS02430;old_locus_tag=AB11_0153 NZ_JHDH01000083.1 Protein Homology CDS 29496 30920 . + 0 ID=cds-WP_000753946.1;Parent=gene-AB11_RS02430;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AB11_RS02430;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 31075 32232 . + . ID=gene-AB11_RS02435;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AB11_RS02435;old_locus_tag=AB11_0154 NZ_JHDH01000083.1 Protein Homology CDS 31075 32232 . + 0 ID=cds-WP_000929443.1;Parent=gene-AB11_RS02435;Dbxref=GenBank:WP_000929443.1;Name=WP_000929443.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414704.4;locus_tag=AB11_RS02435;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929443.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 32321 32707 . - . ID=gene-AB11_RS02440;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AB11_RS02440;old_locus_tag=AB11_0155 NZ_JHDH01000083.1 Protein Homology CDS 32321 32707 . - 0 ID=cds-WP_000272188.1;Parent=gene-AB11_RS02440;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AB11_RS02440;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 32869 33681 . - . ID=gene-AB11_RS02445;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AB11_RS02445;old_locus_tag=AB11_0156 NZ_JHDH01000083.1 Protein Homology CDS 32869 33681 . - 0 ID=cds-WP_000625631.1;Parent=gene-AB11_RS02445;Dbxref=GenBank:WP_000625631.1;Name=WP_000625631.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AB11_RS02445;product=phosphodiesterase YaeI;protein_id=WP_000625631.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 33735 34559 . - . ID=gene-AB11_RS02450;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AB11_RS02450;old_locus_tag=AB11_0157 NZ_JHDH01000083.1 Protein Homology CDS 33735 34559 . - 0 ID=cds-WP_001186650.1;Parent=gene-AB11_RS02450;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AB11_RS02450;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 34590 37262 . - . ID=gene-AB11_RS02455;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AB11_RS02455;old_locus_tag=AB11_0158 NZ_JHDH01000083.1 Protein Homology CDS 34590 37262 . - 0 ID=cds-WP_001094586.1;Parent=gene-AB11_RS02455;Dbxref=GenBank:WP_001094586.1;Name=WP_001094586.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414709.1;locus_tag=AB11_RS02455;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094586.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 37324 38118 . - . ID=gene-AB11_RS02460;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AB11_RS02460;old_locus_tag=AB11_0159 NZ_JHDH01000083.1 Protein Homology CDS 37324 38118 . - 0 ID=cds-WP_001018194.1;Parent=gene-AB11_RS02460;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AB11_RS02460;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 38486 39211 . + . ID=gene-AB11_RS02465;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AB11_RS02465;old_locus_tag=AB11_0160 NZ_JHDH01000083.1 Protein Homology CDS 38486 39211 . + 0 ID=cds-WP_000246882.1;Parent=gene-AB11_RS02465;Dbxref=GenBank:WP_000246882.1;Name=WP_000246882.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AB11_RS02465;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 39469 40320 . + . ID=gene-AB11_RS02470;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AB11_RS02470;old_locus_tag=AB11_0162 NZ_JHDH01000083.1 Protein Homology CDS 39469 40320 . + 0 ID=cds-WP_000818114.1;Parent=gene-AB11_RS02470;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AB11_RS02470;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 40467 41192 . + . ID=gene-AB11_RS02475;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AB11_RS02475;old_locus_tag=AB11_0163 NZ_JHDH01000083.1 Protein Homology CDS 40467 41192 . + 0 ID=cds-WP_000224573.1;Parent=gene-AB11_RS02475;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AB11_RS02475;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 41484 42041 . + . ID=gene-AB11_RS02480;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AB11_RS02480;old_locus_tag=AB11_0164 NZ_JHDH01000083.1 Protein Homology CDS 41484 42041 . + 0 ID=cds-WP_000622418.1;Parent=gene-AB11_RS02480;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AB11_RS02480;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 42133 43329 . + . ID=gene-AB11_RS02485;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AB11_RS02485;old_locus_tag=AB11_0165 NZ_JHDH01000083.1 Protein Homology CDS 42133 43329 . + 0 ID=cds-WP_000811923.1;Parent=gene-AB11_RS02485;Dbxref=GenBank:WP_000811923.1;Name=WP_000811923.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AB11_RS02485;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 43518 44276 . + . ID=gene-AB11_RS02490;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AB11_RS02490;old_locus_tag=AB11_0166 NZ_JHDH01000083.1 Protein Homology CDS 43518 44276 . + 0 ID=cds-WP_001295562.1;Parent=gene-AB11_RS02490;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AB11_RS02490;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 44289 45146 . + . ID=gene-AB11_RS02495;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AB11_RS02495;old_locus_tag=AB11_0168 NZ_JHDH01000083.1 Protein Homology CDS 44289 45146 . + 0 ID=cds-WP_000922446.1;Parent=gene-AB11_RS02495;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AB11_RS02495;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 45158 46510 . + . ID=gene-AB11_RS02500;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AB11_RS02500;old_locus_tag=AB11_0169 NZ_JHDH01000083.1 Protein Homology CDS 45158 46510 . + 0 ID=cds-WP_001295561.1;Parent=gene-AB11_RS02500;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AB11_RS02500;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 46540 48972 . + . ID=gene-AB11_RS02505;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AB11_RS02505;old_locus_tag=AB11_0170 NZ_JHDH01000083.1 Protein Homology CDS 46540 48972 . + 0 ID=cds-WP_001240896.1;Parent=gene-AB11_RS02505;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AB11_RS02505;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 49094 49579 . + . ID=gene-AB11_RS02510;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AB11_RS02510;old_locus_tag=AB11_0171 NZ_JHDH01000083.1 Protein Homology CDS 49094 49579 . + 0 ID=cds-WP_000758956.1;Parent=gene-AB11_RS02510;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AB11_RS02510;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 49583 50608 . + . ID=gene-AB11_RS02515;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AB11_RS02515;old_locus_tag=AB11_0172 NZ_JHDH01000083.1 Protein Homology CDS 49583 50608 . + 0 ID=cds-WP_001139282.1;Parent=gene-AB11_RS02515;Dbxref=GenBank:WP_001139282.1;Name=WP_001139282.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AB11_RS02515;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139282.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 50713 51168 . + . ID=gene-AB11_RS02520;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AB11_RS02520;old_locus_tag=AB11_0173 NZ_JHDH01000083.1 Protein Homology CDS 50713 51168 . + 0 ID=cds-WP_000210739.1;Parent=gene-AB11_RS02520;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AB11_RS02520;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 51172 51960 . + . ID=gene-AB11_RS02525;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AB11_RS02525;old_locus_tag=AB11_0174 NZ_JHDH01000083.1 Protein Homology CDS 51172 51960 . + 0 ID=cds-WP_000565966.1;Parent=gene-AB11_RS02525;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AB11_RS02525;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 51960 53108 . + . ID=gene-AB11_RS02530;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AB11_RS02530;old_locus_tag=AB11_0175 NZ_JHDH01000083.1 Protein Homology CDS 51960 53108 . + 0 ID=cds-WP_000139654.1;Parent=gene-AB11_RS02530;Dbxref=GenBank:WP_000139654.1;Name=WP_000139654.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AB11_RS02530;product=lipid-A-disaccharide synthase;protein_id=WP_000139654.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 53105 53701 . + . ID=gene-AB11_RS02535;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AB11_RS02535;old_locus_tag=AB11_0176 NZ_JHDH01000083.1 Protein Homology CDS 53105 53701 . + 0 ID=cds-WP_000569430.1;Parent=gene-AB11_RS02535;Dbxref=GenBank:WP_000569430.1;Name=WP_000569430.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=AB11_RS02535;product=ribonuclease HII;protein_id=WP_000569430.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 53738 57220 . + . ID=gene-AB11_RS02540;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AB11_RS02540;old_locus_tag=AB11_0177 NZ_JHDH01000083.1 Protein Homology CDS 53738 57220 . + 0 ID=cds-WP_001294757.1;Parent=gene-AB11_RS02540;Dbxref=GenBank:WP_001294757.1;Name=WP_001294757.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AB11_RS02540;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 57233 58192 . + . ID=gene-AB11_RS02545;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AB11_RS02545;old_locus_tag=AB11_0178 NZ_JHDH01000083.1 Protein Homology CDS 57233 58192 . + 0 ID=cds-WP_000055741.1;Parent=gene-AB11_RS02545;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AB11_RS02545;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 58291 60432 . + . ID=gene-AB11_RS02550;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AB11_RS02550;old_locus_tag=AB11_0179 NZ_JHDH01000083.1 Protein Homology CDS 58291 60432 . + 0 ID=cds-WP_001020973.1;Parent=gene-AB11_RS02550;Dbxref=GenBank:WP_001020973.1;Name=WP_001020973.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AB11_RS02550;product=lysine decarboxylase LdcC;protein_id=WP_001020973.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 60489 60878 . + . ID=gene-AB11_RS02555;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AB11_RS02555;old_locus_tag=AB11_0180 NZ_JHDH01000083.1 Protein Homology CDS 60489 60878 . + 0 ID=cds-WP_000901099.1;Parent=gene-AB11_RS02555;Dbxref=GenBank:WP_000901099.1;Name=WP_000901099.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414729.4;locus_tag=AB11_RS02555;product=VOC family protein;protein_id=WP_000901099.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 60943 62241 . + . ID=gene-AB11_RS02560;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AB11_RS02560;old_locus_tag=AB11_0181 NZ_JHDH01000083.1 Protein Homology CDS 60943 62241 . + 0 ID=cds-WP_001652754.1;Parent=gene-AB11_RS02560;Dbxref=GenBank:WP_001652754.1;Name=WP_001652754.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414730.1;locus_tag=AB11_RS02560;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_001652754.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 62290 62550 . - . ID=gene-AB11_RS02565;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AB11_RS02565;old_locus_tag=AB11_0182 NZ_JHDH01000083.1 Protein Homology CDS 62290 62550 . - 0 ID=cds-WP_000062312.1;Parent=gene-AB11_RS02565;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AB11_RS02565;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 62537 62737 . - . ID=gene-AB11_RS02570;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AB11_RS02570;old_locus_tag=AB11_0183 NZ_JHDH01000083.1 Protein Homology CDS 62537 62737 . - 0 ID=cds-WP_000417058.1;Parent=gene-AB11_RS02570;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AB11_RS02570;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 62903 63448 . + . ID=gene-AB11_RS02575;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AB11_RS02575;old_locus_tag=AB11_0184 NZ_JHDH01000083.1 Protein Homology CDS 62903 63448 . + 0 ID=cds-WP_001185290.1;Parent=gene-AB11_RS02575;Dbxref=GenBank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AB11_RS02575;product=YaeQ family protein;protein_id=WP_001185290.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 63445 63867 . + . ID=gene-AB11_RS02580;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AB11_RS02580;old_locus_tag=AB11_0185 NZ_JHDH01000083.1 Protein Homology CDS 63445 63867 . + 0 ID=cds-WP_000635537.1;Parent=gene-AB11_RS02580;Dbxref=GenBank:WP_000635537.1;Name=WP_000635537.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414733.1;locus_tag=AB11_RS02580;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635537.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 63881 64591 . + . ID=gene-AB11_RS02585;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AB11_RS02585;old_locus_tag=AB11_0186 NZ_JHDH01000083.1 Protein Homology CDS 63881 64591 . + 0 ID=cds-WP_000239163.1;Parent=gene-AB11_RS02585;Dbxref=GenBank:WP_000239163.1;Name=WP_000239163.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414734.1;locus_tag=AB11_RS02585;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239163.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 64791 65615 . - . ID=gene-AB11_RS02590;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AB11_RS02590;old_locus_tag=AB11_0187 NZ_JHDH01000083.1 Protein Homology CDS 64791 65615 . - 0 ID=cds-WP_001469748.1;Parent=gene-AB11_RS02590;Dbxref=GenBank:WP_001469748.1;Name=WP_001469748.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308222.1;locus_tag=AB11_RS02590;product=YaeF family permuted papain-like enzyme;protein_id=WP_001469748.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 65668 67386 . - . ID=gene-AB11_RS02595;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AB11_RS02595;old_locus_tag=AB11_0188 NZ_JHDH01000083.1 Protein Homology CDS 65668 67386 . - 0 ID=cds-WP_001260707.1;Parent=gene-AB11_RS02595;Dbxref=GenBank:WP_001260707.1;Name=WP_001260707.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AB11_RS02595;product=proline--tRNA ligase;protein_id=WP_001260707.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 67497 68204 . - . ID=gene-AB11_RS02600;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AB11_RS02600;old_locus_tag=AB11_0189 NZ_JHDH01000083.1 Protein Homology CDS 67497 68204 . - 0 ID=cds-WP_000094011.1;Parent=gene-AB11_RS02600;Dbxref=GenBank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AB11_RS02600;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 68201 68605 . - . ID=gene-AB11_RS02605;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AB11_RS02605;old_locus_tag=AB11_0190 NZ_JHDH01000083.1 Protein Homology CDS 68201 68605 . - 0 ID=cds-WP_001202329.1;Parent=gene-AB11_RS02605;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AB11_RS02605;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 68723 69538 . - . ID=gene-AB11_RS02610;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AB11_RS02610;old_locus_tag=AB11_0191 NZ_JHDH01000083.1 Protein Homology CDS 68723 69538 . - 0 ID=cds-WP_000874226.1;Parent=gene-AB11_RS02610;Dbxref=GenBank:WP_000874226.1;Name=WP_000874226.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414739.1;locus_tag=AB11_RS02610;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874226.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 69578 70231 . - . ID=gene-AB11_RS02615;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AB11_RS02615;old_locus_tag=AB11_0192 NZ_JHDH01000083.1 Protein Homology CDS 69578 70231 . - 0 ID=cds-WP_001294600.1;Parent=gene-AB11_RS02615;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AB11_RS02615;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 70224 71255 . - . ID=gene-AB11_RS02620;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AB11_RS02620;old_locus_tag=AB11_0193 NZ_JHDH01000083.1 Protein Homology CDS 70224 71255 . - 0 ID=cds-WP_000593994.1;Parent=gene-AB11_RS02620;Dbxref=GenBank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AB11_RS02620;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 71443 72015 . + . ID=gene-AB11_RS02625;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AB11_RS02625;old_locus_tag=AB11_0194 NZ_JHDH01000083.1 Protein Homology CDS 71443 72015 . + 0 ID=cds-WP_001140174.1;Parent=gene-AB11_RS02625;Dbxref=GenBank:WP_001140174.1;Name=WP_001140174.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608862.1;locus_tag=AB11_RS02625;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140174.1;transl_table=11 NZ_JHDH01000083.1 RefSeq gene 72379 73688 . + . ID=gene-AB11_RS02630;Name=AB11_RS02630;end_range=73688,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS02630;old_locus_tag=AB11_0195;partial=true NZ_JHDH01000083.1 cmsearch rRNA 72379 73688 . + . ID=rna-AB11_RS02630;Parent=gene-AB11_RS02630;Dbxref=RFAM:RF00177;end_range=73688,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02630;partial=true;product=16S ribosomal RNA NZ_JHDH01000083.1 cmsearch exon 72379 73688 . + . ID=exon-AB11_RS02630-1;Parent=rna-AB11_RS02630;Dbxref=RFAM:RF00177;end_range=73688,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02630;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000084.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000084.1 RefSeq region 1 390 . + . ID=NZ_JHDH01000084.1:1..390;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000084.1 RefSeq gene 88 163 . + . ID=gene-AB11_RS02635;Name=AB11_RS02635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS02635;old_locus_tag=AB11_0196 NZ_JHDH01000084.1 tRNAscan-SE tRNA 88 163 . + . ID=rna-AB11_RS02635;Parent=gene-AB11_RS02635;anticodon=(pos:121..123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02635;product=tRNA-Ala NZ_JHDH01000084.1 tRNAscan-SE exon 88 163 . + . ID=exon-AB11_RS02635-1;Parent=rna-AB11_RS02635;anticodon=(pos:121..123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02635;product=tRNA-Ala ##sequence-region NZ_JHDH01000085.1 1 22068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000085.1 RefSeq region 1 22068 . + . ID=NZ_JHDH01000085.1:1..22068;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000085.1 RefSeq gene 17 2919 . + . ID=gene-AB11_RS02645;Name=AB11_RS02645;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS02645;old_locus_tag=AB11_0197 NZ_JHDH01000085.1 cmsearch rRNA 17 2919 . + . ID=rna-AB11_RS02645;Parent=gene-AB11_RS02645;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02645;product=23S ribosomal RNA NZ_JHDH01000085.1 cmsearch exon 17 2919 . + . ID=exon-AB11_RS02645-1;Parent=rna-AB11_RS02645;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02645;product=23S ribosomal RNA NZ_JHDH01000085.1 RefSeq gene 3108 3223 . + . ID=gene-AB11_RS02650;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS02650;old_locus_tag=AB11_0199 NZ_JHDH01000085.1 cmsearch rRNA 3108 3223 . + . ID=rna-AB11_RS02650;Parent=gene-AB11_RS02650;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02650;product=5S ribosomal RNA NZ_JHDH01000085.1 cmsearch exon 3108 3223 . + . ID=exon-AB11_RS02650-1;Parent=rna-AB11_RS02650;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS02650;product=5S ribosomal RNA NZ_JHDH01000085.1 RefSeq gene 3278 3354 . + . ID=gene-AB11_RS02655;Name=AB11_RS02655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS02655;old_locus_tag=AB11_0200 NZ_JHDH01000085.1 tRNAscan-SE tRNA 3278 3354 . + . ID=rna-AB11_RS02655;Parent=gene-AB11_RS02655;anticodon=(pos:3312..3314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02655;product=tRNA-Asp NZ_JHDH01000085.1 tRNAscan-SE exon 3278 3354 . + . ID=exon-AB11_RS02655-1;Parent=rna-AB11_RS02655;anticodon=(pos:3312..3314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02655;product=tRNA-Asp NZ_JHDH01000085.1 RefSeq gene 3517 4320 . + . ID=gene-AB11_RS02660;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AB11_RS02660;old_locus_tag=AB11_0201 NZ_JHDH01000085.1 Protein Homology CDS 3517 4320 . + 0 ID=cds-WP_000997050.1;Parent=gene-AB11_RS02660;Dbxref=GenBank:WP_000997050.1;Name=WP_000997050.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308230.1;locus_tag=AB11_RS02660;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997050.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 4317 5231 . - . ID=gene-AB11_RS02665;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AB11_RS02665;old_locus_tag=AB11_0202 NZ_JHDH01000085.1 Protein Homology CDS 4317 5231 . - 0 ID=cds-WP_000648577.1;Parent=gene-AB11_RS02665;Dbxref=GenBank:WP_000648577.1;Name=WP_000648577.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308231.1;locus_tag=AB11_RS02665;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648577.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 5472 6272 . + . ID=gene-AB11_RS02670;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AB11_RS02670;old_locus_tag=AB11_0203 NZ_JHDH01000085.1 Protein Homology CDS 5472 6272 . + 0 ID=cds-WP_001230983.1;Parent=gene-AB11_RS02670;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AB11_RS02670;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 6276 6899 . + . ID=gene-AB11_RS02675;Name=yafE;gbkey=Gene;gene=yafE;gene_biotype=protein_coding;locus_tag=AB11_RS02675;old_locus_tag=AB11_0204 NZ_JHDH01000085.1 Protein Homology CDS 6276 6899 . + 0 ID=cds-WP_000016012.1;Parent=gene-AB11_RS02675;Dbxref=GenBank:WP_000016012.1;Name=WP_000016012.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;gene=yafE;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=AB11_RS02675;product=class I SAM-dependent methyltransferase;protein_id=WP_000016012.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 6947 8305 . - . ID=gene-AB11_RS02680;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AB11_RS02680;old_locus_tag=AB11_0205 NZ_JHDH01000085.1 Protein Homology CDS 6947 8305 . - 0 ID=cds-WP_000644685.1;Parent=gene-AB11_RS02680;Dbxref=GenBank:WP_000644685.1;Name=WP_000644685.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AB11_RS02680;product=murein transglycosylase D;protein_id=WP_000644685.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 8377 9132 . - . ID=gene-AB11_RS02685;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AB11_RS02685;old_locus_tag=AB11_0206 NZ_JHDH01000085.1 Protein Homology CDS 8377 9132 . - 0 ID=cds-WP_001052717.1;Parent=gene-AB11_RS02685;Dbxref=GenBank:WP_001052717.1;Name=WP_001052717.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AB11_RS02685;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052717.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 9166 9888 . + . ID=gene-AB11_RS02690;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AB11_RS02690;old_locus_tag=AB11_0207 NZ_JHDH01000085.1 Protein Homology CDS 9166 9888 . + 0 ID=cds-WP_001297210.1;Parent=gene-AB11_RS02690;Dbxref=GenBank:WP_001297210.1;Name=WP_001297210.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308236.2;locus_tag=AB11_RS02690;product=class I SAM-dependent methyltransferase;protein_id=WP_001297210.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 9885 10352 . - . ID=gene-AB11_RS02695;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AB11_RS02695;old_locus_tag=AB11_0208 NZ_JHDH01000085.1 Protein Homology CDS 9885 10352 . - 0 ID=cds-WP_000917883.1;Parent=gene-AB11_RS02695;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AB11_RS02695;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 10417 11148 . + . ID=gene-AB11_RS02700;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AB11_RS02700;old_locus_tag=AB11_0209 NZ_JHDH01000085.1 Protein Homology CDS 10417 11148 . + 0 ID=cds-WP_001300756.1;Parent=gene-AB11_RS02700;Dbxref=GenBank:WP_001300756.1;Name=WP_001300756.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AB11_RS02700;product=DNA polymerase III subunit epsilon;protein_id=WP_001300756.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 11281 11357 . + . ID=gene-AB11_RS02705;Name=AB11_RS02705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS02705;old_locus_tag=AB11_0210 NZ_JHDH01000085.1 tRNAscan-SE tRNA 11281 11357 . + . ID=rna-AB11_RS02705;Parent=gene-AB11_RS02705;anticodon=(pos:11315..11317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02705;product=tRNA-Asp NZ_JHDH01000085.1 tRNAscan-SE exon 11281 11357 . + . ID=exon-AB11_RS02705-1;Parent=rna-AB11_RS02705;anticodon=(pos:11315..11317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS02705;product=tRNA-Asp NZ_JHDH01000085.1 RefSeq gene 11687 12472 . + . ID=gene-AB11_RS02710;Name=AB11_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02710;old_locus_tag=AB11_0211 NZ_JHDH01000085.1 Protein Homology CDS 11687 12472 . + 0 ID=cds-WP_001053628.1;Parent=gene-AB11_RS02710;Dbxref=GenBank:WP_001053628.1;Name=WP_001053628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414752.1;locus_tag=AB11_RS02710;product=hypothetical protein;protein_id=WP_001053628.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 12609 13088 . - . ID=gene-AB11_RS02715;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;locus_tag=AB11_RS02715 NZ_JHDH01000085.1 Protein Homology CDS 12609 13088 . - 0 ID=cds-WP_016241900.1;Parent=gene-AB11_RS02715;Dbxref=GenBank:WP_016241900.1;Name=WP_016241900.1;gbkey=CDS;gene=ykfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165307.1;locus_tag=AB11_RS02715;product=protein YkfM;protein_id=WP_016241900.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 13098 14012 . - . ID=gene-AB11_RS02720;Name=AB11_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02720;old_locus_tag=AB11_0212 NZ_JHDH01000085.1 Protein Homology CDS 13098 14012 . - 0 ID=cds-WP_000908057.1;Parent=gene-AB11_RS02720;Dbxref=GenBank:WP_000908057.1;Name=WP_000908057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908053.1;locus_tag=AB11_RS02720;product=hypothetical protein;protein_id=WP_000908057.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 14056 14538 . - . ID=gene-AB11_RS02725;Name=AB11_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02725;old_locus_tag=AB11_0213 NZ_JHDH01000085.1 Protein Homology CDS 14056 14538 . - 0 ID=cds-WP_001284199.1;Parent=gene-AB11_RS02725;Dbxref=GenBank:WP_001284199.1;Name=WP_001284199.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284197.1;locus_tag=AB11_RS02725;product=Hcp family type VI secretion system effector;protein_id=WP_001284199.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 14562 15914 . - . ID=gene-AB11_RS02730;Name=AB11_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02730;old_locus_tag=AB11_0214 NZ_JHDH01000085.1 Protein Homology CDS 14562 15914 . - 0 ID=cds-WP_032222929.1;Parent=gene-AB11_RS02730;Dbxref=GenBank:WP_032222929.1;Name=WP_032222929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087757.1;locus_tag=AB11_RS02730;product=VasL domain-containing protein;protein_id=WP_032222929.1;transl_table=11 NZ_JHDH01000085.1 RefSeq pseudogene 15925 17229 . - . ID=gene-AB11_RS02735;Name=AB11_RS02735;end_range=17229,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02735;old_locus_tag=AB11_0215;partial=true;pseudo=true NZ_JHDH01000085.1 Protein Homology CDS 15925 17229 . - 0 ID=cds-AB11_RS02735;Parent=gene-AB11_RS02735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308245.2;locus_tag=AB11_RS02735;partial=true;product=type VI secretion IcmF C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000085.1 RefSeq pseudogene 17231 20563 . + . ID=gene-AB11_RS02740;Name=AB11_RS02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02740;old_locus_tag=AB11_0216;partial=true;pseudo=true;start_range=.,17231 NZ_JHDH01000085.1 Protein Homology CDS 17231 20563 . + 0 ID=cds-AB11_RS02740;Parent=gene-AB11_RS02740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763881.1;locus_tag=AB11_RS02740;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,17231;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 20541 20933 . + . ID=gene-AB11_RS02745;Name=AB11_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02745 NZ_JHDH01000085.1 Protein Homology CDS 20541 20933 . + 0 ID=cds-WP_032222931.1;Parent=gene-AB11_RS02745;Dbxref=GenBank:WP_032222931.1;Name=WP_032222931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101839.1;locus_tag=AB11_RS02745;product=hypothetical protein;protein_id=WP_032222931.1;transl_table=11 NZ_JHDH01000085.1 RefSeq gene 21364 22068 . + . ID=gene-AB11_RS02750;Name=AB11_RS02750;end_range=22068,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02750;old_locus_tag=AB11_0218;partial=true NZ_JHDH01000085.1 Protein Homology CDS 21364 22068 . + 0 ID=cds-WP_032222933.1;Parent=gene-AB11_RS02750;Dbxref=GenBank:WP_032222933.1;Name=WP_032222933.1;Ontology_term=GO:0004803;end_range=22068,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AB11_RS02750;partial=true;product=ISAs1 family transposase;protein_id=WP_032222933.1;transl_table=11 ##sequence-region NZ_JHDH01000086.1 1 60614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000086.1 RefSeq region 1 60614 . + . ID=NZ_JHDH01000086.1:1..60614;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000086.1 RefSeq pseudogene 7 243 . + . ID=gene-AB11_RS02755;Name=AB11_RS02755;end_range=243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02755;old_locus_tag=AB11_0219;partial=true;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 7 243 . + 0 ID=cds-AB11_RS02755;Parent=gene-AB11_RS02755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS02755;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000086.1 RefSeq pseudogene 387 1523 . + . ID=gene-AB11_RS02760;Name=AB11_RS02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS02760;old_locus_tag=AB11_0220;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 387 1523 . + 0 ID=cds-AB11_RS02760;Parent=gene-AB11_RS02760;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS02760;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 1564 2334 . - . ID=gene-AB11_RS02765;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AB11_RS02765;old_locus_tag=AB11_0221 NZ_JHDH01000086.1 Protein Homology CDS 1564 2334 . - 0 ID=cds-WP_001118036.1;Parent=gene-AB11_RS02765;Dbxref=GenBank:WP_001118036.1;Name=WP_001118036.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414754.1;locus_tag=AB11_RS02765;product=2-oxoglutaramate amidase;protein_id=WP_001118036.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 2515 2961 . + . ID=gene-AB11_RS02770;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AB11_RS02770;old_locus_tag=AB11_0222 NZ_JHDH01000086.1 Protein Homology CDS 2515 2961 . + 0 ID=cds-WP_001308392.1;Parent=gene-AB11_RS02770;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AB11_RS02770;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 3004 5448 . - . ID=gene-AB11_RS02775;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AB11_RS02775;old_locus_tag=AB11_0223 NZ_JHDH01000086.1 Protein Homology CDS 3004 5448 . - 0 ID=cds-WP_000973083.1;Parent=gene-AB11_RS02775;Dbxref=GenBank:WP_000973083.1;Name=WP_000973083.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AB11_RS02775;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973083.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 5688 6266 . + . ID=gene-AB11_RS02780;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AB11_RS02780;old_locus_tag=AB11_0224 NZ_JHDH01000086.1 Protein Homology CDS 5688 6266 . + 0 ID=cds-WP_000284050.1;Parent=gene-AB11_RS02780;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AB11_RS02780;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 6472 7239 . + . ID=gene-AB11_RS02785;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AB11_RS02785;old_locus_tag=AB11_0225 NZ_JHDH01000086.1 Protein Homology CDS 6472 7239 . + 0 ID=cds-WP_000333380.1;Parent=gene-AB11_RS02785;Dbxref=GenBank:WP_000333380.1;Name=WP_000333380.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AB11_RS02785;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 7210 7950 . - . ID=gene-AB11_RS02790;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AB11_RS02790;old_locus_tag=AB11_0226 NZ_JHDH01000086.1 Protein Homology CDS 7210 7950 . - 0 ID=cds-WP_001225679.1;Parent=gene-AB11_RS02790;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AB11_RS02790;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 8106 8384 . - . ID=gene-AB11_RS02795;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AB11_RS02795;old_locus_tag=AB11_0227 NZ_JHDH01000086.1 Protein Homology CDS 8106 8384 . - 0 ID=cds-WP_000615983.1;Parent=gene-AB11_RS02795;Dbxref=GenBank:WP_000615983.1;Name=WP_000615983.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AB11_RS02795;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615983.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 8387 8647 . - . ID=gene-AB11_RS02800;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AB11_RS02800;old_locus_tag=AB11_0228 NZ_JHDH01000086.1 Protein Homology CDS 8387 8647 . - 0 ID=cds-WP_000729703.1;Parent=gene-AB11_RS02800;Dbxref=GenBank:WP_000729703.1;Name=WP_000729703.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414761.1;locus_tag=AB11_RS02800;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729703.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 8857 9606 . + . ID=gene-AB11_RS02805;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AB11_RS02805;old_locus_tag=AB11_0229 NZ_JHDH01000086.1 Protein Homology CDS 8857 9606 . + 0 ID=cds-WP_024192679.1;Parent=gene-AB11_RS02805;Dbxref=GenBank:WP_024192679.1;Name=WP_024192679.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414762.1;locus_tag=AB11_RS02805;product=C40 family peptidase;protein_id=WP_024192679.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 9782 10279 . + . ID=gene-AB11_RS02810;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;gene_synonym=tnpA(REP);locus_tag=AB11_RS02810;old_locus_tag=AB11_0230 NZ_JHDH01000086.1 Protein Homology CDS 9782 10279 . + 0 ID=cds-WP_000006255.1;Parent=gene-AB11_RS02810;Dbxref=GenBank:WP_000006255.1;Name=WP_000006255.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414763.1;locus_tag=AB11_RS02810;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006255.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 10503 12596 . - . ID=gene-AB11_RS02815;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB11_RS02815;old_locus_tag=AB11_0231 NZ_JHDH01000086.1 Protein Homology CDS 10503 12596 . - 0 ID=cds-WP_001140826.1;Parent=gene-AB11_RS02815;Dbxref=GenBank:WP_001140826.1;Name=WP_001140826.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AB11_RS02815;product=flagellar biosynthesis protein FlhA;protein_id=WP_001140826.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 12580 13719 . - . ID=gene-AB11_RS02820;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AB11_RS02820;old_locus_tag=AB11_0232 NZ_JHDH01000086.1 Protein Homology CDS 12580 13719 . - 0 ID=cds-WP_000785661.1;Parent=gene-AB11_RS02820;Dbxref=GenBank:WP_000785661.1;Name=WP_000785661.1;Ontology_term=GO:0009306,GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236920.1;locus_tag=AB11_RS02820;product=flagellar type III secretion system protein FlhB;protein_id=WP_000785661.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 13709 14491 . - . ID=gene-AB11_RS02825;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AB11_RS02825;old_locus_tag=AB11_0233 NZ_JHDH01000086.1 Protein Homology CDS 13709 14491 . - 0 ID=cds-WP_001260503.1;Parent=gene-AB11_RS02825;Dbxref=GenBank:WP_001260503.1;Name=WP_001260503.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260509.1;locus_tag=AB11_RS02825;product=flagellar biosynthetic protein FliR;protein_id=WP_001260503.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 14493 14765 . - . ID=gene-AB11_RS02830;Name=AB11_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02830;old_locus_tag=AB11_0234 NZ_JHDH01000086.1 Protein Homology CDS 14493 14765 . - 0 ID=cds-WP_000958542.1;Parent=gene-AB11_RS02830;Dbxref=GenBank:WP_000958542.1;Name=WP_000958542.1;Ontology_term=GO:0009306,GO:0044780,GO:0005886,GO:0009425;gbkey=CDS;go_component=plasma membrane|0005886||IEA,bacterial-type flagellum basal body|0009425||IEA;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341234.1;locus_tag=AB11_RS02830;product=flagellar biosynthetic protein FliQ;protein_id=WP_000958542.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 14768 15520 . - . ID=gene-AB11_RS02835;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AB11_RS02835;old_locus_tag=AB11_0235 NZ_JHDH01000086.1 Protein Homology CDS 14768 15520 . - 0 ID=cds-WP_000830273.1;Parent=gene-AB11_RS02835;Dbxref=GenBank:WP_000830273.1;Name=WP_000830273.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538309.1;locus_tag=AB11_RS02835;product=flagellar type III secretion system pore protein FliP;protein_id=WP_000830273.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 15517 15888 . - . ID=gene-AB11_RS02840;Name=AB11_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02840;old_locus_tag=AB11_0236 NZ_JHDH01000086.1 Protein Homology CDS 15517 15888 . - 0 ID=cds-WP_000043127.1;Parent=gene-AB11_RS02840;Dbxref=GenBank:WP_000043127.1;Name=WP_000043127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233859.1;locus_tag=AB11_RS02840;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000043127.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 15881 16732 . - . ID=gene-AB11_RS02845;Name=AB11_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02845;old_locus_tag=AB11_0237 NZ_JHDH01000086.1 Protein Homology CDS 15881 16732 . - 0 ID=cds-WP_000922499.1;Parent=gene-AB11_RS02845;Dbxref=GenBank:WP_000922499.1;Name=WP_000922499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922508.1;locus_tag=AB11_RS02845;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000922499.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 17119 18105 . + . ID=gene-AB11_RS02850;Name=AB11_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02850;old_locus_tag=AB11_0238 NZ_JHDH01000086.1 Protein Homology CDS 17119 18105 . + 0 ID=cds-WP_032213806.1;Parent=gene-AB11_RS02850;Dbxref=GenBank:WP_032213806.1;Name=WP_032213806.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292201.1;locus_tag=AB11_RS02850;product=sigma-54 interaction domain-containing protein;protein_id=WP_032213806.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 18120 18461 . + . ID=gene-AB11_RS02855;Name=AB11_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02855;old_locus_tag=AB11_0239 NZ_JHDH01000086.1 Protein Homology CDS 18120 18461 . + 0 ID=cds-WP_000029089.1;Parent=gene-AB11_RS02855;Dbxref=GenBank:WP_000029089.1;Name=WP_000029089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538312.1;locus_tag=AB11_RS02855;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000029089.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 18466 20112 . + . ID=gene-AB11_RS02860;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AB11_RS02860;old_locus_tag=AB11_0240 NZ_JHDH01000086.1 Protein Homology CDS 18466 20112 . + 0 ID=cds-WP_000993693.1;Parent=gene-AB11_RS02860;Dbxref=GenBank:WP_000993693.1;Name=WP_000993693.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001643010.1;locus_tag=AB11_RS02860;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_000993693.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 20090 21100 . + . ID=gene-AB11_RS02865;Name=AB11_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02865;old_locus_tag=AB11_0241 NZ_JHDH01000086.1 Protein Homology CDS 20090 21100 . + 0 ID=cds-WP_001293173.1;Parent=gene-AB11_RS02865;Dbxref=GenBank:WP_001293173.1;Name=WP_001293173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293121.1;locus_tag=AB11_RS02865;product=flagellar motor switch protein FliG;protein_id=WP_001293173.1;transl_table=11 NZ_JHDH01000086.1 RefSeq pseudogene 21104 21803 . + . ID=gene-AB11_RS02870;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=pseudogene;locus_tag=AB11_RS02870;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 21104 21803 . + 0 ID=cds-AB11_RS02870;Parent=gene-AB11_RS02870;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521882.1;locus_tag=AB11_RS02870;product=flagellar assembly protein FliH;pseudo=true;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 21796 23133 . + . ID=gene-AB11_RS02875;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AB11_RS02875;old_locus_tag=AB11_0244 NZ_JHDH01000086.1 Protein Homology CDS 21796 23133 . + 0 ID=cds-WP_001279403.1;Parent=gene-AB11_RS02875;Dbxref=GenBank:WP_001279403.1;Name=WP_001279403.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279390.1;locus_tag=AB11_RS02875;product=flagellar protein export ATPase FliI;protein_id=WP_001279403.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 23136 23570 . + . ID=gene-AB11_RS02880;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AB11_RS02880;old_locus_tag=AB11_0245 NZ_JHDH01000086.1 Protein Homology CDS 23136 23570 . + 0 ID=cds-WP_001248924.1;Parent=gene-AB11_RS02880;Dbxref=GenBank:WP_001248924.1;Name=WP_001248924.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248915.1;locus_tag=AB11_RS02880;product=flagellar export protein FliJ;protein_id=WP_001248924.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 23573 23968 . + . ID=gene-AB11_RS02885;Name=AB11_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02885;old_locus_tag=AB11_0246 NZ_JHDH01000086.1 Protein Homology CDS 23573 23968 . + 0 ID=cds-WP_000859525.1;Parent=gene-AB11_RS02885;Dbxref=GenBank:WP_000859525.1;Name=WP_000859525.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637450.1;locus_tag=AB11_RS02885;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_000859525.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 24086 26530 . - . ID=gene-AB11_RS02890;Name=AB11_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02890;old_locus_tag=AB11_0247 NZ_JHDH01000086.1 Protein Homology CDS 24086 26530 . - 0 ID=cds-WP_001143108.1;Parent=gene-AB11_RS02890;Dbxref=GenBank:WP_001143108.1;Name=WP_001143108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412594.1;locus_tag=AB11_RS02890;product=glycosyltransferase;protein_id=WP_001143108.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 26709 27638 . - . ID=gene-AB11_RS02895;Name=AB11_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02895;old_locus_tag=AB11_0248 NZ_JHDH01000086.1 Protein Homology CDS 26709 27638 . - 0 ID=cds-WP_000008069.1;Parent=gene-AB11_RS02895;Dbxref=GenBank:WP_000008069.1;Name=WP_000008069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008086.1;locus_tag=AB11_RS02895;product=hypothetical protein;protein_id=WP_000008069.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 27765 28193 . - . ID=gene-AB11_RS02900;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AB11_RS02900;old_locus_tag=AB11_0249 NZ_JHDH01000086.1 Protein Homology CDS 27765 28193 . - 0 ID=cds-WP_000027799.1;Parent=gene-AB11_RS02900;Dbxref=GenBank:WP_000027799.1;Name=WP_000027799.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329715.1;locus_tag=AB11_RS02900;product=flagellar protein FlgN;protein_id=WP_000027799.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 28206 28484 . - . ID=gene-AB11_RS02905;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AB11_RS02905;old_locus_tag=AB11_0250 NZ_JHDH01000086.1 Protein Homology CDS 28206 28484 . - 0 ID=cds-WP_000705401.1;Parent=gene-AB11_RS02905;Dbxref=GenBank:WP_000705401.1;Name=WP_000705401.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705216.1;locus_tag=AB11_RS02905;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000705401.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 28565 29302 . - . ID=gene-AB11_RS02910;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AB11_RS02910;old_locus_tag=AB11_0251 NZ_JHDH01000086.1 Protein Homology CDS 28565 29302 . - 0 ID=cds-WP_000009754.1;Parent=gene-AB11_RS02910;Dbxref=GenBank:WP_000009754.1;Name=WP_000009754.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233868.1;locus_tag=AB11_RS02910;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000009754.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 29384 29719 . + . ID=gene-AB11_RS02915;Name=AB11_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02915;old_locus_tag=AB11_0252 NZ_JHDH01000086.1 Protein Homology CDS 29384 29719 . + 0 ID=cds-WP_000512952.1;Parent=gene-AB11_RS02915;Dbxref=GenBank:WP_000512952.1;Name=WP_000512952.1;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838822.1;locus_tag=AB11_RS02915;product=flagellar basal body protein;protein_id=WP_000512952.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 29722 30153 . + . ID=gene-AB11_RS02920;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AB11_RS02920;old_locus_tag=AB11_0253 NZ_JHDH01000086.1 Protein Homology CDS 29722 30153 . + 0 ID=cds-WP_000010949.1;Parent=gene-AB11_RS02920;Dbxref=GenBank:WP_000010949.1;Name=WP_000010949.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010944.1;locus_tag=AB11_RS02920;product=flagellar basal body rod protein FlgC;protein_id=WP_000010949.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 30153 30866 . + . ID=gene-AB11_RS02925;Name=AB11_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02925;old_locus_tag=AB11_0254 NZ_JHDH01000086.1 Protein Homology CDS 30153 30866 . + 0 ID=cds-WP_001093675.1;Parent=gene-AB11_RS02925;Dbxref=GenBank:WP_001093675.1;Name=WP_001093675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508388.1;locus_tag=AB11_RS02925;product=flagellar hook capping FlgD N-terminal domain-containing protein;protein_id=WP_001093675.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 31026 32228 . + . ID=gene-AB11_RS02930;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AB11_RS02930;old_locus_tag=AB11_0255 NZ_JHDH01000086.1 Protein Homology CDS 31026 32228 . + 0 ID=cds-WP_000119513.1;Parent=gene-AB11_RS02930;Dbxref=GenBank:WP_000119513.1;Name=WP_000119513.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904671.1;locus_tag=AB11_RS02930;product=flagellar hook protein FlgE;protein_id=WP_000119513.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 32228 32965 . + . ID=gene-AB11_RS02935;Name=AB11_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02935;old_locus_tag=AB11_0256 NZ_JHDH01000086.1 Protein Homology CDS 32228 32965 . + 0 ID=cds-WP_000375468.1;Parent=gene-AB11_RS02935;Dbxref=GenBank:WP_000375468.1;Name=WP_000375468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=AB11_RS02935;product=flagellar basal body rod protein FlgF;protein_id=WP_000375468.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 33044 33829 . + . ID=gene-AB11_RS02940;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AB11_RS02940;old_locus_tag=AB11_0257 NZ_JHDH01000086.1 Protein Homology CDS 33044 33829 . + 0 ID=cds-WP_000990538.1;Parent=gene-AB11_RS02940;Dbxref=GenBank:WP_000990538.1;Name=WP_000990538.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838810.1;locus_tag=AB11_RS02940;product=flagellar basal-body rod protein FlgG;protein_id=WP_000990538.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 34033 34698 . + . ID=gene-AB11_RS02945;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AB11_RS02945;old_locus_tag=AB11_0258 NZ_JHDH01000086.1 Protein Homology CDS 34033 34698 . + 0 ID=cds-WP_000800868.1;Parent=gene-AB11_RS02945;Dbxref=GenBank:WP_000800868.1;Name=WP_000800868.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211429.1;locus_tag=AB11_RS02945;product=flagellar basal body L-ring protein FlgH;protein_id=WP_000800868.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 34713 35813 . + . ID=gene-AB11_RS02950;Name=AB11_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02950;old_locus_tag=AB11_0259 NZ_JHDH01000086.1 Protein Homology CDS 34713 35813 . + 0 ID=cds-WP_001181895.1;Parent=gene-AB11_RS02950;Dbxref=GenBank:WP_001181895.1;Name=WP_001181895.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181884.1;locus_tag=AB11_RS02950;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001181895.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 35813 36112 . + . ID=gene-AB11_RS02955;Name=AB11_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02955;old_locus_tag=AB11_0260 NZ_JHDH01000086.1 Protein Homology CDS 35813 36112 . + 0 ID=cds-WP_000700041.1;Parent=gene-AB11_RS02955;Dbxref=GenBank:WP_000700041.1;Name=WP_000700041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=AB11_RS02955;product=rod-binding protein;protein_id=WP_000700041.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 36295 37671 . + . ID=gene-AB11_RS02960;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AB11_RS02960;old_locus_tag=AB11_0261 NZ_JHDH01000086.1 Protein Homology CDS 36295 37671 . + 0 ID=cds-WP_000367226.1;Parent=gene-AB11_RS02960;Dbxref=GenBank:WP_000367226.1;Name=WP_000367226.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=AB11_RS02960;product=flagellar hook-associated protein FlgK;protein_id=WP_000367226.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 37686 38615 . + . ID=gene-AB11_RS02965;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AB11_RS02965;old_locus_tag=AB11_0262 NZ_JHDH01000086.1 Protein Homology CDS 37686 38615 . + 0 ID=cds-WP_001266796.1;Parent=gene-AB11_RS02965;Dbxref=GenBank:WP_001266796.1;Name=WP_001266796.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219239.1;locus_tag=AB11_RS02965;product=flagellar hook-associated protein FlgL;protein_id=WP_001266796.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 38632 39609 . + . ID=gene-AB11_RS02970;Name=AB11_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02970;old_locus_tag=AB11_0263 NZ_JHDH01000086.1 Protein Homology CDS 38632 39609 . + 0 ID=cds-WP_001195945.1;Parent=gene-AB11_RS02970;Dbxref=GenBank:WP_001195945.1;Name=WP_001195945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195949.1;locus_tag=AB11_RS02970;product=hypothetical protein;protein_id=WP_001195945.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 39668 40510 . - . ID=gene-AB11_RS02975;Name=AB11_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02975;old_locus_tag=AB11_0264 NZ_JHDH01000086.1 Protein Homology CDS 39668 40510 . - 0 ID=cds-WP_021570642.1;Parent=gene-AB11_RS02975;Dbxref=GenBank:WP_021570642.1;Name=WP_021570642.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022370.1;locus_tag=AB11_RS02975;product=transcriptional regulator;protein_id=WP_021570642.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 40997 41911 . + . ID=gene-AB11_RS02980;Name=lafA;gbkey=Gene;gene=lafA;gene_biotype=protein_coding;locus_tag=AB11_RS02980;old_locus_tag=AB11_0265 NZ_JHDH01000086.1 Protein Homology CDS 40997 41911 . + 0 ID=cds-WP_000949083.1;Parent=gene-AB11_RS02980;Dbxref=GenBank:WP_000949083.1;Name=WP_000949083.1;gbkey=CDS;gene=lafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570969.1;locus_tag=AB11_RS02980;product=lateral flagellin LafA;protein_id=WP_000949083.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 42163 43479 . + . ID=gene-AB11_RS02985;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AB11_RS02985;old_locus_tag=AB11_0266 NZ_JHDH01000086.1 Protein Homology CDS 42163 43479 . + 0 ID=cds-WP_000609667.1;Parent=gene-AB11_RS02985;Dbxref=GenBank:WP_000609667.1;Name=WP_000609667.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609688.1;locus_tag=AB11_RS02985;product=flagellar filament capping protein FliD;protein_id=WP_000609667.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 43502 43894 . + . ID=gene-AB11_RS02990;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AB11_RS02990;old_locus_tag=AB11_0267 NZ_JHDH01000086.1 Protein Homology CDS 43502 43894 . + 0 ID=cds-WP_000285319.1;Parent=gene-AB11_RS02990;Dbxref=GenBank:WP_000285319.1;Name=WP_000285319.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285320.1;locus_tag=AB11_RS02990;product=flagellar export chaperone FliS;protein_id=WP_000285319.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 43899 44210 . + . ID=gene-AB11_RS02995;Name=AB11_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS02995;old_locus_tag=AB11_0268 NZ_JHDH01000086.1 Protein Homology CDS 43899 44210 . + 0 ID=cds-WP_000414993.1;Parent=gene-AB11_RS02995;Dbxref=GenBank:WP_000414993.1;Name=WP_000414993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414995.1;locus_tag=AB11_RS02995;product=hypothetical protein;protein_id=WP_000414993.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 44207 45268 . + . ID=gene-AB11_RS03000;Name=AB11_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03000;old_locus_tag=AB11_0269 NZ_JHDH01000086.1 Protein Homology CDS 44207 45268 . + 0 ID=cds-WP_021570643.1;Parent=gene-AB11_RS03000;Dbxref=GenBank:WP_021570643.1;Name=WP_021570643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067462.1;locus_tag=AB11_RS03000;product=flagellar hook-length control protein FliK;protein_id=WP_021570643.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 45276 45743 . + . ID=gene-AB11_RS03005;Name=AB11_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03005;old_locus_tag=AB11_0270 NZ_JHDH01000086.1 Protein Homology CDS 45276 45743 . + 0 ID=cds-WP_000725257.1;Parent=gene-AB11_RS03005;Dbxref=GenBank:WP_000725257.1;Name=WP_000725257.1;Ontology_term=GO:0006935,GO:0071978,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521900.1;locus_tag=AB11_RS03005;product=flagellar basal body-associated FliL family protein;protein_id=WP_000725257.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 45763 46479 . + . ID=gene-AB11_RS03010;Name=AB11_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03010;old_locus_tag=AB11_0271 NZ_JHDH01000086.1 Protein Homology CDS 45763 46479 . + 0 ID=cds-WP_000938723.1;Parent=gene-AB11_RS03010;Dbxref=GenBank:WP_000938723.1;Name=WP_000938723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938732.1;locus_tag=AB11_RS03010;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_000938723.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 46492 47355 . + . ID=gene-AB11_RS03015;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AB11_RS03015;old_locus_tag=AB11_0272 NZ_JHDH01000086.1 Protein Homology CDS 46492 47355 . + 0 ID=cds-WP_001169518.1;Parent=gene-AB11_RS03015;Dbxref=GenBank:WP_001169518.1;Name=WP_001169518.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169515.1;locus_tag=AB11_RS03015;product=flagellar motor stator protein MotA;protein_id=WP_001169518.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 47358 48281 . + . ID=gene-AB11_RS03020;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AB11_RS03020;old_locus_tag=AB11_0273 NZ_JHDH01000086.1 Protein Homology CDS 47358 48281 . + 0 ID=cds-WP_001232547.1;Parent=gene-AB11_RS03020;Dbxref=GenBank:WP_001232547.1;Name=WP_001232547.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521902.1;locus_tag=AB11_RS03020;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_001232547.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 48352 49407 . + . ID=gene-AB11_RS03025;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AB11_RS03025;old_locus_tag=AB11_0274 NZ_JHDH01000086.1 Protein Homology CDS 48352 49407 . + 0 ID=cds-WP_001226164.1;Parent=gene-AB11_RS03025;Dbxref=GenBank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AB11_RS03025;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 49459 49752 . + . ID=gene-AB11_RS03030;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AB11_RS03030;old_locus_tag=AB11_0275 NZ_JHDH01000086.1 Protein Homology CDS 49459 49752 . + 0 ID=cds-WP_000554757.1;Parent=gene-AB11_RS03030;Dbxref=GenBank:WP_000554757.1;Name=WP_000554757.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308286.1;locus_tag=AB11_RS03030;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554757.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 49755 50153 . + . ID=gene-AB11_RS03035;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AB11_RS03035;old_locus_tag=AB11_0276 NZ_JHDH01000086.1 Protein Homology CDS 49755 50153 . + 0 ID=cds-WP_001263493.1;Parent=gene-AB11_RS03035;Dbxref=GenBank:WP_001263493.1;Name=WP_001263493.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706233.1;locus_tag=AB11_RS03035;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_001263493.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 50163 50615 . + . ID=gene-AB11_RS03040;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AB11_RS03040;old_locus_tag=AB11_0277 NZ_JHDH01000086.1 Protein Homology CDS 50163 50615 . + 0 ID=cds-WP_001059847.1;Parent=gene-AB11_RS03040;Dbxref=GenBank:WP_001059847.1;Name=WP_001059847.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706234.1;locus_tag=AB11_RS03040;product=GNAT family N-acetyltransferase;protein_id=WP_001059847.1;transl_table=11 NZ_JHDH01000086.1 RefSeq pseudogene 50861 51064 . + . ID=gene-AB11_RS03045;Name=AB11_RS03045;end_range=51064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03045;old_locus_tag=AB11_0278;partial=true;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 50861 51064 . + 0 ID=cds-AB11_RS03045;Parent=gene-AB11_RS03045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=51064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AB11_RS03045;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JHDH01000086.1 RefSeq pseudogene 51078 51584 . + . ID=gene-AB11_RS03050;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=AB11_RS03050;old_locus_tag=AB11_0279;partial=true;pseudo=true;start_range=.,51078 NZ_JHDH01000086.1 Protein Homology CDS 51078 51584 . + 0 ID=cds-AB11_RS03050;Parent=gene-AB11_RS03050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AB11_RS03050;partial=true;product=peptide chain release factor H;pseudo=true;start_range=.,51078;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 51641 53098 . - . ID=gene-AB11_RS03055;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AB11_RS03055;old_locus_tag=AB11_0280 NZ_JHDH01000086.1 Protein Homology CDS 51641 53098 . - 0 ID=cds-WP_001293003.1;Parent=gene-AB11_RS03055;Dbxref=GenBank:WP_001293003.1;Name=WP_001293003.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AB11_RS03055;product=cytosol nonspecific dipeptidase;protein_id=WP_001293003.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 53359 53817 . + . ID=gene-AB11_RS03060;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AB11_RS03060;old_locus_tag=AB11_0281 NZ_JHDH01000086.1 Protein Homology CDS 53359 53817 . + 0 ID=cds-WP_001291990.1;Parent=gene-AB11_RS03060;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AB11_RS03060;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 53909 55153 . + . ID=gene-AB11_RS03065;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AB11_RS03065;old_locus_tag=AB11_0282 NZ_JHDH01000086.1 Protein Homology CDS 53909 55153 . + 0 ID=cds-WP_000189541.1;Parent=gene-AB11_RS03065;Dbxref=GenBank:WP_000189541.1;Name=WP_000189541.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AB11_RS03065;product=esterase FrsA;protein_id=WP_000189541.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 55211 55612 . + . ID=gene-AB11_RS03070;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AB11_RS03070;old_locus_tag=AB11_0283 NZ_JHDH01000086.1 Protein Homology CDS 55211 55612 . + 0 ID=cds-WP_000174677.1;Parent=gene-AB11_RS03070;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AB11_RS03070;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 55651 56706 . - . ID=gene-AB11_RS03075;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AB11_RS03075;old_locus_tag=AB11_0284 NZ_JHDH01000086.1 Protein Homology CDS 55651 56706 . - 0 ID=cds-WP_000749863.1;Parent=gene-AB11_RS03075;Dbxref=GenBank:WP_000749863.1;Name=WP_000749863.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414776.1;locus_tag=AB11_RS03075;product=phosphoporin PhoE;protein_id=WP_000749863.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 56994 58097 . + . ID=gene-AB11_RS03080;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AB11_RS03080;old_locus_tag=AB11_0285 NZ_JHDH01000086.1 Protein Homology CDS 56994 58097 . + 0 ID=cds-WP_001285288.1;Parent=gene-AB11_RS03080;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AB11_RS03080;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 58109 59362 . + . ID=gene-AB11_RS03085;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AB11_RS03085;old_locus_tag=AB11_0286 NZ_JHDH01000086.1 Protein Homology CDS 58109 59362 . + 0 ID=cds-WP_000893278.1;Parent=gene-AB11_RS03085;Dbxref=GenBank:WP_000893278.1;Name=WP_000893278.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AB11_RS03085;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11 NZ_JHDH01000086.1 RefSeq gene 59477 59552 . + . ID=gene-AB11_RS03090;Name=AB11_RS03090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS03090;old_locus_tag=AB11_0287 NZ_JHDH01000086.1 tRNAscan-SE tRNA 59477 59552 . + . ID=rna-AB11_RS03090;Parent=gene-AB11_RS03090;anticodon=(pos:59510..59512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS03090;product=tRNA-Thr NZ_JHDH01000086.1 tRNAscan-SE exon 59477 59552 . + . ID=exon-AB11_RS03090-1;Parent=rna-AB11_RS03090;anticodon=(pos:59510..59512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS03090;product=tRNA-Thr NZ_JHDH01000086.1 RefSeq pseudogene 59567 59962 . - . ID=gene-AB11_RS03095;Name=AB11_RS03095;end_range=59962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03095;partial=true;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 59567 59962 . - 0 ID=cds-AB11_RS03095;Parent=gene-AB11_RS03095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=59962,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011579066.1;locus_tag=AB11_RS03095;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_JHDH01000086.1 RefSeq pseudogene 60020 60614 . + . ID=gene-AB11_RS03100;Name=AB11_RS03100;end_range=60614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03100;old_locus_tag=AB11_0288;partial=true;pseudo=true NZ_JHDH01000086.1 Protein Homology CDS 60020 60614 . + 0 ID=cds-AB11_RS03100;Parent=gene-AB11_RS03100;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=60614,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS03100;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000087.1 1 19184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000087.1 RefSeq region 1 19184 . + . ID=NZ_JHDH01000087.1:1..19184;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000087.1 RefSeq pseudogene 1 751 . + . ID=gene-AB11_RS03105;Name=AB11_RS03105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03105;old_locus_tag=AB11_0289;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000087.1 Protein Homology CDS 1 751 . + 1 ID=cds-AB11_RS03105;Parent=gene-AB11_RS03105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB11_RS03105;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000087.1 RefSeq pseudogene 788 1015 . - . ID=gene-AB11_RS25465;Name=AB11_RS25465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25465;old_locus_tag=AB11_0290;partial=true;pseudo=true;start_range=.,788 NZ_JHDH01000087.1 Protein Homology CDS 788 1015 . - 0 ID=cds-AB11_RS25465;Parent=gene-AB11_RS25465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604127.1;locus_tag=AB11_RS25465;partial=true;product=hypothetical protein;pseudo=true;start_range=.,788;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 1081 2826 . - . ID=gene-AB11_RS03110;Name=AB11_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03110;old_locus_tag=AB11_0291 NZ_JHDH01000087.1 Protein Homology CDS 1081 2826 . - 0 ID=cds-WP_024173799.1;Parent=gene-AB11_RS03110;Dbxref=GenBank:WP_024173799.1;Name=WP_024173799.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529578.1;locus_tag=AB11_RS03110;product=3'-5' exonuclease;protein_id=WP_024173799.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 3004 3618 . - . ID=gene-AB11_RS03115;Name=AB11_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03115;old_locus_tag=AB11_0292 NZ_JHDH01000087.1 Protein Homology CDS 3004 3618 . - 0 ID=cds-WP_257606797.1;Parent=gene-AB11_RS03115;Dbxref=GenBank:WP_257606797.1;Name=WP_257606797.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246294.1;locus_tag=AB11_RS03115;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_257606797.1;transl_table=11 NZ_JHDH01000087.1 RefSeq pseudogene 3752 4121 . - . ID=gene-AB11_RS25980;Name=AB11_RS25980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25980;pseudo=true NZ_JHDH01000087.1 Protein Homology CDS 3752 4121 . - 0 ID=cds-AB11_RS25980;Parent=gene-AB11_RS25980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018099.1;locus_tag=AB11_RS25980;product=type VI secretion system baseplate subunit TssE;pseudo=true;transl_table=11 NZ_JHDH01000087.1 RefSeq pseudogene 4155 4355 . - . ID=gene-AB11_RS03120;Name=AB11_RS03120;end_range=4355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03120;old_locus_tag=AB11_0293;partial=true;pseudo=true;start_range=.,4155 NZ_JHDH01000087.1 Protein Homology CDS 4155 4355 . - 0 ID=cds-AB11_RS03120;Parent=gene-AB11_RS03120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081255.1;locus_tag=AB11_RS03120;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4155;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 4540 4776 . - . ID=gene-AB11_RS03125;Name=AB11_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03125 NZ_JHDH01000087.1 Protein Homology CDS 4540 4776 . - 0 ID=cds-WP_000500956.1;Parent=gene-AB11_RS03125;Dbxref=GenBank:WP_000500956.1;Name=WP_000500956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500955.1;locus_tag=AB11_RS03125;product=hypothetical protein;protein_id=WP_000500956.1;transl_table=11 NZ_JHDH01000087.1 RefSeq pseudogene 4763 6979 . - . ID=gene-AB11_RS25695;Name=AB11_RS25695;end_range=6979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25695;old_locus_tag=AB11_0294;partial=true;pseudo=true NZ_JHDH01000087.1 Protein Homology CDS 4763 6979 . - 0 ID=cds-AB11_RS25695;Parent=gene-AB11_RS25695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081251.1;locus_tag=AB11_RS25695;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000087.1 RefSeq pseudogene 7076 7651 . - . ID=gene-AB11_RS25985;Name=AB11_RS25985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25985;partial=true;pseudo=true;start_range=.,7076 NZ_JHDH01000087.1 Protein Homology CDS 7076 7651 . - 0 ID=cds-AB11_RS25985;Parent=gene-AB11_RS25985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AB11_RS25985;partial=true;product=POTRA domain-containing protein;pseudo=true;start_range=.,7076;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 7755 7883 . - . ID=gene-AB11_RS25700;Name=AB11_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25700;old_locus_tag=AB11_0295 NZ_JHDH01000087.1 Protein Homology CDS 7755 7883 . - 0 ID=cds-WP_001487910.1;Parent=gene-AB11_RS25700;Dbxref=GenBank:WP_001487910.1;Name=WP_001487910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001710488.1;locus_tag=AB11_RS25700;product=hypothetical protein;protein_id=WP_001487910.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 8331 8522 . + . ID=gene-AB11_RS03135;Name=AB11_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03135;old_locus_tag=AB11_0297 NZ_JHDH01000087.1 Protein Homology CDS 8331 8522 . + 0 ID=cds-WP_001487912.1;Parent=gene-AB11_RS03135;Dbxref=GenBank:WP_001487912.1;Name=WP_001487912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502604.1;locus_tag=AB11_RS03135;product=DUF4222 domain-containing protein;protein_id=WP_001487912.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 8575 8808 . - . ID=gene-AB11_RS03140;Name=AB11_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03140;old_locus_tag=AB11_0298 NZ_JHDH01000087.1 Protein Homology CDS 8575 8808 . - 0 ID=cds-WP_000124171.1;Parent=gene-AB11_RS03140;Dbxref=GenBank:WP_000124171.1;Name=WP_000124171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=AB11_RS03140;product=hypothetical protein;protein_id=WP_000124171.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 8904 9527 . - . ID=gene-AB11_RS03145;Name=AB11_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03145;old_locus_tag=AB11_0299 NZ_JHDH01000087.1 Protein Homology CDS 8904 9527 . - 0 ID=cds-WP_032222955.1;Parent=gene-AB11_RS03145;Dbxref=GenBank:WP_032222955.1;Name=WP_032222955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AB11_RS03145;product=hypothetical protein;protein_id=WP_032222955.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 9616 10113 . - . ID=gene-AB11_RS03150;Name=AB11_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03150 NZ_JHDH01000087.1 Protein Homology CDS 9616 10113 . - 0 ID=cds-WP_021552435.1;Parent=gene-AB11_RS03150;Dbxref=GenBank:WP_021552435.1;Name=WP_021552435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AB11_RS03150;product=hypothetical protein;protein_id=WP_021552435.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 10216 10410 . - . ID=gene-AB11_RS25170;Name=AB11_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25170 NZ_JHDH01000087.1 GeneMarkS-2+ CDS 10216 10410 . - 0 ID=cds-WP_001487915.1;Parent=gene-AB11_RS25170;Dbxref=GenBank:WP_001487915.1;Name=WP_001487915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25170;product=hypothetical protein;protein_id=WP_001487915.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 10463 11032 . - . ID=gene-AB11_RS03155;Name=AB11_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03155;old_locus_tag=AB11_0300 NZ_JHDH01000087.1 GeneMarkS-2+ CDS 10463 11032 . - 0 ID=cds-WP_032222959.1;Parent=gene-AB11_RS03155;Dbxref=GenBank:WP_032222959.1;Name=WP_032222959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS03155;product=YagK/YfjJ domain-containing protein;protein_id=WP_032222959.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 11060 11257 . - . ID=gene-AB11_RS03160;Name=AB11_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03160;old_locus_tag=AB11_0301 NZ_JHDH01000087.1 Protein Homology CDS 11060 11257 . - 0 ID=cds-WP_000553837.1;Parent=gene-AB11_RS03160;Dbxref=GenBank:WP_000553837.1;Name=WP_000553837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001305349.1;locus_tag=AB11_RS03160;product=YagK/YfjJ domain-containing protein;protein_id=WP_000553837.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 11506 11931 . - . ID=gene-AB11_RS03165;Name=AB11_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03165 NZ_JHDH01000087.1 Protein Homology CDS 11506 11931 . - 0 ID=cds-WP_001013306.1;Parent=gene-AB11_RS03165;Dbxref=GenBank:WP_001013306.1;Name=WP_001013306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708754.1;locus_tag=AB11_RS03165;product=putative zinc ribbon protein;protein_id=WP_001013306.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 11928 12311 . - . ID=gene-AB11_RS03170;Name=AB11_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03170 NZ_JHDH01000087.1 Protein Homology CDS 11928 12311 . - 0 ID=cds-WP_024173801.1;Parent=gene-AB11_RS03170;Dbxref=GenBank:WP_024173801.1;Name=WP_024173801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708755.1;locus_tag=AB11_RS03170;product=putative zinc ribbon protein;protein_id=WP_024173801.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 12571 13140 . - . ID=gene-AB11_RS03175;Name=AB11_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03175;old_locus_tag=AB11_0304 NZ_JHDH01000087.1 Protein Homology CDS 12571 13140 . - 0 ID=cds-WP_032197778.1;Parent=gene-AB11_RS03175;Dbxref=GenBank:WP_032197778.1;Name=WP_032197778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB11_RS03175;product=inovirus Gp2 family protein;protein_id=WP_032197778.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 13340 13537 . + . ID=gene-AB11_RS03180;Name=AB11_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03180;old_locus_tag=AB11_0305 NZ_JHDH01000087.1 Protein Homology CDS 13340 13537 . + 0 ID=cds-WP_000236754.1;Parent=gene-AB11_RS03180;Dbxref=GenBank:WP_000236754.1;Name=WP_000236754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236757.1;locus_tag=AB11_RS03180;product=hypothetical protein;protein_id=WP_000236754.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 13878 14027 . - . ID=gene-AB11_RS03185;Name=AB11_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03185;old_locus_tag=AB11_0306 NZ_JHDH01000087.1 Protein Homology CDS 13878 14027 . - 0 ID=cds-WP_071528427.1;Parent=gene-AB11_RS03185;Dbxref=GenBank:WP_071528427.1;Name=WP_071528427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453335.1;locus_tag=AB11_RS03185;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_071528427.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 14779 14985 . + . ID=gene-AB11_RS03190;Name=AB11_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03190;old_locus_tag=AB11_0307 NZ_JHDH01000087.1 Protein Homology CDS 14779 14985 . + 0 ID=cds-WP_000632607.1-2;Parent=gene-AB11_RS03190;Dbxref=GenBank:WP_000632607.1;Name=WP_000632607.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AB11_RS03190;product=helix-turn-helix transcriptional regulator;protein_id=WP_000632607.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 15072 15674 . + . ID=gene-AB11_RS03195;Name=AB11_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03195;old_locus_tag=AB11_0308 NZ_JHDH01000087.1 Protein Homology CDS 15072 15674 . + 0 ID=cds-WP_000804452.1-2;Parent=gene-AB11_RS03195;Dbxref=GenBank:WP_000804452.1;Name=WP_000804452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590672.1;locus_tag=AB11_RS03195;product=hypothetical protein;protein_id=WP_000804452.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 15996 17480 . - . ID=gene-AB11_RS03200;Name=AB11_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03200;old_locus_tag=AB11_0309 NZ_JHDH01000087.1 Protein Homology CDS 15996 17480 . - 0 ID=cds-WP_001297234.1-2;Parent=gene-AB11_RS03200;Dbxref=GenBank:WP_001297234.1;Name=WP_001297234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=AB11_RS03200;product=YfjI family protein;protein_id=WP_001297234.1;transl_table=11 NZ_JHDH01000087.1 RefSeq gene 18711 19184 . + . ID=gene-AB11_RS03205;Name=AB11_RS03205;end_range=19184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03205;old_locus_tag=AB11_0312;partial=true NZ_JHDH01000087.1 Protein Homology CDS 18711 19184 . + 0 ID=cds-WP_032222962.1;Parent=gene-AB11_RS03205;Dbxref=GenBank:WP_032222962.1;Name=WP_032222962.1;Ontology_term=GO:0005525;end_range=19184,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB11_RS03205;partial=true;product=YfjP family GTPase;protein_id=WP_032222962.1;transl_table=11 ##sequence-region NZ_JHDH01000088.1 1 23732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000088.1 RefSeq region 1 23732 . + . ID=NZ_JHDH01000088.1:1..23732;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000088.1 RefSeq gene 51 748 . + . ID=gene-AB11_RS03210;Name=AB11_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03210;old_locus_tag=AB11_0313 NZ_JHDH01000088.1 Protein Homology CDS 51 300 . + 0 ID=cds-WP_095033700.1;Parent=gene-AB11_RS03210;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS03210;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000088.1 Protein Homology CDS 300 748 . + 2 ID=cds-WP_095033700.1;Parent=gene-AB11_RS03210;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS03210;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 810 1352 . - . ID=gene-AB11_RS03215;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AB11_RS03215 NZ_JHDH01000088.1 Protein Homology CDS 810 1352 . - 0 ID=cds-WP_001301257.1;Parent=gene-AB11_RS03215;Dbxref=GenBank:WP_001301257.1;Name=WP_001301257.1;Ontology_term=GO:0006355,GO:1902021,GO:0003677;gbkey=CDS;gene=ecpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of bacterial-type flagellum-dependent cell motility|1902021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AB11_RS03215;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001301257.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 2176 2403 . + . ID=gene-AB11_RS03220;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=AB11_RS03220 NZ_JHDH01000088.1 Protein Homology CDS 2176 2403 . + 0 ID=cds-WP_001147279.1;Parent=gene-AB11_RS03220;Dbxref=GenBank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AB11_RS03220;product=protein YkgL;protein_id=WP_001147279.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 2438 2578 . - . ID=gene-AB11_RS03225;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AB11_RS03225;old_locus_tag=AB11_0316 NZ_JHDH01000088.1 Protein Homology CDS 2438 2578 . - 0 ID=cds-WP_000866436.1;Parent=gene-AB11_RS03225;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AB11_RS03225;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 2578 2841 . - . ID=gene-AB11_RS03230;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=AB11_RS03230;old_locus_tag=AB11_0317 NZ_JHDH01000088.1 Protein Homology CDS 2578 2841 . - 0 ID=cds-WP_000803998.1;Parent=gene-AB11_RS03230;Dbxref=GenBank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AB11_RS03230;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 3205 3306 . - . ID=gene-AB11_RS25990;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AB11_RS25990 NZ_JHDH01000088.1 Protein Homology CDS 3205 3306 . - 0 ID=cds-WP_000662258.1;Parent=gene-AB11_RS25990;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AB11_RS25990;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JHDH01000088.1 RefSeq pseudogene 3780 3869 . - . ID=gene-AB11_RS25485;Name=AB11_RS25485;end_range=3869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25485;partial=true;pseudo=true NZ_JHDH01000088.1 Protein Homology CDS 3780 3869 . - 0 ID=cds-AB11_RS25485;Parent=gene-AB11_RS25485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AB11_RS25485;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000088.1 RefSeq pseudogene 4589 7293 . + . ID=gene-AB11_RS03240;Name=AB11_RS03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03240;pseudo=true NZ_JHDH01000088.1 Protein Homology CDS 4589 7293 . + 0 ID=cds-AB11_RS03240;Parent=gene-AB11_RS03240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092554.1;locus_tag=AB11_RS03240;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 7433 8284 . - . ID=gene-AB11_RS03245;Name=AB11_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03245;old_locus_tag=AB11_0323 NZ_JHDH01000088.1 Protein Homology CDS 7433 8284 . - 0 ID=cds-WP_000621009.1;Parent=gene-AB11_RS03245;Dbxref=GenBank:WP_000621009.1;Name=WP_000621009.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AB11_RS03245;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JHDH01000088.1 RefSeq pseudogene 8587 8715 . + . ID=gene-AB11_RS03250;Name=AB11_RS03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03250;partial=true;pseudo=true;start_range=.,8587 NZ_JHDH01000088.1 Protein Homology CDS 8587 8715 . + 0 ID=cds-AB11_RS03250;Parent=gene-AB11_RS03250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AB11_RS03250;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,8587;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 8874 9467 . - . ID=gene-AB11_RS03255;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AB11_RS03255;old_locus_tag=AB11_0324 NZ_JHDH01000088.1 Protein Homology CDS 8874 9467 . - 0 ID=cds-WP_001299021.1;Parent=gene-AB11_RS03255;Dbxref=GenBank:WP_001299021.1;Name=WP_001299021.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AB11_RS03255;product=reactive chlorine species resistance protein RclC;protein_id=WP_001299021.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 9479 9715 . - . ID=gene-AB11_RS03260;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AB11_RS03260;old_locus_tag=AB11_0325 NZ_JHDH01000088.1 Protein Homology CDS 9479 9715 . - 0 ID=cds-WP_000474084.1;Parent=gene-AB11_RS03260;Dbxref=GenBank:WP_000474084.1;Name=WP_000474084.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AB11_RS03260;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474084.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 9824 11149 . - . ID=gene-AB11_RS03265;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AB11_RS03265;old_locus_tag=AB11_0326 NZ_JHDH01000088.1 Protein Homology CDS 9824 11149 . - 0 ID=cds-WP_001046307.1;Parent=gene-AB11_RS03265;Dbxref=GenBank:WP_001046307.1;Name=WP_001046307.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AB11_RS03265;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046307.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 11375 12229 . + . ID=gene-AB11_RS03270;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AB11_RS03270;old_locus_tag=AB11_0327 NZ_JHDH01000088.1 Protein Homology CDS 11375 12229 . + 0 ID=cds-WP_000339594.1;Parent=gene-AB11_RS03270;Dbxref=GenBank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414839.1;locus_tag=AB11_RS03270;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339594.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 12756 13475 . + . ID=gene-AB11_RS03275;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AB11_RS03275;old_locus_tag=AB11_0329 NZ_JHDH01000088.1 Protein Homology CDS 12756 13475 . + 0 ID=cds-WP_001102108.1;Parent=gene-AB11_RS03275;Dbxref=GenBank:WP_001102108.1;Name=WP_001102108.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AB11_RS03275;product=(Fe-S)-binding protein;protein_id=WP_001102108.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 13486 14913 . + . ID=gene-AB11_RS03280;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AB11_RS03280;old_locus_tag=AB11_0330 NZ_JHDH01000088.1 Protein Homology CDS 13486 14913 . + 0 ID=cds-WP_000023927.1;Parent=gene-AB11_RS03280;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AB11_RS03280;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 14906 15601 . + . ID=gene-AB11_RS03285;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AB11_RS03285;old_locus_tag=AB11_0331 NZ_JHDH01000088.1 Protein Homology CDS 14906 15601 . + 0 ID=cds-WP_000370307.1;Parent=gene-AB11_RS03285;Dbxref=GenBank:WP_000370307.1;Name=WP_000370307.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AB11_RS03285;product=LutC/YkgG family protein;protein_id=WP_000370307.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 15844 16512 . - . ID=gene-AB11_RS03290;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AB11_RS03290;old_locus_tag=AB11_0332 NZ_JHDH01000088.1 Protein Homology CDS 15844 16512 . - 0 ID=cds-WP_001209100.1;Parent=gene-AB11_RS03290;Dbxref=GenBank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AB11_RS03290;product=protein YkgH;protein_id=WP_001209100.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 16725 18395 . - . ID=gene-AB11_RS03295;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AB11_RS03295;old_locus_tag=AB11_0333 NZ_JHDH01000088.1 Protein Homology CDS 16725 18395 . - 0 ID=cds-WP_001159094.1;Parent=gene-AB11_RS03295;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AB11_RS03295;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 18409 19881 . - . ID=gene-AB11_RS03300;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AB11_RS03300;old_locus_tag=AB11_0334 NZ_JHDH01000088.1 Protein Homology CDS 18409 19881 . - 0 ID=cds-WP_000089110.1;Parent=gene-AB11_RS03300;Dbxref=GenBank:WP_000089110.1;Name=WP_000089110.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AB11_RS03300;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089110.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 19895 20482 . - . ID=gene-AB11_RS03305;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AB11_RS03305;old_locus_tag=AB11_0335 NZ_JHDH01000088.1 Protein Homology CDS 19895 20482 . - 0 ID=cds-WP_001335745.1;Parent=gene-AB11_RS03305;Dbxref=GenBank:WP_001335745.1;Name=WP_001335745.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AB11_RS03305;product=transcriptional regulator BetI;protein_id=WP_001335745.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 20611 22644 . + . ID=gene-AB11_RS03310;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AB11_RS03310;old_locus_tag=AB11_0336 NZ_JHDH01000088.1 Protein Homology CDS 20611 22644 . + 0 ID=cds-WP_000131044.1;Parent=gene-AB11_RS03310;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AB11_RS03310;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JHDH01000088.1 RefSeq gene 22950 23024 . + . ID=gene-AB11_RS03315;Name=AB11_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03315 NZ_JHDH01000088.1 Protein Homology CDS 22950 23024 . + 0 ID=cds-WP_120795374.1;Parent=gene-AB11_RS03315;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AB11_RS03315;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JHDH01000088.1 RefSeq pseudogene 23252 23732 . + . ID=gene-AB11_RS03320;Name=AB11_RS03320;end_range=23732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03320;old_locus_tag=AB11_0337;partial=true;pseudo=true NZ_JHDH01000088.1 Protein Homology CDS 23252 23732 . + 0 ID=cds-AB11_RS03320;Parent=gene-AB11_RS03320;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=23732,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611646.1;locus_tag=AB11_RS03320;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000089.1 1 8381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000089.1 RefSeq region 1 8381 . + . ID=NZ_JHDH01000089.1:1..8381;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000089.1 RefSeq gene 1 476 . + . ID=gene-AB11_RS03325;Name=AB11_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03325;old_locus_tag=AB11_0338;partial=true;start_range=.,1 NZ_JHDH01000089.1 Protein Homology CDS 1 476 . + 2 ID=cds-WP_000308652.1;Parent=gene-AB11_RS03325;Dbxref=GenBank:WP_000308652.1;Name=WP_000308652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS03325;partial=true;product=IS3 family transposase;protein_id=WP_000308652.1;start_range=.,1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 851 1939 . + . ID=gene-AB11_RS03330;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AB11_RS03330;old_locus_tag=AB11_0339 NZ_JHDH01000089.1 Protein Homology CDS 851 1939 . + 0 ID=cds-WP_001301264.1;Parent=gene-AB11_RS03330;Dbxref=GenBank:WP_001301264.1;Name=WP_001301264.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AB11_RS03330;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001301264.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 1981 2913 . - . ID=gene-AB11_RS03335;Name=AB11_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03335;old_locus_tag=AB11_0340 NZ_JHDH01000089.1 Protein Homology CDS 1981 2913 . - 0 ID=cds-WP_001084399.1;Parent=gene-AB11_RS03335;Dbxref=GenBank:WP_001084399.1;Name=WP_001084399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AB11_RS03335;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084399.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 3005 3502 . - . ID=gene-AB11_RS03340;Name=AB11_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03340;old_locus_tag=AB11_0341 NZ_JHDH01000089.1 Protein Homology CDS 3005 3502 . - 0 ID=cds-WP_001013892.1;Parent=gene-AB11_RS03340;Dbxref=GenBank:WP_001013892.1;Name=WP_001013892.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AB11_RS03340;product=DUF1097 domain-containing protein;protein_id=WP_001013892.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 3760 4365 . + . ID=gene-AB11_RS03345;Name=AB11_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03345;old_locus_tag=AB11_0342 NZ_JHDH01000089.1 Protein Homology CDS 3760 4365 . + 0 ID=cds-WP_000023635.1;Parent=gene-AB11_RS03345;Dbxref=GenBank:WP_000023635.1;Name=WP_000023635.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AB11_RS03345;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 4405 5268 . + . ID=gene-AB11_RS03350;Name=AB11_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03350 NZ_JHDH01000089.1 Protein Homology CDS 4405 5268 . + 0 ID=cds-WP_001310582.1;Parent=gene-AB11_RS03350;Dbxref=GenBank:WP_001310582.1;Name=WP_001310582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AB11_RS03350;product=DUF2877 domain-containing protein;protein_id=WP_001310582.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 5258 6805 . + . ID=gene-AB11_RS03355;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB11_RS03355;old_locus_tag=AB11_0345 NZ_JHDH01000089.1 Protein Homology CDS 5258 6805 . + 0 ID=cds-WP_000111836.1;Parent=gene-AB11_RS03355;Dbxref=GenBank:WP_000111836.1;Name=WP_000111836.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AB11_RS03355;product=acyl-CoA synthetase FdrA;protein_id=WP_000111836.1;transl_table=11 NZ_JHDH01000089.1 RefSeq gene 6805 8223 . + . ID=gene-AB11_RS03360;Name=AB11_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03360;old_locus_tag=AB11_0346 NZ_JHDH01000089.1 Protein Homology CDS 6805 8223 . + 0 ID=cds-WP_000083429.1;Parent=gene-AB11_RS03360;Dbxref=GenBank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AB11_RS03360;product=YlbE family protein;protein_id=WP_000083429.1;transl_table=11 ##sequence-region NZ_JHDH01000090.1 1 50715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000090.1 RefSeq region 1 50715 . + . ID=NZ_JHDH01000090.1:1..50715;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000090.1 RefSeq pseudogene 1 277 . + . ID=gene-AB11_RS03365;Name=AB11_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03365;old_locus_tag=AB11_0348;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000090.1 Protein Homology CDS 1 277 . + 1 ID=cds-AB11_RS03365;Parent=gene-AB11_RS03365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AB11_RS03365;partial=true;product=DUF1116 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 327 623 . + . ID=gene-AB11_RS03370;Name=yahH;gbkey=Gene;gene=yahH;gene_biotype=protein_coding;locus_tag=AB11_RS03370;old_locus_tag=AB11_0349 NZ_JHDH01000090.1 GeneMarkS-2+ CDS 327 623 . + 0 ID=cds-WP_001295687.1;Parent=gene-AB11_RS03370;Dbxref=GenBank:WP_001295687.1;Name=WP_001295687.1;gbkey=CDS;gene=yahH;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS03370;product=protein YahH;protein_id=WP_001295687.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 699 1649 . + . ID=gene-AB11_RS03375;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AB11_RS03375;old_locus_tag=AB11_0350 NZ_JHDH01000090.1 Protein Homology CDS 699 1649 . + 0 ID=cds-WP_000661619.1;Parent=gene-AB11_RS03375;Dbxref=GenBank:WP_000661619.1;Name=WP_000661619.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AB11_RS03375;product=carbamate kinase family protein;protein_id=WP_000661619.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 1659 3041 . + . ID=gene-AB11_RS03380;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AB11_RS03380;old_locus_tag=AB11_0351 NZ_JHDH01000090.1 Protein Homology CDS 1659 3041 . + 0 ID=cds-WP_000665120.1;Parent=gene-AB11_RS03380;Dbxref=GenBank:WP_000665120.1;Name=WP_000665120.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AB11_RS03380;product=amidohydrolase family protein;protein_id=WP_000665120.1;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 3257 3331 . + . ID=gene-AB11_RS25490;Name=AB11_RS25490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25490;partial=true;pseudo=true;start_range=.,3257 NZ_JHDH01000090.1 Protein Homology CDS 3257 3331 . + 0 ID=cds-AB11_RS25490;Parent=gene-AB11_RS25490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AB11_RS25490;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3257;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 3418 4467 . + . ID=gene-AB11_RS03385;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AB11_RS03385;old_locus_tag=AB11_0352 NZ_JHDH01000090.1 Protein Homology CDS 3418 4467 . + 0 ID=cds-WP_000692754.1;Parent=gene-AB11_RS03385;Dbxref=GenBank:WP_000692754.1;Name=WP_000692754.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AB11_RS03385;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692754.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 4710 5525 . + . ID=gene-AB11_RS03390;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AB11_RS03390;old_locus_tag=AB11_0353 NZ_JHDH01000090.1 Protein Homology CDS 4710 5525 . + 0 ID=cds-WP_001301260.1;Parent=gene-AB11_RS03390;Dbxref=GenBank:WP_001301260.1;Name=WP_001301260.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=AB11_RS03390;product=protein YahL;protein_id=WP_001301260.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 5786 5968 . + . ID=gene-AB11_RS26215;Name=AB11_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26215 NZ_JHDH01000090.1 Protein Homology CDS 5786 5968 . + 0 ID=cds-WP_437438054.1;Parent=gene-AB11_RS26215;Dbxref=GenBank:WP_437438054.1;Name=WP_437438054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606033.1;locus_tag=AB11_RS26215;product=hypothetical protein;protein_id=WP_437438054.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 5938 6183 . + . ID=gene-AB11_RS03395;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AB11_RS03395 NZ_JHDH01000090.1 Protein Homology CDS 5938 6183 . + 0 ID=cds-WP_000290616.1;Parent=gene-AB11_RS03395;Dbxref=GenBank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AB11_RS03395;product=protein YahM;protein_id=WP_000290616.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 6200 6871 . - . ID=gene-AB11_RS03400;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AB11_RS03400;old_locus_tag=AB11_0355 NZ_JHDH01000090.1 Protein Homology CDS 6200 6871 . - 0 ID=cds-WP_000983410.1;Parent=gene-AB11_RS03400;Dbxref=GenBank:WP_000983410.1;Name=WP_000983410.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AB11_RS03400;product=LysE family transporter;protein_id=WP_000983410.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 7018 7293 . + . ID=gene-AB11_RS03405;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AB11_RS03405;old_locus_tag=AB11_0356 NZ_JHDH01000090.1 Protein Homology CDS 7018 7293 . + 0 ID=cds-WP_000691956.1;Parent=gene-AB11_RS03405;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AB11_RS03405;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 7391 8977 . - . ID=gene-AB11_RS03410;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AB11_RS03410;old_locus_tag=AB11_0358 NZ_JHDH01000090.1 Protein Homology CDS 7391 8977 . - 0 ID=cds-WP_000941041.1;Parent=gene-AB11_RS03410;Dbxref=GenBank:WP_000941041.1;Name=WP_000941041.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AB11_RS03410;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941041.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 9216 10106 . + . ID=gene-AB11_RS03415;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AB11_RS03415;old_locus_tag=AB11_0359 NZ_JHDH01000090.1 Protein Homology CDS 9216 10106 . + 0 ID=cds-WP_000052206.1;Parent=gene-AB11_RS03415;Dbxref=GenBank:WP_000052206.1;Name=WP_000052206.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AB11_RS03415;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 10825 11994 . + . ID=gene-AB11_RS03420;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AB11_RS03420;old_locus_tag=AB11_0360 NZ_JHDH01000090.1 Protein Homology CDS 10825 11994 . + 0 ID=cds-WP_001285927.1;Parent=gene-AB11_RS03420;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AB11_RS03420;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 12028 13479 . + . ID=gene-AB11_RS03425;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AB11_RS03425;old_locus_tag=AB11_0361 NZ_JHDH01000090.1 Protein Homology CDS 12028 13479 . + 0 ID=cds-WP_001275859.1;Parent=gene-AB11_RS03425;Dbxref=GenBank:WP_001275859.1;Name=WP_001275859.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AB11_RS03425;product=2-methylcitrate dehydratase;protein_id=WP_001275859.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 13519 15405 . + . ID=gene-AB11_RS03430;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AB11_RS03430;old_locus_tag=AB11_0362 NZ_JHDH01000090.1 Protein Homology CDS 13519 15405 . + 0 ID=cds-WP_032222985.1;Parent=gene-AB11_RS03430;Dbxref=GenBank:WP_032222985.1;Name=WP_032222985.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414869.1;locus_tag=AB11_RS03430;product=propionate--CoA ligase;protein_id=WP_032222985.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 15735 16994 . + . ID=gene-AB11_RS03435;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AB11_RS03435;old_locus_tag=AB11_0364 NZ_JHDH01000090.1 Protein Homology CDS 15735 16994 . + 0 ID=cds-WP_000076233.1;Parent=gene-AB11_RS03435;Dbxref=GenBank:WP_000076233.1;Name=WP_000076233.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AB11_RS03435;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 16984 18267 . + . ID=gene-AB11_RS03440;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AB11_RS03440;old_locus_tag=AB11_0365 NZ_JHDH01000090.1 Protein Homology CDS 16984 18267 . + 0 ID=cds-WP_001301240.1;Parent=gene-AB11_RS03440;Dbxref=GenBank:WP_001301240.1;Name=WP_001301240.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AB11_RS03440;product=cytosine/isoguanine deaminase;protein_id=WP_001301240.1;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 18404 18487 . - . ID=gene-AB11_RS26000;Name=AB11_RS26000;end_range=18487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26000;partial=true;pseudo=true NZ_JHDH01000090.1 Protein Homology CDS 18404 18487 . - 0 ID=cds-AB11_RS26000;Parent=gene-AB11_RS26000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AB11_RS26000;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 18604 18687 . - . ID=gene-AB11_RS26005;Name=AB11_RS26005;end_range=18687,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26005;partial=true;pseudo=true NZ_JHDH01000090.1 Protein Homology CDS 18604 18687 . - 0 ID=cds-AB11_RS26005;Parent=gene-AB11_RS26005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AB11_RS26005;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 18804 19703 . - . ID=gene-AB11_RS03445;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AB11_RS03445;old_locus_tag=AB11_0366 NZ_JHDH01000090.1 Protein Homology CDS 18804 19703 . - 0 ID=cds-WP_000952503.1;Parent=gene-AB11_RS03445;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AB11_RS03445;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 19808 20467 . + . ID=gene-AB11_RS03450;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AB11_RS03450;old_locus_tag=AB11_0367 NZ_JHDH01000090.1 Protein Homology CDS 19808 20467 . + 0 ID=cds-WP_000658652.1;Parent=gene-AB11_RS03450;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AB11_RS03450;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 20498 20968 . + . ID=gene-AB11_RS03455;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AB11_RS03455;old_locus_tag=AB11_0368 NZ_JHDH01000090.1 Protein Homology CDS 20498 20968 . + 0 ID=cds-WP_000616243.1;Parent=gene-AB11_RS03455;Dbxref=GenBank:WP_000616243.1;Name=WP_000616243.1;Ontology_term=GO:0006082,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=organic acid metabolic process|0006082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AB11_RS03455;product=cyanase;protein_id=WP_000616243.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 20974 22155 . + . ID=gene-AB11_RS03460;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AB11_RS03460;old_locus_tag=AB11_0369 NZ_JHDH01000090.1 Protein Homology CDS 20974 22155 . + 0 ID=cds-WP_001301263.1;Parent=gene-AB11_RS03460;Dbxref=GenBank:WP_001301263.1;Name=WP_001301263.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AB11_RS03460;product=cyanate transporter CynX;protein_id=WP_001301263.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 22258 22869 . - . ID=gene-AB11_RS03465;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AB11_RS03465;old_locus_tag=AB11_0370 NZ_JHDH01000090.1 Protein Homology CDS 22258 22869 . - 0 ID=cds-WP_001335915.1;Parent=gene-AB11_RS03465;Dbxref=GenBank:WP_001335915.1;Name=WP_001335915.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AB11_RS03465;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 22935 24188 . - . ID=gene-AB11_RS03470;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AB11_RS03470;old_locus_tag=AB11_0371 NZ_JHDH01000090.1 Protein Homology CDS 22935 24188 . - 0 ID=cds-WP_000291549.1;Parent=gene-AB11_RS03470;Dbxref=GenBank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AB11_RS03470;product=lactose permease;protein_id=WP_000291549.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 24240 27314 . - . ID=gene-AB11_RS03475;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AB11_RS03475;old_locus_tag=AB11_0372 NZ_JHDH01000090.1 Protein Homology CDS 24240 27314 . - 0 ID=cds-WP_021570699.1;Parent=gene-AB11_RS03475;Dbxref=GenBank:WP_021570699.1;Name=WP_021570699.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AB11_RS03475;product=beta-galactosidase;protein_id=WP_021570699.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 27437 28519 . - . ID=gene-AB11_RS03480;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AB11_RS03480;old_locus_tag=AB11_0373 NZ_JHDH01000090.1 Protein Homology CDS 27437 28519 . - 0 ID=cds-WP_000805902.1;Parent=gene-AB11_RS03480;Dbxref=GenBank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AB11_RS03480;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 28596 29429 . - . ID=gene-AB11_RS03485;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AB11_RS03485;old_locus_tag=AB11_0374 NZ_JHDH01000090.1 Protein Homology CDS 28596 29429 . - 0 ID=cds-WP_001301325.1;Parent=gene-AB11_RS03485;Dbxref=GenBank:WP_001301325.1;Name=WP_001301325.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AB11_RS03485;product=DNA-binding transcriptional regulator;protein_id=WP_001301325.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 29620 31284 . + . ID=gene-AB11_RS03490;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AB11_RS03490;old_locus_tag=AB11_0375 NZ_JHDH01000090.1 Protein Homology CDS 29620 31284 . + 0 ID=cds-WP_001007407.1;Parent=gene-AB11_RS03490;Dbxref=GenBank:WP_001007407.1;Name=WP_001007407.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414881.1;locus_tag=AB11_RS03490;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007407.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 31286 32230 . + . ID=gene-AB11_RS03495;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AB11_RS03495;old_locus_tag=AB11_0376 NZ_JHDH01000090.1 Protein Homology CDS 31286 32230 . + 0 ID=cds-WP_000543457.1;Parent=gene-AB11_RS03495;Dbxref=GenBank:WP_000543457.1;Name=WP_000543457.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AB11_RS03495;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543457.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 32248 33114 . + . ID=gene-AB11_RS03500;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AB11_RS03500;old_locus_tag=AB11_0377 NZ_JHDH01000090.1 Protein Homology CDS 32248 33114 . + 0 ID=cds-WP_000121907.1;Parent=gene-AB11_RS03500;Dbxref=GenBank:WP_000121907.1;Name=WP_000121907.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AB11_RS03500;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121907.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 33124 33933 . + . ID=gene-AB11_RS03505;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AB11_RS03505;old_locus_tag=AB11_0378 NZ_JHDH01000090.1 Protein Homology CDS 33124 33933 . + 0 ID=cds-WP_000160710.1;Parent=gene-AB11_RS03505;Dbxref=GenBank:WP_000160710.1;Name=WP_000160710.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AB11_RS03505;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160710.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 33930 34880 . + . ID=gene-AB11_RS03510;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AB11_RS03510;old_locus_tag=AB11_0379 NZ_JHDH01000090.1 Protein Homology CDS 33930 34880 . + 0 ID=cds-WP_000044314.1;Parent=gene-AB11_RS03510;Dbxref=GenBank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AB11_RS03510;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 34877 35890 . + . ID=gene-AB11_RS03515;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AB11_RS03515;old_locus_tag=AB11_0380 NZ_JHDH01000090.1 Protein Homology CDS 34877 35890 . + 0 ID=cds-WP_001013499.1;Parent=gene-AB11_RS03515;Dbxref=GenBank:WP_001013499.1;Name=WP_001013499.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AB11_RS03515;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 36367 37578 . + . ID=gene-AB11_RS03520;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AB11_RS03520;old_locus_tag=AB11_0381 NZ_JHDH01000090.1 Protein Homology CDS 36367 37578 . + 0 ID=cds-WP_032188389.1;Parent=gene-AB11_RS03520;Dbxref=GenBank:WP_032188389.1;Name=WP_032188389.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414887.2;locus_tag=AB11_RS03520;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_032188389.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 37680 38219 . + . ID=gene-AB11_RS03525;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AB11_RS03525;old_locus_tag=AB11_0382 NZ_JHDH01000090.1 Protein Homology CDS 37680 38219 . + 0 ID=cds-WP_001096705.1;Parent=gene-AB11_RS03525;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AB11_RS03525;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 38343 39176 . - . ID=gene-AB11_RS03530;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AB11_RS03530;old_locus_tag=AB11_0383 NZ_JHDH01000090.1 Protein Homology CDS 38343 39176 . - 0 ID=cds-WP_000419042.1;Parent=gene-AB11_RS03530;Dbxref=GenBank:WP_000419042.1;Name=WP_000419042.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AB11_RS03530;product=S-formylglutathione hydrolase;protein_id=WP_000419042.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 39269 40378 . - . ID=gene-AB11_RS03535;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AB11_RS03535;old_locus_tag=AB11_0384 NZ_JHDH01000090.1 Protein Homology CDS 39269 40378 . - 0 ID=cds-WP_000842102.1;Parent=gene-AB11_RS03535;Dbxref=GenBank:WP_000842102.1;Name=WP_000842102.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AB11_RS03535;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842102.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 40413 40688 . - . ID=gene-AB11_RS03540;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AB11_RS03540 NZ_JHDH01000090.1 Protein Homology CDS 40413 40688 . - 0 ID=cds-WP_001141271.1;Parent=gene-AB11_RS03540;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AB11_RS03540;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 40875 41648 . - . ID=gene-AB11_RS03545;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AB11_RS03545;old_locus_tag=AB11_0386 NZ_JHDH01000090.1 Protein Homology CDS 40875 41648 . - 0 ID=cds-WP_000596085.1;Parent=gene-AB11_RS03545;Dbxref=GenBank:WP_000596085.1;Name=WP_000596085.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AB11_RS03545;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000596085.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 41650 42231 . - . ID=gene-AB11_RS03550;Name=AB11_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03550;old_locus_tag=AB11_0387 NZ_JHDH01000090.1 Protein Homology CDS 41650 42231 . - 0 ID=cds-WP_024194469.1;Parent=gene-AB11_RS03550;Dbxref=GenBank:WP_024194469.1;Name=WP_024194469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308433.1;locus_tag=AB11_RS03550;product=acetyltransferase;protein_id=WP_024194469.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 42209 43405 . - . ID=gene-AB11_RS03555;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AB11_RS03555;old_locus_tag=AB11_0388 NZ_JHDH01000090.1 Protein Homology CDS 42209 43405 . - 0 ID=cds-WP_000860441.1;Parent=gene-AB11_RS03555;Dbxref=GenBank:WP_000860441.1;Name=WP_000860441.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AB11_RS03555;product=glycosyltransferase;protein_id=WP_000860441.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 43430 43549 . + . ID=gene-AB11_RS26220;Name=AB11_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26220 NZ_JHDH01000090.1 Protein Homology CDS 43430 43549 . + 0 ID=cds-WP_123059036.1;Parent=gene-AB11_RS26220;Dbxref=GenBank:WP_123059036.1;Name=WP_123059036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AB11_RS26220;product=hypothetical protein;protein_id=WP_123059036.1;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 43676 44086 . - . ID=gene-AB11_RS26225;Name=AB11_RS26225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26225;partial=true;pseudo=true;start_range=.,43676 NZ_JHDH01000090.1 Protein Homology CDS 43676 44086 . - 0 ID=cds-AB11_RS26225;Parent=gene-AB11_RS26225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AB11_RS26225;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,43676;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 44702 45664 . + . ID=gene-AB11_RS03565;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AB11_RS03565;old_locus_tag=AB11_0391 NZ_JHDH01000090.1 Protein Homology CDS 44702 45664 . + 0 ID=cds-WP_001556442.1;Parent=gene-AB11_RS03565;Dbxref=GenBank:WP_001556442.1;Name=WP_001556442.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AB11_RS03565;product=taurine ABC transporter substrate-binding protein;protein_id=WP_001556442.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 45677 46444 . + . ID=gene-AB11_RS03570;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AB11_RS03570;old_locus_tag=AB11_0392 NZ_JHDH01000090.1 Protein Homology CDS 45677 46444 . + 0 ID=cds-WP_000939399.1;Parent=gene-AB11_RS03570;Dbxref=GenBank:WP_000939399.1;Name=WP_000939399.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=AB11_RS03570;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939399.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 46441 47268 . + . ID=gene-AB11_RS03575;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AB11_RS03575;old_locus_tag=AB11_0393 NZ_JHDH01000090.1 Protein Homology CDS 46441 47268 . + 0 ID=cds-WP_000114585.1;Parent=gene-AB11_RS03575;Dbxref=GenBank:WP_000114585.1;Name=WP_000114585.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=AB11_RS03575;product=taurine ABC transporter permease TauC;protein_id=WP_000114585.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 47265 48116 . + . ID=gene-AB11_RS03580;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AB11_RS03580;old_locus_tag=AB11_0394 NZ_JHDH01000090.1 Protein Homology CDS 47265 48116 . + 0 ID=cds-WP_021570701.1;Parent=gene-AB11_RS03580;Dbxref=GenBank:WP_021570701.1;Name=WP_021570701.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AB11_RS03580;product=taurine dioxygenase;protein_id=WP_021570701.1;transl_table=11 NZ_JHDH01000090.1 RefSeq gene 48223 49197 . - . ID=gene-AB11_RS03585;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AB11_RS03585;old_locus_tag=AB11_0395 NZ_JHDH01000090.1 Protein Homology CDS 48223 49197 . - 0 ID=cds-WP_001295337.1;Parent=gene-AB11_RS03585;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AB11_RS03585;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 49720 50295 . + . ID=gene-AB11_RS03590;Name=AB11_RS03590;end_range=50295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03590;old_locus_tag=AB11_0396;partial=true;pseudo=true NZ_JHDH01000090.1 Protein Homology CDS 49720 50295 . + 0 ID=cds-AB11_RS03590;Parent=gene-AB11_RS03590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=50295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=AB11_RS03590;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000090.1 RefSeq pseudogene 50376 50715 . + . ID=gene-AB11_RS03595;Name=AB11_RS03595;end_range=50715,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03595;old_locus_tag=AB11_0397;partial=true;pseudo=true NZ_JHDH01000090.1 Protein Homology CDS 50376 50715 . + 0 ID=cds-AB11_RS03595;Parent=gene-AB11_RS03595;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=50715,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS03595;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000091.1 1 132522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000091.1 RefSeq region 1 132522 . + . ID=NZ_JHDH01000091.1:1..132522;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000091.1 RefSeq gene 1 330 . - . ID=gene-AB11_RS03600;Name=AB11_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03600;old_locus_tag=AB11_0398;partial=true;start_range=.,1 NZ_JHDH01000091.1 Protein Homology CDS 1 330 . - 0 ID=cds-WP_000567752.1;Parent=gene-AB11_RS03600;Dbxref=GenBank:WP_000567752.1;Name=WP_000567752.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976766.1;locus_tag=AB11_RS03600;partial=true;product=transposase;protein_id=WP_000567752.1;start_range=.,1;transl_table=11 NZ_JHDH01000091.1 RefSeq pseudogene 398 2191 . + . ID=gene-AB11_RS03605;Name=AB11_RS03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03605;old_locus_tag=AB11_0399;partial=true;pseudo=true;start_range=.,398 NZ_JHDH01000091.1 Protein Homology CDS 398 2191 . + 0 ID=cds-AB11_RS03605;Parent=gene-AB11_RS03605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308451.1;locus_tag=AB11_RS03605;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,398;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 2279 2902 . + . ID=gene-AB11_RS03610;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AB11_RS03610;old_locus_tag=AB11_0400 NZ_JHDH01000091.1 Protein Homology CDS 2279 2902 . + 0 ID=cds-WP_001295817.1;Parent=gene-AB11_RS03610;Dbxref=GenBank:WP_001295817.1;Name=WP_001295817.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AB11_RS03610;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295817.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 2903 4060 . - . ID=gene-AB11_RS03615;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AB11_RS03615;old_locus_tag=AB11_0401 NZ_JHDH01000091.1 Protein Homology CDS 2903 4060 . - 0 ID=cds-WP_000830738.1;Parent=gene-AB11_RS03615;Dbxref=GenBank:WP_000830738.1;Name=WP_000830738.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AB11_RS03615;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830738.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 4412 5632 . + . ID=gene-AB11_RS03620;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AB11_RS03620;old_locus_tag=AB11_0403 NZ_JHDH01000091.1 Protein Homology CDS 4412 5632 . + 0 ID=cds-WP_000477009.1;Parent=gene-AB11_RS03620;Dbxref=GenBank:WP_000477009.1;Name=WP_000477009.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706191.2;locus_tag=AB11_RS03620;product=peptide antibiotic transporter SbmA;protein_id=WP_000477009.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 5645 6739 . + . ID=gene-AB11_RS03625;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AB11_RS03625;old_locus_tag=AB11_0404 NZ_JHDH01000091.1 Protein Homology CDS 5645 6739 . + 0 ID=cds-WP_000092069.1;Parent=gene-AB11_RS03625;Dbxref=GenBank:WP_000092069.1;Name=WP_000092069.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706190.1;locus_tag=AB11_RS03625;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092069.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 6798 7106 . - . ID=gene-AB11_RS03630;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AB11_RS03630;old_locus_tag=AB11_0405 NZ_JHDH01000091.1 Protein Homology CDS 6798 7106 . - 0 ID=cds-WP_000763151.1;Parent=gene-AB11_RS03630;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AB11_RS03630;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 7366 7578 . + . ID=gene-AB11_RS03635;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AB11_RS03635;old_locus_tag=AB11_0406 NZ_JHDH01000091.1 Protein Homology CDS 7366 7578 . + 0 ID=cds-WP_001295334.1;Parent=gene-AB11_RS03635;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AB11_RS03635;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 7602 8696 . - . ID=gene-AB11_RS03640;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AB11_RS03640;old_locus_tag=AB11_0407 NZ_JHDH01000091.1 Protein Homology CDS 7602 8696 . - 0 ID=cds-WP_000413677.1;Parent=gene-AB11_RS03640;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AB11_RS03640;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 8774 8977 . + . ID=gene-AB11_RS03645;Name=AB11_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03645;old_locus_tag=AB11_0408 NZ_JHDH01000091.1 Protein Homology CDS 8774 8977 . + 0 ID=cds-WP_001300163.1;Parent=gene-AB11_RS03645;Dbxref=GenBank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AB11_RS03645;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 9159 9419 . + . ID=gene-AB11_RS03650;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AB11_RS03650;old_locus_tag=AB11_0409 NZ_JHDH01000091.1 Protein Homology CDS 9159 9419 . + 0 ID=cds-WP_000792970.1;Parent=gene-AB11_RS03650;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AB11_RS03650;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 9520 10935 . + . ID=gene-AB11_RS03655;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AB11_RS03655;old_locus_tag=AB11_0410 NZ_JHDH01000091.1 Protein Homology CDS 9520 10935 . + 0 ID=cds-WP_001351635.1;Parent=gene-AB11_RS03655;Dbxref=GenBank:WP_001351635.1;Name=WP_001351635.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AB11_RS03655;product=alkaline phosphatase;protein_id=WP_001351635.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 11054 11374 . + . ID=gene-AB11_RS03660;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AB11_RS03660;old_locus_tag=AB11_0411 NZ_JHDH01000091.1 Protein Homology CDS 11054 11374 . + 0 ID=cds-WP_001295332.1;Parent=gene-AB11_RS03660;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AB11_RS03660;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 11476 12591 . + . ID=gene-AB11_RS03665;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AB11_RS03665;old_locus_tag=AB11_0412 NZ_JHDH01000091.1 Protein Homology CDS 11476 12591 . + 0 ID=cds-WP_000484048.1;Parent=gene-AB11_RS03665;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AB11_RS03665;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 12608 13417 . - . ID=gene-AB11_RS03670;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AB11_RS03670;old_locus_tag=AB11_0413 NZ_JHDH01000091.1 Protein Homology CDS 12608 13417 . - 0 ID=cds-WP_001295331.1;Parent=gene-AB11_RS03670;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AB11_RS03670;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 13537 14001 . + . ID=gene-AB11_RS03675;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AB11_RS03675;old_locus_tag=AB11_0414 NZ_JHDH01000091.1 Protein Homology CDS 13537 14001 . + 0 ID=cds-WP_000158153.1;Parent=gene-AB11_RS03675;Dbxref=GenBank:WP_000158153.1;Name=WP_000158153.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619195.1;locus_tag=AB11_RS03675;product=YaiI/YqxD family protein;protein_id=WP_000158153.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 14178 14702 . + . ID=gene-AB11_RS03680;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AB11_RS03680;old_locus_tag=AB11_0415 NZ_JHDH01000091.1 Protein Homology CDS 14178 14702 . + 0 ID=cds-WP_000193393.1;Parent=gene-AB11_RS03680;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AB11_RS03680;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 14752 14943 . + . ID=gene-AB11_RS03685;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AB11_RS03685;old_locus_tag=AB11_0416 NZ_JHDH01000091.1 Protein Homology CDS 14752 14943 . + 0 ID=cds-WP_001142439.1;Parent=gene-AB11_RS03685;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AB11_RS03685;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 15201 15878 . + . ID=gene-AB11_RS03690;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AB11_RS03690;old_locus_tag=AB11_0417 NZ_JHDH01000091.1 Protein Homology CDS 15201 15878 . + 0 ID=cds-WP_001276403.1;Parent=gene-AB11_RS03690;Dbxref=GenBank:WP_001276403.1;Name=WP_001276403.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308467.1;locus_tag=AB11_RS03690;product=AroM family protein;protein_id=WP_001276403.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 15950 16234 . + . ID=gene-AB11_RS03695;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AB11_RS03695;old_locus_tag=AB11_0418 NZ_JHDH01000091.1 Protein Homology CDS 15950 16234 . + 0 ID=cds-WP_000941942.1;Parent=gene-AB11_RS03695;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AB11_RS03695;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JHDH01000091.1 RefSeq pseudogene 16382 16723 . + . ID=gene-AB11_RS03700;Name=AB11_RS03700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS03700;old_locus_tag=AB11_0419;partial=true;pseudo=true;start_range=.,16382 NZ_JHDH01000091.1 Protein Homology CDS 16382 16723 . + 0 ID=cds-AB11_RS03700;Parent=gene-AB11_RS03700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AB11_RS03700;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,16382;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 16720 16803 . + . ID=gene-AB11_RS03705;Name=AB11_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS03705 NZ_JHDH01000091.1 Protein Homology CDS 16720 16803 . + 0 ID=cds-WP_120795376.1;Parent=gene-AB11_RS03705;Dbxref=GenBank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AB11_RS03705;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 16881 17792 . - . ID=gene-AB11_RS03710;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AB11_RS03710;old_locus_tag=AB11_0420 NZ_JHDH01000091.1 Protein Homology CDS 16881 17792 . - 0 ID=cds-WP_001298537.1;Parent=gene-AB11_RS03710;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AB11_RS03710;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 17917 18825 . + . ID=gene-AB11_RS03715;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AB11_RS03715;old_locus_tag=AB11_0421 NZ_JHDH01000091.1 Protein Homology CDS 17917 18825 . + 0 ID=cds-WP_001219309.1;Parent=gene-AB11_RS03715;Dbxref=GenBank:WP_001219309.1;Name=WP_001219309.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AB11_RS03715;product=fructokinase;protein_id=WP_001219309.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 19280 20464 . - . ID=gene-AB11_RS03720;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AB11_RS03720;old_locus_tag=AB11_0422 NZ_JHDH01000091.1 Protein Homology CDS 19280 20464 . - 0 ID=cds-WP_001494000.1;Parent=gene-AB11_RS03720;Dbxref=GenBank:WP_001494000.1;Name=WP_001494000.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AB11_RS03720;product=MFS transporter AraJ;protein_id=WP_001494000.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 20590 23733 . - . ID=gene-AB11_RS03725;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AB11_RS03725;old_locus_tag=AB11_0423 NZ_JHDH01000091.1 Protein Homology CDS 20590 23733 . - 0 ID=cds-WP_032222993.1;Parent=gene-AB11_RS03725;Dbxref=GenBank:WP_032222993.1;Name=WP_032222993.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706285.1;locus_tag=AB11_RS03725;product=exonuclease subunit SbcC;protein_id=WP_032222993.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 23730 24932 . - . ID=gene-AB11_RS03730;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AB11_RS03730;old_locus_tag=AB11_0424 NZ_JHDH01000091.1 Protein Homology CDS 23730 24932 . - 0 ID=cds-WP_032222995.1;Parent=gene-AB11_RS03730;Dbxref=GenBank:WP_032222995.1;Name=WP_032222995.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AB11_RS03730;product=exonuclease subunit SbcD;protein_id=WP_032222995.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 25122 25811 . + . ID=gene-AB11_RS03735;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AB11_RS03735;old_locus_tag=AB11_0425 NZ_JHDH01000091.1 Protein Homology CDS 25122 25811 . + 0 ID=cds-WP_000113933.1;Parent=gene-AB11_RS03735;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AB11_RS03735;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 25869 27164 . + . ID=gene-AB11_RS03740;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AB11_RS03740;old_locus_tag=AB11_0426 NZ_JHDH01000091.1 Protein Homology CDS 25869 27164 . + 0 ID=cds-WP_032178154.1;Parent=gene-AB11_RS03740;Dbxref=GenBank:WP_032178154.1;Name=WP_032178154.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706288.1;locus_tag=AB11_RS03740;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_032178154.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 27571 28890 . + . ID=gene-AB11_RS03745;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AB11_RS03745;old_locus_tag=AB11_0428 NZ_JHDH01000091.1 Protein Homology CDS 27571 28890 . + 0 ID=cds-WP_000149639.1;Parent=gene-AB11_RS03745;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AB11_RS03745;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 28966 30339 . + . ID=gene-AB11_RS03750;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AB11_RS03750;old_locus_tag=AB11_0429 NZ_JHDH01000091.1 Protein Homology CDS 28966 30339 . + 0 ID=cds-WP_001295329.1;Parent=gene-AB11_RS03750;Dbxref=GenBank:WP_001295329.1;Name=WP_001295329.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AB11_RS03750;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 30495 32312 . + . ID=gene-AB11_RS03755;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AB11_RS03755;old_locus_tag=AB11_0430 NZ_JHDH01000091.1 Protein Homology CDS 30495 32312 . + 0 ID=cds-WP_001310597.1;Parent=gene-AB11_RS03755;Dbxref=GenBank:WP_001310597.1;Name=WP_001310597.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AB11_RS03755;product=maltodextrin glucosidase;protein_id=WP_001310597.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 32317 32898 . - . ID=gene-AB11_RS03760;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AB11_RS03760;old_locus_tag=AB11_0431 NZ_JHDH01000091.1 Protein Homology CDS 32317 32898 . - 0 ID=cds-WP_001009885.1;Parent=gene-AB11_RS03760;Dbxref=GenBank:WP_001009885.1;Name=WP_001009885.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AB11_RS03760;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 32991 34061 . + . ID=gene-AB11_RS03765;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AB11_RS03765;old_locus_tag=AB11_0432 NZ_JHDH01000091.1 Protein Homology CDS 32991 34061 . + 0 ID=cds-WP_001266503.1;Parent=gene-AB11_RS03765;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AB11_RS03765;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 34117 35244 . + . ID=gene-AB11_RS03770;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AB11_RS03770;old_locus_tag=AB11_0433 NZ_JHDH01000091.1 Protein Homology CDS 34117 35244 . + 0 ID=cds-WP_000667319.1;Parent=gene-AB11_RS03770;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AB11_RS03770;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 35267 35599 . + . ID=gene-AB11_RS03775;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AB11_RS03775;old_locus_tag=AB11_0434 NZ_JHDH01000091.1 Protein Homology CDS 35267 35599 . + 0 ID=cds-WP_000007629.1;Parent=gene-AB11_RS03775;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AB11_RS03775;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 35627 37474 . + . ID=gene-AB11_RS03780;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AB11_RS03780;old_locus_tag=AB11_0435 NZ_JHDH01000091.1 Protein Homology CDS 35627 37474 . + 0 ID=cds-WP_000934822.1;Parent=gene-AB11_RS03780;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AB11_RS03780;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 37485 38456 . + . ID=gene-AB11_RS03785;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AB11_RS03785;old_locus_tag=AB11_0436 NZ_JHDH01000091.1 Protein Homology CDS 37485 38456 . + 0 ID=cds-WP_000046637.1;Parent=gene-AB11_RS03785;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AB11_RS03785;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 38585 38932 . + . ID=gene-AB11_RS03790;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AB11_RS03790;old_locus_tag=AB11_0437 NZ_JHDH01000091.1 Protein Homology CDS 38585 38932 . + 0 ID=cds-WP_021570705.1;Parent=gene-AB11_RS03790;Dbxref=GenBank:WP_021570705.1;Name=WP_021570705.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AB11_RS03790;product=HNH nuclease YajD;protein_id=WP_021570705.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 39109 39993 . - . ID=gene-AB11_RS03795;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AB11_RS03795;old_locus_tag=AB11_0438 NZ_JHDH01000091.1 Protein Homology CDS 39109 39993 . - 0 ID=cds-WP_001295328.1;Parent=gene-AB11_RS03795;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AB11_RS03795;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 40292 40831 . - . ID=gene-AB11_RS03800;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AB11_RS03800;old_locus_tag=AB11_0439 NZ_JHDH01000091.1 Protein Homology CDS 40292 40831 . - 0 ID=cds-WP_001326929.1;Parent=gene-AB11_RS03800;Dbxref=GenBank:WP_001326929.1;Name=WP_001326929.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AB11_RS03800;product=DUF3251 domain-containing protein;protein_id=WP_001326929.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 40982 41431 . + . ID=gene-AB11_RS03805;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AB11_RS03805;old_locus_tag=AB11_0440 NZ_JHDH01000091.1 Protein Homology CDS 40982 41431 . + 0 ID=cds-WP_000543535.1;Parent=gene-AB11_RS03805;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AB11_RS03805;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 41435 42538 . + . ID=gene-AB11_RS03810;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AB11_RS03810;old_locus_tag=AB11_0441 NZ_JHDH01000091.1 Protein Homology CDS 41435 42538 . + 0 ID=cds-WP_001150457.1;Parent=gene-AB11_RS03810;Dbxref=GenBank:WP_001150457.1;Name=WP_001150457.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AB11_RS03810;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150457.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 42627 43097 . + . ID=gene-AB11_RS03815;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AB11_RS03815;old_locus_tag=AB11_0442 NZ_JHDH01000091.1 Protein Homology CDS 42627 43097 . + 0 ID=cds-WP_001021161.1;Parent=gene-AB11_RS03815;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AB11_RS03815;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 43117 43536 . + . ID=gene-AB11_RS03820;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AB11_RS03820;old_locus_tag=AB11_0443 NZ_JHDH01000091.1 Protein Homology CDS 43117 43536 . + 0 ID=cds-WP_000801125.1;Parent=gene-AB11_RS03820;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AB11_RS03820;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 43614 44591 . + . ID=gene-AB11_RS03825;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AB11_RS03825;old_locus_tag=AB11_0444 NZ_JHDH01000091.1 Protein Homology CDS 43614 44591 . + 0 ID=cds-WP_000742109.1;Parent=gene-AB11_RS03825;Dbxref=GenBank:WP_000742109.1;Name=WP_000742109.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AB11_RS03825;product=thiamine-phosphate kinase;protein_id=WP_000742109.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 44569 45087 . + . ID=gene-AB11_RS03830;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AB11_RS03830;old_locus_tag=AB11_0445 NZ_JHDH01000091.1 Protein Homology CDS 44569 45087 . + 0 ID=cds-WP_000154044.1;Parent=gene-AB11_RS03830;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AB11_RS03830;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 45141 46115 . - . ID=gene-AB11_RS03835;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AB11_RS03835;old_locus_tag=AB11_0446 NZ_JHDH01000091.1 Protein Homology CDS 45141 46115 . - 0 ID=cds-WP_001199800.1;Parent=gene-AB11_RS03835;Dbxref=GenBank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AB11_RS03835;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 46295 48157 . - . ID=gene-AB11_RS03840;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AB11_RS03840;old_locus_tag=AB11_0447 NZ_JHDH01000091.1 Protein Homology CDS 46295 48157 . - 0 ID=cds-WP_032222998.1;Parent=gene-AB11_RS03840;Dbxref=GenBank:WP_032222998.1;Name=WP_032222998.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414954.1;locus_tag=AB11_RS03840;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_032222998.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 48182 49081 . - . ID=gene-AB11_RS03845;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AB11_RS03845;old_locus_tag=AB11_0448 NZ_JHDH01000091.1 Protein Homology CDS 48182 49081 . - 0 ID=cds-WP_032223000.1;Parent=gene-AB11_RS03845;Dbxref=GenBank:WP_032223000.1;Name=WP_032223000.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308502.1;locus_tag=AB11_RS03845;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_032223000.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 49081 49323 . - . ID=gene-AB11_RS03850;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AB11_RS03850;old_locus_tag=AB11_0449 NZ_JHDH01000091.1 Protein Homology CDS 49081 49323 . - 0 ID=cds-WP_001124935.1;Parent=gene-AB11_RS03850;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AB11_RS03850;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 49529 50977 . + . ID=gene-AB11_RS03855;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AB11_RS03855;old_locus_tag=AB11_0450 NZ_JHDH01000091.1 Protein Homology CDS 49529 50977 . + 0 ID=cds-WP_000668662.1;Parent=gene-AB11_RS03855;Dbxref=GenBank:WP_000668662.1;Name=WP_000668662.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AB11_RS03855;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_000668662.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 51031 51621 . - . ID=gene-AB11_RS03860;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AB11_RS03860;old_locus_tag=AB11_0451 NZ_JHDH01000091.1 Protein Homology CDS 51031 51621 . - 0 ID=cds-WP_001276305.1;Parent=gene-AB11_RS03860;Dbxref=GenBank:WP_001276305.1;Name=WP_001276305.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=AB11_RS03860;product=protein deglycase YajL;protein_id=WP_001276305.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 51584 52495 . - . ID=gene-AB11_RS03865;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AB11_RS03865;old_locus_tag=AB11_0452 NZ_JHDH01000091.1 Protein Homology CDS 51584 52495 . - 0 ID=cds-WP_000705865.1;Parent=gene-AB11_RS03865;Dbxref=GenBank:WP_000705865.1;Name=WP_000705865.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AB11_RS03865;product=2-dehydropantoate 2-reductase;protein_id=WP_000705865.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 52663 53154 . + . ID=gene-AB11_RS03870;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AB11_RS03870;old_locus_tag=AB11_0453 NZ_JHDH01000091.1 Protein Homology CDS 52663 53154 . + 0 ID=cds-WP_001138904.1;Parent=gene-AB11_RS03870;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AB11_RS03870;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 53282 54646 . - . ID=gene-AB11_RS03875;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AB11_RS03875;old_locus_tag=AB11_0454 NZ_JHDH01000091.1 Protein Homology CDS 53282 54646 . - 0 ID=cds-WP_001000963.1;Parent=gene-AB11_RS03875;Dbxref=GenBank:WP_001000963.1;Name=WP_001000963.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414961.4;locus_tag=AB11_RS03875;product=MFS transporter;protein_id=WP_001000963.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 54795 55685 . - . ID=gene-AB11_RS03880;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AB11_RS03880;old_locus_tag=AB11_0455 NZ_JHDH01000091.1 Protein Homology CDS 54795 55685 . - 0 ID=cds-WP_000971336.1;Parent=gene-AB11_RS03880;Dbxref=GenBank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AB11_RS03880;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 55697 56026 . - . ID=gene-AB11_RS03885;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AB11_RS03885;old_locus_tag=AB11_0456 NZ_JHDH01000091.1 Protein Homology CDS 55697 56026 . - 0 ID=cds-WP_000019869.1;Parent=gene-AB11_RS03885;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AB11_RS03885;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 56026 56640 . - . ID=gene-AB11_RS03890;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AB11_RS03890;old_locus_tag=AB11_0457 NZ_JHDH01000091.1 Protein Homology CDS 56026 56640 . - 0 ID=cds-WP_000179819.1;Parent=gene-AB11_RS03890;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AB11_RS03890;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 56630 58621 . - . ID=gene-AB11_RS03895;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AB11_RS03895;old_locus_tag=AB11_0458 NZ_JHDH01000091.1 Protein Homology CDS 56630 58621 . - 0 ID=cds-WP_000467180.1;Parent=gene-AB11_RS03895;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AB11_RS03895;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 58643 59590 . - . ID=gene-AB11_RS03900;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AB11_RS03900;old_locus_tag=AB11_0459 NZ_JHDH01000091.1 Protein Homology CDS 58643 59590 . - 0 ID=cds-WP_001239441.1;Parent=gene-AB11_RS03900;Dbxref=GenBank:WP_001239441.1;Name=WP_001239441.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AB11_RS03900;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239441.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 60051 61526 . - . ID=gene-AB11_RS03905;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AB11_RS03905;old_locus_tag=AB11_0460 NZ_JHDH01000091.1 Protein Homology CDS 60051 61526 . - 0 ID=cds-WP_021570706.1;Parent=gene-AB11_RS03905;Dbxref=GenBank:WP_021570706.1;Name=WP_021570706.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AB11_RS03905;product=muropeptide MFS transporter AmpG;protein_id=WP_021570706.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 61570 62148 . - . ID=gene-AB11_RS03910;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AB11_RS03910;old_locus_tag=AB11_0461 NZ_JHDH01000091.1 Protein Homology CDS 61570 62148 . - 0 ID=cds-WP_001295326.1;Parent=gene-AB11_RS03910;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AB11_RS03910;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 62453 62770 . + . ID=gene-AB11_RS03915;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AB11_RS03915;old_locus_tag=AB11_0462 NZ_JHDH01000091.1 Protein Homology CDS 62453 62770 . + 0 ID=cds-WP_000973448.1;Parent=gene-AB11_RS03915;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AB11_RS03915;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 63114 64412 . + . ID=gene-AB11_RS03920;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AB11_RS03920;old_locus_tag=AB11_0464 NZ_JHDH01000091.1 Protein Homology CDS 63114 64412 . + 0 ID=cds-WP_001198386.1;Parent=gene-AB11_RS03920;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AB11_RS03920;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 64658 65281 . + . ID=gene-AB11_RS03925;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AB11_RS03925;old_locus_tag=AB11_0465 NZ_JHDH01000091.1 Protein Homology CDS 64658 65281 . + 0 ID=cds-WP_000122253.1;Parent=gene-AB11_RS03925;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AB11_RS03925;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 65407 66681 . + . ID=gene-AB11_RS03930;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AB11_RS03930;old_locus_tag=AB11_0466 NZ_JHDH01000091.1 Protein Homology CDS 65407 66681 . + 0 ID=cds-WP_000130305.1;Parent=gene-AB11_RS03930;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AB11_RS03930;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 66869 69223 . + . ID=gene-AB11_RS03935;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AB11_RS03935;old_locus_tag=AB11_0467 NZ_JHDH01000091.1 Protein Homology CDS 66869 69223 . + 0 ID=cds-WP_001295325.1;Parent=gene-AB11_RS03935;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AB11_RS03935;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 69414 69704 . + . ID=gene-AB11_RS03940;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AB11_RS03940;old_locus_tag=AB11_0468 NZ_JHDH01000091.1 Protein Homology CDS 69414 69704 . + 0 ID=cds-WP_254892905.1;Parent=gene-AB11_RS03940;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=AB11_RS03940;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 69896 71767 . + . ID=gene-AB11_RS03945;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AB11_RS03945;old_locus_tag=AB11_0469 NZ_JHDH01000091.1 Protein Homology CDS 69896 71767 . + 0 ID=cds-WP_000969372.1;Parent=gene-AB11_RS03945;Dbxref=GenBank:WP_000969372.1;Name=WP_000969372.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AB11_RS03945;product=peptidylprolyl isomerase;protein_id=WP_000969372.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 71918 72289 . + . ID=gene-AB11_RS03950;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AB11_RS03950;old_locus_tag=AB11_0470 NZ_JHDH01000091.1 Protein Homology CDS 71918 72289 . + 0 ID=cds-WP_000680312.1;Parent=gene-AB11_RS03950;Dbxref=GenBank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AB11_RS03950;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680312.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 72383 72781 . + . ID=gene-AB11_RS03955;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AB11_RS03955;old_locus_tag=AB11_0471 NZ_JHDH01000091.1 Protein Homology CDS 72383 72781 . + 0 ID=cds-WP_001194534.1;Parent=gene-AB11_RS03955;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AB11_RS03955;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 72833 73528 . - . ID=gene-AB11_RS03960;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AB11_RS03960;old_locus_tag=AB11_0472 NZ_JHDH01000091.1 Protein Homology CDS 72833 73528 . - 0 ID=cds-WP_000817220.1;Parent=gene-AB11_RS03960;Dbxref=GenBank:WP_000817220.1;Name=WP_000817220.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414978.1;locus_tag=AB11_RS03960;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817220.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 73593 75293 . - . ID=gene-AB11_RS03965;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AB11_RS03965;old_locus_tag=AB11_0473 NZ_JHDH01000091.1 Protein Homology CDS 73593 75293 . - 0 ID=cds-WP_001238234.1;Parent=gene-AB11_RS03965;Dbxref=GenBank:WP_001238234.1;Name=WP_001238234.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414979.1;locus_tag=AB11_RS03965;product=SgrR family transcriptional regulator;protein_id=WP_001238234.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 75393 76211 . + . ID=gene-AB11_RS03970;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AB11_RS03970;old_locus_tag=AB11_0474 NZ_JHDH01000091.1 Protein Homology CDS 75393 76211 . + 0 ID=cds-WP_001336137.1;Parent=gene-AB11_RS03970;Dbxref=GenBank:WP_001336137.1;Name=WP_001336137.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AB11_RS03970;product=HMP-PP phosphatase;protein_id=WP_001336137.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 76364 76822 . + . ID=gene-AB11_RS03975;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AB11_RS03975;old_locus_tag=AB11_0475 NZ_JHDH01000091.1 Protein Homology CDS 76364 76822 . + 0 ID=cds-WP_000884589.1;Parent=gene-AB11_RS03975;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AB11_RS03975;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 76852 78624 . + . ID=gene-AB11_RS03980;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AB11_RS03980;old_locus_tag=AB11_0476 NZ_JHDH01000091.1 Protein Homology CDS 76852 78624 . + 0 ID=cds-WP_001235649.1;Parent=gene-AB11_RS03980;Dbxref=GenBank:WP_001235649.1;Name=WP_001235649.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414982.1;locus_tag=AB11_RS03980;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235649.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 78617 80398 . + . ID=gene-AB11_RS03985;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AB11_RS03985;old_locus_tag=AB11_0477 NZ_JHDH01000091.1 Protein Homology CDS 78617 80398 . + 0 ID=cds-WP_001256201.1;Parent=gene-AB11_RS03985;Dbxref=GenBank:WP_001256201.1;Name=WP_001256201.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AB11_RS03985;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256201.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 80579 80917 . + . ID=gene-AB11_RS03990;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AB11_RS03990;old_locus_tag=AB11_0479 NZ_JHDH01000091.1 Protein Homology CDS 80579 80917 . + 0 ID=cds-WP_000780338.1;Parent=gene-AB11_RS03990;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AB11_RS03990;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 80947 82233 . + . ID=gene-AB11_RS03995;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AB11_RS03995;old_locus_tag=AB11_0480 NZ_JHDH01000091.1 Protein Homology CDS 80947 82233 . + 0 ID=cds-WP_000685029.1;Parent=gene-AB11_RS03995;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AB11_RS03995;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 82282 83142 . - . ID=gene-AB11_RS04000;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AB11_RS04000;old_locus_tag=AB11_0481 NZ_JHDH01000091.1 Protein Homology CDS 82282 83142 . - 0 ID=cds-WP_000075876.1;Parent=gene-AB11_RS04000;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AB11_RS04000;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 83360 83932 . + . ID=gene-AB11_RS04005;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AB11_RS04005;old_locus_tag=AB11_0483 NZ_JHDH01000091.1 Protein Homology CDS 83360 83932 . + 0 ID=cds-WP_000779831.1;Parent=gene-AB11_RS04005;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AB11_RS04005;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 83963 84274 . - . ID=gene-AB11_RS04010;Name=AB11_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04010;old_locus_tag=AB11_0484 NZ_JHDH01000091.1 Protein Homology CDS 83963 84274 . - 0 ID=cds-WP_000409911.1;Parent=gene-AB11_RS04010;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AB11_RS04010;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 84437 84533 . + . ID=gene-AB11_RS04015;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AB11_RS04015 NZ_JHDH01000091.1 cmsearch SRP_RNA 84437 84533 . + . ID=rna-AB11_RS04015;Parent=gene-AB11_RS04015;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS04015;product=signal recognition particle sRNA small type NZ_JHDH01000091.1 cmsearch exon 84437 84533 . + . ID=exon-AB11_RS04015-1;Parent=rna-AB11_RS04015;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS04015;product=signal recognition particle sRNA small type NZ_JHDH01000091.1 RefSeq gene 84653 85006 . + . ID=gene-AB11_RS04020;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AB11_RS04020;old_locus_tag=AB11_0485 NZ_JHDH01000091.1 Protein Homology CDS 84653 85006 . + 0 ID=cds-WP_000878140.1;Parent=gene-AB11_RS04020;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AB11_RS04020;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 85048 86598 . - . ID=gene-AB11_RS04025;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AB11_RS04025;old_locus_tag=AB11_0486 NZ_JHDH01000091.1 Protein Homology CDS 85048 86598 . - 0 ID=cds-WP_001310610.1;Parent=gene-AB11_RS04025;Dbxref=GenBank:WP_001310610.1;Name=WP_001310610.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414990.2;locus_tag=AB11_RS04025;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001310610.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 86762 87232 . - . ID=gene-AB11_RS04030;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AB11_RS04030;old_locus_tag=AB11_0487 NZ_JHDH01000091.1 Protein Homology CDS 86762 87232 . - 0 ID=cds-WP_000136192.1;Parent=gene-AB11_RS04030;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AB11_RS04030;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 87348 87899 . - . ID=gene-AB11_RS04035;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AB11_RS04035;old_locus_tag=AB11_0488 NZ_JHDH01000091.1 Protein Homology CDS 87348 87899 . - 0 ID=cds-WP_032223002.1;Parent=gene-AB11_RS04035;Dbxref=GenBank:WP_032223002.1;Name=WP_032223002.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AB11_RS04035;product=maltose O-acetyltransferase;protein_id=WP_032223002.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 88071 88289 . - . ID=gene-AB11_RS04040;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB11_RS04040;old_locus_tag=AB11_0489 NZ_JHDH01000091.1 Protein Homology CDS 88071 88289 . - 0 ID=cds-WP_001291435.1;Parent=gene-AB11_RS04040;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AB11_RS04040;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 88315 88689 . - . ID=gene-AB11_RS04045;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AB11_RS04045;old_locus_tag=AB11_0490 NZ_JHDH01000091.1 Protein Homology CDS 88315 88689 . - 0 ID=cds-WP_000344800.1;Parent=gene-AB11_RS04045;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AB11_RS04045;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 89235 92384 . - . ID=gene-AB11_RS04050;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AB11_RS04050;old_locus_tag=AB11_0491 NZ_JHDH01000091.1 Protein Homology CDS 89235 92384 . - 0 ID=cds-WP_001132469.1;Parent=gene-AB11_RS04050;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AB11_RS04050;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 92407 93600 . - . ID=gene-AB11_RS04055;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AB11_RS04055;old_locus_tag=AB11_0492 NZ_JHDH01000091.1 Protein Homology CDS 92407 93600 . - 0 ID=cds-WP_024167489.1;Parent=gene-AB11_RS04055;Dbxref=GenBank:WP_024167489.1;Name=WP_024167489.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AB11_RS04055;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_024167489.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 93742 94389 . + . ID=gene-AB11_RS04060;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AB11_RS04060;old_locus_tag=AB11_0493 NZ_JHDH01000091.1 Protein Homology CDS 93742 94389 . + 0 ID=cds-WP_000101737.1;Parent=gene-AB11_RS04060;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AB11_RS04060;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 94517 97879 . + . ID=gene-AB11_RS04065;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AB11_RS04065;old_locus_tag=AB11_0494 NZ_JHDH01000091.1 Protein Homology CDS 94517 97879 . + 0 ID=cds-WP_000177732.1;Parent=gene-AB11_RS04065;Dbxref=GenBank:WP_000177732.1;Name=WP_000177732.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=AB11_RS04065;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 98091 98252 . - . ID=gene-AB11_RS04070;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AB11_RS04070;old_locus_tag=AB11_0495 NZ_JHDH01000091.1 Protein Homology CDS 98091 98252 . - 0 ID=cds-WP_000051153.1;Parent=gene-AB11_RS04070;Dbxref=GenBank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AB11_RS04070;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051153.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 98266 98793 . - . ID=gene-AB11_RS04075;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AB11_RS04075;old_locus_tag=AB11_0496 NZ_JHDH01000091.1 Protein Homology CDS 98266 98793 . - 0 ID=cds-WP_000844874.1;Parent=gene-AB11_RS04075;Dbxref=GenBank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AB11_RS04075;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 98863 99240 . + . ID=gene-AB11_RS04080;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AB11_RS04080;old_locus_tag=AB11_0497 NZ_JHDH01000091.1 Protein Homology CDS 98863 99240 . + 0 ID=cds-WP_001188905.1;Parent=gene-AB11_RS04080;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AB11_RS04080;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 99393 99944 . + . ID=gene-AB11_RS04085;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AB11_RS04085;old_locus_tag=AB11_0498 NZ_JHDH01000091.1 Protein Homology CDS 99393 99944 . + 0 ID=cds-WP_000127356.1;Parent=gene-AB11_RS04085;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AB11_RS04085;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 100073 102004 . + . ID=gene-AB11_RS04090;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AB11_RS04090;old_locus_tag=AB11_0499 NZ_JHDH01000091.1 Protein Homology CDS 100073 102004 . + 0 ID=cds-WP_000122013.1;Parent=gene-AB11_RS04090;Dbxref=GenBank:WP_000122013.1;Name=WP_000122013.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=AB11_RS04090;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122013.1;transl_table=11 NZ_JHDH01000091.1 cmsearch sequence_feature 101337 101401 . + . ID=id-AB11_RS04090;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS04090 NZ_JHDH01000091.1 RefSeq gene 102057 102386 . + . ID=gene-AB11_RS04095;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AB11_RS04095;old_locus_tag=AB11_0500 NZ_JHDH01000091.1 Protein Homology CDS 102057 102386 . + 0 ID=cds-WP_000467098.1;Parent=gene-AB11_RS04095;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AB11_RS04095;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 102386 102991 . + . ID=gene-AB11_RS04100;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AB11_RS04100;old_locus_tag=AB11_0501 NZ_JHDH01000091.1 Protein Homology CDS 102386 102991 . + 0 ID=cds-WP_001195025.1;Parent=gene-AB11_RS04100;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AB11_RS04100;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 103101 104975 . + . ID=gene-AB11_RS04105;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AB11_RS04105;old_locus_tag=AB11_0502 NZ_JHDH01000091.1 Protein Homology CDS 103101 104975 . + 0 ID=cds-WP_000678201.1;Parent=gene-AB11_RS04105;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AB11_RS04105;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 105156 105800 . + . ID=gene-AB11_RS04110;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AB11_RS04110;old_locus_tag=AB11_0503 NZ_JHDH01000091.1 Protein Homology CDS 105156 105800 . + 0 ID=cds-WP_001220233.1;Parent=gene-AB11_RS04110;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AB11_RS04110;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 106036 106998 . + . ID=gene-AB11_RS04115;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AB11_RS04115;old_locus_tag=AB11_0504 NZ_JHDH01000091.1 Protein Homology CDS 106036 106998 . + 0 ID=cds-WP_001250103.1;Parent=gene-AB11_RS04115;Dbxref=GenBank:WP_001250103.1;Name=WP_001250103.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AB11_RS04115;product=ferrochelatase;protein_id=WP_001250103.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 106995 107954 . - . ID=gene-AB11_RS04120;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AB11_RS04120;old_locus_tag=AB11_0505 NZ_JHDH01000091.1 Protein Homology CDS 106995 107954 . - 0 ID=cds-WP_000801813.1;Parent=gene-AB11_RS04120;Dbxref=GenBank:WP_000801813.1;Name=WP_000801813.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AB11_RS04120;product=acetyl esterase;protein_id=WP_000801813.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 108106 109410 . + . ID=gene-AB11_RS04125;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AB11_RS04125;old_locus_tag=AB11_0506 NZ_JHDH01000091.1 Protein Homology CDS 108106 109410 . + 0 ID=cds-WP_000671574.1;Parent=gene-AB11_RS04125;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AB11_RS04125;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 109543 111219 . - . ID=gene-AB11_RS04130;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AB11_RS04130;old_locus_tag=AB11_0507 NZ_JHDH01000091.1 Protein Homology CDS 109543 111219 . - 0 ID=cds-WP_000546237.1;Parent=gene-AB11_RS04130;Dbxref=GenBank:WP_000546237.1;Name=WP_000546237.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415011.1;locus_tag=AB11_RS04130;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546237.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 111457 112677 . - . ID=gene-AB11_RS04135;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AB11_RS04135;old_locus_tag=AB11_0508 NZ_JHDH01000091.1 Protein Homology CDS 111457 112677 . - 0 ID=cds-WP_001251608.1;Parent=gene-AB11_RS04135;Dbxref=GenBank:WP_001251608.1;Name=WP_001251608.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AB11_RS04135;product=fosmidomycin MFS transporter;protein_id=WP_001251608.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 112895 114547 . + . ID=gene-AB11_RS04140;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AB11_RS04140;old_locus_tag=AB11_0509 NZ_JHDH01000091.1 Protein Homology CDS 112895 114547 . + 0 ID=cds-WP_000771748.1;Parent=gene-AB11_RS04140;Dbxref=GenBank:WP_000771748.1;Name=WP_000771748.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AB11_RS04140;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_000771748.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 114584 115063 . - . ID=gene-AB11_RS04145;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AB11_RS04145;old_locus_tag=AB11_0510 NZ_JHDH01000091.1 Protein Homology CDS 114584 115063 . - 0 ID=cds-WP_000186631.1;Parent=gene-AB11_RS04145;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AB11_RS04145;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 115267 116061 . - . ID=gene-AB11_RS04150;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AB11_RS04150;old_locus_tag=AB11_0511 NZ_JHDH01000091.1 Protein Homology CDS 115267 116061 . - 0 ID=cds-WP_000365173.1;Parent=gene-AB11_RS04150;Dbxref=GenBank:WP_000365173.1;Name=WP_000365173.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AB11_RS04150;product=TraB/GumN family protein;protein_id=WP_000365173.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 116199 116540 . + . ID=gene-AB11_RS04155;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AB11_RS04155;old_locus_tag=AB11_0512 NZ_JHDH01000091.1 Protein Homology CDS 116199 116540 . + 0 ID=cds-WP_000806442.1;Parent=gene-AB11_RS04155;Dbxref=GenBank:WP_000806442.1;Name=WP_000806442.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AB11_RS04155;product=HigA family addiction module antitoxin;protein_id=WP_000806442.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 116856 119360 . - . ID=gene-AB11_RS04160;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AB11_RS04160;old_locus_tag=AB11_0513 NZ_JHDH01000091.1 Protein Homology CDS 116856 119360 . - 0 ID=cds-WP_000083955.1;Parent=gene-AB11_RS04160;Dbxref=GenBank:WP_000083955.1;Name=WP_000083955.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AB11_RS04160;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083955.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 119622 120554 . + . ID=gene-AB11_RS04165;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AB11_RS04165;old_locus_tag=AB11_0514 NZ_JHDH01000091.1 Protein Homology CDS 119622 120554 . + 0 ID=cds-WP_000883034.1;Parent=gene-AB11_RS04165;Dbxref=GenBank:WP_000883034.1;Name=WP_000883034.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=AB11_RS04165;product=glutaminase A;protein_id=WP_000883034.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 120557 121849 . + . ID=gene-AB11_RS04170;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AB11_RS04170;old_locus_tag=AB11_0515 NZ_JHDH01000091.1 Protein Homology CDS 120557 121849 . + 0 ID=cds-WP_000982172.1;Parent=gene-AB11_RS04170;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AB11_RS04170;product=APC family permease;protein_id=WP_000982172.1;transl_table=11 NZ_JHDH01000091.1 RefSeq pseudogene 121880 121977 . + . ID=gene-AB11_RS25495;Name=AB11_RS25495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25495;partial=true;pseudo=true;start_range=.,121880 NZ_JHDH01000091.1 Protein Homology CDS 121880 121977 . + 0 ID=cds-AB11_RS25495;Parent=gene-AB11_RS25495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AB11_RS25495;partial=true;product=hypothetical protein;pseudo=true;start_range=.,121880;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 121974 122381 . + . ID=gene-AB11_RS04175;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AB11_RS04175;old_locus_tag=AB11_0516 NZ_JHDH01000091.1 Protein Homology CDS 121974 122381 . + 0 ID=cds-WP_001026747.1;Parent=gene-AB11_RS04175;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AB11_RS04175;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 122382 122840 . - . ID=gene-AB11_RS04180;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AB11_RS04180;old_locus_tag=AB11_0517 NZ_JHDH01000091.1 Protein Homology CDS 122382 122840 . - 0 ID=cds-WP_000970323.1;Parent=gene-AB11_RS04180;Dbxref=GenBank:WP_000970323.1;Name=WP_000970323.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AB11_RS04180;product=NfeD family protein;protein_id=WP_000970323.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 122837 123754 . - . ID=gene-AB11_RS04185;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AB11_RS04185;old_locus_tag=AB11_0518 NZ_JHDH01000091.1 Protein Homology CDS 122837 123754 . - 0 ID=cds-WP_000904502.1;Parent=gene-AB11_RS04185;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AB11_RS04185;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 123900 124577 . + . ID=gene-AB11_RS04190;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AB11_RS04190;old_locus_tag=AB11_0519 NZ_JHDH01000091.1 Protein Homology CDS 123900 124577 . + 0 ID=cds-WP_001157540.1;Parent=gene-AB11_RS04190;Dbxref=GenBank:WP_001157540.1;Name=WP_001157540.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AB11_RS04190;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157540.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 124564 125343 . + . ID=gene-AB11_RS04195;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AB11_RS04195;old_locus_tag=AB11_0520 NZ_JHDH01000091.1 Protein Homology CDS 124564 125343 . + 0 ID=cds-WP_001295323.1;Parent=gene-AB11_RS04195;Dbxref=GenBank:WP_001295323.1;Name=WP_001295323.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AB11_RS04195;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001295323.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 125406 126260 . - . ID=gene-AB11_RS04200;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AB11_RS04200;old_locus_tag=AB11_0521 NZ_JHDH01000091.1 Protein Homology CDS 125406 126260 . - 0 ID=cds-WP_001300573.1;Parent=gene-AB11_RS04200;Dbxref=GenBank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AB11_RS04200;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 126321 127130 . - . ID=gene-AB11_RS04205;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AB11_RS04205;old_locus_tag=AB11_0522 NZ_JHDH01000091.1 Protein Homology CDS 126321 127130 . - 0 ID=cds-WP_000148959.1;Parent=gene-AB11_RS04205;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AB11_RS04205;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 127120 127743 . - . ID=gene-AB11_RS04210;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AB11_RS04210;old_locus_tag=AB11_0523 NZ_JHDH01000091.1 Protein Homology CDS 127120 127743 . - 0 ID=cds-WP_001295836.1;Parent=gene-AB11_RS04210;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AB11_RS04210;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 127714 128400 . + . ID=gene-AB11_RS04215;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AB11_RS04215;old_locus_tag=AB11_0524 NZ_JHDH01000091.1 Protein Homology CDS 127714 128400 . + 0 ID=cds-WP_001110573.1;Parent=gene-AB11_RS04215;Dbxref=GenBank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AB11_RS04215;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110573.1;transl_table=11 NZ_JHDH01000091.1 RefSeq gene 128397 130811 . + . ID=gene-AB11_RS04220;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AB11_RS04220;old_locus_tag=AB11_0525 NZ_JHDH01000091.1 Protein Homology CDS 128397 130811 . + 0 ID=cds-WP_000561872.1;Parent=gene-AB11_RS04220;Dbxref=GenBank:WP_000561872.1;Name=WP_000561872.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AB11_RS04220;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561872.1;transl_table=11 NZ_JHDH01000091.1 RefSeq pseudogene 131242 132522 . + . ID=gene-AB11_RS04225;Name=rhsD;end_range=132522,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AB11_RS04225;old_locus_tag=AB11_0526;partial=true;pseudo=true NZ_JHDH01000091.1 Protein Homology CDS 131242 132522 . + 0 ID=cds-AB11_RS04225;Parent=gene-AB11_RS04225;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=132522,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AB11_RS04225;partial=true;product=rhs element protein RhsD;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000092.1 1 49900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000092.1 RefSeq region 1 49900 . + . ID=NZ_JHDH01000092.1:1..49900;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000092.1 RefSeq pseudogene 19 438 . + . ID=gene-AB11_RS26015;Name=tssI;end_range=438,.;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=AB11_RS26015;partial=true;pseudo=true NZ_JHDH01000092.1 Protein Homology CDS 19 438 . + 0 ID=cds-AB11_RS26015;Parent=gene-AB11_RS26015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103;end_range=438,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03361.1;locus_tag=AB11_RS26015;partial=true;product=type VI secretion system tip protein TssI/VgrG;pseudo=true;transl_table=11 NZ_JHDH01000092.1 RefSeq pseudogene 493 3923 . + . ID=gene-AB11_RS25180;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AB11_RS25180;partial=true;pseudo=true;start_range=.,493 NZ_JHDH01000092.1 Protein Homology CDS 493 3923 . + 0 ID=cds-AB11_RS25180;Parent=gene-AB11_RS25180;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AB11_RS25180;partial=true;product=rhs element protein RhsD;pseudo=true;start_range=.,493;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 3963 4331 . + . ID=gene-AB11_RS04245;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;locus_tag=AB11_RS04245;old_locus_tag=AB11_0530 NZ_JHDH01000092.1 Protein Homology CDS 3963 4331 . + 0 ID=cds-WP_000877768.1;Parent=gene-AB11_RS04245;Dbxref=GenBank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;gene=ybbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AB11_RS04245;product=YbbC/YhhH family protein;protein_id=WP_000877768.1;transl_table=11 NZ_JHDH01000092.1 RefSeq pseudogene 4334 5041 . + . ID=gene-AB11_RS04250;Name=AB11_RS04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS04250;old_locus_tag=AB11_0531;partial=true;pseudo=true;start_range=.,4334 NZ_JHDH01000092.1 Protein Homology CDS 4334 5041 . + 0 ID=cds-AB11_RS04250;Parent=gene-AB11_RS04250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AB11_RS04250;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,4334;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 5022 5282 . + . ID=gene-AB11_RS04255;Name=AB11_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04255 NZ_JHDH01000092.1 Protein Homology CDS 5022 5282 . + 0 ID=cds-WP_001529777.1;Parent=gene-AB11_RS04255;Dbxref=GenBank:WP_001529777.1;Name=WP_001529777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308588.1;locus_tag=AB11_RS04255;product=hypothetical protein;protein_id=WP_001529777.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 5339 5512 . + . ID=gene-AB11_RS04260;Name=AB11_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04260 NZ_JHDH01000092.1 Protein Homology CDS 5339 5512 . + 0 ID=cds-WP_001297301.1;Parent=gene-AB11_RS04260;Dbxref=GenBank:WP_001297301.1;Name=WP_001297301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297301.1;locus_tag=AB11_RS04260;product=hypothetical protein;protein_id=WP_001297301.1;transl_table=11 NZ_JHDH01000092.1 RefSeq pseudogene 5879 5974 . + . ID=gene-AB11_RS26020;Name=AB11_RS26020;end_range=5974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26020;partial=true;pseudo=true NZ_JHDH01000092.1 Protein Homology CDS 5879 5974 . + 0 ID=cds-AB11_RS26020;Parent=gene-AB11_RS26020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AB11_RS26020;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000092.1 RefSeq pseudogene 6033 6398 . - . ID=gene-AB11_RS04265;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;locus_tag=AB11_RS04265;old_locus_tag=AB11_0532;partial=true;pseudo=true;start_range=.,6033 NZ_JHDH01000092.1 Protein Homology CDS 6033 6398 . - 0 ID=cds-AB11_RS04265;Parent=gene-AB11_RS04265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ylbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AB11_RS04265;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,6033;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 6514 7608 . - . ID=gene-AB11_RS04270;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AB11_RS04270;old_locus_tag=AB11_0533 NZ_JHDH01000092.1 Protein Homology CDS 6514 7608 . - 0 ID=cds-WP_001157938.1;Parent=gene-AB11_RS04270;Dbxref=GenBank:WP_001157938.1;Name=WP_001157938.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415036.1;locus_tag=AB11_RS04270;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157938.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 7677 8603 . - . ID=gene-AB11_RS04275;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AB11_RS04275;old_locus_tag=AB11_0534 NZ_JHDH01000092.1 Protein Homology CDS 7677 8603 . - 0 ID=cds-WP_000460145.1;Parent=gene-AB11_RS04275;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AB11_RS04275;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 8833 9315 . + . ID=gene-AB11_RS04280;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AB11_RS04280;old_locus_tag=AB11_0535 NZ_JHDH01000092.1 Protein Homology CDS 8833 9315 . + 0 ID=cds-WP_000776388.1;Parent=gene-AB11_RS04280;Dbxref=GenBank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AB11_RS04280;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 9393 10208 . + . ID=gene-AB11_RS04285;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AB11_RS04285;old_locus_tag=AB11_0536 NZ_JHDH01000092.1 Protein Homology CDS 9393 10208 . + 0 ID=cds-WP_000141275.1;Parent=gene-AB11_RS04285;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AB11_RS04285;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 10298 12079 . + . ID=gene-AB11_RS04290;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AB11_RS04290;old_locus_tag=AB11_0537 NZ_JHDH01000092.1 Protein Homology CDS 10298 12079 . + 0 ID=cds-WP_001096881.1;Parent=gene-AB11_RS04290;Dbxref=GenBank:WP_001096881.1;Name=WP_001096881.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AB11_RS04290;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 12092 12868 . + . ID=gene-AB11_RS04295;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AB11_RS04295;old_locus_tag=AB11_0538 NZ_JHDH01000092.1 Protein Homology CDS 12092 12868 . + 0 ID=cds-WP_001736945.1;Parent=gene-AB11_RS04295;Dbxref=GenBank:WP_001736945.1;Name=WP_001736945.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415041.1;locus_tag=AB11_RS04295;product=hydroxypyruvate isomerase;protein_id=WP_001736945.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 12968 13846 . + . ID=gene-AB11_RS04300;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AB11_RS04300;old_locus_tag=AB11_0539 NZ_JHDH01000092.1 Protein Homology CDS 12968 13846 . + 0 ID=cds-WP_000765839.1;Parent=gene-AB11_RS04300;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AB11_RS04300;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 14015 15469 . + . ID=gene-AB11_RS04305;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AB11_RS04305;old_locus_tag=AB11_0540 NZ_JHDH01000092.1 Protein Homology CDS 14015 15469 . + 0 ID=cds-WP_021570710.1;Parent=gene-AB11_RS04305;Dbxref=GenBank:WP_021570710.1;Name=WP_021570710.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AB11_RS04305;product=allantoin transporter;protein_id=WP_021570710.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 15529 16890 . + . ID=gene-AB11_RS04310;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AB11_RS04310;old_locus_tag=AB11_0541 NZ_JHDH01000092.1 Protein Homology CDS 15529 16890 . + 0 ID=cds-WP_000006900.1;Parent=gene-AB11_RS04310;Dbxref=GenBank:WP_000006900.1;Name=WP_000006900.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AB11_RS04310;product=allantoinase AllB;protein_id=WP_000006900.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 16947 18248 . + . ID=gene-AB11_RS04315;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AB11_RS04315;old_locus_tag=AB11_0542 NZ_JHDH01000092.1 Protein Homology CDS 16947 18248 . + 0 ID=cds-WP_001302767.1;Parent=gene-AB11_RS04315;Dbxref=GenBank:WP_001302767.1;Name=WP_001302767.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AB11_RS04315;product=uracil/xanthine transporter;protein_id=WP_001302767.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 18270 19415 . + . ID=gene-AB11_RS04320;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AB11_RS04320;old_locus_tag=AB11_0543 NZ_JHDH01000092.1 Protein Homology CDS 18270 19415 . + 0 ID=cds-WP_001333621.1;Parent=gene-AB11_RS04320;Dbxref=GenBank:WP_001333621.1;Name=WP_001333621.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AB11_RS04320;product=glycerate 3-kinase;protein_id=WP_001333621.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 19643 20428 . - . ID=gene-AB11_RS04325;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AB11_RS04325;old_locus_tag=AB11_0544 NZ_JHDH01000092.1 Protein Homology CDS 19643 20428 . - 0 ID=cds-WP_000540997.1;Parent=gene-AB11_RS04325;Dbxref=GenBank:WP_000540997.1;Name=WP_000540997.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415048.1;locus_tag=AB11_RS04325;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540997.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 20439 21674 . - . ID=gene-AB11_RS04330;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AB11_RS04330;old_locus_tag=AB11_0545 NZ_JHDH01000092.1 Protein Homology CDS 20439 21674 . - 0 ID=cds-WP_001310618.1;Parent=gene-AB11_RS04330;Dbxref=GenBank:WP_001310618.1;Name=WP_001310618.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AB11_RS04330;product=allantoate deiminase;protein_id=WP_001310618.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 21696 22745 . - . ID=gene-AB11_RS04335;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AB11_RS04335;old_locus_tag=AB11_0546 NZ_JHDH01000092.1 Protein Homology CDS 21696 22745 . - 0 ID=cds-WP_000703900.1;Parent=gene-AB11_RS04335;Dbxref=GenBank:WP_000703900.1;Name=WP_000703900.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415050.1;locus_tag=AB11_RS04335;product=ureidoglycolate dehydrogenase;protein_id=WP_000703900.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 23062 24729 . + . ID=gene-AB11_RS04340;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB11_RS04340;old_locus_tag=AB11_0547 NZ_JHDH01000092.1 Protein Homology CDS 23062 24729 . + 0 ID=cds-WP_000580840.1;Parent=gene-AB11_RS04340;Dbxref=GenBank:WP_000580840.1;Name=WP_000580840.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AB11_RS04340;product=acyl-CoA synthetase FdrA;protein_id=WP_000580840.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 24739 25998 . + . ID=gene-AB11_RS04345;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AB11_RS04345;old_locus_tag=AB11_0548 NZ_JHDH01000092.1 Protein Homology CDS 24739 25998 . + 0 ID=cds-WP_000495365.1;Parent=gene-AB11_RS04345;Dbxref=GenBank:WP_000495365.1;Name=WP_000495365.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AB11_RS04345;product=YlbE family protein;protein_id=WP_000495365.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 26009 26824 . + . ID=gene-AB11_RS04350;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AB11_RS04350;old_locus_tag=AB11_0549 NZ_JHDH01000092.1 Protein Homology CDS 26009 26824 . + 0 ID=cds-WP_001469952.1;Parent=gene-AB11_RS04350;Dbxref=GenBank:WP_001469952.1;Name=WP_001469952.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AB11_RS04350;product=DUF2877 domain-containing protein;protein_id=WP_001469952.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 26821 27714 . + . ID=gene-AB11_RS04355;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AB11_RS04355;old_locus_tag=AB11_0550 NZ_JHDH01000092.1 Protein Homology CDS 26821 27714 . + 0 ID=cds-WP_000855388.1;Parent=gene-AB11_RS04355;Dbxref=GenBank:WP_000855388.1;Name=WP_000855388.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AB11_RS04355;product=carbamate kinase;protein_id=WP_000855388.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 27909 28976 . - . ID=gene-AB11_RS04360;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AB11_RS04360;old_locus_tag=AB11_0551 NZ_JHDH01000092.1 Protein Homology CDS 27909 28976 . - 0 ID=cds-WP_000815566.1;Parent=gene-AB11_RS04360;Dbxref=GenBank:WP_000815566.1;Name=WP_000815566.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AB11_RS04360;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815566.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 28973 29482 . - . ID=gene-AB11_RS04365;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AB11_RS04365;old_locus_tag=AB11_0552 NZ_JHDH01000092.1 Protein Homology CDS 28973 29482 . - 0 ID=cds-WP_001351650.1;Parent=gene-AB11_RS04365;Dbxref=GenBank:WP_001351650.1;Name=WP_001351650.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AB11_RS04365;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001351650.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 29600 30322 . - . ID=gene-AB11_RS04370;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AB11_RS04370;old_locus_tag=AB11_0553 NZ_JHDH01000092.1 Protein Homology CDS 29600 30322 . - 0 ID=cds-WP_000212252.1;Parent=gene-AB11_RS04370;Dbxref=GenBank:WP_000212252.1;Name=WP_000212252.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=AB11_RS04370;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212252.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 30325 30819 . - . ID=gene-AB11_RS04375;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AB11_RS04375;old_locus_tag=AB11_0554 NZ_JHDH01000092.1 Protein Homology CDS 30325 30819 . - 0 ID=cds-WP_000255997.1;Parent=gene-AB11_RS04375;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AB11_RS04375;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 30993 32378 . + . ID=gene-AB11_RS04380;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AB11_RS04380;old_locus_tag=AB11_0555 NZ_JHDH01000092.1 Protein Homology CDS 30993 32378 . + 0 ID=cds-WP_000912345.1;Parent=gene-AB11_RS04380;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AB11_RS04380;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 32414 32935 . - . ID=gene-AB11_RS04385;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AB11_RS04385;old_locus_tag=AB11_0556 NZ_JHDH01000092.1 Protein Homology CDS 32414 32935 . - 0 ID=cds-WP_001143558.1;Parent=gene-AB11_RS04385;Dbxref=GenBank:WP_001143558.1;Name=WP_001143558.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AB11_RS04385;product=metal-dependent hydrolase;protein_id=WP_001143558.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 33043 33255 . - . ID=gene-AB11_RS04390;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AB11_RS04390;old_locus_tag=AB11_0557 NZ_JHDH01000092.1 Protein Homology CDS 33043 33255 . - 0 ID=cds-WP_000190288.1;Parent=gene-AB11_RS04390;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AB11_RS04390;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 33257 34123 . - . ID=gene-AB11_RS04395;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AB11_RS04395;old_locus_tag=AB11_0558 NZ_JHDH01000092.1 Protein Homology CDS 33257 34123 . - 0 ID=cds-WP_000729160.1;Parent=gene-AB11_RS04395;Dbxref=GenBank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=AB11_RS04395;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 34594 35136 . + . ID=gene-AB11_RS04400;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB11_RS04400;old_locus_tag=AB11_0559 NZ_JHDH01000092.1 Protein Homology CDS 34594 35136 . + 0 ID=cds-WP_000776555.1;Parent=gene-AB11_RS04400;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AB11_RS04400;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 35356 36048 . + . ID=gene-AB11_RS04405;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB11_RS04405;old_locus_tag=AB11_0561 NZ_JHDH01000092.1 Protein Homology CDS 35356 36048 . + 0 ID=cds-WP_000988365.1;Parent=gene-AB11_RS04405;Dbxref=GenBank:WP_000988365.1;Name=WP_000988365.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AB11_RS04405;product=type 1 fimbria chaperone FimC;protein_id=WP_000988365.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 36079 38688 . + . ID=gene-AB11_RS04410;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=protein_coding;locus_tag=AB11_RS04410;old_locus_tag=AB11_0562 NZ_JHDH01000092.1 Protein Homology CDS 36079 38688 . + 0 ID=cds-WP_032223016.1;Parent=gene-AB11_RS04410;Dbxref=GenBank:WP_032223016.1;Name=WP_032223016.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AB11_RS04410;product=fimbrial biogenesis usher protein;protein_id=WP_032223016.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 38730 39707 . + . ID=gene-AB11_RS04415;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB11_RS04415;old_locus_tag=AB11_0563 NZ_JHDH01000092.1 Protein Homology CDS 38730 39707 . + 0 ID=cds-WP_001301128.1;Parent=gene-AB11_RS04415;Dbxref=GenBank:WP_001301128.1;Name=WP_001301128.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122052.1;locus_tag=AB11_RS04415;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_001301128.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 39718 40233 . + . ID=gene-AB11_RS04420;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AB11_RS04420;old_locus_tag=AB11_0564 NZ_JHDH01000092.1 Protein Homology CDS 39718 40233 . + 0 ID=cds-WP_001255226.1;Parent=gene-AB11_RS04420;Dbxref=GenBank:WP_001255226.1;Name=WP_001255226.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AB11_RS04420;product=fimbria assembly protein;protein_id=WP_001255226.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 40236 40868 . - . ID=gene-AB11_RS04425;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AB11_RS04425;old_locus_tag=AB11_0565 NZ_JHDH01000092.1 Protein Homology CDS 40236 40868 . - 0 ID=cds-WP_000805422.1;Parent=gene-AB11_RS04425;Dbxref=GenBank:WP_000805422.1;Name=WP_000805422.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AB11_RS04425;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805422.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 41111 41187 . + . ID=gene-AB11_RS04430;Name=AB11_RS04430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04430;old_locus_tag=AB11_0566 NZ_JHDH01000092.1 tRNAscan-SE tRNA 41111 41187 . + . ID=rna-AB11_RS04430;Parent=gene-AB11_RS04430;anticodon=(pos:41145..41147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04430;product=tRNA-Arg NZ_JHDH01000092.1 tRNAscan-SE exon 41111 41187 . + . ID=exon-AB11_RS04430-1;Parent=rna-AB11_RS04430;anticodon=(pos:41145..41147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04430;product=tRNA-Arg NZ_JHDH01000092.1 RefSeq gene 41233 41994 . - . ID=gene-AB11_RS04435;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AB11_RS04435;old_locus_tag=AB11_0567 NZ_JHDH01000092.1 Protein Homology CDS 41233 41994 . - 0 ID=cds-WP_001177481.1;Parent=gene-AB11_RS04435;Dbxref=GenBank:WP_001177481.1;Name=WP_001177481.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AB11_RS04435;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177481.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 42177 43067 . - . ID=gene-AB11_RS04440;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AB11_RS04440;old_locus_tag=AB11_0568 NZ_JHDH01000092.1 Protein Homology CDS 42177 43067 . - 0 ID=cds-WP_001224575.1;Parent=gene-AB11_RS04440;Dbxref=GenBank:WP_001224575.1;Name=WP_001224575.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=AB11_RS04440;product=DUF4434 family protein;protein_id=WP_001224575.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 43068 46040 . - . ID=gene-AB11_RS04445;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AB11_RS04445;old_locus_tag=AB11_0569 NZ_JHDH01000092.1 Protein Homology CDS 43068 46040 . - 0 ID=cds-WP_000662353.1;Parent=gene-AB11_RS04445;Dbxref=GenBank:WP_000662353.1;Name=WP_000662353.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AB11_RS04445;product=bacteriophage adsorption protein NfrA;protein_id=WP_000662353.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 46027 48264 . - . ID=gene-AB11_RS04450;Name=nfrB;gbkey=Gene;gene=nfrB;gene_biotype=protein_coding;locus_tag=AB11_RS04450;old_locus_tag=AB11_0570 NZ_JHDH01000092.1 Protein Homology CDS 46027 48264 . - 0 ID=cds-WP_000383932.1;Parent=gene-AB11_RS04450;Dbxref=GenBank:WP_000383932.1;Name=WP_000383932.1;gbkey=CDS;gene=nfrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AB11_RS04450;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NfrB;protein_id=WP_000383932.1;transl_table=11 NZ_JHDH01000092.1 RefSeq gene 48535 49671 . - . ID=gene-AB11_RS04455;Name=AB11_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04455;old_locus_tag=AB11_0571 NZ_JHDH01000092.1 Protein Homology CDS 48535 49671 . - 0 ID=cds-WP_032223021.1;Parent=gene-AB11_RS04455;Dbxref=GenBank:WP_032223021.1;Name=WP_032223021.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS04455;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032223021.1;transl_table=11 NZ_JHDH01000092.1 RefSeq pseudogene 49812 49900 . - . ID=gene-AB11_RS25185;Name=AB11_RS25185;end_range=49900,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25185;partial=true;pseudo=true;start_range=.,49812 NZ_JHDH01000092.1 Protein Homology CDS 49812 49900 . - 2 ID=cds-AB11_RS25185;Parent=gene-AB11_RS25185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=49900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AB11_RS25185;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;start_range=.,49812;transl_table=11 ##sequence-region NZ_JHDH01000093.1 1 17399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000093.1 RefSeq region 1 17399 . + . ID=NZ_JHDH01000093.1:1..17399;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000093.1 RefSeq gene 1 1109 . - . ID=gene-AB11_RS04460;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AB11_RS04460;old_locus_tag=AB11_0572;partial=true;start_range=.,1 NZ_JHDH01000093.1 Protein Homology CDS 1 1109 . - 0 ID=cds-WP_032223028.1;Parent=gene-AB11_RS04460;Dbxref=GenBank:WP_032223028.1;Name=WP_032223028.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AB11_RS04460;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032223028.1;start_range=.,1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 1846 3294 . - . ID=gene-AB11_RS04465;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AB11_RS04465;old_locus_tag=AB11_0573 NZ_JHDH01000093.1 Protein Homology CDS 1846 3294 . - 0 ID=cds-WP_000253838.1;Parent=gene-AB11_RS04465;Dbxref=GenBank:WP_000253838.1;Name=WP_000253838.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AB11_RS04465;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253838.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 3284 3967 . - . ID=gene-AB11_RS04470;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AB11_RS04470;old_locus_tag=AB11_0574 NZ_JHDH01000093.1 Protein Homology CDS 3284 3967 . - 0 ID=cds-WP_000770953.1;Parent=gene-AB11_RS04470;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AB11_RS04470;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 4124 5497 . + . ID=gene-AB11_RS04475;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AB11_RS04475;old_locus_tag=AB11_0575 NZ_JHDH01000093.1 Protein Homology CDS 4124 5497 . + 0 ID=cds-WP_000074234.1;Parent=gene-AB11_RS04475;Dbxref=GenBank:WP_000074234.1;Name=WP_000074234.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415104.1;locus_tag=AB11_RS04475;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074234.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 5655 5987 . + . ID=gene-AB11_RS04480;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AB11_RS04480;old_locus_tag=AB11_0576 NZ_JHDH01000093.1 Protein Homology CDS 5655 5987 . + 0 ID=cds-WP_000709870.1;Parent=gene-AB11_RS04480;Dbxref=GenBank:WP_000709870.1;Name=WP_000709870.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AB11_RS04480;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709870.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 6003 7226 . + . ID=gene-AB11_RS04485;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AB11_RS04485;old_locus_tag=AB11_0577 NZ_JHDH01000093.1 Protein Homology CDS 6003 7226 . + 0 ID=cds-WP_000717157.1;Parent=gene-AB11_RS04485;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AB11_RS04485;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 7238 10381 . + . ID=gene-AB11_RS04490;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AB11_RS04490;old_locus_tag=AB11_0578 NZ_JHDH01000093.1 Protein Homology CDS 7238 10381 . + 0 ID=cds-WP_001468184.1;Parent=gene-AB11_RS04490;Dbxref=GenBank:WP_001468184.1;Name=WP_001468184.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AB11_RS04490;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_001468184.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 10483 11859 . + . ID=gene-AB11_RS04495;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AB11_RS04495;old_locus_tag=AB11_0579 NZ_JHDH01000093.1 Protein Homology CDS 10483 11859 . + 0 ID=cds-WP_000786320.1;Parent=gene-AB11_RS04495;Dbxref=GenBank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AB11_RS04495;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 11927 13174 . - . ID=gene-AB11_RS04500;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AB11_RS04500;old_locus_tag=AB11_0580 NZ_JHDH01000093.1 Protein Homology CDS 11927 13174 . - 0 ID=cds-WP_001153148.1;Parent=gene-AB11_RS04500;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AB11_RS04500;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 13282 13935 . - . ID=gene-AB11_RS04505;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AB11_RS04505;old_locus_tag=AB11_0581 NZ_JHDH01000093.1 Protein Homology CDS 13282 13935 . - 0 ID=cds-WP_000351480.1;Parent=gene-AB11_RS04505;Dbxref=GenBank:WP_000351480.1;Name=WP_000351480.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AB11_RS04505;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351480.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 14029 14397 . - . ID=gene-AB11_RS04510;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=AB11_RS04510;old_locus_tag=AB11_0582 NZ_JHDH01000093.1 Protein Homology CDS 14029 14397 . - 0 ID=cds-WP_000360951.1;Parent=gene-AB11_RS04510;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AB11_RS04510;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 14462 14710 . - . ID=gene-AB11_RS04515;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=AB11_RS04515;old_locus_tag=AB11_0583 NZ_JHDH01000093.1 Protein Homology CDS 14462 14710 . - 0 ID=cds-WP_000682524.1;Parent=gene-AB11_RS04515;Dbxref=GenBank:WP_000682524.1;Name=WP_000682524.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AB11_RS04515;product=DUF1158 domain-containing protein;protein_id=WP_000682524.1;transl_table=11 NZ_JHDH01000093.1 RefSeq gene 14776 15894 . - . ID=gene-AB11_RS04520;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=AB11_RS04520;old_locus_tag=AB11_0584 NZ_JHDH01000093.1 Protein Homology CDS 14776 15894 . - 0 ID=cds-WP_001130653.1;Parent=gene-AB11_RS04520;Dbxref=GenBank:WP_001130653.1;Name=WP_001130653.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AB11_RS04520;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130653.1;transl_table=11 NZ_JHDH01000093.1 RefSeq pseudogene 16110 16327 . - . ID=gene-AB11_RS26025;Name=AB11_RS26025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26025;pseudo=true NZ_JHDH01000093.1 Protein Homology CDS 16110 16327 . - 0 ID=cds-AB11_RS26025;Parent=gene-AB11_RS26025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304813.1;locus_tag=AB11_RS26025;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000093.1 RefSeq pseudogene 16326 17399 . + . ID=gene-AB11_RS04525;Name=AB11_RS04525;end_range=17399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS04525;partial=true;pseudo=true NZ_JHDH01000093.1 Protein Homology CDS 16326 17399 . + 0 ID=cds-AB11_RS04525;Parent=gene-AB11_RS04525;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=17399,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS04525;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000094.1 1 88791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000094.1 RefSeq region 1 88791 . + . ID=NZ_JHDH01000094.1:1..88791;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000094.1 RefSeq gene 47 1159 . + . ID=gene-AB11_RS04530;Name=AB11_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04530;old_locus_tag=AB11_0587 NZ_JHDH01000094.1 Protein Homology CDS 47 1159 . + 0 ID=cds-WP_001300563.1;Parent=gene-AB11_RS04530;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS04530;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 1441 2061 . - . ID=gene-AB11_RS04535;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AB11_RS04535;old_locus_tag=AB11_0588 NZ_JHDH01000094.1 Protein Homology CDS 1441 2061 . - 0 ID=cds-WP_001749708.1;Parent=gene-AB11_RS04535;Dbxref=GenBank:WP_001749708.1;Name=WP_001749708.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AB11_RS04535;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 2236 4476 . - . ID=gene-AB11_RS04540;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AB11_RS04540;old_locus_tag=AB11_0589 NZ_JHDH01000094.1 Protein Homology CDS 2236 4476 . - 0 ID=cds-WP_001034916.1;Parent=gene-AB11_RS04540;Dbxref=GenBank:WP_001034916.1;Name=WP_001034916.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AB11_RS04540;product=siderophore enterobactin receptor FepA;protein_id=WP_001034916.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 4719 5921 . + . ID=gene-AB11_RS04545;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AB11_RS04545;old_locus_tag=AB11_0591 NZ_JHDH01000094.1 Protein Homology CDS 4719 5921 . + 0 ID=cds-WP_000125843.1;Parent=gene-AB11_RS04545;Dbxref=GenBank:WP_000125843.1;Name=WP_000125843.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415117.2;locus_tag=AB11_RS04545;product=enterochelin esterase;protein_id=WP_000125843.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 5924 6142 . + . ID=gene-AB11_RS04550;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AB11_RS04550;old_locus_tag=AB11_0592 NZ_JHDH01000094.1 Protein Homology CDS 5924 6142 . + 0 ID=cds-WP_000885798.1;Parent=gene-AB11_RS04550;Dbxref=GenBank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AB11_RS04550;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 6139 10020 . + . ID=gene-AB11_RS04555;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AB11_RS04555;old_locus_tag=AB11_0593 NZ_JHDH01000094.1 Protein Homology CDS 6139 10020 . + 0 ID=cds-WP_000077805.1;Parent=gene-AB11_RS04555;Dbxref=GenBank:WP_000077805.1;Name=WP_000077805.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AB11_RS04555;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000077805.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 10236 11369 . + . ID=gene-AB11_RS04560;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AB11_RS04560;old_locus_tag=AB11_0595 NZ_JHDH01000094.1 Protein Homology CDS 10236 11369 . + 0 ID=cds-WP_000096692.1;Parent=gene-AB11_RS04560;Dbxref=GenBank:WP_000096692.1;Name=WP_000096692.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AB11_RS04560;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_000096692.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 11366 12181 . - . ID=gene-AB11_RS04565;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AB11_RS04565;old_locus_tag=AB11_0596 NZ_JHDH01000094.1 Protein Homology CDS 11366 12181 . - 0 ID=cds-WP_000140647.1;Parent=gene-AB11_RS04565;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AB11_RS04565;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 12178 13170 . - . ID=gene-AB11_RS04570;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AB11_RS04570;old_locus_tag=AB11_0597 NZ_JHDH01000094.1 Protein Homology CDS 12178 13170 . - 0 ID=cds-WP_000640988.1;Parent=gene-AB11_RS04570;Dbxref=GenBank:WP_000640988.1;Name=WP_000640988.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AB11_RS04570;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640988.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 13167 14171 . - . ID=gene-AB11_RS04575;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AB11_RS04575;old_locus_tag=AB11_0598 NZ_JHDH01000094.1 Protein Homology CDS 13167 14171 . - 0 ID=cds-WP_000016947.1;Parent=gene-AB11_RS04575;Dbxref=GenBank:WP_000016947.1;Name=WP_000016947.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415122.1;locus_tag=AB11_RS04575;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_000016947.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 14282 15532 . + . ID=gene-AB11_RS04580;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AB11_RS04580;old_locus_tag=AB11_0599 NZ_JHDH01000094.1 Protein Homology CDS 14282 15532 . + 0 ID=cds-WP_001041786.1;Parent=gene-AB11_RS04580;Dbxref=GenBank:WP_001041786.1;Name=WP_001041786.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AB11_RS04580;product=enterobactin transporter EntS;protein_id=WP_001041786.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 15536 16492 . - . ID=gene-AB11_RS04585;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AB11_RS04585;old_locus_tag=AB11_0600 NZ_JHDH01000094.1 Protein Homology CDS 15536 16492 . - 0 ID=cds-WP_001234311.1;Parent=gene-AB11_RS04585;Dbxref=GenBank:WP_001234311.1;Name=WP_001234311.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AB11_RS04585;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234311.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 16867 18042 . + . ID=gene-AB11_RS04590;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AB11_RS04590;old_locus_tag=AB11_0601 NZ_JHDH01000094.1 Protein Homology CDS 16867 18042 . + 0 ID=cds-WP_000381303.1;Parent=gene-AB11_RS04590;Dbxref=GenBank:WP_000381303.1;Name=WP_000381303.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AB11_RS04590;product=isochorismate synthase EntC;protein_id=WP_000381303.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 18052 19662 . + . ID=gene-AB11_RS04595;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AB11_RS04595;old_locus_tag=AB11_0602 NZ_JHDH01000094.1 Protein Homology CDS 18052 19662 . + 0 ID=cds-WP_032223037.1;Parent=gene-AB11_RS04595;Dbxref=GenBank:WP_032223037.1;Name=WP_032223037.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AB11_RS04595;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_032223037.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 19676 20533 . + . ID=gene-AB11_RS04600;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AB11_RS04600;old_locus_tag=AB11_0603 NZ_JHDH01000094.1 Protein Homology CDS 19676 20533 . + 0 ID=cds-WP_001007138.1;Parent=gene-AB11_RS04600;Dbxref=GenBank:WP_001007138.1;Name=WP_001007138.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AB11_RS04600;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007138.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 20533 21279 . + . ID=gene-AB11_RS04605;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AB11_RS04605;old_locus_tag=AB11_0604 NZ_JHDH01000094.1 Protein Homology CDS 20533 21279 . + 0 ID=cds-WP_000347651.1;Parent=gene-AB11_RS04605;Dbxref=GenBank:WP_000347651.1;Name=WP_000347651.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415128.1;locus_tag=AB11_RS04605;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347651.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 21282 21695 . + . ID=gene-AB11_RS04610;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AB11_RS04610;old_locus_tag=AB11_0605 NZ_JHDH01000094.1 Protein Homology CDS 21282 21695 . + 0 ID=cds-WP_000637953.1;Parent=gene-AB11_RS04610;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AB11_RS04610;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 21876 23981 . + . ID=gene-AB11_RS04615;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AB11_RS04615;old_locus_tag=AB11_0606 NZ_JHDH01000094.1 Protein Homology CDS 21876 23981 . + 0 ID=cds-WP_001043156.1;Parent=gene-AB11_RS04615;Dbxref=GenBank:WP_001043156.1;Name=WP_001043156.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AB11_RS04615;product=pyruvate/proton symporter CstA;protein_id=WP_001043156.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 24164 24361 . + . ID=gene-AB11_RS04620;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AB11_RS04620;old_locus_tag=AB11_0607 NZ_JHDH01000094.1 Protein Homology CDS 24164 24361 . + 0 ID=cds-WP_032223040.1;Parent=gene-AB11_RS04620;Dbxref=GenBank:WP_032223040.1;Name=WP_032223040.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AB11_RS04620;product=YbdD/YjiX family protein;protein_id=WP_032223040.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 24371 25459 . - . ID=gene-AB11_RS04625;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AB11_RS04625;old_locus_tag=AB11_0608 NZ_JHDH01000094.1 Protein Homology CDS 24371 25459 . - 0 ID=cds-WP_001120441.1;Parent=gene-AB11_RS04625;Dbxref=GenBank:WP_001120441.1;Name=WP_001120441.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415132.1;locus_tag=AB11_RS04625;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120441.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 25568 26728 . + . ID=gene-AB11_RS04630;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AB11_RS04630;old_locus_tag=AB11_0609 NZ_JHDH01000094.1 Protein Homology CDS 25568 26728 . + 0 ID=cds-WP_000183907.1;Parent=gene-AB11_RS04630;Dbxref=GenBank:WP_000183907.1;Name=WP_000183907.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AB11_RS04630;product=methionine-oxo-acid transaminase;protein_id=WP_000183907.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 26729 27358 . - . ID=gene-AB11_RS04635;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AB11_RS04635;old_locus_tag=AB11_0610 NZ_JHDH01000094.1 Protein Homology CDS 26729 27358 . - 0 ID=cds-WP_000502936.1;Parent=gene-AB11_RS04635;Dbxref=GenBank:WP_000502936.1;Name=WP_000502936.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308667.1;locus_tag=AB11_RS04635;product=IbrB-like domain-containing protein;protein_id=WP_000502936.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 27331 28551 . - . ID=gene-AB11_RS04640;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AB11_RS04640;old_locus_tag=AB11_0611 NZ_JHDH01000094.1 Protein Homology CDS 27331 28551 . - 0 ID=cds-WP_000029825.1;Parent=gene-AB11_RS04640;Dbxref=GenBank:WP_000029825.1;Name=WP_000029825.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AB11_RS04640;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029825.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 28698 29600 . - . ID=gene-AB11_RS04645;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AB11_RS04645;old_locus_tag=AB11_0612 NZ_JHDH01000094.1 Protein Homology CDS 28698 29600 . - 0 ID=cds-WP_000002472.1;Parent=gene-AB11_RS04645;Dbxref=GenBank:WP_000002472.1;Name=WP_000002472.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AB11_RS04645;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002472.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 29809 30555 . - . ID=gene-AB11_RS04650;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AB11_RS04650;old_locus_tag=AB11_0613 NZ_JHDH01000094.1 Protein Homology CDS 29809 30555 . - 0 ID=cds-WP_000913829.1;Parent=gene-AB11_RS04650;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AB11_RS04650;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 30927 31490 . + . ID=gene-AB11_RS04655;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AB11_RS04655;old_locus_tag=AB11_0614 NZ_JHDH01000094.1 Protein Homology CDS 30927 31490 . + 0 ID=cds-WP_000052796.1;Parent=gene-AB11_RS04655;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AB11_RS04655;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 31735 33300 . + . ID=gene-AB11_RS04660;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AB11_RS04660;old_locus_tag=AB11_0616 NZ_JHDH01000094.1 Protein Homology CDS 31735 33300 . + 0 ID=cds-WP_000887629.1;Parent=gene-AB11_RS04660;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AB11_RS04660;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 33421 33849 . - . ID=gene-AB11_RS04665;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AB11_RS04665;old_locus_tag=AB11_0617 NZ_JHDH01000094.1 Protein Homology CDS 33421 33849 . - 0 ID=cds-WP_000278509.1;Parent=gene-AB11_RS04665;Dbxref=GenBank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AB11_RS04665;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 34070 35308 . + . ID=gene-AB11_RS04670;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AB11_RS04670;old_locus_tag=AB11_0618 NZ_JHDH01000094.1 Protein Homology CDS 34070 35308 . + 0 ID=cds-WP_000646173.1;Parent=gene-AB11_RS04670;Dbxref=GenBank:WP_000646173.1;Name=WP_000646173.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415141.1;locus_tag=AB11_RS04670;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646173.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 35312 35401 . - . ID=gene-AB11_RS25725;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AB11_RS25725;old_locus_tag=AB11_0619 NZ_JHDH01000094.1 Protein Homology CDS 35312 35401 . - 0 ID=cds-WP_000796528.1;Parent=gene-AB11_RS25725;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AB11_RS25725;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 35539 35949 . - . ID=gene-AB11_RS04675;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AB11_RS04675;old_locus_tag=AB11_0620 NZ_JHDH01000094.1 Protein Homology CDS 35539 35949 . - 0 ID=cds-WP_000089731.1;Parent=gene-AB11_RS04675;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AB11_RS04675;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 36179 36985 . - . ID=gene-AB11_RS04680;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AB11_RS04680;old_locus_tag=AB11_0621 NZ_JHDH01000094.1 Protein Homology CDS 36179 36985 . - 0 ID=cds-WP_000643397.1;Parent=gene-AB11_RS04680;Dbxref=GenBank:WP_000643397.1;Name=WP_000643397.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AB11_RS04680;product=ribonuclease I;protein_id=WP_000643397.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 37099 38562 . - . ID=gene-AB11_RS04685;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AB11_RS04685;old_locus_tag=AB11_0622 NZ_JHDH01000094.1 Protein Homology CDS 37099 38562 . - 0 ID=cds-WP_001432638.1;Parent=gene-AB11_RS04685;Dbxref=GenBank:WP_001432638.1;Name=WP_001432638.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AB11_RS04685;product=citrate/succinate antiporter CitT;protein_id=WP_001432638.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 38613 39491 . - . ID=gene-AB11_RS04690;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AB11_RS04690;old_locus_tag=AB11_0623 NZ_JHDH01000094.1 Protein Homology CDS 38613 39491 . - 0 ID=cds-WP_000062457.1;Parent=gene-AB11_RS04690;Dbxref=GenBank:WP_000062457.1;Name=WP_000062457.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AB11_RS04690;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062457.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 39466 40017 . - . ID=gene-AB11_RS04695;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AB11_RS04695;old_locus_tag=AB11_0624 NZ_JHDH01000094.1 Protein Homology CDS 39466 40017 . - 0 ID=cds-WP_000550422.1;Parent=gene-AB11_RS04695;Dbxref=GenBank:WP_000550422.1;Name=WP_000550422.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AB11_RS04695;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550422.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 40021 41553 . - . ID=gene-AB11_RS04700;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AB11_RS04700;old_locus_tag=AB11_0625 NZ_JHDH01000094.1 Protein Homology CDS 40021 41553 . - 0 ID=cds-WP_000192245.1;Parent=gene-AB11_RS04700;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AB11_RS04700;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 41564 42472 . - . ID=gene-AB11_RS04705;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AB11_RS04705;old_locus_tag=AB11_0626 NZ_JHDH01000094.1 Protein Homology CDS 41564 42472 . - 0 ID=cds-WP_001432639.1;Parent=gene-AB11_RS04705;Dbxref=GenBank:WP_001432639.1;Name=WP_001432639.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AB11_RS04705;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001432639.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 42469 42765 . - . ID=gene-AB11_RS04710;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AB11_RS04710;old_locus_tag=AB11_0627 NZ_JHDH01000094.1 Protein Homology CDS 42469 42765 . - 0 ID=cds-WP_000700703.1;Parent=gene-AB11_RS04710;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AB11_RS04710;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 42780 43838 . - . ID=gene-AB11_RS04715;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AB11_RS04715;old_locus_tag=AB11_0628 NZ_JHDH01000094.1 Protein Homology CDS 42780 43838 . - 0 ID=cds-WP_000467705.1;Parent=gene-AB11_RS04715;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AB11_RS04715;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 44218 45876 . + . ID=gene-AB11_RS04720;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AB11_RS04720;old_locus_tag=AB11_0629 NZ_JHDH01000094.1 Protein Homology CDS 44218 45876 . + 0 ID=cds-WP_021570714.1;Parent=gene-AB11_RS04720;Dbxref=GenBank:WP_021570714.1;Name=WP_021570714.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AB11_RS04720;product=sensor histidine kinase DpiB;protein_id=WP_021570714.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 45845 46525 . + . ID=gene-AB11_RS04725;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AB11_RS04725;old_locus_tag=AB11_0630 NZ_JHDH01000094.1 Protein Homology CDS 45845 46525 . + 0 ID=cds-WP_000126500.1;Parent=gene-AB11_RS04725;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AB11_RS04725;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 46566 47951 . - . ID=gene-AB11_RS04730;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB11_RS04730;old_locus_tag=AB11_0631 NZ_JHDH01000094.1 Protein Homology CDS 46566 47951 . - 0 ID=cds-WP_000955063.1;Parent=gene-AB11_RS04730;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AB11_RS04730;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 48540 49100 . + . ID=gene-AB11_RS04735;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AB11_RS04735;old_locus_tag=AB11_0633 NZ_JHDH01000094.1 Protein Homology CDS 48540 49100 . + 0 ID=cds-WP_032223044.1;Parent=gene-AB11_RS04735;Dbxref=GenBank:WP_032223044.1;Name=WP_032223044.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AB11_RS04735;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_032223044.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 49275 49484 . + . ID=gene-AB11_RS04740;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB11_RS04740;old_locus_tag=AB11_0634 NZ_JHDH01000094.1 Protein Homology CDS 49275 49484 . + 0 ID=cds-WP_000034825.1;Parent=gene-AB11_RS04740;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AB11_RS04740;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 49538 49921 . - . ID=gene-AB11_RS04745;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AB11_RS04745;old_locus_tag=AB11_0635 NZ_JHDH01000094.1 Protein Homology CDS 49538 49921 . - 0 ID=cds-WP_029396871.1;Parent=gene-AB11_RS04745;Dbxref=GenBank:WP_029396871.1;Name=WP_029396871.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415157.1;locus_tag=AB11_RS04745;product=fluoride efflux transporter CrcB;protein_id=WP_029396871.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 50014 50802 . + . ID=gene-AB11_RS04750;Name=AB11_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04750;old_locus_tag=AB11_0636 NZ_JHDH01000094.1 Protein Homology CDS 50014 50802 . + 0 ID=cds-WP_000959109.1;Parent=gene-AB11_RS04750;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AB11_RS04750;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 50931 51134 . + . ID=gene-AB11_RS04755;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AB11_RS04755;old_locus_tag=AB11_0637 NZ_JHDH01000094.1 Protein Homology CDS 50931 51134 . + 0 ID=cds-WP_000503931.1;Parent=gene-AB11_RS04755;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AB11_RS04755;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 51235 52200 . - . ID=gene-AB11_RS04760;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AB11_RS04760;old_locus_tag=AB11_0638 NZ_JHDH01000094.1 Protein Homology CDS 51235 52200 . - 0 ID=cds-WP_000042632.1;Parent=gene-AB11_RS04760;Dbxref=GenBank:WP_000042632.1;Name=WP_000042632.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AB11_RS04760;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 52409 53362 . - . ID=gene-AB11_RS04765;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AB11_RS04765;old_locus_tag=AB11_0640 NZ_JHDH01000094.1 Protein Homology CDS 52409 53362 . - 0 ID=cds-WP_000378026.1;Parent=gene-AB11_RS04765;Dbxref=GenBank:WP_000378026.1;Name=WP_000378026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AB11_RS04765;product=YbeF family transcriptional regulator;protein_id=WP_000378026.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 53621 54262 . - . ID=gene-AB11_RS04770;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AB11_RS04770;old_locus_tag=AB11_0641 NZ_JHDH01000094.1 Protein Homology CDS 53621 54262 . - 0 ID=cds-WP_000284027.1;Parent=gene-AB11_RS04770;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AB11_RS04770;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 54363 54626 . - . ID=gene-AB11_RS04775;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AB11_RS04775;old_locus_tag=AB11_0642 NZ_JHDH01000094.1 Protein Homology CDS 54363 54626 . - 0 ID=cds-WP_000850550.1;Parent=gene-AB11_RS04775;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AB11_RS04775;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 54736 55947 . - . ID=gene-AB11_RS04780;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AB11_RS04780;old_locus_tag=AB11_0643 NZ_JHDH01000094.1 Protein Homology CDS 54736 55947 . - 0 ID=cds-WP_001092082.1;Parent=gene-AB11_RS04780;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AB11_RS04780;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 56086 57174 . - . ID=gene-AB11_RS04785;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AB11_RS04785;old_locus_tag=AB11_0645 NZ_JHDH01000094.1 Protein Homology CDS 56086 57174 . - 0 ID=cds-WP_001231430.1;Parent=gene-AB11_RS04785;Dbxref=GenBank:WP_001231430.1;Name=WP_001231430.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AB11_RS04785;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231430.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 57185 58297 . - . ID=gene-AB11_RS04790;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AB11_RS04790;old_locus_tag=AB11_0646 NZ_JHDH01000094.1 Protein Homology CDS 57185 58297 . - 0 ID=cds-WP_000131719.1;Parent=gene-AB11_RS04790;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AB11_RS04790;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 58300 60201 . - . ID=gene-AB11_RS04795;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AB11_RS04795;old_locus_tag=AB11_0647 NZ_JHDH01000094.1 Protein Homology CDS 58300 60201 . - 0 ID=cds-WP_032223046.1;Parent=gene-AB11_RS04795;Dbxref=GenBank:WP_032223046.1;Name=WP_032223046.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AB11_RS04795;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_032223046.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 60232 60699 . - . ID=gene-AB11_RS04800;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AB11_RS04800;old_locus_tag=AB11_0648 NZ_JHDH01000094.1 Protein Homology CDS 60232 60699 . - 0 ID=cds-WP_000776104.1;Parent=gene-AB11_RS04800;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AB11_RS04800;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 60703 61020 . - . ID=gene-AB11_RS04805;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AB11_RS04805;old_locus_tag=AB11_0649 NZ_JHDH01000094.1 Protein Homology CDS 60703 61020 . - 0 ID=cds-WP_001161664.1;Parent=gene-AB11_RS04805;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AB11_RS04805;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 61280 61891 . - . ID=gene-AB11_RS04810;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AB11_RS04810;old_locus_tag=AB11_0650 NZ_JHDH01000094.1 Protein Homology CDS 61280 61891 . - 0 ID=cds-WP_001241888.1;Parent=gene-AB11_RS04810;Dbxref=GenBank:WP_001241888.1;Name=WP_001241888.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308703.1;locus_tag=AB11_RS04810;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241888.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 61915 62556 . - . ID=gene-AB11_RS04815;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AB11_RS04815;old_locus_tag=AB11_0651 NZ_JHDH01000094.1 Protein Homology CDS 61915 62556 . - 0 ID=cds-WP_000838889.1;Parent=gene-AB11_RS04815;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AB11_RS04815;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 62558 63589 . - . ID=gene-AB11_RS04820;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AB11_RS04820;old_locus_tag=AB11_0652 NZ_JHDH01000094.1 Protein Homology CDS 62558 63589 . - 0 ID=cds-WP_000620554.1;Parent=gene-AB11_RS04820;Dbxref=GenBank:WP_000620554.1;Name=WP_000620554.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AB11_RS04820;product=DNA polymerase III subunit delta;protein_id=WP_000620554.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 63589 64170 . - . ID=gene-AB11_RS04825;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AB11_RS04825;old_locus_tag=AB11_0653 NZ_JHDH01000094.1 Protein Homology CDS 63589 64170 . - 0 ID=cds-WP_001512520.1;Parent=gene-AB11_RS04825;Dbxref=GenBank:WP_001512520.1;Name=WP_001512520.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AB11_RS04825;product=LPS assembly lipoprotein LptE;protein_id=WP_001512520.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 64185 66767 . - . ID=gene-AB11_RS04830;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AB11_RS04830;old_locus_tag=AB11_0654 NZ_JHDH01000094.1 Protein Homology CDS 64185 66767 . - 0 ID=cds-WP_001297565.1;Parent=gene-AB11_RS04830;Dbxref=GenBank:WP_001297565.1;Name=WP_001297565.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AB11_RS04830;product=leucine--tRNA ligase;protein_id=WP_001297565.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 67002 67484 . + . ID=gene-AB11_RS04835;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AB11_RS04835;old_locus_tag=AB11_0655 NZ_JHDH01000094.1 Protein Homology CDS 67002 67484 . + 0 ID=cds-WP_001044880.1;Parent=gene-AB11_RS04835;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AB11_RS04835;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 67554 68531 . - . ID=gene-AB11_RS04840;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AB11_RS04840;old_locus_tag=AB11_0656 NZ_JHDH01000094.1 Protein Homology CDS 67554 68531 . - 0 ID=cds-WP_000578178.1;Parent=gene-AB11_RS04840;Dbxref=GenBank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AB11_RS04840;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578178.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 68695 69402 . + . ID=gene-AB11_RS04845;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AB11_RS04845;old_locus_tag=AB11_0658 NZ_JHDH01000094.1 Protein Homology CDS 68695 69402 . + 0 ID=cds-WP_000367023.1;Parent=gene-AB11_RS04845;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AB11_RS04845;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 69399 70826 . + . ID=gene-AB11_RS04850;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AB11_RS04850;old_locus_tag=AB11_0659 NZ_JHDH01000094.1 Protein Homology CDS 69399 70826 . + 0 ID=cds-WP_001655222.1;Parent=gene-AB11_RS04850;Dbxref=GenBank:WP_001655222.1;Name=WP_001655222.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AB11_RS04850;product=J domain-containing protein;protein_id=WP_001655222.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 70836 71390 . - . ID=gene-AB11_RS04855;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AB11_RS04855;old_locus_tag=AB11_0660 NZ_JHDH01000094.1 Protein Homology CDS 70836 71390 . - 0 ID=cds-WP_001035673.1;Parent=gene-AB11_RS04855;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AB11_RS04855;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 71492 72199 . + . ID=gene-AB11_RS04860;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AB11_RS04860;old_locus_tag=AB11_0661 NZ_JHDH01000094.1 Protein Homology CDS 71492 72199 . + 0 ID=cds-WP_001030934.1;Parent=gene-AB11_RS04860;Dbxref=GenBank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AB11_RS04860;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 72196 73647 . + . ID=gene-AB11_RS04865;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AB11_RS04865;old_locus_tag=AB11_0662 NZ_JHDH01000094.1 Protein Homology CDS 72196 73647 . + 0 ID=cds-WP_001300403.1;Parent=gene-AB11_RS04865;Dbxref=GenBank:WP_001300403.1;Name=WP_001300403.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AB11_RS04865;product=co-chaperone DjlC;protein_id=WP_001300403.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 73707 75377 . - . ID=gene-AB11_RS04870;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AB11_RS04870;old_locus_tag=AB11_0663 NZ_JHDH01000094.1 Protein Homology CDS 73707 75377 . - 0 ID=cds-WP_000367875.1;Parent=gene-AB11_RS04870;Dbxref=GenBank:WP_000367875.1;Name=WP_000367875.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AB11_RS04870;product=molecular chaperone HscC;protein_id=WP_000367875.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 75461 76396 . - . ID=gene-AB11_RS04875;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AB11_RS04875;old_locus_tag=AB11_0664 NZ_JHDH01000094.1 Protein Homology CDS 75461 76396 . - 0 ID=cds-WP_001207520.1;Parent=gene-AB11_RS04875;Dbxref=GenBank:WP_001207520.1;Name=WP_001207520.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415184.1;locus_tag=AB11_RS04875;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207520.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 76514 77239 . - . ID=gene-AB11_RS04880;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AB11_RS04880;old_locus_tag=AB11_0665 NZ_JHDH01000094.1 Protein Homology CDS 76514 77239 . - 0 ID=cds-WP_000631384.1;Parent=gene-AB11_RS04880;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AB11_RS04880;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 77239 77913 . - . ID=gene-AB11_RS04885;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AB11_RS04885;old_locus_tag=AB11_0666 NZ_JHDH01000094.1 Protein Homology CDS 77239 77913 . - 0 ID=cds-WP_000272824.1;Parent=gene-AB11_RS04885;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AB11_RS04885;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 77913 78653 . - . ID=gene-AB11_RS04890;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AB11_RS04890;old_locus_tag=AB11_0667 NZ_JHDH01000094.1 Protein Homology CDS 77913 78653 . - 0 ID=cds-WP_000020941.1;Parent=gene-AB11_RS04890;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AB11_RS04890;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 78823 79731 . - . ID=gene-AB11_RS04895;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AB11_RS04895;old_locus_tag=AB11_0668 NZ_JHDH01000094.1 Protein Homology CDS 78823 79731 . - 0 ID=cds-WP_001177086.1;Parent=gene-AB11_RS04895;Dbxref=GenBank:WP_001177086.1;Name=WP_001177086.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415188.1;locus_tag=AB11_RS04895;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177086.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 80128 81666 . - . ID=gene-AB11_RS04900;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AB11_RS04900;old_locus_tag=AB11_0669 NZ_JHDH01000094.1 Protein Homology CDS 80128 81666 . - 0 ID=cds-WP_000853021.1;Parent=gene-AB11_RS04900;Dbxref=GenBank:WP_000853021.1;Name=WP_000853021.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AB11_RS04900;product=apolipoprotein N-acyltransferase;protein_id=WP_000853021.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 81691 82569 . - . ID=gene-AB11_RS04905;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AB11_RS04905;old_locus_tag=AB11_0670 NZ_JHDH01000094.1 Protein Homology CDS 81691 82569 . - 0 ID=cds-WP_001278605.1;Parent=gene-AB11_RS04905;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AB11_RS04905;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 82659 83126 . - . ID=gene-AB11_RS04910;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AB11_RS04910;old_locus_tag=AB11_0671 NZ_JHDH01000094.1 Protein Homology CDS 82659 83126 . - 0 ID=cds-WP_000084469.1;Parent=gene-AB11_RS04910;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AB11_RS04910;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 83123 84163 . - . ID=gene-AB11_RS04915;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AB11_RS04915;old_locus_tag=AB11_0672 NZ_JHDH01000094.1 Protein Homology CDS 83123 84163 . - 0 ID=cds-WP_001018040.1;Parent=gene-AB11_RS04915;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AB11_RS04915;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 84316 85740 . - . ID=gene-AB11_RS04920;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AB11_RS04920;old_locus_tag=AB11_0673 NZ_JHDH01000094.1 Protein Homology CDS 84316 85740 . - 0 ID=cds-WP_000162740.1;Parent=gene-AB11_RS04920;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AB11_RS04920;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 85886 87061 . + . ID=gene-AB11_RS04925;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AB11_RS04925;old_locus_tag=AB11_0674 NZ_JHDH01000094.1 Protein Homology CDS 85886 87061 . + 0 ID=cds-WP_001741356.1;Parent=gene-AB11_RS04925;Dbxref=GenBank:WP_001741356.1;Name=WP_001741356.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AB11_RS04925;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_001741356.1;transl_table=11 NZ_JHDH01000094.1 RefSeq gene 87215 87289 . - . ID=gene-AB11_RS04930;Name=AB11_RS04930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04930;old_locus_tag=AB11_0675 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87215 87289 . - . ID=rna-AB11_RS04930;Parent=gene-AB11_RS04930;anticodon=(pos:complement(87255..87257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04930;product=tRNA-Gln NZ_JHDH01000094.1 tRNAscan-SE exon 87215 87289 . - . ID=exon-AB11_RS04930-1;Parent=rna-AB11_RS04930;anticodon=(pos:complement(87255..87257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04930;product=tRNA-Gln NZ_JHDH01000094.1 RefSeq gene 87327 87401 . - . ID=gene-AB11_RS04935;Name=AB11_RS04935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04935;old_locus_tag=AB11_0676 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87327 87401 . - . ID=rna-AB11_RS04935;Parent=gene-AB11_RS04935;anticodon=(pos:complement(87367..87369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04935;product=tRNA-Gln NZ_JHDH01000094.1 tRNAscan-SE exon 87327 87401 . - . ID=exon-AB11_RS04935-1;Parent=rna-AB11_RS04935;anticodon=(pos:complement(87367..87369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04935;product=tRNA-Gln NZ_JHDH01000094.1 RefSeq gene 87439 87513 . - . ID=gene-AB11_RS04940;Name=AB11_RS04940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04940;old_locus_tag=AB11_0677 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87439 87513 . - . ID=rna-AB11_RS04940;Parent=gene-AB11_RS04940;anticodon=(pos:complement(87479..87481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04940;product=tRNA-Gln NZ_JHDH01000094.1 tRNAscan-SE exon 87439 87513 . - . ID=exon-AB11_RS04940-1;Parent=rna-AB11_RS04940;anticodon=(pos:complement(87479..87481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04940;product=tRNA-Gln NZ_JHDH01000094.1 RefSeq gene 87551 87625 . - . ID=gene-AB11_RS04945;Name=AB11_RS04945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04945;old_locus_tag=AB11_0678 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87551 87625 . - . ID=rna-AB11_RS04945;Parent=gene-AB11_RS04945;anticodon=(pos:complement(87591..87593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04945;product=tRNA-Gln NZ_JHDH01000094.1 tRNAscan-SE exon 87551 87625 . - . ID=exon-AB11_RS04945-1;Parent=rna-AB11_RS04945;anticodon=(pos:complement(87591..87593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04945;product=tRNA-Gln NZ_JHDH01000094.1 RefSeq gene 87673 87749 . - . ID=gene-AB11_RS04950;Name=AB11_RS04950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04950;old_locus_tag=AB11_0679 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87673 87749 . - . ID=rna-AB11_RS04950;Parent=gene-AB11_RS04950;anticodon=(pos:complement(87713..87715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04950;product=tRNA-Met NZ_JHDH01000094.1 tRNAscan-SE exon 87673 87749 . - . ID=exon-AB11_RS04950-1;Parent=rna-AB11_RS04950;anticodon=(pos:complement(87713..87715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04950;product=tRNA-Met NZ_JHDH01000094.1 RefSeq gene 87765 87839 . - . ID=gene-AB11_RS04955;Name=AB11_RS04955;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04955;old_locus_tag=AB11_0681 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87765 87839 . - . ID=rna-AB11_RS04955;Parent=gene-AB11_RS04955;anticodon=(pos:complement(87805..87807));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04955;product=tRNA-Gln NZ_JHDH01000094.1 tRNAscan-SE exon 87765 87839 . - . ID=exon-AB11_RS04955-1;Parent=rna-AB11_RS04955;anticodon=(pos:complement(87805..87807));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04955;product=tRNA-Gln NZ_JHDH01000094.1 RefSeq gene 87863 87947 . - . ID=gene-AB11_RS04960;Name=AB11_RS04960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04960;old_locus_tag=AB11_0682 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87863 87947 . - . ID=rna-AB11_RS04960;Parent=gene-AB11_RS04960;anticodon=(pos:complement(87911..87913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04960;product=tRNA-Leu NZ_JHDH01000094.1 tRNAscan-SE exon 87863 87947 . - . ID=exon-AB11_RS04960-1;Parent=rna-AB11_RS04960;anticodon=(pos:complement(87911..87913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04960;product=tRNA-Leu NZ_JHDH01000094.1 RefSeq gene 87958 88034 . - . ID=gene-AB11_RS04965;Name=AB11_RS04965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04965;old_locus_tag=AB11_0683 NZ_JHDH01000094.1 tRNAscan-SE tRNA 87958 88034 . - . ID=rna-AB11_RS04965;Parent=gene-AB11_RS04965;anticodon=(pos:complement(87998..88000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04965;product=tRNA-Met NZ_JHDH01000094.1 tRNAscan-SE exon 87958 88034 . - . ID=exon-AB11_RS04965-1;Parent=rna-AB11_RS04965;anticodon=(pos:complement(87998..88000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04965;product=tRNA-Met NZ_JHDH01000094.1 RefSeq gene 88414 88791 . - . ID=gene-AB11_RS04970;Name=AB11_RS04970;end_range=88791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04970;old_locus_tag=AB11_0684;partial=true NZ_JHDH01000094.1 Protein Homology CDS 88414 88791 . - 0 ID=cds-WP_032223049.1;Parent=gene-AB11_RS04970;Dbxref=GenBank:WP_032223049.1;Name=WP_032223049.1;Ontology_term=GO:0006529,GO:0004066;end_range=88791,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB11_RS04970;partial=true;product=asparagine synthase-related protein;protein_id=WP_032223049.1;transl_table=11 ##sequence-region NZ_JHDH01000095.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000095.1 RefSeq region 1 1138 . + . ID=NZ_JHDH01000095.1:1..1138;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000095.1 RefSeq gene 1 814 . + . ID=gene-AB11_RS04975;Name=AB11_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS04975;old_locus_tag=AB11_0685;partial=true;start_range=.,1 NZ_JHDH01000095.1 Protein Homology CDS 1 814 . + 1 ID=cds-WP_032223056.1;Parent=gene-AB11_RS04975;Dbxref=GenBank:WP_032223056.1;Name=WP_032223056.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AB11_RS04975;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_032223056.1;start_range=.,1;transl_table=11 NZ_JHDH01000095.1 RefSeq gene 968 1042 . - . ID=gene-AB11_RS04980;Name=AB11_RS04980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04980;old_locus_tag=AB11_0687 NZ_JHDH01000095.1 tRNAscan-SE tRNA 968 1042 . - . ID=rna-AB11_RS04980;Parent=gene-AB11_RS04980;anticodon=(pos:complement(1008..1010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04980;product=tRNA-Gln NZ_JHDH01000095.1 tRNAscan-SE exon 968 1042 . - . ID=exon-AB11_RS04980-1;Parent=rna-AB11_RS04980;anticodon=(pos:complement(1008..1010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04980;product=tRNA-Gln ##sequence-region NZ_JHDH01000096.1 1 2561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000096.1 RefSeq region 1 2561 . + . ID=NZ_JHDH01000096.1:1..2561;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000096.1 RefSeq gene 85 159 . - . ID=gene-AB11_RS04985;Name=AB11_RS04985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04985;old_locus_tag=AB11_0688 NZ_JHDH01000096.1 tRNAscan-SE tRNA 85 159 . - . ID=rna-AB11_RS04985;Parent=gene-AB11_RS04985;anticodon=(pos:complement(125..127));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04985;product=tRNA-Gln NZ_JHDH01000096.1 tRNAscan-SE exon 85 159 . - . ID=exon-AB11_RS04985-1;Parent=rna-AB11_RS04985;anticodon=(pos:complement(125..127));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04985;product=tRNA-Gln NZ_JHDH01000096.1 RefSeq gene 207 283 . - . ID=gene-AB11_RS04990;Name=AB11_RS04990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04990;old_locus_tag=AB11_0689 NZ_JHDH01000096.1 tRNAscan-SE tRNA 207 283 . - . ID=rna-AB11_RS04990;Parent=gene-AB11_RS04990;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04990;product=tRNA-Met NZ_JHDH01000096.1 tRNAscan-SE exon 207 283 . - . ID=exon-AB11_RS04990-1;Parent=rna-AB11_RS04990;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04990;product=tRNA-Met NZ_JHDH01000096.1 RefSeq gene 299 373 . - . ID=gene-AB11_RS04995;Name=AB11_RS04995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS04995;old_locus_tag=AB11_0690 NZ_JHDH01000096.1 tRNAscan-SE tRNA 299 373 . - . ID=rna-AB11_RS04995;Parent=gene-AB11_RS04995;anticodon=(pos:complement(339..341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04995;product=tRNA-Gln NZ_JHDH01000096.1 tRNAscan-SE exon 299 373 . - . ID=exon-AB11_RS04995-1;Parent=rna-AB11_RS04995;anticodon=(pos:complement(339..341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS04995;product=tRNA-Gln NZ_JHDH01000096.1 RefSeq gene 408 482 . - . ID=gene-AB11_RS05000;Name=AB11_RS05000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05000;old_locus_tag=AB11_0691 NZ_JHDH01000096.1 tRNAscan-SE tRNA 408 482 . - . ID=rna-AB11_RS05000;Parent=gene-AB11_RS05000;anticodon=(pos:complement(448..450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05000;product=tRNA-Gln NZ_JHDH01000096.1 tRNAscan-SE exon 408 482 . - . ID=exon-AB11_RS05000-1;Parent=rna-AB11_RS05000;anticodon=(pos:complement(448..450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05000;product=tRNA-Gln NZ_JHDH01000096.1 RefSeq gene 517 591 . - . ID=gene-AB11_RS05005;Name=AB11_RS05005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05005;old_locus_tag=AB11_0692 NZ_JHDH01000096.1 tRNAscan-SE tRNA 517 591 . - . ID=rna-AB11_RS05005;Parent=gene-AB11_RS05005;anticodon=(pos:complement(557..559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05005;product=tRNA-Gln NZ_JHDH01000096.1 tRNAscan-SE exon 517 591 . - . ID=exon-AB11_RS05005-1;Parent=rna-AB11_RS05005;anticodon=(pos:complement(557..559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05005;product=tRNA-Gln NZ_JHDH01000096.1 RefSeq gene 626 700 . - . ID=gene-AB11_RS05010;Name=AB11_RS05010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05010;old_locus_tag=AB11_0693 NZ_JHDH01000096.1 tRNAscan-SE tRNA 626 700 . - . ID=rna-AB11_RS05010;Parent=gene-AB11_RS05010;anticodon=(pos:complement(666..668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05010;product=tRNA-Gln NZ_JHDH01000096.1 tRNAscan-SE exon 626 700 . - . ID=exon-AB11_RS05010-1;Parent=rna-AB11_RS05010;anticodon=(pos:complement(666..668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05010;product=tRNA-Gln NZ_JHDH01000096.1 RefSeq gene 724 808 . - . ID=gene-AB11_RS05015;Name=AB11_RS05015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05015;old_locus_tag=AB11_0694 NZ_JHDH01000096.1 tRNAscan-SE tRNA 724 808 . - . ID=rna-AB11_RS05015;Parent=gene-AB11_RS05015;anticodon=(pos:complement(772..774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05015;product=tRNA-Leu NZ_JHDH01000096.1 tRNAscan-SE exon 724 808 . - . ID=exon-AB11_RS05015-1;Parent=rna-AB11_RS05015;anticodon=(pos:complement(772..774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05015;product=tRNA-Leu NZ_JHDH01000096.1 RefSeq gene 819 895 . - . ID=gene-AB11_RS05020;Name=AB11_RS05020;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05020;old_locus_tag=AB11_0695 NZ_JHDH01000096.1 tRNAscan-SE tRNA 819 895 . - . ID=rna-AB11_RS05020;Parent=gene-AB11_RS05020;anticodon=(pos:complement(859..861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05020;product=tRNA-Met NZ_JHDH01000096.1 tRNAscan-SE exon 819 895 . - . ID=exon-AB11_RS05020-1;Parent=rna-AB11_RS05020;anticodon=(pos:complement(859..861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05020;product=tRNA-Met NZ_JHDH01000096.1 RefSeq gene 1275 2561 . - . ID=gene-AB11_RS05025;Name=asnB;end_range=2561,.;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AB11_RS05025;old_locus_tag=AB11_0696;partial=true NZ_JHDH01000096.1 Protein Homology CDS 1275 2561 . - 0 ID=cds-WP_032223059.1;Parent=gene-AB11_RS05025;Dbxref=GenBank:WP_032223059.1;Name=WP_032223059.1;Ontology_term=GO:0006529,GO:0004066;end_range=2561,.;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB11_RS05025;partial=true;product=asparagine synthase B;protein_id=WP_032223059.1;transl_table=11 ##sequence-region NZ_JHDH01000097.1 1 33515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000097.1 RefSeq region 1 33515 . + . ID=NZ_JHDH01000097.1:1..33515;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000097.1 RefSeq gene 428 2092 . - . ID=gene-AB11_RS05030;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AB11_RS05030;old_locus_tag=AB11_0698 NZ_JHDH01000097.1 Protein Homology CDS 428 2092 . - 0 ID=cds-WP_000337077.1;Parent=gene-AB11_RS05030;Dbxref=GenBank:WP_000337077.1;Name=WP_000337077.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB11_RS05030;product=asparagine synthase B;protein_id=WP_000337077.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 2489 3241 . - . ID=gene-AB11_RS05035;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AB11_RS05035;old_locus_tag=AB11_0700 NZ_JHDH01000097.1 Protein Homology CDS 2489 3241 . - 0 ID=cds-WP_000153129.1;Parent=gene-AB11_RS05035;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AB11_RS05035;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 3289 4509 . - . ID=gene-AB11_RS05040;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AB11_RS05040;old_locus_tag=AB11_0701 NZ_JHDH01000097.1 Protein Homology CDS 3289 4509 . - 0 ID=cds-WP_000187594.1;Parent=gene-AB11_RS05040;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AB11_RS05040;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 4518 5666 . - . ID=gene-AB11_RS05045;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AB11_RS05045;old_locus_tag=AB11_0702 NZ_JHDH01000097.1 Protein Homology CDS 4518 5666 . - 0 ID=cds-WP_000271174.1;Parent=gene-AB11_RS05045;Dbxref=GenBank:WP_000271174.1;Name=WP_000271174.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AB11_RS05045;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271174.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 5726 6526 . - . ID=gene-AB11_RS05050;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AB11_RS05050;old_locus_tag=AB11_0703 NZ_JHDH01000097.1 Protein Homology CDS 5726 6526 . - 0 ID=cds-WP_001237072.1;Parent=gene-AB11_RS05050;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AB11_RS05050;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 6859 8805 . + . ID=gene-AB11_RS05055;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AB11_RS05055;old_locus_tag=AB11_0705 NZ_JHDH01000097.1 Protein Homology CDS 6859 8805 . + 0 ID=cds-WP_001023104.1;Parent=gene-AB11_RS05055;Dbxref=GenBank:WP_001023104.1;Name=WP_001023104.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AB11_RS05055;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023104.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 9073 10737 . + . ID=gene-AB11_RS05060;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AB11_RS05060;old_locus_tag=AB11_0706 NZ_JHDH01000097.1 Protein Homology CDS 9073 10737 . + 0 ID=cds-WP_001287154.1;Parent=gene-AB11_RS05060;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AB11_RS05060;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 11314 12720 . + . ID=gene-AB11_RS05065;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AB11_RS05065;old_locus_tag=AB11_0707 NZ_JHDH01000097.1 Protein Homology CDS 11314 12720 . + 0 ID=cds-WP_001258839.1;Parent=gene-AB11_RS05065;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AB11_RS05065;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 12770 13096 . + . ID=gene-AB11_RS05070;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AB11_RS05070;old_locus_tag=AB11_0708 NZ_JHDH01000097.1 Protein Homology CDS 12770 13096 . + 0 ID=cds-WP_000733592.1;Parent=gene-AB11_RS05070;Dbxref=GenBank:WP_000733592.1;Name=WP_000733592.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AB11_RS05070;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733592.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 13180 13626 . - . ID=gene-AB11_RS05075;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AB11_RS05075;old_locus_tag=AB11_0709 NZ_JHDH01000097.1 Protein Homology CDS 13180 13626 . - 0 ID=cds-WP_000131702.1;Parent=gene-AB11_RS05075;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AB11_RS05075;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 13619 13705 . - . ID=gene-AB11_RS05080;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AB11_RS05080 NZ_JHDH01000097.1 Protein Homology CDS 13619 13705 . - 0 ID=cds-WP_001406816.1;Parent=gene-AB11_RS05080;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AB11_RS05080;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 13915 14445 . - . ID=gene-AB11_RS05085;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AB11_RS05085;old_locus_tag=AB11_0710 NZ_JHDH01000097.1 Protein Homology CDS 13915 14445 . - 0 ID=cds-WP_001018618.1;Parent=gene-AB11_RS05085;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AB11_RS05085;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 14585 14878 . - . ID=gene-AB11_RS05090;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AB11_RS05090;old_locus_tag=AB11_0711 NZ_JHDH01000097.1 Protein Homology CDS 14585 14878 . - 0 ID=cds-WP_001300829.1;Parent=gene-AB11_RS05090;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AB11_RS05090;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 15018 15782 . - . ID=gene-AB11_RS05095;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AB11_RS05095;old_locus_tag=AB11_0712 NZ_JHDH01000097.1 Protein Homology CDS 15018 15782 . - 0 ID=cds-WP_000773301.1;Parent=gene-AB11_RS05095;Dbxref=GenBank:WP_000773301.1;Name=WP_000773301.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AB11_RS05095;product=esterase;protein_id=WP_000773301.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 15967 16512 . + . ID=gene-AB11_RS05100;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AB11_RS05100;old_locus_tag=AB11_0713 NZ_JHDH01000097.1 Protein Homology CDS 15967 16512 . + 0 ID=cds-WP_000848387.1;Parent=gene-AB11_RS05100;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AB11_RS05100;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 16538 18178 . + . ID=gene-AB11_RS05105;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AB11_RS05105;old_locus_tag=AB11_0714 NZ_JHDH01000097.1 Protein Homology CDS 16538 18178 . + 0 ID=cds-WP_001716298.1;Parent=gene-AB11_RS05105;Dbxref=GenBank:WP_001716298.1;Name=WP_001716298.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AB11_RS05105;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001716298.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 18392 18886 . + . ID=gene-AB11_RS05110;Name=AB11_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05110;old_locus_tag=AB11_0715 NZ_JHDH01000097.1 Protein Homology CDS 18392 18886 . + 0 ID=cds-WP_001529624.1;Parent=gene-AB11_RS05110;Dbxref=GenBank:WP_001529624.1;Name=WP_001529624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AB11_RS05110;product=hypothetical protein;protein_id=WP_001529624.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 18927 19577 . - . ID=gene-AB11_RS05115;Name=AB11_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05115;old_locus_tag=AB11_0716 NZ_JHDH01000097.1 Protein Homology CDS 18927 19577 . - 0 ID=cds-WP_001208814.1;Parent=gene-AB11_RS05115;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AB11_RS05115;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11 NZ_JHDH01000097.1 RefSeq pseudogene 19701 19835 . - . ID=gene-AB11_RS05120;Name=AB11_RS05120;end_range=19835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05120;partial=true;pseudo=true NZ_JHDH01000097.1 Protein Homology CDS 19701 19835 . - 0 ID=cds-AB11_RS05120;Parent=gene-AB11_RS05120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=19835,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AB11_RS05120;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 19926 21245 . - . ID=gene-AB11_RS05125;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AB11_RS05125;old_locus_tag=AB11_0717 NZ_JHDH01000097.1 Protein Homology CDS 19926 21245 . - 0 ID=cds-WP_000075845.1;Parent=gene-AB11_RS05125;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AB11_RS05125;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 21242 23440 . - . ID=gene-AB11_RS05130;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AB11_RS05130;old_locus_tag=AB11_0718 NZ_JHDH01000097.1 Protein Homology CDS 21242 23440 . - 0 ID=cds-WP_032223063.1;Parent=gene-AB11_RS05130;Dbxref=GenBank:WP_032223063.1;Name=WP_032223063.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415220.1;locus_tag=AB11_RS05130;product=ornithine decarboxylase SpeF;protein_id=WP_032223063.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 23698 23802 . - . ID=gene-AB11_RS25280;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AB11_RS25280 NZ_JHDH01000097.1 Protein Homology CDS 23698 23802 . - 0 ID=cds-WP_211180488.1;Parent=gene-AB11_RS25280;Dbxref=GenBank:WP_211180488.1;Name=WP_211180488.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AB11_RS25280;product=leader peptide SpeFL;protein_id=WP_211180488.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 24036 24713 . - . ID=gene-AB11_RS05140;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AB11_RS05140;old_locus_tag=AB11_0719 NZ_JHDH01000097.1 Protein Homology CDS 24036 24713 . - 0 ID=cds-WP_000186076.1;Parent=gene-AB11_RS05140;Dbxref=GenBank:WP_000186076.1;Name=WP_000186076.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AB11_RS05140;product=two-component system response regulator KdpE;protein_id=WP_000186076.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 24710 27394 . - . ID=gene-AB11_RS05145;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AB11_RS05145;old_locus_tag=AB11_0720 NZ_JHDH01000097.1 Protein Homology CDS 24710 27394 . - 0 ID=cds-WP_001310640.1;Parent=gene-AB11_RS05145;Dbxref=GenBank:WP_001310640.1;Name=WP_001310640.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415223.1;locus_tag=AB11_RS05145;product=two-component system sensor histidine kinase KdpD;protein_id=WP_001310640.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 27387 27959 . - . ID=gene-AB11_RS05150;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AB11_RS05150;old_locus_tag=AB11_0721 NZ_JHDH01000097.1 Protein Homology CDS 27387 27959 . - 0 ID=cds-WP_001300431.1;Parent=gene-AB11_RS05150;Dbxref=GenBank:WP_001300431.1;Name=WP_001300431.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AB11_RS05150;product=K(+)-transporting ATPase subunit C;protein_id=WP_001300431.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 27968 30016 . - . ID=gene-AB11_RS05155;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AB11_RS05155;old_locus_tag=AB11_0722 NZ_JHDH01000097.1 Protein Homology CDS 27968 30016 . - 0 ID=cds-WP_000087939.1;Parent=gene-AB11_RS05155;Dbxref=GenBank:WP_000087939.1;Name=WP_000087939.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AB11_RS05155;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087939.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 30039 31712 . - . ID=gene-AB11_RS05160;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AB11_RS05160;old_locus_tag=AB11_0723 NZ_JHDH01000097.1 Protein Homology CDS 30039 31712 . - 0 ID=cds-WP_000741131.1;Parent=gene-AB11_RS05160;Dbxref=GenBank:WP_000741131.1;Name=WP_000741131.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AB11_RS05160;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 31712 31801 . - . ID=gene-AB11_RS05165;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AB11_RS05165 NZ_JHDH01000097.1 Protein Homology CDS 31712 31801 . - 0 ID=cds-WP_001272653.1;Parent=gene-AB11_RS05165;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AB11_RS05165;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 32114 32320 . + . ID=gene-AB11_RS05170;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AB11_RS05170;old_locus_tag=AB11_0725 NZ_JHDH01000097.1 Protein Homology CDS 32114 32320 . + 0 ID=cds-WP_000424924.1;Parent=gene-AB11_RS05170;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AB11_RS05170;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JHDH01000097.1 RefSeq gene 32563 33515 . + . ID=gene-AB11_RS05175;Name=AB11_RS05175;end_range=33515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05175;old_locus_tag=AB11_0726;partial=true NZ_JHDH01000097.1 Protein Homology CDS 32563 33515 . + 0 ID=cds-WP_001399548.1;Parent=gene-AB11_RS05175;Dbxref=GenBank:WP_001399548.1;Name=WP_001399548.1;end_range=33515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB11_RS05175;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001399548.1;transl_table=11 ##sequence-region NZ_JHDH01000098.1 1 5357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000098.1 RefSeq region 1 5357 . + . ID=NZ_JHDH01000098.1:1..5357;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000098.1 RefSeq gene 51 748 . + . ID=gene-AB11_RS05180;Name=AB11_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05180;old_locus_tag=AB11_0727 NZ_JHDH01000098.1 Protein Homology CDS 51 300 . + 0 ID=cds-WP_095033700.1-2;Parent=gene-AB11_RS05180;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS05180;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000098.1 Protein Homology CDS 300 748 . + 2 ID=cds-WP_095033700.1-2;Parent=gene-AB11_RS05180;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS05180;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 759 1085 . - . ID=gene-AB11_RS05185;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AB11_RS05185;old_locus_tag=AB11_0728 NZ_JHDH01000098.1 Protein Homology CDS 759 1085 . - 0 ID=cds-WP_050436705.1;Parent=gene-AB11_RS05185;Dbxref=GenBank:WP_050436705.1;Name=WP_050436705.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297768.1;locus_tag=AB11_RS05185;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_050436705.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 1406 2008 . + . ID=gene-AB11_RS05190;Name=AB11_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05190;old_locus_tag=AB11_0729 NZ_JHDH01000098.1 Protein Homology CDS 1406 2008 . + 0 ID=cds-WP_077699284.1;Parent=gene-AB11_RS05190;Dbxref=GenBank:WP_077699284.1;Name=WP_077699284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AB11_RS05190;product=transglycosylase SLT domain-containing protein;protein_id=WP_077699284.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 2304 3125 . - . ID=gene-AB11_RS05195;Name=AB11_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05195;old_locus_tag=AB11_0730 NZ_JHDH01000098.1 Protein Homology CDS 2304 3125 . - 0 ID=cds-WP_001774288.1;Parent=gene-AB11_RS05195;Dbxref=GenBank:WP_001774288.1;Name=WP_001774288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AB11_RS05195;product=DUF932 domain-containing protein;protein_id=WP_001774288.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 3244 3531 . - . ID=gene-AB11_RS05200;Name=AB11_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05200;old_locus_tag=AB11_0731 NZ_JHDH01000098.1 Protein Homology CDS 3244 3531 . - 0 ID=cds-WP_001774287.1;Parent=gene-AB11_RS05200;Dbxref=GenBank:WP_001774287.1;Name=WP_001774287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AB11_RS05200;product=hypothetical protein;protein_id=WP_001774287.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 3556 3762 . - . ID=gene-AB11_RS25195;Name=AB11_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25195 NZ_JHDH01000098.1 Protein Homology CDS 3556 3762 . - 0 ID=cds-WP_000547965.1;Parent=gene-AB11_RS25195;Dbxref=GenBank:WP_000547965.1;Name=WP_000547965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB11_RS25195;product=hypothetical protein;protein_id=WP_000547965.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 3832 4257 . + . ID=gene-AB11_RS05205;Name=AB11_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05205 NZ_JHDH01000098.1 Protein Homology CDS 3832 4257 . + 0 ID=cds-WP_064734442.1;Parent=gene-AB11_RS05205;Dbxref=GenBank:WP_064734442.1;Name=WP_064734442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB11_RS05205;product=hypothetical protein;protein_id=WP_064734442.1;transl_table=11 NZ_JHDH01000098.1 RefSeq gene 4343 4906 . - . ID=gene-AB11_RS05210;Name=AB11_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05210;old_locus_tag=AB11_0732 NZ_JHDH01000098.1 Protein Homology CDS 4343 4906 . - 0 ID=cds-WP_001774731.1;Parent=gene-AB11_RS05210;Dbxref=GenBank:WP_001774731.1;Name=WP_001774731.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AB11_RS05210;product=methyltransferase;protein_id=WP_001774731.1;transl_table=11 NZ_JHDH01000098.1 RefSeq pseudogene 4942 5357 . - . ID=gene-AB11_RS05215;Name=AB11_RS05215;end_range=5357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05215;old_locus_tag=AB11_0733;partial=true;pseudo=true NZ_JHDH01000098.1 Protein Homology CDS 4942 5357 . - 2 ID=cds-AB11_RS05215;Parent=gene-AB11_RS05215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AB11_RS05215;partial=true;product=DUF3560 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000099.1 1 916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000099.1 RefSeq region 1 916 . + . ID=NZ_JHDH01000099.1:1..916;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000099.1 RefSeq gene 1 916 . + . ID=gene-AB11_RS05220;Name=AB11_RS05220;end_range=916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05220;old_locus_tag=AB11_0734;partial=true;start_range=.,1 NZ_JHDH01000099.1 Protein Homology CDS 1 916 . + 2 ID=cds-WP_032223083.1;Parent=gene-AB11_RS05220;Dbxref=GenBank:WP_032223083.1;Name=WP_032223083.1;end_range=916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB11_RS05220;partial=true;product=RHS domain-containing protein;protein_id=WP_032223083.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDH01000100.1 1 3168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000100.1 RefSeq region 1 3168 . + . ID=NZ_JHDH01000100.1:1..3168;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000100.1 RefSeq gene 1 1273 . + . ID=gene-AB11_RS05225;Name=AB11_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05225;old_locus_tag=AB11_0735;partial=true;start_range=.,1 NZ_JHDH01000100.1 Protein Homology CDS 1 1273 . + 1 ID=cds-WP_032223085.1;Parent=gene-AB11_RS05225;Dbxref=GenBank:WP_032223085.1;Name=WP_032223085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AB11_RS05225;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_032223085.1;start_range=.,1;transl_table=11 NZ_JHDH01000100.1 RefSeq gene 1270 1839 . + . ID=gene-AB11_RS05230;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=AB11_RS05230;old_locus_tag=AB11_0736 NZ_JHDH01000100.1 Protein Homology CDS 1270 1839 . + 0 ID=cds-WP_000832338.1;Parent=gene-AB11_RS05230;Dbxref=GenBank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AB11_RS05230;product=protein YbfC;protein_id=WP_000832338.1;transl_table=11 NZ_JHDH01000100.1 RefSeq pseudogene 2065 2301 . + . ID=gene-AB11_RS05235;Name=ybfQ;end_range=2301,.;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=AB11_RS05235;old_locus_tag=AB11_0737;partial=true;pseudo=true NZ_JHDH01000100.1 Protein Homology CDS 2065 2301 . + 0 ID=cds-AB11_RS05235;Parent=gene-AB11_RS05235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2301,.;gbkey=CDS;gene=ybfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS05235;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000100.1 RefSeq pseudogene 2445 3168 . + . ID=gene-AB11_RS05240;Name=AB11_RS05240;end_range=3168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05240;old_locus_tag=AB11_0738;partial=true;pseudo=true NZ_JHDH01000100.1 Protein Homology CDS 2445 3168 . + 0 ID=cds-AB11_RS05240;Parent=gene-AB11_RS05240;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3168,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS05240;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000101.1 1 14655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000101.1 RefSeq region 1 14655 . + . ID=NZ_JHDH01000101.1:1..14655;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000101.1 RefSeq pseudogene 225 983 . + . ID=gene-AB11_RS05245;Name=ybfD;end_range=983,.;gbkey=Gene;gene=ybfD;gene_biotype=pseudogene;locus_tag=AB11_RS05245;old_locus_tag=AB11_0739;partial=true;pseudo=true NZ_JHDH01000101.1 Protein Homology CDS 225 983 . + 0 ID=cds-AB11_RS05245;Parent=gene-AB11_RS05245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=983,.;gbkey=CDS;gene=ybfD;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS05245;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 1134 1643 . + . ID=gene-AB11_RS05250;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AB11_RS05250;old_locus_tag=AB11_0740 NZ_JHDH01000101.1 Protein Homology CDS 1134 1643 . + 0 ID=cds-WP_001053305.1;Parent=gene-AB11_RS05250;Dbxref=GenBank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AB11_RS05250;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 1640 3058 . + . ID=gene-AB11_RS05255;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AB11_RS05255;old_locus_tag=AB11_0741 NZ_JHDH01000101.1 Protein Homology CDS 1640 3058 . + 0 ID=cds-WP_000207142.1;Parent=gene-AB11_RS05255;Dbxref=GenBank:WP_000207142.1;Name=WP_000207142.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415236.1;locus_tag=AB11_RS05255;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000207142.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 3208 4689 . - . ID=gene-AB11_RS05260;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AB11_RS05260;old_locus_tag=AB11_0742 NZ_JHDH01000101.1 Protein Homology CDS 3208 4689 . - 0 ID=cds-WP_032223091.1;Parent=gene-AB11_RS05260;Dbxref=GenBank:WP_032223091.1;Name=WP_032223091.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415237.1;locus_tag=AB11_RS05260;product=dipeptide permease DtpD;protein_id=WP_032223091.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 4960 5703 . + . ID=gene-AB11_RS05265;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AB11_RS05265;old_locus_tag=AB11_0743 NZ_JHDH01000101.1 Protein Homology CDS 4960 5703 . + 0 ID=cds-WP_000798871.1;Parent=gene-AB11_RS05265;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AB11_RS05265;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 5726 6382 . + . ID=gene-AB11_RS05270;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AB11_RS05270;old_locus_tag=AB11_0744 NZ_JHDH01000101.1 Protein Homology CDS 5726 6382 . + 0 ID=cds-WP_001188343.1;Parent=gene-AB11_RS05270;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AB11_RS05270;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 6376 7308 . + . ID=gene-AB11_RS05275;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AB11_RS05275;old_locus_tag=AB11_0745 NZ_JHDH01000101.1 Protein Homology CDS 6376 7308 . + 0 ID=cds-WP_000912724.1;Parent=gene-AB11_RS05275;Dbxref=GenBank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AB11_RS05275;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912724.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 7298 8032 . + . ID=gene-AB11_RS05280;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AB11_RS05280;old_locus_tag=AB11_0746 NZ_JHDH01000101.1 Protein Homology CDS 7298 8032 . + 0 ID=cds-WP_000687130.1;Parent=gene-AB11_RS05280;Dbxref=GenBank:WP_000687130.1;Name=WP_000687130.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AB11_RS05280;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687130.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 8068 8859 . + . ID=gene-AB11_RS05285;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AB11_RS05285;old_locus_tag=AB11_0747 NZ_JHDH01000101.1 Protein Homology CDS 8068 8859 . + 0 ID=cds-WP_001114026.1;Parent=gene-AB11_RS05285;Dbxref=GenBank:WP_001114026.1;Name=WP_001114026.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AB11_RS05285;product=endonuclease VIII;protein_id=WP_001114026.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 8856 9902 . - . ID=gene-AB11_RS05290;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AB11_RS05290;old_locus_tag=AB11_0748 NZ_JHDH01000101.1 Protein Homology CDS 8856 9902 . - 0 ID=cds-WP_001336221.1;Parent=gene-AB11_RS05290;Dbxref=GenBank:WP_001336221.1;Name=WP_001336221.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AB11_RS05290;product=AbrB family transcriptional regulator;protein_id=WP_001336221.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 10054 11115 . - . ID=gene-AB11_RS05295;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AB11_RS05295;old_locus_tag=AB11_0749 NZ_JHDH01000101.1 Protein Homology CDS 10054 11115 . - 0 ID=cds-WP_001272410.1;Parent=gene-AB11_RS05295;Dbxref=GenBank:WP_001272410.1;Name=WP_001272410.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AB11_RS05295;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_JHDH01000101.1 RefSeq gene 11112 11840 . - . ID=gene-AB11_RS05300;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AB11_RS05300;old_locus_tag=AB11_0750 NZ_JHDH01000101.1 Protein Homology CDS 11112 11840 . - 0 ID=cds-WP_000142799.1;Parent=gene-AB11_RS05300;Dbxref=GenBank:WP_000142799.1;Name=WP_000142799.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415245.1;locus_tag=AB11_RS05300;product=fimbrial biogenesis chaperone;protein_id=WP_000142799.1;transl_table=11 NZ_JHDH01000101.1 RefSeq pseudogene 11855 14005 . - . ID=gene-AB11_RS05305;Name=AB11_RS05305;end_range=14005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05305;old_locus_tag=AB11_0751;partial=true;pseudo=true NZ_JHDH01000101.1 Protein Homology CDS 11855 14005 . - 0 ID=cds-AB11_RS05305;Parent=gene-AB11_RS05305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=14005,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415246.2;locus_tag=AB11_RS05305;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JHDH01000101.1 RefSeq pseudogene 14056 14655 . + . ID=gene-AB11_RS05310;Name=AB11_RS05310;end_range=14655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05310;old_locus_tag=AB11_0752;partial=true;pseudo=true NZ_JHDH01000101.1 Protein Homology CDS 14056 14655 . + 0 ID=cds-AB11_RS05310;Parent=gene-AB11_RS05310;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14655,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS05310;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000102.1 1 340904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000102.1 RefSeq region 1 340904 . + . ID=NZ_JHDH01000102.1:1..340904;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000102.1 RefSeq pseudogene 1 314 . + . ID=gene-AB11_RS05315;Name=AB11_RS05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS05315;old_locus_tag=AB11_0753;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000102.1 Protein Homology CDS 1 314 . + 2 ID=cds-AB11_RS05315;Parent=gene-AB11_RS05315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS05315;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 482 1765 . - . ID=gene-AB11_RS05320;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AB11_RS05320;old_locus_tag=AB11_0754 NZ_JHDH01000102.1 Protein Homology CDS 482 1765 . - 0 ID=cds-WP_000785834.1;Parent=gene-AB11_RS05320;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0036440,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate synthase activity|0036440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AB11_RS05320;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 1971 2078 . - . ID=gene-AB11_RS05325;Name=AB11_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05325 NZ_JHDH01000102.1 Protein Homology CDS 1971 2078 . - 0 ID=cds-WP_001305582.1;Parent=gene-AB11_RS05325;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AB11_RS05325;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 2459 2863 . + . ID=gene-AB11_RS05330;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AB11_RS05330 NZ_JHDH01000102.1 Protein Homology CDS 2459 2863 . + 0 ID=cds-WP_000263347.1;Parent=gene-AB11_RS05330;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AB11_RS05330;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 2857 3204 . + . ID=gene-AB11_RS05335;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AB11_RS05335;old_locus_tag=AB11_0757 NZ_JHDH01000102.1 Protein Homology CDS 2857 3204 . + 0 ID=cds-WP_000254365.1;Parent=gene-AB11_RS05335;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AB11_RS05335;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 3204 4970 . + . ID=gene-AB11_RS05340;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AB11_RS05340;old_locus_tag=AB11_0758 NZ_JHDH01000102.1 Protein Homology CDS 3204 4970 . + 0 ID=cds-WP_000775540.1;Parent=gene-AB11_RS05340;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AB11_RS05340;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 4986 5702 . + . ID=gene-AB11_RS05345;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AB11_RS05345;old_locus_tag=AB11_0759 NZ_JHDH01000102.1 Protein Homology CDS 4986 5702 . + 0 ID=cds-WP_001235263.1;Parent=gene-AB11_RS05345;Dbxref=GenBank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AB11_RS05345;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 5903 8704 . + . ID=gene-AB11_RS05350;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AB11_RS05350;old_locus_tag=AB11_0760 NZ_JHDH01000102.1 Protein Homology CDS 5903 8704 . + 0 ID=cds-WP_001181473.1;Parent=gene-AB11_RS05350;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AB11_RS05350;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 8719 9936 . + . ID=gene-AB11_RS05355;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AB11_RS05355;old_locus_tag=AB11_0761 NZ_JHDH01000102.1 Protein Homology CDS 8719 9936 . + 0 ID=cds-WP_000099823.1;Parent=gene-AB11_RS05355;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AB11_RS05355;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 10302 11468 . + . ID=gene-AB11_RS05360;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AB11_RS05360;old_locus_tag=AB11_0762 NZ_JHDH01000102.1 Protein Homology CDS 10302 11468 . + 0 ID=cds-WP_001048602.1;Parent=gene-AB11_RS05360;Dbxref=GenBank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AB11_RS05360;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 11468 12337 . + . ID=gene-AB11_RS05365;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AB11_RS05365;old_locus_tag=AB11_0763 NZ_JHDH01000102.1 Protein Homology CDS 11468 12337 . + 0 ID=cds-WP_001391198.1;Parent=gene-AB11_RS05365;Dbxref=GenBank:WP_001391198.1;Name=WP_001391198.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AB11_RS05365;product=succinate--CoA ligase subunit alpha;protein_id=WP_001391198.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 12441 13163 . - . ID=gene-AB11_RS05370;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AB11_RS05370;old_locus_tag=AB11_0764 NZ_JHDH01000102.1 Protein Homology CDS 12441 13163 . - 0 ID=cds-WP_000509902.1;Parent=gene-AB11_RS05370;Dbxref=GenBank:WP_000509902.1;Name=WP_000509902.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AB11_RS05370;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 13332 15248 . + . ID=gene-AB11_RS05375;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AB11_RS05375;old_locus_tag=AB11_0765 NZ_JHDH01000102.1 Protein Homology CDS 13332 15248 . + 0 ID=cds-WP_001054864.1;Parent=gene-AB11_RS05375;Dbxref=GenBank:WP_001054864.1;Name=WP_001054864.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AB11_RS05375;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054864.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 15266 17899 . + . ID=gene-AB11_RS05380;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AB11_RS05380;old_locus_tag=AB11_0766 NZ_JHDH01000102.1 Protein Homology CDS 15266 17899 . + 0 ID=cds-WP_000648976.1;Parent=gene-AB11_RS05380;Dbxref=GenBank:WP_000648976.1;Name=WP_000648976.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AB11_RS05380;product=mannosylglycerate hydrolase;protein_id=WP_000648976.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 18746 20314 . + . ID=gene-AB11_RS05385;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AB11_RS05385;old_locus_tag=AB11_0768 NZ_JHDH01000102.1 Protein Homology CDS 18746 20314 . + 0 ID=cds-WP_000884361.1;Parent=gene-AB11_RS05385;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AB11_RS05385;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 20330 21469 . + . ID=gene-AB11_RS05390;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AB11_RS05390;old_locus_tag=AB11_0769 NZ_JHDH01000102.1 Protein Homology CDS 20330 21469 . + 0 ID=cds-WP_000568275.1;Parent=gene-AB11_RS05390;Dbxref=GenBank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AB11_RS05390;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 21484 21597 . + . ID=gene-AB11_RS05395;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=AB11_RS05395;old_locus_tag=AB11_0770 NZ_JHDH01000102.1 Protein Homology CDS 21484 21597 . + 0 ID=cds-WP_000270282.1;Parent=gene-AB11_RS05395;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AB11_RS05395;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 21597 21890 . + . ID=gene-AB11_RS05400;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AB11_RS05400;old_locus_tag=AB11_0771 NZ_JHDH01000102.1 Protein Homology CDS 21597 21890 . + 0 ID=cds-WP_000034602.1;Parent=gene-AB11_RS05400;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AB11_RS05400;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 22040 22444 . + . ID=gene-AB11_RS05405;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AB11_RS05405;old_locus_tag=AB11_0772 NZ_JHDH01000102.1 Protein Homology CDS 22040 22444 . + 0 ID=cds-WP_001098384.1;Parent=gene-AB11_RS05405;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AB11_RS05405;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 22441 23133 . + . ID=gene-AB11_RS05410;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AB11_RS05410;old_locus_tag=AB11_0773 NZ_JHDH01000102.1 Protein Homology CDS 22441 23133 . + 0 ID=cds-WP_000131314.1;Parent=gene-AB11_RS05410;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AB11_RS05410;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 23137 23565 . + . ID=gene-AB11_RS05415;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AB11_RS05415;old_locus_tag=AB11_0774 NZ_JHDH01000102.1 Protein Homology CDS 23137 23565 . + 0 ID=cds-WP_000090097.1;Parent=gene-AB11_RS05415;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AB11_RS05415;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 23630 24895 . + . ID=gene-AB11_RS05420;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AB11_RS05420;old_locus_tag=AB11_0775 NZ_JHDH01000102.1 Protein Homology CDS 23630 24895 . + 0 ID=cds-WP_000030637.1;Parent=gene-AB11_RS05420;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AB11_RS05420;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 25028 26320 . + . ID=gene-AB11_RS05425;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AB11_RS05425;old_locus_tag=AB11_0776 NZ_JHDH01000102.1 Protein Homology CDS 25028 26320 . + 0 ID=cds-WP_001295307.1;Parent=gene-AB11_RS05425;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AB11_RS05425;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 26355 26876 . + . ID=gene-AB11_RS05430;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AB11_RS05430;old_locus_tag=AB11_0777 NZ_JHDH01000102.1 Protein Homology CDS 26355 26876 . + 0 ID=cds-WP_001295306.1;Parent=gene-AB11_RS05430;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AB11_RS05430;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 26886 27677 . + . ID=gene-AB11_RS05435;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AB11_RS05435;old_locus_tag=AB11_0778 NZ_JHDH01000102.1 Protein Homology CDS 26886 27677 . + 0 ID=cds-WP_000097580.1;Parent=gene-AB11_RS05435;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AB11_RS05435;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 27842 27917 . + . ID=gene-AB11_RS05440;Name=AB11_RS05440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05440;old_locus_tag=AB11_0779 NZ_JHDH01000102.1 tRNAscan-SE tRNA 27842 27917 . + . ID=rna-AB11_RS05440;Parent=gene-AB11_RS05440;anticodon=(pos:27875..27877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05440;product=tRNA-Lys NZ_JHDH01000102.1 tRNAscan-SE exon 27842 27917 . + . ID=exon-AB11_RS05440-1;Parent=rna-AB11_RS05440;anticodon=(pos:27875..27877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05440;product=tRNA-Lys NZ_JHDH01000102.1 RefSeq gene 28053 28128 . + . ID=gene-AB11_RS05445;Name=AB11_RS05445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05445;old_locus_tag=AB11_0780 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28053 28128 . + . ID=rna-AB11_RS05445;Parent=gene-AB11_RS05445;anticodon=(pos:28086..28088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05445;product=tRNA-Val NZ_JHDH01000102.1 tRNAscan-SE exon 28053 28128 . + . ID=exon-AB11_RS05445-1;Parent=rna-AB11_RS05445;anticodon=(pos:28086..28088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05445;product=tRNA-Val NZ_JHDH01000102.1 RefSeq gene 28131 28206 . + . ID=gene-AB11_RS05450;Name=AB11_RS05450;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05450;old_locus_tag=AB11_0781 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28131 28206 . + . ID=rna-AB11_RS05450;Parent=gene-AB11_RS05450;anticodon=(pos:28164..28166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05450;product=tRNA-Lys NZ_JHDH01000102.1 tRNAscan-SE exon 28131 28206 . + . ID=exon-AB11_RS05450-1;Parent=rna-AB11_RS05450;anticodon=(pos:28164..28166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05450;product=tRNA-Lys NZ_JHDH01000102.1 RefSeq gene 28258 28333 . + . ID=gene-AB11_RS05455;Name=AB11_RS05455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05455;old_locus_tag=AB11_0782 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28258 28333 . + . ID=rna-AB11_RS05455;Parent=gene-AB11_RS05455;anticodon=(pos:28291..28293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05455;product=tRNA-Val NZ_JHDH01000102.1 tRNAscan-SE exon 28258 28333 . + . ID=exon-AB11_RS05455-1;Parent=rna-AB11_RS05455;anticodon=(pos:28291..28293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05455;product=tRNA-Val NZ_JHDH01000102.1 RefSeq gene 28337 28412 . + . ID=gene-AB11_RS05460;Name=AB11_RS05460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05460;old_locus_tag=AB11_0783 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28337 28412 . + . ID=rna-AB11_RS05460;Parent=gene-AB11_RS05460;anticodon=(pos:28370..28372);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05460;product=tRNA-Lys NZ_JHDH01000102.1 tRNAscan-SE exon 28337 28412 . + . ID=exon-AB11_RS05460-1;Parent=rna-AB11_RS05460;anticodon=(pos:28370..28372);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05460;product=tRNA-Lys NZ_JHDH01000102.1 RefSeq gene 28559 28634 . + . ID=gene-AB11_RS05465;Name=AB11_RS05465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05465;old_locus_tag=AB11_0784 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28559 28634 . + . ID=rna-AB11_RS05465;Parent=gene-AB11_RS05465;anticodon=(pos:28592..28594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05465;product=tRNA-Lys NZ_JHDH01000102.1 tRNAscan-SE exon 28559 28634 . + . ID=exon-AB11_RS05465-1;Parent=rna-AB11_RS05465;anticodon=(pos:28592..28594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05465;product=tRNA-Lys NZ_JHDH01000102.1 RefSeq gene 28767 28842 . + . ID=gene-AB11_RS05470;Name=AB11_RS05470;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS05470;old_locus_tag=AB11_0785 NZ_JHDH01000102.1 tRNAscan-SE tRNA 28767 28842 . + . ID=rna-AB11_RS05470;Parent=gene-AB11_RS05470;anticodon=(pos:28800..28802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05470;product=tRNA-Lys NZ_JHDH01000102.1 tRNAscan-SE exon 28767 28842 . + . ID=exon-AB11_RS05470-1;Parent=rna-AB11_RS05470;anticodon=(pos:28800..28802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS05470;product=tRNA-Lys NZ_JHDH01000102.1 RefSeq gene 29124 30167 . + . ID=gene-AB11_RS05475;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB11_RS05475;old_locus_tag=AB11_0786 NZ_JHDH01000102.1 Protein Homology CDS 29124 30167 . + 0 ID=cds-WP_000115290.1;Parent=gene-AB11_RS05475;Dbxref=GenBank:WP_000115290.1;Name=WP_000115290.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB11_RS05475;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 30205 30924 . + . ID=gene-AB11_RS05480;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AB11_RS05480;old_locus_tag=AB11_0787 NZ_JHDH01000102.1 Protein Homology CDS 30205 30924 . + 0 ID=cds-WP_000345410.1;Parent=gene-AB11_RS05480;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AB11_RS05480;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 30921 31862 . - . ID=gene-AB11_RS05485;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AB11_RS05485;old_locus_tag=AB11_0788 NZ_JHDH01000102.1 Protein Homology CDS 30921 31862 . - 0 ID=cds-WP_000951292.1;Parent=gene-AB11_RS05485;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AB11_RS05485;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 31976 32356 . - . ID=gene-AB11_RS05490;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AB11_RS05490;old_locus_tag=AB11_0789 NZ_JHDH01000102.1 Protein Homology CDS 31976 32356 . - 0 ID=cds-WP_000784351.1;Parent=gene-AB11_RS05490;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AB11_RS05490;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 32672 33724 . + . ID=gene-AB11_RS05495;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AB11_RS05495;old_locus_tag=AB11_0790 NZ_JHDH01000102.1 Protein Homology CDS 32672 33724 . + 0 ID=cds-WP_001109196.1;Parent=gene-AB11_RS05495;Dbxref=GenBank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AB11_RS05495;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 33882 34634 . - . ID=gene-AB11_RS05500;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AB11_RS05500;old_locus_tag=AB11_0791 NZ_JHDH01000102.1 Protein Homology CDS 33882 34634 . - 0 ID=cds-WP_001295305.1;Parent=gene-AB11_RS05500;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AB11_RS05500;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 34836 35876 . - . ID=gene-AB11_RS05505;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AB11_RS05505;old_locus_tag=AB11_0793 NZ_JHDH01000102.1 Protein Homology CDS 34836 35876 . - 0 ID=cds-WP_000931389.1;Parent=gene-AB11_RS05505;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AB11_RS05505;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 35870 37018 . - . ID=gene-AB11_RS05510;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AB11_RS05510;old_locus_tag=AB11_0794 NZ_JHDH01000102.1 Protein Homology CDS 35870 37018 . - 0 ID=cds-WP_000053415.1;Parent=gene-AB11_RS05510;Dbxref=GenBank:WP_000053415.1;Name=WP_000053415.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AB11_RS05510;product=galactokinase;protein_id=WP_000053415.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 37022 38068 . - . ID=gene-AB11_RS05515;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AB11_RS05515;old_locus_tag=AB11_0795 NZ_JHDH01000102.1 Protein Homology CDS 37022 38068 . - 0 ID=cds-WP_000191497.1;Parent=gene-AB11_RS05515;Dbxref=GenBank:WP_000191497.1;Name=WP_000191497.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AB11_RS05515;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 38078 39094 . - . ID=gene-AB11_RS05520;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AB11_RS05520;old_locus_tag=AB11_0796 NZ_JHDH01000102.1 Protein Homology CDS 38078 39094 . - 0 ID=cds-WP_001265438.1;Parent=gene-AB11_RS05520;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AB11_RS05520;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 39355 40827 . - . ID=gene-AB11_RS05525;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AB11_RS05525;old_locus_tag=AB11_0797 NZ_JHDH01000102.1 Protein Homology CDS 39355 40827 . - 0 ID=cds-WP_000096869.1;Parent=gene-AB11_RS05525;Dbxref=GenBank:WP_000096869.1;Name=WP_000096869.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AB11_RS05525;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096869.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 40895 41683 . - . ID=gene-AB11_RS05530;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AB11_RS05530;old_locus_tag=AB11_0798 NZ_JHDH01000102.1 Protein Homology CDS 40895 41683 . - 0 ID=cds-WP_001147439.1;Parent=gene-AB11_RS05530;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AB11_RS05530;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 41812 41961 . + . ID=gene-AB11_RS05535;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AB11_RS05535;old_locus_tag=AB11_0799 NZ_JHDH01000102.1 Protein Homology CDS 41812 41961 . + 0 ID=cds-WP_000891515.1;Parent=gene-AB11_RS05535;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AB11_RS05535;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 42128 42901 . + . ID=gene-AB11_RS05540;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AB11_RS05540;old_locus_tag=AB11_0800 NZ_JHDH01000102.1 Protein Homology CDS 42128 42901 . + 0 ID=cds-WP_000101984.1;Parent=gene-AB11_RS05540;Dbxref=GenBank:WP_000101984.1;Name=WP_000101984.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AB11_RS05540;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 42901 43590 . + . ID=gene-AB11_RS05545;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AB11_RS05545;old_locus_tag=AB11_0801 NZ_JHDH01000102.1 Protein Homology CDS 42901 43590 . + 0 ID=cds-WP_000604034.1;Parent=gene-AB11_RS05545;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AB11_RS05545;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 43593 44651 . + . ID=gene-AB11_RS05550;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AB11_RS05550;old_locus_tag=AB11_0802 NZ_JHDH01000102.1 Protein Homology CDS 43593 44651 . + 0 ID=cds-WP_000891692.1;Parent=gene-AB11_RS05550;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AB11_RS05550;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 44652 45470 . - . ID=gene-AB11_RS05555;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AB11_RS05555;old_locus_tag=AB11_0803 NZ_JHDH01000102.1 Protein Homology CDS 44652 45470 . - 0 ID=cds-WP_001300666.1;Parent=gene-AB11_RS05555;Dbxref=GenBank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AB11_RS05555;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 45625 46620 . + . ID=gene-AB11_RS05560;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AB11_RS05560;old_locus_tag=AB11_0804 NZ_JHDH01000102.1 Protein Homology CDS 45625 46620 . + 0 ID=cds-WP_000815435.1;Parent=gene-AB11_RS05560;Dbxref=GenBank:WP_000815435.1;Name=WP_000815435.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AB11_RS05560;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 46661 47614 . - . ID=gene-AB11_RS05565;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AB11_RS05565;old_locus_tag=AB11_0805 NZ_JHDH01000102.1 Protein Homology CDS 46661 47614 . - 0 ID=cds-WP_000679972.1;Parent=gene-AB11_RS05565;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AB11_RS05565;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 47798 48850 . + . ID=gene-AB11_RS05570;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AB11_RS05570;old_locus_tag=AB11_0807 NZ_JHDH01000102.1 Protein Homology CDS 47798 48850 . + 0 ID=cds-WP_000723652.1;Parent=gene-AB11_RS05570;Dbxref=GenBank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AB11_RS05570;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 48926 50392 . + . ID=gene-AB11_RS05575;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=AB11_RS05575;old_locus_tag=AB11_0808 NZ_JHDH01000102.1 Protein Homology CDS 48926 50392 . + 0 ID=cds-WP_349237176.1;Parent=gene-AB11_RS05575;Dbxref=GenBank:WP_349237176.1;Name=WP_349237176.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF013132.6;locus_tag=AB11_RS05575;product=anion permease;protein_id=WP_349237176.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 50504 52765 . + . ID=gene-AB11_RS05580;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AB11_RS05580;old_locus_tag=AB11_0809 NZ_JHDH01000102.1 Protein Homology CDS 50504 52765 . + 0 ID=cds-WP_000593938.1;Parent=gene-AB11_RS05580;Dbxref=GenBank:WP_000593938.1;Name=WP_000593938.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AB11_RS05580;product=hydratase;protein_id=WP_000593938.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 52999 54282 . - . ID=gene-AB11_RS05585;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AB11_RS05585;old_locus_tag=AB11_0810 NZ_JHDH01000102.1 Protein Homology CDS 52999 54282 . - 0 ID=cds-WP_001091569.1;Parent=gene-AB11_RS05585;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AB11_RS05585;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 54434 54910 . - . ID=gene-AB11_RS05590;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AB11_RS05590;old_locus_tag=AB11_0811 NZ_JHDH01000102.1 Protein Homology CDS 54434 54910 . - 0 ID=cds-WP_000767389.1;Parent=gene-AB11_RS05590;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AB11_RS05590;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 54969 56258 . - . ID=gene-AB11_RS05595;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AB11_RS05595;old_locus_tag=AB11_0812 NZ_JHDH01000102.1 Protein Homology CDS 54969 56258 . - 0 ID=cds-WP_001295303.1;Parent=gene-AB11_RS05595;Dbxref=GenBank:WP_001295303.1;Name=WP_001295303.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AB11_RS05595;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001295303.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 56345 57385 . + . ID=gene-AB11_RS05600;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AB11_RS05600;old_locus_tag=AB11_0813 NZ_JHDH01000102.1 Protein Homology CDS 56345 57385 . + 0 ID=cds-WP_000951213.1;Parent=gene-AB11_RS05600;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AB11_RS05600;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 57382 58536 . + . ID=gene-AB11_RS05605;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AB11_RS05605;old_locus_tag=AB11_0814 NZ_JHDH01000102.1 Protein Homology CDS 57382 58536 . + 0 ID=cds-WP_000118826.1;Parent=gene-AB11_RS05605;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AB11_RS05605;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 58523 59278 . + . ID=gene-AB11_RS05610;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AB11_RS05610;old_locus_tag=AB11_0815 NZ_JHDH01000102.1 Protein Homology CDS 58523 59278 . + 0 ID=cds-WP_000246761.1;Parent=gene-AB11_RS05610;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AB11_RS05610;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 59271 59948 . + . ID=gene-AB11_RS05615;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB11_RS05615;old_locus_tag=AB11_0816 NZ_JHDH01000102.1 Protein Homology CDS 59271 59948 . + 0 ID=cds-WP_021570724.1;Parent=gene-AB11_RS05615;Dbxref=GenBank:WP_021570724.1;Name=WP_021570724.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AB11_RS05615;product=dethiobiotin synthase;protein_id=WP_021570724.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 60527 62548 . + . ID=gene-AB11_RS05620;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AB11_RS05620;old_locus_tag=AB11_0817 NZ_JHDH01000102.1 Protein Homology CDS 60527 62548 . + 0 ID=cds-WP_000042533.1;Parent=gene-AB11_RS05620;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AB11_RS05620;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 62740 63648 . - . ID=gene-AB11_RS05625;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AB11_RS05625;old_locus_tag=AB11_0818 NZ_JHDH01000102.1 Protein Homology CDS 62740 63648 . - 0 ID=cds-WP_001295302.1;Parent=gene-AB11_RS05625;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AB11_RS05625;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JHDH01000102.1 cmsearch riboswitch 63913 64057 . + . ID=id-NZ_JHDH01000102.1:63913..64057;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000102.1 RefSeq gene 64045 65034 . + . ID=gene-AB11_RS05630;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AB11_RS05630;old_locus_tag=AB11_0819 NZ_JHDH01000102.1 Protein Homology CDS 64045 65034 . + 0 ID=cds-WP_032223100.1;Parent=gene-AB11_RS05630;Dbxref=GenBank:WP_032223100.1;Name=WP_032223100.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AB11_RS05630;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_032223100.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 65056 65568 . + . ID=gene-AB11_RS05635;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AB11_RS05635;old_locus_tag=AB11_0820 NZ_JHDH01000102.1 Protein Homology CDS 65056 65568 . + 0 ID=cds-WP_000084639.1;Parent=gene-AB11_RS05635;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AB11_RS05635;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 65571 66056 . + . ID=gene-AB11_RS05640;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AB11_RS05640;old_locus_tag=AB11_0821 NZ_JHDH01000102.1 Protein Homology CDS 65571 66056 . + 0 ID=cds-WP_032223102.1;Parent=gene-AB11_RS05640;Dbxref=GenBank:WP_032223102.1;Name=WP_032223102.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AB11_RS05640;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_032223102.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 66049 66294 . + . ID=gene-AB11_RS05645;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AB11_RS05645;old_locus_tag=AB11_0822 NZ_JHDH01000102.1 Protein Homology CDS 66049 66294 . + 0 ID=cds-WP_000598619.1;Parent=gene-AB11_RS05645;Dbxref=GenBank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AB11_RS05645;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 66296 66748 . + . ID=gene-AB11_RS05650;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AB11_RS05650;old_locus_tag=AB11_0823 NZ_JHDH01000102.1 Protein Homology CDS 66296 66748 . + 0 ID=cds-WP_000852296.1;Parent=gene-AB11_RS05650;Dbxref=GenBank:WP_000852296.1;Name=WP_000852296.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AB11_RS05650;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852296.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 66885 67589 . + . ID=gene-AB11_RS05655;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AB11_RS05655;old_locus_tag=AB11_0824 NZ_JHDH01000102.1 Protein Homology CDS 66885 67589 . + 0 ID=cds-WP_000373624.1;Parent=gene-AB11_RS05655;Dbxref=GenBank:WP_000373624.1;Name=WP_000373624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AB11_RS05655;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 67794 68507 . + . ID=gene-AB11_RS05660;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AB11_RS05660;old_locus_tag=AB11_0825 NZ_JHDH01000102.1 Protein Homology CDS 67794 68507 . + 0 ID=cds-WP_000446917.1;Parent=gene-AB11_RS05660;Dbxref=GenBank:WP_000446917.1;Name=WP_000446917.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AB11_RS05660;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446917.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 68543 69499 . - . ID=gene-AB11_RS05665;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AB11_RS05665;old_locus_tag=AB11_0826 NZ_JHDH01000102.1 Protein Homology CDS 68543 69499 . - 0 ID=cds-WP_000045450.1;Parent=gene-AB11_RS05665;Dbxref=GenBank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AB11_RS05665;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045450.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 69499 70740 . - . ID=gene-AB11_RS05670;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AB11_RS05670;old_locus_tag=AB11_0827 NZ_JHDH01000102.1 Protein Homology CDS 69499 70740 . - 0 ID=cds-WP_000650337.1;Parent=gene-AB11_RS05670;Dbxref=GenBank:WP_000650337.1;Name=WP_000650337.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AB11_RS05670;product=cardiolipin synthase ClsB;protein_id=WP_000650337.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 70737 71498 . - . ID=gene-AB11_RS05675;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AB11_RS05675;old_locus_tag=AB11_0828 NZ_JHDH01000102.1 Protein Homology CDS 70737 71498 . - 0 ID=cds-WP_001643226.1;Parent=gene-AB11_RS05675;Dbxref=GenBank:WP_001643226.1;Name=WP_001643226.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AB11_RS05675;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001643226.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 71631 72041 . + . ID=gene-AB11_RS05680;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AB11_RS05680;old_locus_tag=AB11_0829 NZ_JHDH01000102.1 Protein Homology CDS 71631 72041 . + 0 ID=cds-WP_000871982.1;Parent=gene-AB11_RS05680;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AB11_RS05680;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 72003 73109 . - . ID=gene-AB11_RS05685;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AB11_RS05685;old_locus_tag=AB11_0830 NZ_JHDH01000102.1 Protein Homology CDS 72003 73109 . - 0 ID=cds-WP_000469031.1;Parent=gene-AB11_RS05685;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AB11_RS05685;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 73120 74253 . - . ID=gene-AB11_RS05690;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AB11_RS05690;old_locus_tag=AB11_0831 NZ_JHDH01000102.1 Protein Homology CDS 73120 74253 . - 0 ID=cds-WP_000070131.1;Parent=gene-AB11_RS05690;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AB11_RS05690;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 74246 75982 . - . ID=gene-AB11_RS05695;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AB11_RS05695;old_locus_tag=AB11_0832 NZ_JHDH01000102.1 Protein Homology CDS 74246 75982 . - 0 ID=cds-WP_001336077.1;Parent=gene-AB11_RS05695;Dbxref=GenBank:WP_001336077.1;Name=WP_001336077.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AB11_RS05695;product=ATP-binding cassette domain-containing protein;protein_id=WP_001336077.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 75975 76970 . - . ID=gene-AB11_RS05700;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AB11_RS05700;old_locus_tag=AB11_0833 NZ_JHDH01000102.1 Protein Homology CDS 75975 76970 . - 0 ID=cds-WP_000743444.1;Parent=gene-AB11_RS05700;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AB11_RS05700;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 76973 77644 . - . ID=gene-AB11_RS05705;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AB11_RS05705;old_locus_tag=AB11_0834 NZ_JHDH01000102.1 Protein Homology CDS 76973 77644 . - 0 ID=cds-WP_001296991.1;Parent=gene-AB11_RS05705;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AB11_RS05705;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 77873 79237 . + . ID=gene-AB11_RS05710;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AB11_RS05710;old_locus_tag=AB11_0835 NZ_JHDH01000102.1 Protein Homology CDS 77873 79237 . + 0 ID=cds-WP_000007101.1;Parent=gene-AB11_RS05710;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AB11_RS05710;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 79469 79951 . - . ID=gene-AB11_RS05715;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AB11_RS05715;old_locus_tag=AB11_0836 NZ_JHDH01000102.1 Protein Homology CDS 79469 79951 . - 0 ID=cds-WP_001145126.1;Parent=gene-AB11_RS05715;Dbxref=GenBank:WP_001145126.1;Name=WP_001145126.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AB11_RS05715;product=N-glycosidase YbiA;protein_id=WP_001145126.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 80071 82221 . + . ID=gene-AB11_RS05720;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AB11_RS05720;old_locus_tag=AB11_0837 NZ_JHDH01000102.1 Protein Homology CDS 80071 82221 . + 0 ID=cds-WP_001340191.1;Parent=gene-AB11_RS05720;Dbxref=GenBank:WP_001340191.1;Name=WP_001340191.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AB11_RS05720;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 82249 83211 . + . ID=gene-AB11_RS05725;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AB11_RS05725;old_locus_tag=AB11_0838 NZ_JHDH01000102.1 Protein Homology CDS 82249 83211 . + 0 ID=cds-WP_000386551.1;Parent=gene-AB11_RS05725;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AB11_RS05725;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 83352 84437 . + . ID=gene-AB11_RS05730;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AB11_RS05730;old_locus_tag=AB11_0839 NZ_JHDH01000102.1 Protein Homology CDS 83352 84437 . + 0 ID=cds-WP_000443530.1;Parent=gene-AB11_RS05730;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AB11_RS05730;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 84504 84563 . + . ID=gene-AB11_RS25285;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AB11_RS25285 NZ_JHDH01000102.1 Protein Homology CDS 84504 84563 . + 0 ID=cds-WP_211180490.1;Parent=gene-AB11_RS25285;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AB11_RS25285;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 84666 84926 . - . ID=gene-AB11_RS05735;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AB11_RS05735;old_locus_tag=AB11_0840 NZ_JHDH01000102.1 Protein Homology CDS 84666 84926 . - 0 ID=cds-WP_000849301.1;Parent=gene-AB11_RS05735;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AB11_RS05735;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 85191 85457 . - . ID=gene-AB11_RS05740;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AB11_RS05740;old_locus_tag=AB11_0841 NZ_JHDH01000102.1 Protein Homology CDS 85191 85457 . - 0 ID=cds-WP_000146343.1;Parent=gene-AB11_RS05740;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AB11_RS05740;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 85531 86208 . - . ID=gene-AB11_RS05745;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AB11_RS05745;old_locus_tag=AB11_0842 NZ_JHDH01000102.1 Protein Homology CDS 85531 86208 . - 0 ID=cds-WP_000990177.1;Parent=gene-AB11_RS05745;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AB11_RS05745;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 86250 88532 . - . ID=gene-AB11_RS05750;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AB11_RS05750;old_locus_tag=AB11_0843 NZ_JHDH01000102.1 Protein Homology CDS 86250 88532 . - 0 ID=cds-WP_000430057.1;Parent=gene-AB11_RS05750;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AB11_RS05750;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 88797 89057 . - . ID=gene-AB11_RS05755;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AB11_RS05755;old_locus_tag=AB11_0844 NZ_JHDH01000102.1 Protein Homology CDS 88797 89057 . - 0 ID=cds-WP_000710619.1;Parent=gene-AB11_RS05755;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AB11_RS05755;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 89333 90259 . + . ID=gene-AB11_RS05760;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AB11_RS05760;old_locus_tag=AB11_0845 NZ_JHDH01000102.1 Protein Homology CDS 89333 90259 . + 0 ID=cds-WP_001295299.1;Parent=gene-AB11_RS05760;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AB11_RS05760;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 90256 92481 . - . ID=gene-AB11_RS05765;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AB11_RS05765;old_locus_tag=AB11_0846 NZ_JHDH01000102.1 Protein Homology CDS 90256 92481 . - 0 ID=cds-WP_001267253.1;Parent=gene-AB11_RS05765;Dbxref=GenBank:WP_001267253.1;Name=WP_001267253.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AB11_RS05765;product=mechanosensitive channel protein;protein_id=WP_001267253.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 92742 93464 . - . ID=gene-AB11_RS05770;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AB11_RS05770;old_locus_tag=AB11_0847 NZ_JHDH01000102.1 Protein Homology CDS 92742 93464 . - 0 ID=cds-WP_000569083.1;Parent=gene-AB11_RS05770;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AB11_RS05770;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 93461 94120 . - . ID=gene-AB11_RS05775;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AB11_RS05775;old_locus_tag=AB11_0848 NZ_JHDH01000102.1 Protein Homology CDS 93461 94120 . - 0 ID=cds-WP_001159065.1;Parent=gene-AB11_RS05775;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AB11_RS05775;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 94259 95005 . - . ID=gene-AB11_RS05780;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AB11_RS05780;old_locus_tag=AB11_0849 NZ_JHDH01000102.1 Protein Homology CDS 94259 95005 . - 0 ID=cds-WP_000843866.1;Parent=gene-AB11_RS05780;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AB11_RS05780;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 95409 95912 . - . ID=gene-AB11_RS05785;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AB11_RS05785;old_locus_tag=AB11_0850 NZ_JHDH01000102.1 Protein Homology CDS 95409 95912 . - 0 ID=cds-WP_000100800.1;Parent=gene-AB11_RS05785;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AB11_RS05785;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 96211 97098 . - . ID=gene-AB11_RS05790;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AB11_RS05790;old_locus_tag=AB11_0851 NZ_JHDH01000102.1 Protein Homology CDS 96211 97098 . - 0 ID=cds-WP_001295297.1;Parent=gene-AB11_RS05790;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AB11_RS05790;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 97333 97398 . + . ID=gene-AB11_RS05795;Name=AB11_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS05795 NZ_JHDH01000102.1 Protein Homology CDS 97333 97398 . + 0 ID=cds-WP_120795379.1;Parent=gene-AB11_RS05795;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AB11_RS05795;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 97451 97966 . + . ID=gene-AB11_RS05800;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AB11_RS05800;old_locus_tag=AB11_0852 NZ_JHDH01000102.1 Protein Homology CDS 97451 97966 . + 0 ID=cds-WP_001295296.1;Parent=gene-AB11_RS05800;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AB11_RS05800;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 98015 99598 . - . ID=gene-AB11_RS05805;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AB11_RS05805;old_locus_tag=AB11_0853 NZ_JHDH01000102.1 Protein Homology CDS 98015 99598 . - 0 ID=cds-WP_001054678.1;Parent=gene-AB11_RS05805;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AB11_RS05805;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 99870 99998 . - . ID=gene-AB11_RS05810;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AB11_RS05810;old_locus_tag=AB11_0854 NZ_JHDH01000102.1 Protein Homology CDS 99870 99998 . - 0 ID=cds-WP_001001761.1;Parent=gene-AB11_RS05810;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AB11_RS05810;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 100184 100651 . + . ID=gene-AB11_RS05815;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AB11_RS05815;old_locus_tag=AB11_0855 NZ_JHDH01000102.1 Protein Homology CDS 100184 100651 . + 0 ID=cds-WP_000091016.1;Parent=gene-AB11_RS05815;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AB11_RS05815;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 100648 101766 . + . ID=gene-AB11_RS05820;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AB11_RS05820;old_locus_tag=AB11_0856 NZ_JHDH01000102.1 Protein Homology CDS 100648 101766 . + 0 ID=cds-WP_000056457.1;Parent=gene-AB11_RS05820;Dbxref=GenBank:WP_000056457.1;Name=WP_000056457.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AB11_RS05820;product=anion transporter;protein_id=WP_000056457.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 101825 102745 . - . ID=gene-AB11_RS05825;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AB11_RS05825;old_locus_tag=AB11_0857 NZ_JHDH01000102.1 Protein Homology CDS 101825 102745 . - 0 ID=cds-WP_001056384.1;Parent=gene-AB11_RS05825;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AB11_RS05825;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 102964 104556 . + . ID=gene-AB11_RS05830;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AB11_RS05830;old_locus_tag=AB11_0858 NZ_JHDH01000102.1 Protein Homology CDS 102964 104556 . + 0 ID=cds-WP_000961458.1;Parent=gene-AB11_RS05830;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AB11_RS05830;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 104797 106062 . - . ID=gene-AB11_RS05835;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AB11_RS05835;old_locus_tag=AB11_0859 NZ_JHDH01000102.1 Protein Homology CDS 104797 106062 . - 0 ID=cds-WP_000168797.1;Parent=gene-AB11_RS05835;Dbxref=GenBank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AB11_RS05835;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 106214 107029 . - . ID=gene-AB11_RS05840;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AB11_RS05840;old_locus_tag=AB11_0860 NZ_JHDH01000102.1 Protein Homology CDS 106214 107029 . - 0 ID=cds-WP_000114272.1;Parent=gene-AB11_RS05840;Dbxref=GenBank:WP_000114272.1;Name=WP_000114272.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415343.1;locus_tag=AB11_RS05840;product=sugar-phosphatase YbiV;protein_id=WP_000114272.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 107175 109607 . - . ID=gene-AB11_RS05845;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AB11_RS05845;old_locus_tag=AB11_0861 NZ_JHDH01000102.1 Protein Homology CDS 107175 109607 . - 0 ID=cds-WP_032223105.1;Parent=gene-AB11_RS05845;Dbxref=GenBank:WP_032223105.1;Name=WP_032223105.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AB11_RS05845;product=glycyl radical protein;protein_id=WP_032223105.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 109613 110512 . - . ID=gene-AB11_RS05850;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AB11_RS05850;old_locus_tag=AB11_0862 NZ_JHDH01000102.1 Protein Homology CDS 109613 110512 . - 0 ID=cds-WP_001295295.1;Parent=gene-AB11_RS05850;Dbxref=GenBank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AB11_RS05850;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 110643 111305 . + . ID=gene-AB11_RS05855;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB11_RS05855;old_locus_tag=AB11_0863 NZ_JHDH01000102.1 Protein Homology CDS 110643 111305 . + 0 ID=cds-WP_001336208.1;Parent=gene-AB11_RS05855;Dbxref=GenBank:WP_001336208.1;Name=WP_001336208.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AB11_RS05855;product=fructose-6-phosphate aldolase;protein_id=WP_001336208.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 111381 112130 . - . ID=gene-AB11_RS05860;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AB11_RS05860;old_locus_tag=AB11_0864 NZ_JHDH01000102.1 Protein Homology CDS 111381 112130 . - 0 ID=cds-WP_000829217.1;Parent=gene-AB11_RS05860;Dbxref=GenBank:WP_000829217.1;Name=WP_000829217.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415347.1;locus_tag=AB11_RS05860;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829217.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 112130 113365 . - . ID=gene-AB11_RS05865;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AB11_RS05865;old_locus_tag=AB11_0865 NZ_JHDH01000102.1 Protein Homology CDS 112130 113365 . - 0 ID=cds-WP_000397340.1;Parent=gene-AB11_RS05865;Dbxref=GenBank:WP_000397340.1;Name=WP_000397340.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AB11_RS05865;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397340.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 113569 114534 . + . ID=gene-AB11_RS05870;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AB11_RS05870;old_locus_tag=AB11_0866 NZ_JHDH01000102.1 Protein Homology CDS 113569 114534 . + 0 ID=cds-WP_000513775.1;Parent=gene-AB11_RS05870;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AB11_RS05870;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 114521 116392 . + . ID=gene-AB11_RS05875;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AB11_RS05875;old_locus_tag=AB11_0867 NZ_JHDH01000102.1 Protein Homology CDS 114521 116392 . + 0 ID=cds-WP_001301279.1;Parent=gene-AB11_RS05875;Dbxref=GenBank:WP_001301279.1;Name=WP_001301279.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AB11_RS05875;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001301279.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 116412 117950 . + . ID=gene-AB11_RS05880;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AB11_RS05880;old_locus_tag=AB11_0868 NZ_JHDH01000102.1 Protein Homology CDS 116412 117950 . + 0 ID=cds-WP_000090140.1;Parent=gene-AB11_RS05880;Dbxref=GenBank:WP_000090140.1;Name=WP_000090140.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415351.1;locus_tag=AB11_RS05880;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090140.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 117968 118888 . + . ID=gene-AB11_RS05885;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AB11_RS05885;old_locus_tag=AB11_0869 NZ_JHDH01000102.1 Protein Homology CDS 117968 118888 . + 0 ID=cds-WP_000936043.1;Parent=gene-AB11_RS05885;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AB11_RS05885;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 118891 119802 . + . ID=gene-AB11_RS05890;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AB11_RS05890;old_locus_tag=AB11_0870 NZ_JHDH01000102.1 Protein Homology CDS 118891 119802 . + 0 ID=cds-WP_001236051.1;Parent=gene-AB11_RS05890;Dbxref=GenBank:WP_001236051.1;Name=WP_001236051.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415353.1;locus_tag=AB11_RS05890;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236051.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 119980 122328 . + . ID=gene-AB11_RS05895;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AB11_RS05895;old_locus_tag=AB11_0871 NZ_JHDH01000102.1 Protein Homology CDS 119980 122328 . + 0 ID=cds-WP_001459603.1;Parent=gene-AB11_RS05895;Dbxref=GenBank:WP_001459603.1;Name=WP_001459603.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AB11_RS05895;product=sensor domain-containing phosphodiesterase;protein_id=WP_001459603.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 122336 123664 . + . ID=gene-AB11_RS05900;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AB11_RS05900;old_locus_tag=AB11_0872 NZ_JHDH01000102.1 Protein Homology CDS 122336 123664 . + 0 ID=cds-WP_000086904.1;Parent=gene-AB11_RS05900;Dbxref=GenBank:WP_000086904.1;Name=WP_000086904.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415355.1;locus_tag=AB11_RS05900;product=GGDEF domain-containing protein;protein_id=WP_000086904.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 123711 125036 . - . ID=gene-AB11_RS05905;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AB11_RS05905;old_locus_tag=AB11_0873 NZ_JHDH01000102.1 Protein Homology CDS 123711 125036 . - 0 ID=cds-WP_000049367.1;Parent=gene-AB11_RS05905;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AB11_RS05905;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 125249 125632 . + . ID=gene-AB11_RS05910;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AB11_RS05910;old_locus_tag=AB11_0874 NZ_JHDH01000102.1 Protein Homology CDS 125249 125632 . + 0 ID=cds-WP_000497137.1;Parent=gene-AB11_RS05910;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AB11_RS05910;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 125743 126858 . + . ID=gene-AB11_RS05915;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AB11_RS05915;old_locus_tag=AB11_0875 NZ_JHDH01000102.1 Protein Homology CDS 125743 126858 . + 0 ID=cds-WP_000554946.1;Parent=gene-AB11_RS05915;Dbxref=GenBank:WP_000554946.1;Name=WP_000554946.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308944.1;locus_tag=AB11_RS05915;product=aldose sugar dehydrogenase YliI;protein_id=WP_000554946.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 126855 127481 . - . ID=gene-AB11_RS05920;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AB11_RS05920;old_locus_tag=AB11_0876 NZ_JHDH01000102.1 Protein Homology CDS 126855 127481 . - 0 ID=cds-WP_001295292.1;Parent=gene-AB11_RS05920;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AB11_RS05920;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 127728 128930 . + . ID=gene-AB11_RS05925;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AB11_RS05925;old_locus_tag=AB11_0877 NZ_JHDH01000102.1 Protein Homology CDS 127728 128930 . + 0 ID=cds-WP_001300708.1;Parent=gene-AB11_RS05925;Dbxref=GenBank:WP_001300708.1;Name=WP_001300708.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415360.1;locus_tag=AB11_RS05925;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001300708.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 128977 129735 . - . ID=gene-AB11_RS05930;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AB11_RS05930;old_locus_tag=AB11_0878 NZ_JHDH01000102.1 Protein Homology CDS 128977 129735 . - 0 ID=cds-WP_000450121.1;Parent=gene-AB11_RS05930;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AB11_RS05930;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 129793 130389 . - . ID=gene-AB11_RS05935;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AB11_RS05935;old_locus_tag=AB11_0879 NZ_JHDH01000102.1 Protein Homology CDS 129793 130389 . - 0 ID=cds-WP_001295291.1;Parent=gene-AB11_RS05935;Dbxref=GenBank:WP_001295291.1;Name=WP_001295291.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AB11_RS05935;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 130674 131906 . + . ID=gene-AB11_RS05940;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AB11_RS05940;old_locus_tag=AB11_0880 NZ_JHDH01000102.1 Protein Homology CDS 130674 131906 . + 0 ID=cds-WP_001180089.1;Parent=gene-AB11_RS05940;Dbxref=GenBank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AB11_RS05940;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180089.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 131947 132231 . - . ID=gene-AB11_RS05945;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AB11_RS05945;old_locus_tag=AB11_0881 NZ_JHDH01000102.1 Protein Homology CDS 131947 132231 . - 0 ID=cds-WP_000480892.1;Parent=gene-AB11_RS05945;Dbxref=GenBank:WP_000480892.1;Name=WP_000480892.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AB11_RS05945;product=protein YbjH;protein_id=WP_000480892.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 132317 133132 . - . ID=gene-AB11_RS05950;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AB11_RS05950;old_locus_tag=AB11_0882 NZ_JHDH01000102.1 Protein Homology CDS 132317 133132 . - 0 ID=cds-WP_000023564.1;Parent=gene-AB11_RS05950;Dbxref=GenBank:WP_000023564.1;Name=WP_000023564.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AB11_RS05950;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_000023564.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 133132 134340 . - . ID=gene-AB11_RS05955;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AB11_RS05955;old_locus_tag=AB11_0883 NZ_JHDH01000102.1 Protein Homology CDS 133132 134340 . - 0 ID=cds-WP_000217859.1;Parent=gene-AB11_RS05955;Dbxref=GenBank:WP_000217859.1;Name=WP_000217859.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AB11_RS05955;product=MFS transporter;protein_id=WP_000217859.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 134424 134960 . + . ID=gene-AB11_RS05960;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AB11_RS05960;old_locus_tag=AB11_0884 NZ_JHDH01000102.1 Protein Homology CDS 134424 134960 . + 0 ID=cds-WP_001295289.1;Parent=gene-AB11_RS05960;Dbxref=GenBank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AB11_RS05960;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 135135 136820 . - . ID=gene-AB11_RS05965;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AB11_RS05965;old_locus_tag=AB11_0885 NZ_JHDH01000102.1 Protein Homology CDS 135135 136820 . - 0 ID=cds-WP_001024876.1;Parent=gene-AB11_RS05965;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AB11_RS05965;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 137090 137467 . + . ID=gene-AB11_RS05970;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AB11_RS05970;old_locus_tag=AB11_0886 NZ_JHDH01000102.1 Protein Homology CDS 137090 137467 . + 0 ID=cds-WP_000681108.1;Parent=gene-AB11_RS05970;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AB11_RS05970;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 137497 137754 . - . ID=gene-AB11_RS05975;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AB11_RS05975;old_locus_tag=AB11_0887 NZ_JHDH01000102.1 Protein Homology CDS 137497 137754 . - 0 ID=cds-WP_001195240.1;Parent=gene-AB11_RS05975;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AB11_RS05975;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 137914 138201 . + . ID=gene-AB11_RS05980;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AB11_RS05980;old_locus_tag=AB11_0888 NZ_JHDH01000102.1 Protein Homology CDS 137914 138201 . + 0 ID=cds-WP_001201560.1;Parent=gene-AB11_RS05980;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AB11_RS05980;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 138185 138907 . + . ID=gene-AB11_RS05985;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AB11_RS05985;old_locus_tag=AB11_0889 NZ_JHDH01000102.1 Protein Homology CDS 138185 138907 . + 0 ID=cds-WP_000189159.1;Parent=gene-AB11_RS05985;Dbxref=GenBank:WP_000189159.1;Name=WP_000189159.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AB11_RS05985;product=nitroreductase NfsA;protein_id=WP_000189159.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 138968 139870 . + . ID=gene-AB11_RS05990;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AB11_RS05990;old_locus_tag=AB11_0890 NZ_JHDH01000102.1 Protein Homology CDS 138968 139870 . + 0 ID=cds-WP_032223108.1;Parent=gene-AB11_RS05990;Dbxref=GenBank:WP_032223108.1;Name=WP_032223108.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AB11_RS05990;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_032223108.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 139958 140434 . + . ID=gene-AB11_RS05995;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AB11_RS05995;old_locus_tag=AB11_0891 NZ_JHDH01000102.1 Protein Homology CDS 139958 140434 . + 0 ID=cds-WP_000203025.1;Parent=gene-AB11_RS05995;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AB11_RS05995;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 140785 141897 . + . ID=gene-AB11_RS06000;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AB11_RS06000;old_locus_tag=AB11_0894 NZ_JHDH01000102.1 Protein Homology CDS 140785 141897 . + 0 ID=cds-WP_000126073.1;Parent=gene-AB11_RS06000;Dbxref=GenBank:WP_000126073.1;Name=WP_000126073.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AB11_RS06000;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126073.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 141992 143125 . + . ID=gene-AB11_RS06005;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AB11_RS06005;old_locus_tag=AB11_0895 NZ_JHDH01000102.1 Protein Homology CDS 141992 143125 . + 0 ID=cds-WP_000996005.1;Parent=gene-AB11_RS06005;Dbxref=GenBank:WP_000996005.1;Name=WP_000996005.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AB11_RS06005;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 143135 144088 . + . ID=gene-AB11_RS06010;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AB11_RS06010;old_locus_tag=AB11_0896 NZ_JHDH01000102.1 Protein Homology CDS 143135 144088 . + 0 ID=cds-WP_001093854.1;Parent=gene-AB11_RS06010;Dbxref=GenBank:WP_001093854.1;Name=WP_001093854.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706736.1;locus_tag=AB11_RS06010;product=putrescine ABC transporter permease PotH;protein_id=WP_001093854.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 144085 144930 . + . ID=gene-AB11_RS06015;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AB11_RS06015;old_locus_tag=AB11_0897 NZ_JHDH01000102.1 Protein Homology CDS 144085 144930 . + 0 ID=cds-WP_001061665.1;Parent=gene-AB11_RS06015;Dbxref=GenBank:WP_001061665.1;Name=WP_001061665.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AB11_RS06015;product=putrescine ABC transporter permease PotI;protein_id=WP_001061665.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 144990 145478 . + . ID=gene-AB11_RS06020;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AB11_RS06020;old_locus_tag=AB11_0898 NZ_JHDH01000102.1 Protein Homology CDS 144990 145478 . + 0 ID=cds-WP_000389260.1;Parent=gene-AB11_RS06020;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AB11_RS06020;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 145519 146646 . + . ID=gene-AB11_RS06025;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AB11_RS06025;old_locus_tag=AB11_0899 NZ_JHDH01000102.1 Protein Homology CDS 145519 146646 . + 0 ID=cds-WP_001149756.1;Parent=gene-AB11_RS06025;Dbxref=GenBank:WP_001149756.1;Name=WP_001149756.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415380.1;locus_tag=AB11_RS06025;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149756.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 146845 147576 . - . ID=gene-AB11_RS06030;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AB11_RS06030;old_locus_tag=AB11_0900 NZ_JHDH01000102.1 Protein Homology CDS 146845 147576 . - 0 ID=cds-WP_001295339.1;Parent=gene-AB11_RS06030;Dbxref=GenBank:WP_001295339.1;Name=WP_001295339.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AB11_RS06030;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295339.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 147867 148535 . - . ID=gene-AB11_RS06035;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AB11_RS06035;old_locus_tag=AB11_0901 NZ_JHDH01000102.1 Protein Homology CDS 147867 148535 . - 0 ID=cds-WP_000464491.1;Parent=gene-AB11_RS06035;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AB11_RS06035;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 148535 149251 . - . ID=gene-AB11_RS06040;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AB11_RS06040;old_locus_tag=AB11_0902 NZ_JHDH01000102.1 Protein Homology CDS 148535 149251 . - 0 ID=cds-WP_001001691.1;Parent=gene-AB11_RS06040;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AB11_RS06040;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 149258 149989 . - . ID=gene-AB11_RS06045;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AB11_RS06045;old_locus_tag=AB11_0903 NZ_JHDH01000102.1 Protein Homology CDS 149258 149989 . - 0 ID=cds-WP_000756569.1;Parent=gene-AB11_RS06045;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AB11_RS06045;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 150007 150735 . - . ID=gene-AB11_RS06050;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AB11_RS06050;old_locus_tag=AB11_0904 NZ_JHDH01000102.1 Protein Homology CDS 150007 150735 . - 0 ID=cds-WP_000027205.1;Parent=gene-AB11_RS06050;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AB11_RS06050;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 150953 151468 . - . ID=gene-AB11_RS06055;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AB11_RS06055;old_locus_tag=AB11_0905 NZ_JHDH01000102.1 Protein Homology CDS 150953 151468 . - 0 ID=cds-WP_001270734.1;Parent=gene-AB11_RS06055;Dbxref=GenBank:WP_001270734.1;Name=WP_001270734.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AB11_RS06055;product=lipoprotein;protein_id=WP_001270734.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 151594 151917 . + . ID=gene-AB11_RS06060;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AB11_RS06060;old_locus_tag=AB11_0906 NZ_JHDH01000102.1 Protein Homology CDS 151594 151917 . + 0 ID=cds-WP_001160737.1;Parent=gene-AB11_RS06060;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AB11_RS06060;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 151914 152744 . + . ID=gene-AB11_RS06065;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AB11_RS06065;old_locus_tag=AB11_0907 NZ_JHDH01000102.1 Protein Homology CDS 151914 152744 . + 0 ID=cds-WP_001252135.1;Parent=gene-AB11_RS06065;Dbxref=GenBank:WP_001252135.1;Name=WP_001252135.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AB11_RS06065;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001252135.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 152741 153754 . - . ID=gene-AB11_RS06070;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AB11_RS06070;old_locus_tag=AB11_0908 NZ_JHDH01000102.1 Protein Homology CDS 152741 153754 . - 0 ID=cds-WP_001338420.1;Parent=gene-AB11_RS06070;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AB11_RS06070;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 153853 155283 . - . ID=gene-AB11_RS06075;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AB11_RS06075;old_locus_tag=AB11_0909 NZ_JHDH01000102.1 Protein Homology CDS 153853 155283 . - 0 ID=cds-WP_001136577.1;Parent=gene-AB11_RS06075;Dbxref=GenBank:WP_001136577.1;Name=WP_001136577.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AB11_RS06075;product=SDR family oxidoreductase;protein_id=WP_001136577.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 155294 156295 . - . ID=gene-AB11_RS06080;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AB11_RS06080;old_locus_tag=AB11_0910 NZ_JHDH01000102.1 Protein Homology CDS 155294 156295 . - 0 ID=cds-WP_000566372.1;Parent=gene-AB11_RS06080;Dbxref=GenBank:WP_000566372.1;Name=WP_000566372.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=AB11_RS06080;product=low-specificity L-threonine aldolase;protein_id=WP_000566372.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 156332 158050 . - . ID=gene-AB11_RS06085;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AB11_RS06085;old_locus_tag=AB11_0911 NZ_JHDH01000102.1 Protein Homology CDS 156332 158050 . - 0 ID=cds-WP_000815337.1;Parent=gene-AB11_RS06085;Dbxref=GenBank:WP_000815337.1;Name=WP_000815337.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AB11_RS06085;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815337.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 158183 159151 . - . ID=gene-AB11_RS06090;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AB11_RS06090;old_locus_tag=AB11_0912 NZ_JHDH01000102.1 Protein Homology CDS 158183 159151 . - 0 ID=cds-WP_000178677.1;Parent=gene-AB11_RS06090;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AB11_RS06090;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 159163 160815 . - . ID=gene-AB11_RS06095;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AB11_RS06095;old_locus_tag=AB11_0913 NZ_JHDH01000102.1 Protein Homology CDS 159163 160815 . - 0 ID=cds-WP_000458809.1;Parent=gene-AB11_RS06095;Dbxref=GenBank:WP_000458809.1;Name=WP_000458809.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AB11_RS06095;product=hydroxylamine reductase;protein_id=WP_000458809.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 160959 161858 . - . ID=gene-AB11_RS06100;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AB11_RS06100;old_locus_tag=AB11_0914 NZ_JHDH01000102.1 Protein Homology CDS 160959 161858 . - 0 ID=cds-WP_000491142.1;Parent=gene-AB11_RS06100;Dbxref=GenBank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AB11_RS06100;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 162353 163048 . - . ID=gene-AB11_RS06105;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AB11_RS06105;old_locus_tag=AB11_0915 NZ_JHDH01000102.1 Protein Homology CDS 162353 163048 . - 0 ID=cds-WP_001298299.1;Parent=gene-AB11_RS06105;Dbxref=GenBank:WP_001298299.1;Name=WP_001298299.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AB11_RS06105;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 163474 165132 . + . ID=gene-AB11_RS06110;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AB11_RS06110;old_locus_tag=AB11_0916 NZ_JHDH01000102.1 Protein Homology CDS 163474 165132 . + 0 ID=cds-WP_000599802.1;Parent=gene-AB11_RS06110;Dbxref=GenBank:WP_000599802.1;Name=WP_000599802.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AB11_RS06110;product=ATP-dependent endonuclease;protein_id=WP_000599802.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 165129 166085 . - . ID=gene-AB11_RS06115;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AB11_RS06115;old_locus_tag=AB11_0917 NZ_JHDH01000102.1 Protein Homology CDS 165129 166085 . - 0 ID=cds-WP_001380339.1;Parent=gene-AB11_RS06115;Dbxref=GenBank:WP_001380339.1;Name=WP_001380339.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AB11_RS06115;product=VirK/YbjX family protein;protein_id=WP_001380339.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 166236 167351 . + . ID=gene-AB11_RS06120;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AB11_RS06120;old_locus_tag=AB11_0918 NZ_JHDH01000102.1 Protein Homology CDS 166236 167351 . + 0 ID=cds-WP_032223111.1;Parent=gene-AB11_RS06120;Dbxref=GenBank:WP_032223111.1;Name=WP_032223111.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415399.4;locus_tag=AB11_RS06120;product=macrolide transporter subunit MacA;protein_id=WP_032223111.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 167348 169294 . + . ID=gene-AB11_RS06125;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AB11_RS06125;old_locus_tag=AB11_0919 NZ_JHDH01000102.1 Protein Homology CDS 167348 169294 . + 0 ID=cds-WP_032223114.1;Parent=gene-AB11_RS06125;Dbxref=GenBank:WP_032223114.1;Name=WP_032223114.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415400.1;locus_tag=AB11_RS06125;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_032223114.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 169367 169591 . - . ID=gene-AB11_RS06130;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AB11_RS06130;old_locus_tag=AB11_0920 NZ_JHDH01000102.1 Protein Homology CDS 169367 169591 . - 0 ID=cds-WP_000410785.1;Parent=gene-AB11_RS06130;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AB11_RS06130;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 169741 169815 . + . ID=gene-AB11_RS25290;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AB11_RS25290 NZ_JHDH01000102.1 Protein Homology CDS 169741 169815 . + 0 ID=cds-WP_001406719.1;Parent=gene-AB11_RS25290;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AB11_RS25290;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 169914 170234 . + . ID=gene-AB11_RS06135;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AB11_RS06135;old_locus_tag=AB11_0921 NZ_JHDH01000102.1 Protein Homology CDS 169914 170234 . + 0 ID=cds-WP_000520781.1;Parent=gene-AB11_RS06135;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AB11_RS06135;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 170265 172541 . + . ID=gene-AB11_RS06140;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AB11_RS06140;old_locus_tag=AB11_0922 NZ_JHDH01000102.1 Protein Homology CDS 170265 172541 . + 0 ID=cds-WP_000934041.1;Parent=gene-AB11_RS06140;Dbxref=GenBank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AB11_RS06140;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 172885 172972 . - . ID=gene-AB11_RS06145;Name=AB11_RS06145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS06145;old_locus_tag=AB11_0923 NZ_JHDH01000102.1 tRNAscan-SE tRNA 172885 172972 . - . ID=rna-AB11_RS06145;Parent=gene-AB11_RS06145;anticodon=(pos:complement(172936..172938));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06145;product=tRNA-Ser NZ_JHDH01000102.1 tRNAscan-SE exon 172885 172972 . - . ID=exon-AB11_RS06145-1;Parent=rna-AB11_RS06145;anticodon=(pos:complement(172936..172938));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06145;product=tRNA-Ser NZ_JHDH01000102.1 RefSeq gene 173226 173444 . - . ID=gene-AB11_RS06150;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AB11_RS06150;old_locus_tag=AB11_0924 NZ_JHDH01000102.1 Protein Homology CDS 173226 173444 . - 0 ID=cds-WP_001040187.1;Parent=gene-AB11_RS06150;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AB11_RS06150;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 173729 174433 . - . ID=gene-AB11_RS06155;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AB11_RS06155;old_locus_tag=AB11_0925 NZ_JHDH01000102.1 Protein Homology CDS 173729 174433 . - 0 ID=cds-WP_001241678.1;Parent=gene-AB11_RS06155;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AB11_RS06155;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 174475 176196 . - . ID=gene-AB11_RS06160;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AB11_RS06160;old_locus_tag=AB11_0926 NZ_JHDH01000102.1 Protein Homology CDS 174475 176196 . - 0 ID=cds-WP_001202175.1;Parent=gene-AB11_RS06160;Dbxref=GenBank:WP_001202175.1;Name=WP_001202175.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AB11_RS06160;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202175.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 176197 177963 . - . ID=gene-AB11_RS06165;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AB11_RS06165;old_locus_tag=AB11_0927 NZ_JHDH01000102.1 Protein Homology CDS 176197 177963 . - 0 ID=cds-WP_001043598.1;Parent=gene-AB11_RS06165;Dbxref=GenBank:WP_001043598.1;Name=WP_001043598.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415407.1;locus_tag=AB11_RS06165;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043598.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 178086 179051 . - . ID=gene-AB11_RS06170;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AB11_RS06170;old_locus_tag=AB11_0928 NZ_JHDH01000102.1 Protein Homology CDS 178086 179051 . - 0 ID=cds-WP_000537418.1;Parent=gene-AB11_RS06170;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AB11_RS06170;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 179596 180090 . + . ID=gene-AB11_RS06175;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AB11_RS06175;old_locus_tag=AB11_0930 NZ_JHDH01000102.1 Protein Homology CDS 179596 180090 . + 0 ID=cds-WP_000228473.1;Parent=gene-AB11_RS06175;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AB11_RS06175;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 180225 184097 . + . ID=gene-AB11_RS06180;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AB11_RS06180;old_locus_tag=AB11_0931 NZ_JHDH01000102.1 Protein Homology CDS 180225 184097 . + 0 ID=cds-WP_032223116.1;Parent=gene-AB11_RS06180;Dbxref=GenBank:WP_032223116.1;Name=WP_032223116.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AB11_RS06180;product=DNA translocase FtsK;protein_id=WP_032223116.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 184256 184867 . + . ID=gene-AB11_RS06185;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AB11_RS06185;old_locus_tag=AB11_0932 NZ_JHDH01000102.1 Protein Homology CDS 184256 184867 . + 0 ID=cds-WP_001295343.1;Parent=gene-AB11_RS06185;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AB11_RS06185;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 184878 186221 . + . ID=gene-AB11_RS06190;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AB11_RS06190;old_locus_tag=AB11_0933 NZ_JHDH01000102.1 Protein Homology CDS 184878 186221 . + 0 ID=cds-WP_000067755.1;Parent=gene-AB11_RS06190;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AB11_RS06190;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 186312 187604 . + . ID=gene-AB11_RS06195;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AB11_RS06195;old_locus_tag=AB11_0934 NZ_JHDH01000102.1 Protein Homology CDS 186312 187604 . + 0 ID=cds-WP_000886683.1;Parent=gene-AB11_RS06195;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AB11_RS06195;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 187843 190287 . + . ID=gene-AB11_RS06200;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AB11_RS06200;old_locus_tag=AB11_0935 NZ_JHDH01000102.1 Protein Homology CDS 187843 190287 . + 0 ID=cds-WP_000850303.1;Parent=gene-AB11_RS06200;Dbxref=GenBank:WP_000850303.1;Name=WP_000850303.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AB11_RS06200;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850303.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 190298 190915 . + . ID=gene-AB11_RS06205;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AB11_RS06205;old_locus_tag=AB11_0936 NZ_JHDH01000102.1 Protein Homology CDS 190298 190915 . + 0 ID=cds-WP_000213098.1;Parent=gene-AB11_RS06205;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB11_RS06205;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 190917 191780 . + . ID=gene-AB11_RS06210;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AB11_RS06210;old_locus_tag=AB11_0937 NZ_JHDH01000102.1 Protein Homology CDS 190917 191780 . + 0 ID=cds-WP_000534637.1;Parent=gene-AB11_RS06210;Dbxref=GenBank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AB11_RS06210;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534637.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 191815 192441 . - . ID=gene-AB11_RS06215;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AB11_RS06215;old_locus_tag=AB11_0938 NZ_JHDH01000102.1 Protein Homology CDS 191815 192441 . - 0 ID=cds-WP_000165879.1;Parent=gene-AB11_RS06215;Dbxref=GenBank:WP_000165879.1;Name=WP_000165879.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AB11_RS06215;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165879.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 192755 193903 . + . ID=gene-AB11_RS06220;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AB11_RS06220;old_locus_tag=AB11_0940 NZ_JHDH01000102.1 Protein Homology CDS 192755 193903 . + 0 ID=cds-WP_000109259.1;Parent=gene-AB11_RS06220;Dbxref=GenBank:WP_000109259.1;Name=WP_000109259.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415418.1;locus_tag=AB11_RS06220;product=MFS transporter;protein_id=WP_000109259.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 194113 195543 . + . ID=gene-AB11_RS06225;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AB11_RS06225;old_locus_tag=AB11_0941 NZ_JHDH01000102.1 Protein Homology CDS 194113 195543 . + 0 ID=cds-WP_000918506.1;Parent=gene-AB11_RS06225;Dbxref=GenBank:WP_000918506.1;Name=WP_000918506.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AB11_RS06225;product=APC family permease;protein_id=WP_000918506.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 195544 196452 . - . ID=gene-AB11_RS06230;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AB11_RS06230;old_locus_tag=AB11_0942 NZ_JHDH01000102.1 Protein Homology CDS 195544 196452 . - 0 ID=cds-WP_001454784.1;Parent=gene-AB11_RS06230;Dbxref=GenBank:WP_001454784.1;Name=WP_001454784.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AB11_RS06230;product=LysR family transcriptional regulator;protein_id=WP_001454784.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 196552 197142 . + . ID=gene-AB11_RS06235;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=AB11_RS06235;old_locus_tag=AB11_0943 NZ_JHDH01000102.1 Protein Homology CDS 196552 197142 . + 0 ID=cds-WP_001190363.1;Parent=gene-AB11_RS06235;Dbxref=GenBank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AB11_RS06235;product=NAD(P)H oxidoreductase;protein_id=WP_001190363.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 197224 197964 . - . ID=gene-AB11_RS06240;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AB11_RS06240;old_locus_tag=AB11_0944 NZ_JHDH01000102.1 Protein Homology CDS 197224 197964 . - 0 ID=cds-WP_000111043.1;Parent=gene-AB11_RS06240;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AB11_RS06240;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 198156 200438 . - . ID=gene-AB11_RS06245;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AB11_RS06245;old_locus_tag=AB11_0945 NZ_JHDH01000102.1 Protein Homology CDS 198156 200438 . - 0 ID=cds-WP_001292822.1;Parent=gene-AB11_RS06245;Dbxref=GenBank:WP_001292822.1;Name=WP_001292822.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=AB11_RS06245;product=formate C-acetyltransferase;protein_id=WP_001292822.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 200493 201350 . - . ID=gene-AB11_RS06250;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AB11_RS06250;old_locus_tag=AB11_0946 NZ_JHDH01000102.1 Protein Homology CDS 200493 201350 . - 0 ID=cds-WP_000642546.1;Parent=gene-AB11_RS06250;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AB11_RS06250;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 201756 203516 . - . ID=gene-AB11_RS06255;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AB11_RS06255;old_locus_tag=AB11_0947 NZ_JHDH01000102.1 Protein Homology CDS 201756 203516 . - 0 ID=cds-WP_032223118.1;Parent=gene-AB11_RS06255;Dbxref=GenBank:WP_032223118.1;Name=WP_032223118.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AB11_RS06255;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_032223118.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 203646 204338 . + . ID=gene-AB11_RS06260;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AB11_RS06260;old_locus_tag=AB11_0948 NZ_JHDH01000102.1 Protein Homology CDS 203646 204338 . + 0 ID=cds-WP_000642849.1;Parent=gene-AB11_RS06260;Dbxref=GenBank:WP_000642849.1;Name=WP_000642849.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AB11_RS06260;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 204537 205625 . + . ID=gene-AB11_RS06265;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AB11_RS06265;old_locus_tag=AB11_0949 NZ_JHDH01000102.1 Protein Homology CDS 204537 205625 . + 0 ID=cds-WP_000057138.1;Parent=gene-AB11_RS06265;Dbxref=GenBank:WP_000057138.1;Name=WP_000057138.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415427.1;locus_tag=AB11_RS06265;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057138.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 205696 206979 . + . ID=gene-AB11_RS06270;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AB11_RS06270;old_locus_tag=AB11_0950 NZ_JHDH01000102.1 Protein Homology CDS 205696 206979 . + 0 ID=cds-WP_000445231.1;Parent=gene-AB11_RS06270;Dbxref=GenBank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AB11_RS06270;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 207148 207912 . + . ID=gene-AB11_RS06275;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AB11_RS06275;old_locus_tag=AB11_0951 NZ_JHDH01000102.1 Protein Homology CDS 207148 207912 . + 0 ID=cds-WP_001295345.1;Parent=gene-AB11_RS06275;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AB11_RS06275;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 208085 208768 . + . ID=gene-AB11_RS06280;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AB11_RS06280;old_locus_tag=AB11_0952 NZ_JHDH01000102.1 Protein Homology CDS 208085 208768 . + 0 ID=cds-WP_000125016.1;Parent=gene-AB11_RS06280;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AB11_RS06280;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 208879 210552 . + . ID=gene-AB11_RS06285;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AB11_RS06285;old_locus_tag=AB11_0953 NZ_JHDH01000102.1 Protein Homology CDS 208879 210552 . + 0 ID=cds-WP_000140327.1;Parent=gene-AB11_RS06285;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AB11_RS06285;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 210712 210996 . + . ID=gene-AB11_RS06290;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AB11_RS06290;old_locus_tag=AB11_0954 NZ_JHDH01000102.1 Protein Homology CDS 210712 210996 . + 0 ID=cds-WP_000167336.1;Parent=gene-AB11_RS06290;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AB11_RS06290;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 211204 213468 . + . ID=gene-AB11_RS06295;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AB11_RS06295;old_locus_tag=AB11_0955 NZ_JHDH01000102.1 Protein Homology CDS 211204 213468 . + 0 ID=cds-WP_000705764.1;Parent=gene-AB11_RS06295;Dbxref=GenBank:WP_000705764.1;Name=WP_000705764.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AB11_RS06295;product=ComEC family protein;protein_id=WP_000705764.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 213505 215253 . + . ID=gene-AB11_RS06300;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AB11_RS06300;old_locus_tag=AB11_0956 NZ_JHDH01000102.1 Protein Homology CDS 213505 215253 . + 0 ID=cds-WP_000551270.1;Parent=gene-AB11_RS06300;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AB11_RS06300;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 215250 216236 . + . ID=gene-AB11_RS06305;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AB11_RS06305;old_locus_tag=AB11_0957 NZ_JHDH01000102.1 Protein Homology CDS 215250 216236 . + 0 ID=cds-WP_000570539.1;Parent=gene-AB11_RS06305;Dbxref=GenBank:WP_000570539.1;Name=WP_000570539.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415435.1;locus_tag=AB11_RS06305;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570539.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 216273 217505 . + . ID=gene-AB11_RS06310;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AB11_RS06310;old_locus_tag=AB11_0958 NZ_JHDH01000102.1 Protein Homology CDS 216273 217505 . + 0 ID=cds-WP_000056538.1;Parent=gene-AB11_RS06310;Dbxref=GenBank:WP_000056538.1;Name=WP_000056538.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AB11_RS06310;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056538.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 217557 217739 . + . ID=gene-AB11_RS06315;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AB11_RS06315;old_locus_tag=AB11_0959 NZ_JHDH01000102.1 Protein Homology CDS 217557 217739 . + 0 ID=cds-WP_000350058.1;Parent=gene-AB11_RS06315;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AB11_RS06315;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 217736 218482 . + . ID=gene-AB11_RS06320;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AB11_RS06320;old_locus_tag=AB11_0960 NZ_JHDH01000102.1 Protein Homology CDS 217736 218482 . + 0 ID=cds-WP_000011603.1;Parent=gene-AB11_RS06320;Dbxref=GenBank:WP_000011603.1;Name=WP_000011603.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=AB11_RS06320;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011603.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 218636 219529 . + . ID=gene-AB11_RS06325;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AB11_RS06325;old_locus_tag=AB11_0961 NZ_JHDH01000102.1 Protein Homology CDS 218636 219529 . + 0 ID=cds-WP_000436922.1;Parent=gene-AB11_RS06325;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AB11_RS06325;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 219506 220285 . - . ID=gene-AB11_RS06330;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AB11_RS06330;old_locus_tag=AB11_0962 NZ_JHDH01000102.1 Protein Homology CDS 219506 220285 . - 0 ID=cds-WP_000899600.1;Parent=gene-AB11_RS06330;Dbxref=GenBank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=AB11_RS06330;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 220421 221206 . + . ID=gene-AB11_RS06335;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AB11_RS06335;old_locus_tag=AB11_0963 NZ_JHDH01000102.1 Protein Homology CDS 220421 221206 . + 0 ID=cds-WP_001298300.1;Parent=gene-AB11_RS06335;Dbxref=GenBank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AB11_RS06335;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 221203 222525 . + . ID=gene-AB11_RS06340;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AB11_RS06340;old_locus_tag=AB11_0964 NZ_JHDH01000102.1 Protein Homology CDS 221203 222525 . + 0 ID=cds-WP_001288850.1;Parent=gene-AB11_RS06340;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AB11_RS06340;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 222506 223210 . + . ID=gene-AB11_RS06345;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AB11_RS06345;old_locus_tag=AB11_0965 NZ_JHDH01000102.1 Protein Homology CDS 222506 223210 . + 0 ID=cds-WP_001295347.1;Parent=gene-AB11_RS06345;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AB11_RS06345;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 223210 227670 . + . ID=gene-AB11_RS06350;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AB11_RS06350;old_locus_tag=AB11_0966 NZ_JHDH01000102.1 Protein Homology CDS 223210 227670 . + 0 ID=cds-WP_032223121.1;Parent=gene-AB11_RS06350;Dbxref=GenBank:WP_032223121.1;Name=WP_032223121.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415444.1;locus_tag=AB11_RS06350;product=chromosome partition protein MukB;protein_id=WP_032223121.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 227931 229778 . + . ID=gene-AB11_RS06355;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AB11_RS06355;old_locus_tag=AB11_0967 NZ_JHDH01000102.1 Protein Homology CDS 227931 229778 . + 0 ID=cds-WP_000925985.1;Parent=gene-AB11_RS06355;Dbxref=GenBank:WP_000925985.1;Name=WP_000925985.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AB11_RS06355;product=L%2CD-transpeptidase;protein_id=WP_000925985.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 229959 230507 . + . ID=gene-AB11_RS06360;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AB11_RS06360;old_locus_tag=AB11_0968 NZ_JHDH01000102.1 Protein Homology CDS 229959 230507 . + 0 ID=cds-WP_001295932.1;Parent=gene-AB11_RS06360;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AB11_RS06360;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 230534 231181 . + . ID=gene-AB11_RS06365;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AB11_RS06365;old_locus_tag=AB11_0969 NZ_JHDH01000102.1 Protein Homology CDS 230534 231181 . + 0 ID=cds-WP_001416027.1;Parent=gene-AB11_RS06365;Dbxref=GenBank:WP_001416027.1;Name=WP_001416027.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AB11_RS06365;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001416027.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 231403 232593 . - . ID=gene-AB11_RS06370;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AB11_RS06370;old_locus_tag=AB11_0970 NZ_JHDH01000102.1 Protein Homology CDS 231403 232593 . - 0 ID=cds-WP_000462687.1;Parent=gene-AB11_RS06370;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AB11_RS06370;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 232778 233866 . - . ID=gene-AB11_RS06375;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AB11_RS06375;old_locus_tag=AB11_0971 NZ_JHDH01000102.1 Protein Homology CDS 232778 233866 . - 0 ID=cds-WP_000977920.1;Parent=gene-AB11_RS06375;Dbxref=GenBank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AB11_RS06375;product=porin OmpF;protein_id=WP_000977920.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 234469 235869 . - . ID=gene-AB11_RS06380;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AB11_RS06380;old_locus_tag=AB11_0973 NZ_JHDH01000102.1 Protein Homology CDS 234469 235869 . - 0 ID=cds-WP_000117881.1;Parent=gene-AB11_RS06380;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AB11_RS06380;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 236038 237240 . - . ID=gene-AB11_RS06385;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AB11_RS06385;old_locus_tag=AB11_0974 NZ_JHDH01000102.1 Protein Homology CDS 236038 237240 . - 0 ID=cds-WP_001307697.1;Parent=gene-AB11_RS06385;Dbxref=GenBank:WP_001307697.1;Name=WP_001307697.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AB11_RS06385;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 237506 240118 . + . ID=gene-AB11_RS06390;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AB11_RS06390;old_locus_tag=AB11_0976 NZ_JHDH01000102.1 Protein Homology CDS 237506 240118 . + 0 ID=cds-WP_000193841.1;Parent=gene-AB11_RS06390;Dbxref=GenBank:WP_000193841.1;Name=WP_000193841.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AB11_RS06390;product=aminopeptidase N;protein_id=WP_000193841.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 240161 240928 . - . ID=gene-AB11_RS06395;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AB11_RS06395;old_locus_tag=AB11_0977 NZ_JHDH01000102.1 Protein Homology CDS 240161 240928 . - 0 ID=cds-WP_001090506.1;Parent=gene-AB11_RS06395;Dbxref=GenBank:WP_001090506.1;Name=WP_001090506.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AB11_RS06395;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 240925 241716 . - . ID=gene-AB11_RS06400;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AB11_RS06400;old_locus_tag=AB11_0978 NZ_JHDH01000102.1 Protein Homology CDS 240925 241716 . - 0 ID=cds-WP_000235203.1;Parent=gene-AB11_RS06400;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AB11_RS06400;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 241727 242872 . - . ID=gene-AB11_RS06405;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AB11_RS06405;old_locus_tag=AB11_0979 NZ_JHDH01000102.1 Protein Homology CDS 241727 242872 . - 0 ID=cds-WP_000056006.1;Parent=gene-AB11_RS06405;Dbxref=GenBank:WP_000056006.1;Name=WP_000056006.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AB11_RS06405;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000056006.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 242869 243828 . - . ID=gene-AB11_RS06410;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AB11_RS06410;old_locus_tag=AB11_0980 NZ_JHDH01000102.1 Protein Homology CDS 242869 243828 . - 0 ID=cds-WP_001244308.1;Parent=gene-AB11_RS06410;Dbxref=GenBank:WP_001244308.1;Name=WP_001244308.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AB11_RS06410;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244308.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 243821 244396 . - . ID=gene-AB11_RS06415;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AB11_RS06415;old_locus_tag=AB11_0981 NZ_JHDH01000102.1 Protein Homology CDS 243821 244396 . - 0 ID=cds-WP_001263933.1;Parent=gene-AB11_RS06415;Dbxref=GenBank:WP_001263933.1;Name=WP_001263933.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AB11_RS06415;product=NADPH-dependent FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 244752 245291 . + . ID=gene-AB11_RS06420;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AB11_RS06420;old_locus_tag=AB11_0982 NZ_JHDH01000102.1 Protein Homology CDS 244752 245291 . + 0 ID=cds-WP_000750293.1;Parent=gene-AB11_RS06420;Dbxref=GenBank:WP_000750293.1;Name=WP_000750293.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AB11_RS06420;product=fimbrial protein;protein_id=WP_000750293.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 245374 246075 . + . ID=gene-AB11_RS06425;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AB11_RS06425;old_locus_tag=AB11_0983 NZ_JHDH01000102.1 Protein Homology CDS 245374 246075 . + 0 ID=cds-WP_001295349.1;Parent=gene-AB11_RS06425;Dbxref=GenBank:WP_001295349.1;Name=WP_001295349.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AB11_RS06425;product=fimbrial biogenesis chaperone;protein_id=WP_001295349.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 246100 248700 . + . ID=gene-AB11_RS06430;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AB11_RS06430;old_locus_tag=AB11_0984 NZ_JHDH01000102.1 Protein Homology CDS 246100 248700 . + 0 ID=cds-WP_000286312.1;Parent=gene-AB11_RS06430;Dbxref=GenBank:WP_000286312.1;Name=WP_000286312.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AB11_RS06430;product=fimbrial biogenesis usher protein;protein_id=WP_000286312.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 248691 249761 . + . ID=gene-AB11_RS06435;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AB11_RS06435;old_locus_tag=AB11_0985 NZ_JHDH01000102.1 Protein Homology CDS 248691 249761 . + 0 ID=cds-WP_032223123.1;Parent=gene-AB11_RS06435;Dbxref=GenBank:WP_032223123.1;Name=WP_032223123.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AB11_RS06435;product=fimbrial protein;protein_id=WP_032223123.1;transl_table=11 NZ_JHDH01000102.1 RefSeq pseudogene 249773 250255 . + . ID=gene-AB11_RS25505;Name=AB11_RS25505;end_range=250255,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25505;partial=true;pseudo=true NZ_JHDH01000102.1 Protein Homology CDS 249773 250255 . + 0 ID=cds-AB11_RS25505;Parent=gene-AB11_RS25505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007155,GO:0009289;end_range=250255,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AB11_RS25505;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JHDH01000102.1 RefSeq pseudogene 250316 250561 . + . ID=gene-AB11_RS26040;Name=AB11_RS26040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26040;partial=true;pseudo=true;start_range=.,250316 NZ_JHDH01000102.1 Protein Homology CDS 250316 250561 . + 0 ID=cds-AB11_RS26040;Parent=gene-AB11_RS26040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AB11_RS26040;partial=true;product=fimbrial protein;pseudo=true;start_range=.,250316;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 250569 251084 . + . ID=gene-AB11_RS06450;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AB11_RS06450;old_locus_tag=AB11_0987 NZ_JHDH01000102.1 Protein Homology CDS 250569 251084 . + 0 ID=cds-WP_000919497.1-2;Parent=gene-AB11_RS06450;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AB11_RS06450;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 251050 251787 . + . ID=gene-AB11_RS06455;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AB11_RS06455;old_locus_tag=AB11_0988 NZ_JHDH01000102.1 Protein Homology CDS 251050 251787 . + 0 ID=cds-WP_001111465.1;Parent=gene-AB11_RS06455;Dbxref=GenBank:WP_001111465.1;Name=WP_001111465.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AB11_RS06455;product=fimbrial chaperone;protein_id=WP_001111465.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 251898 252908 . + . ID=gene-AB11_RS06460;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AB11_RS06460;old_locus_tag=AB11_0989 NZ_JHDH01000102.1 Protein Homology CDS 251898 252908 . + 0 ID=cds-WP_001295352.1;Parent=gene-AB11_RS06460;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AB11_RS06460;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 253082 253624 . + . ID=gene-AB11_RS06465;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AB11_RS06465;old_locus_tag=AB11_0990 NZ_JHDH01000102.1 Protein Homology CDS 253082 253624 . + 0 ID=cds-WP_001295353.1;Parent=gene-AB11_RS06465;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AB11_RS06465;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 253621 254730 . - . ID=gene-AB11_RS06470;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AB11_RS06470;old_locus_tag=AB11_0991 NZ_JHDH01000102.1 Protein Homology CDS 253621 254730 . - 0 ID=cds-WP_000212426.1;Parent=gene-AB11_RS06470;Dbxref=GenBank:WP_000212426.1;Name=WP_000212426.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AB11_RS06470;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_000212426.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 254974 257082 . + . ID=gene-AB11_RS06475;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AB11_RS06475;old_locus_tag=AB11_0992 NZ_JHDH01000102.1 Protein Homology CDS 254974 257082 . + 0 ID=cds-WP_021570745.1;Parent=gene-AB11_RS06475;Dbxref=GenBank:WP_021570745.1;Name=WP_021570745.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415468.1;locus_tag=AB11_RS06475;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_021570745.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 257094 259001 . + . ID=gene-AB11_RS06480;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AB11_RS06480;old_locus_tag=AB11_0993 NZ_JHDH01000102.1 Protein Homology CDS 257094 259001 . + 0 ID=cds-WP_000053099.1;Parent=gene-AB11_RS06480;Dbxref=GenBank:WP_000053099.1;Name=WP_000053099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AB11_RS06480;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 259131 260384 . + . ID=gene-AB11_RS06485;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AB11_RS06485;old_locus_tag=AB11_0994 NZ_JHDH01000102.1 Protein Homology CDS 259131 260384 . + 0 ID=cds-WP_001372779.1;Parent=gene-AB11_RS06485;Dbxref=GenBank:WP_001372779.1;Name=WP_001372779.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AB11_RS06485;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_001372779.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 260389 262029 . + . ID=gene-AB11_RS06490;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AB11_RS06490;old_locus_tag=AB11_0995 NZ_JHDH01000102.1 Protein Homology CDS 260389 262029 . + 0 ID=cds-WP_000445533.1;Parent=gene-AB11_RS06490;Dbxref=GenBank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AB11_RS06490;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 262026 262589 . + . ID=gene-AB11_RS06495;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AB11_RS06495;old_locus_tag=AB11_0996 NZ_JHDH01000102.1 Protein Homology CDS 262026 262589 . + 0 ID=cds-WP_000759120.1;Parent=gene-AB11_RS06495;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AB11_RS06495;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 262845 263012 . + . ID=gene-AB11_RS06500;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AB11_RS06500 NZ_JHDH01000102.1 Protein Homology CDS 262845 263012 . + 0 ID=cds-WP_000828648.1;Parent=gene-AB11_RS06500;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AB11_RS06500;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 263082 263600 . - . ID=gene-AB11_RS06505;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AB11_RS06505;old_locus_tag=AB11_0997 NZ_JHDH01000102.1 Protein Homology CDS 263082 263600 . - 0 ID=cds-WP_000227927.1;Parent=gene-AB11_RS06505;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AB11_RS06505;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 263669 265429 . - . ID=gene-AB11_RS06510;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AB11_RS06510;old_locus_tag=AB11_0998 NZ_JHDH01000102.1 Protein Homology CDS 263669 265429 . - 0 ID=cds-WP_000156518.1;Parent=gene-AB11_RS06510;Dbxref=GenBank:WP_000156518.1;Name=WP_000156518.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AB11_RS06510;product=AAA family ATPase;protein_id=WP_000156518.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 265615 266067 . + . ID=gene-AB11_RS06515;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AB11_RS06515;old_locus_tag=AB11_0999 NZ_JHDH01000102.1 Protein Homology CDS 265615 266067 . + 0 ID=cds-WP_000877161.1;Parent=gene-AB11_RS06515;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AB11_RS06515;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 266143 267183 . - . ID=gene-AB11_RS06520;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AB11_RS06520;old_locus_tag=AB11_1000 NZ_JHDH01000102.1 Protein Homology CDS 266143 267183 . - 0 ID=cds-WP_000750416.1;Parent=gene-AB11_RS06520;Dbxref=GenBank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AB11_RS06520;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 267540 268049 . - . ID=gene-AB11_RS06525;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AB11_RS06525;old_locus_tag=AB11_1001 NZ_JHDH01000102.1 Protein Homology CDS 267540 268049 . - 0 ID=cds-WP_000288710.1;Parent=gene-AB11_RS06525;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AB11_RS06525;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 268268 268897 . + . ID=gene-AB11_RS06530;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AB11_RS06530;old_locus_tag=AB11_1002 NZ_JHDH01000102.1 Protein Homology CDS 268268 268897 . + 0 ID=cds-WP_000839153.1;Parent=gene-AB11_RS06530;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AB11_RS06530;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 268860 271022 . - . ID=gene-AB11_RS06535;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AB11_RS06535;old_locus_tag=AB11_1003 NZ_JHDH01000102.1 Protein Homology CDS 268860 271022 . - 0 ID=cds-WP_000875061.1;Parent=gene-AB11_RS06535;Dbxref=GenBank:WP_000875061.1;Name=WP_000875061.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AB11_RS06535;product=YccS family putative transporter;protein_id=WP_000875061.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 271032 271478 . - . ID=gene-AB11_RS06540;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AB11_RS06540;old_locus_tag=AB11_1004 NZ_JHDH01000102.1 Protein Homology CDS 271032 271478 . - 0 ID=cds-WP_001261235.1;Parent=gene-AB11_RS06540;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AB11_RS06540;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 271601 273655 . + . ID=gene-AB11_RS06545;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AB11_RS06545;old_locus_tag=AB11_1005 NZ_JHDH01000102.1 Protein Homology CDS 271601 273655 . + 0 ID=cds-WP_001295354.1;Parent=gene-AB11_RS06545;Dbxref=GenBank:WP_001295354.1;Name=WP_001295354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AB11_RS06545;product=DNA helicase IV;protein_id=WP_001295354.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 273687 274145 . - . ID=gene-AB11_RS06550;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AB11_RS06550;old_locus_tag=AB11_1006 NZ_JHDH01000102.1 Protein Homology CDS 273687 274145 . - 0 ID=cds-WP_000424181.1;Parent=gene-AB11_RS06550;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AB11_RS06550;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 274241 274903 . - . ID=gene-AB11_RS06555;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AB11_RS06555;old_locus_tag=AB11_1007 NZ_JHDH01000102.1 Protein Homology CDS 274241 274903 . - 0 ID=cds-WP_000847791.1;Parent=gene-AB11_RS06555;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AB11_RS06555;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 275076 275489 . + . ID=gene-AB11_RS06560;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AB11_RS06560;old_locus_tag=AB11_1009 NZ_JHDH01000102.1 Protein Homology CDS 275076 275489 . + 0 ID=cds-WP_001301418.1;Parent=gene-AB11_RS06560;Dbxref=GenBank:WP_001301418.1;Name=WP_001301418.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415485.4;locus_tag=AB11_RS06560;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 275534 275851 . - . ID=gene-AB11_RS06565;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AB11_RS06565;old_locus_tag=AB11_1010 NZ_JHDH01000102.1 Protein Homology CDS 275534 275851 . - 0 ID=cds-WP_001295356.1;Parent=gene-AB11_RS06565;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AB11_RS06565;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 275909 277099 . - . ID=gene-AB11_RS06570;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AB11_RS06570;old_locus_tag=AB11_1011 NZ_JHDH01000102.1 Protein Homology CDS 275909 277099 . - 0 ID=cds-WP_000116297.1;Parent=gene-AB11_RS06570;Dbxref=GenBank:WP_000116297.1;Name=WP_000116297.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AB11_RS06570;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116297.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 277194 277472 . + . ID=gene-AB11_RS06575;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AB11_RS06575;old_locus_tag=AB11_1012 NZ_JHDH01000102.1 Protein Homology CDS 277194 277472 . + 0 ID=cds-WP_000048252.1;Parent=gene-AB11_RS06575;Dbxref=GenBank:WP_000048252.1;Name=WP_000048252.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AB11_RS06575;product=acylphosphatase;protein_id=WP_000048252.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 277469 277798 . - . ID=gene-AB11_RS06580;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AB11_RS06580;old_locus_tag=AB11_1013 NZ_JHDH01000102.1 Protein Homology CDS 277469 277798 . - 0 ID=cds-WP_000904442.1;Parent=gene-AB11_RS06580;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AB11_RS06580;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 277889 278548 . - . ID=gene-AB11_RS06585;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AB11_RS06585;old_locus_tag=AB11_1014 NZ_JHDH01000102.1 Protein Homology CDS 277889 278548 . - 0 ID=cds-WP_000375136.1;Parent=gene-AB11_RS06585;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AB11_RS06585;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 278755 278842 . - . ID=gene-AB11_RS06590;Name=AB11_RS06590;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS06590;old_locus_tag=AB11_1015 NZ_JHDH01000102.1 tRNAscan-SE tRNA 278755 278842 . - . ID=rna-AB11_RS06590;Parent=gene-AB11_RS06590;anticodon=(pos:complement(278806..278808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06590;product=tRNA-Ser NZ_JHDH01000102.1 tRNAscan-SE exon 278755 278842 . - . ID=exon-AB11_RS06590-1;Parent=rna-AB11_RS06590;anticodon=(pos:complement(278806..278808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06590;product=tRNA-Ser NZ_JHDH01000102.1 RefSeq gene 279269 280387 . + . ID=gene-AB11_RS06595;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AB11_RS06595;old_locus_tag=AB11_1016 NZ_JHDH01000102.1 Protein Homology CDS 279269 280387 . + 0 ID=cds-WP_001058323.1;Parent=gene-AB11_RS06595;Dbxref=GenBank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AB11_RS06595;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 280384 282177 . + . ID=gene-AB11_RS06600;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AB11_RS06600;old_locus_tag=AB11_1017 NZ_JHDH01000102.1 Protein Homology CDS 280384 282177 . + 0 ID=cds-WP_000107384.1;Parent=gene-AB11_RS06600;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AB11_RS06600;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 282196 282903 . + . ID=gene-AB11_RS06605;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AB11_RS06605;old_locus_tag=AB11_1018 NZ_JHDH01000102.1 Protein Homology CDS 282196 282903 . + 0 ID=cds-WP_001186424.1;Parent=gene-AB11_RS06605;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AB11_RS06605;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 282900 283487 . + . ID=gene-AB11_RS06610;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AB11_RS06610;old_locus_tag=AB11_1019 NZ_JHDH01000102.1 Protein Homology CDS 282900 283487 . + 0 ID=cds-WP_000003671.1;Parent=gene-AB11_RS06610;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AB11_RS06610;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 283484 283882 . + . ID=gene-AB11_RS06615;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AB11_RS06615;old_locus_tag=AB11_1020 NZ_JHDH01000102.1 Protein Homology CDS 283484 283882 . + 0 ID=cds-WP_000063978.1;Parent=gene-AB11_RS06615;Dbxref=GenBank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AB11_RS06615;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 283879 284736 . + . ID=gene-AB11_RS06620;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AB11_RS06620;old_locus_tag=AB11_1021 NZ_JHDH01000102.1 Protein Homology CDS 283879 284736 . + 0 ID=cds-WP_000004899.1;Parent=gene-AB11_RS06620;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AB11_RS06620;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 284870 286414 . + . ID=gene-AB11_RS06625;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AB11_RS06625;old_locus_tag=AB11_1022 NZ_JHDH01000102.1 Protein Homology CDS 284870 286414 . + 0 ID=cds-WP_001645148.1;Parent=gene-AB11_RS06625;Dbxref=GenBank:WP_001645148.1;Name=WP_001645148.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AB11_RS06625;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_001645148.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 286426 287562 . + . ID=gene-AB11_RS06630;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AB11_RS06630;old_locus_tag=AB11_1023 NZ_JHDH01000102.1 Protein Homology CDS 286426 287562 . + 0 ID=cds-WP_000460803.1;Parent=gene-AB11_RS06630;Dbxref=GenBank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AB11_RS06630;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460803.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 287575 287667 . + . ID=gene-AB11_RS06635;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AB11_RS06635 NZ_JHDH01000102.1 Protein Homology CDS 287575 287667 . + 0 ID=cds-WP_000270305.1;Parent=gene-AB11_RS06635;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AB11_RS06635;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 287747 289045 . + . ID=gene-AB11_RS06640;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AB11_RS06640;old_locus_tag=AB11_1024 NZ_JHDH01000102.1 Protein Homology CDS 287747 289045 . + 0 ID=cds-WP_001300464.1;Parent=gene-AB11_RS06640;Dbxref=GenBank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AB11_RS06640;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 289160 291340 . - . ID=gene-AB11_RS06645;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AB11_RS06645;old_locus_tag=AB11_1025 NZ_JHDH01000102.1 Protein Homology CDS 289160 291340 . - 0 ID=cds-WP_000208650.1;Parent=gene-AB11_RS06645;Dbxref=GenBank:WP_000208650.1;Name=WP_000208650.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=AB11_RS06645;product=tyrosine-protein kinase;protein_id=WP_000208650.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 291360 291806 . - . ID=gene-AB11_RS06650;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AB11_RS06650;old_locus_tag=AB11_1026 NZ_JHDH01000102.1 Protein Homology CDS 291360 291806 . - 0 ID=cds-WP_000057871.1;Parent=gene-AB11_RS06650;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AB11_RS06650;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 291794 292933 . - . ID=gene-AB11_RS06655;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AB11_RS06655;old_locus_tag=AB11_1027 NZ_JHDH01000102.1 Protein Homology CDS 291794 292933 . - 0 ID=cds-WP_001295357.1;Parent=gene-AB11_RS06655;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AB11_RS06655;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 292979 295075 . - . ID=gene-AB11_RS06660;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AB11_RS06660;old_locus_tag=AB11_1028 NZ_JHDH01000102.1 Protein Homology CDS 292979 295075 . - 0 ID=cds-WP_000742328.1;Parent=gene-AB11_RS06660;Dbxref=GenBank:WP_000742328.1;Name=WP_000742328.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415504.1;locus_tag=AB11_RS06660;product=YjbH domain-containing protein;protein_id=WP_000742328.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 295075 295821 . - . ID=gene-AB11_RS06665;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AB11_RS06665;old_locus_tag=AB11_1029 NZ_JHDH01000102.1 Protein Homology CDS 295075 295821 . - 0 ID=cds-WP_001038079.1;Parent=gene-AB11_RS06665;Dbxref=GenBank:WP_001038079.1;Name=WP_001038079.1;Ontology_term=GO:0042603;gbkey=CDS;gene=gfcC;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AB11_RS06665;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 295818 296462 . - . ID=gene-AB11_RS06670;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AB11_RS06670;old_locus_tag=AB11_1030 NZ_JHDH01000102.1 Protein Homology CDS 295818 296462 . - 0 ID=cds-WP_001247610.1;Parent=gene-AB11_RS06670;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AB11_RS06670;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 296569 296874 . - . ID=gene-AB11_RS06675;Name=gfcA;gbkey=Gene;gene=gfcA;gene_biotype=protein_coding;locus_tag=AB11_RS06675;old_locus_tag=AB11_1031 NZ_JHDH01000102.1 Protein Homology CDS 296569 296874 . - 0 ID=cds-WP_001295358.1;Parent=gene-AB11_RS06675;Dbxref=GenBank:WP_001295358.1;Name=WP_001295358.1;gbkey=CDS;gene=gfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415507.2;locus_tag=AB11_RS06675;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001295358.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 297316 297528 . - . ID=gene-AB11_RS06680;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AB11_RS06680;old_locus_tag=AB11_1032 NZ_JHDH01000102.1 Protein Homology CDS 297316 297528 . - 0 ID=cds-WP_000087763.1;Parent=gene-AB11_RS06680;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AB11_RS06680;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 297814 298026 . + . ID=gene-AB11_RS06685;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AB11_RS06685;old_locus_tag=AB11_1033 NZ_JHDH01000102.1 Protein Homology CDS 297814 298026 . + 0 ID=cds-WP_000066490.1;Parent=gene-AB11_RS06685;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AB11_RS06685;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 298037 298225 . + . ID=gene-AB11_RS06690;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AB11_RS06690 NZ_JHDH01000102.1 Protein Homology CDS 298037 298225 . + 0 ID=cds-WP_071524879.1;Parent=gene-AB11_RS06690;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AB11_RS06690;product=cold shock small protein YmcF;protein_id=WP_071524879.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 298200 298430 . + . ID=gene-AB11_RS06695;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AB11_RS06695 NZ_JHDH01000102.1 Protein Homology CDS 298200 298430 . + 0 ID=cds-WP_001309400.1;Parent=gene-AB11_RS06695;Dbxref=GenBank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AB11_RS06695;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 298420 298593 . + . ID=gene-AB11_RS06700;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AB11_RS06700;old_locus_tag=AB11_1035 NZ_JHDH01000102.1 Protein Homology CDS 298420 298593 . + 0 ID=cds-WP_001019197.1;Parent=gene-AB11_RS06700;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AB11_RS06700;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 298642 299715 . - . ID=gene-AB11_RS06705;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AB11_RS06705;old_locus_tag=AB11_1036 NZ_JHDH01000102.1 Protein Homology CDS 298642 299715 . - 0 ID=cds-WP_000829662.1;Parent=gene-AB11_RS06705;Dbxref=GenBank:WP_000829662.1;Name=WP_000829662.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AB11_RS06705;product=4Fe-4S binding protein;protein_id=WP_000829662.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 299787 302531 . - . ID=gene-AB11_RS06710;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AB11_RS06710;old_locus_tag=AB11_1037 NZ_JHDH01000102.1 Protein Homology CDS 299787 302531 . - 0 ID=cds-WP_001300633.1;Parent=gene-AB11_RS06710;Dbxref=GenBank:WP_001300633.1;Name=WP_001300633.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AB11_RS06710;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_001300633.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 302614 303642 . + . ID=gene-AB11_RS06715;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AB11_RS06715;old_locus_tag=AB11_1038 NZ_JHDH01000102.1 Protein Homology CDS 302614 303642 . + 0 ID=cds-WP_001264933.1;Parent=gene-AB11_RS06715;Dbxref=GenBank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AB11_RS06715;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 303615 304307 . - . ID=gene-AB11_RS06720;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AB11_RS06720;old_locus_tag=AB11_1039 NZ_JHDH01000102.1 Protein Homology CDS 303615 304307 . - 0 ID=cds-WP_001120125.1;Parent=gene-AB11_RS06720;Dbxref=GenBank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415515.1;locus_tag=AB11_RS06720;product=two-component system response regulator TorR;protein_id=WP_001120125.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 304437 305609 . + . ID=gene-AB11_RS06725;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AB11_RS06725;old_locus_tag=AB11_1040 NZ_JHDH01000102.1 Protein Homology CDS 304437 305609 . + 0 ID=cds-WP_001230242.1;Parent=gene-AB11_RS06725;Dbxref=GenBank:WP_001230242.1;Name=WP_001230242.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AB11_RS06725;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230242.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 305609 308155 . + . ID=gene-AB11_RS06730;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AB11_RS06730;old_locus_tag=AB11_1041 NZ_JHDH01000102.1 Protein Homology CDS 305609 308155 . + 0 ID=cds-WP_001643273.1;Parent=gene-AB11_RS06730;Dbxref=GenBank:WP_001643273.1;Name=WP_001643273.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AB11_RS06730;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001643273.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 308152 308751 . + . ID=gene-AB11_RS06735;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AB11_RS06735;old_locus_tag=AB11_1042 NZ_JHDH01000102.1 Protein Homology CDS 308152 308751 . + 0 ID=cds-WP_000209868.1;Parent=gene-AB11_RS06735;Dbxref=GenBank:WP_000209868.1;Name=WP_000209868.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AB11_RS06735;product=molecular chaperone TorD;protein_id=WP_000209868.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 308903 309208 . - . ID=gene-AB11_RS06740;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AB11_RS06740;old_locus_tag=AB11_1043 NZ_JHDH01000102.1 Protein Homology CDS 308903 309208 . - 0 ID=cds-WP_000024560.1;Parent=gene-AB11_RS06740;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AB11_RS06740;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 309208 310128 . - . ID=gene-AB11_RS06745;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AB11_RS06745;old_locus_tag=AB11_1044 NZ_JHDH01000102.1 Protein Homology CDS 309208 310128 . - 0 ID=cds-WP_000420621.1;Parent=gene-AB11_RS06745;Dbxref=GenBank:WP_000420621.1;Name=WP_000420621.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AB11_RS06745;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 310389 311645 . + . ID=gene-AB11_RS06750;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=protein_coding;locus_tag=AB11_RS06750;old_locus_tag=AB11_1045 NZ_JHDH01000102.1 Protein Homology CDS 310389 311645 . + 0 ID=cds-WP_021570752.1;Parent=gene-AB11_RS06750;Dbxref=GenBank:WP_021570752.1;Name=WP_021570752.1;gbkey=CDS;gene=yccE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AB11_RS06750;product=YccE family protein;protein_id=WP_021570752.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 311938 313179 . + . ID=gene-AB11_RS06755;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AB11_RS06755;old_locus_tag=AB11_1046 NZ_JHDH01000102.1 Protein Homology CDS 311938 313179 . + 0 ID=cds-WP_001044280.1;Parent=gene-AB11_RS06755;Dbxref=GenBank:WP_001044280.1;Name=WP_001044280.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AB11_RS06755;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044280.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 313217 313444 . - . ID=gene-AB11_RS06760;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AB11_RS06760;old_locus_tag=AB11_1047 NZ_JHDH01000102.1 Protein Homology CDS 313217 313444 . - 0 ID=cds-WP_001143120.1;Parent=gene-AB11_RS06760;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AB11_RS06760;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 313465 314061 . - . ID=gene-AB11_RS06765;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AB11_RS06765;old_locus_tag=AB11_1048 NZ_JHDH01000102.1 Protein Homology CDS 313465 314061 . - 0 ID=cds-WP_001151437.1;Parent=gene-AB11_RS06765;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AB11_RS06765;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 314434 314607 . + . ID=gene-AB11_RS06770;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AB11_RS06770 NZ_JHDH01000102.1 Protein Homology CDS 314434 314607 . + 0 ID=cds-WP_001273658.1;Parent=gene-AB11_RS06770;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AB11_RS06770;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 314865 316193 . - . ID=gene-AB11_RS06775;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AB11_RS06775;old_locus_tag=AB11_1049 NZ_JHDH01000102.1 Protein Homology CDS 314865 316193 . - 0 ID=cds-WP_001338446.1;Parent=gene-AB11_RS06775;Dbxref=GenBank:WP_001338446.1;Name=WP_001338446.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AB11_RS06775;product=pyrimidine utilization transport protein G;protein_id=WP_001338446.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 316214 316708 . - . ID=gene-AB11_RS06780;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AB11_RS06780;old_locus_tag=AB11_1050 NZ_JHDH01000102.1 Protein Homology CDS 316214 316708 . - 0 ID=cds-WP_001028083.1;Parent=gene-AB11_RS06780;Dbxref=GenBank:WP_001028083.1;Name=WP_001028083.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415527.4;locus_tag=AB11_RS06780;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028083.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 316719 317309 . - . ID=gene-AB11_RS06785;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AB11_RS06785;old_locus_tag=AB11_1051 NZ_JHDH01000102.1 Protein Homology CDS 316719 317309 . - 0 ID=cds-WP_001001176.1;Parent=gene-AB11_RS06785;Dbxref=GenBank:WP_001001176.1;Name=WP_001001176.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415528.1;locus_tag=AB11_RS06785;product=malonic semialdehyde reductase;protein_id=WP_001001176.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 317319 318119 . - . ID=gene-AB11_RS06790;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AB11_RS06790;old_locus_tag=AB11_1052 NZ_JHDH01000102.1 Protein Homology CDS 317319 318119 . - 0 ID=cds-WP_000777653.1;Parent=gene-AB11_RS06790;Dbxref=GenBank:WP_000777653.1;Name=WP_000777653.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415529.1;locus_tag=AB11_RS06790;product=pyrimidine utilization protein D;protein_id=WP_000777653.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 318127 318513 . - . ID=gene-AB11_RS06795;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AB11_RS06795;old_locus_tag=AB11_1053 NZ_JHDH01000102.1 Protein Homology CDS 318127 318513 . - 0 ID=cds-WP_001126780.1;Parent=gene-AB11_RS06795;Dbxref=GenBank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AB11_RS06795;product=3-aminoacrylate deaminase;protein_id=WP_001126780.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 318525 319217 . - . ID=gene-AB11_RS06800;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AB11_RS06800;old_locus_tag=AB11_1054 NZ_JHDH01000102.1 Protein Homology CDS 318525 319217 . - 0 ID=cds-WP_001393558.1;Parent=gene-AB11_RS06800;Dbxref=GenBank:WP_001393558.1;Name=WP_001393558.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AB11_RS06800;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001393558.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 319217 320308 . - . ID=gene-AB11_RS06805;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AB11_RS06805;old_locus_tag=AB11_1055 NZ_JHDH01000102.1 Protein Homology CDS 319217 320308 . - 0 ID=cds-WP_001340618.1;Parent=gene-AB11_RS06805;Dbxref=GenBank:WP_001340618.1;Name=WP_001340618.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AB11_RS06805;product=pyrimidine utilization protein A;protein_id=WP_001340618.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 320596 321234 . + . ID=gene-AB11_RS06810;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AB11_RS06810;old_locus_tag=AB11_1056 NZ_JHDH01000102.1 Protein Homology CDS 320596 321234 . + 0 ID=cds-WP_000191701.1;Parent=gene-AB11_RS06810;Dbxref=GenBank:WP_000191701.1;Name=WP_000191701.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AB11_RS06810;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191701.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 321274 325236 . - . ID=gene-AB11_RS06815;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AB11_RS06815;old_locus_tag=AB11_1057 NZ_JHDH01000102.1 Protein Homology CDS 321274 325236 . - 0 ID=cds-WP_001412957.1;Parent=gene-AB11_RS06815;Dbxref=GenBank:WP_001412957.1;Name=WP_001412957.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415534.1;locus_tag=AB11_RS06815;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001412957.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 325348 325500 . + . ID=gene-AB11_RS06820;Name=AB11_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS06820;old_locus_tag=AB11_1058 NZ_JHDH01000102.1 GeneMarkS-2+ CDS 325348 325500 . + 0 ID=cds-WP_001004556.1;Parent=gene-AB11_RS06820;Dbxref=GenBank:WP_001004556.1;Name=WP_001004556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS06820;product=hypothetical protein;protein_id=WP_001004556.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 325659 327167 . + . ID=gene-AB11_RS06825;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AB11_RS06825;old_locus_tag=AB11_1060 NZ_JHDH01000102.1 Protein Homology CDS 325659 327167 . + 0 ID=cds-WP_001018479.1;Parent=gene-AB11_RS06825;Dbxref=GenBank:WP_001018479.1;Name=WP_001018479.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AB11_RS06825;product=sodium/proline symporter PutP;protein_id=WP_001018479.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 327710 328540 . + . ID=gene-AB11_RS06830;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AB11_RS06830;old_locus_tag=AB11_1061 NZ_JHDH01000102.1 Protein Homology CDS 327710 328540 . + 0 ID=cds-WP_000497942.1;Parent=gene-AB11_RS06830;Dbxref=GenBank:WP_000497942.1;Name=WP_000497942.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AB11_RS06830;product=iron uptake transporter permease EfeU;protein_id=WP_000497942.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 328598 329725 . + . ID=gene-AB11_RS06835;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AB11_RS06835;old_locus_tag=AB11_1062 NZ_JHDH01000102.1 Protein Homology CDS 328598 329725 . + 0 ID=cds-WP_000154398.1;Parent=gene-AB11_RS06835;Dbxref=GenBank:WP_000154398.1;Name=WP_000154398.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415537.1;locus_tag=AB11_RS06835;product=iron uptake system protein EfeO;protein_id=WP_000154398.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 329731 331002 . + . ID=gene-AB11_RS06840;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AB11_RS06840;old_locus_tag=AB11_1063 NZ_JHDH01000102.1 Protein Homology CDS 329731 331002 . + 0 ID=cds-WP_001199471.1;Parent=gene-AB11_RS06840;Dbxref=GenBank:WP_001199471.1;Name=WP_001199471.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AB11_RS06840;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199471.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 331623 332411 . + . ID=gene-AB11_RS06845;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AB11_RS06845;old_locus_tag=AB11_1064 NZ_JHDH01000102.1 Protein Homology CDS 331623 332411 . + 0 ID=cds-WP_000533522.1;Parent=gene-AB11_RS06845;Dbxref=GenBank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AB11_RS06845;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 332461 332874 . - . ID=gene-AB11_RS06850;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AB11_RS06850;old_locus_tag=AB11_1065 NZ_JHDH01000102.1 Protein Homology CDS 332461 332874 . - 0 ID=cds-WP_001061095.1;Parent=gene-AB11_RS06850;Dbxref=GenBank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AB11_RS06850;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 332876 334201 . - . ID=gene-AB11_RS06855;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AB11_RS06855;old_locus_tag=AB11_1066 NZ_JHDH01000102.1 Protein Homology CDS 332876 334201 . - 0 ID=cds-WP_000610451.1;Parent=gene-AB11_RS06855;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AB11_RS06855;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 334194 336212 . - . ID=gene-AB11_RS06860;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AB11_RS06860;old_locus_tag=AB11_1067 NZ_JHDH01000102.1 Protein Homology CDS 334194 336212 . - 0 ID=cds-WP_000945561.1;Parent=gene-AB11_RS06860;Dbxref=GenBank:WP_000945561.1;Name=WP_000945561.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AB11_RS06860;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_000945561.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 336221 338644 . - . ID=gene-AB11_RS06865;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=AB11_RS06865;old_locus_tag=AB11_1068 NZ_JHDH01000102.1 Protein Homology CDS 336221 338644 . - 0 ID=cds-WP_000287458.1;Parent=gene-AB11_RS06865;Dbxref=GenBank:WP_000287458.1;Name=WP_000287458.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AB11_RS06865;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_000287458.1;transl_table=11 NZ_JHDH01000102.1 RefSeq gene 339231 340589 . + . ID=gene-AB11_RS06870;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=AB11_RS06870;old_locus_tag=AB11_1069 NZ_JHDH01000102.1 Protein Homology CDS 339231 340589 . + 0 ID=cds-WP_000409873.1;Parent=gene-AB11_RS06870;Dbxref=GenBank:WP_000409873.1;Name=WP_000409873.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcT;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415544.1;locus_tag=AB11_RS06870;product=GGDEF domain-containing protein;protein_id=WP_000409873.1;transl_table=11 NZ_JHDH01000102.1 RefSeq pseudogene 340630 340904 . - . ID=gene-AB11_RS06875;Name=AB11_RS06875;end_range=340904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS06875;old_locus_tag=AB11_1070;partial=true;pseudo=true NZ_JHDH01000102.1 Protein Homology CDS 340630 340904 . - 1 ID=cds-AB11_RS06875;Parent=gene-AB11_RS06875;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;end_range=340904,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS06875;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000103.1 1 156203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000103.1 RefSeq region 1 156203 . + . ID=NZ_JHDH01000103.1:1..156203;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000103.1 RefSeq pseudogene 1 615 . - . ID=gene-AB11_RS06880;Name=AB11_RS06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS06880;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000103.1 Protein Homology CDS 1 615 . - 0 ID=cds-AB11_RS06880;Parent=gene-AB11_RS06880;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS06880;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 668 1024 . + . ID=gene-AB11_RS06885;Name=AB11_RS06885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS06885;old_locus_tag=AB11_1073;partial=true;pseudo=true;start_range=.,668 NZ_JHDH01000103.1 Protein Homology CDS 668 1024 . + 0 ID=cds-AB11_RS06885;Parent=gene-AB11_RS06885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AB11_RS06885;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,668;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 1021 2007 . + . ID=gene-AB11_RS06890;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AB11_RS06890;old_locus_tag=AB11_1074 NZ_JHDH01000103.1 Protein Homology CDS 1021 2007 . + 0 ID=cds-WP_021570754.1-2;Parent=gene-AB11_RS06890;Dbxref=GenBank:WP_021570754.1;Name=WP_021570754.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AB11_RS06890;product=protein YcdU;protein_id=WP_021570754.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 2381 2517 . - . ID=gene-AB11_RS06895;Name=AB11_RS06895;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS06895 NZ_JHDH01000103.1 cmsearch ncRNA 2381 2517 . - . ID=rna-AB11_RS06895;Parent=gene-AB11_RS06895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS06895;product=RtT sRNA NZ_JHDH01000103.1 cmsearch exon 2381 2517 . - . ID=exon-AB11_RS06895-1;Parent=rna-AB11_RS06895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS06895;product=RtT sRNA NZ_JHDH01000103.1 RefSeq gene 2562 2649 . - . ID=gene-AB11_RS06900;Name=AB11_RS06900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS06900;old_locus_tag=AB11_1075 NZ_JHDH01000103.1 tRNAscan-SE tRNA 2562 2649 . - . ID=rna-AB11_RS06900;Parent=gene-AB11_RS06900;anticodon=(pos:complement(2613..2615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06900;product=tRNA-Ser NZ_JHDH01000103.1 tRNAscan-SE exon 2562 2649 . - . ID=exon-AB11_RS06900-1;Parent=rna-AB11_RS06900;anticodon=(pos:complement(2613..2615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS06900;product=tRNA-Ser NZ_JHDH01000103.1 RefSeq gene 2883 3821 . + . ID=gene-AB11_RS06905;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AB11_RS06905;old_locus_tag=AB11_1076 NZ_JHDH01000103.1 Protein Homology CDS 2883 3821 . + 0 ID=cds-WP_000351317.1;Parent=gene-AB11_RS06905;Dbxref=GenBank:WP_000351317.1;Name=WP_000351317.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AB11_RS06905;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351317.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 3876 4613 . + . ID=gene-AB11_RS06910;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AB11_RS06910;old_locus_tag=AB11_1077 NZ_JHDH01000103.1 Protein Homology CDS 3876 4613 . + 0 ID=cds-WP_000283667.1;Parent=gene-AB11_RS06910;Dbxref=GenBank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415552.1;locus_tag=AB11_RS06910;product=zinc-binding phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 4637 5191 . + . ID=gene-AB11_RS06915;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AB11_RS06915;old_locus_tag=AB11_1078 NZ_JHDH01000103.1 Protein Homology CDS 4637 5191 . + 0 ID=cds-WP_001001921.1;Parent=gene-AB11_RS06915;Dbxref=GenBank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AB11_RS06915;product=molecular chaperone YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 5293 5784 . + . ID=gene-AB11_RS06920;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AB11_RS06920;old_locus_tag=AB11_1079 NZ_JHDH01000103.1 Protein Homology CDS 5293 5784 . + 0 ID=cds-WP_001300785.1;Parent=gene-AB11_RS06920;Dbxref=GenBank:WP_001300785.1;Name=WP_001300785.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AB11_RS06920;product=DUF1097 domain-containing protein;protein_id=WP_001300785.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 5848 6681 . - . ID=gene-AB11_RS06925;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AB11_RS06925;old_locus_tag=AB11_1080 NZ_JHDH01000103.1 Protein Homology CDS 5848 6681 . - 0 ID=cds-WP_001189321.1;Parent=gene-AB11_RS06925;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AB11_RS06925;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 6708 7124 . - . ID=gene-AB11_RS06930;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AB11_RS06930;old_locus_tag=AB11_1081 NZ_JHDH01000103.1 Protein Homology CDS 6708 7124 . - 0 ID=cds-WP_001264088.1;Parent=gene-AB11_RS06930;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AB11_RS06930;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 7149 7538 . - . ID=gene-AB11_RS06935;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AB11_RS06935;old_locus_tag=AB11_1082 NZ_JHDH01000103.1 Protein Homology CDS 7149 7538 . - 0 ID=cds-WP_000833288.1;Parent=gene-AB11_RS06935;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AB11_RS06935;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 7543 8193 . - . ID=gene-AB11_RS06940;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AB11_RS06940;old_locus_tag=AB11_1083 NZ_JHDH01000103.1 Protein Homology CDS 7543 8193 . - 0 ID=cds-WP_000481505.1;Parent=gene-AB11_RS06940;Dbxref=GenBank:WP_000481505.1;Name=WP_000481505.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=AB11_RS06940;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481505.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 8948 9403 . + . ID=gene-AB11_RS06945;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AB11_RS06945;old_locus_tag=AB11_1086 NZ_JHDH01000103.1 Protein Homology CDS 8948 9403 . + 0 ID=cds-WP_001430282.1;Parent=gene-AB11_RS06945;Dbxref=GenBank:WP_001430282.1;Name=WP_001430282.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AB11_RS06945;product=curli minor subunit CsgB;protein_id=WP_001430282.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 9444 9899 . + . ID=gene-AB11_RS06950;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AB11_RS06950;old_locus_tag=AB11_1087 NZ_JHDH01000103.1 Protein Homology CDS 9444 9899 . + 0 ID=cds-WP_000771437.1;Parent=gene-AB11_RS06950;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AB11_RS06950;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 9958 10290 . + . ID=gene-AB11_RS06955;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AB11_RS06955;old_locus_tag=AB11_1088 NZ_JHDH01000103.1 Protein Homology CDS 9958 10290 . + 0 ID=cds-WP_001094300.1;Parent=gene-AB11_RS06955;Dbxref=GenBank:WP_001094300.1;Name=WP_001094300.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AB11_RS06955;product=curli assembly chaperone CsgC;protein_id=WP_001094300.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 10411 10722 . + . ID=gene-AB11_RS06960;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AB11_RS06960;old_locus_tag=AB11_1089 NZ_JHDH01000103.1 Protein Homology CDS 10411 10722 . + 0 ID=cds-WP_000489587.1;Parent=gene-AB11_RS06960;Dbxref=GenBank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415562.1;locus_tag=AB11_RS06960;product=protein YmdA;protein_id=WP_000489587.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 10817 11350 . + . ID=gene-AB11_RS06965;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AB11_RS06965;old_locus_tag=AB11_1090 NZ_JHDH01000103.1 Protein Homology CDS 10817 11350 . + 0 ID=cds-WP_000857405.1;Parent=gene-AB11_RS06965;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AB11_RS06965;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 11292 12773 . + . ID=gene-AB11_RS06970;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AB11_RS06970;old_locus_tag=AB11_1091 NZ_JHDH01000103.1 Protein Homology CDS 11292 12773 . + 0 ID=cds-WP_001307714.1;Parent=gene-AB11_RS06970;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AB11_RS06970;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 12781 13938 . - . ID=gene-AB11_RS06975;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AB11_RS06975;old_locus_tag=AB11_1092 NZ_JHDH01000103.1 Protein Homology CDS 12781 13938 . - 0 ID=cds-WP_001070375.1;Parent=gene-AB11_RS06975;Dbxref=GenBank:WP_001070375.1;Name=WP_001070375.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415565.1;locus_tag=AB11_RS06975;product=glucans biosynthesis protein MdoC;protein_id=WP_001070375.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 14332 15867 . + . ID=gene-AB11_RS06980;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AB11_RS06980;old_locus_tag=AB11_1094 NZ_JHDH01000103.1 Protein Homology CDS 14332 15867 . + 0 ID=cds-WP_001343212.1;Parent=gene-AB11_RS06980;Dbxref=GenBank:WP_001343212.1;Name=WP_001343212.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AB11_RS06980;product=glucans biosynthesis protein MdoG;protein_id=WP_001343212.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 15860 18403 . + . ID=gene-AB11_RS06985;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AB11_RS06985;old_locus_tag=AB11_1095 NZ_JHDH01000103.1 Protein Homology CDS 15860 18403 . + 0 ID=cds-WP_001295445.1;Parent=gene-AB11_RS06985;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AB11_RS06985;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 18576 18803 . + . ID=gene-AB11_RS06990;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AB11_RS06990;old_locus_tag=AB11_1096 NZ_JHDH01000103.1 Protein Homology CDS 18576 18803 . + 0 ID=cds-WP_001237205.1;Parent=gene-AB11_RS06990;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AB11_RS06990;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 18804 19178 . - . ID=gene-AB11_RS06995;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AB11_RS06995;old_locus_tag=AB11_1097 NZ_JHDH01000103.1 Protein Homology CDS 18804 19178 . - 0 ID=cds-WP_000180056.1;Parent=gene-AB11_RS06995;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AB11_RS06995;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 19261 20487 . - . ID=gene-AB11_RS07000;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AB11_RS07000;old_locus_tag=AB11_1098 NZ_JHDH01000103.1 Protein Homology CDS 19261 20487 . - 0 ID=cds-WP_032223141.1;Parent=gene-AB11_RS07000;Dbxref=GenBank:WP_032223141.1;Name=WP_032223141.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AB11_RS07000;product=multidrug efflux MFS transporter MdtG;protein_id=WP_032223141.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 20659 21579 . - . ID=gene-AB11_RS07005;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AB11_RS07005;old_locus_tag=AB11_1099 NZ_JHDH01000103.1 Protein Homology CDS 20659 21579 . - 0 ID=cds-WP_000183364.1;Parent=gene-AB11_RS07005;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AB11_RS07005;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 21804 22856 . + . ID=gene-AB11_RS07010;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=AB11_RS07010;old_locus_tag=AB11_1100 NZ_JHDH01000103.1 Protein Homology CDS 21804 22856 . + 0 ID=cds-WP_001144615.1;Parent=gene-AB11_RS07010;Dbxref=GenBank:WP_001144615.1;Name=WP_001144615.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415573.1;locus_tag=AB11_RS07010;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001144615.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 22898 23473 . - . ID=gene-AB11_RS07015;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AB11_RS07015;old_locus_tag=AB11_1101 NZ_JHDH01000103.1 Protein Homology CDS 22898 23473 . - 0 ID=cds-WP_000749261.1;Parent=gene-AB11_RS07015;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AB11_RS07015;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 23477 24043 . - . ID=gene-AB11_RS07020;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=AB11_RS07020;old_locus_tag=AB11_1102 NZ_JHDH01000103.1 Protein Homology CDS 23477 24043 . - 0 ID=cds-WP_000011114.1;Parent=gene-AB11_RS07020;Dbxref=GenBank:WP_000011114.1;Name=WP_000011114.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415575.1;locus_tag=AB11_RS07020;product=cytochrome b;protein_id=WP_000011114.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 24304 24417 . - . ID=gene-AB11_RS07025;Name=AB11_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07025;old_locus_tag=AB11_1104 NZ_JHDH01000103.1 Protein Homology CDS 24304 24417 . - 0 ID=cds-WP_001253418.1;Parent=gene-AB11_RS07025;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AB11_RS07025;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 24465 25583 . - . ID=gene-AB11_RS07030;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AB11_RS07030;old_locus_tag=AB11_1105 NZ_JHDH01000103.1 Protein Homology CDS 24465 25583 . - 0 ID=cds-WP_000872833.1;Parent=gene-AB11_RS07030;Dbxref=GenBank:WP_000872833.1;Name=WP_000872833.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415577.1;locus_tag=AB11_RS07030;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872833.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 25698 25952 . - . ID=gene-AB11_RS07035;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AB11_RS07035;old_locus_tag=AB11_1106 NZ_JHDH01000103.1 Protein Homology CDS 25698 25952 . - 0 ID=cds-WP_000414438.1;Parent=gene-AB11_RS07035;Dbxref=GenBank:WP_000414438.1;Name=WP_000414438.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415578.3;locus_tag=AB11_RS07035;product=biofilm formation regulator BssS;protein_id=WP_000414438.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 26240 26485 . - . ID=gene-AB11_RS07040;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AB11_RS07040;old_locus_tag=AB11_1107 NZ_JHDH01000103.1 Protein Homology CDS 26240 26485 . - 0 ID=cds-WP_001217754.1;Parent=gene-AB11_RS07040;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AB11_RS07040;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 26559 27605 . - . ID=gene-AB11_RS07045;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AB11_RS07045;old_locus_tag=AB11_1108 NZ_JHDH01000103.1 Protein Homology CDS 26559 27605 . - 0 ID=cds-WP_000126534.1;Parent=gene-AB11_RS07045;Dbxref=GenBank:WP_000126534.1;Name=WP_000126534.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AB11_RS07045;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 27711 28271 . - . ID=gene-AB11_RS07050;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AB11_RS07050;old_locus_tag=AB11_1109 NZ_JHDH01000103.1 Protein Homology CDS 27711 28271 . - 0 ID=cds-WP_001295443.1;Parent=gene-AB11_RS07050;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AB11_RS07050;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 28405 29052 . - . ID=gene-AB11_RS07055;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AB11_RS07055;old_locus_tag=AB11_1110 NZ_JHDH01000103.1 Protein Homology CDS 28405 29052 . - 0 ID=cds-WP_000780912.1;Parent=gene-AB11_RS07055;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AB11_RS07055;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 29116 30324 . - . ID=gene-AB11_RS07060;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AB11_RS07060;old_locus_tag=AB11_1111 NZ_JHDH01000103.1 Protein Homology CDS 29116 30324 . - 0 ID=cds-WP_000092206.1;Parent=gene-AB11_RS07060;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AB11_RS07060;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 30560 31144 . + . ID=gene-AB11_RS07065;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AB11_RS07065;old_locus_tag=AB11_1112 NZ_JHDH01000103.1 Protein Homology CDS 30560 31144 . + 0 ID=cds-WP_000468186.1;Parent=gene-AB11_RS07065;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AB11_RS07065;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 31155 31802 . + . ID=gene-AB11_RS07070;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AB11_RS07070;old_locus_tag=AB11_1113 NZ_JHDH01000103.1 Protein Homology CDS 31155 31802 . + 0 ID=cds-WP_000877107.1;Parent=gene-AB11_RS07070;Dbxref=GenBank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415585.1;locus_tag=AB11_RS07070;product=YceH family protein;protein_id=WP_000877107.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 31804 32727 . + . ID=gene-AB11_RS07075;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AB11_RS07075;old_locus_tag=AB11_1114 NZ_JHDH01000103.1 Protein Homology CDS 31804 32727 . + 0 ID=cds-WP_000736158.1;Parent=gene-AB11_RS07075;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AB11_RS07075;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 32837 34372 . + . ID=gene-AB11_RS07080;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AB11_RS07080;old_locus_tag=AB11_1115 NZ_JHDH01000103.1 Protein Homology CDS 32837 34372 . + 0 ID=cds-WP_001050683.1;Parent=gene-AB11_RS07080;Dbxref=GenBank:WP_001050683.1;Name=WP_001050683.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AB11_RS07080;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 34412 34828 . - . ID=gene-AB11_RS07085;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AB11_RS07085;old_locus_tag=AB11_1116 NZ_JHDH01000103.1 Protein Homology CDS 34412 34828 . - 0 ID=cds-WP_000197363.1;Parent=gene-AB11_RS07085;Dbxref=GenBank:WP_000197363.1;Name=WP_000197363.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AB11_RS07085;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197363.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 34833 35126 . - . ID=gene-AB11_RS07090;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AB11_RS07090;old_locus_tag=AB11_1117 NZ_JHDH01000103.1 Protein Homology CDS 34833 35126 . - 0 ID=cds-WP_000020880.1;Parent=gene-AB11_RS07090;Dbxref=GenBank:WP_000020880.1;Name=WP_000020880.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AB11_RS07090;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 35202 35861 . - . ID=gene-AB11_RS07095;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AB11_RS07095;old_locus_tag=AB11_1118 NZ_JHDH01000103.1 Protein Homology CDS 35202 35861 . - 0 ID=cds-WP_000905458.1;Parent=gene-AB11_RS07095;Dbxref=GenBank:WP_000905458.1;Name=WP_000905458.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AB11_RS07095;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000905458.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 36016 36432 . + . ID=gene-AB11_RS07100;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AB11_RS07100;old_locus_tag=AB11_1120 NZ_JHDH01000103.1 Protein Homology CDS 36016 36432 . + 0 ID=cds-WP_000884702.1;Parent=gene-AB11_RS07100;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AB11_RS07100;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 36436 36840 . + . ID=gene-AB11_RS07105;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AB11_RS07105;old_locus_tag=AB11_1121 NZ_JHDH01000103.1 Protein Homology CDS 36436 36840 . + 0 ID=cds-WP_001196460.1;Parent=gene-AB11_RS07105;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AB11_RS07105;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 36852 37547 . + . ID=gene-AB11_RS07110;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AB11_RS07110;old_locus_tag=AB11_1122 NZ_JHDH01000103.1 Protein Homology CDS 36852 37547 . + 0 ID=cds-WP_000020486.1;Parent=gene-AB11_RS07110;Dbxref=GenBank:WP_000020486.1;Name=WP_000020486.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415593.1;locus_tag=AB11_RS07110;product=flagellar hook assembly protein FlgD;protein_id=WP_000020486.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 37572 38780 . + . ID=gene-AB11_RS07115;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AB11_RS07115;old_locus_tag=AB11_1123 NZ_JHDH01000103.1 Protein Homology CDS 37572 38780 . + 0 ID=cds-WP_000885873.1;Parent=gene-AB11_RS07115;Dbxref=GenBank:WP_000885873.1;Name=WP_000885873.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AB11_RS07115;product=flagellar hook protein FlgE;protein_id=WP_000885873.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 38800 39555 . + . ID=gene-AB11_RS07120;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AB11_RS07120;old_locus_tag=AB11_1124 NZ_JHDH01000103.1 Protein Homology CDS 38800 39555 . + 0 ID=cds-WP_000349316.1;Parent=gene-AB11_RS07120;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AB11_RS07120;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 39727 40509 . + . ID=gene-AB11_RS07125;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AB11_RS07125;old_locus_tag=AB11_1125 NZ_JHDH01000103.1 Protein Homology CDS 39727 40509 . + 0 ID=cds-WP_000625837.1;Parent=gene-AB11_RS07125;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AB11_RS07125;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 40562 41260 . + . ID=gene-AB11_RS07130;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AB11_RS07130;old_locus_tag=AB11_1126 NZ_JHDH01000103.1 Protein Homology CDS 40562 41260 . + 0 ID=cds-WP_001295442.1;Parent=gene-AB11_RS07130;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AB11_RS07130;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 41272 42369 . + . ID=gene-AB11_RS07135;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AB11_RS07135;old_locus_tag=AB11_1127 NZ_JHDH01000103.1 Protein Homology CDS 41272 42369 . + 0 ID=cds-WP_000589326.1;Parent=gene-AB11_RS07135;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AB11_RS07135;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 42369 43310 . + . ID=gene-AB11_RS07140;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AB11_RS07140;old_locus_tag=AB11_1128 NZ_JHDH01000103.1 Protein Homology CDS 42369 43310 . + 0 ID=cds-WP_001295441.1;Parent=gene-AB11_RS07140;Dbxref=GenBank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AB11_RS07140;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 43376 45019 . + . ID=gene-AB11_RS07145;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AB11_RS07145;old_locus_tag=AB11_1129 NZ_JHDH01000103.1 Protein Homology CDS 43376 45019 . + 0 ID=cds-WP_000096479.1;Parent=gene-AB11_RS07145;Dbxref=GenBank:WP_000096479.1;Name=WP_000096479.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AB11_RS07145;product=flagellar hook-associated protein FlgK;protein_id=WP_000096479.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 45031 45984 . + . ID=gene-AB11_RS07150;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AB11_RS07150;old_locus_tag=AB11_1130 NZ_JHDH01000103.1 Protein Homology CDS 45031 45984 . + 0 ID=cds-WP_001212782.1;Parent=gene-AB11_RS07150;Dbxref=GenBank:WP_001212782.1;Name=WP_001212782.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AB11_RS07150;product=flagellar hook-associated protein FlgL;protein_id=WP_001212782.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 46180 49365 . - . ID=gene-AB11_RS07155;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AB11_RS07155;old_locus_tag=AB11_1131 NZ_JHDH01000103.1 Protein Homology CDS 46180 49365 . - 0 ID=cds-WP_000827360.1;Parent=gene-AB11_RS07155;Dbxref=GenBank:WP_000827360.1;Name=WP_000827360.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=AB11_RS07155;product=ribonuclease E;protein_id=WP_000827360.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 49938 50897 . + . ID=gene-AB11_RS07160;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AB11_RS07160;old_locus_tag=AB11_1133 NZ_JHDH01000103.1 Protein Homology CDS 49938 50897 . + 0 ID=cds-WP_000846343.1;Parent=gene-AB11_RS07160;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AB11_RS07160;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 51009 51593 . - . ID=gene-AB11_RS07165;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AB11_RS07165;old_locus_tag=AB11_1134 NZ_JHDH01000103.1 Protein Homology CDS 51009 51593 . - 0 ID=cds-WP_001125202.1;Parent=gene-AB11_RS07165;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AB11_RS07165;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 51792 52313 . + . ID=gene-AB11_RS07170;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AB11_RS07170;old_locus_tag=AB11_1135 NZ_JHDH01000103.1 Protein Homology CDS 51792 52313 . + 0 ID=cds-WP_001174481.1;Parent=gene-AB11_RS07170;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AB11_RS07170;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 52365 52538 . + . ID=gene-AB11_RS07175;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AB11_RS07175;old_locus_tag=AB11_1136 NZ_JHDH01000103.1 Protein Homology CDS 52365 52538 . + 0 ID=cds-WP_000290727.1;Parent=gene-AB11_RS07175;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AB11_RS07175;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 52619 53689 . + . ID=gene-AB11_RS07180;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AB11_RS07180;old_locus_tag=AB11_1137 NZ_JHDH01000103.1 Protein Homology CDS 52619 53689 . + 0 ID=cds-WP_000197578.1;Parent=gene-AB11_RS07180;Dbxref=GenBank:WP_000197578.1;Name=WP_000197578.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AB11_RS07180;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 53757 54710 . + . ID=gene-AB11_RS07185;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AB11_RS07185;old_locus_tag=AB11_1138 NZ_JHDH01000103.1 Protein Homology CDS 53757 54710 . + 0 ID=cds-WP_000288132.1;Parent=gene-AB11_RS07185;Dbxref=GenBank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AB11_RS07185;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 54726 55655 . + . ID=gene-AB11_RS07190;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AB11_RS07190;old_locus_tag=AB11_1139 NZ_JHDH01000103.1 Protein Homology CDS 54726 55655 . + 0 ID=cds-WP_000191372.1;Parent=gene-AB11_RS07190;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AB11_RS07190;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 55668 56402 . + . ID=gene-AB11_RS07195;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AB11_RS07195;old_locus_tag=AB11_1140 NZ_JHDH01000103.1 Protein Homology CDS 55668 56402 . + 0 ID=cds-WP_001008535.1;Parent=gene-AB11_RS07195;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AB11_RS07195;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 56613 56849 . + . ID=gene-AB11_RS07200;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AB11_RS07200;old_locus_tag=AB11_1141 NZ_JHDH01000103.1 Protein Homology CDS 56613 56849 . + 0 ID=cds-WP_000103754.1;Parent=gene-AB11_RS07200;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AB11_RS07200;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 56937 58178 . + . ID=gene-AB11_RS07205;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AB11_RS07205;old_locus_tag=AB11_1142 NZ_JHDH01000103.1 Protein Homology CDS 56937 58178 . + 0 ID=cds-WP_000044679.1;Parent=gene-AB11_RS07205;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AB11_RS07205;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 58298 59107 . + . ID=gene-AB11_RS07210;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AB11_RS07210;old_locus_tag=AB11_1143 NZ_JHDH01000103.1 Protein Homology CDS 58298 59107 . + 0 ID=cds-WP_000478681.1;Parent=gene-AB11_RS07210;Dbxref=GenBank:WP_000478681.1;Name=WP_000478681.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415614.1;locus_tag=AB11_RS07210;product=aminodeoxychorismate lyase;protein_id=WP_000478681.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 59110 60132 . + . ID=gene-AB11_RS07215;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AB11_RS07215;old_locus_tag=AB11_1144 NZ_JHDH01000103.1 Protein Homology CDS 59110 60132 . + 0 ID=cds-WP_000756827.1;Parent=gene-AB11_RS07215;Dbxref=GenBank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AB11_RS07215;product=cell division protein YceG;protein_id=WP_000756827.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 60122 60763 . + . ID=gene-AB11_RS07220;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AB11_RS07220;old_locus_tag=AB11_1145 NZ_JHDH01000103.1 Protein Homology CDS 60122 60763 . + 0 ID=cds-WP_001257000.1;Parent=gene-AB11_RS07220;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AB11_RS07220;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 60760 61764 . + . ID=gene-AB11_RS07225;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AB11_RS07225;old_locus_tag=AB11_1146 NZ_JHDH01000103.1 Protein Homology CDS 60760 61764 . + 0 ID=cds-WP_001267956.1;Parent=gene-AB11_RS07225;Dbxref=GenBank:WP_001267956.1;Name=WP_001267956.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415617.1;locus_tag=AB11_RS07225;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 61775 62572 . + . ID=gene-AB11_RS07230;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AB11_RS07230;old_locus_tag=AB11_1147 NZ_JHDH01000103.1 Protein Homology CDS 61775 62572 . + 0 ID=cds-WP_000480245.1;Parent=gene-AB11_RS07230;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AB11_RS07230;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 62867 64300 . + . ID=gene-AB11_RS07235;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AB11_RS07235;old_locus_tag=AB11_1148 NZ_JHDH01000103.1 Protein Homology CDS 62867 64300 . + 0 ID=cds-WP_000475719.1;Parent=gene-AB11_RS07235;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AB11_RS07235;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 64360 66549 . - . ID=gene-AB11_RS07240;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AB11_RS07240;old_locus_tag=AB11_1149 NZ_JHDH01000103.1 Protein Homology CDS 64360 66549 . - 0 ID=cds-WP_000953441.1;Parent=gene-AB11_RS07240;Dbxref=GenBank:WP_000953441.1;Name=WP_000953441.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415620.1;locus_tag=AB11_RS07240;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000953441.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 66883 67242 . + . ID=gene-AB11_RS07245;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AB11_RS07245;old_locus_tag=AB11_1150 NZ_JHDH01000103.1 Protein Homology CDS 66883 67242 . + 0 ID=cds-WP_000807125.1;Parent=gene-AB11_RS07245;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AB11_RS07245;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 67245 67622 . + . ID=gene-AB11_RS07250;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AB11_RS07250;old_locus_tag=AB11_1151 NZ_JHDH01000103.1 Protein Homology CDS 67245 67622 . + 0 ID=cds-WP_001225295.1;Parent=gene-AB11_RS07250;Dbxref=GenBank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415622.1;locus_tag=AB11_RS07250;product=YcfL family protein;protein_id=WP_001225295.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 67636 68277 . + . ID=gene-AB11_RS07255;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AB11_RS07255;old_locus_tag=AB11_1152 NZ_JHDH01000103.1 Protein Homology CDS 67636 68277 . + 0 ID=cds-WP_000164439.1;Parent=gene-AB11_RS07255;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AB11_RS07255;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 68258 69082 . + . ID=gene-AB11_RS07260;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AB11_RS07260;old_locus_tag=AB11_1153 NZ_JHDH01000103.1 Protein Homology CDS 68258 69082 . + 0 ID=cds-WP_032223147.1;Parent=gene-AB11_RS07260;Dbxref=GenBank:WP_032223147.1;Name=WP_032223147.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415624.1;locus_tag=AB11_RS07260;product=thiamine kinase;protein_id=WP_032223147.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 69093 70118 . + . ID=gene-AB11_RS07265;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AB11_RS07265;old_locus_tag=AB11_1154 NZ_JHDH01000103.1 Protein Homology CDS 69093 70118 . + 0 ID=cds-WP_000529320.1;Parent=gene-AB11_RS07265;Dbxref=GenBank:WP_000529320.1;Name=WP_000529320.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AB11_RS07265;product=beta-N-acetylhexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 70141 70683 . + . ID=gene-AB11_RS07270;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AB11_RS07270;old_locus_tag=AB11_1155 NZ_JHDH01000103.1 Protein Homology CDS 70141 70683 . + 0 ID=cds-WP_000587933.1;Parent=gene-AB11_RS07270;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AB11_RS07270;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 71083 72387 . + . ID=gene-AB11_RS07275;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AB11_RS07275;old_locus_tag=AB11_1156 NZ_JHDH01000103.1 Protein Homology CDS 71083 72387 . + 0 ID=cds-WP_000211045.1;Parent=gene-AB11_RS07275;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AB11_RS07275;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 72597 73136 . + . ID=gene-AB11_RS07280;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AB11_RS07280;old_locus_tag=AB11_1157 NZ_JHDH01000103.1 Protein Homology CDS 72597 73136 . + 0 ID=cds-WP_001043459.1;Parent=gene-AB11_RS07280;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AB11_RS07280;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 73198 73830 . - . ID=gene-AB11_RS07285;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AB11_RS07285;old_locus_tag=AB11_1158 NZ_JHDH01000103.1 Protein Homology CDS 73198 73830 . - 0 ID=cds-WP_001336528.1;Parent=gene-AB11_RS07285;Dbxref=GenBank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AB11_RS07285;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_001336528.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 74071 74328 . + . ID=gene-AB11_RS07290;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AB11_RS07290;old_locus_tag=AB11_1159 NZ_JHDH01000103.1 Protein Homology CDS 74071 74328 . + 0 ID=cds-WP_000800153.1;Parent=gene-AB11_RS07290;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AB11_RS07290;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 74410 75372 . - . ID=gene-AB11_RS07295;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AB11_RS07295;old_locus_tag=AB11_1160 NZ_JHDH01000103.1 Protein Homology CDS 74410 75372 . - 0 ID=cds-WP_001300895.1;Parent=gene-AB11_RS07295;Dbxref=GenBank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AB11_RS07295;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 75516 78962 . - . ID=gene-AB11_RS07300;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AB11_RS07300;old_locus_tag=AB11_1161 NZ_JHDH01000103.1 Protein Homology CDS 75516 78962 . - 0 ID=cds-WP_001115094.1;Parent=gene-AB11_RS07300;Dbxref=GenBank:WP_001115094.1;Name=WP_001115094.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AB11_RS07300;product=transcription-repair coupling factor;protein_id=WP_001115094.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 79090 80163 . - . ID=gene-AB11_RS07305;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AB11_RS07305;old_locus_tag=AB11_1162 NZ_JHDH01000103.1 Protein Homology CDS 79090 80163 . - 0 ID=cds-WP_000810253.1;Parent=gene-AB11_RS07305;Dbxref=GenBank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AB11_RS07305;product=acyltransferase family protein;protein_id=WP_000810253.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 80425 81624 . + . ID=gene-AB11_RS07310;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AB11_RS07310;old_locus_tag=AB11_1163 NZ_JHDH01000103.1 Protein Homology CDS 80425 81624 . + 0 ID=cds-WP_000284714.1;Parent=gene-AB11_RS07310;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AB11_RS07310;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 81617 82318 . + . ID=gene-AB11_RS07315;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AB11_RS07315;old_locus_tag=AB11_1164 NZ_JHDH01000103.1 Protein Homology CDS 81617 82318 . + 0 ID=cds-WP_001033694.1;Parent=gene-AB11_RS07315;Dbxref=GenBank:WP_001033694.1;Name=WP_001033694.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=AB11_RS07315;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 82318 83562 . + . ID=gene-AB11_RS07320;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AB11_RS07320;old_locus_tag=AB11_1165 NZ_JHDH01000103.1 Protein Homology CDS 82318 83562 . + 0 ID=cds-WP_001251348.1;Parent=gene-AB11_RS07320;Dbxref=GenBank:WP_001251348.1;Name=WP_001251348.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AB11_RS07320;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 83591 84502 . + . ID=gene-AB11_RS07325;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AB11_RS07325;old_locus_tag=AB11_1166 NZ_JHDH01000103.1 Protein Homology CDS 83591 84502 . + 0 ID=cds-WP_000291270.1;Parent=gene-AB11_RS07325;Dbxref=GenBank:WP_000291270.1;Name=WP_000291270.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AB11_RS07325;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 84518 85357 . + . ID=gene-AB11_RS07330;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AB11_RS07330;old_locus_tag=AB11_1167 NZ_JHDH01000103.1 Protein Homology CDS 84518 85357 . + 0 ID=cds-WP_000952737.1;Parent=gene-AB11_RS07330;Dbxref=GenBank:WP_000952737.1;Name=WP_000952737.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AB11_RS07330;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 85477 86265 . - . ID=gene-AB11_RS07335;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AB11_RS07335;old_locus_tag=AB11_1168 NZ_JHDH01000103.1 Protein Homology CDS 85477 86265 . - 0 ID=cds-WP_000713462.1;Parent=gene-AB11_RS07335;Dbxref=GenBank:WP_000713462.1;Name=WP_000713462.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AB11_RS07335;product=TPM domain-containing protein;protein_id=WP_000713462.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 86262 86723 . - . ID=gene-AB11_RS07340;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;locus_tag=AB11_RS07340;old_locus_tag=AB11_1169 NZ_JHDH01000103.1 Protein Homology CDS 86262 86723 . - 0 ID=cds-WP_000076376.1;Parent=gene-AB11_RS07340;Dbxref=GenBank:WP_000076376.1;Name=WP_000076376.1;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AB11_RS07340;product=DUF3592 domain-containing protein;protein_id=WP_000076376.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 86781 87827 . - . ID=gene-AB11_RS07345;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AB11_RS07345;old_locus_tag=AB11_1170 NZ_JHDH01000103.1 Protein Homology CDS 86781 87827 . - 0 ID=cds-WP_000759317.1;Parent=gene-AB11_RS07345;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AB11_RS07345;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 87824 88618 . - . ID=gene-AB11_RS07350;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AB11_RS07350;old_locus_tag=AB11_1171 NZ_JHDH01000103.1 Protein Homology CDS 87824 88618 . - 0 ID=cds-WP_000580316.1;Parent=gene-AB11_RS07350;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AB11_RS07350;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 88785 89903 . - . ID=gene-AB11_RS07355;Name=AB11_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07355;old_locus_tag=AB11_1172 NZ_JHDH01000103.1 Protein Homology CDS 88785 89903 . - 0 ID=cds-WP_032223150.1;Parent=gene-AB11_RS07355;Dbxref=GenBank:WP_032223150.1;Name=WP_032223150.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309528.1;locus_tag=AB11_RS07355;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_032223150.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 89872 90141 . - . ID=gene-AB11_RS07360;Name=AB11_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07360;old_locus_tag=AB11_1173 NZ_JHDH01000103.1 Protein Homology CDS 89872 90141 . - 0 ID=cds-WP_032223153.1;Parent=gene-AB11_RS07360;Dbxref=GenBank:WP_032223153.1;Name=WP_032223153.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309529.1;locus_tag=AB11_RS07360;product=excisionase;protein_id=WP_032223153.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 90203 92674 . - . ID=gene-AB11_RS07365;Name=AB11_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07365;old_locus_tag=AB11_1174 NZ_JHDH01000103.1 Protein Homology CDS 90203 92674 . - 0 ID=cds-WP_032223156.1;Parent=gene-AB11_RS07365;Dbxref=GenBank:WP_032223156.1;Name=WP_032223156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309084.1;locus_tag=AB11_RS07365;product=exonuclease;protein_id=WP_032223156.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 92770 92958 . - . ID=gene-AB11_RS07370;Name=AB11_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07370;old_locus_tag=AB11_1175 NZ_JHDH01000103.1 Protein Homology CDS 92770 92958 . - 0 ID=cds-WP_000199485.1;Parent=gene-AB11_RS07370;Dbxref=GenBank:WP_000199485.1;Name=WP_000199485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310796.1;locus_tag=AB11_RS07370;product=DUF1482 family protein;protein_id=WP_000199485.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 92955 93143 . - . ID=gene-AB11_RS07375;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AB11_RS07375;old_locus_tag=AB11_1176 NZ_JHDH01000103.1 Protein Homology CDS 92955 93143 . - 0 ID=cds-WP_000449168.1;Parent=gene-AB11_RS07375;Dbxref=GenBank:WP_000449168.1;Name=WP_000449168.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310795.1;locus_tag=AB11_RS07375;product=cell division inhibition protein DicB;protein_id=WP_000449168.1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 94068 94218 . - . ID=gene-AB11_RS26045;Name=AB11_RS26045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26045;partial=true;pseudo=true;start_range=.,94068 NZ_JHDH01000103.1 Protein Homology CDS 94068 94218 . - 0 ID=cds-AB11_RS26045;Parent=gene-AB11_RS26045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310238.1;locus_tag=AB11_RS26045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,94068;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 94230 94382 . - . ID=gene-AB11_RS07385;Name=AB11_RS07385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07385;pseudo=true NZ_JHDH01000103.1 Protein Homology CDS 94230 94382 . - 0 ID=cds-AB11_RS07385;Parent=gene-AB11_RS07385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379546.1;locus_tag=AB11_RS07385;product=DUF1391 family protein;pseudo=true;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 94702 95178 . - . ID=gene-AB11_RS07390;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;locus_tag=AB11_RS07390 NZ_JHDH01000103.1 Protein Homology CDS 94702 95178 . - 0 ID=cds-WP_032223161.1;Parent=gene-AB11_RS07390;Dbxref=GenBank:WP_032223161.1;Name=WP_032223161.1;Ontology_term=GO:2000143,GO:0001217;gbkey=CDS;gene=racR;go_function=DNA-binding transcription repressor activity|0001217||IEA;go_process=negative regulation of DNA-templated transcription initiation|2000143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415874.1;locus_tag=AB11_RS07390;product=DNA-binding transcriptional repressor RacR;protein_id=WP_032223161.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 95304 95627 . + . ID=gene-AB11_RS07395;Name=AB11_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07395 NZ_JHDH01000103.1 Protein Homology CDS 95304 95627 . + 0 ID=cds-WP_032223163.1;Parent=gene-AB11_RS07395;Dbxref=GenBank:WP_032223163.1;Name=WP_032223163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309534.1;locus_tag=AB11_RS07395;product=helix-turn-helix domain-containing protein;protein_id=WP_032223163.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 95611 96036 . + . ID=gene-AB11_RS07400;Name=AB11_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07400;old_locus_tag=AB11_1181 NZ_JHDH01000103.1 Protein Homology CDS 95611 96036 . + 0 ID=cds-WP_032223165.1;Parent=gene-AB11_RS07400;Dbxref=GenBank:WP_032223165.1;Name=WP_032223165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309098.1;locus_tag=AB11_RS07400;product=toxin YdaT family protein;protein_id=WP_032223165.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 96072 96266 . + . ID=gene-AB11_RS07405;Name=AB11_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07405;old_locus_tag=AB11_1182 NZ_JHDH01000103.1 GeneMarkS-2+ CDS 96072 96266 . + 0 ID=cds-WP_135247427.1;Parent=gene-AB11_RS07405;Dbxref=GenBank:WP_135247427.1;Name=WP_135247427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS07405;product=hypothetical protein;protein_id=WP_135247427.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 96271 96666 . - . ID=gene-AB11_RS07410;Name=AB11_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07410 NZ_JHDH01000103.1 GeneMarkS-2+ CDS 96271 96666 . - 0 ID=cds-WP_000344866.1;Parent=gene-AB11_RS07410;Dbxref=GenBank:WP_000344866.1;Name=WP_000344866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS07410;product=hypothetical protein;protein_id=WP_000344866.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 96746 97831 . + . ID=gene-AB11_RS07415;Name=AB11_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07415;old_locus_tag=AB11_1184 NZ_JHDH01000103.1 Protein Homology CDS 96746 97831 . + 0 ID=cds-WP_032223169.1;Parent=gene-AB11_RS07415;Dbxref=GenBank:WP_032223169.1;Name=WP_032223169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309100.1;locus_tag=AB11_RS07415;product=DNA-binding protein;protein_id=WP_032223169.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 97872 98297 . + . ID=gene-AB11_RS07420;Name=AB11_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07420;old_locus_tag=AB11_1185 NZ_JHDH01000103.1 Protein Homology CDS 97872 98297 . + 0 ID=cds-WP_001151231.1;Parent=gene-AB11_RS07420;Dbxref=GenBank:WP_001151231.1;Name=WP_001151231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309975.1;locus_tag=AB11_RS07420;product=DUF977 family protein;protein_id=WP_001151231.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 98355 98711 . + . ID=gene-AB11_RS07425;Name=AB11_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07425;old_locus_tag=AB11_1186 NZ_JHDH01000103.1 Protein Homology CDS 98355 98711 . + 0 ID=cds-WP_032223213.1;Parent=gene-AB11_RS07425;Dbxref=GenBank:WP_032223213.1;Name=WP_032223213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514295.1;locus_tag=AB11_RS07425;product=hypothetical protein;protein_id=WP_032223213.1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 98806 99168 . + . ID=gene-AB11_RS07430;Name=AB11_RS07430;end_range=99168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07430;old_locus_tag=AB11_1187;partial=true;pseudo=true NZ_JHDH01000103.1 Protein Homology CDS 98806 99168 . + 0 ID=cds-AB11_RS07430;Parent=gene-AB11_RS07430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=99168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589611.1;locus_tag=AB11_RS07430;partial=true;product=valyl-tRNA synthetase;pseudo=true;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 99171 99653 . + . ID=gene-AB11_RS26050;Name=AB11_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26050;old_locus_tag=AB11_1188 NZ_JHDH01000103.1 Protein Homology CDS 99171 99653 . + 0 ID=cds-WP_032223172.1;Parent=gene-AB11_RS26050;Dbxref=GenBank:WP_032223172.1;Name=WP_032223172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406038.1;locus_tag=AB11_RS26050;product=hypothetical protein;protein_id=WP_032223172.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 99944 100099 . + . ID=gene-AB11_RS07440;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AB11_RS07440 NZ_JHDH01000103.1 Protein Homology CDS 99944 100099 . + 0 ID=cds-WP_000813258.1;Parent=gene-AB11_RS07440;Dbxref=GenBank:WP_000813258.1;Name=WP_000813258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hokD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB11_RS07440;product=Hok/Gef family protein;protein_id=WP_000813258.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 100268 100540 . + . ID=gene-AB11_RS07445;Name=AB11_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07445 NZ_JHDH01000103.1 Protein Homology CDS 100268 100540 . + 0 ID=cds-WP_032223175.1;Parent=gene-AB11_RS07445;Dbxref=GenBank:WP_032223175.1;Name=WP_032223175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309802.1;locus_tag=AB11_RS07445;product=hypothetical protein;protein_id=WP_032223175.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 100542 101591 . + . ID=gene-AB11_RS07450;Name=AB11_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07450;old_locus_tag=AB11_1189 NZ_JHDH01000103.1 Protein Homology CDS 100542 101591 . + 0 ID=cds-WP_032223177.1;Parent=gene-AB11_RS07450;Dbxref=GenBank:WP_032223177.1;Name=WP_032223177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310779.1;locus_tag=AB11_RS07450;product=DUF968 domain-containing protein;protein_id=WP_032223177.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 101604 101963 . + . ID=gene-AB11_RS07455;Name=AB11_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07455;old_locus_tag=AB11_1190 NZ_JHDH01000103.1 Protein Homology CDS 101604 101963 . + 0 ID=cds-WP_032223179.1;Parent=gene-AB11_RS07455;Dbxref=GenBank:WP_032223179.1;Name=WP_032223179.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309804.1;locus_tag=AB11_RS07455;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_032223179.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 101972 102502 . + . ID=gene-AB11_RS07460;Name=AB11_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07460;old_locus_tag=AB11_1191 NZ_JHDH01000103.1 Protein Homology CDS 101972 102502 . + 0 ID=cds-WP_032223181.1;Parent=gene-AB11_RS07460;Dbxref=GenBank:WP_032223181.1;Name=WP_032223181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309805.1;locus_tag=AB11_RS07460;product=DUF1133 family protein;protein_id=WP_032223181.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 102744 102941 . + . ID=gene-AB11_RS07465;Name=AB11_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07465;old_locus_tag=AB11_1192 NZ_JHDH01000103.1 Protein Homology CDS 102744 102941 . + 0 ID=cds-WP_032223184.1;Parent=gene-AB11_RS07465;Dbxref=GenBank:WP_032223184.1;Name=WP_032223184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AB11_RS07465;product=hypothetical protein;protein_id=WP_032223184.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 103092 104150 . + . ID=gene-AB11_RS07470;Name=AB11_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07470;old_locus_tag=AB11_1193 NZ_JHDH01000103.1 Protein Homology CDS 103092 104150 . + 0 ID=cds-WP_032223187.1;Parent=gene-AB11_RS07470;Dbxref=GenBank:WP_032223187.1;Name=WP_032223187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AB11_RS07470;product=DNA-methyltransferase;protein_id=WP_032223187.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 104191 104266 . + . ID=gene-AB11_RS07475;Name=AB11_RS07475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS07475;old_locus_tag=AB11_1194 NZ_JHDH01000103.1 tRNAscan-SE tRNA 104191 104266 . + . ID=rna-AB11_RS07475;Parent=gene-AB11_RS07475;anticodon=(pos:104224..104226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS07475;product=tRNA-Ile NZ_JHDH01000103.1 tRNAscan-SE exon 104191 104266 . + . ID=exon-AB11_RS07475-1;Parent=rna-AB11_RS07475;anticodon=(pos:104224..104226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS07475;product=tRNA-Ile NZ_JHDH01000103.1 RefSeq gene 104276 104352 . + . ID=gene-AB11_RS07480;Name=AB11_RS07480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS07480;old_locus_tag=AB11_1195 NZ_JHDH01000103.1 tRNAscan-SE tRNA 104276 104352 . + . ID=rna-AB11_RS07480;Parent=gene-AB11_RS07480;anticodon=(pos:104310..104312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS07480;product=tRNA-Arg NZ_JHDH01000103.1 tRNAscan-SE exon 104276 104352 . + . ID=exon-AB11_RS07480-1;Parent=rna-AB11_RS07480;anticodon=(pos:104310..104312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS07480;product=tRNA-Arg NZ_JHDH01000103.1 RefSeq gene 104631 105059 . + . ID=gene-AB11_RS07485;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AB11_RS07485 NZ_JHDH01000103.1 Protein Homology CDS 104631 105059 . + 0 ID=cds-WP_000271627.1;Parent=gene-AB11_RS07485;Dbxref=GenBank:WP_000271627.1;Name=WP_000271627.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271626.1;locus_tag=AB11_RS07485;product=cell envelope integrity protein TolA;protein_id=WP_000271627.1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 105527 105691 . + . ID=gene-AB11_RS07490;Name=AB11_RS07490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07490;partial=true;pseudo=true;start_range=.,105527 NZ_JHDH01000103.1 Protein Homology CDS 105527 105691 . + 0 ID=cds-AB11_RS07490;Parent=gene-AB11_RS07490;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000483513.1;locus_tag=AB11_RS07490;partial=true;product=DNA methyltransferase;pseudo=true;start_range=.,105527;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 105755 106480 . + . ID=gene-AB11_RS07495;Name=AB11_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07495;old_locus_tag=AB11_1197 NZ_JHDH01000103.1 Protein Homology CDS 105755 106480 . + 0 ID=cds-WP_000382066.1;Parent=gene-AB11_RS07495;Dbxref=GenBank:WP_000382066.1;Name=WP_000382066.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000382065.1;locus_tag=AB11_RS07495;product=helix-turn-helix domain-containing protein;protein_id=WP_000382066.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 108076 110040 . + . ID=gene-AB11_RS07500;Name=AB11_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07500;old_locus_tag=AB11_1198 NZ_JHDH01000103.1 Protein Homology CDS 108076 110040 . + 0 ID=cds-WP_032223194.1;Parent=gene-AB11_RS07500;Dbxref=GenBank:WP_032223194.1;Name=WP_032223194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310999.1;locus_tag=AB11_RS07500;product=SASA family carbohydrate esterase;protein_id=WP_032223194.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 110410 110625 . + . ID=gene-AB11_RS07505;Name=AB11_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07505;old_locus_tag=AB11_1199 NZ_JHDH01000103.1 Protein Homology CDS 110410 110625 . + 0 ID=cds-WP_000284510.1;Parent=gene-AB11_RS07505;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AB11_RS07505;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 110630 111163 . + . ID=gene-AB11_RS07510;Name=AB11_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07510;old_locus_tag=AB11_1200 NZ_JHDH01000103.1 Protein Homology CDS 110630 111163 . + 0 ID=cds-WP_000087715.1;Parent=gene-AB11_RS07510;Dbxref=GenBank:WP_000087715.1;Name=WP_000087715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309240.1;locus_tag=AB11_RS07510;product=lysozyme;protein_id=WP_000087715.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 111160 111597 . + . ID=gene-AB11_RS07515;Name=AB11_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07515;old_locus_tag=AB11_1201 NZ_JHDH01000103.1 Protein Homology CDS 111160 111597 . + 0 ID=cds-WP_001499026.1;Parent=gene-AB11_RS07515;Dbxref=GenBank:WP_001499026.1;Name=WP_001499026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=AB11_RS07515;product=lysis protein;protein_id=WP_001499026.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 112014 112634 . + . ID=gene-AB11_RS07520;Name=AB11_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07520 NZ_JHDH01000103.1 Protein Homology CDS 112014 112634 . + 0 ID=cds-WP_000654793.1;Parent=gene-AB11_RS07520;Dbxref=GenBank:WP_000654793.1;Name=WP_000654793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654791.1;locus_tag=AB11_RS07520;product=sce7726 family protein;protein_id=WP_000654793.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 112576 113643 . - . ID=gene-AB11_RS07525;Name=AB11_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07525;old_locus_tag=AB11_1202 NZ_JHDH01000103.1 Protein Homology CDS 112576 113643 . - 0 ID=cds-WP_062881308.1;Parent=gene-AB11_RS07525;Dbxref=GenBank:WP_062881308.1;Name=WP_062881308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383880.1;locus_tag=AB11_RS07525;product=beta family protein;protein_id=WP_062881308.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 114048 114596 . + . ID=gene-AB11_RS07530;Name=AB11_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07530;old_locus_tag=AB11_1203 NZ_JHDH01000103.1 Protein Homology CDS 114048 114596 . + 0 ID=cds-WP_032185434.1;Parent=gene-AB11_RS07530;Dbxref=GenBank:WP_032185434.1;Name=WP_032185434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102155.1;locus_tag=AB11_RS07530;product=terminase small subunit;protein_id=WP_032185434.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 114568 116496 . + . ID=gene-AB11_RS07535;Name=AB11_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07535;old_locus_tag=AB11_1204 NZ_JHDH01000103.1 Protein Homology CDS 114568 116496 . + 0 ID=cds-WP_032223197.1;Parent=gene-AB11_RS07535;Dbxref=GenBank:WP_032223197.1;Name=WP_032223197.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310762.1;locus_tag=AB11_RS07535;product=phage terminase large subunit family protein;protein_id=WP_032223197.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 116480 116686 . + . ID=gene-AB11_RS07540;Name=AB11_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07540;old_locus_tag=AB11_1205 NZ_JHDH01000103.1 Protein Homology CDS 116480 116686 . + 0 ID=cds-WP_000259002.1;Parent=gene-AB11_RS07540;Dbxref=GenBank:WP_000259002.1;Name=WP_000259002.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310761.1;locus_tag=AB11_RS07540;product=phage head-tail joining protein;protein_id=WP_000259002.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 116683 118275 . + . ID=gene-AB11_RS07545;Name=AB11_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07545;old_locus_tag=AB11_1206 NZ_JHDH01000103.1 Protein Homology CDS 116683 118275 . + 0 ID=cds-WP_032185438.1;Parent=gene-AB11_RS07545;Dbxref=GenBank:WP_032185438.1;Name=WP_032185438.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309134.1;locus_tag=AB11_RS07545;product=phage portal protein;protein_id=WP_032185438.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 118265 119770 . + . ID=gene-AB11_RS07550;Name=AB11_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07550;old_locus_tag=AB11_1207 NZ_JHDH01000103.1 Protein Homology CDS 118265 119770 . + 0 ID=cds-WP_032185439.1;Parent=gene-AB11_RS07550;Dbxref=GenBank:WP_032185439.1;Name=WP_032185439.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309135.1;locus_tag=AB11_RS07550;product=S49 family peptidase;protein_id=WP_032185439.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 119807 120154 . + . ID=gene-AB11_RS07555;Name=AB11_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07555;old_locus_tag=AB11_1208 NZ_JHDH01000103.1 Protein Homology CDS 119807 120154 . + 0 ID=cds-WP_032185441.1;Parent=gene-AB11_RS07555;Dbxref=GenBank:WP_032185441.1;Name=WP_032185441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309136.1;locus_tag=AB11_RS07555;product=head decoration protein;protein_id=WP_032185441.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 120212 121240 . + . ID=gene-AB11_RS07560;Name=AB11_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07560;old_locus_tag=AB11_1209 NZ_JHDH01000103.1 Protein Homology CDS 120212 121240 . + 0 ID=cds-WP_032185443.1;Parent=gene-AB11_RS07560;Dbxref=GenBank:WP_032185443.1;Name=WP_032185443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706633.1;locus_tag=AB11_RS07560;product=major capsid protein;protein_id=WP_032185443.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 121293 121661 . + . ID=gene-AB11_RS07565;Name=gpFI;gbkey=Gene;gene=gpFI;gene_biotype=protein_coding;locus_tag=AB11_RS07565;old_locus_tag=AB11_1210 NZ_JHDH01000103.1 Protein Homology CDS 121293 121661 . + 0 ID=cds-WP_032185446.1;Parent=gene-AB11_RS07565;Dbxref=GenBank:WP_032185446.1;Name=WP_032185446.1;gbkey=CDS;gene=gpFI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201507.1;locus_tag=AB11_RS07565;product=DNA-packaging protein FI;protein_id=WP_032185446.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 121654 122007 . + . ID=gene-AB11_RS07570;Name=AB11_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07570;old_locus_tag=AB11_1211 NZ_JHDH01000103.1 Protein Homology CDS 121654 122007 . + 0 ID=cds-WP_001204567.1;Parent=gene-AB11_RS07570;Dbxref=GenBank:WP_001204567.1;Name=WP_001204567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204533.1;locus_tag=AB11_RS07570;product=head-tail joining protein;protein_id=WP_001204567.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 122023 122556 . + . ID=gene-AB11_RS07575;Name=AB11_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07575;old_locus_tag=AB11_1212 NZ_JHDH01000103.1 Protein Homology CDS 122023 122556 . + 0 ID=cds-WP_000975018.1;Parent=gene-AB11_RS07575;Dbxref=GenBank:WP_000975018.1;Name=WP_000975018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310198.1;locus_tag=AB11_RS07575;product=phage tail protein;protein_id=WP_000975018.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 122553 122948 . + . ID=gene-AB11_RS07580;Name=AB11_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07580;old_locus_tag=AB11_1213 NZ_JHDH01000103.1 Protein Homology CDS 122553 122948 . + 0 ID=cds-WP_000683079.1;Parent=gene-AB11_RS07580;Dbxref=GenBank:WP_000683079.1;Name=WP_000683079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310197.1;locus_tag=AB11_RS07580;product=phage minor tail U family protein;protein_id=WP_000683079.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 122956 123705 . + . ID=gene-AB11_RS07585;Name=AB11_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07585;old_locus_tag=AB11_1214 NZ_JHDH01000103.1 Protein Homology CDS 122956 123705 . + 0 ID=cds-WP_032185448.1;Parent=gene-AB11_RS07585;Dbxref=GenBank:WP_032185448.1;Name=WP_032185448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310196.1;locus_tag=AB11_RS07585;product=phage tail protein;protein_id=WP_032185448.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 123725 124156 . + . ID=gene-AB11_RS07590;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AB11_RS07590;old_locus_tag=AB11_1215 NZ_JHDH01000103.1 Protein Homology CDS 123725 124156 . + 0 ID=cds-WP_032185450.1;Parent=gene-AB11_RS07590;Dbxref=GenBank:WP_032185450.1;Name=WP_032185450.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310755.1;locus_tag=AB11_RS07590;product=phage tail assembly chaperone G;protein_id=WP_032185450.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 124183 124596 . + . ID=gene-AB11_RS07595;Name=AB11_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07595;old_locus_tag=AB11_1216 NZ_JHDH01000103.1 Protein Homology CDS 124183 124596 . + 0 ID=cds-WP_050436708.1;Parent=gene-AB11_RS07595;Dbxref=GenBank:WP_050436708.1;Name=WP_050436708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309140.2;locus_tag=AB11_RS07595;product=phage tail assembly protein T;protein_id=WP_050436708.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 124577 127177 . + . ID=gene-AB11_RS07600;Name=AB11_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07600;old_locus_tag=AB11_1217 NZ_JHDH01000103.1 Protein Homology CDS 124577 127177 . + 0 ID=cds-WP_032185451.1;Parent=gene-AB11_RS07600;Dbxref=GenBank:WP_032185451.1;Name=WP_032185451.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309141.1;locus_tag=AB11_RS07600;product=phage tail tape measure protein;protein_id=WP_032185451.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 127174 127503 . + . ID=gene-AB11_RS07605;Name=AB11_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07605;old_locus_tag=AB11_1218 NZ_JHDH01000103.1 Protein Homology CDS 127174 127503 . + 0 ID=cds-WP_000847279.1;Parent=gene-AB11_RS07605;Dbxref=GenBank:WP_000847279.1;Name=WP_000847279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310192.1;locus_tag=AB11_RS07605;product=phage tail protein;protein_id=WP_000847279.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 127503 128201 . + . ID=gene-AB11_RS07610;Name=AB11_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07610;old_locus_tag=AB11_1219 NZ_JHDH01000103.1 Protein Homology CDS 127503 128201 . + 0 ID=cds-WP_032223201.1;Parent=gene-AB11_RS07610;Dbxref=GenBank:WP_032223201.1;Name=WP_032223201.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310191.1;locus_tag=AB11_RS07610;product=phage minor tail protein L;protein_id=WP_032223201.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 128212 128955 . + . ID=gene-AB11_RS07615;Name=AB11_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07615;old_locus_tag=AB11_1220 NZ_JHDH01000103.1 Protein Homology CDS 128212 128955 . + 0 ID=cds-WP_000194715.1;Parent=gene-AB11_RS07615;Dbxref=GenBank:WP_000194715.1;Name=WP_000194715.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310013.1;locus_tag=AB11_RS07615;product=C40 family peptidase;protein_id=WP_000194715.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 128952 129533 . + . ID=gene-AB11_RS07620;Name=AB11_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07620;old_locus_tag=AB11_1221 NZ_JHDH01000103.1 Protein Homology CDS 128952 129533 . + 0 ID=cds-WP_001089952.1;Parent=gene-AB11_RS07620;Dbxref=GenBank:WP_001089952.1;Name=WP_001089952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310189.2;locus_tag=AB11_RS07620;product=tail assembly protein;protein_id=WP_001089952.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 129958 133425 . + . ID=gene-AB11_RS07625;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AB11_RS07625;old_locus_tag=AB11_1223 NZ_JHDH01000103.1 Protein Homology CDS 129958 133425 . + 0 ID=cds-WP_032223204.1;Parent=gene-AB11_RS07625;Dbxref=GenBank:WP_032223204.1;Name=WP_032223204.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514889.1;locus_tag=AB11_RS07625;product=phage attachment tail tip protein J;protein_id=WP_032223204.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 133624 133764 . + . ID=gene-AB11_RS07630;Name=AB11_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07630;old_locus_tag=AB11_1224 NZ_JHDH01000103.1 Protein Homology CDS 133624 133764 . + 0 ID=cds-WP_000078852.1;Parent=gene-AB11_RS07630;Dbxref=GenBank:WP_000078852.1;Name=WP_000078852.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078918.1;locus_tag=AB11_RS07630;product=Hok/Gef family protein;protein_id=WP_000078852.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 133928 135307 . + . ID=gene-AB11_RS07635;Name=AB11_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07635;old_locus_tag=AB11_1225 NZ_JHDH01000103.1 Protein Homology CDS 133928 135307 . + 0 ID=cds-WP_032190430.1;Parent=gene-AB11_RS07635;Dbxref=GenBank:WP_032190430.1;Name=WP_032190430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001379928.1;locus_tag=AB11_RS07635;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_032190430.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 135317 135541 . + . ID=gene-AB11_RS07640;Name=AB11_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07640;old_locus_tag=AB11_1226 NZ_JHDH01000103.1 Protein Homology CDS 135317 135541 . + 0 ID=cds-WP_001367204.1;Parent=gene-AB11_RS07640;Dbxref=GenBank:WP_001367204.1;Name=WP_001367204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001367204.1;locus_tag=AB11_RS07640;product=hypothetical protein;protein_id=WP_001367204.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 135538 136212 . + . ID=gene-AB11_RS07645;Name=AB11_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07645;old_locus_tag=AB11_1227 NZ_JHDH01000103.1 Protein Homology CDS 135538 136212 . + 0 ID=cds-WP_032185456.1;Parent=gene-AB11_RS07645;Dbxref=GenBank:WP_032185456.1;Name=WP_032185456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972077.1;locus_tag=AB11_RS07645;product=DUF4376 domain-containing protein;protein_id=WP_032185456.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 136376 136705 . - . ID=gene-AB11_RS07650;Name=AB11_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07650 NZ_JHDH01000103.1 Protein Homology CDS 136376 136705 . - 0 ID=cds-WP_001367470.1;Parent=gene-AB11_RS07650;Dbxref=GenBank:WP_001367470.1;Name=WP_001367470.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376212.1;locus_tag=AB11_RS07650;product=YkgJ family cysteine cluster protein;protein_id=WP_001367470.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 136870 137733 . - . ID=gene-AB11_RS07655;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AB11_RS07655;old_locus_tag=AB11_1228 NZ_JHDH01000103.1 Protein Homology CDS 136870 137733 . - 0 ID=cds-WP_000799399.1;Parent=gene-AB11_RS07655;Dbxref=GenBank:WP_000799399.1;Name=WP_000799399.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309597.3;locus_tag=AB11_RS07655;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799399.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 137717 138853 . - . ID=gene-AB11_RS07660;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AB11_RS07660;old_locus_tag=AB11_1229 NZ_JHDH01000103.1 Protein Homology CDS 137717 138853 . - 0 ID=cds-WP_000531594.1;Parent=gene-AB11_RS07660;Dbxref=GenBank:WP_000531594.1;Name=WP_000531594.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AB11_RS07660;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531594.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 139103 140329 . + . ID=gene-AB11_RS07665;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AB11_RS07665;old_locus_tag=AB11_1230 NZ_JHDH01000103.1 Protein Homology CDS 139103 140329 . + 0 ID=cds-WP_000359434.1;Parent=gene-AB11_RS07665;Dbxref=GenBank:WP_000359434.1;Name=WP_000359434.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415645.1;locus_tag=AB11_RS07665;product=peptidase T;protein_id=WP_000359434.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 140378 141499 . - . ID=gene-AB11_RS07670;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AB11_RS07670;old_locus_tag=AB11_1231 NZ_JHDH01000103.1 Protein Homology CDS 140378 141499 . - 0 ID=cds-WP_000456506.1;Parent=gene-AB11_RS07670;Dbxref=GenBank:WP_000456506.1;Name=WP_000456506.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415646.4;locus_tag=AB11_RS07670;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456506.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 141575 143035 . - . ID=gene-AB11_RS07675;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AB11_RS07675;old_locus_tag=AB11_1232 NZ_JHDH01000103.1 Protein Homology CDS 141575 143035 . - 0 ID=cds-WP_000735412.1;Parent=gene-AB11_RS07675;Dbxref=GenBank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AB11_RS07675;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 143035 143706 . - . ID=gene-AB11_RS07680;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AB11_RS07680;old_locus_tag=AB11_1233 NZ_JHDH01000103.1 Protein Homology CDS 143035 143706 . - 0 ID=cds-WP_001265471.1;Parent=gene-AB11_RS07680;Dbxref=GenBank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AB11_RS07680;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 143875 145245 . - . ID=gene-AB11_RS07685;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AB11_RS07685;old_locus_tag=AB11_1234 NZ_JHDH01000103.1 Protein Homology CDS 143875 145245 . - 0 ID=cds-WP_000423742.1;Parent=gene-AB11_RS07685;Dbxref=GenBank:WP_000423742.1;Name=WP_000423742.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AB11_RS07685;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 145249 145890 . - . ID=gene-AB11_RS07690;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AB11_RS07690;old_locus_tag=AB11_1235 NZ_JHDH01000103.1 Protein Homology CDS 145249 145890 . - 0 ID=cds-WP_001297479.1;Parent=gene-AB11_RS07690;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AB11_RS07690;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 145926 147032 . - . ID=gene-AB11_RS07695;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AB11_RS07695;old_locus_tag=AB11_1236 NZ_JHDH01000103.1 Protein Homology CDS 145926 147032 . - 0 ID=cds-WP_001297484.1;Parent=gene-AB11_RS07695;Dbxref=GenBank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AB11_RS07695;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 147086 147547 . - . ID=gene-AB11_RS07700;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AB11_RS07700;old_locus_tag=AB11_1237 NZ_JHDH01000103.1 Protein Homology CDS 147086 147547 . - 0 ID=cds-WP_000476093.1;Parent=gene-AB11_RS07700;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AB11_RS07700;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 147557 148210 . - . ID=gene-AB11_RS07705;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AB11_RS07705;old_locus_tag=AB11_1238 NZ_JHDH01000103.1 Protein Homology CDS 147557 148210 . - 0 ID=cds-WP_001248691.1;Parent=gene-AB11_RS07705;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AB11_RS07705;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 148382 149632 . + . ID=gene-AB11_RS07710;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AB11_RS07710;old_locus_tag=AB11_1239 NZ_JHDH01000103.1 Protein Homology CDS 148382 149632 . + 0 ID=cds-WP_032223208.1;Parent=gene-AB11_RS07710;Dbxref=GenBank:WP_032223208.1;Name=WP_032223208.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AB11_RS07710;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_032223208.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 149735 150058 . - . ID=gene-AB11_RS07715;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AB11_RS07715 NZ_JHDH01000103.1 Protein Homology CDS 149735 150058 . - 0 ID=cds-WP_001295666.1;Parent=gene-AB11_RS07715;Dbxref=GenBank:WP_001295666.1;Name=WP_001295666.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AB11_RS07715;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 150314 150358 . - . ID=gene-AB11_RS25200;Name=AB11_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25200 NZ_JHDH01000103.1 Protein Homology CDS 150314 150358 . - 0 ID=cds-WP_120795380.1;Parent=gene-AB11_RS25200;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AB11_RS25200;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 150594 150704 . - . ID=gene-AB11_RS07720;Name=ymgL;gbkey=Gene;gene=ymgL;gene_biotype=protein_coding;locus_tag=AB11_RS07720 NZ_JHDH01000103.1 Protein Homology CDS 150594 150704 . - 0 ID=cds-WP_032082692.1;Parent=gene-AB11_RS07720;Dbxref=GenBank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;gene=ymgL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AB11_RS07720;product=protein YmgL;protein_id=WP_032082692.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 150757 151161 . - . ID=gene-AB11_RS07725;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AB11_RS07725;old_locus_tag=AB11_1240 NZ_JHDH01000103.1 Protein Homology CDS 150757 151161 . - 0 ID=cds-WP_000373101.1;Parent=gene-AB11_RS07725;Dbxref=GenBank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AB11_RS07725;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 151382 152113 . - . ID=gene-AB11_RS07730;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AB11_RS07730;old_locus_tag=AB11_1241 NZ_JHDH01000103.1 Protein Homology CDS 151382 152113 . - 0 ID=cds-WP_000332303.1;Parent=gene-AB11_RS07730;Dbxref=GenBank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AB11_RS07730;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 152318 153528 . - . ID=gene-AB11_RS07735;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=pseudogene;locus_tag=AB11_RS07735;pseudo=true NZ_JHDH01000103.1 Protein Homology CDS 152318 153528 . - 0 ID=cds-AB11_RS07735;Parent=gene-AB11_RS07735;Note=frameshifted;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AB11_RS07735;product=blue light-responsive regulator BluF;pseudo=true;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 153842 154078 . + . ID=gene-AB11_RS07740;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AB11_RS07740 NZ_JHDH01000103.1 Protein Homology CDS 153842 154078 . + 0 ID=cds-WP_000554140.1;Parent=gene-AB11_RS07740;Dbxref=GenBank:WP_000554140.1;Name=WP_000554140.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AB11_RS07740;product=regulatory protein YcgZ;protein_id=WP_000554140.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 154121 154393 . + . ID=gene-AB11_RS07745;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AB11_RS07745 NZ_JHDH01000103.1 Protein Homology CDS 154121 154393 . + 0 ID=cds-WP_000858002.1;Parent=gene-AB11_RS07745;Dbxref=GenBank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AB11_RS07745;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 154422 154688 . + . ID=gene-AB11_RS07750;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AB11_RS07750 NZ_JHDH01000103.1 Protein Homology CDS 154422 154688 . + 0 ID=cds-WP_000888772.1;Parent=gene-AB11_RS07750;Dbxref=GenBank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AB11_RS07750;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JHDH01000103.1 RefSeq gene 154801 155049 . + . ID=gene-AB11_RS07755;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AB11_RS07755;old_locus_tag=AB11_1244 NZ_JHDH01000103.1 Protein Homology CDS 154801 155049 . + 0 ID=cds-WP_001065752.1;Parent=gene-AB11_RS07755;Dbxref=GenBank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AB11_RS07755;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 155381 155728 . + . ID=gene-AB11_RS07760;Name=AB11_RS07760;end_range=155728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07760;partial=true;pseudo=true NZ_JHDH01000103.1 Protein Homology CDS 155381 155728 . + 0 ID=cds-AB11_RS07760;Parent=gene-AB11_RS07760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=155728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AB11_RS07760;partial=true;product=CSS-motif domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000103.1 RefSeq pseudogene 155700 156203 . - . ID=gene-AB11_RS07765;Name=AB11_RS07765;end_range=156203,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07765;old_locus_tag=AB11_1246;partial=true;pseudo=true NZ_JHDH01000103.1 Protein Homology CDS 155700 156203 . - 0 ID=cds-AB11_RS07765;Parent=gene-AB11_RS07765;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=156203,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS07765;partial=true;product=IS3-like element IS2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000104.1 1 52428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000104.1 RefSeq region 1 52428 . + . ID=NZ_JHDH01000104.1:1..52428;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000104.1 RefSeq gene 1 322 . - . ID=gene-AB11_RS07770;Name=AB11_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07770;old_locus_tag=AB11_1247;partial=true;start_range=.,1 NZ_JHDH01000104.1 Protein Homology CDS 1 322 . - 0 ID=cds-WP_000567748.1;Parent=gene-AB11_RS07770;Dbxref=GenBank:WP_000567748.1;Name=WP_000567748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS07770;partial=true;product=IS3 family transposase;protein_id=WP_000567748.1;start_range=.,1;transl_table=11 NZ_JHDH01000104.1 RefSeq pseudogene 405 1634 . + . ID=gene-AB11_RS07775;Name=AB11_RS07775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07775;partial=true;pseudo=true;start_range=.,405 NZ_JHDH01000104.1 Protein Homology CDS 405 1634 . + 0 ID=cds-AB11_RS07775;Parent=gene-AB11_RS07775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AB11_RS07775;partial=true;product=cyclic diguanylate phosphodiesterase;pseudo=true;start_range=.,405;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 1766 1984 . + . ID=gene-AB11_RS07780;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AB11_RS07780 NZ_JHDH01000104.1 Protein Homology CDS 1766 1984 . + 0 ID=cds-WP_001065861.1;Parent=gene-AB11_RS07780;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AB11_RS07780;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JHDH01000104.1 RefSeq pseudogene 2384 5031 . + . ID=gene-AB11_RS07785;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AB11_RS07785;pseudo=true NZ_JHDH01000104.1 Protein Homology CDS 2384 5031 . + 0 ID=cds-AB11_RS07785;Parent=gene-AB11_RS07785;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AB11_RS07785;product=autotransporter YcgH;pseudo=true;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 5088 5423 . - . ID=gene-AB11_RS07790;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AB11_RS07790;old_locus_tag=AB11_1253 NZ_JHDH01000104.1 Protein Homology CDS 5088 5423 . - 0 ID=cds-WP_000979977.1;Parent=gene-AB11_RS07790;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AB11_RS07790;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 5427 5771 . - . ID=gene-AB11_RS07795;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AB11_RS07795;old_locus_tag=AB11_1254 NZ_JHDH01000104.1 Protein Homology CDS 5427 5771 . - 0 ID=cds-WP_000726974.1;Parent=gene-AB11_RS07795;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AB11_RS07795;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 5773 5946 . - . ID=gene-AB11_RS07800;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AB11_RS07800 NZ_JHDH01000104.1 Protein Homology CDS 5773 5946 . - 0 ID=cds-WP_000122462.1;Parent=gene-AB11_RS07800;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AB11_RS07800;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 6047 6232 . + . ID=gene-AB11_RS07805;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AB11_RS07805 NZ_JHDH01000104.1 Protein Homology CDS 6047 6232 . + 0 ID=cds-WP_001325005.1;Parent=gene-AB11_RS07805;Dbxref=GenBank:WP_001325005.1;Name=WP_001325005.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AB11_RS07805;product=protein YmgJ;protein_id=WP_001325005.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 6193 6312 . + . ID=gene-AB11_RS07810;Name=AB11_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07810;old_locus_tag=AB11_1255 NZ_JHDH01000104.1 Protein Homology CDS 6193 6312 . + 0 ID=cds-WP_001131446.1;Parent=gene-AB11_RS07810;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AB11_RS07810;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JHDH01000104.1 RefSeq pseudogene 6347 6690 . + . ID=gene-AB11_RS07815;Name=AB11_RS07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS07815;partial=true;pseudo=true;start_range=.,6347 NZ_JHDH01000104.1 Protein Homology CDS 6347 6690 . + 0 ID=cds-AB11_RS07815;Parent=gene-AB11_RS07815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AB11_RS07815;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,6347;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 7062 7328 . - . ID=gene-AB11_RS07820;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AB11_RS07820;old_locus_tag=AB11_1257 NZ_JHDH01000104.1 Protein Homology CDS 7062 7328 . - 0 ID=cds-WP_001185665.1;Parent=gene-AB11_RS07820;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AB11_RS07820;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 7332 8144 . - . ID=gene-AB11_RS07825;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AB11_RS07825;old_locus_tag=AB11_1258 NZ_JHDH01000104.1 Protein Homology CDS 7332 8144 . - 0 ID=cds-WP_000101055.1;Parent=gene-AB11_RS07825;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AB11_RS07825;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 8168 8863 . - . ID=gene-AB11_RS07830;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AB11_RS07830;old_locus_tag=AB11_1259 NZ_JHDH01000104.1 Protein Homology CDS 8168 8863 . - 0 ID=cds-WP_001301105.1;Parent=gene-AB11_RS07830;Dbxref=GenBank:WP_001301105.1;Name=WP_001301105.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415694.1;locus_tag=AB11_RS07830;product=septum site-determining protein MinC;protein_id=WP_001301105.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 9383 9751 . + . ID=gene-AB11_RS07835;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AB11_RS07835;old_locus_tag=AB11_1260 NZ_JHDH01000104.1 Protein Homology CDS 9383 9751 . + 0 ID=cds-WP_032223226.1;Parent=gene-AB11_RS07835;Dbxref=GenBank:WP_032223226.1;Name=WP_032223226.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AB11_RS07835;product=YcgJ family protein;protein_id=WP_032223226.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 9854 10255 . - . ID=gene-AB11_RS07840;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AB11_RS07840;old_locus_tag=AB11_1261 NZ_JHDH01000104.1 Protein Homology CDS 9854 10255 . - 0 ID=cds-WP_000695215.1;Parent=gene-AB11_RS07840;Dbxref=GenBank:WP_000695215.1;Name=WP_000695215.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415696.1;locus_tag=AB11_RS07840;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695215.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 10497 10790 . + . ID=gene-AB11_RS07845;Name=AB11_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS07845;old_locus_tag=AB11_1263 NZ_JHDH01000104.1 Protein Homology CDS 10497 10790 . + 0 ID=cds-WP_001295992.1;Parent=gene-AB11_RS07845;Dbxref=GenBank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AB11_RS07845;product=YcgL domain-containing protein;protein_id=WP_001295992.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 10862 11521 . + . ID=gene-AB11_RS07850;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AB11_RS07850;old_locus_tag=AB11_1264 NZ_JHDH01000104.1 Protein Homology CDS 10862 11521 . + 0 ID=cds-WP_000284277.1;Parent=gene-AB11_RS07850;Dbxref=GenBank:WP_000284277.1;Name=WP_000284277.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AB11_RS07850;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284277.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 11613 12059 . + . ID=gene-AB11_RS07855;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AB11_RS07855;old_locus_tag=AB11_1265 NZ_JHDH01000104.1 Protein Homology CDS 11613 12059 . + 0 ID=cds-WP_001306825.1;Parent=gene-AB11_RS07855;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AB11_RS07855;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JHDH01000104.1 RefSeq pseudogene 12266 13167 . - . ID=gene-AB11_RS07860;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=pseudogene;locus_tag=AB11_RS07860;pseudo=true NZ_JHDH01000104.1 Protein Homology CDS 12266 13167 . - 0 ID=cds-AB11_RS07860;Parent=gene-AB11_RS07860;Note=frameshifted;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AB11_RS07860;product=hemolysin HlyE;pseudo=true;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 13540 13959 . + . ID=gene-AB11_RS07865;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AB11_RS07865;old_locus_tag=AB11_1268 NZ_JHDH01000104.1 Protein Homology CDS 13540 13959 . + 0 ID=cds-WP_000897378.1;Parent=gene-AB11_RS07865;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AB11_RS07865;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 13959 15227 . + . ID=gene-AB11_RS07870;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AB11_RS07870;old_locus_tag=AB11_1269 NZ_JHDH01000104.1 Protein Homology CDS 13959 15227 . + 0 ID=cds-WP_000457616.1;Parent=gene-AB11_RS07870;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AB11_RS07870;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 15273 15803 . - . ID=gene-AB11_RS07875;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AB11_RS07875;old_locus_tag=AB11_1270 NZ_JHDH01000104.1 Protein Homology CDS 15273 15803 . - 0 ID=cds-WP_000943459.1;Parent=gene-AB11_RS07875;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AB11_RS07875;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 15949 17490 . - . ID=gene-AB11_RS07880;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AB11_RS07880;old_locus_tag=AB11_1271 NZ_JHDH01000104.1 Protein Homology CDS 15949 17490 . - 0 ID=cds-WP_000406391.1;Parent=gene-AB11_RS07880;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AB11_RS07880;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 17711 18430 . + . ID=gene-AB11_RS07885;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AB11_RS07885;old_locus_tag=AB11_1272 NZ_JHDH01000104.1 Protein Homology CDS 17711 18430 . + 0 ID=cds-WP_000234823.1;Parent=gene-AB11_RS07885;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AB11_RS07885;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 18482 20014 . - . ID=gene-AB11_RS07890;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AB11_RS07890;old_locus_tag=AB11_1273 NZ_JHDH01000104.1 Protein Homology CDS 18482 20014 . - 0 ID=cds-WP_000190854.1;Parent=gene-AB11_RS07890;Dbxref=GenBank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AB11_RS07890;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 20344 21642 . + . ID=gene-AB11_RS07895;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AB11_RS07895;old_locus_tag=AB11_1274 NZ_JHDH01000104.1 Protein Homology CDS 20344 21642 . + 0 ID=cds-WP_001266908.1;Parent=gene-AB11_RS07895;Dbxref=GenBank:WP_001266908.1;Name=WP_001266908.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AB11_RS07895;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 21652 22722 . + . ID=gene-AB11_RS07900;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AB11_RS07900;old_locus_tag=AB11_1275 NZ_JHDH01000104.1 Protein Homology CDS 21652 22722 . + 0 ID=cds-WP_000197881.1;Parent=gene-AB11_RS07900;Dbxref=GenBank:WP_000197881.1;Name=WP_000197881.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AB11_RS07900;product=catabolic alanine racemase DadX;protein_id=WP_000197881.1;transl_table=11 NZ_JHDH01000104.1 RefSeq pseudogene 23033 23173 . + . ID=gene-AB11_RS26230;Name=AB11_RS26230;end_range=23173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26230;partial=true;pseudo=true NZ_JHDH01000104.1 Protein Homology CDS 23033 23173 . + 0 ID=cds-AB11_RS26230;Parent=gene-AB11_RS26230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23173,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AB11_RS26230;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 23108 24844 . - . ID=gene-AB11_RS07905;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AB11_RS07905;old_locus_tag=AB11_1277 NZ_JHDH01000104.1 Protein Homology CDS 23108 24844 . - 0 ID=cds-WP_000340194.1;Parent=gene-AB11_RS07905;Dbxref=GenBank:WP_000340194.1;Name=WP_000340194.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AB11_RS07905;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 24939 25853 . - . ID=gene-AB11_RS07910;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AB11_RS07910;old_locus_tag=AB11_1278 NZ_JHDH01000104.1 Protein Homology CDS 24939 25853 . - 0 ID=cds-WP_000051560.1;Parent=gene-AB11_RS07910;Dbxref=GenBank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AB11_RS07910;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 25953 26564 . + . ID=gene-AB11_RS07915;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AB11_RS07915;old_locus_tag=AB11_1279 NZ_JHDH01000104.1 Protein Homology CDS 25953 26564 . + 0 ID=cds-WP_001301104.1;Parent=gene-AB11_RS07915;Dbxref=GenBank:WP_001301104.1;Name=WP_001301104.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AB11_RS07915;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001301104.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 26566 27300 . - . ID=gene-AB11_RS07920;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AB11_RS07920;old_locus_tag=AB11_1280 NZ_JHDH01000104.1 Protein Homology CDS 26566 27300 . - 0 ID=cds-WP_000020169.1;Parent=gene-AB11_RS07920;Dbxref=GenBank:WP_000020169.1;Name=WP_000020169.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AB11_RS07920;product=flagellar brake protein YcgR;protein_id=WP_000020169.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 27501 27755 . + . ID=gene-AB11_RS07925;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AB11_RS07925;old_locus_tag=AB11_1281 NZ_JHDH01000104.1 Protein Homology CDS 27501 27755 . + 0 ID=cds-WP_000511313.1;Parent=gene-AB11_RS07925;Dbxref=GenBank:WP_000511313.1;Name=WP_000511313.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=AB11_RS07925;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511313.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 27933 28373 . + . ID=gene-AB11_RS07930;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AB11_RS07930;old_locus_tag=AB11_1282 NZ_JHDH01000104.1 Protein Homology CDS 27933 28373 . + 0 ID=cds-WP_000615067.1;Parent=gene-AB11_RS07930;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AB11_RS07930;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 28452 30149 . - . ID=gene-AB11_RS07935;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AB11_RS07935;old_locus_tag=AB11_1283 NZ_JHDH01000104.1 Protein Homology CDS 28452 30149 . - 0 ID=cds-WP_000841714.1;Parent=gene-AB11_RS07935;Dbxref=GenBank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AB11_RS07935;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 30469 31887 . - . ID=gene-AB11_RS07940;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AB11_RS07940 NZ_JHDH01000104.1 Protein Homology CDS 30469 31887 . - 0 ID=cds-WP_032223230.1;Parent=gene-AB11_RS07940;Dbxref=GenBank:WP_032223230.1;Name=WP_032223230.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AB11_RS07940;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_032223230.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 31898 32530 . - . ID=gene-AB11_RS07945;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AB11_RS07945;old_locus_tag=AB11_1286 NZ_JHDH01000104.1 Protein Homology CDS 31898 32530 . - 0 ID=cds-WP_000059411.1;Parent=gene-AB11_RS07945;Dbxref=GenBank:WP_000059411.1;Name=WP_000059411.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AB11_RS07945;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 32541 33611 . - . ID=gene-AB11_RS07950;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AB11_RS07950;old_locus_tag=AB11_1287 NZ_JHDH01000104.1 Protein Homology CDS 32541 33611 . - 0 ID=cds-WP_000733715.1;Parent=gene-AB11_RS07950;Dbxref=GenBank:WP_000733715.1;Name=WP_000733715.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AB11_RS07950;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 33839 35758 . + . ID=gene-AB11_RS07955;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AB11_RS07955;old_locus_tag=AB11_1288 NZ_JHDH01000104.1 Protein Homology CDS 33839 35758 . + 0 ID=cds-WP_021570762.1;Parent=gene-AB11_RS07955;Dbxref=GenBank:WP_021570762.1;Name=WP_021570762.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AB11_RS07955;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_021570762.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 35858 38725 . - . ID=gene-AB11_RS07960;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;locus_tag=AB11_RS07960;old_locus_tag=AB11_1289 NZ_JHDH01000104.1 Protein Homology CDS 35858 38725 . - 0 ID=cds-WP_001328993.1;Parent=gene-AB11_RS07960;Dbxref=GenBank:WP_001328993.1;Name=WP_001328993.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AB11_RS07960;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001328993.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 39494 40585 . - . ID=gene-AB11_RS07965;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AB11_RS07965;old_locus_tag=AB11_1291 NZ_JHDH01000104.1 Protein Homology CDS 39494 40585 . - 0 ID=cds-WP_000505866.1;Parent=gene-AB11_RS07965;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AB11_RS07965;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 40702 41286 . - . ID=gene-AB11_RS07970;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AB11_RS07970;old_locus_tag=AB11_1292 NZ_JHDH01000104.1 Protein Homology CDS 40702 41286 . - 0 ID=cds-WP_000152933.1;Parent=gene-AB11_RS07970;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AB11_RS07970;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 41564 41842 . + . ID=gene-AB11_RS07975;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AB11_RS07975;old_locus_tag=AB11_1293 NZ_JHDH01000104.1 Protein Homology CDS 41564 41842 . + 0 ID=cds-WP_000823885.1;Parent=gene-AB11_RS07975;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AB11_RS07975;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 41897 43576 . - . ID=gene-AB11_RS07980;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AB11_RS07980;old_locus_tag=AB11_1294 NZ_JHDH01000104.1 Protein Homology CDS 41897 43576 . - 0 ID=cds-WP_001033352.1;Parent=gene-AB11_RS07980;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AB11_RS07980;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 43701 44648 . - . ID=gene-AB11_RS07985;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AB11_RS07985;old_locus_tag=AB11_1295 NZ_JHDH01000104.1 Protein Homology CDS 43701 44648 . - 0 ID=cds-WP_001298109.1;Parent=gene-AB11_RS07985;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AB11_RS07985;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 44799 45650 . - . ID=gene-AB11_RS07990;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AB11_RS07990;old_locus_tag=AB11_1296 NZ_JHDH01000104.1 Protein Homology CDS 44799 45650 . - 0 ID=cds-WP_001260328.1;Parent=gene-AB11_RS07990;Dbxref=GenBank:WP_001260328.1;Name=WP_001260328.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=AB11_RS07990;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260328.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 45650 46273 . - . ID=gene-AB11_RS07995;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AB11_RS07995;old_locus_tag=AB11_1297 NZ_JHDH01000104.1 Protein Homology CDS 45650 46273 . - 0 ID=cds-WP_001130692.1;Parent=gene-AB11_RS07995;Dbxref=GenBank:WP_001130692.1;Name=WP_001130692.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AB11_RS07995;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130692.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 46487 47743 . + . ID=gene-AB11_RS08000;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AB11_RS08000;old_locus_tag=AB11_1298 NZ_JHDH01000104.1 Protein Homology CDS 46487 47743 . + 0 ID=cds-WP_001299679.1;Parent=gene-AB11_RS08000;Dbxref=GenBank:WP_001299679.1;Name=WP_001299679.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AB11_RS08000;product=glutamyl-tRNA reductase;protein_id=WP_001299679.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 47785 48867 . + . ID=gene-AB11_RS08005;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AB11_RS08005;old_locus_tag=AB11_1299 NZ_JHDH01000104.1 Protein Homology CDS 47785 48867 . + 0 ID=cds-WP_000804726.1;Parent=gene-AB11_RS08005;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AB11_RS08005;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 48867 49700 . + . ID=gene-AB11_RS08010;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AB11_RS08010;old_locus_tag=AB11_1300 NZ_JHDH01000104.1 Protein Homology CDS 48867 49700 . + 0 ID=cds-WP_000456467.1;Parent=gene-AB11_RS08010;Dbxref=GenBank:WP_000456467.1;Name=WP_000456467.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=AB11_RS08010;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456467.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 49697 50089 . + . ID=gene-AB11_RS08015;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AB11_RS08015;old_locus_tag=AB11_1301 NZ_JHDH01000104.1 Protein Homology CDS 49697 50089 . + 0 ID=cds-WP_000200374.1;Parent=gene-AB11_RS08015;Dbxref=GenBank:WP_000200374.1;Name=WP_000200374.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AB11_RS08015;product=invasion regulator SirB2;protein_id=WP_000200374.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 50093 50902 . + . ID=gene-AB11_RS08020;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AB11_RS08020;old_locus_tag=AB11_1302 NZ_JHDH01000104.1 Protein Homology CDS 50093 50902 . + 0 ID=cds-WP_001645203.1;Parent=gene-AB11_RS08020;Dbxref=GenBank:WP_001645203.1;Name=WP_001645203.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AB11_RS08020;product=invasion regulator SirB1;protein_id=WP_001645203.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 50938 51792 . + . ID=gene-AB11_RS08025;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AB11_RS08025;old_locus_tag=AB11_1303 NZ_JHDH01000104.1 Protein Homology CDS 50938 51792 . + 0 ID=cds-WP_000811065.1;Parent=gene-AB11_RS08025;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AB11_RS08025;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JHDH01000104.1 RefSeq gene 51941 52048 . - . ID=gene-AB11_RS08030;Name=ldrA;gbkey=Gene;gene=ldrA;gene_biotype=protein_coding;locus_tag=AB11_RS08030;old_locus_tag=AB11_1304 NZ_JHDH01000104.1 Protein Homology CDS 51941 52048 . - 0 ID=cds-WP_000170955.1-2;Parent=gene-AB11_RS08030;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;gene=ldrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AB11_RS08030;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 ##sequence-region NZ_JHDH01000105.1 1 29903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000105.1 RefSeq region 1 29903 . + . ID=NZ_JHDH01000105.1:1..29903;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000105.1 RefSeq gene 27 134 . - . ID=gene-AB11_RS08035;Name=ldrC;gbkey=Gene;gene=ldrC;gene_biotype=protein_coding;locus_tag=AB11_RS08035;old_locus_tag=AB11_1305 NZ_JHDH01000105.1 Protein Homology CDS 27 134 . - 0 ID=cds-WP_000170955.1-3;Parent=gene-AB11_RS08035;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;gene=ldrC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AB11_RS08035;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 538 1638 . - . ID=gene-AB11_RS08040;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AB11_RS08040;old_locus_tag=AB11_1306 NZ_JHDH01000105.1 Protein Homology CDS 538 1638 . - 0 ID=cds-WP_000063607.1;Parent=gene-AB11_RS08040;Dbxref=GenBank:WP_000063607.1;Name=WP_000063607.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415734.1;locus_tag=AB11_RS08040;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000063607.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 1908 2138 . + . ID=gene-AB11_RS08045;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AB11_RS08045;old_locus_tag=AB11_1307 NZ_JHDH01000105.1 Protein Homology CDS 1908 2138 . + 0 ID=cds-WP_001146444.1;Parent=gene-AB11_RS08045;Dbxref=GenBank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AB11_RS08045;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 2296 2991 . + . ID=gene-AB11_RS08050;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AB11_RS08050;old_locus_tag=AB11_1308 NZ_JHDH01000105.1 Protein Homology CDS 2296 2991 . + 0 ID=cds-WP_001336325.1;Parent=gene-AB11_RS08050;Dbxref=GenBank:WP_001336325.1;Name=WP_001336325.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AB11_RS08050;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001336325.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 3035 3388 . - . ID=gene-AB11_RS08055;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AB11_RS08055;old_locus_tag=AB11_1309 NZ_JHDH01000105.1 Protein Homology CDS 3035 3388 . - 0 ID=cds-WP_001169669.1;Parent=gene-AB11_RS08055;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AB11_RS08055;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 3573 4967 . + . ID=gene-AB11_RS08060;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AB11_RS08060;old_locus_tag=AB11_1310 NZ_JHDH01000105.1 Protein Homology CDS 3573 4967 . + 0 ID=cds-WP_000086217.1;Parent=gene-AB11_RS08060;Dbxref=GenBank:WP_000086217.1;Name=WP_000086217.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AB11_RS08060;product=inverse autotransporter invasin YchO;protein_id=WP_000086217.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 4968 5618 . - . ID=gene-AB11_RS08065;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AB11_RS08065;old_locus_tag=AB11_1311 NZ_JHDH01000105.1 Protein Homology CDS 4968 5618 . - 0 ID=cds-WP_000070491.1;Parent=gene-AB11_RS08065;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AB11_RS08065;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 5611 7407 . - . ID=gene-AB11_RS08070;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AB11_RS08070;old_locus_tag=AB11_1312 NZ_JHDH01000105.1 Protein Homology CDS 5611 7407 . - 0 ID=cds-WP_000918073.1;Parent=gene-AB11_RS08070;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AB11_RS08070;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 7746 9137 . + . ID=gene-AB11_RS08075;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AB11_RS08075;old_locus_tag=AB11_1314 NZ_JHDH01000105.1 Protein Homology CDS 7746 9137 . + 0 ID=cds-WP_000019827.1;Parent=gene-AB11_RS08075;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AB11_RS08075;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 9653 13396 . + . ID=gene-AB11_RS08080;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AB11_RS08080;old_locus_tag=AB11_1315 NZ_JHDH01000105.1 Protein Homology CDS 9653 13396 . + 0 ID=cds-WP_032223238.1;Parent=gene-AB11_RS08080;Dbxref=GenBank:WP_032223238.1;Name=WP_032223238.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415742.1;locus_tag=AB11_RS08080;product=nitrate reductase subunit alpha;protein_id=WP_032223238.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 13393 14931 . + . ID=gene-AB11_RS08085;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB11_RS08085;old_locus_tag=AB11_1316 NZ_JHDH01000105.1 Protein Homology CDS 13393 14931 . + 0 ID=cds-WP_000702660.1;Parent=gene-AB11_RS08085;Dbxref=GenBank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AB11_RS08085;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 14928 15638 . + . ID=gene-AB11_RS08090;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AB11_RS08090;old_locus_tag=AB11_1317 NZ_JHDH01000105.1 Protein Homology CDS 14928 15638 . + 0 ID=cds-WP_000571699.1;Parent=gene-AB11_RS08090;Dbxref=GenBank:WP_000571699.1;Name=WP_000571699.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707135.1;locus_tag=AB11_RS08090;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571699.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 15638 16315 . + . ID=gene-AB11_RS08095;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB11_RS08095;old_locus_tag=AB11_1318 NZ_JHDH01000105.1 Protein Homology CDS 15638 16315 . + 0 ID=cds-WP_001160110.1;Parent=gene-AB11_RS08095;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AB11_RS08095;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 16499 16630 . - . ID=gene-AB11_RS08100;Name=AB11_RS08100;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS08100 NZ_JHDH01000105.1 cmsearch ncRNA 16499 16630 . - . ID=rna-AB11_RS08100;Parent=gene-AB11_RS08100;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08100;product=RtT sRNA NZ_JHDH01000105.1 cmsearch exon 16499 16630 . - . ID=exon-AB11_RS08100-1;Parent=rna-AB11_RS08100;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08100;product=RtT sRNA NZ_JHDH01000105.1 RefSeq gene 16677 16808 . - . ID=gene-AB11_RS08105;Name=AB11_RS08105;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS08105 NZ_JHDH01000105.1 cmsearch ncRNA 16677 16808 . - . ID=rna-AB11_RS08105;Parent=gene-AB11_RS08105;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08105;product=RtT sRNA NZ_JHDH01000105.1 cmsearch exon 16677 16808 . - . ID=exon-AB11_RS08105-1;Parent=rna-AB11_RS08105;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08105;product=RtT sRNA NZ_JHDH01000105.1 RefSeq gene 16855 16986 . - . ID=gene-AB11_RS08110;Name=AB11_RS08110;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS08110 NZ_JHDH01000105.1 cmsearch ncRNA 16855 16986 . - . ID=rna-AB11_RS08110;Parent=gene-AB11_RS08110;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08110;product=RtT sRNA NZ_JHDH01000105.1 cmsearch exon 16855 16986 . - . ID=exon-AB11_RS08110-1;Parent=rna-AB11_RS08110;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08110;product=RtT sRNA NZ_JHDH01000105.1 RefSeq gene 17033 17117 . - . ID=gene-AB11_RS08115;Name=AB11_RS08115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS08115;old_locus_tag=AB11_1319 NZ_JHDH01000105.1 tRNAscan-SE tRNA 17033 17117 . - . ID=rna-AB11_RS08115;Parent=gene-AB11_RS08115;anticodon=(pos:complement(17081..17083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS08115;product=tRNA-Tyr NZ_JHDH01000105.1 tRNAscan-SE exon 17033 17117 . - . ID=exon-AB11_RS08115-1;Parent=rna-AB11_RS08115;anticodon=(pos:complement(17081..17083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS08115;product=tRNA-Tyr NZ_JHDH01000105.1 RefSeq gene 17152 17283 . - . ID=gene-AB11_RS08120;Name=AB11_RS08120;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS08120 NZ_JHDH01000105.1 cmsearch ncRNA 17152 17283 . - . ID=rna-AB11_RS08120;Parent=gene-AB11_RS08120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08120;product=RtT sRNA NZ_JHDH01000105.1 cmsearch exon 17152 17283 . - . ID=exon-AB11_RS08120-1;Parent=rna-AB11_RS08120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS08120;product=RtT sRNA NZ_JHDH01000105.1 RefSeq gene 17327 17411 . - . ID=gene-AB11_RS08125;Name=AB11_RS08125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS08125;old_locus_tag=AB11_1320 NZ_JHDH01000105.1 tRNAscan-SE tRNA 17327 17411 . - . ID=rna-AB11_RS08125;Parent=gene-AB11_RS08125;anticodon=(pos:complement(17375..17377));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS08125;product=tRNA-Tyr NZ_JHDH01000105.1 tRNAscan-SE exon 17327 17411 . - . ID=exon-AB11_RS08125-1;Parent=rna-AB11_RS08125;anticodon=(pos:complement(17375..17377));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS08125;product=tRNA-Tyr NZ_JHDH01000105.1 RefSeq gene 17571 18413 . - . ID=gene-AB11_RS08130;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AB11_RS08130;old_locus_tag=AB11_1321 NZ_JHDH01000105.1 Protein Homology CDS 17571 18413 . - 0 ID=cds-WP_000555857.1;Parent=gene-AB11_RS08130;Dbxref=GenBank:WP_000555857.1;Name=WP_000555857.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AB11_RS08130;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 18463 18921 . - . ID=gene-AB11_RS08135;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AB11_RS08135;old_locus_tag=AB11_1322 NZ_JHDH01000105.1 Protein Homology CDS 18463 18921 . - 0 ID=cds-WP_001307143.1;Parent=gene-AB11_RS08135;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AB11_RS08135;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 19034 19939 . + . ID=gene-AB11_RS08140;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AB11_RS08140;old_locus_tag=AB11_1323 NZ_JHDH01000105.1 Protein Homology CDS 19034 19939 . + 0 ID=cds-WP_001295622.1;Parent=gene-AB11_RS08140;Dbxref=GenBank:WP_001295622.1;Name=WP_001295622.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AB11_RS08140;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 20031 21044 . + . ID=gene-AB11_RS08145;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AB11_RS08145;old_locus_tag=AB11_1324 NZ_JHDH01000105.1 Protein Homology CDS 20031 21044 . + 0 ID=cds-WP_000193447.1;Parent=gene-AB11_RS08145;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AB11_RS08145;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 21246 22154 . + . ID=gene-AB11_RS08150;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AB11_RS08150;old_locus_tag=AB11_1325 NZ_JHDH01000105.1 Protein Homology CDS 21246 22154 . + 0 ID=cds-WP_000718995.1;Parent=gene-AB11_RS08150;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AB11_RS08150;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 22298 22711 . - . ID=gene-AB11_RS08155;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AB11_RS08155;old_locus_tag=AB11_1326 NZ_JHDH01000105.1 Protein Homology CDS 22298 22711 . - 0 ID=cds-WP_001287378.1;Parent=gene-AB11_RS08155;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AB11_RS08155;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 23316 23933 . + . ID=gene-AB11_RS08160;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AB11_RS08160;old_locus_tag=AB11_1327 NZ_JHDH01000105.1 Protein Homology CDS 23316 23933 . + 0 ID=cds-WP_000068077.1;Parent=gene-AB11_RS08160;Dbxref=GenBank:WP_000068077.1;Name=WP_000068077.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415754.1;locus_tag=AB11_RS08160;product=thymidine kinase;protein_id=WP_000068077.1;transl_table=11 NZ_JHDH01000105.1 RefSeq pseudogene 24215 25111 . - . ID=gene-AB11_RS08165;Name=AB11_RS08165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08165;old_locus_tag=AB11_1328;pseudo=true NZ_JHDH01000105.1 Protein Homology CDS 24215 25111 . - 0 ID=cds-AB11_RS08165;Parent=gene-AB11_RS08165;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AB11_RS08165;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 25235 27910 . - . ID=gene-AB11_RS08170;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AB11_RS08170;old_locus_tag=AB11_1331 NZ_JHDH01000105.1 Protein Homology CDS 25235 27910 . - 0 ID=cds-WP_000301651.1;Parent=gene-AB11_RS08170;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AB11_RS08170;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 28303 28356 . + . ID=gene-AB11_RS25295;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB11_RS25295 NZ_JHDH01000105.1 Protein Homology CDS 28303 28356 . + 0 ID=cds-WP_211180492.1;Parent=gene-AB11_RS25295;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AB11_RS25295;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JHDH01000105.1 RefSeq gene 28387 29034 . + . ID=gene-AB11_RS08175;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB11_RS08175;old_locus_tag=AB11_1332 NZ_JHDH01000105.1 Protein Homology CDS 28387 29034 . + 0 ID=cds-WP_000616554.1;Parent=gene-AB11_RS08175;Dbxref=GenBank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AB11_RS08175;product=NAAT family transporter YchE;protein_id=WP_000616554.1;transl_table=11 NZ_JHDH01000105.1 RefSeq pseudogene 29309 29903 . + . ID=gene-AB11_RS08180;Name=AB11_RS08180;end_range=29903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08180;old_locus_tag=AB11_1333;partial=true;pseudo=true NZ_JHDH01000105.1 Protein Homology CDS 29309 29903 . + 0 ID=cds-AB11_RS08180;Parent=gene-AB11_RS08180;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=29903,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS08180;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000106.1 1 17003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000106.1 RefSeq region 1 17003 . + . ID=NZ_JHDH01000106.1:1..17003;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000106.1 RefSeq pseudogene 1 636 . - . ID=gene-AB11_RS08185;Name=AB11_RS08185;end_range=636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08185;old_locus_tag=AB11_1334;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000106.1 Protein Homology CDS 1 636 . - 0 ID=cds-AB11_RS08185;Parent=gene-AB11_RS08185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=636,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB11_RS08185;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 643 1794 . - . ID=gene-AB11_RS08190;Name=AB11_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08190;old_locus_tag=AB11_1335 NZ_JHDH01000106.1 Protein Homology CDS 643 1794 . - 0 ID=cds-WP_021570937.1;Parent=gene-AB11_RS08190;Dbxref=GenBank:WP_021570937.1;Name=WP_021570937.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AB11_RS08190;product=IS30-like element IS30 family transposase;protein_id=WP_021570937.1;transl_table=11 NZ_JHDH01000106.1 RefSeq pseudogene 1814 2119 . - . ID=gene-AB11_RS08195;Name=AB11_RS08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08195;partial=true;pseudo=true;start_range=.,1814 NZ_JHDH01000106.1 Protein Homology CDS 1814 2119 . - 0 ID=cds-AB11_RS08195;Parent=gene-AB11_RS08195;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB11_RS08195;partial=true;product=transposase;pseudo=true;start_range=.,1814;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 2300 3244 . - . ID=gene-AB11_RS08200;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AB11_RS08200;old_locus_tag=AB11_1337 NZ_JHDH01000106.1 Protein Homology CDS 2300 3244 . - 0 ID=cds-WP_021570936.1;Parent=gene-AB11_RS08200;Dbxref=GenBank:WP_021570936.1;Name=WP_021570936.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858371.1;locus_tag=AB11_RS08200;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_021570936.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 3309 4259 . - . ID=gene-AB11_RS08205;Name=virK;gbkey=Gene;gene=virK;gene_biotype=protein_coding;locus_tag=AB11_RS08205;old_locus_tag=AB11_1338 NZ_JHDH01000106.1 Protein Homology CDS 3309 4259 . - 0 ID=cds-WP_001300030.1;Parent=gene-AB11_RS08205;Dbxref=GenBank:WP_001300030.1;Name=WP_001300030.1;gbkey=CDS;gene=virK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858370.1;locus_tag=AB11_RS08205;product=virulence factor VirK;protein_id=WP_001300030.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 4264 5352 . - . ID=gene-AB11_RS08210;Name=capU;gbkey=Gene;gene=capU;gene_biotype=protein_coding;locus_tag=AB11_RS08210 NZ_JHDH01000106.1 Protein Homology CDS 4264 5352 . - 0 ID=cds-WP_001388979.1;Parent=gene-AB11_RS08210;Dbxref=GenBank:WP_001388979.1;Name=WP_001388979.1;gbkey=CDS;gene=capU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858369.1;locus_tag=AB11_RS08210;product=putative hexosyltransferase CapU;protein_id=WP_001388979.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 5355 6197 . - . ID=gene-AB11_RS08215;Name=AB11_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08215;old_locus_tag=AB11_1340 NZ_JHDH01000106.1 Protein Homology CDS 5355 6197 . - 0 ID=cds-WP_160371899.1;Parent=gene-AB11_RS08215;Dbxref=GenBank:WP_160371899.1;Name=WP_160371899.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858368.1;locus_tag=AB11_RS08215;product=polysaccharide deacetylase family protein;protein_id=WP_160371899.1;transl_table=11 NZ_JHDH01000106.1 RefSeq pseudogene 6383 7579 . + . ID=gene-AB11_RS08220;Name=AB11_RS08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08220;pseudo=true NZ_JHDH01000106.1 Protein Homology CDS 6383 7579 . + 0 ID=cds-AB11_RS08220;Parent=gene-AB11_RS08220;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=AB11_RS08220;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 7662 7919 . + . ID=gene-AB11_RS08225;Name=AB11_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08225;old_locus_tag=AB11_1343 NZ_JHDH01000106.1 GeneMarkS-2+ CDS 7662 7919 . + 0 ID=cds-WP_000177057.1;Parent=gene-AB11_RS08225;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS08225;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 8477 9244 . - . ID=gene-AB11_RS08230;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AB11_RS08230;old_locus_tag=AB11_1344 NZ_JHDH01000106.1 Protein Homology CDS 8477 9244 . - 0 ID=cds-WP_001385328.1;Parent=gene-AB11_RS08230;Dbxref=GenBank:WP_001385328.1;Name=WP_001385328.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AB11_RS08230;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_001385328.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 9245 10201 . - . ID=gene-AB11_RS08235;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AB11_RS08235;old_locus_tag=AB11_1346 NZ_JHDH01000106.1 Protein Homology CDS 9245 10201 . - 0 ID=cds-WP_000684856.1;Parent=gene-AB11_RS08235;Dbxref=GenBank:WP_000684856.1;Name=WP_000684856.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AB11_RS08235;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684856.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 10198 11196 . - . ID=gene-AB11_RS08240;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AB11_RS08240;old_locus_tag=AB11_1347 NZ_JHDH01000106.1 Protein Homology CDS 10198 11196 . - 0 ID=cds-WP_000125187.1;Parent=gene-AB11_RS08240;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AB11_RS08240;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 11193 12095 . - . ID=gene-AB11_RS08245;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AB11_RS08245;old_locus_tag=AB11_1348 NZ_JHDH01000106.1 Protein Homology CDS 11193 12095 . - 0 ID=cds-WP_000879160.1;Parent=gene-AB11_RS08245;Dbxref=GenBank:WP_000879160.1;Name=WP_000879160.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AB11_RS08245;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879160.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 12140 14464 . - . ID=gene-AB11_RS08250;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AB11_RS08250;old_locus_tag=AB11_1349 NZ_JHDH01000106.1 Protein Homology CDS 12140 14464 . - 0 ID=cds-WP_032223246.1;Parent=gene-AB11_RS08250;Dbxref=GenBank:WP_032223246.1;Name=WP_032223246.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AB11_RS08250;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_032223246.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 14551 15504 . - . ID=gene-AB11_RS08255;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AB11_RS08255;old_locus_tag=AB11_1350 NZ_JHDH01000106.1 Protein Homology CDS 14551 15504 . - 0 ID=cds-WP_001068911.1;Parent=gene-AB11_RS08255;Dbxref=GenBank:WP_001068911.1;Name=WP_001068911.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AB11_RS08255;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001068911.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 15501 16022 . - . ID=gene-AB11_RS08260;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AB11_RS08260;old_locus_tag=AB11_1351 NZ_JHDH01000106.1 Protein Homology CDS 15501 16022 . - 0 ID=cds-WP_001283626.1;Parent=gene-AB11_RS08260;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AB11_RS08260;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JHDH01000106.1 RefSeq gene 16159 16227 . + . ID=gene-AB11_RS25300;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AB11_RS25300 NZ_JHDH01000106.1 Protein Homology CDS 16159 16227 . + 0 ID=cds-WP_211180522.1;Parent=gene-AB11_RS25300;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AB11_RS25300;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JHDH01000106.1 RefSeq pseudogene 16314 17003 . + . ID=gene-AB11_RS08265;Name=AB11_RS08265;end_range=17003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08265;partial=true;pseudo=true NZ_JHDH01000106.1 Protein Homology CDS 16314 17003 . + 0 ID=cds-AB11_RS08265;Parent=gene-AB11_RS08265;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=17003,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS08265;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000107.1 1 122950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000107.1 RefSeq region 1 122950 . + . ID=NZ_JHDH01000107.1:1..122950;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000107.1 RefSeq gene 51 748 . + . ID=gene-AB11_RS08270;Name=AB11_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08270;old_locus_tag=AB11_1355 NZ_JHDH01000107.1 Protein Homology CDS 51 300 . + 0 ID=cds-WP_095033700.1-3;Parent=gene-AB11_RS08270;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS08270;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000107.1 Protein Homology CDS 300 748 . + 2 ID=cds-WP_095033700.1-3;Parent=gene-AB11_RS08270;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS08270;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 1291 2922 . + . ID=gene-AB11_RS08275;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AB11_RS08275;old_locus_tag=AB11_1356 NZ_JHDH01000107.1 Protein Homology CDS 1291 2922 . + 0 ID=cds-WP_001297114.1;Parent=gene-AB11_RS08275;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AB11_RS08275;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 3008 3928 . + . ID=gene-AB11_RS08280;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AB11_RS08280;old_locus_tag=AB11_1357 NZ_JHDH01000107.1 Protein Homology CDS 3008 3928 . + 0 ID=cds-WP_000911112.1;Parent=gene-AB11_RS08280;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AB11_RS08280;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 3943 4851 . + . ID=gene-AB11_RS08285;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AB11_RS08285;old_locus_tag=AB11_1358 NZ_JHDH01000107.1 Protein Homology CDS 3943 4851 . + 0 ID=cds-WP_000979661.1;Parent=gene-AB11_RS08285;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AB11_RS08285;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 4863 5876 . + . ID=gene-AB11_RS08290;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AB11_RS08290;old_locus_tag=AB11_1359 NZ_JHDH01000107.1 Protein Homology CDS 4863 5876 . + 0 ID=cds-WP_000110945.1;Parent=gene-AB11_RS08290;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AB11_RS08290;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 5873 6877 . + . ID=gene-AB11_RS08295;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AB11_RS08295;old_locus_tag=AB11_1360 NZ_JHDH01000107.1 Protein Homology CDS 5873 6877 . + 0 ID=cds-WP_000994905.1;Parent=gene-AB11_RS08295;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AB11_RS08295;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 6930 7259 . - . ID=gene-AB11_RS08300;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AB11_RS08300;old_locus_tag=AB11_1361 NZ_JHDH01000107.1 Protein Homology CDS 6930 7259 . - 0 ID=cds-WP_000366959.1;Parent=gene-AB11_RS08300;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AB11_RS08300;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 7294 8754 . - . ID=gene-AB11_RS08305;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AB11_RS08305;old_locus_tag=AB11_1362 NZ_JHDH01000107.1 Protein Homology CDS 7294 8754 . - 0 ID=cds-WP_000214516.1;Parent=gene-AB11_RS08305;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AB11_RS08305;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 8897 9070 . + . ID=gene-AB11_RS08310;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AB11_RS08310 NZ_JHDH01000107.1 Protein Homology CDS 8897 9070 . + 0 ID=cds-WP_001309467.1;Parent=gene-AB11_RS08310;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AB11_RS08310;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 9125 10378 . - . ID=gene-AB11_RS08315;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AB11_RS08315;old_locus_tag=AB11_1363 NZ_JHDH01000107.1 Protein Homology CDS 9125 10378 . - 0 ID=cds-WP_001295624.1;Parent=gene-AB11_RS08315;Dbxref=GenBank:WP_001295624.1;Name=WP_001295624.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415766.1;locus_tag=AB11_RS08315;product=voltage-gated potassium channel protein;protein_id=WP_001295624.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 10678 10974 . - . ID=gene-AB11_RS08320;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AB11_RS08320;old_locus_tag=AB11_1364 NZ_JHDH01000107.1 Protein Homology CDS 10678 10974 . - 0 ID=cds-WP_000967595.1;Parent=gene-AB11_RS08320;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AB11_RS08320;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 11198 11917 . + . ID=gene-AB11_RS08325;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AB11_RS08325;old_locus_tag=AB11_1365 NZ_JHDH01000107.1 Protein Homology CDS 11198 11917 . + 0 ID=cds-WP_001360141.1;Parent=gene-AB11_RS08325;Dbxref=GenBank:WP_001360141.1;Name=WP_001360141.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AB11_RS08325;product=TonB system transport protein TonB;protein_id=WP_001360141.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 11957 12355 . - . ID=gene-AB11_RS08330;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AB11_RS08330;old_locus_tag=AB11_1366 NZ_JHDH01000107.1 Protein Homology CDS 11957 12355 . - 0 ID=cds-WP_000108160.1;Parent=gene-AB11_RS08330;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AB11_RS08330;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 12460 12999 . - . ID=gene-AB11_RS08335;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AB11_RS08335;old_locus_tag=AB11_1367 NZ_JHDH01000107.1 Protein Homology CDS 12460 12999 . - 0 ID=cds-WP_000808667.1;Parent=gene-AB11_RS08335;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AB11_RS08335;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 13029 13772 . - . ID=gene-AB11_RS08340;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AB11_RS08340;old_locus_tag=AB11_1368 NZ_JHDH01000107.1 Protein Homology CDS 13029 13772 . - 0 ID=cds-WP_032223252.1;Parent=gene-AB11_RS08340;Dbxref=GenBank:WP_032223252.1;Name=WP_032223252.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AB11_RS08340;product=YciC family protein;protein_id=WP_032223252.1;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 13800 13889 . - . ID=gene-AB11_RS08345;Name=AB11_RS08345;end_range=13889,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08345;partial=true;pseudo=true NZ_JHDH01000107.1 Protein Homology CDS 13800 13889 . - 0 ID=cds-AB11_RS08345;Parent=gene-AB11_RS08345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AB11_RS08345;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 14129 14767 . + . ID=gene-AB11_RS08350;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AB11_RS08350;old_locus_tag=AB11_1369 NZ_JHDH01000107.1 Protein Homology CDS 14129 14767 . + 0 ID=cds-WP_000737226.1;Parent=gene-AB11_RS08350;Dbxref=GenBank:WP_000737226.1;Name=WP_000737226.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AB11_RS08350;product=outer membrane protein OmpW;protein_id=WP_000737226.1;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 14827 15332 . - . ID=gene-AB11_RS08355;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=pseudogene;locus_tag=AB11_RS08355;old_locus_tag=AB11_1370;pseudo=true NZ_JHDH01000107.1 Protein Homology CDS 14827 15332 . - 0 ID=cds-AB11_RS08355;Parent=gene-AB11_RS08355;Note=frameshifted;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AB11_RS08355;product=ferritin-like domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 15378 15878 . - . ID=gene-AB11_RS08360;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AB11_RS08360;old_locus_tag=AB11_1371 NZ_JHDH01000107.1 Protein Homology CDS 15378 15878 . - 0 ID=cds-WP_001056490.1;Parent=gene-AB11_RS08360;Dbxref=GenBank:WP_001056490.1;Name=WP_001056490.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;gene=yciF;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AB11_RS08360;product=YciE/YciF ferroxidase family protein;protein_id=WP_001056490.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 15964 16143 . - . ID=gene-AB11_RS08365;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AB11_RS08365;old_locus_tag=AB11_1372 NZ_JHDH01000107.1 Protein Homology CDS 15964 16143 . - 0 ID=cds-WP_000807651.1;Parent=gene-AB11_RS08365;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AB11_RS08365;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 16524 17330 . - . ID=gene-AB11_RS08370;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AB11_RS08370;old_locus_tag=AB11_1373 NZ_JHDH01000107.1 Protein Homology CDS 16524 17330 . - 0 ID=cds-WP_000443067.1;Parent=gene-AB11_RS08370;Dbxref=GenBank:WP_000443067.1;Name=WP_000443067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AB11_RS08370;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 17330 18523 . - . ID=gene-AB11_RS08375;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AB11_RS08375;old_locus_tag=AB11_1374 NZ_JHDH01000107.1 Protein Homology CDS 17330 18523 . - 0 ID=cds-WP_000209520.1;Parent=gene-AB11_RS08375;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AB11_RS08375;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 18535 19896 . - . ID=gene-AB11_RS08380;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AB11_RS08380;old_locus_tag=AB11_1375 NZ_JHDH01000107.1 Protein Homology CDS 18535 19896 . - 0 ID=cds-WP_072134955.1;Parent=gene-AB11_RS08380;Dbxref=GenBank:WP_072134955.1;Name=WP_072134955.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415778.3;locus_tag=AB11_RS08380;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_072134955.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 19897 21492 . - . ID=gene-AB11_RS08385;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AB11_RS08385;old_locus_tag=AB11_1376 NZ_JHDH01000107.1 Protein Homology CDS 19897 21492 . - 0 ID=cds-WP_000763511.1;Parent=gene-AB11_RS08385;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AB11_RS08385;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 21492 23054 . - . ID=gene-AB11_RS08390;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AB11_RS08390;old_locus_tag=AB11_1377 NZ_JHDH01000107.1 Protein Homology CDS 21492 23054 . - 0 ID=cds-WP_001194582.1;Parent=gene-AB11_RS08390;Dbxref=GenBank:WP_001194582.1;Name=WP_001194582.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AB11_RS08390;product=anthranilate synthase component I;protein_id=WP_001194582.1;transl_table=11 NZ_JHDH01000107.1 cmsearch sequence_feature 23076 23169 . - . ID=id-NZ_JHDH01000107.1:23076..23169;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000107.1 RefSeq gene 23146 23190 . - . ID=gene-AB11_RS08395;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AB11_RS08395 NZ_JHDH01000107.1 Protein Homology CDS 23146 23190 . - 0 ID=cds-WP_001700591.1;Parent=gene-AB11_RS08395;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AB11_RS08395;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 23328 24209 . + . ID=gene-AB11_RS08400;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AB11_RS08400;old_locus_tag=AB11_1378 NZ_JHDH01000107.1 Protein Homology CDS 23328 24209 . + 0 ID=cds-WP_001285661.1;Parent=gene-AB11_RS08400;Dbxref=GenBank:WP_001285661.1;Name=WP_001285661.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AB11_RS08400;product=RNase RNM;protein_id=WP_001285661.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 24206 24826 . + . ID=gene-AB11_RS08405;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AB11_RS08405;old_locus_tag=AB11_1379 NZ_JHDH01000107.1 Protein Homology CDS 24206 24826 . + 0 ID=cds-WP_001460825.1;Parent=gene-AB11_RS08405;Dbxref=GenBank:WP_001460825.1;Name=WP_001460825.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AB11_RS08405;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001460825.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 24854 26749 . + . ID=gene-AB11_RS08410;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AB11_RS08410;old_locus_tag=AB11_1380 NZ_JHDH01000107.1 Protein Homology CDS 24854 26749 . + 0 ID=cds-WP_001326916.1;Parent=gene-AB11_RS08410;Dbxref=GenBank:WP_001326916.1;Name=WP_001326916.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AB11_RS08410;product=DUF2207 domain-containing protein;protein_id=WP_001326916.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 26960 27835 . + . ID=gene-AB11_RS08415;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AB11_RS08415;old_locus_tag=AB11_1381 NZ_JHDH01000107.1 Protein Homology CDS 26960 27835 . + 0 ID=cds-WP_001291217.1;Parent=gene-AB11_RS08415;Dbxref=GenBank:WP_001291217.1;Name=WP_001291217.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AB11_RS08415;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291217.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 27875 28465 . - . ID=gene-AB11_RS08420;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AB11_RS08420;old_locus_tag=AB11_1382 NZ_JHDH01000107.1 Protein Homology CDS 27875 28465 . - 0 ID=cds-WP_001278906.1;Parent=gene-AB11_RS08420;Dbxref=GenBank:WP_001278906.1;Name=WP_001278906.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AB11_RS08420;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278906.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 28462 29220 . - . ID=gene-AB11_RS08425;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AB11_RS08425;old_locus_tag=AB11_1383 NZ_JHDH01000107.1 Protein Homology CDS 28462 29220 . - 0 ID=cds-WP_000559286.1;Parent=gene-AB11_RS08425;Dbxref=GenBank:WP_000559286.1;Name=WP_000559286.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415787.1;locus_tag=AB11_RS08425;product=YciK family oxidoreductase;protein_id=WP_000559286.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 29440 30489 . + . ID=gene-AB11_RS08430;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AB11_RS08430;old_locus_tag=AB11_1384 NZ_JHDH01000107.1 Protein Homology CDS 29440 30489 . + 0 ID=cds-WP_000422045.1;Parent=gene-AB11_RS08430;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AB11_RS08430;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 30525 30776 . - . ID=gene-AB11_RS08435;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AB11_RS08435;old_locus_tag=AB11_1385 NZ_JHDH01000107.1 Protein Homology CDS 30525 30776 . - 0 ID=cds-WP_001031530.1;Parent=gene-AB11_RS08435;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AB11_RS08435;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 31156 33753 . + . ID=gene-AB11_RS08440;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AB11_RS08440;old_locus_tag=AB11_1386 NZ_JHDH01000107.1 Protein Homology CDS 31156 33753 . + 0 ID=cds-WP_001297122.1;Parent=gene-AB11_RS08440;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AB11_RS08440;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 33963 34937 . + . ID=gene-AB11_RS08445;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AB11_RS08445;old_locus_tag=AB11_1387 NZ_JHDH01000107.1 Protein Homology CDS 33963 34937 . + 0 ID=cds-WP_000776253.1;Parent=gene-AB11_RS08445;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AB11_RS08445;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 35256 35396 . + . ID=gene-AB11_RS08450;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AB11_RS08450;old_locus_tag=AB11_1388 NZ_JHDH01000107.1 Protein Homology CDS 35256 35396 . + 0 ID=cds-WP_001300896.1;Parent=gene-AB11_RS08450;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AB11_RS08450;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 35399 35566 . + . ID=gene-AB11_RS08455;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AB11_RS08455;old_locus_tag=AB11_1389 NZ_JHDH01000107.1 Protein Homology CDS 35399 35566 . + 0 ID=cds-WP_001297116.1;Parent=gene-AB11_RS08455;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AB11_RS08455;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 35680 35775 . + . ID=gene-AB11_RS08460;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AB11_RS08460 NZ_JHDH01000107.1 Protein Homology CDS 35680 35775 . + 0 ID=cds-WP_001310756.1;Parent=gene-AB11_RS08460;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AB11_RS08460;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 35939 38614 . + . ID=gene-AB11_RS08465;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AB11_RS08465;old_locus_tag=AB11_1390 NZ_JHDH01000107.1 Protein Homology CDS 35939 38614 . + 0 ID=cds-WP_032223254.1;Parent=gene-AB11_RS08465;Dbxref=GenBank:WP_032223254.1;Name=WP_032223254.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AB11_RS08465;product=aconitate hydratase AcnA;protein_id=WP_032223254.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 38678 39268 . - . ID=gene-AB11_RS08470;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AB11_RS08470;old_locus_tag=AB11_1391 NZ_JHDH01000107.1 Protein Homology CDS 38678 39268 . - 0 ID=cds-WP_001176295.1;Parent=gene-AB11_RS08470;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AB11_RS08470;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 39438 40202 . + . ID=gene-AB11_RS08475;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AB11_RS08475;old_locus_tag=AB11_1392 NZ_JHDH01000107.1 Protein Homology CDS 39438 40202 . + 0 ID=cds-WP_001256538.1;Parent=gene-AB11_RS08475;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AB11_RS08475;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 40351 40659 . + . ID=gene-AB11_RS08480;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AB11_RS08480;old_locus_tag=AB11_1393 NZ_JHDH01000107.1 Protein Homology CDS 40351 40659 . + 0 ID=cds-WP_021570767.1;Parent=gene-AB11_RS08480;Dbxref=GenBank:WP_021570767.1;Name=WP_021570767.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AB11_RS08480;product=lipopolysaccharide assembly protein LapA;protein_id=WP_021570767.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 40666 41835 . + . ID=gene-AB11_RS08485;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AB11_RS08485;old_locus_tag=AB11_1394 NZ_JHDH01000107.1 Protein Homology CDS 40666 41835 . + 0 ID=cds-WP_000891353.1;Parent=gene-AB11_RS08485;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AB11_RS08485;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 42029 42766 . + . ID=gene-AB11_RS08490;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AB11_RS08490;old_locus_tag=AB11_1396 NZ_JHDH01000107.1 Protein Homology CDS 42029 42766 . + 0 ID=cds-WP_000176270.1;Parent=gene-AB11_RS08490;Dbxref=GenBank:WP_000176270.1;Name=WP_000176270.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AB11_RS08490;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 42766 43092 . + . ID=gene-AB11_RS08495;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AB11_RS08495;old_locus_tag=AB11_1397 NZ_JHDH01000107.1 Protein Homology CDS 42766 43092 . + 0 ID=cds-WP_001295580.1;Parent=gene-AB11_RS08495;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AB11_RS08495;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 43218 43436 . - . ID=gene-AB11_RS08500;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AB11_RS08500;old_locus_tag=AB11_1398 NZ_JHDH01000107.1 Protein Homology CDS 43218 43436 . - 0 ID=cds-WP_000498253.1;Parent=gene-AB11_RS08500;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AB11_RS08500;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 43705 44454 . - . ID=gene-AB11_RS08505;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=AB11_RS08505;old_locus_tag=AB11_1399 NZ_JHDH01000107.1 Protein Homology CDS 43705 44454 . - 0 ID=cds-WP_001088621.1;Parent=gene-AB11_RS08505;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AB11_RS08505;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 44544 44717 . - . ID=gene-AB11_RS08510;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AB11_RS08510;old_locus_tag=AB11_1400 NZ_JHDH01000107.1 Protein Homology CDS 44544 44717 . - 0 ID=cds-WP_001288368.1;Parent=gene-AB11_RS08510;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AB11_RS08510;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 44755 44883 . + . ID=gene-AB11_RS25305;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AB11_RS25305 NZ_JHDH01000107.1 Protein Homology CDS 44755 44883 . + 0 ID=cds-WP_211180493.1;Parent=gene-AB11_RS25305;Dbxref=GenBank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AB11_RS25305;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 44865 46850 . - . ID=gene-AB11_RS08515;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AB11_RS08515;old_locus_tag=AB11_1401 NZ_JHDH01000107.1 Protein Homology CDS 44865 46850 . - 0 ID=cds-WP_032223255.1;Parent=gene-AB11_RS08515;Dbxref=GenBank:WP_032223255.1;Name=WP_032223255.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=AB11_RS08515;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032223255.1;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 46904 47007 . + . ID=gene-AB11_RS08520;Name=AB11_RS08520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08520;pseudo=true NZ_JHDH01000107.1 Protein Homology CDS 46904 47007 . + 0 ID=cds-AB11_RS08520;Parent=gene-AB11_RS08520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AB11_RS08520;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 47085 49019 . - . ID=gene-AB11_RS08525;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AB11_RS08525;old_locus_tag=AB11_1402 NZ_JHDH01000107.1 Protein Homology CDS 47085 49019 . - 0 ID=cds-WP_021570768.1;Parent=gene-AB11_RS08525;Dbxref=GenBank:WP_021570768.1;Name=WP_021570768.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AB11_RS08525;product=exoribonuclease II;protein_id=WP_021570768.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 49087 50214 . - . ID=gene-AB11_RS08530;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AB11_RS08530;old_locus_tag=AB11_1403 NZ_JHDH01000107.1 Protein Homology CDS 49087 50214 . - 0 ID=cds-WP_001335988.1;Parent=gene-AB11_RS08530;Dbxref=GenBank:WP_001335988.1;Name=WP_001335988.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AB11_RS08530;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001335988.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 50358 51146 . - . ID=gene-AB11_RS08535;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AB11_RS08535;old_locus_tag=AB11_1404 NZ_JHDH01000107.1 Protein Homology CDS 50358 51146 . - 0 ID=cds-WP_000506490.1;Parent=gene-AB11_RS08535;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AB11_RS08535;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 51514 51867 . - . ID=gene-AB11_RS08540;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AB11_RS08540 NZ_JHDH01000107.1 Protein Homology CDS 51514 51867 . - 0 ID=cds-WP_000565727.1;Parent=gene-AB11_RS08540;Dbxref=GenBank:WP_000565727.1;Name=WP_000565727.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AB11_RS08540;product=DUF559 domain-containing protein;protein_id=WP_000565727.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 51935 52741 . - . ID=gene-AB11_RS08545;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AB11_RS08545;old_locus_tag=AB11_1406 NZ_JHDH01000107.1 Protein Homology CDS 51935 52741 . - 0 ID=cds-WP_000573407.1;Parent=gene-AB11_RS08545;Dbxref=GenBank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AB11_RS08545;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 52743 53735 . - . ID=gene-AB11_RS08550;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AB11_RS08550;old_locus_tag=AB11_1407 NZ_JHDH01000107.1 Protein Homology CDS 52743 53735 . - 0 ID=cds-WP_001128858.1;Parent=gene-AB11_RS08550;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AB11_RS08550;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 53735 54625 . - . ID=gene-AB11_RS08555;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AB11_RS08555;old_locus_tag=AB11_1408 NZ_JHDH01000107.1 Protein Homology CDS 53735 54625 . - 0 ID=cds-WP_001146163.1;Parent=gene-AB11_RS08555;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AB11_RS08555;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 54612 55577 . - . ID=gene-AB11_RS08560;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AB11_RS08560;old_locus_tag=AB11_1409 NZ_JHDH01000107.1 Protein Homology CDS 54612 55577 . - 0 ID=cds-WP_000583277.1;Parent=gene-AB11_RS08560;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AB11_RS08560;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 55574 57217 . - . ID=gene-AB11_RS08565;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AB11_RS08565;old_locus_tag=AB11_1410 NZ_JHDH01000107.1 Protein Homology CDS 55574 57217 . - 0 ID=cds-WP_001250216.1;Parent=gene-AB11_RS08565;Dbxref=GenBank:WP_001250216.1;Name=WP_001250216.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AB11_RS08565;product=ABC transporter substrate-binding protein SapA;protein_id=WP_001250216.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 57530 57775 . - . ID=gene-AB11_RS08570;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AB11_RS08570;old_locus_tag=AB11_1411 NZ_JHDH01000107.1 Protein Homology CDS 57530 57775 . - 0 ID=cds-WP_032223256.1;Parent=gene-AB11_RS08570;Dbxref=GenBank:WP_032223256.1;Name=WP_032223256.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AB11_RS08570;product=YmjA family protein;protein_id=WP_032223256.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 57909 59294 . - . ID=gene-AB11_RS08575;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AB11_RS08575;old_locus_tag=AB11_1412 NZ_JHDH01000107.1 Protein Homology CDS 57909 59294 . - 0 ID=cds-WP_000996856.1;Parent=gene-AB11_RS08575;Dbxref=GenBank:WP_000996856.1;Name=WP_000996856.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415812.4;locus_tag=AB11_RS08575;product=putrescine/proton symporter PuuP;protein_id=WP_000996856.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 59284 59448 . - . ID=gene-AB11_RS08580;Name=ymjE;gbkey=Gene;gene=ymjE;gene_biotype=protein_coding;locus_tag=AB11_RS08580 NZ_JHDH01000107.1 Protein Homology CDS 59284 59448 . - 0 ID=cds-WP_120795382.1;Parent=gene-AB11_RS08580;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;gene=ymjE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AB11_RS08580;product=YmjE family protein;protein_id=WP_120795382.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 59597 61015 . - . ID=gene-AB11_RS08585;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AB11_RS08585;old_locus_tag=AB11_1413 NZ_JHDH01000107.1 Protein Homology CDS 59597 61015 . - 0 ID=cds-WP_001296746.1;Parent=gene-AB11_RS08585;Dbxref=GenBank:WP_001296746.1;Name=WP_001296746.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AB11_RS08585;product=glutamate-putrescine ligase;protein_id=WP_001296746.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 61227 61991 . + . ID=gene-AB11_RS08590;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AB11_RS08590 NZ_JHDH01000107.1 Protein Homology CDS 61227 61991 . + 0 ID=cds-WP_001300506.1;Parent=gene-AB11_RS08590;Dbxref=GenBank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AB11_RS08590;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 62018 62575 . + . ID=gene-AB11_RS08595;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AB11_RS08595;old_locus_tag=AB11_1417 NZ_JHDH01000107.1 Protein Homology CDS 62018 62575 . + 0 ID=cds-WP_001278727.1;Parent=gene-AB11_RS08595;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AB11_RS08595;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 62850 64337 . + . ID=gene-AB11_RS08600;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AB11_RS08600;old_locus_tag=AB11_1418 NZ_JHDH01000107.1 Protein Homology CDS 62850 64337 . + 0 ID=cds-WP_001009090.1;Parent=gene-AB11_RS08600;Dbxref=GenBank:WP_001009090.1;Name=WP_001009090.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AB11_RS08600;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 64339 65619 . + . ID=gene-AB11_RS08605;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AB11_RS08605;old_locus_tag=AB11_1419 NZ_JHDH01000107.1 Protein Homology CDS 64339 65619 . + 0 ID=cds-WP_001637824.1;Parent=gene-AB11_RS08605;Dbxref=GenBank:WP_001637824.1;Name=WP_001637824.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AB11_RS08605;product=gamma-glutamylputrescine oxidase;protein_id=WP_001637824.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 65657 66922 . + . ID=gene-AB11_RS08610;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AB11_RS08610;old_locus_tag=AB11_1420 NZ_JHDH01000107.1 Protein Homology CDS 65657 66922 . + 0 ID=cds-WP_000069229.1;Parent=gene-AB11_RS08610;Dbxref=GenBank:WP_000069229.1;Name=WP_000069229.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AB11_RS08610;product=4-aminobutyrate transaminase;protein_id=WP_000069229.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 67042 68019 . - . ID=gene-AB11_RS08615;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AB11_RS08615;old_locus_tag=AB11_1421 NZ_JHDH01000107.1 Protein Homology CDS 67042 68019 . - 0 ID=cds-WP_001301108.1;Parent=gene-AB11_RS08615;Dbxref=GenBank:WP_001301108.1;Name=WP_001301108.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415819.4;locus_tag=AB11_RS08615;product=phage shock protein operon transcriptional activator;protein_id=WP_001301108.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 68186 68854 . + . ID=gene-AB11_RS08620;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AB11_RS08620;old_locus_tag=AB11_1422 NZ_JHDH01000107.1 Protein Homology CDS 68186 68854 . + 0 ID=cds-WP_000511025.1;Parent=gene-AB11_RS08620;Dbxref=GenBank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AB11_RS08620;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 68908 69132 . + . ID=gene-AB11_RS08625;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AB11_RS08625;old_locus_tag=AB11_1423 NZ_JHDH01000107.1 Protein Homology CDS 68908 69132 . + 0 ID=cds-WP_001274963.1;Parent=gene-AB11_RS08625;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AB11_RS08625;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 69132 69491 . + . ID=gene-AB11_RS08630;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AB11_RS08630;old_locus_tag=AB11_1424 NZ_JHDH01000107.1 Protein Homology CDS 69132 69491 . + 0 ID=cds-WP_021570770.1;Parent=gene-AB11_RS08630;Dbxref=GenBank:WP_021570770.1;Name=WP_021570770.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AB11_RS08630;product=envelope stress response membrane protein PspC;protein_id=WP_021570770.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 69500 69721 . + . ID=gene-AB11_RS08635;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AB11_RS08635;old_locus_tag=AB11_1425 NZ_JHDH01000107.1 Protein Homology CDS 69500 69721 . + 0 ID=cds-WP_001295585.1;Parent=gene-AB11_RS08635;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AB11_RS08635;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 69796 70110 . + . ID=gene-AB11_RS08640;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AB11_RS08640;old_locus_tag=AB11_1426 NZ_JHDH01000107.1 Protein Homology CDS 69796 70110 . + 0 ID=cds-WP_000473109.1;Parent=gene-AB11_RS08640;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AB11_RS08640;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 70323 72002 . + . ID=gene-AB11_RS08645;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AB11_RS08645;old_locus_tag=AB11_1427 NZ_JHDH01000107.1 Protein Homology CDS 70323 72002 . + 0 ID=cds-WP_000810500.1;Parent=gene-AB11_RS08645;Dbxref=GenBank:WP_000810500.1;Name=WP_000810500.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AB11_RS08645;product=glucosylglycerate phosphorylase;protein_id=WP_000810500.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 72016 73308 . + . ID=gene-AB11_RS08650;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AB11_RS08650;old_locus_tag=AB11_1428 NZ_JHDH01000107.1 Protein Homology CDS 72016 73308 . + 0 ID=cds-WP_000597460.1;Parent=gene-AB11_RS08650;Dbxref=GenBank:WP_000597460.1;Name=WP_000597460.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AB11_RS08650;product=ABC transporter substrate-binding protein;protein_id=WP_000597460.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 73329 74210 . + . ID=gene-AB11_RS08655;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AB11_RS08655;old_locus_tag=AB11_1429 NZ_JHDH01000107.1 Protein Homology CDS 73329 74210 . + 0 ID=cds-WP_001080790.1;Parent=gene-AB11_RS08655;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AB11_RS08655;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 74197 75039 . + . ID=gene-AB11_RS08660;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AB11_RS08660;old_locus_tag=AB11_1430 NZ_JHDH01000107.1 Protein Homology CDS 74197 75039 . + 0 ID=cds-WP_000224659.1;Parent=gene-AB11_RS08660;Dbxref=GenBank:WP_000224659.1;Name=WP_000224659.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AB11_RS08660;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 75070 76122 . + . ID=gene-AB11_RS08665;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AB11_RS08665;old_locus_tag=AB11_1431 NZ_JHDH01000107.1 Protein Homology CDS 75070 76122 . + 0 ID=cds-WP_000737347.1;Parent=gene-AB11_RS08665;Dbxref=GenBank:WP_000737347.1;Name=WP_000737347.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AB11_RS08665;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 76141 76929 . + . ID=gene-AB11_RS08670;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AB11_RS08670;old_locus_tag=AB11_1432 NZ_JHDH01000107.1 Protein Homology CDS 76141 76929 . + 0 ID=cds-WP_032223257.1;Parent=gene-AB11_RS08670;Dbxref=GenBank:WP_032223257.1;Name=WP_032223257.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AB11_RS08670;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032223257.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 76939 77994 . + . ID=gene-AB11_RS08675;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AB11_RS08675;old_locus_tag=AB11_1433 NZ_JHDH01000107.1 Protein Homology CDS 76939 77994 . + 0 ID=cds-WP_001463371.1;Parent=gene-AB11_RS08675;Dbxref=GenBank:WP_001463371.1;Name=WP_001463371.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=AB11_RS08675;product=Gfo/Idh/MocA family protein;protein_id=WP_001463371.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 77991 80258 . + . ID=gene-AB11_RS08680;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AB11_RS08680;old_locus_tag=AB11_1434 NZ_JHDH01000107.1 Protein Homology CDS 77991 80258 . + 0 ID=cds-WP_000198036.1;Parent=gene-AB11_RS08680;Dbxref=GenBank:WP_000198036.1;Name=WP_000198036.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AB11_RS08680;product=kojibiose phosphorylase;protein_id=WP_000198036.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 80255 80914 . + . ID=gene-AB11_RS08685;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AB11_RS08685;old_locus_tag=AB11_1435 NZ_JHDH01000107.1 Protein Homology CDS 80255 80914 . + 0 ID=cds-WP_000775794.1;Parent=gene-AB11_RS08685;Dbxref=GenBank:WP_000775794.1;Name=WP_000775794.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AB11_RS08685;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 80928 82010 . + . ID=gene-AB11_RS08690;Name=AB11_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08690;old_locus_tag=AB11_1436 NZ_JHDH01000107.1 Protein Homology CDS 80928 82010 . + 0 ID=cds-WP_000057985.1;Parent=gene-AB11_RS08690;Dbxref=GenBank:WP_000057985.1;Name=WP_000057985.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AB11_RS08690;product=ABC transporter ATP-binding protein;protein_id=WP_000057985.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 82055 82960 . + . ID=gene-AB11_RS08695;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AB11_RS08695;old_locus_tag=AB11_1437 NZ_JHDH01000107.1 Protein Homology CDS 82055 82960 . + 0 ID=cds-WP_032223259.1;Parent=gene-AB11_RS08695;Dbxref=GenBank:WP_032223259.1;Name=WP_032223259.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AB11_RS08695;product=monomeric porin OmpG;protein_id=WP_032223259.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 83071 84069 . - . ID=gene-AB11_RS08700;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AB11_RS08700;old_locus_tag=AB11_1438 NZ_JHDH01000107.1 Protein Homology CDS 83071 84069 . - 0 ID=cds-WP_000075375.1;Parent=gene-AB11_RS08700;Dbxref=GenBank:WP_000075375.1;Name=WP_000075375.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AB11_RS08700;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075375.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 84225 85622 . + . ID=gene-AB11_RS08705;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AB11_RS08705;old_locus_tag=AB11_1439 NZ_JHDH01000107.1 Protein Homology CDS 84225 85622 . + 0 ID=cds-WP_000825775.1;Parent=gene-AB11_RS08705;Dbxref=GenBank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AB11_RS08705;product=YcjX family protein;protein_id=WP_000825775.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 85619 86680 . + . ID=gene-AB11_RS08710;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AB11_RS08710;old_locus_tag=AB11_1440 NZ_JHDH01000107.1 Protein Homology CDS 85619 86680 . + 0 ID=cds-WP_000138728.1;Parent=gene-AB11_RS08710;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AB11_RS08710;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 86828 88369 . + . ID=gene-AB11_RS08715;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AB11_RS08715;old_locus_tag=AB11_1441 NZ_JHDH01000107.1 Protein Homology CDS 86828 88369 . + 0 ID=cds-WP_001300658.1;Parent=gene-AB11_RS08715;Dbxref=GenBank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AB11_RS08715;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 88413 88919 . - . ID=gene-AB11_RS08720;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AB11_RS08720;old_locus_tag=AB11_1442 NZ_JHDH01000107.1 Protein Homology CDS 88413 88919 . - 0 ID=cds-WP_000084387.1;Parent=gene-AB11_RS08720;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AB11_RS08720;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 89038 90003 . + . ID=gene-AB11_RS08725;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AB11_RS08725;old_locus_tag=AB11_1443 NZ_JHDH01000107.1 Protein Homology CDS 89038 90003 . + 0 ID=cds-WP_001261211.1;Parent=gene-AB11_RS08725;Dbxref=GenBank:WP_001261211.1;Name=WP_001261211.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415841.4;locus_tag=AB11_RS08725;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001261211.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 89978 90706 . - . ID=gene-AB11_RS08730;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AB11_RS08730;old_locus_tag=AB11_1444 NZ_JHDH01000107.1 Protein Homology CDS 89978 90706 . - 0 ID=cds-WP_000219122.1;Parent=gene-AB11_RS08730;Dbxref=GenBank:WP_000219122.1;Name=WP_000219122.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AB11_RS08730;product=murein tripeptide amidase MpaA;protein_id=WP_000219122.1;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 90833 90970 . - . ID=gene-AB11_RS08735;Name=AB11_RS08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08735;old_locus_tag=AB11_1445;partial=true;pseudo=true;start_range=.,90833 NZ_JHDH01000107.1 Protein Homology CDS 90833 90970 . - 0 ID=cds-AB11_RS08735;Parent=gene-AB11_RS08735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AB11_RS08735;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,90833;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 91041 91961 . - . ID=gene-AB11_RS08745;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AB11_RS08745;old_locus_tag=AB11_1446 NZ_JHDH01000107.1 Protein Homology CDS 91041 91961 . - 0 ID=cds-WP_001300523.1;Parent=gene-AB11_RS08745;Dbxref=GenBank:WP_001300523.1;Name=WP_001300523.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AB11_RS08745;product=alpha/beta hydrolase;protein_id=WP_001300523.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 92099 92998 . + . ID=gene-AB11_RS08750;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AB11_RS08750;old_locus_tag=AB11_1447 NZ_JHDH01000107.1 Protein Homology CDS 92099 92998 . + 0 ID=cds-WP_000817708.1;Parent=gene-AB11_RS08750;Dbxref=GenBank:WP_000817708.1;Name=WP_000817708.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415844.1;locus_tag=AB11_RS08750;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817708.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 93335 94948 . + . ID=gene-AB11_RS08755;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AB11_RS08755;old_locus_tag=AB11_1448 NZ_JHDH01000107.1 Protein Homology CDS 93335 94948 . + 0 ID=cds-WP_000683020.1;Parent=gene-AB11_RS08755;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AB11_RS08755;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 94999 96030 . - . ID=gene-AB11_RS08760;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AB11_RS08760;old_locus_tag=AB11_1449 NZ_JHDH01000107.1 Protein Homology CDS 94999 96030 . - 0 ID=cds-WP_000559900.1;Parent=gene-AB11_RS08760;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AB11_RS08760;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 96274 96531 . + . ID=gene-AB11_RS08765;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AB11_RS08765;old_locus_tag=AB11_1450 NZ_JHDH01000107.1 Protein Homology CDS 96274 96531 . + 0 ID=cds-WP_000605090.1;Parent=gene-AB11_RS08765;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AB11_RS08765;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 96581 97531 . - . ID=gene-AB11_RS08770;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AB11_RS08770;old_locus_tag=AB11_1451 NZ_JHDH01000107.1 Protein Homology CDS 96581 97531 . - 0 ID=cds-WP_001262126.1;Parent=gene-AB11_RS08770;Dbxref=GenBank:WP_001262126.1;Name=WP_001262126.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AB11_RS08770;product=universal stress protein UspE;protein_id=WP_001262126.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 97683 98435 . - . ID=gene-AB11_RS08775;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AB11_RS08775;old_locus_tag=AB11_1452 NZ_JHDH01000107.1 Protein Homology CDS 97683 98435 . - 0 ID=cds-WP_000611911.1;Parent=gene-AB11_RS08775;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AB11_RS08775;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 98630 99145 . - . ID=gene-AB11_RS08780;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AB11_RS08780;old_locus_tag=AB11_1453 NZ_JHDH01000107.1 Protein Homology CDS 98630 99145 . - 0 ID=cds-WP_000945011.1;Parent=gene-AB11_RS08780;Dbxref=GenBank:WP_000945011.1;Name=WP_000945011.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AB11_RS08780;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945011.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 99156 100682 . - . ID=gene-AB11_RS08785;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AB11_RS08785;old_locus_tag=AB11_1454 NZ_JHDH01000107.1 Protein Homology CDS 99156 100682 . - 0 ID=cds-WP_000062973.1;Parent=gene-AB11_RS08785;Dbxref=GenBank:WP_000062973.1;Name=WP_000062973.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AB11_RS08785;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062973.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 100719 102164 . - . ID=gene-AB11_RS08790;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AB11_RS08790;old_locus_tag=AB11_1455 NZ_JHDH01000107.1 Protein Homology CDS 100719 102164 . - 0 ID=cds-WP_001156451.1;Parent=gene-AB11_RS08790;Dbxref=GenBank:WP_001156451.1;Name=WP_001156451.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AB11_RS08790;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156451.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 102164 103474 . - . ID=gene-AB11_RS08795;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AB11_RS08795;old_locus_tag=AB11_1456 NZ_JHDH01000107.1 Protein Homology CDS 102164 103474 . - 0 ID=cds-WP_000444929.1;Parent=gene-AB11_RS08795;Dbxref=GenBank:WP_000444929.1;Name=WP_000444929.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AB11_RS08795;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_000444929.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 103650 104558 . + . ID=gene-AB11_RS08800;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AB11_RS08800;old_locus_tag=AB11_1457 NZ_JHDH01000107.1 Protein Homology CDS 103650 104558 . + 0 ID=cds-WP_000885454.1;Parent=gene-AB11_RS08800;Dbxref=GenBank:WP_000885454.1;Name=WP_000885454.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AB11_RS08800;product=LysR family transcriptional regulator;protein_id=WP_000885454.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 104888 105451 . + . ID=gene-AB11_RS08805;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AB11_RS08805;old_locus_tag=AB11_1458 NZ_JHDH01000107.1 Protein Homology CDS 104888 105451 . + 0 ID=cds-WP_001046829.1;Parent=gene-AB11_RS08805;Dbxref=GenBank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AB11_RS08805;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 105472 106704 . - . ID=gene-AB11_RS08810;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AB11_RS08810;old_locus_tag=AB11_1459 NZ_JHDH01000107.1 Protein Homology CDS 105472 106704 . - 0 ID=cds-WP_000628058.1;Parent=gene-AB11_RS08810;Dbxref=GenBank:WP_000628058.1;Name=WP_000628058.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415857.2;locus_tag=AB11_RS08810;product=diguanylate cyclase DgcM;protein_id=WP_000628058.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 106898 106945 . + . ID=gene-AB11_RS25310;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AB11_RS25310 NZ_JHDH01000107.1 Protein Homology CDS 106898 106945 . + 0 ID=cds-WP_211180494.1;Parent=gene-AB11_RS25310;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AB11_RS25310;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 106959 107942 . + . ID=gene-AB11_RS08815;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AB11_RS08815;old_locus_tag=AB11_1460 NZ_JHDH01000107.1 Protein Homology CDS 106959 107942 . + 0 ID=cds-WP_000387388.1;Parent=gene-AB11_RS08815;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AB11_RS08815;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 108217 108390 . + . ID=gene-AB11_RS25750;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AB11_RS25750 NZ_JHDH01000107.1 Protein Homology CDS 108217 108390 . + 0 ID=cds-WP_001296046.1;Parent=gene-AB11_RS25750;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AB11_RS25750;product=proline-rich small protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 108420 109793 . + . ID=gene-AB11_RS08820;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AB11_RS08820;old_locus_tag=AB11_1461 NZ_JHDH01000107.1 Protein Homology CDS 108420 109793 . + 0 ID=cds-WP_000123737.1;Parent=gene-AB11_RS08820;Dbxref=GenBank:WP_000123737.1;Name=WP_000123737.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=AB11_RS08820;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123737.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 109922 110857 . - . ID=gene-AB11_RS08825;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AB11_RS08825;old_locus_tag=AB11_1462 NZ_JHDH01000107.1 Protein Homology CDS 109922 110857 . - 0 ID=cds-WP_000081417.1;Parent=gene-AB11_RS08825;Dbxref=GenBank:WP_000081417.1;Name=WP_000081417.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707683.1;locus_tag=AB11_RS08825;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_000081417.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 111034 111468 . - . ID=gene-AB11_RS08830;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AB11_RS08830;old_locus_tag=AB11_1463 NZ_JHDH01000107.1 Protein Homology CDS 111034 111468 . - 0 ID=cds-WP_001300461.1;Parent=gene-AB11_RS08830;Dbxref=GenBank:WP_001300461.1;Name=WP_001300461.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415894.4;locus_tag=AB11_RS08830;product=universal stress protein UspF;protein_id=WP_001300461.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 111609 112742 . - . ID=gene-AB11_RS08835;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AB11_RS08835;old_locus_tag=AB11_1464 NZ_JHDH01000107.1 Protein Homology CDS 111609 112742 . - 0 ID=cds-WP_000837921.1;Parent=gene-AB11_RS08835;Dbxref=GenBank:WP_000837921.1;Name=WP_000837921.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AB11_RS08835;product=porin OmpN;protein_id=WP_000837921.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 113109 116633 . - . ID=gene-AB11_RS08840;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AB11_RS08840;old_locus_tag=AB11_1465 NZ_JHDH01000107.1 Protein Homology CDS 113109 116633 . - 0 ID=cds-WP_000628243.1;Parent=gene-AB11_RS08840;Dbxref=GenBank:WP_000628243.1;Name=WP_000628243.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=AB11_RS08840;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_000628243.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 116907 117173 . + . ID=gene-AB11_RS08845;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AB11_RS08845 NZ_JHDH01000107.1 Protein Homology CDS 116907 117173 . + 0 ID=cds-WP_001295715.1;Parent=gene-AB11_RS08845;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AB11_RS08845;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 117170 117592 . - . ID=gene-AB11_RS08850;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AB11_RS08850;old_locus_tag=AB11_1467 NZ_JHDH01000107.1 Protein Homology CDS 117170 117592 . - 0 ID=cds-WP_001298828.1;Parent=gene-AB11_RS08850;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AB11_RS08850;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 117703 118692 . - . ID=gene-AB11_RS08855;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AB11_RS08855;old_locus_tag=AB11_1468 NZ_JHDH01000107.1 Protein Homology CDS 117703 118692 . - 0 ID=cds-WP_000762236.1;Parent=gene-AB11_RS08855;Dbxref=GenBank:WP_000762236.1;Name=WP_000762236.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415898.1;locus_tag=AB11_RS08855;product=D-lactate dehydrogenase;protein_id=WP_000762236.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 118900 121539 . + . ID=gene-AB11_RS08860;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AB11_RS08860;old_locus_tag=AB11_1469 NZ_JHDH01000107.1 Protein Homology CDS 118900 121539 . + 0 ID=cds-WP_000900941.1;Parent=gene-AB11_RS08860;Dbxref=GenBank:WP_000900941.1;Name=WP_000900941.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AB11_RS08860;product=YdbH family protein;protein_id=WP_000900941.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 121536 121721 . + . ID=gene-AB11_RS08865;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AB11_RS08865;old_locus_tag=AB11_1470 NZ_JHDH01000107.1 Protein Homology CDS 121536 121721 . + 0 ID=cds-WP_000698145.1;Parent=gene-AB11_RS08865;Dbxref=GenBank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AB11_RS08865;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_JHDH01000107.1 RefSeq gene 121729 122055 . + . ID=gene-AB11_RS08870;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;locus_tag=AB11_RS08870;old_locus_tag=AB11_1471 NZ_JHDH01000107.1 Protein Homology CDS 121729 122055 . + 0 ID=cds-WP_001300734.1;Parent=gene-AB11_RS08870;Dbxref=GenBank:WP_001300734.1;Name=WP_001300734.1;gbkey=CDS;gene=ydbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415901.2;locus_tag=AB11_RS08870;product=YdbL family protein;protein_id=WP_001300734.1;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 122227 122493 . - . ID=gene-AB11_RS08875;Name=AB11_RS08875;end_range=122493,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08875;old_locus_tag=AB11_1472;partial=true;pseudo=true NZ_JHDH01000107.1 Protein Homology CDS 122227 122493 . - 0 ID=cds-AB11_RS08875;Parent=gene-AB11_RS08875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=122493,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AB11_RS08875;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000107.1 RefSeq pseudogene 122560 122950 . + . ID=gene-AB11_RS08880;Name=AB11_RS08880;end_range=122950,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08880;old_locus_tag=AB11_1473;partial=true;pseudo=true NZ_JHDH01000107.1 Protein Homology CDS 122560 122950 . + 0 ID=cds-AB11_RS08880;Parent=gene-AB11_RS08880;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=122950,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS08880;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000108.1 1 22573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000108.1 RefSeq region 1 22573 . + . ID=NZ_JHDH01000108.1:1..22573;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000108.1 RefSeq pseudogene 1 594 . + . ID=gene-AB11_RS08885;Name=AB11_RS08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08885;old_locus_tag=AB11_1474;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000108.1 Protein Homology CDS 1 594 . + 0 ID=cds-AB11_RS08885;Parent=gene-AB11_RS08885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS08885;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000108.1 RefSeq pseudogene 565 1265 . - . ID=gene-AB11_RS08890;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=pseudogene;locus_tag=AB11_RS08890;old_locus_tag=AB11_1475;partial=true;pseudo=true;start_range=.,565 NZ_JHDH01000108.1 Protein Homology CDS 565 1265 . - 0 ID=cds-AB11_RS08890;Parent=gene-AB11_RS08890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AB11_RS08890;partial=true;product=transcriptional regulator FeaR;pseudo=true;start_range=.,565;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 1501 3000 . + . ID=gene-AB11_RS08895;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=maoB,padA;locus_tag=AB11_RS08895;old_locus_tag=AB11_1476 NZ_JHDH01000108.1 Protein Homology CDS 1501 3000 . + 0 ID=cds-WP_000138615.1;Parent=gene-AB11_RS08895;Dbxref=GenBank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;gene=feaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=AB11_RS08895;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 3058 5331 . - . ID=gene-AB11_RS08900;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=AB11_RS08900;old_locus_tag=AB11_1477 NZ_JHDH01000108.1 Protein Homology CDS 3058 5331 . - 0 ID=cds-WP_000535469.1;Parent=gene-AB11_RS08900;Dbxref=GenBank:WP_000535469.1;Name=WP_000535469.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary methylamine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=AB11_RS08900;product=primary-amine oxidase;protein_id=WP_000535469.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 5579 7624 . - . ID=gene-AB11_RS08905;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=AB11_RS08905;old_locus_tag=AB11_1479 NZ_JHDH01000108.1 Protein Homology CDS 5579 7624 . - 0 ID=cds-WP_001186469.1;Parent=gene-AB11_RS08905;Dbxref=GenBank:WP_001186469.1;Name=WP_001186469.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=AB11_RS08905;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_001186469.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 7909 8838 . + . ID=gene-AB11_RS08910;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=AB11_RS08910;old_locus_tag=AB11_1480 NZ_JHDH01000108.1 Protein Homology CDS 7909 8838 . + 0 ID=cds-WP_032223263.1;Parent=gene-AB11_RS08910;Dbxref=GenBank:WP_032223263.1;Name=WP_032223263.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=AB11_RS08910;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_032223263.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 8850 9137 . + . ID=gene-AB11_RS08915;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AB11_RS08915;old_locus_tag=AB11_1481 NZ_JHDH01000108.1 Protein Homology CDS 8850 9137 . + 0 ID=cds-WP_000073393.1;Parent=gene-AB11_RS08915;Dbxref=GenBank:WP_000073393.1;Name=WP_000073393.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=AB11_RS08915;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_000073393.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 9146 9892 . + . ID=gene-AB11_RS08920;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AB11_RS08920;old_locus_tag=AB11_1482 NZ_JHDH01000108.1 Protein Homology CDS 9146 9892 . + 0 ID=cds-WP_001072837.1;Parent=gene-AB11_RS08920;Dbxref=GenBank:WP_001072837.1;Name=WP_001072837.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=AB11_RS08920;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_001072837.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 9907 10404 . + . ID=gene-AB11_RS08925;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=AB11_RS08925;old_locus_tag=AB11_1483 NZ_JHDH01000108.1 Protein Homology CDS 9907 10404 . + 0 ID=cds-WP_001189201.1;Parent=gene-AB11_RS08925;Dbxref=GenBank:WP_001189201.1;Name=WP_001189201.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=AB11_RS08925;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_001189201.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 10412 11482 . + . ID=gene-AB11_RS08930;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=AB11_RS08930;old_locus_tag=AB11_1484 NZ_JHDH01000108.1 Protein Homology CDS 10412 11482 . + 0 ID=cds-WP_000206388.1;Parent=gene-AB11_RS08930;Dbxref=GenBank:WP_000206388.1;Name=WP_000206388.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=AB11_RS08930;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_000206388.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 11479 12246 . + . ID=gene-AB11_RS08935;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=AB11_RS08935;old_locus_tag=AB11_1485 NZ_JHDH01000108.1 Protein Homology CDS 11479 12246 . + 0 ID=cds-WP_001292353.1;Parent=gene-AB11_RS08935;Dbxref=GenBank:WP_001292353.1;Name=WP_001292353.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=AB11_RS08935;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_001292353.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 12246 13034 . + . ID=gene-AB11_RS08940;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=AB11_RS08940;old_locus_tag=AB11_1486 NZ_JHDH01000108.1 Protein Homology CDS 12246 13034 . + 0 ID=cds-WP_000969784.1;Parent=gene-AB11_RS08940;Dbxref=GenBank:WP_000969784.1;Name=WP_000969784.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=AB11_RS08940;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_000969784.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 13036 14463 . + . ID=gene-AB11_RS08945;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;locus_tag=AB11_RS08945;old_locus_tag=AB11_1487 NZ_JHDH01000108.1 Protein Homology CDS 13036 14463 . + 0 ID=cds-WP_000973360.1;Parent=gene-AB11_RS08945;Dbxref=GenBank:WP_000973360.1;Name=WP_000973360.1;Ontology_term=GO:0010124,GO:0008691;gbkey=CDS;gene=paaH;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415913.1;locus_tag=AB11_RS08945;product=3-hydroxyacyl-CoA dehydrogenase PaaH;protein_id=WP_000973360.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 14453 14875 . + . ID=gene-AB11_RS08950;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=AB11_RS08950;old_locus_tag=AB11_1488 NZ_JHDH01000108.1 Protein Homology CDS 14453 14875 . + 0 ID=cds-WP_000018413.1;Parent=gene-AB11_RS08950;Dbxref=GenBank:WP_000018413.1;Name=WP_000018413.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=AB11_RS08950;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 14875 16080 . + . ID=gene-AB11_RS08955;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=paaE,ydbW;locus_tag=AB11_RS08955;old_locus_tag=AB11_1489 NZ_JHDH01000108.1 Protein Homology CDS 14875 16080 . + 0 ID=cds-WP_001206197.1;Parent=gene-AB11_RS08955;Dbxref=GenBank:WP_001206197.1;Name=WP_001206197.1;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=AB11_RS08955;product=bifunctional 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206197.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 16107 17420 . + . ID=gene-AB11_RS08960;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=AB11_RS08960;old_locus_tag=AB11_1490 NZ_JHDH01000108.1 Protein Homology CDS 16107 17420 . + 0 ID=cds-WP_000632280.1;Parent=gene-AB11_RS08960;Dbxref=GenBank:WP_000632280.1;Name=WP_000632280.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=AB11_RS08960;product=phenylacetate--CoA ligase PaaK;protein_id=WP_000632280.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 17521 18471 . + . ID=gene-AB11_RS08965;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=AB11_RS08965;old_locus_tag=AB11_1491 NZ_JHDH01000108.1 Protein Homology CDS 17521 18471 . + 0 ID=cds-WP_000039887.1;Parent=gene-AB11_RS08965;Dbxref=GenBank:WP_000039887.1;Name=WP_000039887.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=AB11_RS08965;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_000039887.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 18453 19043 . + . ID=gene-AB11_RS08970;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=AB11_RS08970;old_locus_tag=AB11_1492 NZ_JHDH01000108.1 Protein Homology CDS 18453 19043 . + 0 ID=cds-WP_001123464.1;Parent=gene-AB11_RS08970;Dbxref=GenBank:WP_001123464.1;Name=WP_001123464.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=AB11_RS08970;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123464.1;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 19147 19212 . - . ID=gene-AB11_RS08975;Name=AB11_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08975 NZ_JHDH01000108.1 Protein Homology CDS 19147 19212 . - 0 ID=cds-WP_010723099.1;Parent=gene-AB11_RS08975;Dbxref=GenBank:WP_010723099.1;Name=WP_010723099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791240.1;locus_tag=AB11_RS08975;product=hypothetical protein;protein_id=WP_010723099.1;transl_table=11 NZ_JHDH01000108.1 RefSeq pseudogene 19374 22091 . + . ID=gene-AB11_RS08980;Name=AB11_RS08980;end_range=22091,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08980;old_locus_tag=AB11_1493;partial=true;pseudo=true NZ_JHDH01000108.1 Protein Homology CDS 19374 22091 . + 0 ID=cds-AB11_RS08980;Parent=gene-AB11_RS08980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22091,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AB11_RS08980;partial=true;product=beta strand repeat-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000108.1 RefSeq gene 22102 22573 . - . ID=gene-AB11_RS08985;Name=AB11_RS08985;end_range=22573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08985;partial=true NZ_JHDH01000108.1 Protein Homology CDS 22102 22573 . - 1 ID=cds-WP_001352965.1;Parent=gene-AB11_RS08985;Dbxref=GenBank:WP_001352965.1;Name=WP_001352965.1;end_range=22573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS08985;partial=true;product=IS3 family transposase;protein_id=WP_001352965.1;transl_table=11 ##sequence-region NZ_JHDH01000109.1 1 2475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000109.1 RefSeq region 1 2475 . + . ID=NZ_JHDH01000109.1:1..2475;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000109.1 RefSeq gene 1 244 . - . ID=gene-AB11_RS08990;Name=AB11_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS08990;old_locus_tag=AB11_1494;partial=true;start_range=.,1 NZ_JHDH01000109.1 Protein Homology CDS 1 244 . - 0 ID=cds-WP_000567704.1;Parent=gene-AB11_RS08990;Dbxref=GenBank:WP_000567704.1;Name=WP_000567704.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS08990;partial=true;product=transposase;protein_id=WP_000567704.1;start_range=.,1;transl_table=11 NZ_JHDH01000109.1 RefSeq pseudogene 324 1289 . + . ID=gene-AB11_RS08995;Name=AB11_RS08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS08995;old_locus_tag=AB11_1495;partial=true;pseudo=true;start_range=.,324 NZ_JHDH01000109.1 Protein Homology CDS 324 1289 . + 0 ID=cds-AB11_RS08995;Parent=gene-AB11_RS08995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AB11_RS08995;partial=true;product=autotransporter domain-containing protein;pseudo=true;start_range=.,324;transl_table=11 NZ_JHDH01000109.1 RefSeq gene 1316 2436 . - . ID=gene-AB11_RS09000;Name=AB11_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09000;old_locus_tag=AB11_1496 NZ_JHDH01000109.1 Protein Homology CDS 2178 2436 . - 0 ID=cds-WP_087451024.1;Parent=gene-AB11_RS09000;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS09000;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000109.1 Protein Homology CDS 1316 2178 . - 2 ID=cds-WP_087451024.1;Parent=gene-AB11_RS09000;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS09000;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 ##sequence-region NZ_JHDH01000110.1 1 23227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000110.1 RefSeq region 1 23227 . + . ID=NZ_JHDH01000110.1:1..23227;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000110.1 RefSeq gene 5 1125 . - . ID=gene-AB11_RS09005;Name=AB11_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09005;old_locus_tag=AB11_1498 NZ_JHDH01000110.1 Protein Homology CDS 867 1125 . - 0 ID=cds-WP_113706273.1;Parent=gene-AB11_RS09005;Dbxref=GenBank:WP_113706273.1;Name=WP_113706273.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS09005;product=IS3-like element ISSen4 family transposase;protein_id=WP_113706273.1;transl_table=11 NZ_JHDH01000110.1 Protein Homology CDS 5 867 . - 2 ID=cds-WP_113706273.1;Parent=gene-AB11_RS09005;Dbxref=GenBank:WP_113706273.1;Name=WP_113706273.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS09005;product=IS3-like element ISSen4 family transposase;protein_id=WP_113706273.1;transl_table=11 NZ_JHDH01000110.1 RefSeq pseudogene 1195 3600 . + . ID=gene-AB11_RS09010;Name=AB11_RS09010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09010;old_locus_tag=AB11_1500;partial=true;pseudo=true;start_range=.,1195 NZ_JHDH01000110.1 Protein Homology CDS 1195 3600 . + 0 ID=cds-AB11_RS09010;Parent=gene-AB11_RS09010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AB11_RS09010;partial=true;product=autotransporter domain-containing protein;pseudo=true;start_range=.,1195;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 3808 4668 . + . ID=gene-AB11_RS09015;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AB11_RS09015;old_locus_tag=AB11_1502 NZ_JHDH01000110.1 Protein Homology CDS 3808 4668 . + 0 ID=cds-WP_000097801.1;Parent=gene-AB11_RS09015;Dbxref=GenBank:WP_000097801.1;Name=WP_000097801.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AB11_RS09015;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097801.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 4731 7037 . + . ID=gene-AB11_RS09020;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;locus_tag=AB11_RS09020;old_locus_tag=AB11_1503 NZ_JHDH01000110.1 Protein Homology CDS 4731 7037 . + 0 ID=cds-WP_000471510.1;Parent=gene-AB11_RS09020;Dbxref=GenBank:WP_000471510.1;Name=WP_000471510.1;gbkey=CDS;gene=ydbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AB11_RS09020;product=DUF2773 domain-containing bactofilin;protein_id=WP_000471510.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 7208 7813 . + . ID=gene-AB11_RS09025;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=AB11_RS09025;old_locus_tag=AB11_1504 NZ_JHDH01000110.1 Protein Homology CDS 7208 7813 . + 0 ID=cds-WP_000177515.1;Parent=gene-AB11_RS09025;Dbxref=GenBank:WP_000177515.1;Name=WP_000177515.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynbA;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415926.4;locus_tag=AB11_RS09025;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177515.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 7813 8709 . + . ID=gene-AB11_RS09030;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=AB11_RS09030;old_locus_tag=AB11_1505 NZ_JHDH01000110.1 Protein Homology CDS 7813 8709 . + 0 ID=cds-WP_000890941.1;Parent=gene-AB11_RS09030;Dbxref=GenBank:WP_000890941.1;Name=WP_000890941.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=ynbB;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AB11_RS09030;product=phosphatidate cytidylyltransferase;protein_id=WP_000890941.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 8725 10482 . + . ID=gene-AB11_RS09035;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AB11_RS09035;old_locus_tag=AB11_1506 NZ_JHDH01000110.1 Protein Homology CDS 8725 10482 . + 0 ID=cds-WP_000431845.1;Parent=gene-AB11_RS09035;Dbxref=GenBank:WP_000431845.1;Name=WP_000431845.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415928.1;locus_tag=AB11_RS09035;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_000431845.1;transl_table=11 NZ_JHDH01000110.1 RefSeq pseudogene 10496 11788 . + . ID=gene-AB11_RS09040;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=pseudogene;locus_tag=AB11_RS09040;pseudo=true NZ_JHDH01000110.1 Protein Homology CDS 10496 11788 . + 0 ID=cds-AB11_RS09040;Parent=gene-AB11_RS09040;Note=internal stop;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415929.1;locus_tag=AB11_RS09040;product=phosphatase PAP2/dual specificity phosphatase family protein;pseudo=true;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 11842 12447 . - . ID=gene-AB11_RS09045;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AB11_RS09045;old_locus_tag=AB11_1509 NZ_JHDH01000110.1 Protein Homology CDS 11842 12447 . - 0 ID=cds-WP_000048950.1;Parent=gene-AB11_RS09045;Dbxref=GenBank:WP_000048950.1;Name=WP_000048950.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415930.1;locus_tag=AB11_RS09045;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048950.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 12648 16550 . + . ID=gene-AB11_RS09050;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AB11_RS09050;old_locus_tag=AB11_1510 NZ_JHDH01000110.1 Protein Homology CDS 12648 16550 . + 0 ID=cds-WP_000139543.1;Parent=gene-AB11_RS09050;Dbxref=GenBank:WP_000139543.1;Name=WP_000139543.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AB11_RS09050;product=ATP-dependent RNA helicase HrpA;protein_id=WP_000139543.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 16822 17622 . + . ID=gene-AB11_RS09055;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AB11_RS09055;old_locus_tag=AB11_1511 NZ_JHDH01000110.1 Protein Homology CDS 16822 17622 . + 0 ID=cds-WP_001027942.1;Parent=gene-AB11_RS09055;Dbxref=GenBank:WP_001027942.1;Name=WP_001027942.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AB11_RS09055;product=DUF218 domain-containing protein YdcF;protein_id=WP_001027942.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 17819 19258 . + . ID=gene-AB11_RS09060;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AB11_RS09060;old_locus_tag=AB11_1512 NZ_JHDH01000110.1 Protein Homology CDS 17819 19258 . + 0 ID=cds-WP_032223278.1;Parent=gene-AB11_RS09060;Dbxref=GenBank:WP_032223278.1;Name=WP_032223278.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415933.1;locus_tag=AB11_RS09060;product=aldehyde dehydrogenase;protein_id=WP_032223278.1;transl_table=11 NZ_JHDH01000110.1 RefSeq pseudogene 19300 20300 . - . ID=gene-AB11_RS09065;Name=gap;gbkey=Gene;gene=gap;gene_biotype=pseudogene;locus_tag=AB11_RS09065;pseudo=true NZ_JHDH01000110.1 Protein Homology CDS 19300 20300 . - 0 ID=cds-AB11_RS09065;Parent=gene-AB11_RS09065;Note=frameshifted%3B internal stop;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AB11_RS09065;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 20489 21019 . + . ID=gene-AB11_RS09070;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AB11_RS09070;old_locus_tag=AB11_1516 NZ_JHDH01000110.1 Protein Homology CDS 20489 21019 . + 0 ID=cds-WP_001705065.1;Parent=gene-AB11_RS09070;Dbxref=GenBank:WP_001705065.1;Name=WP_001705065.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AB11_RS09070;product=cytochrome b561;protein_id=WP_001705065.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 21264 21437 . + . ID=gene-AB11_RS09075;Name=ydcA;gbkey=Gene;gene=ydcA;gene_biotype=protein_coding;locus_tag=AB11_RS09075;old_locus_tag=AB11_1517 NZ_JHDH01000110.1 Protein Homology CDS 21264 21437 . + 0 ID=cds-WP_000731833.1;Parent=gene-AB11_RS09075;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;gene=ydcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AB11_RS09075;product=YdcA family protein;protein_id=WP_000731833.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 21463 21531 . + . ID=gene-AB11_RS25315;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AB11_RS25315 NZ_JHDH01000110.1 Protein Homology CDS 21463 21531 . + 0 ID=cds-WP_211180495.1;Parent=gene-AB11_RS25315;Dbxref=GenBank:WP_211180495.1;Name=WP_211180495.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AB11_RS25315;product=protein YncP;protein_id=WP_211180495.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 21509 21658 . - . ID=gene-AB11_RS09080;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AB11_RS09080 NZ_JHDH01000110.1 Protein Homology CDS 21509 21658 . - 0 ID=cds-WP_001320773.1;Parent=gene-AB11_RS09080;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AB11_RS09080;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JHDH01000110.1 RefSeq gene 21827 23196 . - . ID=gene-AB11_RS09085;Name=AB11_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09085 NZ_JHDH01000110.1 Protein Homology CDS 22716 23196 . - 0 ID=cds-WP_085947770.1;Parent=gene-AB11_RS09085;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS09085;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDH01000110.1 Protein Homology CDS 21827 22716 . - 2 ID=cds-WP_085947770.1;Parent=gene-AB11_RS09085;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS09085;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 ##sequence-region NZ_JHDH01000111.1 1 27347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000111.1 RefSeq region 1 27347 . + . ID=NZ_JHDH01000111.1:1..27347;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000111.1 RefSeq pseudogene 1 456 . - . ID=gene-AB11_RS09090;Name=AB11_RS09090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09090;old_locus_tag=AB11_1520;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000111.1 Protein Homology CDS 1 456 . - 0 ID=cds-AB11_RS09090;Parent=gene-AB11_RS09090;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AB11_RS09090;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 558 1355 . + . ID=gene-AB11_RS09095;Name=ybcM;gbkey=Gene;gene=ybcM;gene_biotype=protein_coding;locus_tag=AB11_RS09095;old_locus_tag=AB11_1521 NZ_JHDH01000111.1 Protein Homology CDS 558 1355 . + 0 ID=cds-WP_000879833.1;Parent=gene-AB11_RS09095;Dbxref=GenBank:WP_000879833.1;Name=WP_000879833.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ybcM;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=AB11_RS09095;product=helix-turn-helix transcriptional regulator;protein_id=WP_000879833.1;transl_table=11 NZ_JHDH01000111.1 RefSeq pseudogene 2309 2740 . - . ID=gene-AB11_RS09100;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AB11_RS09100;pseudo=true NZ_JHDH01000111.1 Protein Homology CDS 2309 2740 . - 0 ID=cds-AB11_RS09100;Parent=gene-AB11_RS09100;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AB11_RS09100;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 2748 3956 . + . ID=gene-AB11_RS09105;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=AB11_RS09105;old_locus_tag=AB11_1523 NZ_JHDH01000111.1 Protein Homology CDS 2748 3956 . + 0 ID=cds-WP_071996224.1;Parent=gene-AB11_RS09105;Dbxref=GenBank:WP_071996224.1;Name=WP_071996224.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;gene=insQ;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AB11_RS09105;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_071996224.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 3996 5210 . - . ID=gene-AB11_RS09110;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AB11_RS09110;old_locus_tag=AB11_1524 NZ_JHDH01000111.1 Protein Homology CDS 3996 5210 . - 0 ID=cds-WP_071703446.1;Parent=gene-AB11_RS09110;Dbxref=GenBank:WP_071703446.1;Name=WP_071703446.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AB11_RS09110;product=BenE family transporter YdcO;protein_id=WP_071703446.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 5263 5799 . + . ID=gene-AB11_RS09115;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AB11_RS09115;old_locus_tag=AB11_1525 NZ_JHDH01000111.1 Protein Homology CDS 5263 5799 . + 0 ID=cds-WP_000429155.1;Parent=gene-AB11_RS09115;Dbxref=GenBank:WP_000429155.1;Name=WP_000429155.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AB11_RS09115;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429155.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 5872 7833 . + . ID=gene-AB11_RS09120;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AB11_RS09120;old_locus_tag=AB11_1526 NZ_JHDH01000111.1 Protein Homology CDS 5872 7833 . + 0 ID=cds-WP_001303492.1;Parent=gene-AB11_RS09120;Dbxref=GenBank:WP_001303492.1;Name=WP_001303492.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AB11_RS09120;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001303492.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 7925 8155 . - . ID=gene-AB11_RS09125;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AB11_RS09125;old_locus_tag=AB11_1527 NZ_JHDH01000111.1 Protein Homology CDS 7925 8155 . - 0 ID=cds-WP_000494244.1;Parent=gene-AB11_RS09125;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AB11_RS09125;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 8377 8553 . + . ID=gene-AB11_RS09130;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AB11_RS09130 NZ_JHDH01000111.1 Protein Homology CDS 8377 8553 . + 0 ID=cds-WP_000813794.1;Parent=gene-AB11_RS09130;Dbxref=GenBank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AB11_RS09130;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813794.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 8599 9015 . + . ID=gene-AB11_RS09135;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AB11_RS09135;old_locus_tag=AB11_1529 NZ_JHDH01000111.1 Protein Homology CDS 8599 9015 . + 0 ID=cds-WP_001270286.1;Parent=gene-AB11_RS09135;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AB11_RS09135;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 9094 10500 . + . ID=gene-AB11_RS09140;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AB11_RS09140;old_locus_tag=AB11_1530 NZ_JHDH01000111.1 Protein Homology CDS 9094 10500 . + 0 ID=cds-WP_000760626.1;Parent=gene-AB11_RS09140;Dbxref=GenBank:WP_000760626.1;Name=WP_000760626.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AB11_RS09140;product=aminotransferase-like domain-containing protein;protein_id=WP_000760626.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 10745 11890 . + . ID=gene-AB11_RS09145;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AB11_RS09145;old_locus_tag=AB11_1531 NZ_JHDH01000111.1 Protein Homology CDS 10745 11890 . + 0 ID=cds-WP_000047424.1;Parent=gene-AB11_RS09145;Dbxref=GenBank:WP_000047424.1;Name=WP_000047424.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AB11_RS09145;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_000047424.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 11908 12921 . + . ID=gene-AB11_RS09150;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AB11_RS09150;old_locus_tag=AB11_1532 NZ_JHDH01000111.1 Protein Homology CDS 11908 12921 . + 0 ID=cds-WP_032223289.1;Parent=gene-AB11_RS09150;Dbxref=GenBank:WP_032223289.1;Name=WP_032223289.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AB11_RS09150;product=ABC transporter ATP-binding protein;protein_id=WP_032223289.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 12922 13863 . + . ID=gene-AB11_RS09155;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AB11_RS09155;old_locus_tag=AB11_1533 NZ_JHDH01000111.1 Protein Homology CDS 12922 13863 . + 0 ID=cds-WP_001251304.1;Parent=gene-AB11_RS09155;Dbxref=GenBank:WP_001251304.1;Name=WP_001251304.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415959.1;locus_tag=AB11_RS09155;product=ABC transporter permease;protein_id=WP_001251304.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 13853 14647 . + . ID=gene-AB11_RS09160;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AB11_RS09160;old_locus_tag=AB11_1534 NZ_JHDH01000111.1 Protein Homology CDS 13853 14647 . + 0 ID=cds-WP_000555458.1;Parent=gene-AB11_RS09160;Dbxref=GenBank:WP_000555458.1;Name=WP_000555458.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AB11_RS09160;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 14669 16093 . + . ID=gene-AB11_RS09165;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AB11_RS09165;old_locus_tag=AB11_1535 NZ_JHDH01000111.1 Protein Homology CDS 14669 16093 . + 0 ID=cds-WP_001163875.1;Parent=gene-AB11_RS09165;Dbxref=GenBank:WP_001163875.1;Name=WP_001163875.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=AB11_RS09165;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163875.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 16190 16285 . - . ID=gene-AB11_RS09170;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AB11_RS09170 NZ_JHDH01000111.1 Protein Homology CDS 16190 16285 . - 0 ID=cds-WP_001310798.1;Parent=gene-AB11_RS09170;Dbxref=GenBank:WP_001310798.1;Name=WP_001310798.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AB11_RS09170;product=stress response membrane protein YncL;protein_id=WP_001310798.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 16480 16653 . + . ID=gene-AB11_RS09175;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AB11_RS09175;old_locus_tag=AB11_1536 NZ_JHDH01000111.1 Protein Homology CDS 16480 16653 . + 0 ID=cds-WP_000061178.1;Parent=gene-AB11_RS09175;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AB11_RS09175;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 16739 16972 . + . ID=gene-AB11_RS09180;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AB11_RS09180;old_locus_tag=AB11_1537 NZ_JHDH01000111.1 Protein Homology CDS 16739 16972 . + 0 ID=cds-WP_000018633.1;Parent=gene-AB11_RS09180;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AB11_RS09180;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 16973 17422 . - . ID=gene-AB11_RS09185;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AB11_RS09185;old_locus_tag=AB11_1538 NZ_JHDH01000111.1 Protein Homology CDS 16973 17422 . - 0 ID=cds-WP_001076535.1;Parent=gene-AB11_RS09185;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AB11_RS09185;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 17419 17937 . - . ID=gene-AB11_RS09190;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AB11_RS09190;old_locus_tag=AB11_1539 NZ_JHDH01000111.1 Protein Homology CDS 17419 17937 . - 0 ID=cds-WP_001310799.1;Parent=gene-AB11_RS09190;Dbxref=GenBank:WP_001310799.1;Name=WP_001310799.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415965.1;locus_tag=AB11_RS09190;product=GNAT family N-acetyltransferase;protein_id=WP_001310799.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 18118 19155 . + . ID=gene-AB11_RS09195;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AB11_RS09195;old_locus_tag=AB11_1540 NZ_JHDH01000111.1 Protein Homology CDS 18118 19155 . + 0 ID=cds-WP_000531462.1;Parent=gene-AB11_RS09195;Dbxref=GenBank:WP_000531462.1;Name=WP_000531462.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AB11_RS09195;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_000531462.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 19353 20018 . + . ID=gene-AB11_RS09200;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=AB11_RS09200;old_locus_tag=AB11_1541 NZ_JHDH01000111.1 Protein Homology CDS 19353 20018 . + 0 ID=cds-WP_001300742.1;Parent=gene-AB11_RS09200;Dbxref=GenBank:WP_001300742.1;Name=WP_001300742.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AB11_RS09200;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001300742.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 20054 22156 . - . ID=gene-AB11_RS09205;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AB11_RS09205;old_locus_tag=AB11_1542 NZ_JHDH01000111.1 Protein Homology CDS 20054 22156 . - 0 ID=cds-WP_000689363.1;Parent=gene-AB11_RS09205;Dbxref=GenBank:WP_000689363.1;Name=WP_000689363.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AB11_RS09205;product=TonB-dependent receptor PqqU;protein_id=WP_000689363.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 22398 23459 . + . ID=gene-AB11_RS09210;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AB11_RS09210;old_locus_tag=AB11_1543 NZ_JHDH01000111.1 Protein Homology CDS 22398 23459 . + 0 ID=cds-WP_000550695.1;Parent=gene-AB11_RS09210;Dbxref=GenBank:WP_000550695.1;Name=WP_000550695.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415969.1;locus_tag=AB11_RS09210;product=7-bladed beta-propeller protein YncE;protein_id=WP_000550695.1;transl_table=11 NZ_JHDH01000111.1 RefSeq pseudogene 23572 25070 . - . ID=gene-AB11_RS09215;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=pseudogene;locus_tag=AB11_RS09215;old_locus_tag=AB11_1544;pseudo=true NZ_JHDH01000111.1 Protein Homology CDS 23572 25070 . - 0 ID=cds-AB11_RS09215;Parent=gene-AB11_RS09215;Note=frameshifted;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AB11_RS09215;product=L-asparagine permease;pseudo=true;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 25337 25954 . + . ID=gene-AB11_RS09220;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AB11_RS09220 NZ_JHDH01000111.1 Protein Homology CDS 25337 25954 . + 0 ID=cds-WP_000598857.1;Parent=gene-AB11_RS09220;Dbxref=GenBank:WP_000598857.1;Name=WP_000598857.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AB11_RS09220;product=glutathione S-transferase family protein;protein_id=WP_000598857.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 26030 26242 . + . ID=gene-AB11_RS09225;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AB11_RS09225;old_locus_tag=AB11_1548 NZ_JHDH01000111.1 Protein Homology CDS 26030 26242 . + 0 ID=cds-WP_000226995.1;Parent=gene-AB11_RS09225;Dbxref=GenBank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AB11_RS09225;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11 NZ_JHDH01000111.1 RefSeq gene 27062 27347 . + . ID=gene-AB11_RS09230;Name=AB11_RS09230;end_range=27347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09230;old_locus_tag=AB11_1549;partial=true NZ_JHDH01000111.1 Protein Homology CDS 27062 27347 . + 0 ID=cds-WP_000103171.1;Parent=gene-AB11_RS09230;Dbxref=GenBank:WP_000103171.1;Name=WP_000103171.1;end_range=27347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AB11_RS09230;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_000103171.1;transl_table=11 ##sequence-region NZ_JHDH01000112.1 1 40369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000112.1 RefSeq region 1 40369 . + . ID=NZ_JHDH01000112.1:1..40369;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000112.1 RefSeq pseudogene 7 243 . + . ID=gene-AB11_RS09235;Name=AB11_RS09235;end_range=243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09235;old_locus_tag=AB11_1550;partial=true;pseudo=true NZ_JHDH01000112.1 Protein Homology CDS 7 243 . + 0 ID=cds-AB11_RS09235;Parent=gene-AB11_RS09235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS09235;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000112.1 RefSeq pseudogene 387 1523 . + . ID=gene-AB11_RS09240;Name=ydcC;gbkey=Gene;gene=ydcC;gene_biotype=pseudogene;locus_tag=AB11_RS09240;old_locus_tag=AB11_1551;pseudo=true NZ_JHDH01000112.1 Protein Homology CDS 387 1523 . + 0 ID=cds-AB11_RS09240;Parent=gene-AB11_RS09240;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=ydcC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AB11_RS09240;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 1623 1856 . + . ID=gene-AB11_RS09245;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AB11_RS09245;old_locus_tag=AB11_1552 NZ_JHDH01000112.1 Protein Homology CDS 1623 1856 . + 0 ID=cds-WP_001120143.1;Parent=gene-AB11_RS09245;Dbxref=GenBank:WP_001120143.1;Name=WP_001120143.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415978.1;locus_tag=AB11_RS09245;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 1853 2422 . - . ID=gene-AB11_RS09250;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AB11_RS09250;old_locus_tag=AB11_1553 NZ_JHDH01000112.1 Protein Homology CDS 1853 2422 . - 0 ID=cds-WP_000085899.1;Parent=gene-AB11_RS09250;Dbxref=GenBank:WP_000085899.1;Name=WP_000085899.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AB11_RS09250;product=flavin reductase family protein;protein_id=WP_000085899.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 2595 3440 . + . ID=gene-AB11_RS09255;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AB11_RS09255;old_locus_tag=AB11_1554 NZ_JHDH01000112.1 Protein Homology CDS 2595 3440 . + 0 ID=cds-WP_000187919.1;Parent=gene-AB11_RS09255;Dbxref=GenBank:WP_000187919.1;Name=WP_000187919.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AB11_RS09255;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187919.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 3536 4429 . - . ID=gene-AB11_RS09260;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AB11_RS09260;old_locus_tag=AB11_1555 NZ_JHDH01000112.1 Protein Homology CDS 3536 4429 . - 0 ID=cds-WP_000804381.1;Parent=gene-AB11_RS09260;Dbxref=GenBank:WP_000804381.1;Name=WP_000804381.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AB11_RS09260;product=PhzF family isomerase;protein_id=WP_000804381.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 4508 5188 . - . ID=gene-AB11_RS09265;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB11_RS09265;old_locus_tag=AB11_1556 NZ_JHDH01000112.1 Protein Homology CDS 4508 5188 . - 0 ID=cds-WP_000617116.1;Parent=gene-AB11_RS09265;Dbxref=GenBank:WP_000617116.1;Name=WP_000617116.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AB11_RS09265;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617116.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 5185 5880 . - . ID=gene-AB11_RS09270;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AB11_RS09270;old_locus_tag=AB11_1557 NZ_JHDH01000112.1 Protein Homology CDS 5185 5880 . - 0 ID=cds-WP_001166353.1;Parent=gene-AB11_RS09270;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AB11_RS09270;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 5880 7424 . - . ID=gene-AB11_RS09275;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB11_RS09275;old_locus_tag=AB11_1558 NZ_JHDH01000112.1 Protein Homology CDS 5880 7424 . - 0 ID=cds-WP_000702535.1;Parent=gene-AB11_RS09275;Dbxref=GenBank:WP_000702535.1;Name=WP_000702535.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415984.1;locus_tag=AB11_RS09275;product=nitrate reductase subunit beta;protein_id=WP_000702535.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 7421 11161 . - . ID=gene-AB11_RS09280;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AB11_RS09280;old_locus_tag=AB11_1559 NZ_JHDH01000112.1 Protein Homology CDS 7421 11161 . - 0 ID=cds-WP_000040462.1;Parent=gene-AB11_RS09280;Dbxref=GenBank:WP_000040462.1;Name=WP_000040462.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AB11_RS09280;product=nitrate reductase Z subunit alpha;protein_id=WP_000040462.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 11243 12631 . - . ID=gene-AB11_RS09285;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AB11_RS09285;old_locus_tag=AB11_1560 NZ_JHDH01000112.1 Protein Homology CDS 11243 12631 . - 0 ID=cds-WP_001207905.1;Parent=gene-AB11_RS09285;Dbxref=GenBank:WP_001207905.1;Name=WP_001207905.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AB11_RS09285;product=nitrate/nitrite transporter NarU;protein_id=WP_001207905.1;transl_table=11 NZ_JHDH01000112.1 RefSeq pseudogene 12955 14285 . - . ID=gene-AB11_RS09290;Name=AB11_RS09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09290;old_locus_tag=AB11_1561;pseudo=true NZ_JHDH01000112.1 Protein Homology CDS 12955 14285 . - 0 ID=cds-AB11_RS09290;Parent=gene-AB11_RS09290;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AB11_RS09290;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000112.1 RefSeq pseudogene 14324 14599 . - . ID=gene-AB11_RS09295;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AB11_RS09295;old_locus_tag=AB11_1562;partial=true;pseudo=true;start_range=.,14324 NZ_JHDH01000112.1 Protein Homology CDS 14324 14599 . - 0 ID=cds-AB11_RS09295;Parent=gene-AB11_RS09295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AB11_RS09295;partial=true;product=porin;pseudo=true;start_range=.,14324;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 14859 15740 . - . ID=gene-AB11_RS09300;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AB11_RS09300;old_locus_tag=AB11_1563 NZ_JHDH01000112.1 Protein Homology CDS 14859 15740 . - 0 ID=cds-WP_000198211.1;Parent=gene-AB11_RS09300;Dbxref=GenBank:WP_000198211.1;Name=WP_000198211.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AB11_RS09300;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198211.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 15972 19019 . + . ID=gene-AB11_RS09305;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB11_RS09305;old_locus_tag=AB11_1565 NZ_JHDH01000112.1 Protein Homology CDS 15972 19019 . + 0 ID=cds-WP_162751859.1;Parent=gene-AB11_RS09305;Dbxref=GenBank:WP_162751859.1;Name=WP_162751859.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AB11_RS09305;product=formate dehydrogenase-N subunit alpha;protein_id=WP_162751859.1;transl_except=(pos:16557..16559%2Caa:Sec);transl_table=11 NZ_JHDH01000112.1 RefSeq gene 19032 19916 . + . ID=gene-AB11_RS09310;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AB11_RS09310;old_locus_tag=AB11_1566 NZ_JHDH01000112.1 Protein Homology CDS 19032 19916 . + 0 ID=cds-WP_001391970.1;Parent=gene-AB11_RS09310;Dbxref=GenBank:WP_001391970.1;Name=WP_001391970.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AB11_RS09310;product=formate dehydrogenase N subunit beta;protein_id=WP_001391970.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 19909 20562 . + . ID=gene-AB11_RS09315;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AB11_RS09315;old_locus_tag=AB11_1567 NZ_JHDH01000112.1 Protein Homology CDS 19909 20562 . + 0 ID=cds-WP_000045648.1;Parent=gene-AB11_RS09315;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AB11_RS09315;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 20969 21253 . - . ID=gene-AB11_RS09320;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AB11_RS09320;old_locus_tag=AB11_1568 NZ_JHDH01000112.1 Protein Homology CDS 20969 21253 . - 0 ID=cds-WP_000781370.1-2;Parent=gene-AB11_RS09320;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AB11_RS09320;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 21399 22409 . - . ID=gene-AB11_RS09325;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AB11_RS09325;old_locus_tag=AB11_1569 NZ_JHDH01000112.1 Protein Homology CDS 21399 22409 . - 0 ID=cds-WP_001568846.1;Parent=gene-AB11_RS09325;Dbxref=GenBank:WP_001568846.1;Name=WP_001568846.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AB11_RS09325;product=alcohol dehydrogenase AdhP;protein_id=WP_001568846.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 22543 24240 . - . ID=gene-AB11_RS09330;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AB11_RS09330;old_locus_tag=AB11_1570 NZ_JHDH01000112.1 Protein Homology CDS 22543 24240 . - 0 ID=cds-WP_000433465.1;Parent=gene-AB11_RS09330;Dbxref=GenBank:WP_000433465.1;Name=WP_000433465.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=AB11_RS09330;product=malate dehydrogenase;protein_id=WP_000433465.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 24397 24534 . - . ID=gene-AB11_RS09335;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AB11_RS09335;old_locus_tag=AB11_1571 NZ_JHDH01000112.1 Protein Homology CDS 24397 24534 . - 0 ID=cds-WP_000841554.1;Parent=gene-AB11_RS09335;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AB11_RS09335;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 24636 24851 . - . ID=gene-AB11_RS09340;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AB11_RS09340;old_locus_tag=AB11_1572 NZ_JHDH01000112.1 Protein Homology CDS 24636 24851 . - 0 ID=cds-WP_000495771.1;Parent=gene-AB11_RS09340;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AB11_RS09340;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 25196 25627 . + . ID=gene-AB11_RS09345;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AB11_RS09345;old_locus_tag=AB11_1573 NZ_JHDH01000112.1 Protein Homology CDS 25196 25627 . + 0 ID=cds-WP_000152305.1;Parent=gene-AB11_RS09345;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AB11_RS09345;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 25683 26609 . - . ID=gene-AB11_RS09350;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AB11_RS09350;old_locus_tag=AB11_1574 NZ_JHDH01000112.1 Protein Homology CDS 25683 26609 . - 0 ID=cds-WP_032223297.1;Parent=gene-AB11_RS09350;Dbxref=GenBank:WP_032223297.1;Name=WP_032223297.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AB11_RS09350;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_032223297.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 26602 27588 . - . ID=gene-AB11_RS09355;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AB11_RS09355;old_locus_tag=AB11_1575 NZ_JHDH01000112.1 Protein Homology CDS 26602 27588 . - 0 ID=cds-WP_021570789.1;Parent=gene-AB11_RS09355;Dbxref=GenBank:WP_021570789.1;Name=WP_021570789.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AB11_RS09355;product=ABC transporter ATP-binding protein;protein_id=WP_021570789.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 27585 28481 . - . ID=gene-AB11_RS09360;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AB11_RS09360;old_locus_tag=AB11_1576 NZ_JHDH01000112.1 Protein Homology CDS 27585 28481 . - 0 ID=cds-WP_000979626.1;Parent=gene-AB11_RS09360;Dbxref=GenBank:WP_000979626.1;Name=WP_000979626.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416002.1;locus_tag=AB11_RS09360;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979626.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 28478 29500 . - . ID=gene-AB11_RS09365;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AB11_RS09365;old_locus_tag=AB11_1577 NZ_JHDH01000112.1 Protein Homology CDS 28478 29500 . - 0 ID=cds-WP_000145123.1;Parent=gene-AB11_RS09365;Dbxref=GenBank:WP_000145123.1;Name=WP_000145123.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AB11_RS09365;product=ABC transporter permease;protein_id=WP_000145123.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 29502 31052 . - . ID=gene-AB11_RS09370;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AB11_RS09370;old_locus_tag=AB11_1578 NZ_JHDH01000112.1 Protein Homology CDS 29502 31052 . - 0 ID=cds-WP_000830550.1;Parent=gene-AB11_RS09370;Dbxref=GenBank:WP_000830550.1;Name=WP_000830550.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416004.1;locus_tag=AB11_RS09370;product=ABC transporter substrate-binding protein;protein_id=WP_000830550.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 31066 31647 . - . ID=gene-AB11_RS09375;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AB11_RS09375;old_locus_tag=AB11_1579 NZ_JHDH01000112.1 Protein Homology CDS 31066 31647 . - 0 ID=cds-WP_001405192.1;Parent=gene-AB11_RS09375;Dbxref=GenBank:WP_001405192.1;Name=WP_001405192.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416005.1;locus_tag=AB11_RS09375;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001405192.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 31905 34304 . - . ID=gene-AB11_RS09380;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AB11_RS09380;old_locus_tag=AB11_1580 NZ_JHDH01000112.1 Protein Homology CDS 31905 34304 . - 0 ID=cds-WP_001360132.1;Parent=gene-AB11_RS09380;Dbxref=GenBank:WP_001360132.1;Name=WP_001360132.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AB11_RS09380;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_001360132.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 34329 35711 . - . ID=gene-AB11_RS09385;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AB11_RS09385;old_locus_tag=AB11_1581 NZ_JHDH01000112.1 Protein Homology CDS 34329 35711 . - 0 ID=cds-WP_000426292.1;Parent=gene-AB11_RS09385;Dbxref=GenBank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AB11_RS09385;product=diguanylate cyclase DosC;protein_id=WP_000426292.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 36075 37394 . - . ID=gene-AB11_RS09390;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AB11_RS09390;old_locus_tag=AB11_1582 NZ_JHDH01000112.1 Protein Homology CDS 36075 37394 . - 0 ID=cds-WP_000350395.1;Parent=gene-AB11_RS09390;Dbxref=GenBank:WP_000350395.1;Name=WP_000350395.1;Ontology_term=GO:0016798;gbkey=CDS;gene=digH;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AB11_RS09390;product=family 10 glycosylhydrolase;protein_id=WP_000350395.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 37525 39060 . - . ID=gene-AB11_RS09395;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AB11_RS09395;old_locus_tag=AB11_1583 NZ_JHDH01000112.1 Protein Homology CDS 37525 39060 . - 0 ID=cds-WP_000246019.1;Parent=gene-AB11_RS09395;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AB11_RS09395;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JHDH01000112.1 RefSeq gene 39216 40369 . - . ID=gene-AB11_RS09400;Name=AB11_RS09400;end_range=40369,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09400;old_locus_tag=AB11_1584;partial=true NZ_JHDH01000112.1 Protein Homology CDS 39216 40369 . - 2 ID=cds-WP_001398393.1;Parent=gene-AB11_RS09400;Dbxref=GenBank:WP_001398393.1;Name=WP_001398393.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=40369,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB11_RS09400;partial=true;product=glutamate decarboxylase;protein_id=WP_001398393.1;transl_table=11 ##sequence-region NZ_JHDH01000113.1 1 58753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000113.1 RefSeq region 1 58753 . + . ID=NZ_JHDH01000113.1:1..58753;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000113.1 RefSeq pseudogene 1 637 . + . ID=gene-AB11_RS09405;Name=AB11_RS09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09405;old_locus_tag=AB11_1585;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000113.1 Protein Homology CDS 1 637 . + 1 ID=cds-AB11_RS09405;Parent=gene-AB11_RS09405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS09405;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 651 1196 . - . ID=gene-AB11_RS09410;Name=AB11_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09410 NZ_JHDH01000113.1 GeneMarkS-2+ CDS 651 1196 . - 0 ID=cds-WP_248783581.1;Parent=gene-AB11_RS09410;Dbxref=GenBank:WP_248783581.1;Name=WP_248783581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS09410;product=hypothetical protein;protein_id=WP_248783581.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 1159 2238 . - . ID=gene-AB11_RS09415;Name=AB11_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09415;old_locus_tag=AB11_1587 NZ_JHDH01000113.1 GeneMarkS-2+ CDS 1159 2238 . - 0 ID=cds-WP_223411741.1;Parent=gene-AB11_RS09415;Dbxref=GenBank:WP_223411741.1;Name=WP_223411741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS09415;product=site-specific integrase;protein_id=WP_223411741.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 2921 4243 . - . ID=gene-AB11_RS09420;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AB11_RS09420;old_locus_tag=AB11_1588 NZ_JHDH01000113.1 Protein Homology CDS 2921 4243 . - 0 ID=cds-WP_001125439.1;Parent=gene-AB11_RS09420;Dbxref=GenBank:WP_001125439.1;Name=WP_001125439.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AB11_RS09420;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125439.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 4243 4509 . - . ID=gene-AB11_RS09425;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AB11_RS09425;old_locus_tag=AB11_1589 NZ_JHDH01000113.1 Protein Homology CDS 4243 4509 . - 0 ID=cds-WP_001301023.1;Parent=gene-AB11_RS09425;Dbxref=GenBank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AB11_RS09425;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001301023.1;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 4732 10153 . - . ID=gene-AB11_RS09435;Name=AB11_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09435;old_locus_tag=AB11_1591;pseudo=true NZ_JHDH01000113.1 Protein Homology CDS 4732 10153 . - 0 ID=cds-AB11_RS09435;Parent=gene-AB11_RS09435;Note=frameshifted%3B internal stop;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AB11_RS09435;product=ECSE_1600 family autotransporter;pseudo=true;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 10684 12276 . - . ID=gene-AB11_RS09440;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AB11_RS09440;old_locus_tag=AB11_1593 NZ_JHDH01000113.1 Protein Homology CDS 10684 12276 . - 0 ID=cds-WP_000113145.1;Parent=gene-AB11_RS09440;Dbxref=GenBank:WP_000113145.1;Name=WP_000113145.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AB11_RS09440;product=autoinducer-2 kinase;protein_id=WP_000113145.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 12355 13308 . - . ID=gene-AB11_RS09445;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AB11_RS09445;old_locus_tag=AB11_1594 NZ_JHDH01000113.1 Protein Homology CDS 12355 13308 . - 0 ID=cds-WP_000154352.1;Parent=gene-AB11_RS09445;Dbxref=GenBank:WP_000154352.1;Name=WP_000154352.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310146.1;locus_tag=AB11_RS09445;product=transcriptional regulator LsrR;protein_id=WP_000154352.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 13557 15092 . + . ID=gene-AB11_RS09450;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AB11_RS09450;old_locus_tag=AB11_1595 NZ_JHDH01000113.1 Protein Homology CDS 13557 15092 . + 0 ID=cds-WP_032223313.1;Parent=gene-AB11_RS09450;Dbxref=GenBank:WP_032223313.1;Name=WP_032223313.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AB11_RS09450;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_032223313.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 15086 16114 . + . ID=gene-AB11_RS09455;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AB11_RS09455;old_locus_tag=AB11_1596 NZ_JHDH01000113.1 Protein Homology CDS 15086 16114 . + 0 ID=cds-WP_000911166.1;Parent=gene-AB11_RS09455;Dbxref=GenBank:WP_000911166.1;Name=WP_000911166.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AB11_RS09455;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911166.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 16114 17106 . + . ID=gene-AB11_RS09460;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AB11_RS09460;old_locus_tag=AB11_1597 NZ_JHDH01000113.1 Protein Homology CDS 16114 17106 . + 0 ID=cds-WP_001222729.1;Parent=gene-AB11_RS09460;Dbxref=GenBank:WP_001222729.1;Name=WP_001222729.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AB11_RS09460;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222729.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 17118 18140 . + . ID=gene-AB11_RS09465;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AB11_RS09465;old_locus_tag=AB11_1598 NZ_JHDH01000113.1 Protein Homology CDS 17118 18140 . + 0 ID=cds-WP_000172488.1;Parent=gene-AB11_RS09465;Dbxref=GenBank:WP_000172488.1;Name=WP_000172488.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AB11_RS09465;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172488.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 18167 19042 . + . ID=gene-AB11_RS09470;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AB11_RS09470;old_locus_tag=AB11_1599 NZ_JHDH01000113.1 Protein Homology CDS 18167 19042 . + 0 ID=cds-WP_032223315.1;Parent=gene-AB11_RS09470;Dbxref=GenBank:WP_032223315.1;Name=WP_032223315.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AB11_RS09470;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_032223315.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 19066 19356 . + . ID=gene-AB11_RS09475;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AB11_RS09475;old_locus_tag=AB11_1600 NZ_JHDH01000113.1 Protein Homology CDS 19066 19356 . + 0 ID=cds-WP_000558527.1;Parent=gene-AB11_RS09475;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AB11_RS09475;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 19413 20171 . + . ID=gene-AB11_RS09480;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AB11_RS09480;old_locus_tag=AB11_1601 NZ_JHDH01000113.1 Protein Homology CDS 19413 20171 . + 0 ID=cds-WP_001286597.1;Parent=gene-AB11_RS09480;Dbxref=GenBank:WP_001286597.1;Name=WP_001286597.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AB11_RS09480;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 20175 21089 . - . ID=gene-AB11_RS09485;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AB11_RS09485;old_locus_tag=AB11_1602 NZ_JHDH01000113.1 Protein Homology CDS 20175 21089 . - 0 ID=cds-WP_001351738.1;Parent=gene-AB11_RS09485;Dbxref=GenBank:WP_001351738.1;Name=WP_001351738.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AB11_RS09485;product=bestrophin family protein;protein_id=WP_001351738.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 21296 22747 . - . ID=gene-AB11_RS09490;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AB11_RS09490;old_locus_tag=AB11_1603 NZ_JHDH01000113.1 Protein Homology CDS 21296 22747 . - 0 ID=cds-WP_000854633.1;Parent=gene-AB11_RS09490;Dbxref=GenBank:WP_000854633.1;Name=WP_000854633.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AB11_RS09490;product=tagaturonate reductase;protein_id=WP_000854633.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 22974 24392 . - . ID=gene-AB11_RS09495;Name=AB11_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09495;old_locus_tag=AB11_1604 NZ_JHDH01000113.1 Protein Homology CDS 22974 24392 . - 0 ID=cds-WP_001405226.1;Parent=gene-AB11_RS09495;Dbxref=GenBank:WP_001405226.1;Name=WP_001405226.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AB11_RS09495;product=sensor domain-containing diguanylate cyclase;protein_id=WP_001405226.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 24531 24890 . - . ID=gene-AB11_RS09500;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AB11_RS09500;old_locus_tag=AB11_1605 NZ_JHDH01000113.1 Protein Homology CDS 24531 24890 . - 0 ID=cds-WP_001191027.1;Parent=gene-AB11_RS09500;Dbxref=GenBank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AB11_RS09500;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 24890 25816 . - . ID=gene-AB11_RS09505;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AB11_RS09505;old_locus_tag=AB11_1606 NZ_JHDH01000113.1 Protein Homology CDS 24890 25816 . - 0 ID=cds-WP_000257409.1;Parent=gene-AB11_RS09505;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AB11_RS09505;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 25880 27268 . - . ID=gene-AB11_RS09510;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AB11_RS09510;old_locus_tag=AB11_1607 NZ_JHDH01000113.1 Protein Homology CDS 25880 27268 . - 0 ID=cds-WP_000156615.1;Parent=gene-AB11_RS09510;Dbxref=GenBank:WP_000156615.1;Name=WP_000156615.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AB11_RS09510;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000156615.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 27369 28250 . + . ID=gene-AB11_RS09515;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AB11_RS09515;old_locus_tag=AB11_1608 NZ_JHDH01000113.1 Protein Homology CDS 27369 28250 . + 0 ID=cds-WP_000366501.1;Parent=gene-AB11_RS09515;Dbxref=GenBank:WP_000366501.1;Name=WP_000366501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AB11_RS09515;product=putrescine utilization regulator PtrR;protein_id=WP_000366501.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 28328 29443 . + . ID=gene-AB11_RS09520;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AB11_RS09520;old_locus_tag=AB11_1609 NZ_JHDH01000113.1 Protein Homology CDS 28328 29443 . + 0 ID=cds-WP_000258600.1;Parent=gene-AB11_RS09520;Dbxref=GenBank:WP_000258600.1;Name=WP_000258600.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AB11_RS09520;product=putative protein YneK;protein_id=WP_000258600.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 29593 30783 . + . ID=gene-AB11_RS09525;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AB11_RS09525;old_locus_tag=AB11_1610 NZ_JHDH01000113.1 Protein Homology CDS 29593 30783 . + 0 ID=cds-WP_000210799.1;Parent=gene-AB11_RS09525;Dbxref=GenBank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AB11_RS09525;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 30808 31473 . - . ID=gene-AB11_RS09530;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AB11_RS09530;old_locus_tag=AB11_1611 NZ_JHDH01000113.1 Protein Homology CDS 30808 31473 . - 0 ID=cds-WP_000885033.1;Parent=gene-AB11_RS09530;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AB11_RS09530;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 31685 32119 . + . ID=gene-AB11_RS09535;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AB11_RS09535;old_locus_tag=AB11_1612 NZ_JHDH01000113.1 Protein Homology CDS 31685 32119 . + 0 ID=cds-WP_000843414.1;Parent=gene-AB11_RS09535;Dbxref=GenBank:WP_000843414.1;Name=WP_000843414.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416047.4;locus_tag=AB11_RS09535;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843414.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 32139 32522 . + . ID=gene-AB11_RS09540;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AB11_RS09540;old_locus_tag=AB11_1613 NZ_JHDH01000113.1 Protein Homology CDS 32139 32522 . + 0 ID=cds-WP_000091199.1;Parent=gene-AB11_RS09540;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AB11_RS09540;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 32554 32772 . + . ID=gene-AB11_RS09545;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AB11_RS09545;old_locus_tag=AB11_1614 NZ_JHDH01000113.1 Protein Homology CDS 32554 32772 . + 0 ID=cds-WP_032223317.1;Parent=gene-AB11_RS09545;Dbxref=GenBank:WP_032223317.1;Name=WP_032223317.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AB11_RS09545;product=multiple antibiotic resistance protein MarB;protein_id=WP_032223317.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 32803 33702 . - . ID=gene-AB11_RS09550;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AB11_RS09550;old_locus_tag=AB11_1615 NZ_JHDH01000113.1 Protein Homology CDS 32803 33702 . - 0 ID=cds-WP_000087214.1;Parent=gene-AB11_RS09550;Dbxref=GenBank:WP_000087214.1;Name=WP_000087214.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416050.4;locus_tag=AB11_RS09550;product=O-acetylserine/cysteine exporter;protein_id=WP_000087214.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 33897 35084 . + . ID=gene-AB11_RS09555;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AB11_RS09555;old_locus_tag=AB11_1616 NZ_JHDH01000113.1 Protein Homology CDS 33897 35084 . + 0 ID=cds-WP_001054183.1;Parent=gene-AB11_RS09555;Dbxref=GenBank:WP_001054183.1;Name=WP_001054183.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AB11_RS09555;product=efflux MFS transporter YdeE;protein_id=WP_001054183.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 35211 35306 . + . ID=gene-AB11_RS09560;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AB11_RS09560 NZ_JHDH01000113.1 Protein Homology CDS 35211 35306 . + 0 ID=cds-WP_000901367.1;Parent=gene-AB11_RS09560;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AB11_RS09560;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 35306 35410 . + . ID=gene-AB11_RS25320;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AB11_RS25320 NZ_JHDH01000113.1 Protein Homology CDS 35306 35410 . + 0 ID=cds-WP_211180496.1;Parent=gene-AB11_RS25320;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AB11_RS25320;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 35525 36415 . - . ID=gene-AB11_RS09565;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AB11_RS09565;old_locus_tag=AB11_1618 NZ_JHDH01000113.1 Protein Homology CDS 35525 36415 . - 0 ID=cds-WP_000592814.1;Parent=gene-AB11_RS09565;Dbxref=GenBank:WP_000592814.1;Name=WP_000592814.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AB11_RS09565;product=diguanylate cyclase DgcZ;protein_id=WP_000592814.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 36670 37062 . - . ID=gene-AB11_RS09570;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AB11_RS09570;old_locus_tag=AB11_1619 NZ_JHDH01000113.1 Protein Homology CDS 36670 37062 . - 0 ID=cds-WP_032223321.1;Parent=gene-AB11_RS09570;Dbxref=GenBank:WP_032223321.1;Name=WP_032223321.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AB11_RS09570;product=YdeI family stress tolerance OB fold protein;protein_id=WP_032223321.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 37338 37856 . + . ID=gene-AB11_RS09575;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AB11_RS09575;old_locus_tag=AB11_1620 NZ_JHDH01000113.1 Protein Homology CDS 37338 37856 . + 0 ID=cds-WP_001024746.1;Parent=gene-AB11_RS09575;Dbxref=GenBank:WP_001024746.1;Name=WP_001024746.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416055.1;locus_tag=AB11_RS09575;product=2-oxo-tetronate isomerase;protein_id=WP_001024746.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 37900 39945 . - . ID=gene-AB11_RS09580;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AB11_RS09580;old_locus_tag=AB11_1621 NZ_JHDH01000113.1 Protein Homology CDS 37900 39945 . - 0 ID=cds-WP_000210373.1;Parent=gene-AB11_RS09580;Dbxref=GenBank:WP_000210373.1;Name=WP_000210373.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416056.1;locus_tag=AB11_RS09580;product=peptidyl-dipeptidase Dcp;protein_id=WP_000210373.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 40082 40828 . + . ID=gene-AB11_RS09585;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AB11_RS09585;old_locus_tag=AB11_1622 NZ_JHDH01000113.1 Protein Homology CDS 40082 40828 . + 0 ID=cds-WP_000636571.1;Parent=gene-AB11_RS09585;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AB11_RS09585;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 40917 41603 . + . ID=gene-AB11_RS09590;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AB11_RS09590;old_locus_tag=AB11_1623 NZ_JHDH01000113.1 Protein Homology CDS 40917 41603 . + 0 ID=cds-WP_000215549.1;Parent=gene-AB11_RS09590;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AB11_RS09590;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 41780 41983 . + . ID=gene-AB11_RS09595;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AB11_RS09595;old_locus_tag=AB11_1624 NZ_JHDH01000113.1 Protein Homology CDS 41780 41983 . + 0 ID=cds-WP_000214712.1;Parent=gene-AB11_RS09595;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AB11_RS09595;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 42018 43478 . - . ID=gene-AB11_RS09600;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AB11_RS09600;old_locus_tag=AB11_1625 NZ_JHDH01000113.1 Protein Homology CDS 42018 43478 . - 0 ID=cds-WP_000527809.1;Parent=gene-AB11_RS09600;Dbxref=GenBank:WP_000527809.1;Name=WP_000527809.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416060.1;locus_tag=AB11_RS09600;product=mannitol dehydrogenase family protein;protein_id=WP_000527809.1;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 43567 44850 . - . ID=gene-AB11_RS09605;Name=ydfJ;end_range=44850,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AB11_RS09605;old_locus_tag=AB11_1626;partial=true;pseudo=true NZ_JHDH01000113.1 Protein Homology CDS 43567 44850 . - 0 ID=cds-AB11_RS09605;Parent=gene-AB11_RS09605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44850,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AB11_RS09605;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 45453 45566 . + . ID=gene-AB11_RS09610;Name=ynfT;gbkey=Gene;gene=ynfT;gene_biotype=protein_coding;locus_tag=AB11_RS09610 NZ_JHDH01000113.1 Protein Homology CDS 45453 45566 . + 0 ID=cds-WP_120795384.1;Parent=gene-AB11_RS09610;Dbxref=GenBank:WP_120795384.1;Name=WP_120795384.1;gbkey=CDS;gene=ynfT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=AB11_RS09610;product=YnaM/YnfT family protein;protein_id=WP_120795384.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 45635 45868 . + . ID=gene-AB11_RS09615;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=AB11_RS09615;old_locus_tag=AB11_1627 NZ_JHDH01000113.1 Protein Homology CDS 45635 45868 . + 0 ID=cds-WP_000836768.1;Parent=gene-AB11_RS09615;Dbxref=GenBank:WP_000836768.1;Name=WP_000836768.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=AB11_RS09615;product=cold shock protein YdfK;protein_id=WP_000836768.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 46185 46775 . + . ID=gene-AB11_RS09620;Name=pinQ;gbkey=Gene;gene=pinQ;gene_biotype=protein_coding;locus_tag=AB11_RS09620;old_locus_tag=AB11_1628 NZ_JHDH01000113.1 Protein Homology CDS 46185 46775 . + 0 ID=cds-WP_000086531.1;Parent=gene-AB11_RS09620;Dbxref=GenBank:WP_000086531.1;Name=WP_000086531.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;gene=pinQ;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415892.1;locus_tag=AB11_RS09620;product=recombinase family protein;protein_id=WP_000086531.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 46873 47448 . - . ID=gene-AB11_RS09625;Name=tfaQ;gbkey=Gene;gene=tfaQ;gene_biotype=protein_coding;locus_tag=AB11_RS09625;old_locus_tag=AB11_1629 NZ_JHDH01000113.1 Protein Homology CDS 46873 47448 . - 0 ID=cds-WP_000885634.1;Parent=gene-AB11_RS09625;Dbxref=GenBank:WP_000885634.1;Name=WP_000885634.1;Ontology_term=GO:0098004;gbkey=CDS;gene=tfaQ;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416064.1;locus_tag=AB11_RS09625;product=tail fiber assembly protein;protein_id=WP_000885634.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 47448 50798 . - . ID=gene-AB11_RS09630;Name=AB11_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09630 NZ_JHDH01000113.1 Protein Homology CDS 47448 50798 . - 0 ID=cds-WP_071889255.1;Parent=gene-AB11_RS09630;Dbxref=GenBank:WP_071889255.1;Name=WP_071889255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279189.1;locus_tag=AB11_RS09630;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_071889255.1;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 50852 50947 . - . ID=gene-AB11_RS09635;Name=AB11_RS09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09635;old_locus_tag=AB11_1632;partial=true;pseudo=true;start_range=.,50852 NZ_JHDH01000113.1 Protein Homology CDS 50852 50947 . - 0 ID=cds-AB11_RS09635;Parent=gene-AB11_RS09635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309665.1;locus_tag=AB11_RS09635;partial=true;product=phage tail protein;pseudo=true;start_range=.,50852;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 50959 51312 . - . ID=gene-AB11_RS09640;Name=AB11_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09640;old_locus_tag=AB11_1633 NZ_JHDH01000113.1 Protein Homology CDS 50959 51312 . - 0 ID=cds-WP_000753007.1;Parent=gene-AB11_RS09640;Dbxref=GenBank:WP_000753007.1;Name=WP_000753007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309664.1;locus_tag=AB11_RS09640;product=head-tail joining protein;protein_id=WP_000753007.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 51324 51722 . - . ID=gene-AB11_RS09645;Name=AB11_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09645;old_locus_tag=AB11_1634 NZ_JHDH01000113.1 Protein Homology CDS 51324 51722 . - 0 ID=cds-WP_023281240.1;Parent=gene-AB11_RS09645;Dbxref=GenBank:WP_023281240.1;Name=WP_023281240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309663.1;locus_tag=AB11_RS09645;product=DNA-packaging protein FI;protein_id=WP_023281240.1;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 51764 52240 . - . ID=gene-AB11_RS09650;Name=AB11_RS09650;end_range=52240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09650;old_locus_tag=AB11_1635;partial=true;pseudo=true NZ_JHDH01000113.1 Protein Homology CDS 51764 52240 . - 0 ID=cds-AB11_RS09650;Parent=gene-AB11_RS09650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=52240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309662.1;locus_tag=AB11_RS09650;partial=true;product=major capsid protein;pseudo=true;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 52240 53472 . - . ID=gene-AB11_RS09655;Name=AB11_RS09655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09655;old_locus_tag=AB11_1636;partial=true;pseudo=true;start_range=.,52240 NZ_JHDH01000113.1 Protein Homology CDS 52240 53472 . - 0 ID=cds-AB11_RS09655;Parent=gene-AB11_RS09655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=AB11_RS09655;partial=true;product=terminase gpA endonuclease subunit;pseudo=true;start_range=.,52240;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 53447 53992 . - . ID=gene-AB11_RS09660;Name=nohA;gbkey=Gene;gene=nohA;gene_biotype=protein_coding;locus_tag=AB11_RS09660;old_locus_tag=AB11_1637 NZ_JHDH01000113.1 Protein Homology CDS 53447 53992 . - 0 ID=cds-WP_021575143.1;Parent=gene-AB11_RS09660;Dbxref=GenBank:WP_021575143.1;Name=WP_021575143.1;gbkey=CDS;gene=nohA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=AB11_RS09660;product=DNA-packaging protein;protein_id=WP_021575143.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 54381 54614 . + . ID=gene-AB11_RS09665;Name=ynfO;gbkey=Gene;gene=ynfO;gene_biotype=protein_coding;locus_tag=AB11_RS09665;old_locus_tag=AB11_1638 NZ_JHDH01000113.1 Protein Homology CDS 54381 54614 . + 0 ID=cds-WP_001368374.1;Parent=gene-AB11_RS09665;Dbxref=GenBank:WP_001368374.1;Name=WP_001368374.1;gbkey=CDS;gene=ynfO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AB11_RS09665;product=YlcI/YnfO family protein;protein_id=WP_001368374.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 54672 55082 . + . ID=gene-AB11_RS09670;Name=ydfO;gbkey=Gene;gene=ydfO;gene_biotype=protein_coding;locus_tag=AB11_RS09670 NZ_JHDH01000113.1 Protein Homology CDS 54672 55082 . + 0 ID=cds-WP_000373090.1;Parent=gene-AB11_RS09670;Dbxref=GenBank:WP_000373090.1;Name=WP_000373090.1;gbkey=CDS;gene=ydfO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416067.2;locus_tag=AB11_RS09670;product=DUF1398 domain-containing protein;protein_id=WP_000373090.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 55234 55407 . - . ID=gene-AB11_RS09675;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;locus_tag=AB11_RS09675;old_locus_tag=AB11_1639 NZ_JHDH01000113.1 Protein Homology CDS 55234 55407 . - 0 ID=cds-WP_001019606.1;Parent=gene-AB11_RS09675;Dbxref=GenBank:WP_001019606.1;Name=WP_001019606.1;gbkey=CDS;gene=gnsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416068.2;locus_tag=AB11_RS09675;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019606.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 55579 55809 . - . ID=gene-AB11_RS09680;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=protein_coding;locus_tag=AB11_RS09680 NZ_JHDH01000113.1 Protein Homology CDS 55579 55809 . - 0 ID=cds-WP_000720962.1;Parent=gene-AB11_RS09680;Dbxref=GenBank:WP_000720962.1;Name=WP_000720962.1;gbkey=CDS;gene=ynfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720962.1;locus_tag=AB11_RS09680;product=protein YnfN;protein_id=WP_000720962.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 55814 55879 . - . ID=gene-AB11_RS09685;Name=ynfR;gbkey=Gene;gene=ynfR;gene_biotype=protein_coding;locus_tag=AB11_RS09685 NZ_JHDH01000113.1 Protein Homology CDS 55814 55879 . - 0 ID=cds-WP_120795388.1;Parent=gene-AB11_RS09685;Dbxref=GenBank:WP_120795388.1;Name=WP_120795388.1;gbkey=CDS;gene=ynfR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518789.1;locus_tag=AB11_RS09685;product=small protein YnfR;protein_id=WP_120795388.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 55882 56070 . - . ID=gene-AB11_RS09690;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AB11_RS09690 NZ_JHDH01000113.1 Protein Homology CDS 55882 56070 . - 0 ID=cds-WP_071524604.1;Parent=gene-AB11_RS09690;Dbxref=GenBank:WP_071524604.1;Name=WP_071524604.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=AB11_RS09690;product=cold shock small protein YmcF;protein_id=WP_071524604.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 56081 56293 . - . ID=gene-AB11_RS09695;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;locus_tag=AB11_RS09695;old_locus_tag=AB11_1640 NZ_JHDH01000113.1 Protein Homology CDS 56081 56293 . - 0 ID=cds-WP_000066495.1;Parent=gene-AB11_RS09695;Dbxref=GenBank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;gene=cspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416070.1;locus_tag=AB11_RS09695;product=cold shock protein CspI;protein_id=WP_000066495.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 56656 57153 . - . ID=gene-AB11_RS09700;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;locus_tag=AB11_RS09700;old_locus_tag=AB11_1641 NZ_JHDH01000113.1 Protein Homology CDS 56656 57153 . - 0 ID=cds-WP_001071769.1;Parent=gene-AB11_RS09700;Dbxref=GenBank:WP_001071769.1;Name=WP_001071769.1;gbkey=CDS;gene=rzpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416071.1;locus_tag=AB11_RS09700;product=DUF2514 domain-containing protein;protein_id=WP_001071769.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 57150 57683 . - . ID=gene-AB11_RS09705;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AB11_RS09705;old_locus_tag=AB11_1642 NZ_JHDH01000113.1 Protein Homology CDS 57150 57683 . - 0 ID=cds-WP_001092971.1;Parent=gene-AB11_RS09705;Dbxref=GenBank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AB11_RS09705;product=lysozyme;protein_id=WP_001092971.1;transl_table=11 NZ_JHDH01000113.1 RefSeq gene 57680 57991 . - . ID=gene-AB11_RS09710;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;locus_tag=AB11_RS09710;old_locus_tag=AB11_1643 NZ_JHDH01000113.1 Protein Homology CDS 57680 57991 . - 0 ID=cds-WP_000189916.1;Parent=gene-AB11_RS09710;Dbxref=GenBank:WP_000189916.1;Name=WP_000189916.1;gbkey=CDS;gene=ydfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=AB11_RS09710;product=YdfR family protein;protein_id=WP_000189916.1;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 57996 58073 . - . ID=gene-AB11_RS09715;Name=essD;end_range=58073,.;gbkey=Gene;gene=essD;gene_biotype=pseudogene;locus_tag=AB11_RS09715;partial=true;pseudo=true NZ_JHDH01000113.1 Protein Homology CDS 57996 58073 . - 0 ID=cds-AB11_RS09715;Parent=gene-AB11_RS09715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=58073,.;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310215.1;locus_tag=AB11_RS09715;partial=true;product=phage lysis protein EssD;pseudo=true;transl_table=11 NZ_JHDH01000113.1 RefSeq pseudogene 58139 58753 . + . ID=gene-AB11_RS09720;Name=AB11_RS09720;end_range=58753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09720;partial=true;pseudo=true NZ_JHDH01000113.1 Protein Homology CDS 58139 58753 . + 0 ID=cds-AB11_RS09720;Parent=gene-AB11_RS09720;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=58753,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS09720;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000114.1 1 5053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000114.1 RefSeq region 1 5053 . + . ID=NZ_JHDH01000114.1:1..5053;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000114.1 RefSeq gene 1 1038 . + . ID=gene-AB11_RS09725;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AB11_RS09725;old_locus_tag=AB11_1646;partial=true;start_range=.,1 NZ_JHDH01000114.1 Protein Homology CDS 1 1038 . + 0 ID=cds-WP_032223341.1;Parent=gene-AB11_RS09725;Dbxref=GenBank:WP_032223341.1;Name=WP_032223341.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB11_RS09725;partial=true;product=IS66 family transposase;protein_id=WP_032223341.1;start_range=.,1;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 1078 1155 . + . ID=gene-AB11_RS25540;Name=AB11_RS25540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25540;partial=true;pseudo=true;start_range=.,1078 NZ_JHDH01000114.1 Protein Homology CDS 1078 1155 . + 0 ID=cds-AB11_RS25540;Parent=gene-AB11_RS25540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=AB11_RS25540;partial=true;product=DUF6404 family protein;pseudo=true;start_range=.,1078;transl_table=11 NZ_JHDH01000114.1 RefSeq gene 1277 2635 . - . ID=gene-AB11_RS09730;Name=AB11_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09730;old_locus_tag=AB11_1647 NZ_JHDH01000114.1 Protein Homology CDS 1277 2635 . - 0 ID=cds-WP_021570942.1;Parent=gene-AB11_RS09730;Dbxref=GenBank:WP_021570942.1;Name=WP_021570942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823236.1;locus_tag=AB11_RS09730;product=esterase-like activity of phytase family protein;protein_id=WP_021570942.1;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 2916 3047 . + . ID=gene-AB11_RS09735;Name=AB11_RS09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09735;partial=true;pseudo=true;start_range=.,2916 NZ_JHDH01000114.1 Protein Homology CDS 2916 3047 . + 0 ID=cds-AB11_RS09735;Parent=gene-AB11_RS09735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB11_RS09735;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2916;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 3112 3242 . + . ID=gene-AB11_RS26055;Name=AB11_RS26055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26055;partial=true;pseudo=true;start_range=.,3112 NZ_JHDH01000114.1 Protein Homology CDS 3112 3242 . + 0 ID=cds-AB11_RS26055;Parent=gene-AB11_RS26055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856299.1;locus_tag=AB11_RS26055;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3112;transl_table=11 NZ_JHDH01000114.1 RefSeq gene 3367 3660 . - . ID=gene-AB11_RS09740;Name=AB11_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09740;old_locus_tag=AB11_1649 NZ_JHDH01000114.1 Protein Homology CDS 3367 3660 . - 0 ID=cds-WP_000239862.1;Parent=gene-AB11_RS09740;Dbxref=GenBank:WP_000239862.1;Name=WP_000239862.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AB11_RS09740;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_000239862.1;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 3964 4062 . - . ID=gene-AB11_RS09745;Name=AB11_RS09745;end_range=4062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09745;partial=true;pseudo=true NZ_JHDH01000114.1 Protein Homology CDS 3964 4062 . - 0 ID=cds-AB11_RS09745;Parent=gene-AB11_RS09745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4062,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS09745;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 4062 4266 . - . ID=gene-AB11_RS25545;Name=AB11_RS25545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25545;partial=true;pseudo=true;start_range=.,4062 NZ_JHDH01000114.1 Protein Homology CDS 4062 4266 . - 0 ID=cds-AB11_RS25545;Parent=gene-AB11_RS25545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS25545;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4062;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 4304 4375 . + . ID=gene-AB11_RS09750;Name=AB11_RS09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09750;partial=true;pseudo=true;start_range=.,4304 NZ_JHDH01000114.1 Protein Homology CDS 4304 4375 . + 0 ID=cds-AB11_RS09750;Parent=gene-AB11_RS09750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AB11_RS09750;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4304;transl_table=11 NZ_JHDH01000114.1 RefSeq pseudogene 4386 5053 . - . ID=gene-AB11_RS09755;Name=AB11_RS09755;end_range=5053,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09755;partial=true;pseudo=true NZ_JHDH01000114.1 Protein Homology CDS 4386 5053 . - 0 ID=cds-AB11_RS09755;Parent=gene-AB11_RS09755;Note=programmed frameshift%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5053,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AB11_RS09755;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000115.1 1 96519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000115.1 RefSeq region 1 96519 . + . ID=NZ_JHDH01000115.1:1..96519;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000115.1 RefSeq gene 1 300 . + . ID=gene-AB11_RS09760;Name=AB11_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09760;old_locus_tag=AB11_1653;partial=true;start_range=.,1 NZ_JHDH01000115.1 Protein Homology CDS 1 300 . + 0 ID=cds-WP_000322160.1;Parent=gene-AB11_RS09760;Dbxref=GenBank:WP_000322160.1;Name=WP_000322160.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS09760;partial=true;product=IS3 family transposase;protein_id=WP_000322160.1;start_range=.,1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 358 507 . - . ID=gene-AB11_RS25550;Name=ydfW;gbkey=Gene;gene=ydfW;gene_biotype=protein_coding;locus_tag=AB11_RS25550 NZ_JHDH01000115.1 Protein Homology CDS 358 507 . - 0 ID=cds-WP_011443592.1;Parent=gene-AB11_RS25550;Dbxref=GenBank:WP_011443592.1;Name=WP_011443592.1;gbkey=CDS;gene=ydfW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518792.1;locus_tag=AB11_RS25550;product=protein YdfW;protein_id=WP_011443592.1;transl_table=11 NZ_JHDH01000115.1 RefSeq pseudogene 628 1671 . - . ID=gene-AB11_RS09765;Name=AB11_RS09765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS09765;old_locus_tag=AB11_1654;partial=true;pseudo=true;start_range=.,628 NZ_JHDH01000115.1 Protein Homology CDS 628 1671 . - 0 ID=cds-AB11_RS09765;Parent=gene-AB11_RS09765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033594.2;locus_tag=AB11_RS09765;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,628;transl_table=11 NZ_JHDH01000115.1 RefSeq pseudogene 2306 2727 . - . ID=gene-AB11_RS25210;Name=AB11_RS25210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25210;pseudo=true NZ_JHDH01000115.1 Protein Homology CDS 2306 2727 . - 0 ID=cds-AB11_RS25210;Parent=gene-AB11_RS25210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236032.1;locus_tag=AB11_RS25210;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000115.1 RefSeq pseudogene 2893 3075 . - . ID=gene-AB11_RS25760;Name=AB11_RS25760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25760;pseudo=true NZ_JHDH01000115.1 Protein Homology CDS 2893 3075 . - 0 ID=cds-AB11_RS25760;Parent=gene-AB11_RS25760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224679.1;locus_tag=AB11_RS25760;product=DUF7167 family protein;pseudo=true;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 3338 3649 . - . ID=gene-AB11_RS09775;Name=AB11_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09775;old_locus_tag=AB11_1658 NZ_JHDH01000115.1 Protein Homology CDS 3338 3649 . - 0 ID=cds-WP_001326992.1;Parent=gene-AB11_RS09775;Dbxref=GenBank:WP_001326992.1;Name=WP_001326992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326992.1;locus_tag=AB11_RS09775;product=class I SAM-dependent methyltransferase;protein_id=WP_001326992.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 3751 3939 . + . ID=gene-AB11_RS09780;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AB11_RS09780;old_locus_tag=AB11_1659 NZ_JHDH01000115.1 Protein Homology CDS 3751 3939 . + 0 ID=cds-WP_000854559.1;Parent=gene-AB11_RS09780;Dbxref=GenBank:WP_000854559.1;Name=WP_000854559.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416092.1;locus_tag=AB11_RS09780;product=cell division inhibition protein DicB;protein_id=WP_000854559.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 3936 4127 . + . ID=gene-AB11_RS09785;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=AB11_RS09785;old_locus_tag=AB11_1660 NZ_JHDH01000115.1 Protein Homology CDS 3936 4127 . + 0 ID=cds-WP_001083297.1;Parent=gene-AB11_RS09785;Dbxref=GenBank:WP_001083297.1;Name=WP_001083297.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416093.1;locus_tag=AB11_RS09785;product=lysis protein YdfD;protein_id=WP_001083297.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 4220 6691 . + . ID=gene-AB11_RS09790;Name=AB11_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09790;old_locus_tag=AB11_1661 NZ_JHDH01000115.1 Protein Homology CDS 4220 6691 . + 0 ID=cds-WP_021570798.1;Parent=gene-AB11_RS09790;Dbxref=GenBank:WP_021570798.1;Name=WP_021570798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AB11_RS09790;product=exonuclease;protein_id=WP_021570798.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 6764 7015 . + . ID=gene-AB11_RS09795;Name=AB11_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09795;old_locus_tag=AB11_1662 NZ_JHDH01000115.1 Protein Homology CDS 6764 7015 . + 0 ID=cds-WP_000005552.1;Parent=gene-AB11_RS09795;Dbxref=GenBank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=AB11_RS09795;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 7050 8330 . + . ID=gene-AB11_RS09800;Name=AB11_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09800;old_locus_tag=AB11_1663 NZ_JHDH01000115.1 Protein Homology CDS 7050 8330 . + 0 ID=cds-WP_001620827.1;Parent=gene-AB11_RS09800;Dbxref=GenBank:WP_001620827.1;Name=WP_001620827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AB11_RS09800;product=site-specific integrase;protein_id=WP_001620827.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 8518 9537 . - . ID=gene-AB11_RS09810;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AB11_RS09810;old_locus_tag=AB11_1664 NZ_JHDH01000115.1 Protein Homology CDS 8518 9537 . - 0 ID=cds-WP_000836066.1;Parent=gene-AB11_RS09810;Dbxref=GenBank:WP_000836066.1;Name=WP_000836066.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AB11_RS09810;product=Zn-dependent oxidoreductase;protein_id=WP_000836066.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 9549 10763 . - . ID=gene-AB11_RS09815;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AB11_RS09815;old_locus_tag=AB11_1665 NZ_JHDH01000115.1 Protein Homology CDS 9549 10763 . - 0 ID=cds-WP_001295394.1;Parent=gene-AB11_RS09815;Dbxref=GenBank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AB11_RS09815;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 10969 11295 . - . ID=gene-AB11_RS09820;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AB11_RS09820;old_locus_tag=AB11_1666 NZ_JHDH01000115.1 Protein Homology CDS 10969 11295 . - 0 ID=cds-WP_000598292.1;Parent=gene-AB11_RS09820;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AB11_RS09820;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 11430 11771 . + . ID=gene-AB11_RS09825;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AB11_RS09825;old_locus_tag=AB11_1667 NZ_JHDH01000115.1 Protein Homology CDS 11430 11771 . + 0 ID=cds-WP_000705211.1;Parent=gene-AB11_RS09825;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AB11_RS09825;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 11806 12366 . + . ID=gene-AB11_RS09830;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AB11_RS09830;old_locus_tag=AB11_1668 NZ_JHDH01000115.1 Protein Homology CDS 11806 12366 . + 0 ID=cds-WP_001138581.1;Parent=gene-AB11_RS09830;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AB11_RS09830;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 12369 13079 . - . ID=gene-AB11_RS09835;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AB11_RS09835;old_locus_tag=AB11_1669 NZ_JHDH01000115.1 Protein Homology CDS 12369 13079 . - 0 ID=cds-WP_001321287.1;Parent=gene-AB11_RS09835;Dbxref=GenBank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AB11_RS09835;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 13187 13492 . + . ID=gene-AB11_RS09840;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AB11_RS09840;old_locus_tag=AB11_1670 NZ_JHDH01000115.1 Protein Homology CDS 13187 13492 . + 0 ID=cds-WP_001300836.1;Parent=gene-AB11_RS09840;Dbxref=GenBank:WP_001300836.1;Name=WP_001300836.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416103.2;locus_tag=AB11_RS09840;product=DUF1161 domain-containing protein;protein_id=WP_001300836.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 13691 16117 . + . ID=gene-AB11_RS09845;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AB11_RS09845;old_locus_tag=AB11_1671 NZ_JHDH01000115.1 Protein Homology CDS 13691 16117 . + 0 ID=cds-WP_000041681.1;Parent=gene-AB11_RS09845;Dbxref=GenBank:WP_000041681.1;Name=WP_000041681.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AB11_RS09845;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_000041681.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 16178 18601 . + . ID=gene-AB11_RS09850;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AB11_RS09850;old_locus_tag=AB11_1672 NZ_JHDH01000115.1 Protein Homology CDS 16178 18601 . + 0 ID=cds-WP_077699289.1;Parent=gene-AB11_RS09850;Dbxref=GenBank:WP_077699289.1;Name=WP_077699289.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AB11_RS09850;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_077699289.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 18612 19229 . + . ID=gene-AB11_RS09855;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AB11_RS09855;old_locus_tag=AB11_1673 NZ_JHDH01000115.1 Protein Homology CDS 18612 19229 . + 0 ID=cds-WP_000213028.1;Parent=gene-AB11_RS09855;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB11_RS09855;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 19231 20085 . + . ID=gene-AB11_RS09860;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AB11_RS09860;old_locus_tag=AB11_1674 NZ_JHDH01000115.1 Protein Homology CDS 19231 20085 . + 0 ID=cds-WP_000526503.1;Parent=gene-AB11_RS09860;Dbxref=GenBank:WP_000526503.1;Name=WP_000526503.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AB11_RS09860;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_000526503.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 20128 20742 . + . ID=gene-AB11_RS09865;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AB11_RS09865;old_locus_tag=AB11_1675 NZ_JHDH01000115.1 Protein Homology CDS 20128 20742 . + 0 ID=cds-WP_000148710.1;Parent=gene-AB11_RS09865;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AB11_RS09865;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 20901 22193 . + . ID=gene-AB11_RS09870;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AB11_RS09870;old_locus_tag=AB11_1676 NZ_JHDH01000115.1 Protein Homology CDS 20901 22193 . + 0 ID=cds-WP_071996226.1;Parent=gene-AB11_RS09870;Dbxref=GenBank:WP_071996226.1;Name=WP_071996226.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AB11_RS09870;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_071996226.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 22146 22841 . - . ID=gene-AB11_RS09875;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB11_RS09875;old_locus_tag=AB11_1677 NZ_JHDH01000115.1 Protein Homology CDS 22146 22841 . - 0 ID=cds-WP_000919226.1;Parent=gene-AB11_RS09875;Dbxref=GenBank:WP_000919226.1;Name=WP_000919226.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AB11_RS09875;product=dethiobiotin synthase;protein_id=WP_000919226.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 22966 24186 . - . ID=gene-AB11_RS09880;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AB11_RS09880;old_locus_tag=AB11_1678 NZ_JHDH01000115.1 Protein Homology CDS 22966 24186 . - 0 ID=cds-WP_000225276.1;Parent=gene-AB11_RS09880;Dbxref=GenBank:WP_000225276.1;Name=WP_000225276.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=AB11_RS09880;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225276.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 24321 25214 . - . ID=gene-AB11_RS09885;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AB11_RS09885;old_locus_tag=AB11_1679 NZ_JHDH01000115.1 Protein Homology CDS 24321 25214 . - 0 ID=cds-WP_001019530.1;Parent=gene-AB11_RS09885;Dbxref=GenBank:WP_001019530.1;Name=WP_001019530.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=AB11_RS09885;product=LysR family transcriptional regulator;protein_id=WP_001019530.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 25321 26574 . + . ID=gene-AB11_RS09890;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AB11_RS09890;old_locus_tag=AB11_1680 NZ_JHDH01000115.1 Protein Homology CDS 25321 26574 . + 0 ID=cds-WP_000091828.1;Parent=gene-AB11_RS09890;Dbxref=GenBank:WP_000091828.1;Name=WP_000091828.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310329.1;locus_tag=AB11_RS09890;product=MFS transporter;protein_id=WP_000091828.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 26624 26743 . - . ID=gene-AB11_RS26060;Name=AB11_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26060;old_locus_tag=AB11_1681 NZ_JHDH01000115.1 Protein Homology CDS 26624 26743 . - 0 ID=cds-WP_001299090.1;Parent=gene-AB11_RS26060;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AB11_RS26060;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 26999 27307 . + . ID=gene-AB11_RS09895;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AB11_RS09895;old_locus_tag=AB11_1682 NZ_JHDH01000115.1 Protein Homology CDS 26999 27307 . + 0 ID=cds-WP_001556621.1;Parent=gene-AB11_RS09895;Dbxref=GenBank:WP_001556621.1;Name=WP_001556621.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=AB11_RS09895;product=acid resistance repetitive basic protein Asr;protein_id=WP_001556621.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 27400 27483 . + . ID=gene-AB11_RS09900;Name=AB11_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS09900 NZ_JHDH01000115.1 Protein Homology CDS 27400 27483 . + 0 ID=cds-WP_000233090.1;Parent=gene-AB11_RS09900;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AB11_RS09900;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 27583 28404 . + . ID=gene-AB11_RS09905;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AB11_RS09905;old_locus_tag=AB11_1683 NZ_JHDH01000115.1 Protein Homology CDS 27583 28404 . + 0 ID=cds-WP_001260835.1;Parent=gene-AB11_RS09905;Dbxref=GenBank:WP_001260835.1;Name=WP_001260835.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310331.2;locus_tag=AB11_RS09905;product=trypsin-like serine peptidase;protein_id=WP_001260835.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 28443 28772 . - . ID=gene-AB11_RS09910;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AB11_RS09910;old_locus_tag=AB11_1684 NZ_JHDH01000115.1 Protein Homology CDS 28443 28772 . - 0 ID=cds-WP_000046661.1;Parent=gene-AB11_RS09910;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AB11_RS09910;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 28759 29124 . - . ID=gene-AB11_RS09915;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AB11_RS09915;old_locus_tag=AB11_1685 NZ_JHDH01000115.1 Protein Homology CDS 28759 29124 . - 0 ID=cds-WP_000276149.1;Parent=gene-AB11_RS09915;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AB11_RS09915;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 29231 29401 . - . ID=gene-AB11_RS26235;Name=AB11_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26235 NZ_JHDH01000115.1 Protein Homology CDS 29231 29401 . - 0 ID=cds-WP_001303517.1;Parent=gene-AB11_RS26235;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AB11_RS26235;product=protein YdgV;protein_id=WP_001303517.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 29536 30570 . + . ID=gene-AB11_RS09920;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AB11_RS09920;old_locus_tag=AB11_1686 NZ_JHDH01000115.1 Protein Homology CDS 29536 30570 . + 0 ID=cds-WP_001118241.1;Parent=gene-AB11_RS09920;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AB11_RS09920;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 30595 31983 . - . ID=gene-AB11_RS09925;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AB11_RS09925;old_locus_tag=AB11_1687 NZ_JHDH01000115.1 Protein Homology CDS 30595 31983 . - 0 ID=cds-WP_000014036.1;Parent=gene-AB11_RS09925;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AB11_RS09925;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 31994 33526 . - . ID=gene-AB11_RS09930;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AB11_RS09930;old_locus_tag=AB11_1688 NZ_JHDH01000115.1 Protein Homology CDS 31994 33526 . - 0 ID=cds-WP_001295398.1;Parent=gene-AB11_RS09930;Dbxref=GenBank:WP_001295398.1;Name=WP_001295398.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AB11_RS09930;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001295398.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 34050 34994 . + . ID=gene-AB11_RS09935;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AB11_RS09935;old_locus_tag=AB11_1689 NZ_JHDH01000115.1 Protein Homology CDS 34050 34994 . + 0 ID=cds-WP_000769322.1;Parent=gene-AB11_RS09935;Dbxref=GenBank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AB11_RS09935;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 35180 36562 . + . ID=gene-AB11_RS09940;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AB11_RS09940;old_locus_tag=AB11_1690 NZ_JHDH01000115.1 Protein Homology CDS 35180 36562 . + 0 ID=cds-WP_000412379.1;Parent=gene-AB11_RS09940;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AB11_RS09940;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 36599 37321 . + . ID=gene-AB11_RS09945;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AB11_RS09945;old_locus_tag=AB11_1691 NZ_JHDH01000115.1 Protein Homology CDS 36599 37321 . + 0 ID=cds-WP_000520804.1;Parent=gene-AB11_RS09945;Dbxref=GenBank:WP_000520804.1;Name=WP_000520804.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AB11_RS09945;product=dihydromonapterin reductase;protein_id=WP_000520804.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 37318 37653 . - . ID=gene-AB11_RS09950;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AB11_RS09950;old_locus_tag=AB11_1692 NZ_JHDH01000115.1 Protein Homology CDS 37318 37653 . - 0 ID=cds-WP_000524868.1;Parent=gene-AB11_RS09950;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AB11_RS09950;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 37782 38501 . + . ID=gene-AB11_RS09955;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AB11_RS09955;old_locus_tag=AB11_1693 NZ_JHDH01000115.1 Protein Homology CDS 37782 38501 . + 0 ID=cds-WP_001092508.1;Parent=gene-AB11_RS09955;Dbxref=GenBank:WP_001092508.1;Name=WP_001092508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AB11_RS09955;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 38505 39806 . + . ID=gene-AB11_RS09960;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AB11_RS09960;old_locus_tag=AB11_1694 NZ_JHDH01000115.1 Protein Homology CDS 38505 39806 . + 0 ID=cds-WP_000732510.1;Parent=gene-AB11_RS09960;Dbxref=GenBank:WP_000732510.1;Name=WP_000732510.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AB11_RS09960;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732510.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 39882 40811 . + . ID=gene-AB11_RS09965;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AB11_RS09965;old_locus_tag=AB11_1695 NZ_JHDH01000115.1 Protein Homology CDS 39882 40811 . + 0 ID=cds-WP_032223350.1;Parent=gene-AB11_RS09965;Dbxref=GenBank:WP_032223350.1;Name=WP_032223350.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AB11_RS09965;product=DNA replication terminus site-binding protein;protein_id=WP_032223350.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 40808 42211 . - . ID=gene-AB11_RS09970;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AB11_RS09970;old_locus_tag=AB11_1696 NZ_JHDH01000115.1 Protein Homology CDS 40808 42211 . - 0 ID=cds-WP_001099085.1;Parent=gene-AB11_RS09970;Dbxref=GenBank:WP_001099085.1;Name=WP_001099085.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416128.1;locus_tag=AB11_RS09970;product=class II fumarate hydratase;protein_id=WP_001099085.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 42354 44000 . - . ID=gene-AB11_RS09975;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB11_RS09975;old_locus_tag=AB11_1697 NZ_JHDH01000115.1 Protein Homology CDS 42354 44000 . - 0 ID=cds-WP_032223352.1;Parent=gene-AB11_RS09975;Dbxref=GenBank:WP_032223352.1;Name=WP_032223352.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AB11_RS09975;product=class I fumarate hydratase;protein_id=WP_032223352.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 44199 45374 . + . ID=gene-AB11_RS09980;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AB11_RS09980;old_locus_tag=AB11_1698 NZ_JHDH01000115.1 Protein Homology CDS 44199 45374 . + 0 ID=cds-WP_001170664.1;Parent=gene-AB11_RS09980;Dbxref=GenBank:WP_001170664.1;Name=WP_001170664.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AB11_RS09980;product=mannose-6-phosphate isomerase;protein_id=WP_001170664.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 45475 46983 . + . ID=gene-AB11_RS09985;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AB11_RS09985;old_locus_tag=AB11_1699 NZ_JHDH01000115.1 Protein Homology CDS 45475 46983 . + 0 ID=cds-WP_021570801.1;Parent=gene-AB11_RS09985;Dbxref=GenBank:WP_021570801.1;Name=WP_021570801.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AB11_RS09985;product=YdgA family protein;protein_id=WP_021570801.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 47209 48474 . - . ID=gene-AB11_RS09990;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AB11_RS09990;old_locus_tag=AB11_1700 NZ_JHDH01000115.1 Protein Homology CDS 47209 48474 . - 0 ID=cds-WP_021570802.1;Parent=gene-AB11_RS09990;Dbxref=GenBank:WP_021570802.1;Name=WP_021570802.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AB11_RS09990;product=glucuronide uptake porin UidC;protein_id=WP_021570802.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 48513 49886 . - . ID=gene-AB11_RS09995;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AB11_RS09995;old_locus_tag=AB11_1701 NZ_JHDH01000115.1 Protein Homology CDS 48513 49886 . - 0 ID=cds-WP_001075863.1;Parent=gene-AB11_RS09995;Dbxref=GenBank:WP_001075863.1;Name=WP_001075863.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AB11_RS09995;product=glucuronide transporter;protein_id=WP_001075863.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 49883 51694 . - . ID=gene-AB11_RS10000;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AB11_RS10000;old_locus_tag=AB11_1702 NZ_JHDH01000115.1 Protein Homology CDS 49883 51694 . - 0 ID=cds-WP_000945878.1;Parent=gene-AB11_RS10000;Dbxref=GenBank:WP_000945878.1;Name=WP_000945878.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AB11_RS10000;product=beta-glucuronidase;protein_id=WP_000945878.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 52085 52675 . - . ID=gene-AB11_RS10005;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AB11_RS10005;old_locus_tag=AB11_1703 NZ_JHDH01000115.1 Protein Homology CDS 52085 52675 . - 0 ID=cds-WP_000969092.1;Parent=gene-AB11_RS10005;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AB11_RS10005;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 52896 53663 . - . ID=gene-AB11_RS10010;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AB11_RS10010;old_locus_tag=AB11_1704 NZ_JHDH01000115.1 Protein Homology CDS 52896 53663 . - 0 ID=cds-WP_000483353.1;Parent=gene-AB11_RS10010;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AB11_RS10010;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 53775 54803 . - . ID=gene-AB11_RS10015;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AB11_RS10015;old_locus_tag=AB11_1705 NZ_JHDH01000115.1 Protein Homology CDS 53775 54803 . - 0 ID=cds-WP_000179510.1;Parent=gene-AB11_RS10015;Dbxref=GenBank:WP_000179510.1;Name=WP_000179510.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AB11_RS10015;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179510.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 54978 56570 . + . ID=gene-AB11_RS10020;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AB11_RS10020;old_locus_tag=AB11_1706 NZ_JHDH01000115.1 Protein Homology CDS 54978 56570 . + 0 ID=cds-WP_000125583.1;Parent=gene-AB11_RS10020;Dbxref=GenBank:WP_000125583.1;Name=WP_000125583.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AB11_RS10020;product=PTS maltose transporter subunit IICB;protein_id=WP_000125583.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 56580 57752 . + . ID=gene-AB11_RS10025;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AB11_RS10025;old_locus_tag=AB11_1707 NZ_JHDH01000115.1 Protein Homology CDS 56580 57752 . + 0 ID=cds-WP_000459379.1;Parent=gene-AB11_RS10025;Dbxref=GenBank:WP_000459379.1;Name=WP_000459379.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AB11_RS10025;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459379.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 57856 58857 . + . ID=gene-AB11_RS10030;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AB11_RS10030;old_locus_tag=AB11_1708 NZ_JHDH01000115.1 Protein Homology CDS 57856 58857 . + 0 ID=cds-WP_000567490.1;Parent=gene-AB11_RS10030;Dbxref=GenBank:WP_000567490.1;Name=WP_000567490.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AB11_RS10030;product=adenosine deaminase;protein_id=WP_000567490.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 58891 59931 . - . ID=gene-AB11_RS10035;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AB11_RS10035;old_locus_tag=AB11_1709 NZ_JHDH01000115.1 Protein Homology CDS 58891 59931 . - 0 ID=cds-WP_032223354.1;Parent=gene-AB11_RS10035;Dbxref=GenBank:WP_032223354.1;Name=WP_032223354.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AB11_RS10035;product=oxidoreductase;protein_id=WP_032223354.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 60174 60299 . + . ID=gene-AB11_RS10040;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AB11_RS10040 NZ_JHDH01000115.1 Protein Homology CDS 60174 60299 . + 0 ID=cds-WP_001300888.1;Parent=gene-AB11_RS10040;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AB11_RS10040;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 60572 60787 . + . ID=gene-AB11_RS10045;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AB11_RS10045;old_locus_tag=AB11_1710 NZ_JHDH01000115.1 Protein Homology CDS 60572 60787 . + 0 ID=cds-WP_000217950.1;Parent=gene-AB11_RS10045;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AB11_RS10045;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 60873 61313 . + . ID=gene-AB11_RS10050;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AB11_RS10050;old_locus_tag=AB11_1711 NZ_JHDH01000115.1 Protein Homology CDS 60873 61313 . + 0 ID=cds-WP_001310854.1;Parent=gene-AB11_RS10050;Dbxref=GenBank:WP_001310854.1;Name=WP_001310854.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416143.2;locus_tag=AB11_RS10050;product=DUF2569 domain-containing protein;protein_id=WP_001310854.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 61390 61971 . + . ID=gene-AB11_RS10055;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AB11_RS10055;old_locus_tag=AB11_1712 NZ_JHDH01000115.1 Protein Homology CDS 61390 61971 . + 0 ID=cds-WP_000133193.1;Parent=gene-AB11_RS10055;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AB11_RS10055;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 61971 62549 . + . ID=gene-AB11_RS10060;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AB11_RS10060;old_locus_tag=AB11_1713 NZ_JHDH01000115.1 Protein Homology CDS 61971 62549 . + 0 ID=cds-WP_000991805.1;Parent=gene-AB11_RS10060;Dbxref=GenBank:WP_000991805.1;Name=WP_000991805.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AB11_RS10060;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 62542 64668 . + . ID=gene-AB11_RS10065;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AB11_RS10065;old_locus_tag=AB11_1714 NZ_JHDH01000115.1 Protein Homology CDS 62542 64668 . + 0 ID=cds-WP_000915784.1;Parent=gene-AB11_RS10065;Dbxref=GenBank:WP_000915784.1;Name=WP_000915784.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AB11_RS10065;product=electron transport complex subunit RsxC;protein_id=WP_000915784.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 64669 65727 . + . ID=gene-AB11_RS10070;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AB11_RS10070;old_locus_tag=AB11_1715 NZ_JHDH01000115.1 Protein Homology CDS 64669 65727 . + 0 ID=cds-WP_000231927.1;Parent=gene-AB11_RS10070;Dbxref=GenBank:WP_000231927.1;Name=WP_000231927.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AB11_RS10070;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 65731 66351 . + . ID=gene-AB11_RS10075;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AB11_RS10075;old_locus_tag=AB11_1716 NZ_JHDH01000115.1 Protein Homology CDS 65731 66351 . + 0 ID=cds-WP_000920784.1;Parent=gene-AB11_RS10075;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AB11_RS10075;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 66355 67050 . + . ID=gene-AB11_RS10080;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AB11_RS10080;old_locus_tag=AB11_1717 NZ_JHDH01000115.1 Protein Homology CDS 66355 67050 . + 0 ID=cds-WP_001289652.1;Parent=gene-AB11_RS10080;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AB11_RS10080;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 67050 67685 . + . ID=gene-AB11_RS10085;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AB11_RS10085;old_locus_tag=AB11_1718 NZ_JHDH01000115.1 Protein Homology CDS 67050 67685 . + 0 ID=cds-WP_001373638.1;Parent=gene-AB11_RS10085;Dbxref=GenBank:WP_001373638.1;Name=WP_001373638.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AB11_RS10085;product=endonuclease III;protein_id=WP_001373638.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 68296 69798 . + . ID=gene-AB11_RS10090;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AB11_RS10090;old_locus_tag=AB11_1719 NZ_JHDH01000115.1 Protein Homology CDS 68296 69798 . + 0 ID=cds-WP_000100932.1;Parent=gene-AB11_RS10090;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AB11_RS10090;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 69904 70509 . + . ID=gene-AB11_RS10095;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AB11_RS10095;old_locus_tag=AB11_1720 NZ_JHDH01000115.1 Protein Homology CDS 69904 70509 . + 0 ID=cds-WP_000765749.1;Parent=gene-AB11_RS10095;Dbxref=GenBank:WP_000765749.1;Name=WP_000765749.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AB11_RS10095;product=glutathione transferase GstA;protein_id=WP_000765749.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 70553 71416 . - . ID=gene-AB11_RS10100;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AB11_RS10100;old_locus_tag=AB11_1721 NZ_JHDH01000115.1 Protein Homology CDS 70553 71416 . - 0 ID=cds-WP_001307229.1;Parent=gene-AB11_RS10100;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AB11_RS10100;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 71475 72749 . - . ID=gene-AB11_RS10105;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AB11_RS10105;old_locus_tag=AB11_1722 NZ_JHDH01000115.1 Protein Homology CDS 71475 72749 . - 0 ID=cds-WP_001295400.1;Parent=gene-AB11_RS10105;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AB11_RS10105;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 72878 73534 . - . ID=gene-AB11_RS10110;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AB11_RS10110;old_locus_tag=AB11_1723 NZ_JHDH01000115.1 Protein Homology CDS 72878 73534 . - 0 ID=cds-WP_001282319.1;Parent=gene-AB11_RS10110;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AB11_RS10110;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 73593 73922 . - . ID=gene-AB11_RS10115;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AB11_RS10115;old_locus_tag=AB11_1724 NZ_JHDH01000115.1 Protein Homology CDS 73593 73922 . - 0 ID=cds-WP_000178044.1;Parent=gene-AB11_RS10115;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AB11_RS10115;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 74020 75129 . - . ID=gene-AB11_RS10120;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AB11_RS10120;old_locus_tag=AB11_1725 NZ_JHDH01000115.1 Protein Homology CDS 74020 75129 . - 0 ID=cds-WP_000835077.1;Parent=gene-AB11_RS10120;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AB11_RS10120;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 75403 75870 . + . ID=gene-AB11_RS10125;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AB11_RS10125;old_locus_tag=AB11_1726 NZ_JHDH01000115.1 Protein Homology CDS 75403 75870 . + 0 ID=cds-WP_000597196.1;Parent=gene-AB11_RS10125;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AB11_RS10125;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 75917 76351 . - . ID=gene-AB11_RS10130;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AB11_RS10130;old_locus_tag=AB11_1727 NZ_JHDH01000115.1 Protein Homology CDS 75917 76351 . - 0 ID=cds-WP_001296943.1;Parent=gene-AB11_RS10130;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AB11_RS10130;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 76552 76788 . + . ID=gene-AB11_RS10135;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AB11_RS10135 NZ_JHDH01000115.1 Protein Homology CDS 76552 76788 . + 0 ID=cds-WP_021570804.1;Parent=gene-AB11_RS10135;Dbxref=GenBank:WP_021570804.1;Name=WP_021570804.1;gbkey=CDS;gene=ydhI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AB11_RS10135;product=DUF1656 domain-containing protein;protein_id=WP_021570804.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 76791 77648 . + . ID=gene-AB11_RS10140;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AB11_RS10140;old_locus_tag=AB11_1730 NZ_JHDH01000115.1 Protein Homology CDS 76791 77648 . + 0 ID=cds-WP_001300356.1;Parent=gene-AB11_RS10140;Dbxref=GenBank:WP_001300356.1;Name=WP_001300356.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AB11_RS10140;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001300356.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 77648 79660 . + . ID=gene-AB11_RS10145;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AB11_RS10145;old_locus_tag=AB11_1731 NZ_JHDH01000115.1 Protein Homology CDS 77648 79660 . + 0 ID=cds-WP_000994333.1;Parent=gene-AB11_RS10145;Dbxref=GenBank:WP_000994333.1;Name=WP_000994333.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AB11_RS10145;product=FUSC family protein;protein_id=WP_000994333.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 79661 80182 . - . ID=gene-AB11_RS10150;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AB11_RS10150;old_locus_tag=AB11_1732 NZ_JHDH01000115.1 Protein Homology CDS 79661 80182 . - 0 ID=cds-WP_001296937.1;Parent=gene-AB11_RS10150;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AB11_RS10150;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 80263 81159 . - . ID=gene-AB11_RS10155;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AB11_RS10155;old_locus_tag=AB11_1733 NZ_JHDH01000115.1 Protein Homology CDS 80263 81159 . - 0 ID=cds-WP_000250656.1;Parent=gene-AB11_RS10155;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AB11_RS10155;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 81208 81447 . - . ID=gene-AB11_RS10160;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AB11_RS10160 NZ_JHDH01000115.1 Protein Homology CDS 81208 81447 . - 0 ID=cds-WP_000840481.1;Parent=gene-AB11_RS10160;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AB11_RS10160;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 81550 82149 . + . ID=gene-AB11_RS10165;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AB11_RS10165;old_locus_tag=AB11_1735 NZ_JHDH01000115.1 Protein Homology CDS 81550 82149 . + 0 ID=cds-WP_001032936.1;Parent=gene-AB11_RS10165;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AB11_RS10165;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 82186 83283 . + . ID=gene-AB11_RS10170;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AB11_RS10170;old_locus_tag=AB11_1736 NZ_JHDH01000115.1 Protein Homology CDS 82186 83283 . + 0 ID=cds-WP_000093589.1;Parent=gene-AB11_RS10170;Dbxref=GenBank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AB11_RS10170;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 83364 83771 . + . ID=gene-AB11_RS10175;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AB11_RS10175;old_locus_tag=AB11_1737 NZ_JHDH01000115.1 Protein Homology CDS 83364 83771 . + 0 ID=cds-WP_001237796.1;Parent=gene-AB11_RS10175;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AB11_RS10175;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 83874 84521 . + . ID=gene-AB11_RS10180;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AB11_RS10180;old_locus_tag=AB11_1738 NZ_JHDH01000115.1 Protein Homology CDS 83874 84521 . + 0 ID=cds-WP_001282283.1;Parent=gene-AB11_RS10180;Dbxref=GenBank:WP_001282283.1;Name=WP_001282283.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416169.1;locus_tag=AB11_RS10180;product=ribonuclease T;protein_id=WP_001282283.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 84614 89230 . + . ID=gene-AB11_RS10185;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AB11_RS10185;old_locus_tag=AB11_1739 NZ_JHDH01000115.1 Protein Homology CDS 84614 89230 . + 0 ID=cds-WP_001310858.1;Parent=gene-AB11_RS10185;Dbxref=GenBank:WP_001310858.1;Name=WP_001310858.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AB11_RS10185;product=ATP-dependent helicase;protein_id=WP_001310858.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 89281 89628 . - . ID=gene-AB11_RS10190;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AB11_RS10190;old_locus_tag=AB11_1740 NZ_JHDH01000115.1 Protein Homology CDS 89281 89628 . - 0 ID=cds-WP_021570806.1;Parent=gene-AB11_RS10190;Dbxref=GenBank:WP_021570806.1;Name=WP_021570806.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AB11_RS10190;product=monothiol glutaredoxin 4;protein_id=WP_021570806.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 89710 89862 . - . ID=gene-AB11_RS25215;Name=AB11_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25215;old_locus_tag=AB11_1741 NZ_JHDH01000115.1 Protein Homology CDS 89710 89862 . - 0 ID=cds-WP_001299740.1;Parent=gene-AB11_RS25215;Dbxref=GenBank:WP_001299740.1;Name=WP_001299740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001299740.1;locus_tag=AB11_RS25215;product=hypothetical protein;protein_id=WP_001299740.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 89962 90777 . + . ID=gene-AB11_RS10195;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AB11_RS10195;old_locus_tag=AB11_1742 NZ_JHDH01000115.1 Protein Homology CDS 89962 90777 . + 0 ID=cds-WP_032223356.1;Parent=gene-AB11_RS10195;Dbxref=GenBank:WP_032223356.1;Name=WP_032223356.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AB11_RS10195;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_032223356.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 90905 91486 . + . ID=gene-AB11_RS10200;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AB11_RS10200;old_locus_tag=AB11_1743 NZ_JHDH01000115.1 Protein Homology CDS 90905 91486 . + 0 ID=cds-WP_000007283.1;Parent=gene-AB11_RS10200;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AB11_RS10200;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 91721 92890 . - . ID=gene-AB11_RS10205;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AB11_RS10205;old_locus_tag=AB11_1744 NZ_JHDH01000115.1 Protein Homology CDS 91721 92890 . - 0 ID=cds-WP_000701040.1;Parent=gene-AB11_RS10205;Dbxref=GenBank:WP_000701040.1;Name=WP_000701040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AB11_RS10205;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 93056 93145 . - . ID=gene-AB11_RS10210;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AB11_RS10210;old_locus_tag=AB11_1745 NZ_JHDH01000115.1 Protein Homology CDS 93056 93145 . - 0 ID=cds-WP_000102278.1;Parent=gene-AB11_RS10210;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AB11_RS10210;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 93444 94469 . + . ID=gene-AB11_RS10215;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AB11_RS10215;old_locus_tag=AB11_1746 NZ_JHDH01000115.1 Protein Homology CDS 93444 94469 . + 0 ID=cds-WP_021570807.1;Parent=gene-AB11_RS10215;Dbxref=GenBank:WP_021570807.1;Name=WP_021570807.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AB11_RS10215;product=HTH-type transcriptional repressor PurR;protein_id=WP_021570807.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 94466 95398 . - . ID=gene-AB11_RS10220;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AB11_RS10220;old_locus_tag=AB11_1747 NZ_JHDH01000115.1 Protein Homology CDS 94466 95398 . - 0 ID=cds-WP_000269501.1;Parent=gene-AB11_RS10220;Dbxref=GenBank:WP_000269501.1;Name=WP_000269501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AB11_RS10220;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269501.1;transl_table=11 NZ_JHDH01000115.1 RefSeq gene 95511 96519 . + . ID=gene-AB11_RS10225;Name=punC;end_range=96519,.;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AB11_RS10225;old_locus_tag=AB11_1748;partial=true NZ_JHDH01000115.1 Protein Homology CDS 95511 96519 . + 0 ID=cds-WP_032218730.1;Parent=gene-AB11_RS10225;Dbxref=GenBank:WP_032218730.1;Name=WP_032218730.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;end_range=96519,.;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AB11_RS10225;partial=true;product=purine nucleoside transporter PunC;protein_id=WP_032218730.1;transl_table=11 ##sequence-region NZ_JHDH01000116.1 1 168990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000116.1 RefSeq region 1 168990 . + . ID=NZ_JHDH01000116.1:1..168990;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000116.1 RefSeq gene 1 133 . - . ID=gene-AB11_RS10230;Name=AB11_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS10230;old_locus_tag=AB11_1749;partial=true;start_range=.,1 NZ_JHDH01000116.1 Protein Homology CDS 1 133 . - 0 ID=cds-WP_001322164.1;Parent=gene-AB11_RS10230;Dbxref=GenBank:WP_001322164.1;Name=WP_001322164.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707559.1;locus_tag=AB11_RS10230;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001322164.1;start_range=.,1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 246 1457 . + . ID=gene-AB11_RS10235;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AB11_RS10235;old_locus_tag=AB11_1750 NZ_JHDH01000116.1 Protein Homology CDS 246 1457 . + 0 ID=cds-WP_001182363.1-2;Parent=gene-AB11_RS10235;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AB11_RS10235;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 1748 2896 . + . ID=gene-AB11_RS10240;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AB11_RS10240;old_locus_tag=AB11_1751 NZ_JHDH01000116.1 Protein Homology CDS 1748 2896 . + 0 ID=cds-WP_000098896.1;Parent=gene-AB11_RS10240;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AB11_RS10240;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 2936 3577 . - . ID=gene-AB11_RS10245;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AB11_RS10245;old_locus_tag=AB11_1752 NZ_JHDH01000116.1 Protein Homology CDS 2936 3577 . - 0 ID=cds-WP_000493947.1;Parent=gene-AB11_RS10245;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AB11_RS10245;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 3792 5165 . + . ID=gene-AB11_RS10250;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AB11_RS10250;old_locus_tag=AB11_1753 NZ_JHDH01000116.1 Protein Homology CDS 3792 5165 . + 0 ID=cds-WP_001394334.1;Parent=gene-AB11_RS10250;Dbxref=GenBank:WP_001394334.1;Name=WP_001394334.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AB11_RS10250;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001394334.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 5206 6462 . - . ID=gene-AB11_RS10255;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AB11_RS10255;old_locus_tag=AB11_1754 NZ_JHDH01000116.1 Protein Homology CDS 5206 6462 . - 0 ID=cds-WP_000534271.1;Parent=gene-AB11_RS10255;Dbxref=GenBank:WP_000534271.1;Name=WP_000534271.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AB11_RS10255;product=AIDA repeat-containing protein;protein_id=WP_000534271.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 6770 6846 . + . ID=gene-AB11_RS10260;Name=AB11_RS10260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS10260;old_locus_tag=AB11_1755 NZ_JHDH01000116.1 tRNAscan-SE tRNA 6770 6846 . + . ID=rna-AB11_RS10260;Parent=gene-AB11_RS10260;anticodon=(pos:6804..6806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS10260;product=tRNA-Val NZ_JHDH01000116.1 tRNAscan-SE exon 6770 6846 . + . ID=exon-AB11_RS10260-1;Parent=rna-AB11_RS10260;anticodon=(pos:6804..6806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS10260;product=tRNA-Val NZ_JHDH01000116.1 RefSeq gene 6851 6927 . + . ID=gene-AB11_RS10265;Name=AB11_RS10265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS10265;old_locus_tag=AB11_1756 NZ_JHDH01000116.1 tRNAscan-SE tRNA 6851 6927 . + . ID=rna-AB11_RS10265;Parent=gene-AB11_RS10265;anticodon=(pos:6885..6887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS10265;product=tRNA-Val NZ_JHDH01000116.1 tRNAscan-SE exon 6851 6927 . + . ID=exon-AB11_RS10265-1;Parent=rna-AB11_RS10265;anticodon=(pos:6885..6887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS10265;product=tRNA-Val NZ_JHDH01000116.1 RefSeq gene 7035 7340 . + . ID=gene-AB11_RS10270;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AB11_RS10270;old_locus_tag=AB11_1757 NZ_JHDH01000116.1 Protein Homology CDS 7035 7340 . + 0 ID=cds-WP_000212657.1;Parent=gene-AB11_RS10270;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AB11_RS10270;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 7466 9070 . + . ID=gene-AB11_RS10275;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AB11_RS10275;old_locus_tag=AB11_1758 NZ_JHDH01000116.1 Protein Homology CDS 7466 9070 . + 0 ID=cds-WP_032223364.1;Parent=gene-AB11_RS10275;Dbxref=GenBank:WP_032223364.1;Name=WP_032223364.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AB11_RS10275;product=FAD-NAD(P)-binding protein;protein_id=WP_032223364.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 9082 9894 . - . ID=gene-AB11_RS10280;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AB11_RS10280;old_locus_tag=AB11_1759 NZ_JHDH01000116.1 Protein Homology CDS 9082 9894 . - 0 ID=cds-WP_000587525.1;Parent=gene-AB11_RS10280;Dbxref=GenBank:WP_000587525.1;Name=WP_000587525.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AB11_RS10280;product=protein YdhT;protein_id=WP_000587525.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 9898 10683 . - . ID=gene-AB11_RS10285;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AB11_RS10285;old_locus_tag=AB11_1760 NZ_JHDH01000116.1 Protein Homology CDS 9898 10683 . - 0 ID=cds-WP_001069979.1;Parent=gene-AB11_RS10285;Dbxref=GenBank:WP_001069979.1;Name=WP_001069979.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AB11_RS10285;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069979.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 10680 11348 . - . ID=gene-AB11_RS10290;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AB11_RS10290;old_locus_tag=AB11_1761 NZ_JHDH01000116.1 Protein Homology CDS 10680 11348 . - 0 ID=cds-WP_001310861.1;Parent=gene-AB11_RS10290;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AB11_RS10290;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 11412 12050 . - . ID=gene-AB11_RS10295;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AB11_RS10295;old_locus_tag=AB11_1762 NZ_JHDH01000116.1 Protein Homology CDS 11412 12050 . - 0 ID=cds-WP_001301419.1;Parent=gene-AB11_RS10295;Dbxref=GenBank:WP_001301419.1;Name=WP_001301419.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AB11_RS10295;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001301419.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 12063 14165 . - . ID=gene-AB11_RS10300;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AB11_RS10300;old_locus_tag=AB11_1763 NZ_JHDH01000116.1 Protein Homology CDS 12063 14165 . - 0 ID=cds-WP_001273527.1;Parent=gene-AB11_RS10300;Dbxref=GenBank:WP_001273527.1;Name=WP_001273527.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AB11_RS10300;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 14186 14812 . - . ID=gene-AB11_RS10305;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AB11_RS10305;old_locus_tag=AB11_1764 NZ_JHDH01000116.1 Protein Homology CDS 14186 14812 . - 0 ID=cds-WP_001070230.1;Parent=gene-AB11_RS10305;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AB11_RS10305;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 15267 15476 . - . ID=gene-AB11_RS10310;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AB11_RS10310;old_locus_tag=AB11_1766 NZ_JHDH01000116.1 Protein Homology CDS 15267 15476 . - 0 ID=cds-WP_000528342.1;Parent=gene-AB11_RS10310;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AB11_RS10310;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 15831 16025 . + . ID=gene-AB11_RS25555;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=AB11_RS25555 NZ_JHDH01000116.1 Protein Homology CDS 15831 16025 . + 0 ID=cds-WP_240806354.1;Parent=gene-AB11_RS25555;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AB11_RS25555;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 16033 17445 . + . ID=gene-AB11_RS10315;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AB11_RS10315;old_locus_tag=AB11_1767 NZ_JHDH01000116.1 Protein Homology CDS 16033 17445 . + 0 ID=cds-WP_001467249.1;Parent=gene-AB11_RS10315;Dbxref=GenBank:WP_001467249.1;Name=WP_001467249.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AB11_RS10315;product=pyruvate kinase PykF;protein_id=WP_001467249.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 17756 17992 . + . ID=gene-AB11_RS10320;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AB11_RS10320;old_locus_tag=AB11_1768 NZ_JHDH01000116.1 Protein Homology CDS 17756 17992 . + 0 ID=cds-WP_000648420.1;Parent=gene-AB11_RS10320;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AB11_RS10320;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 18055 19059 . - . ID=gene-AB11_RS10325;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AB11_RS10325;old_locus_tag=AB11_1769 NZ_JHDH01000116.1 Protein Homology CDS 18055 19059 . - 0 ID=cds-WP_000817105.1;Parent=gene-AB11_RS10325;Dbxref=GenBank:WP_000817105.1;Name=WP_000817105.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AB11_RS10325;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817105.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 19208 19624 . - . ID=gene-AB11_RS10330;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AB11_RS10330;old_locus_tag=AB11_1770 NZ_JHDH01000116.1 Protein Homology CDS 19208 19624 . - 0 ID=cds-WP_001196530.1;Parent=gene-AB11_RS10330;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AB11_RS10330;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 19637 20857 . - . ID=gene-AB11_RS10335;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AB11_RS10335;old_locus_tag=AB11_1771 NZ_JHDH01000116.1 Protein Homology CDS 19637 20857 . - 0 ID=cds-WP_000577988.1;Parent=gene-AB11_RS10335;Dbxref=GenBank:WP_000577988.1;Name=WP_000577988.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416195.1;locus_tag=AB11_RS10335;product=cysteine desulfurase SufS;protein_id=WP_000577988.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 20854 22125 . - . ID=gene-AB11_RS10340;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AB11_RS10340;old_locus_tag=AB11_1772 NZ_JHDH01000116.1 Protein Homology CDS 20854 22125 . - 0 ID=cds-WP_000907979.1;Parent=gene-AB11_RS10340;Dbxref=GenBank:WP_000907979.1;Name=WP_000907979.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416196.1;locus_tag=AB11_RS10340;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907979.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 22100 22846 . - . ID=gene-AB11_RS10345;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AB11_RS10345;old_locus_tag=AB11_1773 NZ_JHDH01000116.1 Protein Homology CDS 22100 22846 . - 0 ID=cds-WP_000948863.1;Parent=gene-AB11_RS10345;Dbxref=GenBank:WP_000948863.1;Name=WP_000948863.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AB11_RS10345;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 22856 24343 . - . ID=gene-AB11_RS10350;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AB11_RS10350;old_locus_tag=AB11_1774 NZ_JHDH01000116.1 Protein Homology CDS 22856 24343 . - 0 ID=cds-WP_000089364.1;Parent=gene-AB11_RS10350;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AB11_RS10350;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 24352 24720 . - . ID=gene-AB11_RS10355;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AB11_RS10355;old_locus_tag=AB11_1775 NZ_JHDH01000116.1 Protein Homology CDS 24352 24720 . - 0 ID=cds-WP_000367160.1;Parent=gene-AB11_RS10355;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AB11_RS10355;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 25268 25456 . - . ID=gene-AB11_RS10360;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AB11_RS10360;old_locus_tag=AB11_1776 NZ_JHDH01000116.1 Protein Homology CDS 25268 25456 . - 0 ID=cds-WP_001296104.1;Parent=gene-AB11_RS10360;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AB11_RS10360;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 25556 25966 . - . ID=gene-AB11_RS10365;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AB11_RS10365;old_locus_tag=AB11_1777 NZ_JHDH01000116.1 Protein Homology CDS 25556 25966 . - 0 ID=cds-WP_000637982.1;Parent=gene-AB11_RS10365;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AB11_RS10365;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 25963 29019 . - . ID=gene-AB11_RS10370;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AB11_RS10370;old_locus_tag=AB11_1778 NZ_JHDH01000116.1 Protein Homology CDS 25963 29019 . - 0 ID=cds-WP_021570808.1;Parent=gene-AB11_RS10370;Dbxref=GenBank:WP_021570808.1;Name=WP_021570808.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AB11_RS10370;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_021570808.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 29408 30520 . + . ID=gene-AB11_RS10375;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AB11_RS10375;old_locus_tag=AB11_1779 NZ_JHDH01000116.1 Protein Homology CDS 29408 30520 . + 0 ID=cds-WP_032223368.1;Parent=gene-AB11_RS10375;Dbxref=GenBank:WP_032223368.1;Name=WP_032223368.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AB11_RS10375;product=AI-2E family transporter YdiK;protein_id=WP_032223368.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 30706 30813 . + . ID=gene-AB11_RS10380;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AB11_RS10380 NZ_JHDH01000116.1 cmsearch antisense_RNA 30706 30813 . + . ID=rna-AB11_RS10380;Parent=gene-AB11_RS10380;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS10380;product=antisense sRNA RprA NZ_JHDH01000116.1 cmsearch exon 30706 30813 . + . ID=exon-AB11_RS10380-1;Parent=rna-AB11_RS10380;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS10380;product=antisense sRNA RprA NZ_JHDH01000116.1 RefSeq gene 30949 31305 . + . ID=gene-AB11_RS10385;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AB11_RS10385;old_locus_tag=AB11_1780 NZ_JHDH01000116.1 Protein Homology CDS 30949 31305 . + 0 ID=cds-WP_001310864.1;Parent=gene-AB11_RS10385;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AB11_RS10385;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 31405 32619 . + . ID=gene-AB11_RS10390;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AB11_RS10390;old_locus_tag=AB11_1781 NZ_JHDH01000116.1 Protein Homology CDS 31405 32619 . + 0 ID=cds-WP_000795530.1;Parent=gene-AB11_RS10390;Dbxref=GenBank:WP_000795530.1;Name=WP_000795530.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AB11_RS10390;product=MFS transporter;protein_id=WP_000795530.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 32846 34111 . + . ID=gene-AB11_RS10395;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AB11_RS10395;old_locus_tag=AB11_1782 NZ_JHDH01000116.1 Protein Homology CDS 32846 34111 . + 0 ID=cds-WP_000081192.1;Parent=gene-AB11_RS10395;Dbxref=GenBank:WP_000081192.1;Name=WP_000081192.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416206.6;locus_tag=AB11_RS10395;product=MFS transporter;protein_id=WP_000081192.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 34123 34989 . + . ID=gene-AB11_RS10400;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AB11_RS10400;old_locus_tag=AB11_1783 NZ_JHDH01000116.1 Protein Homology CDS 34123 34989 . + 0 ID=cds-WP_000383469.1;Parent=gene-AB11_RS10400;Dbxref=GenBank:WP_000383469.1;Name=WP_000383469.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AB11_RS10400;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 35020 35778 . + . ID=gene-AB11_RS10405;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AB11_RS10405;old_locus_tag=AB11_1784 NZ_JHDH01000116.1 Protein Homology CDS 35020 35778 . + 0 ID=cds-WP_000860201.1;Parent=gene-AB11_RS10405;Dbxref=GenBank:WP_000860201.1;Name=WP_000860201.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AB11_RS10405;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860201.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 35921 37516 . + . ID=gene-AB11_RS10410;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AB11_RS10410;old_locus_tag=AB11_1785 NZ_JHDH01000116.1 Protein Homology CDS 35921 37516 . + 0 ID=cds-WP_000805700.1;Parent=gene-AB11_RS10410;Dbxref=GenBank:WP_000805700.1;Name=WP_000805700.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;gene=ydiF;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AB11_RS10410;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805700.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 37530 38681 . + . ID=gene-AB11_RS10415;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AB11_RS10415;old_locus_tag=AB11_1786 NZ_JHDH01000116.1 Protein Homology CDS 37530 38681 . + 0 ID=cds-WP_000347850.1;Parent=gene-AB11_RS10415;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AB11_RS10415;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 38724 39635 . - . ID=gene-AB11_RS10420;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=AB11_RS10420;old_locus_tag=AB11_1787 NZ_JHDH01000116.1 Protein Homology CDS 38724 39635 . - 0 ID=cds-WP_000284799.1;Parent=gene-AB11_RS10420;Dbxref=GenBank:WP_000284799.1;Name=WP_000284799.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416211.1;locus_tag=AB11_RS10420;product=AraC family transcriptional regulator;protein_id=WP_000284799.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 39951 40715 . + . ID=gene-AB11_RS10425;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AB11_RS10425;old_locus_tag=AB11_1789 NZ_JHDH01000116.1 Protein Homology CDS 39951 40715 . + 0 ID=cds-WP_000692135.1;Parent=gene-AB11_RS10425;Dbxref=GenBank:WP_000692135.1;Name=WP_000692135.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=AB11_RS10425;product=electron transfer flavoprotein;protein_id=WP_000692135.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 40735 41673 . + . ID=gene-AB11_RS10430;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AB11_RS10430;old_locus_tag=AB11_1790 NZ_JHDH01000116.1 Protein Homology CDS 40735 41673 . + 0 ID=cds-WP_032223371.1;Parent=gene-AB11_RS10430;Dbxref=GenBank:WP_032223371.1;Name=WP_032223371.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416213.1;locus_tag=AB11_RS10430;product=electron transfer flavoprotein subunit alpha;protein_id=WP_032223371.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 41729 43018 . + . ID=gene-AB11_RS10435;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AB11_RS10435;old_locus_tag=AB11_1791 NZ_JHDH01000116.1 Protein Homology CDS 41729 43018 . + 0 ID=cds-WP_001278525.1;Parent=gene-AB11_RS10435;Dbxref=GenBank:WP_001278525.1;Name=WP_001278525.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=AB11_RS10435;product=FAD-dependent oxidoreductase;protein_id=WP_001278525.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 43015 43308 . + . ID=gene-AB11_RS10440;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AB11_RS10440;old_locus_tag=AB11_1792 NZ_JHDH01000116.1 Protein Homology CDS 43015 43308 . + 0 ID=cds-WP_000081070.1;Parent=gene-AB11_RS10440;Dbxref=GenBank:WP_000081070.1;Name=WP_000081070.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=AB11_RS10440;product=ferredoxin family protein;protein_id=WP_000081070.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 43365 45011 . + . ID=gene-AB11_RS10445;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AB11_RS10445;old_locus_tag=AB11_1793 NZ_JHDH01000116.1 Protein Homology CDS 43365 45011 . + 0 ID=cds-WP_000869246.1;Parent=gene-AB11_RS10445;Dbxref=GenBank:WP_000869246.1;Name=WP_000869246.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AB11_RS10445;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000869246.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 45068 47446 . - . ID=gene-AB11_RS10450;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AB11_RS10450;old_locus_tag=AB11_1794 NZ_JHDH01000116.1 Protein Homology CDS 45068 47446 . - 0 ID=cds-WP_000069375.1;Parent=gene-AB11_RS10450;Dbxref=GenBank:WP_000069375.1;Name=WP_000069375.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AB11_RS10450;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 47779 48612 . + . ID=gene-AB11_RS10455;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AB11_RS10455;old_locus_tag=AB11_1796 NZ_JHDH01000116.1 Protein Homology CDS 47779 48612 . + 0 ID=cds-WP_000368046.1;Parent=gene-AB11_RS10455;Dbxref=GenBank:WP_000368046.1;Name=WP_000368046.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AB11_RS10455;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 48769 49815 . + . ID=gene-AB11_RS10460;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AB11_RS10460;old_locus_tag=AB11_1797 NZ_JHDH01000116.1 Protein Homology CDS 48769 49815 . + 0 ID=cds-WP_001082229.1;Parent=gene-AB11_RS10460;Dbxref=GenBank:WP_001082229.1;Name=WP_001082229.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416219.1;locus_tag=AB11_RS10460;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082229.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 49947 50138 . + . ID=gene-AB11_RS10465;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AB11_RS10465;old_locus_tag=AB11_1798 NZ_JHDH01000116.1 Protein Homology CDS 49947 50138 . + 0 ID=cds-WP_001270809.1;Parent=gene-AB11_RS10465;Dbxref=GenBank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AB11_RS10465;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 50142 51578 . - . ID=gene-AB11_RS10470;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AB11_RS10470;old_locus_tag=AB11_1799 NZ_JHDH01000116.1 Protein Homology CDS 50142 51578 . - 0 ID=cds-WP_000175606.1;Parent=gene-AB11_RS10470;Dbxref=GenBank:WP_000175606.1;Name=WP_000175606.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310440.1;locus_tag=AB11_RS10470;product=protein adenylyltransferase SelO;protein_id=WP_000175606.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 51641 52354 . - . ID=gene-AB11_RS10475;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AB11_RS10475;old_locus_tag=AB11_1800 NZ_JHDH01000116.1 Protein Homology CDS 51641 52354 . - 0 ID=cds-WP_001301292.1;Parent=gene-AB11_RS10475;Dbxref=GenBank:WP_001301292.1;Name=WP_001301292.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AB11_RS10475;product=anti-FlhDC factor;protein_id=WP_001301292.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 52601 53065 . - . ID=gene-AB11_RS10480;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AB11_RS10480;old_locus_tag=AB11_1801 NZ_JHDH01000116.1 Protein Homology CDS 52601 53065 . - 0 ID=cds-WP_001209795.1;Parent=gene-AB11_RS10480;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AB11_RS10480;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 53143 53892 . - . ID=gene-AB11_RS10485;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AB11_RS10485;old_locus_tag=AB11_1802 NZ_JHDH01000116.1 Protein Homology CDS 53143 53892 . - 0 ID=cds-WP_000029466.1;Parent=gene-AB11_RS10485;Dbxref=GenBank:WP_000029466.1;Name=WP_000029466.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AB11_RS10485;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 53892 54443 . - . ID=gene-AB11_RS10490;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AB11_RS10490;old_locus_tag=AB11_1803 NZ_JHDH01000116.1 Protein Homology CDS 53892 54443 . - 0 ID=cds-WP_032223373.1;Parent=gene-AB11_RS10490;Dbxref=GenBank:WP_032223373.1;Name=WP_032223373.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416225.1;locus_tag=AB11_RS10490;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_032223373.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 54506 55486 . - . ID=gene-AB11_RS10495;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AB11_RS10495;old_locus_tag=AB11_1804 NZ_JHDH01000116.1 Protein Homology CDS 54506 55486 . - 0 ID=cds-WP_000956528.1;Parent=gene-AB11_RS10495;Dbxref=GenBank:WP_000956528.1;Name=WP_000956528.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AB11_RS10495;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956528.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 55587 55886 . - . ID=gene-AB11_RS10500;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AB11_RS10500;old_locus_tag=AB11_1805 NZ_JHDH01000116.1 Protein Homology CDS 55587 55886 . - 0 ID=cds-WP_001229265.1;Parent=gene-AB11_RS10500;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AB11_RS10500;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 55891 58278 . - . ID=gene-AB11_RS10505;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AB11_RS10505;old_locus_tag=AB11_1806 NZ_JHDH01000116.1 Protein Homology CDS 55891 58278 . - 0 ID=cds-WP_000672380.1;Parent=gene-AB11_RS10505;Dbxref=GenBank:WP_000672380.1;Name=WP_000672380.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AB11_RS10505;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672380.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 58293 59276 . - . ID=gene-AB11_RS10510;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AB11_RS10510;old_locus_tag=AB11_1807 NZ_JHDH01000116.1 Protein Homology CDS 58293 59276 . - 0 ID=cds-WP_000018596.1;Parent=gene-AB11_RS10510;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AB11_RS10510;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JHDH01000116.1 cmsearch sequence_feature 59486 59610 . - . ID=id-NZ_JHDH01000116.1:59486..59610;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000116.1 RefSeq gene 59560 59604 . - . ID=gene-AB11_RS10515;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AB11_RS10515 NZ_JHDH01000116.1 Protein Homology CDS 59560 59604 . - 0 ID=cds-WP_001386830.1;Parent=gene-AB11_RS10515;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AB11_RS10515;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 59727 60083 . - . ID=gene-AB11_RS10520;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AB11_RS10520;old_locus_tag=AB11_1808 NZ_JHDH01000116.1 Protein Homology CDS 59727 60083 . - 0 ID=cds-WP_000124850.1;Parent=gene-AB11_RS10520;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AB11_RS10520;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 60136 60333 . - . ID=gene-AB11_RS10525;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AB11_RS10525;old_locus_tag=AB11_1809 NZ_JHDH01000116.1 Protein Homology CDS 60136 60333 . - 0 ID=cds-WP_001124225.1;Parent=gene-AB11_RS10525;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AB11_RS10525;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 60430 60972 . - . ID=gene-AB11_RS10530;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AB11_RS10530 NZ_JHDH01000116.1 Protein Homology CDS 60430 60972 . - 0 ID=cds-WP_001700733.1;Parent=gene-AB11_RS10530;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AB11_RS10530;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 60976 62904 . - . ID=gene-AB11_RS10535;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AB11_RS10535;old_locus_tag=AB11_1811 NZ_JHDH01000116.1 Protein Homology CDS 60976 62904 . - 0 ID=cds-WP_001144202.1;Parent=gene-AB11_RS10535;Dbxref=GenBank:WP_001144202.1;Name=WP_001144202.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AB11_RS10535;product=threonine--tRNA ligase;protein_id=WP_001144202.1;transl_table=11 NZ_JHDH01000116.1 RefSeq pseudogene 63428 65327 . + . ID=gene-AB11_RS10540;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AB11_RS10540;old_locus_tag=AB11_1813;pseudo=true NZ_JHDH01000116.1 Protein Homology CDS 63428 65327 . + 0 ID=cds-AB11_RS10540;Parent=gene-AB11_RS10540;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AB11_RS10540;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 65499 65606 . + . ID=gene-AB11_RS10545;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AB11_RS10545;old_locus_tag=AB11_1814 NZ_JHDH01000116.1 Protein Homology CDS 65499 65606 . + 0 ID=cds-WP_001142445.1;Parent=gene-AB11_RS10545;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AB11_RS10545;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 65659 66417 . - . ID=gene-AB11_RS10550;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AB11_RS10550;old_locus_tag=AB11_1815 NZ_JHDH01000116.1 Protein Homology CDS 65659 66417 . - 0 ID=cds-WP_032223376.1;Parent=gene-AB11_RS10550;Dbxref=GenBank:WP_032223376.1;Name=WP_032223376.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416236.1;locus_tag=AB11_RS10550;product=DUF481 domain-containing protein;protein_id=WP_032223376.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 66704 67633 . + . ID=gene-AB11_RS10555;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AB11_RS10555;old_locus_tag=AB11_1816 NZ_JHDH01000116.1 Protein Homology CDS 66704 67633 . + 0 ID=cds-WP_000251727.1;Parent=gene-AB11_RS10555;Dbxref=GenBank:WP_000251727.1;Name=WP_000251727.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AB11_RS10555;product=6-phosphofructokinase II;protein_id=WP_000251727.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 67734 68024 . + . ID=gene-AB11_RS10560;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB11_RS10560;old_locus_tag=AB11_1817 NZ_JHDH01000116.1 Protein Homology CDS 67734 68024 . + 0 ID=cds-WP_000146159.1;Parent=gene-AB11_RS10560;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AB11_RS10560;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 68130 68990 . + . ID=gene-AB11_RS10565;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AB11_RS10565;old_locus_tag=AB11_1818 NZ_JHDH01000116.1 Protein Homology CDS 68130 68990 . + 0 ID=cds-WP_000267650.1;Parent=gene-AB11_RS10565;Dbxref=GenBank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AB11_RS10565;product=fructosamine kinase family protein;protein_id=WP_000267650.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 69031 69567 . - . ID=gene-AB11_RS10570;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AB11_RS10570;old_locus_tag=AB11_1819 NZ_JHDH01000116.1 Protein Homology CDS 69031 69567 . - 0 ID=cds-WP_000222163.1;Parent=gene-AB11_RS10570;Dbxref=GenBank:WP_000222163.1;Name=WP_000222163.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AB11_RS10570;product=YniB family protein;protein_id=WP_000222163.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 69714 70382 . + . ID=gene-AB11_RS10575;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AB11_RS10575;old_locus_tag=AB11_1820 NZ_JHDH01000116.1 Protein Homology CDS 69714 70382 . + 0 ID=cds-WP_000106833.1;Parent=gene-AB11_RS10575;Dbxref=GenBank:WP_000106833.1;Name=WP_000106833.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AB11_RS10575;product=hexitol phosphatase HxpB;protein_id=WP_000106833.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 70545 71135 . + . ID=gene-AB11_RS10580;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AB11_RS10580;old_locus_tag=AB11_1821 NZ_JHDH01000116.1 Protein Homology CDS 70545 71135 . + 0 ID=cds-WP_001297653.1;Parent=gene-AB11_RS10580;Dbxref=GenBank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AB11_RS10580;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 71268 72659 . + . ID=gene-AB11_RS10585;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AB11_RS10585;old_locus_tag=AB11_1822 NZ_JHDH01000116.1 Protein Homology CDS 71268 72659 . + 0 ID=cds-WP_001010696.1;Parent=gene-AB11_RS10585;Dbxref=GenBank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AB11_RS10585;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 72663 73466 . - . ID=gene-AB11_RS10590;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AB11_RS10590;old_locus_tag=AB11_1823 NZ_JHDH01000116.1 Protein Homology CDS 72663 73466 . - 0 ID=cds-WP_001310874.1;Parent=gene-AB11_RS10590;Dbxref=GenBank:WP_001310874.1;Name=WP_001310874.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AB11_RS10590;product=protein YdjO;protein_id=WP_001310874.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 73755 74018 . - . ID=gene-AB11_RS10595;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AB11_RS10595;old_locus_tag=AB11_1824 NZ_JHDH01000116.1 Protein Homology CDS 73755 74018 . - 0 ID=cds-WP_001241561.1;Parent=gene-AB11_RS10595;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AB11_RS10595;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 74201 76462 . + . ID=gene-AB11_RS10600;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AB11_RS10600;old_locus_tag=AB11_1825 NZ_JHDH01000116.1 Protein Homology CDS 74201 76462 . + 0 ID=cds-WP_000077873.1;Parent=gene-AB11_RS10600;Dbxref=GenBank:WP_000077873.1;Name=WP_000077873.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AB11_RS10600;product=catalase HPII;protein_id=WP_000077873.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 76720 77469 . - . ID=gene-AB11_RS10605;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AB11_RS10605;old_locus_tag=AB11_1826 NZ_JHDH01000116.1 Protein Homology CDS 76720 77469 . - 0 ID=cds-WP_000440471.1;Parent=gene-AB11_RS10605;Dbxref=GenBank:WP_000440471.1;Name=WP_000440471.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AB11_RS10605;product=chitin disaccharide deacetylase;protein_id=WP_000440471.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 77482 78834 . - . ID=gene-AB11_RS10610;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AB11_RS10610;old_locus_tag=AB11_1827 NZ_JHDH01000116.1 Protein Homology CDS 77482 78834 . - 0 ID=cds-WP_000078757.1;Parent=gene-AB11_RS10610;Dbxref=GenBank:WP_000078757.1;Name=WP_000078757.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416248.1;locus_tag=AB11_RS10610;product=6-phospho-beta-glucosidase;protein_id=WP_000078757.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 78939 79781 . - . ID=gene-AB11_RS10615;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AB11_RS10615;old_locus_tag=AB11_1828 NZ_JHDH01000116.1 Protein Homology CDS 78939 79781 . - 0 ID=cds-WP_000983647.1;Parent=gene-AB11_RS10615;Dbxref=GenBank:WP_000983647.1;Name=WP_000983647.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AB11_RS10615;product=transcriptional regulator ChbR;protein_id=WP_000983647.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 79789 80139 . - . ID=gene-AB11_RS10620;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AB11_RS10620;old_locus_tag=AB11_1829 NZ_JHDH01000116.1 Protein Homology CDS 79789 80139 . - 0 ID=cds-WP_000968919.1;Parent=gene-AB11_RS10620;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AB11_RS10620;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 80190 81548 . - . ID=gene-AB11_RS10625;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AB11_RS10625;old_locus_tag=AB11_1830 NZ_JHDH01000116.1 Protein Homology CDS 80190 81548 . - 0 ID=cds-WP_000073041.1;Parent=gene-AB11_RS10625;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AB11_RS10625;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 81633 81953 . - . ID=gene-AB11_RS10630;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AB11_RS10630;old_locus_tag=AB11_1831 NZ_JHDH01000116.1 Protein Homology CDS 81633 81953 . - 0 ID=cds-WP_000412169.1;Parent=gene-AB11_RS10630;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AB11_RS10630;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 82252 82590 . - . ID=gene-AB11_RS10635;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AB11_RS10635;old_locus_tag=AB11_1832 NZ_JHDH01000116.1 Protein Homology CDS 82252 82590 . - 0 ID=cds-WP_001039044.1;Parent=gene-AB11_RS10635;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AB11_RS10635;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 82792 83619 . + . ID=gene-AB11_RS10640;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AB11_RS10640;old_locus_tag=AB11_1833 NZ_JHDH01000116.1 Protein Homology CDS 82792 83619 . + 0 ID=cds-WP_000175026.1;Parent=gene-AB11_RS10640;Dbxref=GenBank:WP_000175026.1;Name=WP_000175026.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AB11_RS10640;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 83849 84736 . + . ID=gene-AB11_RS10645;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AB11_RS10645;old_locus_tag=AB11_1834 NZ_JHDH01000116.1 Protein Homology CDS 83849 84736 . + 0 ID=cds-WP_000252397.1;Parent=gene-AB11_RS10645;Dbxref=GenBank:WP_000252397.1;Name=WP_000252397.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AB11_RS10645;product=excinuclease Cho;protein_id=WP_000252397.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 84696 85271 . - . ID=gene-AB11_RS10650;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AB11_RS10650;old_locus_tag=AB11_1835 NZ_JHDH01000116.1 Protein Homology CDS 84696 85271 . - 0 ID=cds-WP_001300480.1;Parent=gene-AB11_RS10650;Dbxref=GenBank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AB11_RS10650;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 85474 85959 . - . ID=gene-AB11_RS10655;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AB11_RS10655;old_locus_tag=AB11_1836 NZ_JHDH01000116.1 Protein Homology CDS 85474 85959 . - 0 ID=cds-WP_001228984.1;Parent=gene-AB11_RS10655;Dbxref=GenBank:WP_001228984.1;Name=WP_001228984.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AB11_RS10655;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228984.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 86288 87256 . - . ID=gene-AB11_RS10660;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AB11_RS10660;old_locus_tag=AB11_1837 NZ_JHDH01000116.1 Protein Homology CDS 86288 87256 . - 0 ID=cds-WP_000368506.1;Parent=gene-AB11_RS10660;Dbxref=GenBank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AB11_RS10660;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 87249 88592 . - . ID=gene-AB11_RS10665;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AB11_RS10665;old_locus_tag=AB11_1838 NZ_JHDH01000116.1 Protein Homology CDS 87249 88592 . - 0 ID=cds-WP_000995016.1;Parent=gene-AB11_RS10665;Dbxref=GenBank:WP_000995016.1;Name=WP_000995016.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AB11_RS10665;product=N-succinylarginine dihydrolase;protein_id=WP_000995016.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 88589 90067 . - . ID=gene-AB11_RS10670;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AB11_RS10670;old_locus_tag=AB11_1839 NZ_JHDH01000116.1 Protein Homology CDS 88589 90067 . - 0 ID=cds-WP_000177254.1;Parent=gene-AB11_RS10670;Dbxref=GenBank:WP_000177254.1;Name=WP_000177254.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AB11_RS10670;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177254.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 90064 91098 . - . ID=gene-AB11_RS10675;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AB11_RS10675;old_locus_tag=AB11_1840 NZ_JHDH01000116.1 Protein Homology CDS 90064 91098 . - 0 ID=cds-WP_000989419.1;Parent=gene-AB11_RS10675;Dbxref=GenBank:WP_000989419.1;Name=WP_000989419.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AB11_RS10675;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 91095 92315 . - . ID=gene-AB11_RS10680;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AB11_RS10680;old_locus_tag=AB11_1841 NZ_JHDH01000116.1 Protein Homology CDS 91095 92315 . - 0 ID=cds-WP_000081986.1;Parent=gene-AB11_RS10680;Dbxref=GenBank:WP_000081986.1;Name=WP_000081986.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AB11_RS10680;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081986.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 92761 93567 . + . ID=gene-AB11_RS10685;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AB11_RS10685;old_locus_tag=AB11_1843 NZ_JHDH01000116.1 Protein Homology CDS 92761 93567 . + 0 ID=cds-WP_000673918.1;Parent=gene-AB11_RS10685;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AB11_RS10685;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 93734 94444 . + . ID=gene-AB11_RS10690;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AB11_RS10690;old_locus_tag=AB11_1844 NZ_JHDH01000116.1 Protein Homology CDS 93734 94444 . + 0 ID=cds-WP_001300395.1;Parent=gene-AB11_RS10690;Dbxref=GenBank:WP_001300395.1;Name=WP_001300395.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AB11_RS10690;product=TVP38/TMEM64 family protein;protein_id=WP_001300395.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 94449 95126 . + . ID=gene-AB11_RS10695;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AB11_RS10695;old_locus_tag=AB11_1845 NZ_JHDH01000116.1 Protein Homology CDS 94449 95126 . + 0 ID=cds-WP_000939212.1;Parent=gene-AB11_RS10695;Dbxref=GenBank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AB11_RS10695;product=lipoprotein YdjY;protein_id=WP_000939212.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 95141 95848 . + . ID=gene-AB11_RS10700;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AB11_RS10700;old_locus_tag=AB11_1846 NZ_JHDH01000116.1 Protein Homology CDS 95141 95848 . + 0 ID=cds-WP_000980098.1;Parent=gene-AB11_RS10700;Dbxref=GenBank:WP_000980098.1;Name=WP_000980098.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416266.1;locus_tag=AB11_RS10700;product=TVP38/TMEM64 family protein;protein_id=WP_000980098.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 95848 96396 . + . ID=gene-AB11_RS10705;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AB11_RS10705;old_locus_tag=AB11_1847 NZ_JHDH01000116.1 Protein Homology CDS 95848 96396 . + 0 ID=cds-WP_000524097.1;Parent=gene-AB11_RS10705;Dbxref=GenBank:WP_000524097.1;Name=WP_000524097.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AB11_RS10705;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524097.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 96406 97572 . + . ID=gene-AB11_RS10710;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AB11_RS10710;old_locus_tag=AB11_1848 NZ_JHDH01000116.1 Protein Homology CDS 96406 97572 . + 0 ID=cds-WP_001215339.1;Parent=gene-AB11_RS10710;Dbxref=GenBank:WP_001215339.1;Name=WP_001215339.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AB11_RS10710;product=ABC transporter substrate-binding protein;protein_id=WP_001215339.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 97545 99080 . + . ID=gene-AB11_RS10715;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AB11_RS10715;old_locus_tag=AB11_1849 NZ_JHDH01000116.1 Protein Homology CDS 97545 99080 . + 0 ID=cds-WP_000224958.1;Parent=gene-AB11_RS10715;Dbxref=GenBank:WP_000224958.1;Name=WP_000224958.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ynjC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=AB11_RS10715;product=ABC transporter permease subunit;protein_id=WP_000224958.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 99080 99733 . + . ID=gene-AB11_RS10720;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AB11_RS10720;old_locus_tag=AB11_1850 NZ_JHDH01000116.1 Protein Homology CDS 99080 99733 . + 0 ID=cds-WP_001300558.1;Parent=gene-AB11_RS10720;Dbxref=GenBank:WP_001300558.1;Name=WP_001300558.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416270.1;locus_tag=AB11_RS10720;product=ATP-binding cassette domain-containing protein;protein_id=WP_001300558.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 99800 101107 . + . ID=gene-AB11_RS10725;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AB11_RS10725;old_locus_tag=AB11_1851 NZ_JHDH01000116.1 Protein Homology CDS 99800 101107 . + 0 ID=cds-WP_021570813.1;Parent=gene-AB11_RS10725;Dbxref=GenBank:WP_021570813.1;Name=WP_021570813.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AB11_RS10725;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_021570813.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 101116 101736 . - . ID=gene-AB11_RS10730;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AB11_RS10730;old_locus_tag=AB11_1852 NZ_JHDH01000116.1 Protein Homology CDS 101116 101736 . - 0 ID=cds-WP_001295484.1;Parent=gene-AB11_RS10730;Dbxref=GenBank:WP_001295484.1;Name=WP_001295484.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AB11_RS10730;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 101823 102230 . + . ID=gene-AB11_RS10735;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AB11_RS10735;old_locus_tag=AB11_1853 NZ_JHDH01000116.1 Protein Homology CDS 101823 102230 . + 0 ID=cds-WP_000781888.1;Parent=gene-AB11_RS10735;Dbxref=GenBank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AB11_RS10735;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 102196 102468 . - . ID=gene-AB11_RS10740;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AB11_RS10740;old_locus_tag=AB11_1854 NZ_JHDH01000116.1 Protein Homology CDS 102196 102468 . - 0 ID=cds-WP_000085240.1;Parent=gene-AB11_RS10740;Dbxref=GenBank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AB11_RS10740;product=YnjH family protein;protein_id=WP_000085240.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 102704 104047 . + . ID=gene-AB11_RS10745;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AB11_RS10745;old_locus_tag=AB11_1856 NZ_JHDH01000116.1 Protein Homology CDS 102704 104047 . + 0 ID=cds-WP_000373021.1;Parent=gene-AB11_RS10745;Dbxref=GenBank:WP_000373021.1;Name=WP_000373021.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416275.1;locus_tag=AB11_RS10745;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373021.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 104164 105204 . - . ID=gene-AB11_RS10750;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=protein_coding;locus_tag=AB11_RS10750;old_locus_tag=AB11_1857 NZ_JHDH01000116.1 Protein Homology CDS 104164 105204 . - 0 ID=cds-WP_000756910.1;Parent=gene-AB11_RS10750;Dbxref=GenBank:WP_000756910.1;Name=WP_000756910.1;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AB11_RS10750;product=DUF1266 domain-containing protein;protein_id=WP_000756910.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 105332 107293 . - . ID=gene-AB11_RS10755;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AB11_RS10755;old_locus_tag=AB11_1858 NZ_JHDH01000116.1 Protein Homology CDS 105332 107293 . - 0 ID=cds-WP_001235800.1;Parent=gene-AB11_RS10755;Dbxref=GenBank:WP_001235800.1;Name=WP_001235800.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AB11_RS10755;product=DNA topoisomerase III;protein_id=WP_001235800.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 107298 108341 . - . ID=gene-AB11_RS10760;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AB11_RS10760;old_locus_tag=AB11_1859 NZ_JHDH01000116.1 Protein Homology CDS 107298 108341 . - 0 ID=cds-WP_001295485.1;Parent=gene-AB11_RS10760;Dbxref=GenBank:WP_001295485.1;Name=WP_001295485.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416278.1;locus_tag=AB11_RS10760;product=selenide%2C water dikinase SelD;protein_id=WP_001295485.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 108458 109009 . - . ID=gene-AB11_RS10765;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AB11_RS10765;old_locus_tag=AB11_1860 NZ_JHDH01000116.1 Protein Homology CDS 108458 109009 . - 0 ID=cds-WP_000339283.1;Parent=gene-AB11_RS10765;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AB11_RS10765;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 109170 111026 . + . ID=gene-AB11_RS10770;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AB11_RS10770;old_locus_tag=AB11_1861 NZ_JHDH01000116.1 Protein Homology CDS 109170 111026 . + 0 ID=cds-WP_001459801.1;Parent=gene-AB11_RS10770;Dbxref=GenBank:WP_001459801.1;Name=WP_001459801.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AB11_RS10770;product=signal peptide peptidase SppA;protein_id=WP_001459801.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 111193 112209 . + . ID=gene-AB11_RS10775;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AB11_RS10775;old_locus_tag=AB11_1862 NZ_JHDH01000116.1 Protein Homology CDS 111193 112209 . + 0 ID=cds-WP_001170157.1;Parent=gene-AB11_RS10775;Dbxref=GenBank:WP_001170157.1;Name=WP_001170157.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AB11_RS10775;product=asparaginase;protein_id=WP_001170157.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 112220 112861 . + . ID=gene-AB11_RS10780;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AB11_RS10780;old_locus_tag=AB11_1863 NZ_JHDH01000116.1 Protein Homology CDS 112220 112861 . + 0 ID=cds-WP_001135066.1;Parent=gene-AB11_RS10780;Dbxref=GenBank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AB11_RS10780;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 112954 114312 . - . ID=gene-AB11_RS10785;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AB11_RS10785;old_locus_tag=AB11_1864 NZ_JHDH01000116.1 Protein Homology CDS 112954 114312 . - 0 ID=cds-WP_001300835.1;Parent=gene-AB11_RS10785;Dbxref=GenBank:WP_001300835.1;Name=WP_001300835.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AB11_RS10785;product=MFS transporter;protein_id=WP_001300835.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 114430 115188 . - . ID=gene-AB11_RS10790;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AB11_RS10790;old_locus_tag=AB11_1865 NZ_JHDH01000116.1 Protein Homology CDS 114430 115188 . - 0 ID=cds-WP_000719088.1;Parent=gene-AB11_RS10790;Dbxref=GenBank:WP_000719088.1;Name=WP_000719088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=AB11_RS10790;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719088.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 115325 116305 . - . ID=gene-AB11_RS10795;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AB11_RS10795;old_locus_tag=AB11_1866 NZ_JHDH01000116.1 Protein Homology CDS 115325 116305 . - 0 ID=cds-WP_000723723.1;Parent=gene-AB11_RS10795;Dbxref=GenBank:WP_000723723.1;Name=WP_000723723.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AB11_RS10795;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723723.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 116315 117262 . - . ID=gene-AB11_RS10800;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AB11_RS10800;old_locus_tag=AB11_1867 NZ_JHDH01000116.1 Protein Homology CDS 116315 117262 . - 0 ID=cds-WP_032223379.1;Parent=gene-AB11_RS10800;Dbxref=GenBank:WP_032223379.1;Name=WP_032223379.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AB11_RS10800;product=sugar kinase;protein_id=WP_032223379.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 117267 118103 . - . ID=gene-AB11_RS10805;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AB11_RS10805;old_locus_tag=AB11_1868 NZ_JHDH01000116.1 Protein Homology CDS 117267 118103 . - 0 ID=cds-WP_001556648.1;Parent=gene-AB11_RS10805;Dbxref=GenBank:WP_001556648.1;Name=WP_001556648.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AB11_RS10805;product=ketose-bisphosphate aldolase;protein_id=WP_001556648.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 118124 119167 . - . ID=gene-AB11_RS10810;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;locus_tag=AB11_RS10810;old_locus_tag=AB11_1869 NZ_JHDH01000116.1 Protein Homology CDS 118124 119167 . - 0 ID=cds-WP_000798116.1;Parent=gene-AB11_RS10810;Dbxref=GenBank:WP_000798116.1;Name=WP_000798116.1;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AB11_RS10810;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798116.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 119184 120563 . - . ID=gene-AB11_RS10815;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AB11_RS10815;old_locus_tag=AB11_1870 NZ_JHDH01000116.1 Protein Homology CDS 119184 120563 . - 0 ID=cds-WP_032223381.1;Parent=gene-AB11_RS10815;Dbxref=GenBank:WP_032223381.1;Name=WP_032223381.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AB11_RS10815;product=MFS transporter;protein_id=WP_032223381.1;transl_table=11 NZ_JHDH01000116.1 RefSeq pseudogene 120590 121666 . - . ID=gene-AB11_RS10820;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=pseudogene;locus_tag=AB11_RS10820;pseudo=true NZ_JHDH01000116.1 Protein Homology CDS 120590 121666 . - 0 ID=cds-AB11_RS10820;Parent=gene-AB11_RS10820;Note=internal stop;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AB11_RS10820;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 122036 122308 . - . ID=gene-AB11_RS10825;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AB11_RS10825;old_locus_tag=AB11_1873 NZ_JHDH01000116.1 Protein Homology CDS 122036 122308 . - 0 ID=cds-WP_001300415.1;Parent=gene-AB11_RS10825;Dbxref=GenBank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416291.4;locus_tag=AB11_RS10825;product=YeaC family protein;protein_id=WP_001300415.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 122350 122763 . - . ID=gene-AB11_RS10830;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AB11_RS10830;old_locus_tag=AB11_1874 NZ_JHDH01000116.1 Protein Homology CDS 122350 122763 . - 0 ID=cds-WP_001284618.1;Parent=gene-AB11_RS10830;Dbxref=GenBank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AB11_RS10830;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 123105 124100 . + . ID=gene-AB11_RS10835;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AB11_RS10835;old_locus_tag=AB11_1875 NZ_JHDH01000116.1 Protein Homology CDS 123105 124100 . + 0 ID=cds-WP_000153502.1;Parent=gene-AB11_RS10835;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AB11_RS10835;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 124184 125068 . + . ID=gene-AB11_RS10840;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AB11_RS10840;old_locus_tag=AB11_1876 NZ_JHDH01000116.1 Protein Homology CDS 124184 125068 . + 0 ID=cds-WP_001295488.1;Parent=gene-AB11_RS10840;Dbxref=GenBank:WP_001295488.1;Name=WP_001295488.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AB11_RS10840;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001295488.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 125116 125970 . - . ID=gene-AB11_RS10845;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AB11_RS10845;old_locus_tag=AB11_1877 NZ_JHDH01000116.1 Protein Homology CDS 125116 125970 . - 0 ID=cds-WP_001186374.1;Parent=gene-AB11_RS10845;Dbxref=GenBank:WP_001186374.1;Name=WP_001186374.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AB11_RS10845;product=methylglyoxal reductase YeaE;protein_id=WP_001186374.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 126060 126806 . - . ID=gene-AB11_RS10850;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AB11_RS10850;old_locus_tag=AB11_1878 NZ_JHDH01000116.1 Protein Homology CDS 126060 126806 . - 0 ID=cds-WP_000163771.1;Parent=gene-AB11_RS10850;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AB11_RS10850;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 127242 129176 . + . ID=gene-AB11_RS10855;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AB11_RS10855;old_locus_tag=AB11_1879 NZ_JHDH01000116.1 Protein Homology CDS 127242 129176 . + 0 ID=cds-WP_001019882.1;Parent=gene-AB11_RS10855;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AB11_RS10855;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 129289 130572 . + . ID=gene-AB11_RS10860;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AB11_RS10860;old_locus_tag=AB11_1880 NZ_JHDH01000116.1 Protein Homology CDS 129289 130572 . + 0 ID=cds-WP_000219687.1;Parent=gene-AB11_RS10860;Dbxref=GenBank:WP_000219687.1;Name=WP_000219687.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416298.1;locus_tag=AB11_RS10860;product=YeaH/YhbH family protein;protein_id=WP_000219687.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 130719 132194 . + . ID=gene-AB11_RS10865;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AB11_RS10865;old_locus_tag=AB11_1881 NZ_JHDH01000116.1 Protein Homology CDS 130719 132194 . + 0 ID=cds-WP_000616433.1;Parent=gene-AB11_RS10865;Dbxref=GenBank:WP_000616433.1;Name=WP_000616433.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AB11_RS10865;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616433.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 132375 133865 . + . ID=gene-AB11_RS10870;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AB11_RS10870;old_locus_tag=AB11_1882 NZ_JHDH01000116.1 Protein Homology CDS 132375 133865 . + 0 ID=cds-WP_000766132.1;Parent=gene-AB11_RS10870;Dbxref=GenBank:WP_000766132.1;Name=WP_000766132.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AB11_RS10870;product=diguanylate cyclase DgcJ;protein_id=WP_000766132.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 133908 134411 . + . ID=gene-AB11_RS10875;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AB11_RS10875;old_locus_tag=AB11_1883 NZ_JHDH01000116.1 Protein Homology CDS 133908 134411 . + 0 ID=cds-WP_000138043.1;Parent=gene-AB11_RS10875;Dbxref=GenBank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AB11_RS10875;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138043.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 134412 134516 . - . ID=gene-AB11_RS10880;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AB11_RS10880;old_locus_tag=AB11_1884 NZ_JHDH01000116.1 Protein Homology CDS 134412 134516 . - 0 ID=cds-WP_000999630.1;Parent=gene-AB11_RS10880;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AB11_RS10880;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 134686 135132 . + . ID=gene-AB11_RS10885;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AB11_RS10885;old_locus_tag=AB11_1885 NZ_JHDH01000116.1 Protein Homology CDS 134686 135132 . + 0 ID=cds-WP_000460707.1;Parent=gene-AB11_RS10885;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AB11_RS10885;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 135089 135910 . - . ID=gene-AB11_RS10890;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AB11_RS10890;old_locus_tag=AB11_1886 NZ_JHDH01000116.1 Protein Homology CDS 135089 135910 . - 0 ID=cds-WP_000972248.1;Parent=gene-AB11_RS10890;Dbxref=GenBank:WP_000972248.1;Name=WP_000972248.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AB11_RS10890;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972248.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 136007 137188 . + . ID=gene-AB11_RS10895;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AB11_RS10895;old_locus_tag=AB11_1887 NZ_JHDH01000116.1 Protein Homology CDS 136007 137188 . + 0 ID=cds-WP_000128491.1;Parent=gene-AB11_RS10895;Dbxref=GenBank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AB11_RS10895;product=2-nitroimidazole transporter;protein_id=WP_000128491.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 137243 137590 . + . ID=gene-AB11_RS10900;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AB11_RS10900;old_locus_tag=AB11_1888 NZ_JHDH01000116.1 Protein Homology CDS 137243 137590 . + 0 ID=cds-WP_001326526.1;Parent=gene-AB11_RS10900;Dbxref=GenBank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AB11_RS10900;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 137612 137866 . - . ID=gene-AB11_RS10905;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AB11_RS10905;old_locus_tag=AB11_1889 NZ_JHDH01000116.1 Protein Homology CDS 137612 137866 . - 0 ID=cds-WP_000691930.1;Parent=gene-AB11_RS10905;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AB11_RS10905;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 138049 139074 . + . ID=gene-AB11_RS10910;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AB11_RS10910;old_locus_tag=AB11_1890 NZ_JHDH01000116.1 Protein Homology CDS 138049 139074 . + 0 ID=cds-WP_001310896.1;Parent=gene-AB11_RS10910;Dbxref=GenBank:WP_001310896.1;Name=WP_001310896.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AB11_RS10910;product=diguanylate cyclase DgcP;protein_id=WP_001310896.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 139107 139205 . + . ID=gene-AB11_RS10915;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AB11_RS10915 NZ_JHDH01000116.1 Protein Homology CDS 139107 139205 . + 0 ID=cds-WP_001219350.1;Parent=gene-AB11_RS10915;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AB11_RS10915;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 139208 139282 . + . ID=gene-AB11_RS10920;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AB11_RS10920 NZ_JHDH01000116.1 Protein Homology CDS 139208 139282 . + 0 ID=cds-WP_001386836.1;Parent=gene-AB11_RS10920;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AB11_RS10920;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 139341 139589 . - . ID=gene-AB11_RS10925;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AB11_RS10925;old_locus_tag=AB11_1892 NZ_JHDH01000116.1 Protein Homology CDS 139341 139589 . - 0 ID=cds-WP_000512153.1;Parent=gene-AB11_RS10925;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AB11_RS10925;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 139737 139919 . - . ID=gene-AB11_RS10930;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AB11_RS10930;old_locus_tag=AB11_1893 NZ_JHDH01000116.1 Protein Homology CDS 139737 139919 . - 0 ID=cds-WP_000513737.1;Parent=gene-AB11_RS10930;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AB11_RS10930;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 139923 140282 . - . ID=gene-AB11_RS10935;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AB11_RS10935;old_locus_tag=AB11_1894 NZ_JHDH01000116.1 Protein Homology CDS 139923 140282 . - 0 ID=cds-WP_000939317.1;Parent=gene-AB11_RS10935;Dbxref=GenBank:WP_000939317.1;Name=WP_000939317.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AB11_RS10935;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939317.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 140455 141093 . - . ID=gene-AB11_RS10940;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AB11_RS10940;old_locus_tag=AB11_1896 NZ_JHDH01000116.1 Protein Homology CDS 140455 141093 . - 0 ID=cds-WP_000457206.1;Parent=gene-AB11_RS10940;Dbxref=GenBank:WP_000457206.1;Name=WP_000457206.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AB11_RS10940;product=leucine efflux protein LeuE;protein_id=WP_000457206.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 141220 142143 . - . ID=gene-AB11_RS10945;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AB11_RS10945;old_locus_tag=AB11_1897 NZ_JHDH01000116.1 Protein Homology CDS 141220 142143 . - 0 ID=cds-WP_001300522.1;Parent=gene-AB11_RS10945;Dbxref=GenBank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AB11_RS10945;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 142246 143331 . + . ID=gene-AB11_RS10950;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AB11_RS10950;old_locus_tag=AB11_1898 NZ_JHDH01000116.1 Protein Homology CDS 142246 143331 . + 0 ID=cds-WP_021570819.1;Parent=gene-AB11_RS10950;Dbxref=GenBank:WP_021570819.1;Name=WP_021570819.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AB11_RS10950;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_021570819.1;transl_table=11 NZ_JHDH01000116.1 RefSeq pseudogene 143486 144967 . + . ID=gene-AB11_RS10955;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=AB11_RS10955;old_locus_tag=AB11_1899;partial=true;pseudo=true;start_range=.,143486 NZ_JHDH01000116.1 Protein Homology CDS 143486 144967 . + 0 ID=cds-AB11_RS10955;Parent=gene-AB11_RS10955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AB11_RS10955;partial=true;product=BCCT family transporter YeaV;pseudo=true;start_range=.,143486;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 144999 146123 . + . ID=gene-AB11_RS10960;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AB11_RS10960;old_locus_tag=AB11_1900 NZ_JHDH01000116.1 Protein Homology CDS 144999 146123 . + 0 ID=cds-WP_032223383.1;Parent=gene-AB11_RS10960;Dbxref=GenBank:WP_032223383.1;Name=WP_032223383.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AB11_RS10960;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_032223383.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 146179 147144 . + . ID=gene-AB11_RS10965;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AB11_RS10965;old_locus_tag=AB11_1901 NZ_JHDH01000116.1 Protein Homology CDS 146179 147144 . + 0 ID=cds-WP_001287026.1;Parent=gene-AB11_RS10965;Dbxref=GenBank:WP_001287026.1;Name=WP_001287026.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AB11_RS10965;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_001287026.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 147198 148313 . - . ID=gene-AB11_RS10970;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AB11_RS10970;old_locus_tag=AB11_1902 NZ_JHDH01000116.1 Protein Homology CDS 147198 148313 . - 0 ID=cds-WP_001307844.1;Parent=gene-AB11_RS10970;Dbxref=GenBank:WP_001307844.1;Name=WP_001307844.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=AB11_RS10970;product=ribonuclease D;protein_id=WP_001307844.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 148395 150080 . - . ID=gene-AB11_RS10975;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AB11_RS10975;old_locus_tag=AB11_1903 NZ_JHDH01000116.1 Protein Homology CDS 148395 150080 . - 0 ID=cds-WP_077699290.1;Parent=gene-AB11_RS10975;Dbxref=GenBank:WP_077699290.1;Name=WP_077699290.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AB11_RS10975;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_077699290.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 150285 150866 . - . ID=gene-AB11_RS10980;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AB11_RS10980;old_locus_tag=AB11_1904 NZ_JHDH01000116.1 Protein Homology CDS 150285 150866 . - 0 ID=cds-WP_000290576.1;Parent=gene-AB11_RS10980;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AB11_RS10980;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 150906 151601 . - . ID=gene-AB11_RS10985;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AB11_RS10985;old_locus_tag=AB11_1905 NZ_JHDH01000116.1 Protein Homology CDS 150906 151601 . - 0 ID=cds-WP_001220966.1;Parent=gene-AB11_RS10985;Dbxref=GenBank:WP_001220966.1;Name=WP_001220966.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AB11_RS10985;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 151659 153569 . - . ID=gene-AB11_RS10990;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AB11_RS10990;old_locus_tag=AB11_1906 NZ_JHDH01000116.1 Protein Homology CDS 151659 153569 . - 0 ID=cds-WP_000128847.1;Parent=gene-AB11_RS10990;Dbxref=GenBank:WP_000128847.1;Name=WP_000128847.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AB11_RS10990;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 153701 154045 . + . ID=gene-AB11_RS10995;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AB11_RS10995;old_locus_tag=AB11_1907 NZ_JHDH01000116.1 Protein Homology CDS 153701 154045 . + 0 ID=cds-WP_001295493.1;Parent=gene-AB11_RS10995;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AB11_RS10995;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 154467 154766 . + . ID=gene-AB11_RS11000;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=AB11_RS11000;old_locus_tag=AB11_1909 NZ_JHDH01000116.1 Protein Homology CDS 154467 154766 . + 0 ID=cds-WP_021570820.1;Parent=gene-AB11_RS11000;Dbxref=GenBank:WP_021570820.1;Name=WP_021570820.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AB11_RS11000;product=DUF1889 family protein;protein_id=WP_021570820.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 154886 155065 . - . ID=gene-AB11_RS11005;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AB11_RS11005;old_locus_tag=AB11_1910 NZ_JHDH01000116.1 Protein Homology CDS 154886 155065 . - 0 ID=cds-WP_000457334.1;Parent=gene-AB11_RS11005;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AB11_RS11005;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 155139 156500 . + . ID=gene-AB11_RS11010;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AB11_RS11010;old_locus_tag=AB11_1911 NZ_JHDH01000116.1 Protein Homology CDS 155139 156500 . + 0 ID=cds-WP_000855022.1;Parent=gene-AB11_RS11010;Dbxref=GenBank:WP_000855022.1;Name=WP_000855022.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416326.1;locus_tag=AB11_RS11010;product=aminodeoxychorismate synthase component 1;protein_id=WP_000855022.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 156504 157082 . + . ID=gene-AB11_RS11015;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AB11_RS11015;old_locus_tag=AB11_1912 NZ_JHDH01000116.1 Protein Homology CDS 156504 157082 . + 0 ID=cds-WP_000456715.1;Parent=gene-AB11_RS11015;Dbxref=GenBank:WP_000456715.1;Name=WP_000456715.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416327.1;locus_tag=AB11_RS11015;product=CoA pyrophosphatase;protein_id=WP_000456715.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 157266 158630 . + . ID=gene-AB11_RS11020;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AB11_RS11020;old_locus_tag=AB11_1913 NZ_JHDH01000116.1 Protein Homology CDS 157266 158630 . + 0 ID=cds-WP_000624298.1;Parent=gene-AB11_RS11020;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AB11_RS11020;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 158761 160359 . + . ID=gene-AB11_RS11025;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AB11_RS11025;old_locus_tag=AB11_1914 NZ_JHDH01000116.1 Protein Homology CDS 158761 160359 . + 0 ID=cds-WP_001295494.1;Parent=gene-AB11_RS11025;Dbxref=GenBank:WP_001295494.1;Name=WP_001295494.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AB11_RS11025;product=EAL domain-containing protein;protein_id=WP_001295494.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 160363 161919 . - . ID=gene-AB11_RS11030;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AB11_RS11030;old_locus_tag=AB11_1915 NZ_JHDH01000116.1 Protein Homology CDS 160363 161919 . - 0 ID=cds-WP_000394983.1;Parent=gene-AB11_RS11030;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AB11_RS11030;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 161907 162065 . - . ID=gene-AB11_RS25765;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AB11_RS25765 NZ_JHDH01000116.1 Protein Homology CDS 161907 162065 . - 0 ID=cds-WP_001327808.1;Parent=gene-AB11_RS25765;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AB11_RS25765;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 162382 163353 . + . ID=gene-AB11_RS11035;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AB11_RS11035;old_locus_tag=AB11_1916 NZ_JHDH01000116.1 Protein Homology CDS 162382 163353 . + 0 ID=cds-WP_000150543.1;Parent=gene-AB11_RS11035;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AB11_RS11035;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 163416 164216 . + . ID=gene-AB11_RS11040;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AB11_RS11040;old_locus_tag=AB11_1917 NZ_JHDH01000116.1 Protein Homology CDS 163416 164216 . + 0 ID=cds-WP_000406926.1;Parent=gene-AB11_RS11040;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AB11_RS11040;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 164229 165080 . + . ID=gene-AB11_RS11045;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AB11_RS11045;old_locus_tag=AB11_1918 NZ_JHDH01000116.1 Protein Homology CDS 164229 165080 . + 0 ID=cds-WP_000228655.1;Parent=gene-AB11_RS11045;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AB11_RS11045;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 165135 165593 . + . ID=gene-AB11_RS11050;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AB11_RS11050;old_locus_tag=AB11_1920 NZ_JHDH01000116.1 Protein Homology CDS 165135 165593 . + 0 ID=cds-WP_000156255.1;Parent=gene-AB11_RS11050;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AB11_RS11050;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 166022 166588 . + . ID=gene-AB11_RS11055;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AB11_RS11055;old_locus_tag=AB11_1921 NZ_JHDH01000116.1 Protein Homology CDS 166022 166588 . + 0 ID=cds-WP_001296134.1;Parent=gene-AB11_RS11055;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AB11_RS11055;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 166585 167394 . - . ID=gene-AB11_RS11060;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AB11_RS11060;old_locus_tag=AB11_1922 NZ_JHDH01000116.1 Protein Homology CDS 166585 167394 . - 0 ID=cds-WP_000010115.1;Parent=gene-AB11_RS11060;Dbxref=GenBank:WP_000010115.1;Name=WP_000010115.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AB11_RS11060;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 167560 167769 . - . ID=gene-AB11_RS11065;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB11_RS11065;old_locus_tag=AB11_1923 NZ_JHDH01000116.1 Protein Homology CDS 167560 167769 . - 0 ID=cds-WP_001062678.1;Parent=gene-AB11_RS11065;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AB11_RS11065;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JHDH01000116.1 RefSeq gene 167831 168951 . - . ID=gene-AB11_RS11070;Name=AB11_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11070;old_locus_tag=AB11_1924 NZ_JHDH01000116.1 Protein Homology CDS 168693 168951 . - 0 ID=cds-WP_087451024.1-2;Parent=gene-AB11_RS11070;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11070;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000116.1 Protein Homology CDS 167831 168693 . - 2 ID=cds-WP_087451024.1-2;Parent=gene-AB11_RS11070;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11070;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 ##sequence-region NZ_JHDH01000117.1 1 86198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000117.1 RefSeq region 1 86198 . + . ID=NZ_JHDH01000117.1:1..86198;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000117.1 RefSeq gene 5 1125 . - . ID=gene-AB11_RS11075;Name=AB11_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11075;old_locus_tag=AB11_1926 NZ_JHDH01000117.1 Protein Homology CDS 867 1125 . - 0 ID=cds-WP_087451024.1-3;Parent=gene-AB11_RS11075;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11075;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000117.1 Protein Homology CDS 5 867 . - 2 ID=cds-WP_087451024.1-3;Parent=gene-AB11_RS11075;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11075;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 1175 1324 . - . ID=gene-AB11_RS11080;Name=AB11_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11080;old_locus_tag=AB11_1928 NZ_JHDH01000117.1 Protein Homology CDS 1175 1324 . - 0 ID=cds-WP_032223399.1;Parent=gene-AB11_RS11080;Dbxref=GenBank:WP_032223399.1;Name=WP_032223399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AB11_RS11080;product=YobF family protein;protein_id=WP_032223399.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 1993 2280 . - . ID=gene-AB11_RS11085;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AB11_RS11085;old_locus_tag=AB11_1929 NZ_JHDH01000117.1 Protein Homology CDS 1993 2280 . - 0 ID=cds-WP_001006866.1;Parent=gene-AB11_RS11085;Dbxref=GenBank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AB11_RS11085;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 2355 2498 . - . ID=gene-AB11_RS11090;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AB11_RS11090;old_locus_tag=AB11_1930 NZ_JHDH01000117.1 Protein Homology CDS 2355 2498 . - 0 ID=cds-WP_000714550.1;Parent=gene-AB11_RS11090;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AB11_RS11090;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 2657 2896 . + . ID=gene-AB11_RS11095;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AB11_RS11095;old_locus_tag=AB11_1931 NZ_JHDH01000117.1 Protein Homology CDS 2657 2896 . + 0 ID=cds-WP_001211011.1;Parent=gene-AB11_RS11095;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AB11_RS11095;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 3039 3830 . - . ID=gene-AB11_RS11100;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AB11_RS11100;old_locus_tag=AB11_1932 NZ_JHDH01000117.1 Protein Homology CDS 3039 3830 . - 0 ID=cds-WP_001262182.1;Parent=gene-AB11_RS11100;Dbxref=GenBank:WP_001262182.1;Name=WP_001262182.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AB11_RS11100;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262182.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 4007 5380 . + . ID=gene-AB11_RS11105;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AB11_RS11105;old_locus_tag=AB11_1933 NZ_JHDH01000117.1 Protein Homology CDS 4007 5380 . + 0 ID=cds-WP_001351757.1;Parent=gene-AB11_RS11105;Dbxref=GenBank:WP_001351757.1;Name=WP_001351757.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AB11_RS11105;product=MFS transporter;protein_id=WP_001351757.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 5426 6307 . - . ID=gene-AB11_RS11110;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AB11_RS11110;old_locus_tag=AB11_1934 NZ_JHDH01000117.1 Protein Homology CDS 5426 6307 . - 0 ID=cds-WP_000984517.1;Parent=gene-AB11_RS11110;Dbxref=GenBank:WP_000984517.1;Name=WP_000984517.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AB11_RS11110;product=protease HtpX;protein_id=WP_000984517.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 6499 8547 . - . ID=gene-AB11_RS11115;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=AB11_RS11115;old_locus_tag=AB11_1935 NZ_JHDH01000117.1 Protein Homology CDS 6499 8547 . - 0 ID=cds-WP_001055779.1;Parent=gene-AB11_RS11115;Dbxref=GenBank:WP_001055779.1;Name=WP_001055779.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AB11_RS11115;product=carboxy terminal-processing peptidase;protein_id=WP_001055779.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 8567 9265 . - . ID=gene-AB11_RS11120;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AB11_RS11120;old_locus_tag=AB11_1936 NZ_JHDH01000117.1 Protein Homology CDS 8567 9265 . - 0 ID=cds-WP_000431370.1;Parent=gene-AB11_RS11120;Dbxref=GenBank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=AB11_RS11120;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 9362 9859 . - . ID=gene-AB11_RS11125;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AB11_RS11125;old_locus_tag=AB11_1937 NZ_JHDH01000117.1 Protein Homology CDS 9362 9859 . - 0 ID=cds-WP_001043882.1;Parent=gene-AB11_RS11125;Dbxref=GenBank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=AB11_RS11125;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 9989 11272 . + . ID=gene-AB11_RS11130;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AB11_RS11130;old_locus_tag=AB11_1938 NZ_JHDH01000117.1 Protein Homology CDS 9989 11272 . + 0 ID=cds-WP_001207283.1;Parent=gene-AB11_RS11130;Dbxref=GenBank:WP_001207283.1;Name=WP_001207283.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AB11_RS11130;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207283.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 11241 13874 . + . ID=gene-AB11_RS11135;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AB11_RS11135;old_locus_tag=AB11_1939 NZ_JHDH01000117.1 Protein Homology CDS 11241 13874 . + 0 ID=cds-WP_001297532.1;Parent=gene-AB11_RS11135;Dbxref=GenBank:WP_001297532.1;Name=WP_001297532.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AB11_RS11135;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001297532.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 13954 15393 . + . ID=gene-AB11_RS11140;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AB11_RS11140;old_locus_tag=AB11_1940 NZ_JHDH01000117.1 Protein Homology CDS 13954 15393 . + 0 ID=cds-WP_001695829.1;Parent=gene-AB11_RS11140;Dbxref=GenBank:WP_001695829.1;Name=WP_001695829.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AB11_RS11140;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001695829.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 15511 15747 . + . ID=gene-AB11_RS11145;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AB11_RS11145;old_locus_tag=AB11_1941 NZ_JHDH01000117.1 Protein Homology CDS 15511 15747 . + 0 ID=cds-WP_001295499.1;Parent=gene-AB11_RS11145;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AB11_RS11145;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 15852 16043 . + . ID=gene-AB11_RS11150;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AB11_RS11150;old_locus_tag=AB11_1942 NZ_JHDH01000117.1 Protein Homology CDS 15852 16043 . + 0 ID=cds-WP_001313035.1;Parent=gene-AB11_RS11150;Dbxref=GenBank:WP_001313035.1;Name=WP_001313035.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AB11_RS11150;product=YebW family protein;protein_id=WP_001313035.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 16044 16700 . - . ID=gene-AB11_RS11155;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AB11_RS11155;old_locus_tag=AB11_1943 NZ_JHDH01000117.1 Protein Homology CDS 16044 16700 . - 0 ID=cds-WP_032223402.1;Parent=gene-AB11_RS11155;Dbxref=GenBank:WP_032223402.1;Name=WP_032223402.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310575.2;locus_tag=AB11_RS11155;product=protein-serine/threonine phosphatase;protein_id=WP_032223402.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 17096 17437 . - . ID=gene-AB11_RS11160;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AB11_RS11160;old_locus_tag=AB11_1944 NZ_JHDH01000117.1 Protein Homology CDS 17096 17437 . - 0 ID=cds-WP_000976472.1;Parent=gene-AB11_RS11160;Dbxref=GenBank:WP_000976472.1;Name=WP_000976472.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AB11_RS11160;product=YebY family protein;protein_id=WP_000976472.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 17450 18322 . - . ID=gene-AB11_RS11165;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AB11_RS11165;old_locus_tag=AB11_1945 NZ_JHDH01000117.1 Protein Homology CDS 17450 18322 . - 0 ID=cds-WP_000879295.1;Parent=gene-AB11_RS11165;Dbxref=GenBank:WP_000879295.1;Name=WP_000879295.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AB11_RS11165;product=copper homeostasis membrane protein CopD;protein_id=WP_000879295.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 18326 18700 . - . ID=gene-AB11_RS11170;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AB11_RS11170;old_locus_tag=AB11_1946 NZ_JHDH01000117.1 Protein Homology CDS 18326 18700 . - 0 ID=cds-WP_000168747.1;Parent=gene-AB11_RS11170;Dbxref=GenBank:WP_000168747.1;Name=WP_000168747.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AB11_RS11170;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 18839 19069 . + . ID=gene-AB11_RS11175;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AB11_RS11175;old_locus_tag=AB11_1947 NZ_JHDH01000117.1 Protein Homology CDS 18839 19069 . + 0 ID=cds-WP_000916763.1;Parent=gene-AB11_RS11175;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AB11_RS11175;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 19171 19827 . + . ID=gene-AB11_RS11180;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AB11_RS11180;old_locus_tag=AB11_1948 NZ_JHDH01000117.1 Protein Homology CDS 19171 19827 . + 0 ID=cds-WP_000011656.1;Parent=gene-AB11_RS11180;Dbxref=GenBank:WP_000011656.1;Name=WP_000011656.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310580.1;locus_tag=AB11_RS11180;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011656.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 19851 20513 . + . ID=gene-AB11_RS11185;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AB11_RS11185;old_locus_tag=AB11_1949 NZ_JHDH01000117.1 Protein Homology CDS 19851 20513 . + 0 ID=cds-WP_000944256.1;Parent=gene-AB11_RS11185;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AB11_RS11185;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 20510 22570 . - . ID=gene-AB11_RS11190;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AB11_RS11190;old_locus_tag=AB11_1950 NZ_JHDH01000117.1 Protein Homology CDS 20510 22570 . - 0 ID=cds-WP_032223403.1;Parent=gene-AB11_RS11190;Dbxref=GenBank:WP_032223403.1;Name=WP_032223403.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936916.1;locus_tag=AB11_RS11190;product=oligopeptidase B;protein_id=WP_032223403.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 22779 23438 . - . ID=gene-AB11_RS11195;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AB11_RS11195;old_locus_tag=AB11_1951 NZ_JHDH01000117.1 Protein Homology CDS 22779 23438 . - 0 ID=cds-WP_000024741.1;Parent=gene-AB11_RS11195;Dbxref=GenBank:WP_000024741.1;Name=WP_000024741.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AB11_RS11195;product=tellurite resistance TerB family protein;protein_id=WP_000024741.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 23762 24118 . - . ID=gene-AB11_RS11200;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AB11_RS11200;old_locus_tag=AB11_1952 NZ_JHDH01000117.1 Protein Homology CDS 23762 24118 . - 0 ID=cds-WP_024257732.1;Parent=gene-AB11_RS11200;Dbxref=GenBank:WP_024257732.1;Name=WP_024257732.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AB11_RS11200;product=protein YebF;protein_id=WP_024257732.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 24185 24475 . - . ID=gene-AB11_RS11205;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AB11_RS11205;old_locus_tag=AB11_1953 NZ_JHDH01000117.1 Protein Homology CDS 24185 24475 . - 0 ID=cds-WP_000257738.1;Parent=gene-AB11_RS11205;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AB11_RS11205;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 24609 25787 . + . ID=gene-AB11_RS11210;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AB11_RS11210;old_locus_tag=AB11_1954 NZ_JHDH01000117.1 Protein Homology CDS 24609 25787 . + 0 ID=cds-WP_000173474.1;Parent=gene-AB11_RS11210;Dbxref=GenBank:WP_000173474.1;Name=WP_000173474.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=AB11_RS11210;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173474.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 25843 26484 . - . ID=gene-AB11_RS11215;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AB11_RS11215;old_locus_tag=AB11_1955 NZ_JHDH01000117.1 Protein Homology CDS 25843 26484 . - 0 ID=cds-WP_000800512.1;Parent=gene-AB11_RS11215;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AB11_RS11215;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 26521 28332 . - . ID=gene-AB11_RS11220;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AB11_RS11220;old_locus_tag=AB11_1956 NZ_JHDH01000117.1 Protein Homology CDS 26521 28332 . - 0 ID=cds-WP_001069467.1;Parent=gene-AB11_RS11220;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AB11_RS11220;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 28567 30042 . - . ID=gene-AB11_RS11225;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AB11_RS11225;old_locus_tag=AB11_1957 NZ_JHDH01000117.1 Protein Homology CDS 28567 30042 . - 0 ID=cds-WP_000301727.1;Parent=gene-AB11_RS11225;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AB11_RS11225;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 30380 31249 . + . ID=gene-AB11_RS11230;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AB11_RS11230;old_locus_tag=AB11_1959 NZ_JHDH01000117.1 Protein Homology CDS 30380 31249 . + 0 ID=cds-WP_001056694.1;Parent=gene-AB11_RS11230;Dbxref=GenBank:WP_001056694.1;Name=WP_001056694.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310590.1;locus_tag=AB11_RS11230;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056694.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 31377 32819 . + . ID=gene-AB11_RS11235;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AB11_RS11235;old_locus_tag=AB11_1960 NZ_JHDH01000117.1 Protein Homology CDS 31377 32819 . + 0 ID=cds-WP_000091148.1;Parent=gene-AB11_RS11235;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AB11_RS11235;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 32950 33921 . - . ID=gene-AB11_RS11240;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AB11_RS11240;old_locus_tag=AB11_1961 NZ_JHDH01000117.1 Protein Homology CDS 32950 33921 . - 0 ID=cds-WP_001313037.1;Parent=gene-AB11_RS11240;Dbxref=GenBank:WP_001313037.1;Name=WP_001313037.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AB11_RS11240;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_001313037.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 34040 35362 . - . ID=gene-AB11_RS11245;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AB11_RS11245;old_locus_tag=AB11_1962 NZ_JHDH01000117.1 Protein Homology CDS 34040 35362 . - 0 ID=cds-WP_001184045.1;Parent=gene-AB11_RS11245;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AB11_RS11245;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 35378 36310 . - . ID=gene-AB11_RS11250;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AB11_RS11250;old_locus_tag=AB11_1963 NZ_JHDH01000117.1 Protein Homology CDS 35378 36310 . - 0 ID=cds-WP_001695833.1;Parent=gene-AB11_RS11250;Dbxref=GenBank:WP_001695833.1;Name=WP_001695833.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AB11_RS11250;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001695833.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 36389 37144 . + . ID=gene-AB11_RS11255;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AB11_RS11255;old_locus_tag=AB11_1964 NZ_JHDH01000117.1 Protein Homology CDS 36389 37144 . + 0 ID=cds-WP_000202983.1;Parent=gene-AB11_RS11255;Dbxref=GenBank:WP_000202983.1;Name=WP_000202983.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AB11_RS11255;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202983.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 37141 37926 . + . ID=gene-AB11_RS11260;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AB11_RS11260;old_locus_tag=AB11_1965 NZ_JHDH01000117.1 Protein Homology CDS 37141 37926 . + 0 ID=cds-WP_000571478.1;Parent=gene-AB11_RS11260;Dbxref=GenBank:WP_000571478.1;Name=WP_000571478.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310596.1;locus_tag=AB11_RS11260;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571478.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 38070 39080 . - . ID=gene-AB11_RS11265;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AB11_RS11265;old_locus_tag=AB11_1966 NZ_JHDH01000117.1 Protein Homology CDS 38070 39080 . - 0 ID=cds-WP_000568519.1;Parent=gene-AB11_RS11265;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AB11_RS11265;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 39089 39700 . - . ID=gene-AB11_RS11270;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AB11_RS11270;old_locus_tag=AB11_1967 NZ_JHDH01000117.1 Protein Homology CDS 39089 39700 . - 0 ID=cds-WP_000580323.1;Parent=gene-AB11_RS11270;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AB11_RS11270;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 39839 39904 . - . ID=gene-AB11_RS11275;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AB11_RS11275 NZ_JHDH01000117.1 Protein Homology CDS 39839 39904 . - 0 ID=cds-WP_010723105.1;Parent=gene-AB11_RS11275;Dbxref=GenBank:WP_010723105.1;Name=WP_010723105.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AB11_RS11275;product=stress response small protein YobI;protein_id=WP_010723105.1;transl_table=11 NZ_JHDH01000117.1 RefSeq pseudogene 39976 40578 . + . ID=gene-AB11_RS11280;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=pseudogene;locus_tag=AB11_RS11280;pseudo=true NZ_JHDH01000117.1 Protein Homology CDS 39976 40578 . + 0 ID=cds-AB11_RS11280;Parent=gene-AB11_RS11280;Note=internal stop;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AB11_RS11280;product=YebB family permuted papain-like enzyme;pseudo=true;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 40580 41101 . - . ID=gene-AB11_RS11285;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AB11_RS11285;old_locus_tag=AB11_1970 NZ_JHDH01000117.1 Protein Homology CDS 40580 41101 . - 0 ID=cds-WP_001295503.1;Parent=gene-AB11_RS11285;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AB11_RS11285;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 41136 41876 . - . ID=gene-AB11_RS11290;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AB11_RS11290;old_locus_tag=AB11_1971 NZ_JHDH01000117.1 Protein Homology CDS 41136 41876 . - 0 ID=cds-WP_000907248.1;Parent=gene-AB11_RS11290;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AB11_RS11290;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 41905 42357 . - . ID=gene-AB11_RS11295;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AB11_RS11295;old_locus_tag=AB11_1972 NZ_JHDH01000117.1 Protein Homology CDS 41905 42357 . - 0 ID=cds-WP_001300367.1;Parent=gene-AB11_RS11295;Dbxref=GenBank:WP_001300367.1;Name=WP_001300367.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AB11_RS11295;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 42475 44247 . - . ID=gene-AB11_RS11300;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AB11_RS11300;old_locus_tag=AB11_1973 NZ_JHDH01000117.1 Protein Homology CDS 42475 44247 . - 0 ID=cds-WP_001258662.1;Parent=gene-AB11_RS11300;Dbxref=GenBank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AB11_RS11300;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 44557 45123 . + . ID=gene-AB11_RS11305;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AB11_RS11305;old_locus_tag=AB11_1974 NZ_JHDH01000117.1 Protein Homology CDS 44557 45123 . + 0 ID=cds-WP_000891620.1;Parent=gene-AB11_RS11305;Dbxref=GenBank:WP_000891620.1;Name=WP_000891620.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AB11_RS11305;product=hydrolase;protein_id=WP_000891620.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 45120 45938 . + . ID=gene-AB11_RS11310;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AB11_RS11310;old_locus_tag=AB11_1975 NZ_JHDH01000117.1 Protein Homology CDS 45120 45938 . + 0 ID=cds-WP_000639274.1;Parent=gene-AB11_RS11310;Dbxref=GenBank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AB11_RS11310;product=DUF72 domain-containing protein;protein_id=WP_000639274.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 45991 46386 . + . ID=gene-AB11_RS11315;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AB11_RS11315;old_locus_tag=AB11_1976 NZ_JHDH01000117.1 Protein Homology CDS 45991 46386 . + 0 ID=cds-WP_000252980.1;Parent=gene-AB11_RS11315;Dbxref=GenBank:WP_000252980.1;Name=WP_000252980.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AB11_RS11315;product=MAPEG family protein;protein_id=WP_000252980.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 46427 47170 . + . ID=gene-AB11_RS11320;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AB11_RS11320;old_locus_tag=AB11_1977 NZ_JHDH01000117.1 Protein Homology CDS 46427 47170 . + 0 ID=cds-WP_000019588.1;Parent=gene-AB11_RS11320;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AB11_RS11320;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 47167 48138 . + . ID=gene-AB11_RS11325;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AB11_RS11325;old_locus_tag=AB11_1978 NZ_JHDH01000117.1 Protein Homology CDS 47167 48138 . + 0 ID=cds-WP_000564727.1;Parent=gene-AB11_RS11325;Dbxref=GenBank:WP_000564727.1;Name=WP_000564727.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416385.1;locus_tag=AB11_RS11325;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564727.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 48303 50732 . - . ID=gene-AB11_RS11330;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AB11_RS11330;old_locus_tag=AB11_1979 NZ_JHDH01000117.1 Protein Homology CDS 48303 50732 . - 0 ID=cds-WP_000176817.1;Parent=gene-AB11_RS11330;Dbxref=GenBank:WP_000176817.1;Name=WP_000176817.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AB11_RS11330;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_000176817.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 50757 51857 . - . ID=gene-AB11_RS11335;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AB11_RS11335;old_locus_tag=AB11_1980 NZ_JHDH01000117.1 Protein Homology CDS 50757 51857 . - 0 ID=cds-WP_001214278.1;Parent=gene-AB11_RS11335;Dbxref=GenBank:WP_001214278.1;Name=WP_001214278.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310610.1;locus_tag=AB11_RS11335;product=NapC/NirT family cytochrome c;protein_id=WP_001214278.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 52245 52991 . - . ID=gene-AB11_RS11340;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AB11_RS11340;old_locus_tag=AB11_1981 NZ_JHDH01000117.1 Protein Homology CDS 52245 52991 . - 0 ID=cds-WP_001185744.1;Parent=gene-AB11_RS11340;Dbxref=GenBank:WP_001185744.1;Name=WP_001185744.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AB11_RS11340;product=copper homeostasis protein CutC;protein_id=WP_001185744.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 53005 53571 . - . ID=gene-AB11_RS11345;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AB11_RS11345;old_locus_tag=AB11_1982 NZ_JHDH01000117.1 Protein Homology CDS 53005 53571 . - 0 ID=cds-WP_001307851.1;Parent=gene-AB11_RS11345;Dbxref=GenBank:WP_001307851.1;Name=WP_001307851.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AB11_RS11345;product=VOC family protein;protein_id=WP_001307851.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 53787 55520 . + . ID=gene-AB11_RS11350;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AB11_RS11350;old_locus_tag=AB11_1983 NZ_JHDH01000117.1 Protein Homology CDS 53787 55520 . + 0 ID=cds-WP_001025322.1;Parent=gene-AB11_RS11350;Dbxref=GenBank:WP_001025322.1;Name=WP_001025322.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AB11_RS11350;product=arginine--tRNA ligase;protein_id=WP_001025322.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 55562 55606 . - . ID=gene-AB11_RS25335;Name=AB11_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25335 NZ_JHDH01000117.1 Protein Homology CDS 55562 55606 . - 0 ID=cds-WP_212734366.1;Parent=gene-AB11_RS25335;Dbxref=GenBank:WP_212734366.1;Name=WP_212734366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AB11_RS25335;product=hypothetical protein;protein_id=WP_212734366.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 55697 56185 . + . ID=gene-AB11_RS11355;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AB11_RS11355;old_locus_tag=AB11_1984 NZ_JHDH01000117.1 Protein Homology CDS 55697 56185 . + 0 ID=cds-WP_001307852.1;Parent=gene-AB11_RS11355;Dbxref=GenBank:WP_001307852.1;Name=WP_001307852.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707765.1;locus_tag=AB11_RS11355;product=lysozyme inhibitor LprI family protein;protein_id=WP_001307852.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 56306 56698 . - . ID=gene-AB11_RS11360;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AB11_RS11360;old_locus_tag=AB11_1985 NZ_JHDH01000117.1 Protein Homology CDS 56306 56698 . - 0 ID=cds-WP_001259577.1;Parent=gene-AB11_RS11360;Dbxref=GenBank:WP_001259577.1;Name=WP_001259577.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AB11_RS11360;product=flagellar protein FlhE;protein_id=WP_001259577.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 56698 58776 . - . ID=gene-AB11_RS11365;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB11_RS11365;old_locus_tag=AB11_1986 NZ_JHDH01000117.1 Protein Homology CDS 56698 58776 . - 0 ID=cds-WP_000066966.1;Parent=gene-AB11_RS11365;Dbxref=GenBank:WP_000066966.1;Name=WP_000066966.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310616.1;locus_tag=AB11_RS11365;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066966.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 58769 59917 . - . ID=gene-AB11_RS11370;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AB11_RS11370;old_locus_tag=AB11_1987 NZ_JHDH01000117.1 Protein Homology CDS 58769 59917 . - 0 ID=cds-WP_001278937.1;Parent=gene-AB11_RS11370;Dbxref=GenBank:WP_001278937.1;Name=WP_001278937.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AB11_RS11370;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278937.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 60119 60763 . - . ID=gene-AB11_RS11375;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AB11_RS11375;old_locus_tag=AB11_1989 NZ_JHDH01000117.1 Protein Homology CDS 60119 60763 . - 0 ID=cds-WP_000983609.1;Parent=gene-AB11_RS11375;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AB11_RS11375;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 60774 61163 . - . ID=gene-AB11_RS11380;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AB11_RS11380;old_locus_tag=AB11_1990 NZ_JHDH01000117.1 Protein Homology CDS 60774 61163 . - 0 ID=cds-WP_000763867.1;Parent=gene-AB11_RS11380;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AB11_RS11380;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 61178 62227 . - . ID=gene-AB11_RS11385;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AB11_RS11385;old_locus_tag=AB11_1991 NZ_JHDH01000117.1 Protein Homology CDS 61178 62227 . - 0 ID=cds-WP_000036371.1;Parent=gene-AB11_RS11385;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AB11_RS11385;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 62230 63090 . - . ID=gene-AB11_RS11390;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AB11_RS11390;old_locus_tag=AB11_1992 NZ_JHDH01000117.1 Protein Homology CDS 62230 63090 . - 0 ID=cds-WP_000204337.1;Parent=gene-AB11_RS11390;Dbxref=GenBank:WP_000204337.1;Name=WP_000204337.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AB11_RS11390;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204337.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 63109 64710 . - . ID=gene-AB11_RS11395;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB11_RS11395;old_locus_tag=AB11_1993 NZ_JHDH01000117.1 Protein Homology CDS 63109 64710 . - 0 ID=cds-WP_000483239.1;Parent=gene-AB11_RS11395;Dbxref=GenBank:WP_000483239.1;Name=WP_000483239.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AB11_RS11395;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483239.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 64756 66417 . - . ID=gene-AB11_RS11400;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AB11_RS11400;old_locus_tag=AB11_1994 NZ_JHDH01000117.1 Protein Homology CDS 64756 66417 . - 0 ID=cds-WP_001313042.1;Parent=gene-AB11_RS11400;Dbxref=GenBank:WP_001313042.1;Name=WP_001313042.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AB11_RS11400;product=methyl-accepting chemotaxis protein II;protein_id=WP_001313042.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 66562 67065 . - . ID=gene-AB11_RS11405;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AB11_RS11405;old_locus_tag=AB11_1995 NZ_JHDH01000117.1 Protein Homology CDS 66562 67065 . - 0 ID=cds-WP_000147302.1;Parent=gene-AB11_RS11405;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AB11_RS11405;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 67086 69050 . - . ID=gene-AB11_RS11410;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AB11_RS11410;old_locus_tag=AB11_1996 NZ_JHDH01000117.1 Protein Homology CDS 67086 69050 . - 0 ID=cds-WP_077699291.1;Parent=gene-AB11_RS11410;Dbxref=GenBank:WP_077699291.1;Name=WP_077699291.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310625.1;locus_tag=AB11_RS11410;product=chemotaxis protein CheA;protein_id=WP_077699291.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 69055 69981 . - . ID=gene-AB11_RS11415;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AB11_RS11415;old_locus_tag=AB11_1997 NZ_JHDH01000117.1 Protein Homology CDS 69055 69981 . - 0 ID=cds-WP_000795630.1;Parent=gene-AB11_RS11415;Dbxref=GenBank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AB11_RS11415;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 69978 70865 . - . ID=gene-AB11_RS11420;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AB11_RS11420;old_locus_tag=AB11_1998 NZ_JHDH01000117.1 Protein Homology CDS 69978 70865 . - 0 ID=cds-WP_000906329.1;Parent=gene-AB11_RS11420;Dbxref=GenBank:WP_000906329.1;Name=WP_000906329.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310627.1;locus_tag=AB11_RS11420;product=flagellar motor stator protein MotA;protein_id=WP_000906329.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 70992 71570 . - . ID=gene-AB11_RS11425;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AB11_RS11425;old_locus_tag=AB11_1999 NZ_JHDH01000117.1 Protein Homology CDS 70992 71570 . - 0 ID=cds-WP_001291588.1;Parent=gene-AB11_RS11425;Dbxref=GenBank:WP_001291588.1;Name=WP_001291588.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AB11_RS11425;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291588.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 71573 71923 . - . ID=gene-AB11_RS11430;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AB11_RS11430;old_locus_tag=AB11_2000 NZ_JHDH01000117.1 Protein Homology CDS 71573 71923 . - 0 ID=cds-WP_001295647.1;Parent=gene-AB11_RS11430;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AB11_RS11430;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 72702 73130 . + . ID=gene-AB11_RS11435;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AB11_RS11435;old_locus_tag=AB11_2001 NZ_JHDH01000117.1 Protein Homology CDS 72702 73130 . + 0 ID=cds-WP_000122426.1;Parent=gene-AB11_RS11435;Dbxref=GenBank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AB11_RS11435;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 73137 74561 . - . ID=gene-AB11_RS11440;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AB11_RS11440;old_locus_tag=AB11_2002 NZ_JHDH01000117.1 Protein Homology CDS 73137 74561 . - 0 ID=cds-WP_001295646.1;Parent=gene-AB11_RS11440;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AB11_RS11440;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 74536 75336 . - . ID=gene-AB11_RS11445;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AB11_RS11445;old_locus_tag=AB11_2003 NZ_JHDH01000117.1 Protein Homology CDS 74536 75336 . - 0 ID=cds-WP_001336489.1;Parent=gene-AB11_RS11445;Dbxref=GenBank:WP_001336489.1;Name=WP_001336489.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AB11_RS11445;product=trehalose-phosphatase;protein_id=WP_001336489.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 75503 76489 . - . ID=gene-AB11_RS11450;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AB11_RS11450;old_locus_tag=AB11_2004 NZ_JHDH01000117.1 Protein Homology CDS 75503 76489 . - 0 ID=cds-WP_001301339.1;Parent=gene-AB11_RS11450;Dbxref=GenBank:WP_001301339.1;Name=WP_001301339.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AB11_RS11450;product=arabinose ABC transporter permease AraH;protein_id=WP_001301339.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 76504 78018 . - . ID=gene-AB11_RS11455;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AB11_RS11455;old_locus_tag=AB11_2005 NZ_JHDH01000117.1 Protein Homology CDS 76504 78018 . - 0 ID=cds-WP_001187810.1;Parent=gene-AB11_RS11455;Dbxref=GenBank:WP_001187810.1;Name=WP_001187810.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AB11_RS11455;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187810.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 78088 79077 . - . ID=gene-AB11_RS11460;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AB11_RS11460;old_locus_tag=AB11_2006 NZ_JHDH01000117.1 Protein Homology CDS 78088 79077 . - 0 ID=cds-WP_000548675.1;Parent=gene-AB11_RS11460;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AB11_RS11460;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 79874 80377 . + . ID=gene-AB11_RS11465;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AB11_RS11465;old_locus_tag=AB11_2007 NZ_JHDH01000117.1 Protein Homology CDS 79874 80377 . + 0 ID=cds-WP_000179469.1;Parent=gene-AB11_RS11465;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AB11_RS11465;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 80456 80707 . - . ID=gene-AB11_RS11470;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AB11_RS11470;old_locus_tag=AB11_2008 NZ_JHDH01000117.1 Protein Homology CDS 80456 80707 . - 0 ID=cds-WP_000082117.1;Parent=gene-AB11_RS11470;Dbxref=GenBank:WP_000082117.1;Name=WP_000082117.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AB11_RS11470;product=DUF2766 family protein YecJ;protein_id=WP_000082117.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 80822 80908 . - . ID=gene-AB11_RS11475;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AB11_RS11475 NZ_JHDH01000117.1 Protein Homology CDS 80822 80908 . - 0 ID=cds-WP_010723106.1;Parent=gene-AB11_RS11475;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AB11_RS11475;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 81170 81493 . + . ID=gene-AB11_RS11480;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AB11_RS11480;old_locus_tag=AB11_2010 NZ_JHDH01000117.1 Protein Homology CDS 81170 81493 . + 0 ID=cds-WP_021530502.1;Parent=gene-AB11_RS11480;Dbxref=GenBank:WP_021530502.1;Name=WP_021530502.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AB11_RS11480;product=YecR-like lipofamily protein;protein_id=WP_021530502.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 81665 82162 . + . ID=gene-AB11_RS11485;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AB11_RS11485;old_locus_tag=AB11_2012 NZ_JHDH01000117.1 Protein Homology CDS 81665 82162 . + 0 ID=cds-WP_000917208.1;Parent=gene-AB11_RS11485;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AB11_RS11485;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 82199 82438 . - . ID=gene-AB11_RS11490;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AB11_RS11490;old_locus_tag=AB11_2013 NZ_JHDH01000117.1 Protein Homology CDS 82199 82438 . - 0 ID=cds-WP_000377224.1;Parent=gene-AB11_RS11490;Dbxref=GenBank:WP_000377224.1;Name=WP_000377224.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AB11_RS11490;product=YecH family metal-binding protein;protein_id=WP_000377224.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 82630 83841 . + . ID=gene-AB11_RS11495;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AB11_RS11495;old_locus_tag=AB11_2015 NZ_JHDH01000117.1 Protein Homology CDS 82630 83841 . + 0 ID=cds-WP_000797573.1;Parent=gene-AB11_RS11495;Dbxref=GenBank:WP_000797573.1;Name=WP_000797573.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AB11_RS11495;product=tyrosine transporter TyrP;protein_id=WP_000797573.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 83903 84568 . - . ID=gene-AB11_RS11500;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AB11_RS11500;old_locus_tag=AB11_2016 NZ_JHDH01000117.1 Protein Homology CDS 83903 84568 . - 0 ID=cds-WP_000847902.1;Parent=gene-AB11_RS11500;Dbxref=GenBank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=AB11_RS11500;product=UPF0149 family protein YecA;protein_id=WP_000847902.1;transl_table=11 NZ_JHDH01000117.1 RefSeq gene 85074 86194 . + . ID=gene-AB11_RS11505;Name=AB11_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11505;old_locus_tag=AB11_2018 NZ_JHDH01000117.1 Protein Homology CDS 85074 85332 . + 0 ID=cds-WP_087451024.1-4;Parent=gene-AB11_RS11505;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11505;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000117.1 Protein Homology CDS 85332 86194 . + 2 ID=cds-WP_087451024.1-4;Parent=gene-AB11_RS11505;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11505;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 ##sequence-region NZ_JHDH01000118.1 1 24856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000118.1 RefSeq region 1 24856 . + . ID=NZ_JHDH01000118.1:1..24856;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000118.1 RefSeq gene 40 1160 . + . ID=gene-AB11_RS11510;Name=AB11_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11510;old_locus_tag=AB11_2020 NZ_JHDH01000118.1 Protein Homology CDS 40 298 . + 0 ID=cds-WP_087451024.1-5;Parent=gene-AB11_RS11510;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11510;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000118.1 Protein Homology CDS 298 1160 . + 2 ID=cds-WP_087451024.1-5;Parent=gene-AB11_RS11510;Dbxref=GenBank:WP_087451024.1;Name=WP_087451024.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS11510;product=IS3-like element ISSen4 family transposase;protein_id=WP_087451024.1;transl_table=11 NZ_JHDH01000118.1 RefSeq pseudogene 1190 1504 . + . ID=gene-AB11_RS11515;Name=AB11_RS11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS11515;old_locus_tag=AB11_2021;partial=true;pseudo=true;start_range=.,1190 NZ_JHDH01000118.1 Protein Homology CDS 1190 1504 . + 0 ID=cds-AB11_RS11515;Parent=gene-AB11_RS11515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS11515;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1190;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 1603 2070 . - . ID=gene-AB11_RS11520;Name=AB11_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11520;old_locus_tag=AB11_2022 NZ_JHDH01000118.1 Protein Homology CDS 1603 2070 . - 0 ID=cds-WP_000824288.1;Parent=gene-AB11_RS11520;Dbxref=GenBank:WP_000824288.1;Name=WP_000824288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824288.1;locus_tag=AB11_RS11520;product=TIR domain-containing protein;protein_id=WP_000824288.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 2073 3518 . - . ID=gene-AB11_RS11525;Name=AB11_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11525;old_locus_tag=AB11_2023 NZ_JHDH01000118.1 Protein Homology CDS 2073 3518 . - 0 ID=cds-WP_032197579.1;Parent=gene-AB11_RS11525;Dbxref=GenBank:WP_032197579.1;Name=WP_032197579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519853.1;locus_tag=AB11_RS11525;product=SIR2 family protein;protein_id=WP_032197579.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 3932 4192 . + . ID=gene-AB11_RS11530;Name=AB11_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11530 NZ_JHDH01000118.1 Protein Homology CDS 3932 4192 . + 0 ID=cds-WP_000488111.1;Parent=gene-AB11_RS11530;Dbxref=GenBank:WP_000488111.1;Name=WP_000488111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001512982.1;locus_tag=AB11_RS11530;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000488111.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 4384 4524 . + . ID=gene-AB11_RS11535;Name=AB11_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11535;old_locus_tag=AB11_2024 NZ_JHDH01000118.1 Protein Homology CDS 4384 4524 . + 0 ID=cds-WP_000078916.1;Parent=gene-AB11_RS11535;Dbxref=GenBank:WP_000078916.1;Name=WP_000078916.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078918.1;locus_tag=AB11_RS11535;product=Hok/Gef family protein;protein_id=WP_000078916.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 4714 4995 . - . ID=gene-AB11_RS11540;Name=AB11_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11540 NZ_JHDH01000118.1 Protein Homology CDS 4714 4995 . - 0 ID=cds-WP_071527557.1;Parent=gene-AB11_RS11540;Dbxref=GenBank:WP_071527557.1;Name=WP_071527557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305382.1;locus_tag=AB11_RS11540;product=hypothetical protein;protein_id=WP_071527557.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 5535 5621 . - . ID=gene-AB11_RS11545;Name=AB11_RS11545;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11545;old_locus_tag=AB11_2025 NZ_JHDH01000118.1 tRNAscan-SE tRNA 5535 5621 . - . ID=rna-AB11_RS11545;Parent=gene-AB11_RS11545;anticodon=(pos:complement(5585..5587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11545;product=tRNA-Leu NZ_JHDH01000118.1 tRNAscan-SE exon 5535 5621 . - . ID=exon-AB11_RS11545-1;Parent=rna-AB11_RS11545;anticodon=(pos:complement(5585..5587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11545;product=tRNA-Leu NZ_JHDH01000118.1 RefSeq gene 5634 5707 . - . ID=gene-AB11_RS11550;Name=AB11_RS11550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11550;old_locus_tag=AB11_2026 NZ_JHDH01000118.1 tRNAscan-SE tRNA 5634 5707 . - . ID=rna-AB11_RS11550;Parent=gene-AB11_RS11550;anticodon=(pos:complement(5673..5675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11550;product=tRNA-Cys NZ_JHDH01000118.1 tRNAscan-SE exon 5634 5707 . - . ID=exon-AB11_RS11550-1;Parent=rna-AB11_RS11550;anticodon=(pos:complement(5673..5675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11550;product=tRNA-Cys NZ_JHDH01000118.1 RefSeq gene 5762 5837 . - . ID=gene-AB11_RS11555;Name=AB11_RS11555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11555;old_locus_tag=AB11_2027 NZ_JHDH01000118.1 tRNAscan-SE tRNA 5762 5837 . - . ID=rna-AB11_RS11555;Parent=gene-AB11_RS11555;anticodon=(pos:complement(5802..5804));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11555;product=tRNA-Gly NZ_JHDH01000118.1 tRNAscan-SE exon 5762 5837 . - . ID=exon-AB11_RS11555-1;Parent=rna-AB11_RS11555;anticodon=(pos:complement(5802..5804));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11555;product=tRNA-Gly NZ_JHDH01000118.1 RefSeq gene 5989 6537 . - . ID=gene-AB11_RS11560;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AB11_RS11560;old_locus_tag=AB11_2028 NZ_JHDH01000118.1 Protein Homology CDS 5989 6537 . - 0 ID=cds-WP_032223418.1;Parent=gene-AB11_RS11560;Dbxref=GenBank:WP_032223418.1;Name=WP_032223418.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AB11_RS11560;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_032223418.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 6594 8426 . - . ID=gene-AB11_RS11565;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AB11_RS11565;old_locus_tag=AB11_2029 NZ_JHDH01000118.1 Protein Homology CDS 6594 8426 . - 0 ID=cds-WP_001283421.1;Parent=gene-AB11_RS11565;Dbxref=GenBank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AB11_RS11565;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 8423 9079 . - . ID=gene-AB11_RS11570;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AB11_RS11570;old_locus_tag=AB11_2030 NZ_JHDH01000118.1 Protein Homology CDS 8423 9079 . - 0 ID=cds-WP_000611335.1;Parent=gene-AB11_RS11570;Dbxref=GenBank:WP_000611335.1;Name=WP_000611335.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416424.1;locus_tag=AB11_RS11570;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611335.1;transl_table=11 NZ_JHDH01000118.1 RefSeq pseudogene 9221 9292 . + . ID=gene-AB11_RS25770;Name=AB11_RS25770;end_range=9292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25770;partial=true;pseudo=true NZ_JHDH01000118.1 Protein Homology CDS 9221 9292 . + 0 ID=cds-AB11_RS25770;Parent=gene-AB11_RS25770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AB11_RS25770;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 9375 9551 . + . ID=gene-AB11_RS11575;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AB11_RS11575 NZ_JHDH01000118.1 Protein Homology CDS 9375 9551 . + 0 ID=cds-WP_001326718.1;Parent=gene-AB11_RS11575;Dbxref=GenBank:WP_001326718.1;Name=WP_001326718.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AB11_RS11575;product=protein YecU;protein_id=WP_001326718.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 9538 9762 . + . ID=gene-AB11_RS11580;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AB11_RS11580;old_locus_tag=AB11_2032 NZ_JHDH01000118.1 Protein Homology CDS 9538 9762 . + 0 ID=cds-WP_000106474.1;Parent=gene-AB11_RS11580;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AB11_RS11580;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 9829 10551 . - . ID=gene-AB11_RS11585;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AB11_RS11585;old_locus_tag=AB11_2033 NZ_JHDH01000118.1 Protein Homology CDS 9829 10551 . - 0 ID=cds-WP_001154267.1;Parent=gene-AB11_RS11585;Dbxref=GenBank:WP_001154267.1;Name=WP_001154267.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AB11_RS11585;product=transcriptional regulator SdiA;protein_id=WP_001154267.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 10781 11533 . - . ID=gene-AB11_RS11590;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AB11_RS11590;old_locus_tag=AB11_2034 NZ_JHDH01000118.1 Protein Homology CDS 10781 11533 . - 0 ID=cds-WP_001272994.1;Parent=gene-AB11_RS11590;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AB11_RS11590;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 11530 12198 . - . ID=gene-AB11_RS11595;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AB11_RS11595;old_locus_tag=AB11_2035 NZ_JHDH01000118.1 Protein Homology CDS 11530 12198 . - 0 ID=cds-WP_001158218.1;Parent=gene-AB11_RS11595;Dbxref=GenBank:WP_001158218.1;Name=WP_001158218.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AB11_RS11595;product=cystine ABC transporter permease;protein_id=WP_001158218.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 12213 13199 . - . ID=gene-AB11_RS11600;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AB11_RS11600;old_locus_tag=AB11_2036 NZ_JHDH01000118.1 Protein Homology CDS 12213 13199 . - 0 ID=cds-WP_032223421.1;Parent=gene-AB11_RS11600;Dbxref=GenBank:WP_032223421.1;Name=WP_032223421.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AB11_RS11600;product=D-cysteine desulfhydrase;protein_id=WP_032223421.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 13304 14104 . - . ID=gene-AB11_RS11605;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AB11_RS11605;old_locus_tag=AB11_2037 NZ_JHDH01000118.1 Protein Homology CDS 13304 14104 . - 0 ID=cds-WP_001295643.1;Parent=gene-AB11_RS11605;Dbxref=GenBank:WP_001295643.1;Name=WP_001295643.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AB11_RS11605;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001295643.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 14192 14743 . - . ID=gene-AB11_RS11610;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AB11_RS11610;old_locus_tag=AB11_2038 NZ_JHDH01000118.1 Protein Homology CDS 14192 14743 . - 0 ID=cds-WP_032223423.1;Parent=gene-AB11_RS11610;Dbxref=GenBank:WP_032223423.1;Name=WP_032223423.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AB11_RS11610;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_032223423.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 14789 15508 . - . ID=gene-AB11_RS11615;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AB11_RS11615;old_locus_tag=AB11_2039 NZ_JHDH01000118.1 Protein Homology CDS 14789 15508 . - 0 ID=cds-WP_001087467.1;Parent=gene-AB11_RS11615;Dbxref=GenBank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AB11_RS11615;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 15828 17090 . - . ID=gene-AB11_RS11620;Name=AB11_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11620;old_locus_tag=AB11_2041 NZ_JHDH01000118.1 Protein Homology CDS 15828 17090 . - 0 ID=cds-WP_000079740.1;Parent=gene-AB11_RS11620;Dbxref=GenBank:WP_000079740.1;Name=WP_000079740.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: protein motif:HMM:NF005294.0;locus_tag=AB11_RS11620;product=FliC/FljB family flagellin;protein_id=WP_000079740.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 17356 18762 . + . ID=gene-AB11_RS11625;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AB11_RS11625;old_locus_tag=AB11_2042 NZ_JHDH01000118.1 Protein Homology CDS 17356 18762 . + 0 ID=cds-WP_032223426.1;Parent=gene-AB11_RS11625;Dbxref=GenBank:WP_032223426.1;Name=WP_032223426.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AB11_RS11625;product=flagellar filament capping protein FliD;protein_id=WP_032223426.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 18787 19197 . + . ID=gene-AB11_RS11630;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AB11_RS11630;old_locus_tag=AB11_2043 NZ_JHDH01000118.1 Protein Homology CDS 18787 19197 . + 0 ID=cds-WP_000270664.1;Parent=gene-AB11_RS11630;Dbxref=GenBank:WP_000270664.1;Name=WP_000270664.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AB11_RS11630;product=flagellar export chaperone FliS;protein_id=WP_000270664.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 19197 19562 . + . ID=gene-AB11_RS11635;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AB11_RS11635;old_locus_tag=AB11_2044 NZ_JHDH01000118.1 Protein Homology CDS 19197 19562 . + 0 ID=cds-WP_001015024.1;Parent=gene-AB11_RS11635;Dbxref=GenBank:WP_001015024.1;Name=WP_001015024.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015018.1;locus_tag=AB11_RS11635;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015024.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 19640 21127 . + . ID=gene-AB11_RS11640;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AB11_RS11640;old_locus_tag=AB11_2045 NZ_JHDH01000118.1 Protein Homology CDS 19640 21127 . + 0 ID=cds-WP_016246061.1;Parent=gene-AB11_RS11640;Dbxref=GenBank:WP_016246061.1;Name=WP_016246061.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AB11_RS11640;product=alpha-amylase;protein_id=WP_016246061.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 21161 21574 . - . ID=gene-AB11_RS11645;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AB11_RS11645;old_locus_tag=AB11_2046 NZ_JHDH01000118.1 Protein Homology CDS 21161 21574 . - 0 ID=cds-WP_016246062.1;Parent=gene-AB11_RS11645;Dbxref=GenBank:WP_016246062.1;Name=WP_016246062.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AB11_RS11645;product=lipoprotein YedD;protein_id=WP_016246062.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 21761 22966 . + . ID=gene-AB11_RS11650;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AB11_RS11650;old_locus_tag=AB11_2047 NZ_JHDH01000118.1 Protein Homology CDS 21761 22966 . + 0 ID=cds-WP_021575185.1;Parent=gene-AB11_RS11650;Dbxref=GenBank:WP_021575185.1;Name=WP_021575185.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AB11_RS11650;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_021575185.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 22963 23196 . + . ID=gene-AB11_RS11655;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AB11_RS11655;old_locus_tag=AB11_2048 NZ_JHDH01000118.1 Protein Homology CDS 22963 23196 . + 0 ID=cds-WP_000790504.1;Parent=gene-AB11_RS11655;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AB11_RS11655;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_JHDH01000118.1 RefSeq gene 23303 23974 . + . ID=gene-AB11_RS11660;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AB11_RS11660;old_locus_tag=AB11_2049 NZ_JHDH01000118.1 Protein Homology CDS 23303 23974 . + 0 ID=cds-WP_000334618.1;Parent=gene-AB11_RS11660;Dbxref=GenBank:WP_000334618.1;Name=WP_000334618.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AB11_RS11660;product=SOS response-associated peptidase;protein_id=WP_000334618.1;transl_table=11 NZ_JHDH01000118.1 RefSeq pseudogene 24014 24856 . - . ID=gene-AB11_RS11665;Name=AB11_RS11665;end_range=24856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS11665;partial=true;pseudo=true NZ_JHDH01000118.1 Protein Homology CDS 24014 24856 . - 1 ID=cds-AB11_RS11665;Parent=gene-AB11_RS11665;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=24856,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AB11_RS11665;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000119.1 1 64483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000119.1 RefSeq region 1 64483 . + . ID=NZ_JHDH01000119.1:1..64483;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000119.1 RefSeq gene 1 355 . + . ID=gene-AB11_RS11670;Name=AB11_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11670;old_locus_tag=AB11_2052;partial=true;start_range=.,1 NZ_JHDH01000119.1 Protein Homology CDS 1 355 . + 1 ID=cds-WP_000463565.1;Parent=gene-AB11_RS11670;Dbxref=GenBank:WP_000463565.1;Name=WP_000463565.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS11670;partial=true;product=integrase core domain-containing protein;protein_id=WP_000463565.1;start_range=.,1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 371 922 . - . ID=gene-AB11_RS11675;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=AB11_RS11675 NZ_JHDH01000119.1 Protein Homology CDS 371 922 . - 0 ID=cds-WP_000734031.1;Parent=gene-AB11_RS11675;Dbxref=GenBank:WP_000734031.1;Name=WP_000734031.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=AB11_RS11675;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_000734031.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 1091 1423 . - . ID=gene-AB11_RS11680;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AB11_RS11680;old_locus_tag=AB11_2053 NZ_JHDH01000119.1 Protein Homology CDS 1091 1423 . - 0 ID=cds-WP_001070440.1;Parent=gene-AB11_RS11680;Dbxref=GenBank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=AB11_RS11680;product=multidrug efflux SMR transporter EmrE;protein_id=WP_001070440.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 1767 2081 . - . ID=gene-AB11_RS11685;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AB11_RS11685;old_locus_tag=AB11_2054 NZ_JHDH01000119.1 Protein Homology CDS 1767 2081 . - 0 ID=cds-WP_001301376.1;Parent=gene-AB11_RS11685;Dbxref=GenBank:WP_001301376.1;Name=WP_001301376.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AB11_RS11685;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001301376.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 2296 3954 . + . ID=gene-AB11_RS11690;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AB11_RS11690;old_locus_tag=AB11_2056 NZ_JHDH01000119.1 Protein Homology CDS 2296 3954 . + 0 ID=cds-WP_000994474.1;Parent=gene-AB11_RS11690;Dbxref=GenBank:WP_000994474.1;Name=WP_000994474.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416448.1;locus_tag=AB11_RS11690;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_000994474.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 3947 4942 . + . ID=gene-AB11_RS11695;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AB11_RS11695;old_locus_tag=AB11_2057 NZ_JHDH01000119.1 Protein Homology CDS 3947 4942 . + 0 ID=cds-WP_000067950.1;Parent=gene-AB11_RS11695;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AB11_RS11695;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 4935 5621 . + . ID=gene-AB11_RS11700;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AB11_RS11700;old_locus_tag=AB11_2058 NZ_JHDH01000119.1 Protein Homology CDS 4935 5621 . + 0 ID=cds-WP_001282694.1;Parent=gene-AB11_RS11700;Dbxref=GenBank:WP_001282694.1;Name=WP_001282694.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AB11_RS11700;product=flagellar assembly protein FliH;protein_id=WP_001282694.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 5621 6994 . + . ID=gene-AB11_RS11705;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AB11_RS11705;old_locus_tag=AB11_2059 NZ_JHDH01000119.1 Protein Homology CDS 5621 6994 . + 0 ID=cds-WP_000213294.1;Parent=gene-AB11_RS11705;Dbxref=GenBank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AB11_RS11705;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 7013 7456 . + . ID=gene-AB11_RS11710;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AB11_RS11710;old_locus_tag=AB11_2060 NZ_JHDH01000119.1 Protein Homology CDS 7013 7456 . + 0 ID=cds-WP_000807584.1;Parent=gene-AB11_RS11710;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AB11_RS11710;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 7453 8580 . + . ID=gene-AB11_RS11715;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AB11_RS11715;old_locus_tag=AB11_2061 NZ_JHDH01000119.1 Protein Homology CDS 7453 8580 . + 0 ID=cds-WP_000620107.1;Parent=gene-AB11_RS11715;Dbxref=GenBank:WP_000620107.1;Name=WP_000620107.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AB11_RS11715;product=flagellar hook-length control protein FliK;protein_id=WP_000620107.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 8685 9149 . + . ID=gene-AB11_RS11720;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AB11_RS11720;old_locus_tag=AB11_2062 NZ_JHDH01000119.1 Protein Homology CDS 8685 9149 . + 0 ID=cds-WP_000133106.1;Parent=gene-AB11_RS11720;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AB11_RS11720;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 9154 10158 . + . ID=gene-AB11_RS11725;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AB11_RS11725;old_locus_tag=AB11_2063 NZ_JHDH01000119.1 Protein Homology CDS 9154 10158 . + 0 ID=cds-WP_001295641.1;Parent=gene-AB11_RS11725;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AB11_RS11725;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 10155 10568 . + . ID=gene-AB11_RS11730;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AB11_RS11730;old_locus_tag=AB11_2064 NZ_JHDH01000119.1 Protein Homology CDS 10155 10568 . + 0 ID=cds-WP_001282098.1;Parent=gene-AB11_RS11730;Dbxref=GenBank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AB11_RS11730;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 10571 10936 . + . ID=gene-AB11_RS11735;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AB11_RS11735;old_locus_tag=AB11_2065 NZ_JHDH01000119.1 Protein Homology CDS 10571 10936 . + 0 ID=cds-WP_001325369.1;Parent=gene-AB11_RS11735;Dbxref=GenBank:WP_001325369.1;Name=WP_001325369.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AB11_RS11735;product=flagellar biosynthetic protein FliO;protein_id=WP_001325369.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 10936 11673 . + . ID=gene-AB11_RS11740;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AB11_RS11740;old_locus_tag=AB11_2066 NZ_JHDH01000119.1 Protein Homology CDS 10936 11673 . + 0 ID=cds-WP_001253441.1;Parent=gene-AB11_RS11740;Dbxref=GenBank:WP_001253441.1;Name=WP_001253441.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AB11_RS11740;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 11683 11952 . + . ID=gene-AB11_RS11745;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AB11_RS11745;old_locus_tag=AB11_2067 NZ_JHDH01000119.1 Protein Homology CDS 11683 11952 . + 0 ID=cds-WP_000187358.1;Parent=gene-AB11_RS11745;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AB11_RS11745;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 11961 12746 . + . ID=gene-AB11_RS11750;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AB11_RS11750;old_locus_tag=AB11_2068 NZ_JHDH01000119.1 Protein Homology CDS 11961 12746 . + 0 ID=cds-WP_000983977.1;Parent=gene-AB11_RS11750;Dbxref=GenBank:WP_000983977.1;Name=WP_000983977.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AB11_RS11750;product=flagellar biosynthetic protein FliR;protein_id=WP_000983977.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 13036 13659 . + . ID=gene-AB11_RS11755;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AB11_RS11755;old_locus_tag=AB11_2069 NZ_JHDH01000119.1 Protein Homology CDS 13036 13659 . + 0 ID=cds-WP_000103987.1;Parent=gene-AB11_RS11755;Dbxref=GenBank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AB11_RS11755;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 13703 13891 . - . ID=gene-AB11_RS11760;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AB11_RS11760;old_locus_tag=AB11_2070 NZ_JHDH01000119.1 Protein Homology CDS 13703 13891 . - 0 ID=cds-WP_000867217.1;Parent=gene-AB11_RS11760;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AB11_RS11760;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 14054 14281 . + . ID=gene-AB11_RS11765;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AB11_RS11765;old_locus_tag=AB11_2071 NZ_JHDH01000119.1 Protein Homology CDS 14054 14281 . + 0 ID=cds-WP_000844800.1;Parent=gene-AB11_RS11765;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AB11_RS11765;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 14579 15394 . + . ID=gene-AB11_RS11770;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AB11_RS11770;old_locus_tag=AB11_2072 NZ_JHDH01000119.1 Protein Homology CDS 14579 15394 . + 0 ID=cds-WP_000491472.1;Parent=gene-AB11_RS11770;Dbxref=GenBank:WP_000491472.1;Name=WP_000491472.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AB11_RS11770;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491472.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 15391 17085 . - . ID=gene-AB11_RS11775;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AB11_RS11775;old_locus_tag=AB11_2073 NZ_JHDH01000119.1 Protein Homology CDS 15391 17085 . - 0 ID=cds-WP_001354171.1;Parent=gene-AB11_RS11775;Dbxref=GenBank:WP_001354171.1;Name=WP_001354171.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AB11_RS11775;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001354171.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 17262 17444 . - . ID=gene-AB11_RS11780;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AB11_RS11780;old_locus_tag=AB11_2074 NZ_JHDH01000119.1 Protein Homology CDS 17262 17444 . - 0 ID=cds-WP_000009307.1;Parent=gene-AB11_RS11780;Dbxref=GenBank:WP_000009307.1;Name=WP_000009307.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AB11_RS11780;product=YodC family protein;protein_id=WP_000009307.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 17523 18440 . - . ID=gene-AB11_RS11785;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AB11_RS11785;old_locus_tag=AB11_2075 NZ_JHDH01000119.1 Protein Homology CDS 17523 18440 . - 0 ID=cds-WP_000922682.1;Parent=gene-AB11_RS11785;Dbxref=GenBank:WP_000922682.1;Name=WP_000922682.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AB11_RS11785;product=DUF808 domain-containing protein;protein_id=WP_000922682.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 18613 19533 . + . ID=gene-AB11_RS11790;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AB11_RS11790;old_locus_tag=AB11_2076 NZ_JHDH01000119.1 Protein Homology CDS 18613 19533 . + 0 ID=cds-WP_032223434.1;Parent=gene-AB11_RS11790;Dbxref=GenBank:WP_032223434.1;Name=WP_032223434.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AB11_RS11790;product=drug/metabolite exporter YedA;protein_id=WP_032223434.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 19522 19992 . - . ID=gene-AB11_RS11795;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AB11_RS11795;old_locus_tag=AB11_2077 NZ_JHDH01000119.1 Protein Homology CDS 19522 19992 . - 0 ID=cds-WP_001537202.1;Parent=gene-AB11_RS11795;Dbxref=GenBank:WP_001537202.1;Name=WP_001537202.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AB11_RS11795;product=VSPR family DNA mismatch endonuclease;protein_id=WP_001537202.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 19973 21391 . - . ID=gene-AB11_RS11800;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AB11_RS11800;old_locus_tag=AB11_2078 NZ_JHDH01000119.1 Protein Homology CDS 19973 21391 . - 0 ID=cds-WP_032223437.1;Parent=gene-AB11_RS11800;Dbxref=GenBank:WP_032223437.1;Name=WP_032223437.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AB11_RS11800;product=DNA-cytosine methyltransferase;protein_id=WP_032223437.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 21458 22153 . - . ID=gene-AB11_RS11805;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AB11_RS11805;old_locus_tag=AB11_2079 NZ_JHDH01000119.1 Protein Homology CDS 21458 22153 . - 0 ID=cds-WP_001551285.1;Parent=gene-AB11_RS11805;Dbxref=GenBank:WP_001551285.1;Name=WP_001551285.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AB11_RS11805;product=phosphohydrolase;protein_id=WP_001551285.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 22192 22473 . - . ID=gene-AB11_RS11810;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AB11_RS11810;old_locus_tag=AB11_2080 NZ_JHDH01000119.1 Protein Homology CDS 22192 22473 . - 0 ID=cds-WP_019842092.1;Parent=gene-AB11_RS11810;Dbxref=GenBank:WP_019842092.1;Name=WP_019842092.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AB11_RS11810;product=cell division protein DrpB;protein_id=WP_019842092.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 23123 24310 . + . ID=gene-AB11_RS11815;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AB11_RS11815;old_locus_tag=AB11_2081 NZ_JHDH01000119.1 Protein Homology CDS 23123 24310 . + 0 ID=cds-WP_000824408.1;Parent=gene-AB11_RS11815;Dbxref=GenBank:WP_000824408.1;Name=WP_000824408.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551287.1;locus_tag=AB11_RS11815;product=porin OmpC;protein_id=WP_000824408.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 24903 25754 . + . ID=gene-AB11_RS11820;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AB11_RS11820;old_locus_tag=AB11_2084 NZ_JHDH01000119.1 Protein Homology CDS 24903 25754 . + 0 ID=cds-WP_032223440.1;Parent=gene-AB11_RS11820;Dbxref=GenBank:WP_032223440.1;Name=WP_032223440.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AB11_RS11820;product=glyoxalase III HchA;protein_id=WP_032223440.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 25862 27220 . - . ID=gene-AB11_RS11825;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AB11_RS11825;old_locus_tag=AB11_2085 NZ_JHDH01000119.1 Protein Homology CDS 25862 27220 . - 0 ID=cds-WP_000826761.1;Parent=gene-AB11_RS11825;Dbxref=GenBank:WP_000826761.1;Name=WP_000826761.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310733.1;locus_tag=AB11_RS11825;product=two-component system sensor histidine kinase HprS;protein_id=WP_000826761.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 27220 27891 . - . ID=gene-AB11_RS11830;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AB11_RS11830;old_locus_tag=AB11_2086 NZ_JHDH01000119.1 Protein Homology CDS 27220 27891 . - 0 ID=cds-WP_001362894.1;Parent=gene-AB11_RS11830;Dbxref=GenBank:WP_001362894.1;Name=WP_001362894.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AB11_RS11830;product=response regulator transcription factor HprR;protein_id=WP_001362894.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 28024 28437 . + . ID=gene-AB11_RS11835;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AB11_RS11835;old_locus_tag=AB11_2087 NZ_JHDH01000119.1 Protein Homology CDS 28024 28437 . + 0 ID=cds-WP_000920132.1;Parent=gene-AB11_RS11835;Dbxref=GenBank:WP_000920132.1;Name=WP_000920132.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310735.1;locus_tag=AB11_RS11835;product=hydroxyisourate hydrolase;protein_id=WP_000920132.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 28546 29550 . + . ID=gene-AB11_RS11840;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AB11_RS11840;old_locus_tag=AB11_2088 NZ_JHDH01000119.1 Protein Homology CDS 28546 29550 . + 0 ID=cds-WP_000740085.1;Parent=gene-AB11_RS11840;Dbxref=GenBank:WP_000740085.1;Name=WP_000740085.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AB11_RS11840;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740085.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 29551 30186 . + . ID=gene-AB11_RS11845;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AB11_RS11845;old_locus_tag=AB11_2089 NZ_JHDH01000119.1 Protein Homology CDS 29551 30186 . + 0 ID=cds-WP_001240098.1;Parent=gene-AB11_RS11845;Dbxref=GenBank:WP_001240098.1;Name=WP_001240098.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707856.1;locus_tag=AB11_RS11845;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240098.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 30444 31094 . + . ID=gene-AB11_RS11850;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AB11_RS11850;old_locus_tag=AB11_2090 NZ_JHDH01000119.1 Protein Homology CDS 30444 31094 . + 0 ID=cds-WP_001007779.1;Parent=gene-AB11_RS11850;Dbxref=GenBank:WP_001007779.1;Name=WP_001007779.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707857.1;locus_tag=AB11_RS11850;product=metal-binding protein ZinT;protein_id=WP_001007779.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 31764 31853 . - . ID=gene-AB11_RS11855;Name=AB11_RS11855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11855;old_locus_tag=AB11_2091 NZ_JHDH01000119.1 tRNAscan-SE tRNA 31764 31853 . - . ID=rna-AB11_RS11855;Parent=gene-AB11_RS11855;anticodon=(pos:complement(31817..31819));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11855;product=tRNA-Ser NZ_JHDH01000119.1 tRNAscan-SE exon 31764 31853 . - . ID=exon-AB11_RS11855-1;Parent=rna-AB11_RS11855;anticodon=(pos:complement(31817..31819));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11855;product=tRNA-Ser NZ_JHDH01000119.1 RefSeq gene 31947 32744 . + . ID=gene-AB11_RS11860;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AB11_RS11860;old_locus_tag=AB11_2092 NZ_JHDH01000119.1 Protein Homology CDS 31947 32744 . + 0 ID=cds-WP_001325918.1;Parent=gene-AB11_RS11860;Dbxref=GenBank:WP_001325918.1;Name=WP_001325918.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AB11_RS11860;product=DgsA anti-repressor MtfA;protein_id=WP_001325918.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 32845 32920 . + . ID=gene-AB11_RS11865;Name=AB11_RS11865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11865;old_locus_tag=AB11_2093 NZ_JHDH01000119.1 tRNAscan-SE tRNA 32845 32920 . + . ID=rna-AB11_RS11865;Parent=gene-AB11_RS11865;anticodon=(pos:32878..32880);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11865;product=tRNA-Asn NZ_JHDH01000119.1 tRNAscan-SE exon 32845 32920 . + . ID=exon-AB11_RS11865-1;Parent=rna-AB11_RS11865;anticodon=(pos:32878..32880);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11865;product=tRNA-Asn NZ_JHDH01000119.1 RefSeq gene 33082 34344 . + . ID=gene-AB11_RS11870;Name=AB11_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11870;old_locus_tag=AB11_2094 NZ_JHDH01000119.1 Protein Homology CDS 33082 34344 . + 0 ID=cds-WP_032223443.1;Parent=gene-AB11_RS11870;Dbxref=GenBank:WP_032223443.1;Name=WP_032223443.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AB11_RS11870;product=tyrosine-type recombinase/integrase;protein_id=WP_032223443.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 34538 35842 . - . ID=gene-AB11_RS11875;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AB11_RS11875;old_locus_tag=AB11_2095 NZ_JHDH01000119.1 Protein Homology CDS 34538 35842 . - 0 ID=cds-WP_000703040.1;Parent=gene-AB11_RS11875;Dbxref=GenBank:WP_000703040.1;Name=WP_000703040.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AB11_RS11875;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703040.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 35870 37150 . - . ID=gene-AB11_RS11880;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AB11_RS11880;old_locus_tag=AB11_2096 NZ_JHDH01000119.1 Protein Homology CDS 35870 37150 . - 0 ID=cds-WP_001286286.1;Parent=gene-AB11_RS11880;Dbxref=GenBank:WP_001286286.1;Name=WP_001286286.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AB11_RS11880;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286286.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 37143 38945 . - . ID=gene-AB11_RS11885;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AB11_RS11885;old_locus_tag=AB11_2097 NZ_JHDH01000119.1 Protein Homology CDS 37143 38945 . - 0 ID=cds-WP_032223446.1;Parent=gene-AB11_RS11885;Dbxref=GenBank:WP_032223446.1;Name=WP_032223446.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AB11_RS11885;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_032223446.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 38932 40644 . - . ID=gene-AB11_RS11890;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AB11_RS11890;old_locus_tag=AB11_2098 NZ_JHDH01000119.1 Protein Homology CDS 38932 40644 . - 0 ID=cds-WP_001327954.1;Parent=gene-AB11_RS11890;Dbxref=GenBank:WP_001327954.1;Name=WP_001327954.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AB11_RS11890;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_001327954.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 40901 41860 . + . ID=gene-AB11_RS11895;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AB11_RS11895;old_locus_tag=AB11_2099 NZ_JHDH01000119.1 Protein Homology CDS 40901 41860 . + 0 ID=cds-WP_000140405.1;Parent=gene-AB11_RS11895;Dbxref=GenBank:WP_000140405.1;Name=WP_000140405.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AB11_RS11895;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140405.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 42051 48158 . + . ID=gene-AB11_RS11900;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AB11_RS11900;old_locus_tag=AB11_2100 NZ_JHDH01000119.1 Protein Homology CDS 42051 48158 . + 0 ID=cds-WP_000623033.1;Parent=gene-AB11_RS11900;Dbxref=GenBank:WP_000623033.1;Name=WP_000623033.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AB11_RS11900;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_000623033.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 48246 57737 . + . ID=gene-AB11_RS11905;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AB11_RS11905;old_locus_tag=AB11_2101 NZ_JHDH01000119.1 Protein Homology CDS 48246 57737 . + 0 ID=cds-WP_032223449.1;Parent=gene-AB11_RS11905;Dbxref=GenBank:WP_032223449.1;Name=WP_032223449.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AB11_RS11905;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_032223449.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 57734 58834 . + . ID=gene-AB11_RS11910;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AB11_RS11910;old_locus_tag=AB11_2102 NZ_JHDH01000119.1 Protein Homology CDS 57734 58834 . + 0 ID=cds-WP_000982873.1;Parent=gene-AB11_RS11910;Dbxref=GenBank:WP_000982873.1;Name=WP_000982873.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AB11_RS11910;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982873.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 58831 59634 . + . ID=gene-AB11_RS11915;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AB11_RS11915;old_locus_tag=AB11_2103 NZ_JHDH01000119.1 Protein Homology CDS 58831 59634 . + 0 ID=cds-WP_000194282.1;Parent=gene-AB11_RS11915;Dbxref=GenBank:WP_000194282.1;Name=WP_000194282.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AB11_RS11915;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194282.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 59638 61215 . + . ID=gene-AB11_RS11920;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AB11_RS11920;old_locus_tag=AB11_2104 NZ_JHDH01000119.1 Protein Homology CDS 59638 61215 . + 0 ID=cds-WP_001088826.1;Parent=gene-AB11_RS11920;Dbxref=GenBank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AB11_RS11920;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11 NZ_JHDH01000119.1 RefSeq gene 61346 63367 . + . ID=gene-AB11_RS11925;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AB11_RS11925;old_locus_tag=AB11_2105 NZ_JHDH01000119.1 Protein Homology CDS 61346 63367 . + 0 ID=cds-WP_032223451.1;Parent=gene-AB11_RS11925;Dbxref=GenBank:WP_032223451.1;Name=WP_032223451.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AB11_RS11925;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_032223451.1;transl_table=11 NZ_JHDH01000119.1 RefSeq pseudogene 63794 64483 . + . ID=gene-AB11_RS11930;Name=AB11_RS11930;end_range=64483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS11930;old_locus_tag=AB11_2107;partial=true;pseudo=true NZ_JHDH01000119.1 Protein Homology CDS 63794 64483 . + 0 ID=cds-AB11_RS11930;Parent=gene-AB11_RS11930;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=64483,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS11930;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000120.1 1 13856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000120.1 RefSeq region 1 13856 . + . ID=NZ_JHDH01000120.1:1..13856;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000120.1 RefSeq gene 1 668 . + . ID=gene-AB11_RS11935;Name=AB11_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11935;old_locus_tag=AB11_2109;partial=true;start_range=.,1 NZ_JHDH01000120.1 Protein Homology CDS 1 220 . + 0 ID=cds-WP_250855025.1;Parent=gene-AB11_RS11935;Dbxref=GenBank:WP_250855025.1;Name=WP_250855025.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AB11_RS11935;partial=true;product=IS1-like element IS1X2 family transposase;protein_id=WP_250855025.1;start_range=.,1;transl_table=11 NZ_JHDH01000120.1 Protein Homology CDS 220 668 . + 2 ID=cds-WP_250855025.1;Parent=gene-AB11_RS11935;Dbxref=GenBank:WP_250855025.1;Name=WP_250855025.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AB11_RS11935;partial=true;product=IS1-like element IS1X2 family transposase;protein_id=WP_250855025.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 1013 1723 . + . ID=gene-AB11_RS11940;Name=AB11_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11940 NZ_JHDH01000120.1 Protein Homology CDS 1013 1723 . + 0 ID=cds-WP_001323489.1;Parent=gene-AB11_RS11940;Dbxref=GenBank:WP_001323489.1;Name=WP_001323489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001429238.1;locus_tag=AB11_RS11940;product=inverse autotransporter beta domain-containing protein;protein_id=WP_001323489.1;transl_table=11 NZ_JHDH01000120.1 RefSeq pseudogene 1650 3755 . + . ID=gene-AB11_RS11945;Name=AB11_RS11945;end_range=3755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS11945;partial=true;pseudo=true;start_range=.,1650 NZ_JHDH01000120.1 Protein Homology CDS 1650 3755 . + 0 ID=cds-AB11_RS11945;Parent=gene-AB11_RS11945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010723107.1;locus_tag=AB11_RS11945;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,1650;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 3916 4968 . - . ID=gene-AB11_RS11950;Name=AB11_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11950;old_locus_tag=AB11_2114 NZ_JHDH01000120.1 Protein Homology CDS 3916 4968 . - 0 ID=cds-WP_000480498.1;Parent=gene-AB11_RS11950;Dbxref=GenBank:WP_000480498.1;Name=WP_000480498.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AB11_RS11950;product=glycosyltransferase family 9 protein;protein_id=WP_000480498.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 5283 6599 . + . ID=gene-AB11_RS11955;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AB11_RS11955;old_locus_tag=AB11_2115 NZ_JHDH01000120.1 Protein Homology CDS 5283 6599 . + 0 ID=cds-WP_000378584.1;Parent=gene-AB11_RS11955;Dbxref=GenBank:WP_000378584.1;Name=WP_000378584.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310805.1;locus_tag=AB11_RS11955;product=shikimate transporter;protein_id=WP_000378584.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 6701 8155 . + . ID=gene-AB11_RS11960;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AB11_RS11960;old_locus_tag=AB11_2116 NZ_JHDH01000120.1 Protein Homology CDS 6701 8155 . + 0 ID=cds-WP_001060244.1;Parent=gene-AB11_RS11960;Dbxref=GenBank:WP_001060244.1;Name=WP_001060244.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AB11_RS11960;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 8498 9214 . + . ID=gene-AB11_RS11965;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AB11_RS11965;old_locus_tag=AB11_2117 NZ_JHDH01000120.1 Protein Homology CDS 8498 9214 . + 0 ID=cds-WP_000532923.1;Parent=gene-AB11_RS11965;Dbxref=GenBank:WP_000532923.1;Name=WP_000532923.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=AB11_RS11965;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532923.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 9669 9744 . - . ID=gene-AB11_RS11970;Name=AB11_RS11970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11970;old_locus_tag=AB11_2118 NZ_JHDH01000120.1 tRNAscan-SE tRNA 9669 9744 . - . ID=rna-AB11_RS11970;Parent=gene-AB11_RS11970;anticodon=(pos:complement(9709..9711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11970;product=tRNA-Asn NZ_JHDH01000120.1 tRNAscan-SE exon 9669 9744 . - . ID=exon-AB11_RS11970-1;Parent=rna-AB11_RS11970;anticodon=(pos:complement(9709..9711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11970;product=tRNA-Asn NZ_JHDH01000120.1 RefSeq gene 9845 11332 . - . ID=gene-AB11_RS11975;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AB11_RS11975;old_locus_tag=AB11_2119 NZ_JHDH01000120.1 Protein Homology CDS 9845 11332 . - 0 ID=cds-WP_001323172.1;Parent=gene-AB11_RS11975;Dbxref=GenBank:WP_001323172.1;Name=WP_001323172.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AB11_RS11975;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_001323172.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 11493 11568 . + . ID=gene-AB11_RS11980;Name=AB11_RS11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS11980;old_locus_tag=AB11_2120 NZ_JHDH01000120.1 tRNAscan-SE tRNA 11493 11568 . + . ID=rna-AB11_RS11980;Parent=gene-AB11_RS11980;anticodon=(pos:11526..11528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11980;product=tRNA-Asn NZ_JHDH01000120.1 tRNAscan-SE exon 11493 11568 . + . ID=exon-AB11_RS11980-1;Parent=rna-AB11_RS11980;anticodon=(pos:11526..11528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS11980;product=tRNA-Asn NZ_JHDH01000120.1 RefSeq gene 11606 12556 . - . ID=gene-AB11_RS11985;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AB11_RS11985;old_locus_tag=AB11_2121 NZ_JHDH01000120.1 Protein Homology CDS 11606 12556 . - 0 ID=cds-WP_001011013.1;Parent=gene-AB11_RS11985;Dbxref=GenBank:WP_001011013.1;Name=WP_001011013.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310810.1;locus_tag=AB11_RS11985;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011013.1;transl_table=11 NZ_JHDH01000120.1 RefSeq gene 12730 13710 . + . ID=gene-AB11_RS11990;Name=AB11_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11990;old_locus_tag=AB11_2122 NZ_JHDH01000120.1 Protein Homology CDS 12730 13710 . + 0 ID=cds-WP_000019440.1-4;Parent=gene-AB11_RS11990;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS11990;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 ##sequence-region NZ_JHDH01000121.1 1 8032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000121.1 RefSeq region 1 8032 . + . ID=NZ_JHDH01000121.1:1..8032;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000121.1 RefSeq gene 1 958 . + . ID=gene-AB11_RS11995;Name=AB11_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS11995;old_locus_tag=AB11_2123;partial=true;start_range=.,1 NZ_JHDH01000121.1 Protein Homology CDS 1 958 . + 1 ID=cds-WP_032222538.1-3;Parent=gene-AB11_RS11995;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS11995;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;start_range=.,1;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 1105 2022 . - . ID=gene-AB11_RS12000;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AB11_RS12000;old_locus_tag=AB11_2124 NZ_JHDH01000121.1 Protein Homology CDS 1105 2022 . - 0 ID=cds-WP_001011483.1;Parent=gene-AB11_RS12000;Dbxref=GenBank:WP_001011483.1;Name=WP_001011483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AB11_RS12000;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011483.1;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 2348 2423 . + . ID=gene-AB11_RS12005;Name=AB11_RS12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS12005;old_locus_tag=AB11_2126 NZ_JHDH01000121.1 tRNAscan-SE tRNA 2348 2423 . + . ID=rna-AB11_RS12005;Parent=gene-AB11_RS12005;anticodon=(pos:2381..2383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS12005;product=tRNA-Asn NZ_JHDH01000121.1 tRNAscan-SE exon 2348 2423 . + . ID=exon-AB11_RS12005-1;Parent=rna-AB11_RS12005;anticodon=(pos:2381..2383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS12005;product=tRNA-Asn NZ_JHDH01000121.1 RefSeq gene 2479 3414 . - . ID=gene-AB11_RS12010;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AB11_RS12010;old_locus_tag=AB11_2127 NZ_JHDH01000121.1 Protein Homology CDS 2479 3414 . - 0 ID=cds-WP_000986331.1;Parent=gene-AB11_RS12010;Dbxref=GenBank:WP_000986331.1;Name=WP_000986331.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310812.2;locus_tag=AB11_RS12010;product=L%2CD-transpeptidase;protein_id=WP_000986331.1;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 3476 4555 . - . ID=gene-AB11_RS12015;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AB11_RS12015;old_locus_tag=AB11_2128 NZ_JHDH01000121.1 Protein Homology CDS 3476 4555 . - 0 ID=cds-WP_001193786.1;Parent=gene-AB11_RS12015;Dbxref=GenBank:WP_001193786.1;Name=WP_001193786.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AB11_RS12015;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193786.1;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 4567 5310 . - . ID=gene-AB11_RS12020;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AB11_RS12020;old_locus_tag=AB11_2129 NZ_JHDH01000121.1 Protein Homology CDS 4567 5310 . - 0 ID=cds-WP_001325603.1;Parent=gene-AB11_RS12020;Dbxref=GenBank:WP_001325603.1;Name=WP_001325603.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AB11_RS12020;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001325603.1;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 5307 5852 . - . ID=gene-AB11_RS12025;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AB11_RS12025;old_locus_tag=AB11_2130 NZ_JHDH01000121.1 Protein Homology CDS 5307 5852 . - 0 ID=cds-WP_032223462.1;Parent=gene-AB11_RS12025;Dbxref=GenBank:WP_032223462.1;Name=WP_032223462.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AB11_RS12025;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_032223462.1;transl_table=11 NZ_JHDH01000121.1 RefSeq pseudogene 6004 6147 . - . ID=gene-AB11_RS25560;Name=AB11_RS25560;end_range=6147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25560;old_locus_tag=AB11_2131;partial=true;pseudo=true NZ_JHDH01000121.1 Protein Homology CDS 6004 6147 . - 0 ID=cds-AB11_RS25560;Parent=gene-AB11_RS25560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6147,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AB11_RS25560;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JHDH01000121.1 RefSeq pseudogene 6156 6344 . - . ID=gene-AB11_RS25565;Name=AB11_RS25565;end_range=6344,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25565;partial=true;pseudo=true;start_range=.,6156 NZ_JHDH01000121.1 Protein Homology CDS 6156 6344 . - 0 ID=cds-AB11_RS25565;Parent=gene-AB11_RS25565;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AB11_RS25565;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,6156;transl_table=11 NZ_JHDH01000121.1 RefSeq gene 6317 6481 . - . ID=gene-AB11_RS25220;Name=AB11_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25220;old_locus_tag=AB11_2132 NZ_JHDH01000121.1 GeneMarkS-2+ CDS 6317 6481 . - 0 ID=cds-WP_001128468.1;Parent=gene-AB11_RS25220;Dbxref=GenBank:WP_001128468.1;Name=WP_001128468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25220;product=hypothetical protein;protein_id=WP_001128468.1;transl_table=11 NZ_JHDH01000121.1 RefSeq pseudogene 7341 8032 . - . ID=gene-AB11_RS12030;Name=AB11_RS12030;end_range=8032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12030;old_locus_tag=AB11_2133;partial=true;pseudo=true NZ_JHDH01000121.1 Protein Homology CDS 7341 8032 . - 2 ID=cds-AB11_RS12030;Parent=gene-AB11_RS12030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=8032,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS12030;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000122.1 1 33032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000122.1 RefSeq region 1 33032 . + . ID=NZ_JHDH01000122.1:1..33032;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000122.1 RefSeq gene 1 319 . - . ID=gene-AB11_RS12035;Name=AB11_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12035;old_locus_tag=AB11_2134;partial=true;start_range=.,1 NZ_JHDH01000122.1 Protein Homology CDS 1 319 . - 0 ID=cds-WP_000567747.1;Parent=gene-AB11_RS12035;Dbxref=GenBank:WP_000567747.1;Name=WP_000567747.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS12035;partial=true;product=transposase;protein_id=WP_000567747.1;start_range=.,1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 412 534 . + . ID=gene-AB11_RS25570;Name=AB11_RS25570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25570;partial=true;pseudo=true;start_range=.,412 NZ_JHDH01000122.1 Protein Homology CDS 412 534 . + 0 ID=cds-AB11_RS25570;Parent=gene-AB11_RS25570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309391.1;locus_tag=AB11_RS25570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,412;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 829 1193 . + . ID=gene-AB11_RS26065;Name=AB11_RS26065;end_range=1193,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26065;partial=true;pseudo=true;start_range=.,829 NZ_JHDH01000122.1 Protein Homology CDS 829 1193 . + 0 ID=cds-AB11_RS26065;Parent=gene-AB11_RS26065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=1193,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=AB11_RS26065;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,829;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 1315 1651 . - . ID=gene-AB11_RS12040;Name=AB11_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12040;pseudo=true NZ_JHDH01000122.1 Protein Homology CDS 1315 1651 . - 0 ID=cds-AB11_RS12040;Parent=gene-AB11_RS12040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502602.1;locus_tag=AB11_RS12040;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 2292 2510 . - . ID=gene-AB11_RS12045;Name=AB11_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12045;old_locus_tag=AB11_2137 NZ_JHDH01000122.1 Protein Homology CDS 2292 2510 . - 0 ID=cds-WP_032198272.1;Parent=gene-AB11_RS12045;Dbxref=GenBank:WP_032198272.1;Name=WP_032198272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309389.2;locus_tag=AB11_RS12045;product=hypothetical protein;protein_id=WP_032198272.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 3842 4024 . - . ID=gene-AB11_RS25775;Name=AB11_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25775 NZ_JHDH01000122.1 Protein Homology CDS 3842 4024 . - 0 ID=cds-WP_000922606.1;Parent=gene-AB11_RS25775;Dbxref=GenBank:WP_000922606.1;Name=WP_000922606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922600.1;locus_tag=AB11_RS25775;product=hypothetical protein;protein_id=WP_000922606.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 3963 6053 . + . ID=gene-AB11_RS12050;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AB11_RS12050;old_locus_tag=AB11_2139 NZ_JHDH01000122.1 Protein Homology CDS 3963 6053 . + 0 ID=cds-WP_001223352.1;Parent=gene-AB11_RS12050;Dbxref=GenBank:WP_001223352.1;Name=WP_001223352.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AB11_RS12050;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_001223352.1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 6271 6421 . - . ID=gene-AB11_RS12055;Name=AB11_RS12055;end_range=6421,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12055;partial=true;pseudo=true NZ_JHDH01000122.1 Protein Homology CDS 6271 6421 . - 0 ID=cds-AB11_RS12055;Parent=gene-AB11_RS12055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=AB11_RS12055;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 6915 7157 . + . ID=gene-AB11_RS12060;Name=AB11_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12060;old_locus_tag=AB11_2140 NZ_JHDH01000122.1 Protein Homology CDS 6915 7157 . + 0 ID=cds-WP_001363144.1;Parent=gene-AB11_RS12060;Dbxref=GenBank:WP_001363144.1;Name=WP_001363144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244175.1;locus_tag=AB11_RS12060;product=hypothetical protein;protein_id=WP_001363144.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 7245 7436 . + . ID=gene-AB11_RS25225;Name=AB11_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25225 NZ_JHDH01000122.1 Protein Homology CDS 7245 7436 . + 0 ID=cds-WP_001322947.1;Parent=gene-AB11_RS25225;Dbxref=GenBank:WP_001322947.1;Name=WP_001322947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322947.1;locus_tag=AB11_RS25225;product=hypothetical protein;protein_id=WP_001322947.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 7448 7816 . + . ID=gene-AB11_RS12065;Name=AB11_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12065;old_locus_tag=AB11_2141 NZ_JHDH01000122.1 Protein Homology CDS 7448 7816 . + 0 ID=cds-WP_001443103.1;Parent=gene-AB11_RS12065;Dbxref=GenBank:WP_001443103.1;Name=WP_001443103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001456887.1;locus_tag=AB11_RS12065;product=hypothetical protein;protein_id=WP_001443103.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 7820 8035 . + . ID=gene-AB11_RS12070;Name=AB11_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12070;old_locus_tag=AB11_2142 NZ_JHDH01000122.1 Protein Homology CDS 7820 8035 . + 0 ID=cds-WP_032198417.1;Parent=gene-AB11_RS12070;Dbxref=GenBank:WP_032198417.1;Name=WP_032198417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622039.1;locus_tag=AB11_RS12070;product=hypothetical protein;protein_id=WP_032198417.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 8032 8304 . + . ID=gene-AB11_RS25780;Name=AB11_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25780 NZ_JHDH01000122.1 Protein Homology CDS 8032 8304 . + 0 ID=cds-WP_001309731.1;Parent=gene-AB11_RS25780;Dbxref=GenBank:WP_001309731.1;Name=WP_001309731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309731.1;locus_tag=AB11_RS25780;product=hypothetical protein;protein_id=WP_001309731.1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 8613 9444 . - . ID=gene-AB11_RS12075;Name=AB11_RS12075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12075;partial=true;pseudo=true;start_range=.,8613 NZ_JHDH01000122.1 Protein Homology CDS 8613 9444 . - 0 ID=cds-AB11_RS12075;Parent=gene-AB11_RS12075;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555401.1;locus_tag=AB11_RS12075;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,8613;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 9502 9690 . + . ID=gene-AB11_RS12080;Name=AB11_RS12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12080;old_locus_tag=AB11_2146;partial=true;pseudo=true;start_range=.,9502 NZ_JHDH01000122.1 Protein Homology CDS 9502 9690 . + 0 ID=cds-AB11_RS12080;Parent=gene-AB11_RS12080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AB11_RS12080;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,9502;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 10140 10292 . - . ID=gene-AB11_RS12085;Name=AB11_RS12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12085;old_locus_tag=AB11_2147;partial=true;pseudo=true;start_range=.,10140 NZ_JHDH01000122.1 Protein Homology CDS 10140 10292 . - 0 ID=cds-AB11_RS12085;Parent=gene-AB11_RS12085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415759.1;locus_tag=AB11_RS12085;partial=true;product=peptide ABC transporter substrate-binding protein;pseudo=true;start_range=.,10140;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 10629 12185 . + . ID=gene-AB11_RS12090;Name=AB11_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12090;old_locus_tag=AB11_2148 NZ_JHDH01000122.1 Protein Homology CDS 10629 12185 . + 0 ID=cds-WP_000544017.1;Parent=gene-AB11_RS12090;Dbxref=GenBank:WP_000544017.1;Name=WP_000544017.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544017.1;locus_tag=AB11_RS12090;product=L-lactate permease;protein_id=WP_000544017.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 12235 12954 . + . ID=gene-AB11_RS12095;Name=AB11_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12095;old_locus_tag=AB11_2149 NZ_JHDH01000122.1 Protein Homology CDS 12235 12954 . + 0 ID=cds-WP_001102090.1;Parent=gene-AB11_RS12095;Dbxref=GenBank:WP_001102090.1;Name=WP_001102090.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706213.1;locus_tag=AB11_RS12095;product=(Fe-S)-binding protein;protein_id=WP_001102090.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 12965 14380 . + . ID=gene-AB11_RS12100;Name=AB11_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12100;old_locus_tag=AB11_2150 NZ_JHDH01000122.1 Protein Homology CDS 12965 14380 . + 0 ID=cds-WP_021528407.1;Parent=gene-AB11_RS12100;Dbxref=GenBank:WP_021528407.1;Name=WP_021528407.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544484.1;locus_tag=AB11_RS12100;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_021528407.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 14385 15083 . + . ID=gene-AB11_RS12105;Name=AB11_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12105;old_locus_tag=AB11_2151 NZ_JHDH01000122.1 Protein Homology CDS 14385 15083 . + 0 ID=cds-WP_000431498.1;Parent=gene-AB11_RS12105;Dbxref=GenBank:WP_000431498.1;Name=WP_000431498.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431498.1;locus_tag=AB11_RS12105;product=LutC/YkgG family protein;protein_id=WP_000431498.1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 15492 15740 . - . ID=gene-AB11_RS12110;Name=AB11_RS12110;end_range=15740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12110;old_locus_tag=AB11_2153;partial=true;pseudo=true NZ_JHDH01000122.1 Protein Homology CDS 15492 15740 . - 0 ID=cds-AB11_RS12110;Parent=gene-AB11_RS12110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058881.1;locus_tag=AB11_RS12110;partial=true;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 15888 16268 . + . ID=gene-AB11_RS12115;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB11_RS12115 NZ_JHDH01000122.1 Protein Homology CDS 15888 16268 . + 0 ID=cds-WP_001171554.1;Parent=gene-AB11_RS12115;Dbxref=GenBank:WP_001171554.1;Name=WP_001171554.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AB11_RS12115;product=IS66-like element accessory protein TnpA;protein_id=WP_001171554.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 16265 16573 . + . ID=gene-AB11_RS12120;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB11_RS12120;old_locus_tag=AB11_2154 NZ_JHDH01000122.1 Protein Homology CDS 16265 16573 . + 0 ID=cds-WP_032199315.1;Parent=gene-AB11_RS12120;Dbxref=GenBank:WP_032199315.1;Name=WP_032199315.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AB11_RS12120;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032199315.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 16640 17662 . + . ID=gene-AB11_RS12125;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AB11_RS12125;old_locus_tag=AB11_2155 NZ_JHDH01000122.1 Protein Homology CDS 16640 17662 . + 0 ID=cds-WP_000255944.1;Parent=gene-AB11_RS12125;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB11_RS12125;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 17659 18441 . + . ID=gene-AB11_RS12130;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AB11_RS12130;old_locus_tag=AB11_2156 NZ_JHDH01000122.1 Protein Homology CDS 17659 18441 . + 0 ID=cds-WP_077699293.1;Parent=gene-AB11_RS12130;Dbxref=GenBank:WP_077699293.1;Name=WP_077699293.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB11_RS12130;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_077699293.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 18621 20159 . + . ID=gene-AB11_RS12135;Name=AB11_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12135;old_locus_tag=AB11_2157 NZ_JHDH01000122.1 Protein Homology CDS 18621 20159 . + 0 ID=cds-WP_032223475.1;Parent=gene-AB11_RS12135;Dbxref=GenBank:WP_032223475.1;Name=WP_032223475.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB11_RS12135;product=IS66-like element ISEc8 family transposase;protein_id=WP_032223475.1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 20153 20865 . - . ID=gene-AB11_RS12140;Name=AB11_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12140;partial=true;pseudo=true;start_range=.,20153 NZ_JHDH01000122.1 Protein Homology CDS 20153 20865 . - 0 ID=cds-AB11_RS12140;Parent=gene-AB11_RS12140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001615471.1;locus_tag=AB11_RS12140;partial=true;product=outer membrane protein;pseudo=true;start_range=.,20153;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 21169 21725 . - . ID=gene-AB11_RS12145;Name=AB11_RS12145;end_range=21725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12145;partial=true;pseudo=true NZ_JHDH01000122.1 Protein Homology CDS 21169 21725 . - 0 ID=cds-AB11_RS12145;Parent=gene-AB11_RS12145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=21725,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS12145;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 21736 22512 . - . ID=gene-AB11_RS12150;Name=AB11_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12150;old_locus_tag=AB11_2161 NZ_JHDH01000122.1 Protein Homology CDS 21736 22512 . - 0 ID=cds-WP_071996230.1;Parent=gene-AB11_RS12150;Dbxref=GenBank:WP_071996230.1;Name=WP_071996230.1;Ontology_term=GO:0071918,GO:0015204,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transmembrane transport|0071918||IEA;inference=COORDINATES: protein motif:HMM:NF015226.6;locus_tag=AB11_RS12150;product=urea transporter;protein_id=WP_071996230.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 22954 24390 . - . ID=gene-AB11_RS12155;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AB11_RS12155;old_locus_tag=AB11_2163 NZ_JHDH01000122.1 Protein Homology CDS 22954 24390 . - 0 ID=cds-WP_001682677.1;Parent=gene-AB11_RS12155;Dbxref=GenBank:WP_001682677.1;Name=WP_001682677.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000860465.1;locus_tag=AB11_RS12155;product=alpha-hemolysin T1SS ABC transporter subunit HlyD;protein_id=WP_001682677.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 24409 26532 . - . ID=gene-AB11_RS12160;Name=AB11_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12160;old_locus_tag=AB11_2164 NZ_JHDH01000122.1 Protein Homology CDS 24409 26532 . - 0 ID=cds-WP_016234203.1;Parent=gene-AB11_RS12160;Dbxref=GenBank:WP_016234203.1;Name=WP_016234203.1;Ontology_term=GO:0030253,GO:0005524,GO:0016020,GO:0030256;gbkey=CDS;go_component=membrane|0016020||IEA,type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_063101322.1;locus_tag=AB11_RS12160;product=type I secretion system permease/ATPase;protein_id=WP_016234203.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 26603 29677 . - . ID=gene-AB11_RS12165;Name=hlyA;gbkey=Gene;gene=hlyA;gene_biotype=protein_coding;locus_tag=AB11_RS12165;old_locus_tag=AB11_2165 NZ_JHDH01000122.1 Protein Homology CDS 26603 29677 . - 0 ID=cds-WP_032223478.1;Parent=gene-AB11_RS12165;Dbxref=GenBank:WP_032223478.1;Name=WP_032223478.1;gbkey=CDS;gene=hlyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142368.1;locus_tag=AB11_RS12165;product=RTX toxin hemolysin HlyA;protein_id=WP_032223478.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 29689 30201 . - . ID=gene-AB11_RS12170;Name=hlyC;gbkey=Gene;gene=hlyC;gene_biotype=protein_coding;locus_tag=AB11_RS12170;old_locus_tag=AB11_2166 NZ_JHDH01000122.1 Protein Homology CDS 29689 30201 . - 0 ID=cds-WP_021528397.1;Parent=gene-AB11_RS12170;Dbxref=GenBank:WP_021528397.1;Name=WP_021528397.1;gbkey=CDS;gene=hlyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535080.1;locus_tag=AB11_RS12170;product=alpha-hemolysin-activating lysine-acyltransferase HlyC;protein_id=WP_021528397.1;transl_table=11 NZ_JHDH01000122.1 RefSeq gene 30471 30692 . + . ID=gene-AB11_RS25230;Name=AB11_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25230;old_locus_tag=AB11_2167 NZ_JHDH01000122.1 Protein Homology CDS 30471 30692 . + 0 ID=cds-WP_071996231.1;Parent=gene-AB11_RS25230;Dbxref=GenBank:WP_071996231.1;Name=WP_071996231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234200.1;locus_tag=AB11_RS25230;product=hypothetical protein;protein_id=WP_071996231.1;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 31108 32421 . + . ID=gene-AB11_RS12175;Name=AB11_RS12175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12175;old_locus_tag=AB11_2168;partial=true;pseudo=true;start_range=.,31108 NZ_JHDH01000122.1 Protein Homology CDS 31108 32421 . + 0 ID=cds-AB11_RS12175;Parent=gene-AB11_RS12175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AB11_RS12175;partial=true;product=IS66-like element ISEc43 family transposase;pseudo=true;start_range=.,31108;transl_table=11 NZ_JHDH01000122.1 RefSeq pseudogene 32577 33032 . + . ID=gene-AB11_RS12180;Name=AB11_RS12180;end_range=33032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12180;old_locus_tag=AB11_2169;partial=true;pseudo=true NZ_JHDH01000122.1 Protein Homology CDS 32577 33032 . + 0 ID=cds-AB11_RS12180;Parent=gene-AB11_RS12180;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=33032,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AB11_RS12180;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000123.1 1 11112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000123.1 RefSeq region 1 11112 . + . ID=NZ_JHDH01000123.1:1..11112;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000123.1 RefSeq pseudogene 1 126 . - . ID=gene-AB11_RS12185;Name=AB11_RS12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12185;old_locus_tag=AB11_2170;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000123.1 Protein Homology CDS 1 126 . - 0 ID=cds-AB11_RS12185;Parent=gene-AB11_RS12185;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS12185;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000123.1 RefSeq pseudogene 192 1043 . + . ID=gene-AB11_RS12190;Name=AB11_RS12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12190;old_locus_tag=AB11_2171;partial=true;pseudo=true;start_range=.,192 NZ_JHDH01000123.1 Protein Homology CDS 192 1043 . + 0 ID=cds-AB11_RS12190;Parent=gene-AB11_RS12190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=AB11_RS12190;partial=true;product=phosphotriesterase-related protein;pseudo=true;start_range=.,192;transl_table=11 NZ_JHDH01000123.1 RefSeq pseudogene 1083 1375 . - . ID=gene-AB11_RS12195;Name=AB11_RS12195;end_range=1375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12195;partial=true;pseudo=true NZ_JHDH01000123.1 Protein Homology CDS 1083 1375 . - 0 ID=cds-AB11_RS12195;Parent=gene-AB11_RS12195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709217.2;locus_tag=AB11_RS12195;partial=true;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_JHDH01000123.1 RefSeq pseudogene 1455 3074 . - . ID=gene-AB11_RS12200;Name=AB11_RS12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12200;pseudo=true NZ_JHDH01000123.1 Protein Homology CDS 1455 3074 . - 0 ID=cds-AB11_RS12200;Parent=gene-AB11_RS12200;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AB11_RS12200;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000123.1 RefSeq pseudogene 3358 3767 . - . ID=gene-AB11_RS12205;Name=AB11_RS12205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12205;pseudo=true NZ_JHDH01000123.1 Protein Homology CDS 3358 3767 . - 0 ID=cds-AB11_RS12205;Parent=gene-AB11_RS12205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238421.1;locus_tag=AB11_RS12205;product=zinc-ribbon domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 3755 4156 . - . ID=gene-AB11_RS12210;Name=AB11_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12210 NZ_JHDH01000123.1 Protein Homology CDS 3755 4156 . - 0 ID=cds-WP_001620683.1;Parent=gene-AB11_RS12210;Dbxref=GenBank:WP_001620683.1;Name=WP_001620683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020115.1;locus_tag=AB11_RS12210;product=putative zinc ribbon protein;protein_id=WP_001620683.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 4416 4985 . - . ID=gene-AB11_RS12215;Name=AB11_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12215;old_locus_tag=AB11_2177 NZ_JHDH01000123.1 Protein Homology CDS 4416 4985 . - 0 ID=cds-WP_000221530.1;Parent=gene-AB11_RS12215;Dbxref=GenBank:WP_000221530.1;Name=WP_000221530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB11_RS12215;product=inovirus Gp2 family protein;protein_id=WP_000221530.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 5184 5384 . + . ID=gene-AB11_RS25575;Name=AB11_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25575 NZ_JHDH01000123.1 Protein Homology CDS 5184 5384 . + 0 ID=cds-WP_001336481.1;Parent=gene-AB11_RS25575;Dbxref=GenBank:WP_001336481.1;Name=WP_001336481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297900.1;locus_tag=AB11_RS25575;product=hypothetical protein;protein_id=WP_001336481.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 5799 5948 . - . ID=gene-AB11_RS12220;Name=AB11_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12220;old_locus_tag=AB11_2178 NZ_JHDH01000123.1 Protein Homology CDS 5799 5948 . - 0 ID=cds-WP_052318419.1;Parent=gene-AB11_RS12220;Dbxref=GenBank:WP_052318419.1;Name=WP_052318419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453334.1;locus_tag=AB11_RS12220;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_052318419.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 6707 6913 . + . ID=gene-AB11_RS12225;Name=AB11_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12225;old_locus_tag=AB11_2180 NZ_JHDH01000123.1 Protein Homology CDS 6707 6913 . + 0 ID=cds-WP_000957424.1;Parent=gene-AB11_RS12225;Dbxref=GenBank:WP_000957424.1;Name=WP_000957424.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AB11_RS12225;product=helix-turn-helix transcriptional regulator;protein_id=WP_000957424.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 7000 7602 . + . ID=gene-AB11_RS12230;Name=AB11_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12230;old_locus_tag=AB11_2181 NZ_JHDH01000123.1 Protein Homology CDS 7000 7602 . + 0 ID=cds-WP_000804452.1-3;Parent=gene-AB11_RS12230;Dbxref=GenBank:WP_000804452.1;Name=WP_000804452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590672.1;locus_tag=AB11_RS12230;product=hypothetical protein;protein_id=WP_000804452.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 7924 9408 . - . ID=gene-AB11_RS12235;Name=AB11_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12235;old_locus_tag=AB11_2182 NZ_JHDH01000123.1 Protein Homology CDS 7924 9408 . - 0 ID=cds-WP_001297234.1-3;Parent=gene-AB11_RS12235;Dbxref=GenBank:WP_001297234.1;Name=WP_001297234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=AB11_RS12235;product=YfjI family protein;protein_id=WP_001297234.1;transl_table=11 NZ_JHDH01000123.1 RefSeq gene 10639 11112 . + . ID=gene-AB11_RS12240;Name=AB11_RS12240;end_range=11112,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12240;old_locus_tag=AB11_2185;partial=true NZ_JHDH01000123.1 Protein Homology CDS 10639 11112 . + 0 ID=cds-WP_032222962.1-2;Parent=gene-AB11_RS12240;Dbxref=GenBank:WP_032222962.1;Name=WP_032222962.1;Ontology_term=GO:0005525;end_range=11112,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB11_RS12240;partial=true;product=YfjP family GTPase;protein_id=WP_032222962.1;transl_table=11 ##sequence-region NZ_JHDH01000124.1 1 3734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000124.1 RefSeq region 1 3734 . + . ID=NZ_JHDH01000124.1:1..3734;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000124.1 RefSeq gene 1 225 . - . ID=gene-AB11_RS12245;Name=AB11_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12245;partial=true;start_range=.,1 NZ_JHDH01000124.1 Protein Homology CDS 1 225 . - 0 ID=cds-WP_204362280.1-2;Parent=gene-AB11_RS12245;Dbxref=GenBank:WP_204362280.1;Name=WP_204362280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135553.1;locus_tag=AB11_RS12245;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_204362280.1;start_range=.,1;transl_table=11 NZ_JHDH01000124.1 RefSeq pseudogene 300 407 . - . ID=gene-AB11_RS26240;Name=AB11_RS26240;end_range=407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26240;partial=true;pseudo=true NZ_JHDH01000124.1 Protein Homology CDS 300 407 . - 0 ID=cds-AB11_RS26240;Parent=gene-AB11_RS26240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AB11_RS26240;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000124.1 RefSeq pseudogene 412 501 . + . ID=gene-AB11_RS25580;Name=AB11_RS25580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25580;partial=true;pseudo=true;start_range=.,412 NZ_JHDH01000124.1 Protein Homology CDS 412 501 . + 0 ID=cds-AB11_RS25580;Parent=gene-AB11_RS25580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708754.1;locus_tag=AB11_RS25580;partial=true;product=putative zinc ribbon protein;pseudo=true;start_range=.,412;transl_table=11 NZ_JHDH01000124.1 RefSeq pseudogene 793 981 . - . ID=gene-AB11_RS12260;Name=AB11_RS12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12260;old_locus_tag=AB11_2187;partial=true;pseudo=true;start_range=.,793 NZ_JHDH01000124.1 Protein Homology CDS 793 981 . - 0 ID=cds-AB11_RS12260;Parent=gene-AB11_RS12260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013305.1;locus_tag=AB11_RS12260;partial=true;product=DUF7828 domain-containing protein;pseudo=true;start_range=.,793;transl_table=11 NZ_JHDH01000124.1 RefSeq gene 978 1361 . - . ID=gene-AB11_RS12265;Name=AB11_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12265;old_locus_tag=AB11_2188 NZ_JHDH01000124.1 Protein Homology CDS 978 1361 . - 0 ID=cds-WP_000271020.1;Parent=gene-AB11_RS12265;Dbxref=GenBank:WP_000271020.1;Name=WP_000271020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270954.1;locus_tag=AB11_RS12265;product=putative zinc ribbon protein;protein_id=WP_000271020.1;transl_table=11 NZ_JHDH01000124.1 RefSeq gene 1527 2096 . - . ID=gene-AB11_RS12270;Name=AB11_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12270;old_locus_tag=AB11_2189 NZ_JHDH01000124.1 Protein Homology CDS 1527 2096 . - 0 ID=cds-WP_000148641.1;Parent=gene-AB11_RS12270;Dbxref=GenBank:WP_000148641.1;Name=WP_000148641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB11_RS12270;product=inovirus Gp2 family protein;protein_id=WP_000148641.1;transl_table=11 NZ_JHDH01000124.1 RefSeq gene 2300 2497 . + . ID=gene-AB11_RS25585;Name=AB11_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25585 NZ_JHDH01000124.1 Protein Homology CDS 2300 2497 . + 0 ID=cds-WP_001390336.1;Parent=gene-AB11_RS25585;Dbxref=GenBank:WP_001390336.1;Name=WP_001390336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236763.1;locus_tag=AB11_RS25585;product=hypothetical protein;protein_id=WP_001390336.1;transl_table=11 NZ_JHDH01000124.1 RefSeq pseudogene 2840 3051 . - . ID=gene-AB11_RS12275;Name=hha;gbkey=Gene;gene=hha;gene_biotype=pseudogene;locus_tag=AB11_RS12275;old_locus_tag=AB11_2190;pseudo=true NZ_JHDH01000124.1 Protein Homology CDS 2840 3051 . - 0 ID=cds-AB11_RS12275;Parent=gene-AB11_RS12275;Note=frameshifted;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453334.1;locus_tag=AB11_RS12275;product=hemolysin expression modulator Hha;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000125.1 1 3902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000125.1 RefSeq region 1 3902 . + . ID=NZ_JHDH01000125.1:1..3902;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000125.1 RefSeq gene 162 368 . + . ID=gene-AB11_RS12280;Name=AB11_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12280;old_locus_tag=AB11_2192 NZ_JHDH01000125.1 Protein Homology CDS 162 368 . + 0 ID=cds-WP_000211310.1;Parent=gene-AB11_RS12280;Dbxref=GenBank:WP_000211310.1;Name=WP_000211310.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AB11_RS12280;product=helix-turn-helix transcriptional regulator;protein_id=WP_000211310.1;transl_table=11 NZ_JHDH01000125.1 RefSeq gene 463 1065 . + . ID=gene-AB11_RS12285;Name=AB11_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12285;old_locus_tag=AB11_2193 NZ_JHDH01000125.1 Protein Homology CDS 463 1065 . + 0 ID=cds-WP_001387788.1;Parent=gene-AB11_RS12285;Dbxref=GenBank:WP_001387788.1;Name=WP_001387788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546339.1;locus_tag=AB11_RS12285;product=hypothetical protein;protein_id=WP_001387788.1;transl_table=11 NZ_JHDH01000125.1 RefSeq pseudogene 1702 2085 . + . ID=gene-AB11_RS12290;Name=AB11_RS12290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12290;old_locus_tag=AB11_2195;partial=true;pseudo=true;start_range=.,1702 NZ_JHDH01000125.1 Protein Homology CDS 1702 2085 . + 0 ID=cds-AB11_RS12290;Parent=gene-AB11_RS12290;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750026.1;locus_tag=AB11_RS12290;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,1702;transl_table=11 NZ_JHDH01000125.1 RefSeq pseudogene 3308 3902 . + . ID=gene-AB11_RS12295;Name=AB11_RS12295;end_range=3902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12295;old_locus_tag=AB11_2198;partial=true;pseudo=true NZ_JHDH01000125.1 Protein Homology CDS 3308 3902 . + 0 ID=cds-AB11_RS12295;Parent=gene-AB11_RS12295;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3902,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS12295;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000126.1 1 7069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000126.1 RefSeq region 1 7069 . + . ID=NZ_JHDH01000126.1:1..7069;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000126.1 RefSeq pseudogene 1 305 . + . ID=gene-AB11_RS12300;Name=AB11_RS12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12300;old_locus_tag=AB11_2199;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000126.1 Protein Homology CDS 1 305 . + 2 ID=cds-AB11_RS12300;Parent=gene-AB11_RS12300;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS12300;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000126.1 RefSeq pseudogene 322 747 . + . ID=gene-AB11_RS12305;Name=AB11_RS12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12305;old_locus_tag=AB11_2200;partial=true;pseudo=true;start_range=.,322 NZ_JHDH01000126.1 Protein Homology CDS 322 747 . + 0 ID=cds-AB11_RS12305;Parent=gene-AB11_RS12305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767894.1;locus_tag=AB11_RS12305;partial=true;product=hypothetical protein;pseudo=true;start_range=.,322;transl_table=11 NZ_JHDH01000126.1 RefSeq gene 846 1718 . + . ID=gene-AB11_RS12310;Name=AB11_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12310;old_locus_tag=AB11_2201 NZ_JHDH01000126.1 Protein Homology CDS 846 1718 . + 0 ID=cds-WP_001069760.1;Parent=gene-AB11_RS12310;Dbxref=GenBank:WP_001069760.1;Name=WP_001069760.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB11_RS12310;product=GTPase family protein;protein_id=WP_001069760.1;transl_table=11 NZ_JHDH01000126.1 RefSeq gene 2091 4937 . + . ID=gene-AB11_RS12315;Name=AB11_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12315;old_locus_tag=AB11_2202 NZ_JHDH01000126.1 Protein Homology CDS 2091 4937 . + 0 ID=cds-WP_000820574.1;Parent=gene-AB11_RS12315;Dbxref=GenBank:WP_000820574.1;Name=WP_000820574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB11_RS12315;product=Ag43/Cah family autotransporter adhesin;protein_id=WP_000820574.1;transl_table=11 NZ_JHDH01000126.1 RefSeq pseudogene 5008 5203 . + . ID=gene-AB11_RS12320;Name=AB11_RS12320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12320;old_locus_tag=AB11_2203;pseudo=true NZ_JHDH01000126.1 Protein Homology CDS 5008 5203 . + 0 ID=cds-AB11_RS12320;Parent=gene-AB11_RS12320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117568.1;locus_tag=AB11_RS12320;product=DUF905 family protein;pseudo=true;transl_table=11 NZ_JHDH01000126.1 RefSeq gene 5321 6139 . + . ID=gene-AB11_RS12325;Name=AB11_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12325;old_locus_tag=AB11_2204 NZ_JHDH01000126.1 Protein Homology CDS 5321 6139 . + 0 ID=cds-WP_001234716.1;Parent=gene-AB11_RS12325;Dbxref=GenBank:WP_001234716.1;Name=WP_001234716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AB11_RS12325;product=DUF932 domain-containing protein;protein_id=WP_001234716.1;transl_table=11 NZ_JHDH01000126.1 RefSeq gene 6139 6312 . + . ID=gene-AB11_RS12330;Name=AB11_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12330;old_locus_tag=AB11_2205 NZ_JHDH01000126.1 GeneMarkS-2+ CDS 6139 6312 . + 0 ID=cds-WP_001183321.1;Parent=gene-AB11_RS12330;Dbxref=GenBank:WP_001183321.1;Name=WP_001183321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS12330;product=hypothetical protein;protein_id=WP_001183321.1;transl_table=11 NZ_JHDH01000126.1 RefSeq gene 6478 6951 . + . ID=gene-AB11_RS12335;Name=AB11_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12335;old_locus_tag=AB11_2206 NZ_JHDH01000126.1 Protein Homology CDS 6478 6951 . + 0 ID=cds-WP_001387789.1;Parent=gene-AB11_RS12335;Dbxref=GenBank:WP_001387789.1;Name=WP_001387789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AB11_RS12335;product=antirestriction protein;protein_id=WP_001387789.1;transl_table=11 NZ_JHDH01000126.1 RefSeq pseudogene 6967 7069 . + . ID=gene-AB11_RS25590;Name=AB11_RS25590;end_range=7069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25590;old_locus_tag=AB11_2207;partial=true;pseudo=true NZ_JHDH01000126.1 Protein Homology CDS 6967 7069 . + 0 ID=cds-AB11_RS25590;Parent=gene-AB11_RS25590;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB11_RS25590;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000127.1 1 138427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000127.1 RefSeq region 1 138427 . + . ID=NZ_JHDH01000127.1:1..138427;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000127.1 RefSeq pseudogene 1 196 . + . ID=gene-AB11_RS12340;Name=AB11_RS12340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12340;old_locus_tag=AB11_2208;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000127.1 Protein Homology CDS 1 196 . + 1 ID=cds-AB11_RS12340;Parent=gene-AB11_RS12340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AB11_RS12340;partial=true;product=DUF932 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 278 757 . + . ID=gene-AB11_RS12345;Name=AB11_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12345;old_locus_tag=AB11_2209 NZ_JHDH01000127.1 Protein Homology CDS 278 757 . + 0 ID=cds-WP_000860076.1;Parent=gene-AB11_RS12345;Dbxref=GenBank:WP_000860076.1;Name=WP_000860076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310829.1;locus_tag=AB11_RS12345;product=antirestriction protein;protein_id=WP_000860076.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 773 1249 . + . ID=gene-AB11_RS12350;Name=yeeS;gbkey=Gene;gene=yeeS;gene_biotype=protein_coding;locus_tag=AB11_RS12350;old_locus_tag=AB11_2210 NZ_JHDH01000127.1 Protein Homology CDS 773 1249 . + 0 ID=cds-WP_001186773.1;Parent=gene-AB11_RS12350;Dbxref=GenBank:WP_001186773.1;Name=WP_001186773.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;gene=yeeS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB11_RS12350;product=JAB domain-containing protein;protein_id=WP_001186773.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 1312 1533 . + . ID=gene-AB11_RS12355;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=AB11_RS12355;old_locus_tag=AB11_2211 NZ_JHDH01000127.1 Protein Homology CDS 1312 1533 . + 0 ID=cds-WP_000692323.1;Parent=gene-AB11_RS12355;Dbxref=GenBank:WP_000692323.1;Name=WP_000692323.1;gbkey=CDS;gene=yeeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310831.1;locus_tag=AB11_RS12355;product=DUF987 domain-containing protein;protein_id=WP_000692323.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 1607 1975 . + . ID=gene-AB11_RS12360;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;locus_tag=AB11_RS12360;old_locus_tag=AB11_2212 NZ_JHDH01000127.1 Protein Homology CDS 1607 1975 . + 0 ID=cds-WP_001285584.1;Parent=gene-AB11_RS12360;Dbxref=GenBank:WP_001285584.1;Name=WP_001285584.1;gbkey=CDS;gene=cbeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416508.1;locus_tag=AB11_RS12360;product=type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA;protein_id=WP_001285584.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 2064 2438 . + . ID=gene-AB11_RS12365;Name=cbtA;gbkey=Gene;gene=cbtA;gene_biotype=protein_coding;locus_tag=AB11_RS12365;old_locus_tag=AB11_2213 NZ_JHDH01000127.1 Protein Homology CDS 2064 2438 . + 0 ID=cds-WP_000854814.1;Parent=gene-AB11_RS12365;Dbxref=GenBank:WP_000854814.1;Name=WP_000854814.1;gbkey=CDS;gene=cbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416509.1;locus_tag=AB11_RS12365;product=type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA;protein_id=WP_000854814.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 2435 2629 . + . ID=gene-AB11_RS12370;Name=yeeW;gbkey=Gene;gene=yeeW;gene_biotype=protein_coding;locus_tag=AB11_RS12370;old_locus_tag=AB11_2214 NZ_JHDH01000127.1 Protein Homology CDS 2435 2629 . + 0 ID=cds-WP_000988600.1;Parent=gene-AB11_RS12370;Dbxref=GenBank:WP_000988600.1;Name=WP_000988600.1;gbkey=CDS;gene=yeeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310834.2;locus_tag=AB11_RS12370;product=DUF5983 family protein;protein_id=WP_000988600.1;transl_table=11 NZ_JHDH01000127.1 RefSeq pseudogene 2663 2755 . + . ID=gene-AB11_RS12375;Name=AB11_RS12375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12375;partial=true;pseudo=true;start_range=.,2663 NZ_JHDH01000127.1 Protein Homology CDS 2663 2755 . + 0 ID=cds-AB11_RS12375;Parent=gene-AB11_RS12375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AB11_RS12375;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,2663;transl_table=11 NZ_JHDH01000127.1 RefSeq pseudogene 3044 3181 . - . ID=gene-AB11_RS12380;Name=AB11_RS12380;end_range=3181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12380;partial=true;pseudo=true NZ_JHDH01000127.1 Protein Homology CDS 3044 3181 . - 0 ID=cds-AB11_RS12380;Parent=gene-AB11_RS12380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AB11_RS12380;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 3244 3426 . + . ID=gene-AB11_RS12385;Name=AB11_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12385 NZ_JHDH01000127.1 Protein Homology CDS 3244 3426 . + 0 ID=cds-WP_001016348.1;Parent=gene-AB11_RS12385;Dbxref=GenBank:WP_001016348.1;Name=WP_001016348.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296208.1;locus_tag=AB11_RS12385;product=EutP/PduV family microcompartment system protein;protein_id=WP_001016348.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 3527 3856 . - . ID=gene-AB11_RS12390;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AB11_RS12390;old_locus_tag=AB11_2215 NZ_JHDH01000127.1 Protein Homology CDS 3527 3856 . - 0 ID=cds-WP_000450409.1;Parent=gene-AB11_RS12390;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AB11_RS12390;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 4028 5086 . - . ID=gene-AB11_RS12395;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AB11_RS12395;old_locus_tag=AB11_2217 NZ_JHDH01000127.1 Protein Homology CDS 4028 5086 . - 0 ID=cds-WP_001200891.1;Parent=gene-AB11_RS12395;Dbxref=GenBank:WP_001200891.1;Name=WP_001200891.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AB11_RS12395;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 5285 5758 . - . ID=gene-AB11_RS12400;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AB11_RS12400;old_locus_tag=AB11_2218 NZ_JHDH01000127.1 Protein Homology CDS 5285 5758 . - 0 ID=cds-WP_001105389.1;Parent=gene-AB11_RS12400;Dbxref=GenBank:WP_001105389.1;Name=WP_001105389.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AB11_RS12400;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105389.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 5877 7043 . - . ID=gene-AB11_RS12405;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AB11_RS12405;old_locus_tag=AB11_2219 NZ_JHDH01000127.1 Protein Homology CDS 5877 7043 . - 0 ID=cds-WP_001296209.1;Parent=gene-AB11_RS12405;Dbxref=GenBank:WP_001296209.1;Name=WP_001296209.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AB11_RS12405;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_001296209.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 7232 8659 . + . ID=gene-AB11_RS12410;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AB11_RS12410;old_locus_tag=AB11_2220 NZ_JHDH01000127.1 Protein Homology CDS 7232 8659 . + 0 ID=cds-WP_000980612.1;Parent=gene-AB11_RS12410;Dbxref=GenBank:WP_000980612.1;Name=WP_000980612.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416515.1;locus_tag=AB11_RS12410;product=exodeoxyribonuclease I;protein_id=WP_000980612.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 8702 8929 . - . ID=gene-AB11_RS12415;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AB11_RS12415;old_locus_tag=AB11_2221 NZ_JHDH01000127.1 Protein Homology CDS 8702 8929 . - 0 ID=cds-WP_000985273.1;Parent=gene-AB11_RS12415;Dbxref=GenBank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AB11_RS12415;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 8943 10001 . - . ID=gene-AB11_RS12420;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AB11_RS12420;old_locus_tag=AB11_2222 NZ_JHDH01000127.1 Protein Homology CDS 8943 10001 . - 0 ID=cds-WP_032223502.1;Parent=gene-AB11_RS12420;Dbxref=GenBank:WP_032223502.1;Name=WP_032223502.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AB11_RS12420;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_032223502.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 10180 11538 . - . ID=gene-AB11_RS12425;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AB11_RS12425;old_locus_tag=AB11_2224 NZ_JHDH01000127.1 Protein Homology CDS 10180 11538 . - 0 ID=cds-WP_000019197.1;Parent=gene-AB11_RS12425;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AB11_RS12425;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 11528 11590 . - . ID=gene-AB11_RS12430;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AB11_RS12430 NZ_JHDH01000127.1 Protein Homology CDS 11528 11590 . - 0 ID=cds-WP_010723108.1;Parent=gene-AB11_RS12430;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AB11_RS12430;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 11805 12734 . - . ID=gene-AB11_RS12435;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AB11_RS12435;old_locus_tag=AB11_2225 NZ_JHDH01000127.1 Protein Homology CDS 11805 12734 . - 0 ID=cds-WP_001658507.1;Parent=gene-AB11_RS12435;Dbxref=GenBank:WP_001658507.1;Name=WP_001658507.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AB11_RS12435;product=LysR substrate-binding domain-containing protein;protein_id=WP_001658507.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 12780 13604 . - . ID=gene-AB11_RS12440;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AB11_RS12440;old_locus_tag=AB11_2226 NZ_JHDH01000127.1 Protein Homology CDS 12780 13604 . - 0 ID=cds-WP_000754737.1;Parent=gene-AB11_RS12440;Dbxref=GenBank:WP_000754737.1;Name=WP_000754737.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AB11_RS12440;product=SDR family oxidoreductase;protein_id=WP_000754737.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 13687 13941 . - . ID=gene-AB11_RS12445;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AB11_RS12445;old_locus_tag=AB11_2227 NZ_JHDH01000127.1 Protein Homology CDS 13687 13941 . - 0 ID=cds-WP_000767829.1;Parent=gene-AB11_RS12445;Dbxref=GenBank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AB11_RS12445;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 13938 14189 . - . ID=gene-AB11_RS12450;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AB11_RS12450;old_locus_tag=AB11_2228 NZ_JHDH01000127.1 Protein Homology CDS 13938 14189 . - 0 ID=cds-WP_001259255.1;Parent=gene-AB11_RS12450;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AB11_RS12450;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 14472 14522 . + . ID=gene-AB11_RS12455;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AB11_RS12455 NZ_JHDH01000127.1 Protein Homology CDS 14472 14522 . + 0 ID=cds-WP_001364200.1;Parent=gene-AB11_RS12455;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AB11_RS12455;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JHDH01000127.1 cmsearch sequence_feature 14498 14621 . + . ID=id-NZ_JHDH01000127.1:14498..14621;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000127.1 RefSeq gene 14668 15567 . + . ID=gene-AB11_RS12460;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AB11_RS12460;old_locus_tag=AB11_2229 NZ_JHDH01000127.1 Protein Homology CDS 14668 15567 . + 0 ID=cds-WP_000131782.1;Parent=gene-AB11_RS12460;Dbxref=GenBank:WP_000131782.1;Name=WP_000131782.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AB11_RS12460;product=ATP phosphoribosyltransferase;protein_id=WP_000131782.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 15573 16877 . + . ID=gene-AB11_RS12465;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AB11_RS12465;old_locus_tag=AB11_2230 NZ_JHDH01000127.1 Protein Homology CDS 15573 16877 . + 0 ID=cds-WP_001355813.1;Parent=gene-AB11_RS12465;Dbxref=GenBank:WP_001355813.1;Name=WP_001355813.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310848.1;locus_tag=AB11_RS12465;product=histidinol dehydrogenase;protein_id=WP_001355813.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 16874 17944 . + . ID=gene-AB11_RS12470;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AB11_RS12470;old_locus_tag=AB11_2231 NZ_JHDH01000127.1 Protein Homology CDS 16874 17944 . + 0 ID=cds-WP_001099220.1;Parent=gene-AB11_RS12470;Dbxref=GenBank:WP_001099220.1;Name=WP_001099220.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310849.1;locus_tag=AB11_RS12470;product=histidinol-phosphate transaminase;protein_id=WP_001099220.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 17944 19011 . + . ID=gene-AB11_RS12475;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AB11_RS12475;old_locus_tag=AB11_2232 NZ_JHDH01000127.1 Protein Homology CDS 17944 19011 . + 0 ID=cds-WP_000080142.1;Parent=gene-AB11_RS12475;Dbxref=GenBank:WP_000080142.1;Name=WP_000080142.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310850.2;locus_tag=AB11_RS12475;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080142.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 19011 19601 . + . ID=gene-AB11_RS12480;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AB11_RS12480;old_locus_tag=AB11_2233 NZ_JHDH01000127.1 Protein Homology CDS 19011 19601 . + 0 ID=cds-WP_001103574.1;Parent=gene-AB11_RS12480;Dbxref=GenBank:WP_001103574.1;Name=WP_001103574.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AB11_RS12480;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103574.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 19601 20338 . + . ID=gene-AB11_RS12485;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AB11_RS12485;old_locus_tag=AB11_2234 NZ_JHDH01000127.1 Protein Homology CDS 19601 20338 . + 0 ID=cds-WP_000586449.1;Parent=gene-AB11_RS12485;Dbxref=GenBank:WP_000586449.1;Name=WP_000586449.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AB11_RS12485;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586449.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 20320 21096 . + . ID=gene-AB11_RS12490;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AB11_RS12490;old_locus_tag=AB11_2235 NZ_JHDH01000127.1 Protein Homology CDS 20320 21096 . + 0 ID=cds-WP_000880182.1;Parent=gene-AB11_RS12490;Dbxref=GenBank:WP_000880182.1;Name=WP_000880182.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AB11_RS12490;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880182.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 21090 21701 . + . ID=gene-AB11_RS12495;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AB11_RS12495;old_locus_tag=AB11_2236 NZ_JHDH01000127.1 Protein Homology CDS 21090 21701 . + 0 ID=cds-WP_000954893.1;Parent=gene-AB11_RS12495;Dbxref=GenBank:WP_000954893.1;Name=WP_000954893.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AB11_RS12495;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954893.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 21798 22775 . - . ID=gene-AB11_RS12500;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AB11_RS12500;old_locus_tag=AB11_2237 NZ_JHDH01000127.1 Protein Homology CDS 21798 22775 . - 0 ID=cds-WP_001389124.1;Parent=gene-AB11_RS12500;Dbxref=GenBank:WP_001389124.1;Name=WP_001389124.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AB11_RS12500;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_001389124.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 22921 24087 . - . ID=gene-AB11_RS12505;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AB11_RS12505;old_locus_tag=AB11_2238 NZ_JHDH01000127.1 Protein Homology CDS 22921 24087 . - 0 ID=cds-WP_032223503.1;Parent=gene-AB11_RS12505;Dbxref=GenBank:WP_032223503.1;Name=WP_032223503.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310856.1;locus_tag=AB11_RS12505;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032223503.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 24332 25738 . - . ID=gene-AB11_RS12510;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AB11_RS12510;old_locus_tag=AB11_2239 NZ_JHDH01000127.1 Protein Homology CDS 24332 25738 . - 0 ID=cds-WP_032223505.1;Parent=gene-AB11_RS12510;Dbxref=GenBank:WP_032223505.1;Name=WP_032223505.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AB11_RS12510;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032223505.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 25857 26876 . - . ID=gene-AB11_RS12515;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AB11_RS12515;old_locus_tag=AB11_2240 NZ_JHDH01000127.1 Protein Homology CDS 25857 26876 . - 0 ID=cds-WP_032223506.1;Parent=gene-AB11_RS12515;Dbxref=GenBank:WP_032223506.1;Name=WP_032223506.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996577.1;locus_tag=AB11_RS12515;product=UDP-glucose 4-epimerase GalE;protein_id=WP_032223506.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 26890 27699 . - . ID=gene-AB11_RS12520;Name=AB11_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12520;old_locus_tag=AB11_2241 NZ_JHDH01000127.1 Protein Homology CDS 26890 27699 . - 0 ID=cds-WP_032208178.1;Parent=gene-AB11_RS12520;Dbxref=GenBank:WP_032208178.1;Name=WP_032208178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673483.1;locus_tag=AB11_RS12520;product=glycosyltransferase;protein_id=WP_032208178.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 27696 28343 . - . ID=gene-AB11_RS12525;Name=AB11_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12525 NZ_JHDH01000127.1 Protein Homology CDS 27696 28343 . - 0 ID=cds-WP_032223508.1;Parent=gene-AB11_RS12525;Dbxref=GenBank:WP_032223508.1;Name=WP_032223508.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=AB11_RS12525;product=glycosyltransferase family 4 protein;protein_id=WP_032223508.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 28288 28740 . - . ID=gene-AB11_RS25235;Name=AB11_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25235 NZ_JHDH01000127.1 GeneMarkS-2+ CDS 28288 28740 . - 0 ID=cds-WP_205957704.1;Parent=gene-AB11_RS25235;Dbxref=GenBank:WP_205957704.1;Name=WP_205957704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25235;product=hypothetical protein;protein_id=WP_205957704.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 28755 29699 . - . ID=gene-AB11_RS12530;Name=AB11_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12530;old_locus_tag=AB11_2243 NZ_JHDH01000127.1 Protein Homology CDS 28755 29699 . - 0 ID=cds-WP_032223509.1;Parent=gene-AB11_RS12530;Dbxref=GenBank:WP_032223509.1;Name=WP_032223509.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF025025.6;locus_tag=AB11_RS12530;product=glycosyltransferase family 2 protein;protein_id=WP_032223509.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 29686 30486 . - . ID=gene-AB11_RS12535;Name=AB11_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12535;old_locus_tag=AB11_2244 NZ_JHDH01000127.1 Protein Homology CDS 29686 30486 . - 0 ID=cds-WP_047091193.1;Parent=gene-AB11_RS12535;Dbxref=GenBank:WP_047091193.1;Name=WP_047091193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AB11_RS12535;product=glycosyltransferase;protein_id=WP_047091193.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 30479 31801 . - . ID=gene-AB11_RS12540;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=protein_coding;locus_tag=AB11_RS12540;old_locus_tag=AB11_2245 NZ_JHDH01000127.1 Protein Homology CDS 30479 31801 . - 0 ID=cds-WP_032223511.1;Parent=gene-AB11_RS12540;Dbxref=GenBank:WP_032223511.1;Name=WP_032223511.1;gbkey=CDS;gene=wzy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033808138.1;locus_tag=AB11_RS12540;product=O107/O117 family O-antigen polymerase;protein_id=WP_032223511.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 31794 33011 . - . ID=gene-AB11_RS12545;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;locus_tag=AB11_RS12545;old_locus_tag=AB11_2246 NZ_JHDH01000127.1 Protein Homology CDS 31794 33011 . - 0 ID=cds-WP_032223512.1;Parent=gene-AB11_RS12545;Dbxref=GenBank:WP_032223512.1;Name=WP_032223512.1;gbkey=CDS;gene=wzx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032223512.1;locus_tag=AB11_RS12545;product=O107/O117 family O-antigen flippase;protein_id=WP_032223512.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 33011 33553 . - . ID=gene-AB11_RS12550;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AB11_RS12550;old_locus_tag=AB11_2247 NZ_JHDH01000127.1 Protein Homology CDS 33011 33553 . - 0 ID=cds-WP_032208168.1;Parent=gene-AB11_RS12550;Dbxref=GenBank:WP_032208168.1;Name=WP_032208168.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100785.1;locus_tag=AB11_RS12550;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_032208168.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 33558 34436 . - . ID=gene-AB11_RS12555;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AB11_RS12555;old_locus_tag=AB11_2248 NZ_JHDH01000127.1 Protein Homology CDS 33558 34436 . - 0 ID=cds-WP_032223514.1;Parent=gene-AB11_RS12555;Dbxref=GenBank:WP_032223514.1;Name=WP_032223514.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=AB11_RS12555;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032223514.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 34494 35393 . - . ID=gene-AB11_RS12560;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AB11_RS12560;old_locus_tag=AB11_2249 NZ_JHDH01000127.1 Protein Homology CDS 34494 35393 . - 0 ID=cds-WP_032223515.1;Parent=gene-AB11_RS12560;Dbxref=GenBank:WP_032223515.1;Name=WP_032223515.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707935.1;locus_tag=AB11_RS12560;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_032223515.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 35393 36478 . - . ID=gene-AB11_RS12565;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AB11_RS12565;old_locus_tag=AB11_2250 NZ_JHDH01000127.1 Protein Homology CDS 35393 36478 . - 0 ID=cds-WP_032223518.1;Parent=gene-AB11_RS12565;Dbxref=GenBank:WP_032223518.1;Name=WP_032223518.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416545.1;locus_tag=AB11_RS12565;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_032223518.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 36850 37743 . - . ID=gene-AB11_RS12570;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AB11_RS12570;old_locus_tag=AB11_2251 NZ_JHDH01000127.1 Protein Homology CDS 36850 37743 . - 0 ID=cds-WP_000183060.1;Parent=gene-AB11_RS12570;Dbxref=GenBank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AB11_RS12570;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183060.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 37986 38981 . - . ID=gene-AB11_RS12575;Name=AB11_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12575;old_locus_tag=AB11_2252 NZ_JHDH01000127.1 Protein Homology CDS 37986 38981 . - 0 ID=cds-WP_000999466.1;Parent=gene-AB11_RS12575;Dbxref=GenBank:WP_000999466.1;Name=WP_000999466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=AB11_RS12575;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2Coctacis-undecaprenol 4-epimerase;protein_id=WP_000999466.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 39139 40533 . - . ID=gene-AB11_RS12580;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AB11_RS12580;old_locus_tag=AB11_2253 NZ_JHDH01000127.1 Protein Homology CDS 39139 40533 . - 0 ID=cds-WP_032223520.1;Parent=gene-AB11_RS12580;Dbxref=GenBank:WP_032223520.1;Name=WP_032223520.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416547.1;locus_tag=AB11_RS12580;product=colanic acid biosynthesis protein WcaM;protein_id=WP_032223520.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 40544 41764 . - . ID=gene-AB11_RS12585;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AB11_RS12585;old_locus_tag=AB11_2254 NZ_JHDH01000127.1 Protein Homology CDS 40544 41764 . - 0 ID=cds-WP_023140359.1;Parent=gene-AB11_RS12585;Dbxref=GenBank:WP_023140359.1;Name=WP_023140359.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AB11_RS12585;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_023140359.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 41761 43041 . - . ID=gene-AB11_RS12590;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AB11_RS12590;old_locus_tag=AB11_2255 NZ_JHDH01000127.1 Protein Homology CDS 41761 43041 . - 0 ID=cds-WP_000770805.1;Parent=gene-AB11_RS12590;Dbxref=GenBank:WP_000770805.1;Name=WP_000770805.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AB11_RS12590;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770805.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 43317 44795 . - . ID=gene-AB11_RS12595;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AB11_RS12595;old_locus_tag=AB11_2256 NZ_JHDH01000127.1 Protein Homology CDS 43317 44795 . - 0 ID=cds-WP_032223522.1;Parent=gene-AB11_RS12595;Dbxref=GenBank:WP_032223522.1;Name=WP_032223522.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AB11_RS12595;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_032223522.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 44797 46191 . - . ID=gene-AB11_RS12600;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AB11_RS12600;old_locus_tag=AB11_2257 NZ_JHDH01000127.1 Protein Homology CDS 44797 46191 . - 0 ID=cds-WP_000183124.1;Parent=gene-AB11_RS12600;Dbxref=GenBank:WP_000183124.1;Name=WP_000183124.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=AB11_RS12600;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183124.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 46246 47616 . - . ID=gene-AB11_RS12605;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AB11_RS12605;old_locus_tag=AB11_2258 NZ_JHDH01000127.1 Protein Homology CDS 46246 47616 . - 0 ID=cds-WP_001358507.1;Parent=gene-AB11_RS12605;Dbxref=GenBank:WP_001358507.1;Name=WP_001358507.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310880.1;locus_tag=AB11_RS12605;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_001358507.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 47809 49245 . - . ID=gene-AB11_RS12610;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AB11_RS12610;old_locus_tag=AB11_2259 NZ_JHDH01000127.1 Protein Homology CDS 47809 49245 . - 0 ID=cds-WP_000079285.1;Parent=gene-AB11_RS12610;Dbxref=GenBank:WP_000079285.1;Name=WP_000079285.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AB11_RS12610;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079285.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 49248 50471 . - . ID=gene-AB11_RS12615;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AB11_RS12615;old_locus_tag=AB11_2260 NZ_JHDH01000127.1 Protein Homology CDS 49248 50471 . - 0 ID=cds-WP_000699701.1;Parent=gene-AB11_RS12615;Dbxref=GenBank:WP_000699701.1;Name=WP_000699701.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AB11_RS12615;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699701.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 50468 50947 . - . ID=gene-AB11_RS12620;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=AB11_RS12620;old_locus_tag=AB11_2261 NZ_JHDH01000127.1 Protein Homology CDS 50468 50947 . - 0 ID=cds-WP_000479827.1;Parent=gene-AB11_RS12620;Dbxref=GenBank:WP_000479827.1;Name=WP_000479827.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AB11_RS12620;product=GDP-mannose mannosyl hydrolase;protein_id=WP_000479827.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 50950 51915 . - . ID=gene-AB11_RS12625;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AB11_RS12625;old_locus_tag=AB11_2262 NZ_JHDH01000127.1 Protein Homology CDS 50950 51915 . - 0 ID=cds-WP_000043615.1;Parent=gene-AB11_RS12625;Dbxref=GenBank:WP_000043615.1;Name=WP_000043615.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=AB11_RS12625;product=GDP-L-fucose synthase;protein_id=WP_000043615.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 51918 53039 . - . ID=gene-AB11_RS12630;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AB11_RS12630;old_locus_tag=AB11_2263 NZ_JHDH01000127.1 Protein Homology CDS 51918 53039 . - 0 ID=cds-WP_000048190.1;Parent=gene-AB11_RS12630;Dbxref=GenBank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AB11_RS12630;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 53065 53613 . - . ID=gene-AB11_RS12635;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AB11_RS12635;old_locus_tag=AB11_2264 NZ_JHDH01000127.1 Protein Homology CDS 53065 53613 . - 0 ID=cds-WP_001153547.1;Parent=gene-AB11_RS12635;Dbxref=GenBank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AB11_RS12635;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 53629 54375 . - . ID=gene-AB11_RS12640;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AB11_RS12640;old_locus_tag=AB11_2265 NZ_JHDH01000127.1 Protein Homology CDS 53629 54375 . - 0 ID=cds-WP_000927058.1;Parent=gene-AB11_RS12640;Dbxref=GenBank:WP_000927058.1;Name=WP_000927058.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310887.1;locus_tag=AB11_RS12640;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927058.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 54386 55603 . - . ID=gene-AB11_RS12645;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AB11_RS12645;old_locus_tag=AB11_2266 NZ_JHDH01000127.1 Protein Homology CDS 54386 55603 . - 0 ID=cds-WP_000107816.1;Parent=gene-AB11_RS12645;Dbxref=GenBank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AB11_RS12645;product=colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 55578 56795 . - . ID=gene-AB11_RS12650;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AB11_RS12650;old_locus_tag=AB11_2267 NZ_JHDH01000127.1 Protein Homology CDS 55578 56795 . - 0 ID=cds-WP_032223524.1;Parent=gene-AB11_RS12650;Dbxref=GenBank:WP_032223524.1;Name=WP_032223524.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=AB11_RS12650;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_032223524.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 56792 57280 . - . ID=gene-AB11_RS12655;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AB11_RS12655;old_locus_tag=AB11_2268 NZ_JHDH01000127.1 Protein Homology CDS 56792 57280 . - 0 ID=cds-WP_000888740.1;Parent=gene-AB11_RS12655;Dbxref=GenBank:WP_000888740.1;Name=WP_000888740.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AB11_RS12655;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888740.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 57283 58122 . - . ID=gene-AB11_RS12660;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AB11_RS12660;old_locus_tag=AB11_2269 NZ_JHDH01000127.1 Protein Homology CDS 57283 58122 . - 0 ID=cds-WP_000654503.1;Parent=gene-AB11_RS12660;Dbxref=GenBank:WP_000654503.1;Name=WP_000654503.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AB11_RS12660;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654503.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 58300 60462 . - . ID=gene-AB11_RS12665;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AB11_RS12665;old_locus_tag=AB11_2270 NZ_JHDH01000127.1 Protein Homology CDS 58300 60462 . - 0 ID=cds-WP_001543932.1;Parent=gene-AB11_RS12665;Dbxref=GenBank:WP_001543932.1;Name=WP_001543932.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AB11_RS12665;product=tyrosine-protein kinase Wzc;protein_id=WP_001543932.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 60465 60908 . - . ID=gene-AB11_RS12670;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AB11_RS12670;old_locus_tag=AB11_2271 NZ_JHDH01000127.1 Protein Homology CDS 60465 60908 . - 0 ID=cds-WP_000482901.1;Parent=gene-AB11_RS12670;Dbxref=GenBank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AB11_RS12670;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 60914 62053 . - . ID=gene-AB11_RS12675;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AB11_RS12675;old_locus_tag=AB11_2272 NZ_JHDH01000127.1 Protein Homology CDS 60914 62053 . - 0 ID=cds-WP_000978094.1;Parent=gene-AB11_RS12675;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AB11_RS12675;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 62712 64295 . + . ID=gene-AB11_RS12680;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AB11_RS12680;old_locus_tag=AB11_2274 NZ_JHDH01000127.1 Protein Homology CDS 62712 64295 . + 0 ID=cds-WP_000454701.1;Parent=gene-AB11_RS12680;Dbxref=GenBank:WP_000454701.1;Name=WP_000454701.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416567.4;locus_tag=AB11_RS12680;product=TerC family protein;protein_id=WP_000454701.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 64569 66422 . - . ID=gene-AB11_RS12685;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AB11_RS12685;old_locus_tag=AB11_2275 NZ_JHDH01000127.1 Protein Homology CDS 64569 66422 . - 0 ID=cds-WP_001658538.1;Parent=gene-AB11_RS12685;Dbxref=GenBank:WP_001658538.1;Name=WP_001658538.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AB11_RS12685;product=outer membrane assembly protein AsmA;protein_id=WP_001658538.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 66444 67025 . - . ID=gene-AB11_RS12690;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AB11_RS12690;old_locus_tag=AB11_2276 NZ_JHDH01000127.1 Protein Homology CDS 66444 67025 . - 0 ID=cds-WP_001234767.1;Parent=gene-AB11_RS12690;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AB11_RS12690;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 67117 67758 . - . ID=gene-AB11_RS12695;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AB11_RS12695;old_locus_tag=AB11_2277 NZ_JHDH01000127.1 Protein Homology CDS 67117 67758 . - 0 ID=cds-WP_001295424.1;Parent=gene-AB11_RS12695;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AB11_RS12695;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 68076 71393 . + . ID=gene-AB11_RS12700;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AB11_RS12700;old_locus_tag=AB11_2278 NZ_JHDH01000127.1 Protein Homology CDS 68076 71393 . + 0 ID=cds-WP_032223526.1;Parent=gene-AB11_RS12700;Dbxref=GenBank:WP_032223526.1;Name=WP_032223526.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AB11_RS12700;product=diguanylate cyclase;protein_id=WP_032223526.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 71502 72350 . - . ID=gene-AB11_RS12705;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AB11_RS12705;old_locus_tag=AB11_2279 NZ_JHDH01000127.1 Protein Homology CDS 71502 72350 . - 0 ID=cds-WP_001556114.1;Parent=gene-AB11_RS12705;Dbxref=GenBank:WP_001556114.1;Name=WP_001556114.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416572.1;locus_tag=AB11_RS12705;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_001556114.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 72484 73836 . + . ID=gene-AB11_RS12710;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AB11_RS12710;old_locus_tag=AB11_2280 NZ_JHDH01000127.1 Protein Homology CDS 72484 73836 . + 0 ID=cds-WP_000469709.1;Parent=gene-AB11_RS12710;Dbxref=GenBank:WP_000469709.1;Name=WP_000469709.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AB11_RS12710;product=molecular chaperone;protein_id=WP_000469709.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 73848 75788 . - . ID=gene-AB11_RS12715;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AB11_RS12715;old_locus_tag=AB11_2281 NZ_JHDH01000127.1 Protein Homology CDS 73848 75788 . - 0 ID=cds-WP_001556115.1;Parent=gene-AB11_RS12715;Dbxref=GenBank:WP_001556115.1;Name=WP_001556115.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310906.2;locus_tag=AB11_RS12715;product=protein kinase YegI;protein_id=WP_001556115.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 75785 76546 . - . ID=gene-AB11_RS12720;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AB11_RS12720;old_locus_tag=AB11_2282 NZ_JHDH01000127.1 Protein Homology CDS 75785 76546 . - 0 ID=cds-WP_000119055.1;Parent=gene-AB11_RS12720;Dbxref=GenBank:WP_000119055.1;Name=WP_000119055.1;Ontology_term=GO:0004722;gbkey=CDS;gene=pphC;go_function=protein serine/threonine phosphatase activity|0004722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707964.1;locus_tag=AB11_RS12720;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_000119055.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 76543 77202 . - . ID=gene-AB11_RS12725;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AB11_RS12725;old_locus_tag=AB11_2283 NZ_JHDH01000127.1 Protein Homology CDS 76543 77202 . - 0 ID=cds-WP_000003153.1;Parent=gene-AB11_RS12725;Dbxref=GenBank:WP_000003153.1;Name=WP_000003153.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310908.1;locus_tag=AB11_RS12725;product=vWA domain-containing protein;protein_id=WP_000003153.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 77423 77482 . - . ID=gene-AB11_RS12730;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AB11_RS12730 NZ_JHDH01000127.1 Protein Homology CDS 77423 77482 . - 0 ID=cds-WP_010723109.1;Parent=gene-AB11_RS12730;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AB11_RS12730;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 77756 77812 . - . ID=gene-AB11_RS12735;Name=AB11_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12735 NZ_JHDH01000127.1 Protein Homology CDS 77756 77812 . - 0 ID=cds-WP_001386899.1;Parent=gene-AB11_RS12735;Dbxref=GenBank:WP_001386899.1;Name=WP_001386899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AB11_RS12735;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386899.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 78091 79338 . + . ID=gene-AB11_RS12740;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AB11_RS12740;old_locus_tag=AB11_2284 NZ_JHDH01000127.1 Protein Homology CDS 78091 79338 . + 0 ID=cds-WP_000679013.1;Parent=gene-AB11_RS12740;Dbxref=GenBank:WP_000679013.1;Name=WP_000679013.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AB11_RS12740;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000679013.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 79338 82460 . + . ID=gene-AB11_RS12745;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AB11_RS12745;old_locus_tag=AB11_2285 NZ_JHDH01000127.1 Protein Homology CDS 79338 82460 . + 0 ID=cds-WP_032223528.1;Parent=gene-AB11_RS12745;Dbxref=GenBank:WP_032223528.1;Name=WP_032223528.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AB11_RS12745;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_032223528.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 82461 85538 . + . ID=gene-AB11_RS12750;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AB11_RS12750;old_locus_tag=AB11_2286 NZ_JHDH01000127.1 Protein Homology CDS 82461 85538 . + 0 ID=cds-WP_021514701.1;Parent=gene-AB11_RS12750;Dbxref=GenBank:WP_021514701.1;Name=WP_021514701.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AB11_RS12750;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_021514701.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 85539 86954 . + . ID=gene-AB11_RS12755;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB11_RS12755;old_locus_tag=AB11_2287 NZ_JHDH01000127.1 Protein Homology CDS 85539 86954 . + 0 ID=cds-WP_032223529.1;Parent=gene-AB11_RS12755;Dbxref=GenBank:WP_032223529.1;Name=WP_032223529.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AB11_RS12755;product=MFS transporter;protein_id=WP_032223529.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 86951 88354 . + . ID=gene-AB11_RS12760;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AB11_RS12760;old_locus_tag=AB11_2288 NZ_JHDH01000127.1 Protein Homology CDS 86951 88354 . + 0 ID=cds-WP_000675150.1;Parent=gene-AB11_RS12760;Dbxref=GenBank:WP_000675150.1;Name=WP_000675150.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AB11_RS12760;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675150.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 88351 89073 . + . ID=gene-AB11_RS12765;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AB11_RS12765;old_locus_tag=AB11_2289 NZ_JHDH01000127.1 Protein Homology CDS 88351 89073 . + 0 ID=cds-WP_000137877.1;Parent=gene-AB11_RS12765;Dbxref=GenBank:WP_000137877.1;Name=WP_000137877.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AB11_RS12765;product=two-component system response regulator BaeR;protein_id=WP_000137877.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 89264 89596 . + . ID=gene-AB11_RS12770;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AB11_RS12770;old_locus_tag=AB11_2291 NZ_JHDH01000127.1 Protein Homology CDS 89264 89596 . + 0 ID=cds-WP_000929408.1;Parent=gene-AB11_RS12770;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AB11_RS12770;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 89743 91104 . + . ID=gene-AB11_RS12775;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=AB11_RS12775;old_locus_tag=AB11_2292 NZ_JHDH01000127.1 Protein Homology CDS 89743 91104 . + 0 ID=cds-WP_000476009.1;Parent=gene-AB11_RS12775;Dbxref=GenBank:WP_000476009.1;Name=WP_000476009.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AB11_RS12775;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_000476009.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 91435 91752 . - . ID=gene-AB11_RS12780;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AB11_RS12780;old_locus_tag=AB11_2293 NZ_JHDH01000127.1 Protein Homology CDS 91435 91752 . - 0 ID=cds-WP_001318299.1;Parent=gene-AB11_RS12780;Dbxref=GenBank:WP_001318299.1;Name=WP_001318299.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416589.2;locus_tag=AB11_RS12780;product=protein YegR;protein_id=WP_001318299.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 92158 93057 . + . ID=gene-AB11_RS12785;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AB11_RS12785;old_locus_tag=AB11_2294 NZ_JHDH01000127.1 Protein Homology CDS 92158 93057 . + 0 ID=cds-WP_000807356.1;Parent=gene-AB11_RS12785;Dbxref=GenBank:WP_000807356.1;Name=WP_000807356.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416590.1;locus_tag=AB11_RS12785;product=lipid kinase YegS;protein_id=WP_000807356.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 93131 93784 . - . ID=gene-AB11_RS12790;Name=AB11_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12790;old_locus_tag=AB11_2295 NZ_JHDH01000127.1 Protein Homology CDS 93131 93784 . - 0 ID=cds-WP_000481293.1;Parent=gene-AB11_RS12790;Dbxref=GenBank:WP_000481293.1;Name=WP_000481293.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231048.1;locus_tag=AB11_RS12790;product=HAD family hydrolase;protein_id=WP_000481293.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 93829 95106 . - . ID=gene-AB11_RS12795;Name=AB11_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12795;old_locus_tag=AB11_2296 NZ_JHDH01000127.1 Protein Homology CDS 93829 95106 . - 0 ID=cds-WP_021570886.1;Parent=gene-AB11_RS12795;Dbxref=GenBank:WP_021570886.1;Name=WP_021570886.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687715.1;locus_tag=AB11_RS12795;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_021570886.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 95175 96638 . - . ID=gene-AB11_RS12800;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AB11_RS12800;old_locus_tag=AB11_2297 NZ_JHDH01000127.1 Protein Homology CDS 95175 96638 . - 0 ID=cds-WP_032223533.1;Parent=gene-AB11_RS12800;Dbxref=GenBank:WP_032223533.1;Name=WP_032223533.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692898.1;locus_tag=AB11_RS12800;product=xylulokinase;protein_id=WP_032223533.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 96652 98019 . - . ID=gene-AB11_RS12805;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=AB11_RS12805;old_locus_tag=AB11_2298 NZ_JHDH01000127.1 Protein Homology CDS 96652 98019 . - 0 ID=cds-WP_001005232.1;Parent=gene-AB11_RS12805;Dbxref=GenBank:WP_001005232.1;Name=WP_001005232.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227903.1;locus_tag=AB11_RS12805;product=D-arabinitol 4-dehydrogenase;protein_id=WP_001005232.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 98232 99173 . + . ID=gene-AB11_RS12810;Name=AB11_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12810;old_locus_tag=AB11_2299 NZ_JHDH01000127.1 Protein Homology CDS 98232 99173 . + 0 ID=cds-WP_001030845.1;Parent=gene-AB11_RS12810;Dbxref=GenBank:WP_001030845.1;Name=WP_001030845.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227904.1;locus_tag=AB11_RS12810;product=sugar-binding transcriptional regulator;protein_id=WP_001030845.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 99176 100207 . - . ID=gene-AB11_RS12815;Name=AB11_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12815;old_locus_tag=AB11_2300 NZ_JHDH01000127.1 Protein Homology CDS 99176 100207 . - 0 ID=cds-WP_000198986.1;Parent=gene-AB11_RS12815;Dbxref=GenBank:WP_000198986.1;Name=WP_000198986.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397485.1;locus_tag=AB11_RS12815;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000198986.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 100369 101118 . + . ID=gene-AB11_RS12820;Name=AB11_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12820;old_locus_tag=AB11_2301 NZ_JHDH01000127.1 Protein Homology CDS 100369 101118 . + 0 ID=cds-WP_001016801.1;Parent=gene-AB11_RS12820;Dbxref=GenBank:WP_001016801.1;Name=WP_001016801.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=AB11_RS12820;product=SDR family oxidoreductase;protein_id=WP_001016801.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 101129 102733 . + . ID=gene-AB11_RS12825;Name=AB11_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12825;old_locus_tag=AB11_2302 NZ_JHDH01000127.1 Protein Homology CDS 101129 102733 . + 0 ID=cds-WP_000156561.1;Parent=gene-AB11_RS12825;Dbxref=GenBank:WP_000156561.1;Name=WP_000156561.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695951.1;locus_tag=AB11_RS12825;product=FGGY family pentulose kinase;protein_id=WP_000156561.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 102835 104109 . + . ID=gene-AB11_RS12830;Name=AB11_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12830;old_locus_tag=AB11_2303 NZ_JHDH01000127.1 Protein Homology CDS 102835 104109 . + 0 ID=cds-WP_000089321.1;Parent=gene-AB11_RS12830;Dbxref=GenBank:WP_000089321.1;Name=WP_000089321.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089318.1;locus_tag=AB11_RS12830;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_000089321.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 104166 105218 . - . ID=gene-AB11_RS12835;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AB11_RS12835;old_locus_tag=AB11_2304 NZ_JHDH01000127.1 Protein Homology CDS 104166 105218 . - 0 ID=cds-WP_032223536.1;Parent=gene-AB11_RS12835;Dbxref=GenBank:WP_032223536.1;Name=WP_032223536.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AB11_RS12835;product=class I fructose-bisphosphate aldolase;protein_id=WP_032223536.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 105475 106752 . + . ID=gene-AB11_RS12840;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AB11_RS12840;old_locus_tag=AB11_2305 NZ_JHDH01000127.1 Protein Homology CDS 105475 106752 . + 0 ID=cds-WP_000858484.1;Parent=gene-AB11_RS12840;Dbxref=GenBank:WP_000858484.1;Name=WP_000858484.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;gene=yegT;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AB11_RS12840;product=nucleoside permease;protein_id=WP_000858484.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 106749 107753 . + . ID=gene-AB11_RS12845;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AB11_RS12845;old_locus_tag=AB11_2306 NZ_JHDH01000127.1 Protein Homology CDS 106749 107753 . + 0 ID=cds-WP_000846215.1;Parent=gene-AB11_RS12845;Dbxref=GenBank:WP_000846215.1;Name=WP_000846215.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AB11_RS12845;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846215.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 107750 108715 . + . ID=gene-AB11_RS12850;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AB11_RS12850;old_locus_tag=AB11_2307 NZ_JHDH01000127.1 Protein Homology CDS 107750 108715 . + 0 ID=cds-WP_000011993.1;Parent=gene-AB11_RS12850;Dbxref=GenBank:WP_000011993.1;Name=WP_000011993.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AB11_RS12850;product=carbohydrate kinase family protein;protein_id=WP_000011993.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 108689 109435 . - . ID=gene-AB11_RS12855;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AB11_RS12855;old_locus_tag=AB11_2308 NZ_JHDH01000127.1 Protein Homology CDS 108689 109435 . - 0 ID=cds-WP_000434038.1;Parent=gene-AB11_RS12855;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AB11_RS12855;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 109487 110305 . - . ID=gene-AB11_RS12860;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=AB11_RS12860;old_locus_tag=AB11_2309 NZ_JHDH01000127.1 Protein Homology CDS 109487 110305 . - 0 ID=cds-WP_032223538.1;Parent=gene-AB11_RS12860;Dbxref=GenBank:WP_032223538.1;Name=WP_032223538.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AB11_RS12860;product=glycoside hydrolase family 25 protein;protein_id=WP_032223538.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 110370 111170 . - . ID=gene-AB11_RS12865;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AB11_RS12865;old_locus_tag=AB11_2310 NZ_JHDH01000127.1 Protein Homology CDS 110370 111170 . - 0 ID=cds-WP_000822274.1;Parent=gene-AB11_RS12865;Dbxref=GenBank:WP_000822274.1;Name=WP_000822274.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AB11_RS12865;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 111167 111955 . - . ID=gene-AB11_RS12870;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AB11_RS12870;old_locus_tag=AB11_2311 NZ_JHDH01000127.1 Protein Homology CDS 111167 111955 . - 0 ID=cds-WP_001195564.1;Parent=gene-AB11_RS12870;Dbxref=GenBank:WP_001195564.1;Name=WP_001195564.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416607.1;locus_tag=AB11_RS12870;product=hydroxyethylthiazole kinase;protein_id=WP_001195564.1;transl_table=11 NZ_JHDH01000127.1 cmsearch riboswitch 111990 112086 . - . ID=id-NZ_JHDH01000127.1:111990..112086;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000127.1 RefSeq gene 112178 112450 . - . ID=gene-AB11_RS12875;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AB11_RS12875;old_locus_tag=AB11_2312 NZ_JHDH01000127.1 Protein Homology CDS 112178 112450 . - 0 ID=cds-WP_000019944.1;Parent=gene-AB11_RS12875;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AB11_RS12875;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 112571 113395 . + . ID=gene-AB11_RS12880;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AB11_RS12880;old_locus_tag=AB11_2313 NZ_JHDH01000127.1 Protein Homology CDS 112571 113395 . + 0 ID=cds-WP_000134632.1;Parent=gene-AB11_RS12880;Dbxref=GenBank:WP_000134632.1;Name=WP_000134632.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AB11_RS12880;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134632.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 113614 113952 . + . ID=gene-AB11_RS12885;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AB11_RS12885;old_locus_tag=AB11_2314 NZ_JHDH01000127.1 Protein Homology CDS 113614 113952 . + 0 ID=cds-WP_000153074.1;Parent=gene-AB11_RS12885;Dbxref=GenBank:WP_000153074.1;Name=WP_000153074.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707992.1;locus_tag=AB11_RS12885;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153074.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 114034 115068 . - . ID=gene-AB11_RS12890;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AB11_RS12890;old_locus_tag=AB11_2315 NZ_JHDH01000127.1 Protein Homology CDS 114034 115068 . - 0 ID=cds-WP_000405695.1;Parent=gene-AB11_RS12890;Dbxref=GenBank:WP_000405695.1;Name=WP_000405695.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AB11_RS12890;product=putative fimbrial-like adhesin protein;protein_id=WP_000405695.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 115084 117564 . - . ID=gene-AB11_RS12895;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AB11_RS12895;old_locus_tag=AB11_2316 NZ_JHDH01000127.1 Protein Homology CDS 115084 117564 . - 0 ID=cds-WP_000945452.1;Parent=gene-AB11_RS12895;Dbxref=GenBank:WP_000945452.1;Name=WP_000945452.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AB11_RS12895;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945452.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 117580 118254 . - . ID=gene-AB11_RS12900;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AB11_RS12900;old_locus_tag=AB11_2317 NZ_JHDH01000127.1 Protein Homology CDS 117580 118254 . - 0 ID=cds-WP_000677393.1;Parent=gene-AB11_RS12900;Dbxref=GenBank:WP_000677393.1;Name=WP_000677393.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AB11_RS12900;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677393.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 118334 118876 . - . ID=gene-AB11_RS12905;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AB11_RS12905;old_locus_tag=AB11_2318 NZ_JHDH01000127.1 Protein Homology CDS 118334 118876 . - 0 ID=cds-WP_000830456.1;Parent=gene-AB11_RS12905;Dbxref=GenBank:WP_000830456.1;Name=WP_000830456.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416614.1;locus_tag=AB11_RS12905;product=fimbrial protein;protein_id=WP_000830456.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 119169 119450 . - . ID=gene-AB11_RS12910;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AB11_RS12910 NZ_JHDH01000127.1 Protein Homology CDS 119169 119450 . - 0 ID=cds-WP_032223542.1;Parent=gene-AB11_RS12910;Dbxref=GenBank:WP_032223542.1;Name=WP_032223542.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416615.1;locus_tag=AB11_RS12910;product=YehE family protein;protein_id=WP_032223542.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 119713 120822 . - . ID=gene-AB11_RS12915;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AB11_RS12915;old_locus_tag=AB11_2320 NZ_JHDH01000127.1 Protein Homology CDS 119713 120822 . - 0 ID=cds-WP_001005448.1;Parent=gene-AB11_RS12915;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AB11_RS12915;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 120954 122987 . + . ID=gene-AB11_RS12920;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AB11_RS12920;old_locus_tag=AB11_2321 NZ_JHDH01000127.1 Protein Homology CDS 120954 122987 . + 0 ID=cds-WP_001397492.1;Parent=gene-AB11_RS12920;Dbxref=GenBank:WP_001397492.1;Name=WP_001397492.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416617.1;locus_tag=AB11_RS12920;product=methionine--tRNA ligase;protein_id=WP_001397492.1;transl_table=11 NZ_JHDH01000127.1 RefSeq pseudogene 123128 126922 . + . ID=gene-AB11_RS12925;Name=AB11_RS12925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12925;old_locus_tag=AB11_2323;pseudo=true NZ_JHDH01000127.1 Protein Homology CDS 123128 126922 . + 0 ID=cds-AB11_RS12925;Parent=gene-AB11_RS12925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AB11_RS12925;product=DUF4132 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 126932 130564 . + . ID=gene-AB11_RS12930;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=protein_coding;locus_tag=AB11_RS12930;old_locus_tag=AB11_2324 NZ_JHDH01000127.1 Protein Homology CDS 126932 130564 . + 0 ID=cds-WP_021570887.1;Parent=gene-AB11_RS12930;Dbxref=GenBank:WP_021570887.1;Name=WP_021570887.1;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AB11_RS12930;product=DUF4132 domain-containing protein YehI;protein_id=WP_021570887.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 130625 130942 . + . ID=gene-AB11_RS12935;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AB11_RS12935 NZ_JHDH01000127.1 Protein Homology CDS 130625 130942 . + 0 ID=cds-WP_000636925.1;Parent=gene-AB11_RS12935;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AB11_RS12935;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 131249 132337 . + . ID=gene-AB11_RS12940;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AB11_RS12940;old_locus_tag=AB11_2325 NZ_JHDH01000127.1 Protein Homology CDS 131249 132337 . + 0 ID=cds-WP_001300974.1;Parent=gene-AB11_RS12940;Dbxref=GenBank:WP_001300974.1;Name=WP_001300974.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416623.2;locus_tag=AB11_RS12940;product=ATP-binding protein;protein_id=WP_001300974.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 132348 134627 . + . ID=gene-AB11_RS12945;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AB11_RS12945;old_locus_tag=AB11_2326 NZ_JHDH01000127.1 Protein Homology CDS 132348 134627 . + 0 ID=cds-WP_032223546.1;Parent=gene-AB11_RS12945;Dbxref=GenBank:WP_032223546.1;Name=WP_032223546.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AB11_RS12945;product=DUF5682 family protein;protein_id=WP_032223546.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 134620 135756 . + . ID=gene-AB11_RS12950;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AB11_RS12950;old_locus_tag=AB11_2327 NZ_JHDH01000127.1 Protein Homology CDS 134620 135756 . + 0 ID=cds-WP_001333512.1;Parent=gene-AB11_RS12950;Dbxref=GenBank:WP_001333512.1;Name=WP_001333512.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AB11_RS12950;product=vWA domain-containing protein;protein_id=WP_001333512.1;transl_table=11 NZ_JHDH01000127.1 RefSeq gene 135753 137753 . + . ID=gene-AB11_RS12955;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AB11_RS12955;old_locus_tag=AB11_2328 NZ_JHDH01000127.1 Protein Homology CDS 135753 137753 . + 0 ID=cds-WP_001423058.1;Parent=gene-AB11_RS12955;Dbxref=GenBank:WP_001423058.1;Name=WP_001423058.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AB11_RS12955;product=SWIM zinc finger family protein;protein_id=WP_001423058.1;transl_table=11 NZ_JHDH01000127.1 RefSeq pseudogene 137833 138427 . + . ID=gene-AB11_RS12960;Name=AB11_RS12960;end_range=138427,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS12960;old_locus_tag=AB11_2329;partial=true;pseudo=true NZ_JHDH01000127.1 Protein Homology CDS 137833 138427 . + 0 ID=cds-AB11_RS12960;Parent=gene-AB11_RS12960;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=138427,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS12960;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000128.1 1 131728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000128.1 RefSeq region 1 131728 . + . ID=NZ_JHDH01000128.1:1..131728;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000128.1 RefSeq gene 51 748 . + . ID=gene-AB11_RS12965;Name=AB11_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS12965;old_locus_tag=AB11_2330 NZ_JHDH01000128.1 Protein Homology CDS 51 300 . + 0 ID=cds-WP_095033700.1-4;Parent=gene-AB11_RS12965;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS12965;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000128.1 Protein Homology CDS 300 748 . + 2 ID=cds-WP_095033700.1-4;Parent=gene-AB11_RS12965;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS12965;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 872 1333 . + . ID=gene-AB11_RS12970;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AB11_RS12970;old_locus_tag=AB11_2331 NZ_JHDH01000128.1 Protein Homology CDS 872 1333 . + 0 ID=cds-WP_001373589.1;Parent=gene-AB11_RS12970;Dbxref=GenBank:WP_001373589.1;Name=WP_001373589.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AB11_RS12970;product=YehR family lipoprotein;protein_id=WP_001373589.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 1374 1844 . - . ID=gene-AB11_RS12975;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AB11_RS12975;old_locus_tag=AB11_2332 NZ_JHDH01000128.1 Protein Homology CDS 1374 1844 . - 0 ID=cds-WP_001295430.1;Parent=gene-AB11_RS12975;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AB11_RS12975;product=YehS family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 1891 2610 . - . ID=gene-AB11_RS12980;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AB11_RS12980;old_locus_tag=AB11_2333 NZ_JHDH01000128.1 Protein Homology CDS 1891 2610 . - 0 ID=cds-WP_000598641.1;Parent=gene-AB11_RS12980;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AB11_RS12980;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 2607 4292 . - . ID=gene-AB11_RS12985;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AB11_RS12985;old_locus_tag=AB11_2334 NZ_JHDH01000128.1 Protein Homology CDS 2607 4292 . - 0 ID=cds-WP_001295431.1;Parent=gene-AB11_RS12985;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AB11_RS12985;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 4514 5302 . + . ID=gene-AB11_RS12990;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AB11_RS12990;old_locus_tag=AB11_2335 NZ_JHDH01000128.1 Protein Homology CDS 4514 5302 . + 0 ID=cds-WP_001742009.1;Parent=gene-AB11_RS12990;Dbxref=GenBank:WP_001742009.1;Name=WP_001742009.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: protein motif:HMM:NF011617.0;locus_tag=AB11_RS12990;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001742009.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 5313 5420 . + . ID=gene-AB11_RS12995;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AB11_RS12995 NZ_JHDH01000128.1 Protein Homology CDS 5313 5420 . + 0 ID=cds-WP_001216963.1;Parent=gene-AB11_RS12995;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AB11_RS12995;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 5401 6132 . - . ID=gene-AB11_RS13000;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AB11_RS13000;old_locus_tag=AB11_2336 NZ_JHDH01000128.1 Protein Homology CDS 5401 6132 . - 0 ID=cds-WP_000783120.1;Parent=gene-AB11_RS13000;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AB11_RS13000;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 6137 7063 . - . ID=gene-AB11_RS13005;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AB11_RS13005;old_locus_tag=AB11_2337 NZ_JHDH01000128.1 Protein Homology CDS 6137 7063 . - 0 ID=cds-WP_000569315.1;Parent=gene-AB11_RS13005;Dbxref=GenBank:WP_000569315.1;Name=WP_000569315.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416633.1;locus_tag=AB11_RS13005;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569315.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 7056 8213 . - . ID=gene-AB11_RS13010;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AB11_RS13010;old_locus_tag=AB11_2338 NZ_JHDH01000128.1 Protein Homology CDS 7056 8213 . - 0 ID=cds-WP_000220837.1;Parent=gene-AB11_RS13010;Dbxref=GenBank:WP_000220837.1;Name=WP_000220837.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AB11_RS13010;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000220837.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 8220 9137 . - . ID=gene-AB11_RS13015;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AB11_RS13015;old_locus_tag=AB11_2339 NZ_JHDH01000128.1 Protein Homology CDS 8220 9137 . - 0 ID=cds-WP_001130308.1;Parent=gene-AB11_RS13015;Dbxref=GenBank:WP_001130308.1;Name=WP_001130308.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AB11_RS13015;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130308.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 9348 11645 . - . ID=gene-AB11_RS13020;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AB11_RS13020;old_locus_tag=AB11_2340 NZ_JHDH01000128.1 Protein Homology CDS 9348 11645 . - 0 ID=cds-WP_000871504.1;Parent=gene-AB11_RS13020;Dbxref=GenBank:WP_000871504.1;Name=WP_000871504.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AB11_RS13020;product=beta-glucosidase BglX;protein_id=WP_000871504.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 11841 13556 . + . ID=gene-AB11_RS13025;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AB11_RS13025;old_locus_tag=AB11_2342 NZ_JHDH01000128.1 Protein Homology CDS 11841 13556 . + 0 ID=cds-WP_000097403.1;Parent=gene-AB11_RS13025;Dbxref=GenBank:WP_000097403.1;Name=WP_000097403.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416637.1;locus_tag=AB11_RS13025;product=D-lactate dehydrogenase;protein_id=WP_000097403.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 13594 14526 . - . ID=gene-AB11_RS13030;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AB11_RS13030;old_locus_tag=AB11_2343 NZ_JHDH01000128.1 Protein Homology CDS 13594 14526 . - 0 ID=cds-WP_001319943.1;Parent=gene-AB11_RS13030;Dbxref=GenBank:WP_001319943.1;Name=WP_001319943.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=AB11_RS13030;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001319943.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 14700 15287 . - . ID=gene-AB11_RS13035;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AB11_RS13035;old_locus_tag=AB11_2344 NZ_JHDH01000128.1 Protein Homology CDS 14700 15287 . - 0 ID=cds-WP_001295454.1;Parent=gene-AB11_RS13035;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AB11_RS13035;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 15457 16035 . + . ID=gene-AB11_RS13040;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AB11_RS13040;old_locus_tag=AB11_2345 NZ_JHDH01000128.1 Protein Homology CDS 15457 16035 . + 0 ID=cds-WP_001296821.1;Parent=gene-AB11_RS13040;Dbxref=GenBank:WP_001296821.1;Name=WP_001296821.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AB11_RS13040;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 16165 16926 . - . ID=gene-AB11_RS13045;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AB11_RS13045;old_locus_tag=AB11_2347 NZ_JHDH01000128.1 Protein Homology CDS 16165 16926 . - 0 ID=cds-WP_000079538.1;Parent=gene-AB11_RS13045;Dbxref=GenBank:WP_000079538.1;Name=WP_000079538.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416641.1;locus_tag=AB11_RS13045;product=SDR family oxidoreductase;protein_id=WP_000079538.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 16979 18415 . - . ID=gene-AB11_RS13050;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AB11_RS13050;old_locus_tag=AB11_2348 NZ_JHDH01000128.1 Protein Homology CDS 16979 18415 . - 0 ID=cds-WP_001078139.1;Parent=gene-AB11_RS13050;Dbxref=GenBank:WP_001078139.1;Name=WP_001078139.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AB11_RS13050;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078139.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 18639 18722 . + . ID=gene-AB11_RS13055;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AB11_RS13055 NZ_JHDH01000128.1 Protein Homology CDS 18639 18722 . + 0 ID=cds-WP_000691708.1;Parent=gene-AB11_RS13055;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AB11_RS13055;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 19095 20042 . - . ID=gene-AB11_RS13060;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AB11_RS13060;old_locus_tag=AB11_2349 NZ_JHDH01000128.1 Protein Homology CDS 19095 20042 . - 0 ID=cds-WP_001264861.1;Parent=gene-AB11_RS13060;Dbxref=GenBank:WP_001264861.1;Name=WP_001264861.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AB11_RS13060;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264861.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 20281 20679 . + . ID=gene-AB11_RS13065;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AB11_RS13065;old_locus_tag=AB11_2350 NZ_JHDH01000128.1 Protein Homology CDS 20281 20679 . + 0 ID=cds-WP_001295452.1;Parent=gene-AB11_RS13065;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AB11_RS13065;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 20676 21371 . + . ID=gene-AB11_RS13070;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AB11_RS13070;old_locus_tag=AB11_2351 NZ_JHDH01000128.1 Protein Homology CDS 20676 21371 . + 0 ID=cds-WP_000968208.1;Parent=gene-AB11_RS13070;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AB11_RS13070;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 21501 22385 . + . ID=gene-AB11_RS13075;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AB11_RS13075;old_locus_tag=AB11_2352 NZ_JHDH01000128.1 Protein Homology CDS 21501 22385 . + 0 ID=cds-WP_000553555.1;Parent=gene-AB11_RS13075;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AB11_RS13075;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 22535 23254 . + . ID=gene-AB11_RS13080;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AB11_RS13080;old_locus_tag=AB11_2353 NZ_JHDH01000128.1 Protein Homology CDS 22535 23254 . + 0 ID=cds-WP_000920064.1;Parent=gene-AB11_RS13080;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AB11_RS13080;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 23257 23496 . + . ID=gene-AB11_RS13085;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AB11_RS13085;old_locus_tag=AB11_2354 NZ_JHDH01000128.1 Protein Homology CDS 23257 23496 . + 0 ID=cds-WP_000383096.1;Parent=gene-AB11_RS13085;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AB11_RS13085;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 23690 24928 . + . ID=gene-AB11_RS13090;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AB11_RS13090;old_locus_tag=AB11_2355 NZ_JHDH01000128.1 Protein Homology CDS 23690 24928 . + 0 ID=cds-WP_001136389.1;Parent=gene-AB11_RS13090;Dbxref=GenBank:WP_001136389.1;Name=WP_001136389.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AB11_RS13090;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136389.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 24922 26157 . + . ID=gene-AB11_RS13095;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AB11_RS13095;old_locus_tag=AB11_2356 NZ_JHDH01000128.1 Protein Homology CDS 24922 26157 . + 0 ID=cds-WP_021570890.1;Parent=gene-AB11_RS13095;Dbxref=GenBank:WP_021570890.1;Name=WP_021570890.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AB11_RS13095;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_021570890.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 26400 27410 . - . ID=gene-AB11_RS13100;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AB11_RS13100;old_locus_tag=AB11_2358 NZ_JHDH01000128.1 Protein Homology CDS 26400 27410 . - 0 ID=cds-WP_001275118.1;Parent=gene-AB11_RS13100;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AB11_RS13100;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 27426 28946 . - . ID=gene-AB11_RS13105;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AB11_RS13105;old_locus_tag=AB11_2359 NZ_JHDH01000128.1 Protein Homology CDS 27426 28946 . - 0 ID=cds-WP_032223554.1;Parent=gene-AB11_RS13105;Dbxref=GenBank:WP_032223554.1;Name=WP_032223554.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AB11_RS13105;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_032223554.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 29007 30005 . - . ID=gene-AB11_RS13110;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AB11_RS13110;old_locus_tag=AB11_2360 NZ_JHDH01000128.1 Protein Homology CDS 29007 30005 . - 0 ID=cds-WP_001036964.1;Parent=gene-AB11_RS13110;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AB11_RS13110;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 30285 31325 . - . ID=gene-AB11_RS13115;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AB11_RS13115;old_locus_tag=AB11_2361 NZ_JHDH01000128.1 Protein Homology CDS 30285 31325 . - 0 ID=cds-WP_000628648.1;Parent=gene-AB11_RS13115;Dbxref=GenBank:WP_000628648.1;Name=WP_000628648.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416656.1;locus_tag=AB11_RS13115;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628648.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 31467 32624 . - . ID=gene-AB11_RS13120;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AB11_RS13120;old_locus_tag=AB11_2362 NZ_JHDH01000128.1 Protein Homology CDS 31467 32624 . - 0 ID=cds-WP_000440926.1;Parent=gene-AB11_RS13120;Dbxref=GenBank:WP_000440926.1;Name=WP_000440926.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AB11_RS13120;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440926.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 32641 33309 . - . ID=gene-AB11_RS13125;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AB11_RS13125;old_locus_tag=AB11_2363 NZ_JHDH01000128.1 Protein Homology CDS 32641 33309 . - 0 ID=cds-WP_001139613.1;Parent=gene-AB11_RS13125;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AB11_RS13125;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 33567 34403 . + . ID=gene-AB11_RS13130;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AB11_RS13130;old_locus_tag=AB11_2364 NZ_JHDH01000128.1 Protein Homology CDS 33567 34403 . + 0 ID=cds-WP_000425438.1;Parent=gene-AB11_RS13130;Dbxref=GenBank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AB11_RS13130;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 34435 36426 . - . ID=gene-AB11_RS13135;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AB11_RS13135;old_locus_tag=AB11_2365 NZ_JHDH01000128.1 Protein Homology CDS 34435 36426 . - 0 ID=cds-WP_000489247.1;Parent=gene-AB11_RS13135;Dbxref=GenBank:WP_000489247.1;Name=WP_000489247.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AB11_RS13135;product=catecholate siderophore receptor CirA;protein_id=WP_000489247.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 36720 38189 . - . ID=gene-AB11_RS13140;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AB11_RS13140;old_locus_tag=AB11_2366 NZ_JHDH01000128.1 Protein Homology CDS 36720 38189 . - 0 ID=cds-WP_000253273.1;Parent=gene-AB11_RS13140;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AB11_RS13140;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 38394 39275 . - . ID=gene-AB11_RS13145;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB11_RS13145;old_locus_tag=AB11_2368 NZ_JHDH01000128.1 Protein Homology CDS 38394 39275 . - 0 ID=cds-WP_000548294.1;Parent=gene-AB11_RS13145;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AB11_RS13145;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 39374 40423 . + . ID=gene-AB11_RS13150;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AB11_RS13150;old_locus_tag=AB11_2369 NZ_JHDH01000128.1 Protein Homology CDS 39374 40423 . + 0 ID=cds-WP_000182053.1;Parent=gene-AB11_RS13150;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AB11_RS13150;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 40497 41354 . + . ID=gene-AB11_RS13155;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AB11_RS13155;old_locus_tag=AB11_2370 NZ_JHDH01000128.1 Protein Homology CDS 40497 41354 . + 0 ID=cds-WP_000873894.1;Parent=gene-AB11_RS13155;Dbxref=GenBank:WP_000873894.1;Name=WP_000873894.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AB11_RS13155;product=deoxyribonuclease IV;protein_id=WP_000873894.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 41357 42445 . + . ID=gene-AB11_RS13160;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AB11_RS13160;old_locus_tag=AB11_2371 NZ_JHDH01000128.1 Protein Homology CDS 41357 42445 . + 0 ID=cds-WP_001065016.1;Parent=gene-AB11_RS13160;Dbxref=GenBank:WP_001065016.1;Name=WP_001065016.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416665.1;locus_tag=AB11_RS13160;product=sugar kinase;protein_id=WP_001065016.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 42552 43802 . - . ID=gene-AB11_RS13165;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AB11_RS13165;old_locus_tag=AB11_2372 NZ_JHDH01000128.1 Protein Homology CDS 42552 43802 . - 0 ID=cds-WP_024170621.1;Parent=gene-AB11_RS13165;Dbxref=GenBank:WP_024170621.1;Name=WP_024170621.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AB11_RS13165;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_024170621.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 43902 44843 . - . ID=gene-AB11_RS13170;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AB11_RS13170;old_locus_tag=AB11_2373 NZ_JHDH01000128.1 Protein Homology CDS 43902 44843 . - 0 ID=cds-WP_000415429.1;Parent=gene-AB11_RS13170;Dbxref=GenBank:WP_000415429.1;Name=WP_000415429.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AB11_RS13170;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415429.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 44973 45671 . + . ID=gene-AB11_RS13175;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AB11_RS13175;old_locus_tag=AB11_2374 NZ_JHDH01000128.1 Protein Homology CDS 44973 45671 . + 0 ID=cds-WP_000658575.1;Parent=gene-AB11_RS13175;Dbxref=GenBank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AB11_RS13175;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 45742 46992 . - . ID=gene-AB11_RS13180;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AB11_RS13180;old_locus_tag=AB11_2375 NZ_JHDH01000128.1 Protein Homology CDS 45742 46992 . - 0 ID=cds-WP_000353878.1;Parent=gene-AB11_RS13180;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AB11_RS13180;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 47086 48024 . - . ID=gene-AB11_RS13185;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AB11_RS13185;old_locus_tag=AB11_2376 NZ_JHDH01000128.1 Protein Homology CDS 47086 48024 . - 0 ID=cds-WP_001292454.1;Parent=gene-AB11_RS13185;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AB11_RS13185;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 48012 48953 . - . ID=gene-AB11_RS13190;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AB11_RS13190;old_locus_tag=AB11_2377 NZ_JHDH01000128.1 Protein Homology CDS 48012 48953 . - 0 ID=cds-WP_032223558.1;Parent=gene-AB11_RS13190;Dbxref=GenBank:WP_032223558.1;Name=WP_032223558.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416671.1;locus_tag=AB11_RS13190;product=pseudouridine kinase;protein_id=WP_032223558.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 49376 51067 . - . ID=gene-AB11_RS13195;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AB11_RS13195;old_locus_tag=AB11_2378 NZ_JHDH01000128.1 Protein Homology CDS 49376 51067 . - 0 ID=cds-WP_032176451.1;Parent=gene-AB11_RS13195;Dbxref=GenBank:WP_032176451.1;Name=WP_032176451.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416672.1;locus_tag=AB11_RS13195;product=PTS fructose transporter subunit IIBC;protein_id=WP_032176451.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 51084 52022 . - . ID=gene-AB11_RS13200;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AB11_RS13200;old_locus_tag=AB11_2379 NZ_JHDH01000128.1 Protein Homology CDS 51084 52022 . - 0 ID=cds-WP_000091263.1;Parent=gene-AB11_RS13200;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AB11_RS13200;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 52022 53152 . - . ID=gene-AB11_RS13205;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AB11_RS13205;old_locus_tag=AB11_2380 NZ_JHDH01000128.1 Protein Homology CDS 52022 53152 . - 0 ID=cds-WP_000487246.1;Parent=gene-AB11_RS13205;Dbxref=GenBank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AB11_RS13205;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 53520 54701 . + . ID=gene-AB11_RS13210;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AB11_RS13210;old_locus_tag=AB11_2382 NZ_JHDH01000128.1 Protein Homology CDS 53520 54701 . + 0 ID=cds-WP_000551969.1;Parent=gene-AB11_RS13210;Dbxref=GenBank:WP_000551969.1;Name=WP_000551969.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AB11_RS13210;product=sugar efflux transporter SetB;protein_id=WP_000551969.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 54698 54952 . - . ID=gene-AB11_RS13215;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AB11_RS13215;old_locus_tag=AB11_2383 NZ_JHDH01000128.1 Protein Homology CDS 54698 54952 . - 0 ID=cds-WP_000389030.1;Parent=gene-AB11_RS13215;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;gene=yeiW;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AB11_RS13215;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 55107 55679 . + . ID=gene-AB11_RS13220;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AB11_RS13220;old_locus_tag=AB11_2385 NZ_JHDH01000128.1 Protein Homology CDS 55107 55679 . + 0 ID=cds-WP_001136827.1;Parent=gene-AB11_RS13220;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AB11_RS13220;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 55902 57368 . + . ID=gene-AB11_RS13225;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AB11_RS13225;old_locus_tag=AB11_2386 NZ_JHDH01000128.1 Protein Homology CDS 55902 57368 . + 0 ID=cds-WP_001491191.1;Parent=gene-AB11_RS13225;Dbxref=GenBank:WP_001491191.1;Name=WP_001491191.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AB11_RS13225;product=mannitol dehydrogenase family protein;protein_id=WP_001491191.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 57486 58472 . + . ID=gene-AB11_RS13230;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AB11_RS13230;old_locus_tag=AB11_2387 NZ_JHDH01000128.1 Protein Homology CDS 57486 58472 . + 0 ID=cds-WP_000198822.1;Parent=gene-AB11_RS13230;Dbxref=GenBank:WP_000198822.1;Name=WP_000198822.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708072.1;locus_tag=AB11_RS13230;product=zinc-binding GTPase YeiR;protein_id=WP_000198822.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 58511 59224 . + . ID=gene-AB11_RS13235;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AB11_RS13235;old_locus_tag=AB11_2388 NZ_JHDH01000128.1 Protein Homology CDS 58511 59224 . + 0 ID=cds-WP_001300998.1;Parent=gene-AB11_RS13235;Dbxref=GenBank:WP_001300998.1;Name=WP_001300998.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AB11_RS13235;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_001300998.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 59636 60202 . + . ID=gene-AB11_RS13240;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AB11_RS13240;old_locus_tag=AB11_2389 NZ_JHDH01000128.1 Protein Homology CDS 59636 60202 . + 0 ID=cds-WP_000241011.1;Parent=gene-AB11_RS13240;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AB11_RS13240;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 60383 61939 . + . ID=gene-AB11_RS13245;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AB11_RS13245;old_locus_tag=AB11_2390 NZ_JHDH01000128.1 Protein Homology CDS 60383 61939 . + 0 ID=cds-WP_000470560.1;Parent=gene-AB11_RS13245;Dbxref=GenBank:WP_000470560.1;Name=WP_000470560.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AB11_RS13245;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470560.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 62021 63835 . + . ID=gene-AB11_RS13250;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AB11_RS13250;old_locus_tag=AB11_2391 NZ_JHDH01000128.1 Protein Homology CDS 62021 63835 . + 0 ID=cds-WP_000637034.1;Parent=gene-AB11_RS13250;Dbxref=GenBank:WP_000637034.1;Name=WP_000637034.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AB11_RS13250;product=extracellular solute-binding protein;protein_id=WP_000637034.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 63836 64930 . + . ID=gene-AB11_RS13255;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AB11_RS13255;old_locus_tag=AB11_2392 NZ_JHDH01000128.1 Protein Homology CDS 63836 64930 . + 0 ID=cds-WP_000501604.1;Parent=gene-AB11_RS13255;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AB11_RS13255;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 64930 65955 . + . ID=gene-AB11_RS13260;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AB11_RS13260;old_locus_tag=AB11_2393 NZ_JHDH01000128.1 Protein Homology CDS 64930 65955 . + 0 ID=cds-WP_000088916.1;Parent=gene-AB11_RS13260;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AB11_RS13260;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 65957 67546 . + . ID=gene-AB11_RS13265;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AB11_RS13265;old_locus_tag=AB11_2394 NZ_JHDH01000128.1 Protein Homology CDS 65957 67546 . + 0 ID=cds-WP_032223564.1;Parent=gene-AB11_RS13265;Dbxref=GenBank:WP_032223564.1;Name=WP_032223564.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AB11_RS13265;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_032223564.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 67550 67894 . - . ID=gene-AB11_RS13270;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AB11_RS13270;old_locus_tag=AB11_2395 NZ_JHDH01000128.1 Protein Homology CDS 67550 67894 . - 0 ID=cds-WP_000202798.1;Parent=gene-AB11_RS13270;Dbxref=GenBank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AB11_RS13270;product=YejG family protein;protein_id=WP_000202798.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 68227 69417 . - . ID=gene-AB11_RS13275;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AB11_RS13275;old_locus_tag=AB11_2396 NZ_JHDH01000128.1 Protein Homology CDS 68227 69417 . - 0 ID=cds-WP_000213361.1;Parent=gene-AB11_RS13275;Dbxref=GenBank:WP_000213361.1;Name=WP_000213361.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=AB11_RS13275;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213361.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 69445 70140 . - . ID=gene-AB11_RS13280;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AB11_RS13280;old_locus_tag=AB11_2397 NZ_JHDH01000128.1 Protein Homology CDS 69445 70140 . - 0 ID=cds-WP_001234850.1;Parent=gene-AB11_RS13280;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AB11_RS13280;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 70289 72049 . + . ID=gene-AB11_RS13285;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AB11_RS13285;old_locus_tag=AB11_2398 NZ_JHDH01000128.1 Protein Homology CDS 70289 72049 . + 0 ID=cds-WP_000578061.1;Parent=gene-AB11_RS13285;Dbxref=GenBank:WP_000578061.1;Name=WP_000578061.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=AB11_RS13285;product=DEAD/DEAH box helicase;protein_id=WP_000578061.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 72174 72458 . + . ID=gene-AB11_RS13290;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AB11_RS13290;old_locus_tag=AB11_2399 NZ_JHDH01000128.1 Protein Homology CDS 72174 72458 . + 0 ID=cds-WP_000494183.1;Parent=gene-AB11_RS13290;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AB11_RS13290;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 72597 73604 . - . ID=gene-AB11_RS13295;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AB11_RS13295;old_locus_tag=AB11_2400 NZ_JHDH01000128.1 Protein Homology CDS 72597 73604 . - 0 ID=cds-WP_000050793.1;Parent=gene-AB11_RS13295;Dbxref=GenBank:WP_000050793.1;Name=WP_000050793.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416691.1;locus_tag=AB11_RS13295;product=nucleoid-associated protein YejK;protein_id=WP_000050793.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 73786 74013 . + . ID=gene-AB11_RS13300;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AB11_RS13300;old_locus_tag=AB11_2402 NZ_JHDH01000128.1 Protein Homology CDS 73786 74013 . + 0 ID=cds-WP_001135667.1;Parent=gene-AB11_RS13300;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AB11_RS13300;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 74033 75793 . + . ID=gene-AB11_RS13305;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AB11_RS13305;old_locus_tag=AB11_2403 NZ_JHDH01000128.1 Protein Homology CDS 74033 75793 . + 0 ID=cds-WP_032223565.1;Parent=gene-AB11_RS13305;Dbxref=GenBank:WP_032223565.1;Name=WP_032223565.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AB11_RS13305;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_032223565.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 75868 75944 . + . ID=gene-AB11_RS13310;Name=AB11_RS13310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS13310;old_locus_tag=AB11_2404 NZ_JHDH01000128.1 tRNAscan-SE tRNA 75868 75944 . + . ID=rna-AB11_RS13310;Parent=gene-AB11_RS13310;anticodon=(pos:75902..75904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS13310;product=tRNA-Pro NZ_JHDH01000128.1 tRNAscan-SE exon 75868 75944 . + . ID=exon-AB11_RS13310-1;Parent=rna-AB11_RS13310;anticodon=(pos:75902..75904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS13310;product=tRNA-Pro NZ_JHDH01000128.1 RefSeq pseudogene 76047 78637 . - . ID=gene-AB11_RS13315;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=pseudogene;locus_tag=AB11_RS13315;old_locus_tag=AB11_2405;pseudo=true NZ_JHDH01000128.1 Protein Homology CDS 76047 78637 . - 0 ID=cds-AB11_RS13315;Parent=gene-AB11_RS13315;Note=frameshifted;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AB11_RS13315;product=autotransporter YejO;pseudo=true;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 78957 79604 . + . ID=gene-AB11_RS13320;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AB11_RS13320;old_locus_tag=AB11_2407 NZ_JHDH01000128.1 Protein Homology CDS 78957 79604 . + 0 ID=cds-WP_001113637.1;Parent=gene-AB11_RS13320;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AB11_RS13320;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 79815 80867 . - . ID=gene-AB11_RS13325;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AB11_RS13325;old_locus_tag=AB11_2408 NZ_JHDH01000128.1 Protein Homology CDS 79815 80867 . - 0 ID=cds-WP_032223568.1;Parent=gene-AB11_RS13325;Dbxref=GenBank:WP_032223568.1;Name=WP_032223568.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AB11_RS13325;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_032223568.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 80864 81421 . - . ID=gene-AB11_RS13330;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AB11_RS13330;old_locus_tag=AB11_2409 NZ_JHDH01000128.1 Protein Homology CDS 80864 81421 . - 0 ID=cds-WP_000824439.1;Parent=gene-AB11_RS13330;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AB11_RS13330;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 81418 83361 . - . ID=gene-AB11_RS13335;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AB11_RS13335;old_locus_tag=AB11_2410 NZ_JHDH01000128.1 Protein Homology CDS 81418 83361 . - 0 ID=cds-WP_000982447.1;Parent=gene-AB11_RS13335;Dbxref=GenBank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AB11_RS13335;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 83358 83837 . - . ID=gene-AB11_RS13340;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AB11_RS13340;old_locus_tag=AB11_2411 NZ_JHDH01000128.1 Protein Homology CDS 83358 83837 . - 0 ID=cds-WP_001026418.1;Parent=gene-AB11_RS13340;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AB11_RS13340;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 83834 84043 . - . ID=gene-AB11_RS13345;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AB11_RS13345;old_locus_tag=AB11_2412 NZ_JHDH01000128.1 Protein Homology CDS 83834 84043 . - 0 ID=cds-WP_000186540.1;Parent=gene-AB11_RS13345;Dbxref=GenBank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AB11_RS13345;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 84040 84777 . - . ID=gene-AB11_RS13350;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AB11_RS13350;old_locus_tag=AB11_2413 NZ_JHDH01000128.1 Protein Homology CDS 84040 84777 . - 0 ID=cds-WP_001295447.1;Parent=gene-AB11_RS13350;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AB11_RS13350;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 84819 85481 . - . ID=gene-AB11_RS13355;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AB11_RS13355;old_locus_tag=AB11_2414 NZ_JHDH01000128.1 Protein Homology CDS 84819 85481 . - 0 ID=cds-WP_000971730.1;Parent=gene-AB11_RS13355;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AB11_RS13355;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 85478 86101 . - . ID=gene-AB11_RS13360;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AB11_RS13360;old_locus_tag=AB11_2415 NZ_JHDH01000128.1 Protein Homology CDS 85478 86101 . - 0 ID=cds-WP_000525587.1;Parent=gene-AB11_RS13360;Dbxref=GenBank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AB11_RS13360;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 86114 86716 . - . ID=gene-AB11_RS13365;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AB11_RS13365;old_locus_tag=AB11_2416 NZ_JHDH01000128.1 Protein Homology CDS 86114 86716 . - 0 ID=cds-WP_000528376.1;Parent=gene-AB11_RS13365;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AB11_RS13365;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 86726 87175 . - . ID=gene-AB11_RS13370;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AB11_RS13370;old_locus_tag=AB11_2417 NZ_JHDH01000128.1 Protein Homology CDS 86726 87175 . - 0 ID=cds-WP_000835174.1;Parent=gene-AB11_RS13370;Dbxref=GenBank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AB11_RS13370;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 87172 88035 . - . ID=gene-AB11_RS13375;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AB11_RS13375;old_locus_tag=AB11_2418 NZ_JHDH01000128.1 Protein Homology CDS 87172 88035 . - 0 ID=cds-WP_000013515.1;Parent=gene-AB11_RS13375;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AB11_RS13375;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 88022 88717 . - . ID=gene-AB11_RS13380;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AB11_RS13380;old_locus_tag=AB11_2419 NZ_JHDH01000128.1 Protein Homology CDS 88022 88717 . - 0 ID=cds-WP_000091291.1;Parent=gene-AB11_RS13380;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AB11_RS13380;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 88724 91210 . - . ID=gene-AB11_RS13385;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AB11_RS13385;old_locus_tag=AB11_2420 NZ_JHDH01000128.1 Protein Homology CDS 88724 91210 . - 0 ID=cds-WP_001556134.1;Parent=gene-AB11_RS13385;Dbxref=GenBank:WP_001556134.1;Name=WP_001556134.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416710.1;locus_tag=AB11_RS13385;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_001556134.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 91207 91470 . - . ID=gene-AB11_RS13390;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AB11_RS13390;old_locus_tag=AB11_2421 NZ_JHDH01000128.1 Protein Homology CDS 91207 91470 . - 0 ID=cds-WP_000557378.1;Parent=gene-AB11_RS13390;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AB11_RS13390;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 91460 91954 . - . ID=gene-AB11_RS13395;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AB11_RS13395;old_locus_tag=AB11_2422 NZ_JHDH01000128.1 Protein Homology CDS 91460 91954 . - 0 ID=cds-WP_000686723.1;Parent=gene-AB11_RS13395;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AB11_RS13395;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 92063 92227 . + . ID=gene-AB11_RS25785;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AB11_RS25785;old_locus_tag=AB11_2423 NZ_JHDH01000128.1 Protein Homology CDS 92063 92227 . + 0 ID=cds-WP_001296837.1;Parent=gene-AB11_RS25785;Dbxref=GenBank:WP_001296837.1;Name=WP_001296837.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AB11_RS25785;product=protein YojO;protein_id=WP_001296837.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 92362 92850 . + . ID=gene-AB11_RS13405;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AB11_RS13405;old_locus_tag=AB11_2424 NZ_JHDH01000128.1 Protein Homology CDS 92362 92850 . + 0 ID=cds-WP_032221867.1;Parent=gene-AB11_RS13405;Dbxref=GenBank:WP_032221867.1;Name=WP_032221867.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416713.1;locus_tag=AB11_RS13405;product=serine protease inhibitor ecotin;protein_id=WP_032221867.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 93228 94874 . - . ID=gene-AB11_RS13410;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AB11_RS13410;old_locus_tag=AB11_2425 NZ_JHDH01000128.1 Protein Homology CDS 93228 94874 . - 0 ID=cds-WP_000758073.1;Parent=gene-AB11_RS13410;Dbxref=GenBank:WP_000758073.1;Name=WP_000758073.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AB11_RS13410;product=malate dehydrogenase (quinone);protein_id=WP_000758073.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 95092 96735 . - . ID=gene-AB11_RS13415;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AB11_RS13415;old_locus_tag=AB11_2426 NZ_JHDH01000128.1 Protein Homology CDS 95092 96735 . - 0 ID=cds-WP_000422188.1;Parent=gene-AB11_RS13415;Dbxref=GenBank:WP_000422188.1;Name=WP_000422188.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AB11_RS13415;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422188.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 96811 97461 . - . ID=gene-AB11_RS13420;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AB11_RS13420;old_locus_tag=AB11_2427 NZ_JHDH01000128.1 Protein Homology CDS 96811 97461 . - 0 ID=cds-WP_000885006.1;Parent=gene-AB11_RS13420;Dbxref=GenBank:WP_000885006.1;Name=WP_000885006.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AB11_RS13420;product=DNA oxidative demethylase AlkB;protein_id=WP_000885006.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 97461 98525 . - . ID=gene-AB11_RS13425;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AB11_RS13425;old_locus_tag=AB11_2428 NZ_JHDH01000128.1 Protein Homology CDS 97461 98525 . - 0 ID=cds-WP_000710372.1;Parent=gene-AB11_RS13425;Dbxref=GenBank:WP_000710372.1;Name=WP_000710372.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708108.1;locus_tag=AB11_RS13425;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000710372.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 98599 99654 . - . ID=gene-AB11_RS13430;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AB11_RS13430;old_locus_tag=AB11_2430 NZ_JHDH01000128.1 Protein Homology CDS 98599 99654 . - 0 ID=cds-WP_000406085.1;Parent=gene-AB11_RS13430;Dbxref=GenBank:WP_000406085.1;Name=WP_000406085.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708109.1;locus_tag=AB11_RS13430;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406085.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 99766 100896 . - . ID=gene-AB11_RS13435;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AB11_RS13435;old_locus_tag=AB11_2431 NZ_JHDH01000128.1 Protein Homology CDS 99766 100896 . - 0 ID=cds-WP_000865600.1;Parent=gene-AB11_RS13435;Dbxref=GenBank:WP_000865600.1;Name=WP_000865600.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AB11_RS13435;product=porin OmpC;protein_id=WP_000865600.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 101635 104307 . + . ID=gene-AB11_RS13440;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AB11_RS13440;old_locus_tag=AB11_2433 NZ_JHDH01000128.1 Protein Homology CDS 101635 104307 . + 0 ID=cds-WP_001249081.1;Parent=gene-AB11_RS13440;Dbxref=GenBank:WP_001249081.1;Name=WP_001249081.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416720.1;locus_tag=AB11_RS13440;product=phosphotransferase RcsD;protein_id=WP_001249081.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 104324 104974 . + . ID=gene-AB11_RS13445;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AB11_RS13445;old_locus_tag=AB11_2434 NZ_JHDH01000128.1 Protein Homology CDS 104324 104974 . + 0 ID=cds-WP_001061917.1;Parent=gene-AB11_RS13445;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AB11_RS13445;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 105174 108023 . - . ID=gene-AB11_RS13450;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AB11_RS13450;old_locus_tag=AB11_2435 NZ_JHDH01000128.1 Protein Homology CDS 105174 108023 . - 0 ID=cds-WP_000876011.1;Parent=gene-AB11_RS13450;Dbxref=GenBank:WP_000876011.1;Name=WP_000876011.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AB11_RS13450;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876011.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 108190 110016 . + . ID=gene-AB11_RS13455;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AB11_RS13455;old_locus_tag=AB11_2436 NZ_JHDH01000128.1 Protein Homology CDS 108190 110016 . + 0 ID=cds-WP_000559135.1;Parent=gene-AB11_RS13455;Dbxref=GenBank:WP_000559135.1;Name=WP_000559135.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AB11_RS13455;product=two-component system sensor histidine kinase AtoS;protein_id=WP_000559135.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 110013 111398 . + . ID=gene-AB11_RS13460;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AB11_RS13460;old_locus_tag=AB11_2437 NZ_JHDH01000128.1 Protein Homology CDS 110013 111398 . + 0 ID=cds-WP_000125290.1;Parent=gene-AB11_RS13460;Dbxref=GenBank:WP_000125290.1;Name=WP_000125290.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AB11_RS13460;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125290.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 111594 112256 . + . ID=gene-AB11_RS13465;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AB11_RS13465;old_locus_tag=AB11_2438 NZ_JHDH01000128.1 Protein Homology CDS 111594 112256 . + 0 ID=cds-WP_000850540.1;Parent=gene-AB11_RS13465;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AB11_RS13465;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 112256 112906 . + . ID=gene-AB11_RS13470;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AB11_RS13470;old_locus_tag=AB11_2439 NZ_JHDH01000128.1 Protein Homology CDS 112256 112906 . + 0 ID=cds-WP_000339065.1;Parent=gene-AB11_RS13470;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AB11_RS13470;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 112903 114225 . + . ID=gene-AB11_RS13475;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AB11_RS13475;old_locus_tag=AB11_2440 NZ_JHDH01000128.1 Protein Homology CDS 112903 114225 . + 0 ID=cds-WP_000580275.1;Parent=gene-AB11_RS13475;Dbxref=GenBank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AB11_RS13475;product=TIGR00366 family protein;protein_id=WP_000580275.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 114256 115440 . + . ID=gene-AB11_RS13480;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AB11_RS13480;old_locus_tag=AB11_2441 NZ_JHDH01000128.1 Protein Homology CDS 114256 115440 . + 0 ID=cds-WP_032223573.1;Parent=gene-AB11_RS13480;Dbxref=GenBank:WP_032223573.1;Name=WP_032223573.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AB11_RS13480;product=acetyl-CoA acetyltransferase;protein_id=WP_032223573.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 115514 116290 . - . ID=gene-AB11_RS13485;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AB11_RS13485;old_locus_tag=AB11_2442 NZ_JHDH01000128.1 Protein Homology CDS 115514 116290 . - 0 ID=cds-WP_001636418.1;Parent=gene-AB11_RS13485;Dbxref=GenBank:WP_001636418.1;Name=WP_001636418.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AB11_RS13485;product=YfaP family protein;protein_id=WP_001636418.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 116295 117944 . - . ID=gene-AB11_RS13490;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AB11_RS13490;old_locus_tag=AB11_2443 NZ_JHDH01000128.1 Protein Homology CDS 116295 117944 . - 0 ID=cds-WP_001104549.1;Parent=gene-AB11_RS13490;Dbxref=GenBank:WP_001104549.1;Name=WP_001104549.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AB11_RS13490;product=YfaQ family protein;protein_id=WP_001104549.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 117945 122459 . - . ID=gene-AB11_RS13495;Name=AB11_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13495;old_locus_tag=AB11_2444 NZ_JHDH01000128.1 Protein Homology CDS 117945 122459 . - 0 ID=cds-WP_024193420.1;Parent=gene-AB11_RS13495;Dbxref=GenBank:WP_024193420.1;Name=WP_024193420.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AB11_RS13495;product=alpha-2-macroglobulin family protein;protein_id=WP_024193420.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 122483 123106 . - . ID=gene-AB11_RS13500;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=AB11_RS13500;old_locus_tag=AB11_2445 NZ_JHDH01000128.1 Protein Homology CDS 122483 123106 . - 0 ID=cds-WP_001295211.1;Parent=gene-AB11_RS13500;Dbxref=GenBank:WP_001295211.1;Name=WP_001295211.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AB11_RS13500;product=DUF1175 domain-containing protein;protein_id=WP_001295211.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 123103 124791 . - . ID=gene-AB11_RS13505;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AB11_RS13505;old_locus_tag=AB11_2446 NZ_JHDH01000128.1 Protein Homology CDS 123103 124791 . - 0 ID=cds-WP_000012305.1;Parent=gene-AB11_RS13505;Dbxref=GenBank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AB11_RS13505;product=DUF2138 domain-containing protein;protein_id=WP_000012305.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 124940 127567 . - . ID=gene-AB11_RS13510;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AB11_RS13510;old_locus_tag=AB11_2447 NZ_JHDH01000128.1 Protein Homology CDS 124940 127567 . - 0 ID=cds-WP_001281242.1;Parent=gene-AB11_RS13510;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AB11_RS13510;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 127714 128436 . + . ID=gene-AB11_RS13515;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AB11_RS13515;old_locus_tag=AB11_2448 NZ_JHDH01000128.1 Protein Homology CDS 127714 128436 . + 0 ID=cds-WP_000990765.1;Parent=gene-AB11_RS13515;Dbxref=GenBank:WP_000990765.1;Name=WP_000990765.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AB11_RS13515;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990765.1;transl_table=11 NZ_JHDH01000128.1 RefSeq pseudogene 128564 130399 . - . ID=gene-AB11_RS13520;Name=AB11_RS13520;end_range=130399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13520;old_locus_tag=AB11_2449;partial=true;pseudo=true NZ_JHDH01000128.1 Protein Homology CDS 128564 130399 . - 0 ID=cds-AB11_RS13520;Parent=gene-AB11_RS13520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=130399,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AB11_RS13520;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000128.1 RefSeq gene 130570 131682 . - . ID=gene-AB11_RS13525;Name=AB11_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13525;old_locus_tag=AB11_2450 NZ_JHDH01000128.1 Protein Homology CDS 130570 131682 . - 0 ID=cds-WP_032222612.1-4;Parent=gene-AB11_RS13525;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS13525;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ##sequence-region NZ_JHDH01000129.1 1 42034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000129.1 RefSeq region 1 42034 . + . ID=NZ_JHDH01000129.1:1..42034;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000129.1 RefSeq gene 120 1232 . - . ID=gene-AB11_RS13530;Name=AB11_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13530;old_locus_tag=AB11_2451 NZ_JHDH01000129.1 Protein Homology CDS 120 1232 . - 0 ID=cds-WP_032222612.1-5;Parent=gene-AB11_RS13530;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS13530;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 NZ_JHDH01000129.1 RefSeq pseudogene 1287 3215 . - . ID=gene-AB11_RS13535;Name=AB11_RS13535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13535;old_locus_tag=AB11_2452;partial=true;pseudo=true;start_range=.,1287 NZ_JHDH01000129.1 Protein Homology CDS 1287 3215 . - 0 ID=cds-AB11_RS13535;Parent=gene-AB11_RS13535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AB11_RS13535;partial=true;product=autotransporter-associated beta strand repeat-containing protein;pseudo=true;start_range=.,1287;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 3640 3783 . - . ID=gene-AB11_RS25790;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AB11_RS25790;old_locus_tag=AB11_2453 NZ_JHDH01000129.1 Protein Homology CDS 3640 3783 . - 0 ID=cds-WP_269218350.1;Parent=gene-AB11_RS25790;Dbxref=GenBank:WP_269218350.1;Name=WP_269218350.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AB11_RS25790;product=protein YpaB;protein_id=WP_269218350.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 3911 6196 . + . ID=gene-AB11_RS13540;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AB11_RS13540;old_locus_tag=AB11_2454 NZ_JHDH01000129.1 Protein Homology CDS 3911 6196 . + 0 ID=cds-WP_001075164.1;Parent=gene-AB11_RS13540;Dbxref=GenBank:WP_001075164.1;Name=WP_001075164.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AB11_RS13540;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 6430 7560 . + . ID=gene-AB11_RS13545;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AB11_RS13545;old_locus_tag=AB11_2455 NZ_JHDH01000129.1 Protein Homology CDS 6430 7560 . + 0 ID=cds-WP_000332037.1;Parent=gene-AB11_RS13545;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AB11_RS13545;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 7560 7814 . + . ID=gene-AB11_RS13550;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AB11_RS13550;old_locus_tag=AB11_2456 NZ_JHDH01000129.1 Protein Homology CDS 7560 7814 . + 0 ID=cds-WP_000135040.1;Parent=gene-AB11_RS13550;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AB11_RS13550;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 7868 8518 . - . ID=gene-AB11_RS13555;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AB11_RS13555;old_locus_tag=AB11_2457 NZ_JHDH01000129.1 Protein Homology CDS 7868 8518 . - 0 ID=cds-WP_001405456.1;Parent=gene-AB11_RS13555;Dbxref=GenBank:WP_001405456.1;Name=WP_001405456.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AB11_RS13555;product=lipopolysaccharide kinase InaA;protein_id=WP_001405456.1;transl_table=11 NZ_JHDH01000129.1 RefSeq pseudogene 8598 8702 . - . ID=gene-AB11_RS25595;Name=AB11_RS25595;end_range=8702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25595;partial=true;pseudo=true NZ_JHDH01000129.1 Protein Homology CDS 8598 8702 . - 0 ID=cds-AB11_RS25595;Parent=gene-AB11_RS25595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AB11_RS25595;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000129.1 RefSeq pseudogene 8697 8939 . + . ID=gene-AB11_RS13560;Name=AB11_RS13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13560;old_locus_tag=AB11_2458;partial=true;pseudo=true;start_range=.,8697 NZ_JHDH01000129.1 Protein Homology CDS 8697 8939 . + 0 ID=cds-AB11_RS13560;Parent=gene-AB11_RS13560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AB11_RS13560;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,8697;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 8981 10057 . - . ID=gene-AB11_RS13565;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AB11_RS13565;old_locus_tag=AB11_2459 NZ_JHDH01000129.1 Protein Homology CDS 8981 10057 . - 0 ID=cds-WP_032223582.1;Parent=gene-AB11_RS13565;Dbxref=GenBank:WP_032223582.1;Name=WP_032223582.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416742.1;locus_tag=AB11_RS13565;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032223582.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 10062 11420 . - . ID=gene-AB11_RS13570;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AB11_RS13570;old_locus_tag=AB11_2460 NZ_JHDH01000129.1 Protein Homology CDS 10062 11420 . - 0 ID=cds-WP_000948731.1;Parent=gene-AB11_RS13570;Dbxref=GenBank:WP_000948731.1;Name=WP_000948731.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AB11_RS13570;product=glycerol-3-phosphate transporter;protein_id=WP_000948731.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 11693 13321 . + . ID=gene-AB11_RS13575;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AB11_RS13575;old_locus_tag=AB11_2462 NZ_JHDH01000129.1 Protein Homology CDS 11693 13321 . + 0 ID=cds-WP_001512947.1;Parent=gene-AB11_RS13575;Dbxref=GenBank:WP_001512947.1;Name=WP_001512947.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AB11_RS13575;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_001512947.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 13311 14570 . + . ID=gene-AB11_RS13580;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AB11_RS13580;old_locus_tag=AB11_2463 NZ_JHDH01000129.1 Protein Homology CDS 13311 14570 . + 0 ID=cds-WP_032223585.1;Parent=gene-AB11_RS13580;Dbxref=GenBank:WP_032223585.1;Name=WP_032223585.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AB11_RS13580;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_032223585.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 14567 15757 . + . ID=gene-AB11_RS13585;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AB11_RS13585;old_locus_tag=AB11_2464 NZ_JHDH01000129.1 Protein Homology CDS 14567 15757 . + 0 ID=cds-WP_001000379.1;Parent=gene-AB11_RS13585;Dbxref=GenBank:WP_001000379.1;Name=WP_001000379.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AB11_RS13585;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000379.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 15950 16849 . + . ID=gene-AB11_RS13590;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AB11_RS13590;old_locus_tag=AB11_2466 NZ_JHDH01000129.1 Protein Homology CDS 15950 16849 . + 0 ID=cds-WP_000140569.1;Parent=gene-AB11_RS13590;Dbxref=GenBank:WP_000140569.1;Name=WP_000140569.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AB11_RS13590;product=ISNCY family transposase;protein_id=WP_000140569.1;transl_table=11 NZ_JHDH01000129.1 RefSeq pseudogene 16850 17047 . + . ID=gene-AB11_RS13595;Name=AB11_RS13595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13595;old_locus_tag=AB11_2467;partial=true;pseudo=true;start_range=.,16850 NZ_JHDH01000129.1 Protein Homology CDS 16850 17047 . + 0 ID=cds-AB11_RS13595;Parent=gene-AB11_RS13595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AB11_RS13595;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16850;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 17088 17891 . - . ID=gene-AB11_RS13600;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AB11_RS13600;old_locus_tag=AB11_2468 NZ_JHDH01000129.1 Protein Homology CDS 17088 17891 . - 0 ID=cds-WP_000992954.1;Parent=gene-AB11_RS13600;Dbxref=GenBank:WP_000992954.1;Name=WP_000992954.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AB11_RS13600;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 17909 19198 . - . ID=gene-AB11_RS13605;Name=yfaV;gbkey=Gene;gene=yfaV;gene_biotype=protein_coding;locus_tag=AB11_RS13605;old_locus_tag=AB11_2469 NZ_JHDH01000129.1 Protein Homology CDS 17909 19198 . - 0 ID=cds-WP_016242281.1;Parent=gene-AB11_RS13605;Dbxref=GenBank:WP_016242281.1;Name=WP_016242281.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfaV;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AB11_RS13605;product=MFS transporter;protein_id=WP_016242281.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 19255 20460 . - . ID=gene-AB11_RS13610;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AB11_RS13610;old_locus_tag=AB11_2470 NZ_JHDH01000129.1 Protein Homology CDS 19255 20460 . - 0 ID=cds-WP_001319848.1;Parent=gene-AB11_RS13610;Dbxref=GenBank:WP_001319848.1;Name=WP_001319848.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AB11_RS13610;product=L-rhamnonate dehydratase;protein_id=WP_001319848.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 20475 21257 . - . ID=gene-AB11_RS13615;Name=yfaX;gbkey=Gene;gene=yfaX;gene_biotype=protein_coding;locus_tag=AB11_RS13615;old_locus_tag=AB11_2471 NZ_JHDH01000129.1 Protein Homology CDS 20475 21257 . - 0 ID=cds-WP_032223588.1;Parent=gene-AB11_RS13615;Dbxref=GenBank:WP_032223588.1;Name=WP_032223588.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfaX;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AB11_RS13615;product=IclR family transcriptional regulator;protein_id=WP_032223588.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 21477 22679 . - . ID=gene-AB11_RS13620;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AB11_RS13620;old_locus_tag=AB11_2472 NZ_JHDH01000129.1 Protein Homology CDS 21477 22679 . - 0 ID=cds-WP_000921621.1;Parent=gene-AB11_RS13620;Dbxref=GenBank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AB11_RS13620;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921621.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 22779 23321 . - . ID=gene-AB11_RS13625;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AB11_RS13625;old_locus_tag=AB11_2473 NZ_JHDH01000129.1 Protein Homology CDS 22779 23321 . - 0 ID=cds-WP_001300392.1;Parent=gene-AB11_RS13625;Dbxref=GenBank:WP_001300392.1;Name=WP_001300392.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416753.4;locus_tag=AB11_RS13625;product=YfaZ family protein;protein_id=WP_001300392.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 23600 24025 . + . ID=gene-AB11_RS13630;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AB11_RS13630;old_locus_tag=AB11_2474 NZ_JHDH01000129.1 Protein Homology CDS 23600 24025 . + 0 ID=cds-WP_001300564.1;Parent=gene-AB11_RS13630;Dbxref=GenBank:WP_001300564.1;Name=WP_001300564.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416754.1;locus_tag=AB11_RS13630;product=nucleoside triphosphatase NudI;protein_id=WP_001300564.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 24064 24666 . - . ID=gene-AB11_RS13635;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AB11_RS13635;old_locus_tag=AB11_2475 NZ_JHDH01000129.1 Protein Homology CDS 24064 24666 . - 0 ID=cds-WP_000879112.1;Parent=gene-AB11_RS13635;Dbxref=GenBank:WP_000879112.1;Name=WP_000879112.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416755.1;locus_tag=AB11_RS13635;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_000879112.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 24974 26113 . + . ID=gene-AB11_RS13640;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AB11_RS13640;old_locus_tag=AB11_2476 NZ_JHDH01000129.1 Protein Homology CDS 24974 26113 . + 0 ID=cds-WP_001295286.1;Parent=gene-AB11_RS13640;Dbxref=GenBank:WP_001295286.1;Name=WP_001295286.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AB11_RS13640;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001295286.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 26117 27085 . + . ID=gene-AB11_RS13645;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AB11_RS13645;old_locus_tag=AB11_2477 NZ_JHDH01000129.1 Protein Homology CDS 26117 27085 . + 0 ID=cds-WP_000461657.1;Parent=gene-AB11_RS13645;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AB11_RS13645;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 27085 29067 . + . ID=gene-AB11_RS13650;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AB11_RS13650;old_locus_tag=AB11_2478 NZ_JHDH01000129.1 Protein Homology CDS 27085 29067 . + 0 ID=cds-WP_000860273.1;Parent=gene-AB11_RS13650;Dbxref=GenBank:WP_000860273.1;Name=WP_000860273.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AB11_RS13650;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000860273.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 29064 29954 . + . ID=gene-AB11_RS13655;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AB11_RS13655;old_locus_tag=AB11_2479 NZ_JHDH01000129.1 Protein Homology CDS 29064 29954 . + 0 ID=cds-WP_001463543.1;Parent=gene-AB11_RS13655;Dbxref=GenBank:WP_001463543.1;Name=WP_001463543.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AB11_RS13655;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_001463543.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 29954 31606 . + . ID=gene-AB11_RS13660;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AB11_RS13660;old_locus_tag=AB11_2480 NZ_JHDH01000129.1 Protein Homology CDS 29954 31606 . + 0 ID=cds-WP_000844057.1;Parent=gene-AB11_RS13660;Dbxref=GenBank:WP_000844057.1;Name=WP_000844057.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AB11_RS13660;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844057.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 31603 31938 . + . ID=gene-AB11_RS13665;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AB11_RS13665;old_locus_tag=AB11_2481 NZ_JHDH01000129.1 Protein Homology CDS 31603 31938 . + 0 ID=cds-WP_000638031.1;Parent=gene-AB11_RS13665;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AB11_RS13665;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 31938 32324 . + . ID=gene-AB11_RS13670;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AB11_RS13670;old_locus_tag=AB11_2482 NZ_JHDH01000129.1 Protein Homology CDS 31938 32324 . + 0 ID=cds-WP_000523880.1;Parent=gene-AB11_RS13670;Dbxref=GenBank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AB11_RS13670;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 32318 32584 . - . ID=gene-AB11_RS13675;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AB11_RS13675;old_locus_tag=AB11_2483 NZ_JHDH01000129.1 Protein Homology CDS 32318 32584 . - 0 ID=cds-WP_001295285.1;Parent=gene-AB11_RS13675;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AB11_RS13675;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 32694 34049 . - . ID=gene-AB11_RS13680;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AB11_RS13680;old_locus_tag=AB11_2484 NZ_JHDH01000129.1 Protein Homology CDS 32694 34049 . - 0 ID=cds-WP_000577625.1;Parent=gene-AB11_RS13680;Dbxref=GenBank:WP_000577625.1;Name=WP_000577625.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AB11_RS13680;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 34046 35008 . - . ID=gene-AB11_RS13685;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AB11_RS13685;old_locus_tag=AB11_2485 NZ_JHDH01000129.1 Protein Homology CDS 34046 35008 . - 0 ID=cds-WP_001255628.1;Parent=gene-AB11_RS13685;Dbxref=GenBank:WP_001255628.1;Name=WP_001255628.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416764.1;locus_tag=AB11_RS13685;product=o-succinylbenzoate synthase;protein_id=WP_001255628.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 35008 35865 . - . ID=gene-AB11_RS13690;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AB11_RS13690;old_locus_tag=AB11_2486 NZ_JHDH01000129.1 Protein Homology CDS 35008 35865 . - 0 ID=cds-WP_000639996.1;Parent=gene-AB11_RS13690;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AB11_RS13690;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 35880 36638 . - . ID=gene-AB11_RS13695;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AB11_RS13695;old_locus_tag=AB11_2487 NZ_JHDH01000129.1 Protein Homology CDS 35880 36638 . - 0 ID=cds-WP_000600499.1;Parent=gene-AB11_RS13695;Dbxref=GenBank:WP_000600499.1;Name=WP_000600499.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AB11_RS13695;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600499.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 36635 38305 . - . ID=gene-AB11_RS13700;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AB11_RS13700;old_locus_tag=AB11_2488 NZ_JHDH01000129.1 Protein Homology CDS 36635 38305 . - 0 ID=cds-WP_001341573.1;Parent=gene-AB11_RS13700;Dbxref=GenBank:WP_001341573.1;Name=WP_001341573.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AB11_RS13700;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001341573.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 38394 39689 . - . ID=gene-AB11_RS13705;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AB11_RS13705;old_locus_tag=AB11_2489 NZ_JHDH01000129.1 Protein Homology CDS 38394 39689 . - 0 ID=cds-WP_001564815.1;Parent=gene-AB11_RS13705;Dbxref=GenBank:WP_001564815.1;Name=WP_001564815.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311180.2;locus_tag=AB11_RS13705;product=isochorismate synthase MenF;protein_id=WP_001564815.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 39768 40073 . - . ID=gene-AB11_RS13710;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AB11_RS13710;old_locus_tag=AB11_2490 NZ_JHDH01000129.1 Protein Homology CDS 39768 40073 . - 0 ID=cds-WP_000070621.1;Parent=gene-AB11_RS13710;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AB11_RS13710;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 40128 40589 . - . ID=gene-AB11_RS13715;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AB11_RS13715;old_locus_tag=AB11_2491 NZ_JHDH01000129.1 Protein Homology CDS 40128 40589 . - 0 ID=cds-WP_000574088.1;Parent=gene-AB11_RS13715;Dbxref=GenBank:WP_000574088.1;Name=WP_000574088.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311182.1;locus_tag=AB11_RS13715;product=GNAT family N-acetyltransferase;protein_id=WP_000574088.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 40654 41571 . + . ID=gene-AB11_RS13720;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AB11_RS13720;old_locus_tag=AB11_2492 NZ_JHDH01000129.1 Protein Homology CDS 40654 41571 . + 0 ID=cds-WP_001300687.1;Parent=gene-AB11_RS13720;Dbxref=GenBank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AB11_RS13720;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11 NZ_JHDH01000129.1 RefSeq gene 41731 42034 . + . ID=gene-AB11_RS13725;Name=AB11_RS13725;end_range=42034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13725;old_locus_tag=AB11_2493;partial=true NZ_JHDH01000129.1 Protein Homology CDS 41731 42034 . + 0 ID=cds-WP_000567742.1;Parent=gene-AB11_RS13725;Dbxref=GenBank:WP_000567742.1;Name=WP_000567742.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=42034,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS13725;partial=true;product=transposase;protein_id=WP_000567742.1;transl_table=11 ##sequence-region NZ_JHDH01000130.1 1 57455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000130.1 RefSeq region 1 57455 . + . ID=NZ_JHDH01000130.1:1..57455;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000130.1 RefSeq pseudogene 1 595 . - . ID=gene-AB11_RS13730;Name=AB11_RS13730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13730;old_locus_tag=AB11_2494;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000130.1 Protein Homology CDS 1 595 . - 0 ID=cds-AB11_RS13730;Parent=gene-AB11_RS13730;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS13730;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000130.1 RefSeq pseudogene 648 1049 . + . ID=gene-AB11_RS13735;Name=traE;gbkey=Gene;gene=traE;gene_biotype=pseudogene;locus_tag=AB11_RS13735;old_locus_tag=AB11_2495;partial=true;pseudo=true;start_range=.,648 NZ_JHDH01000130.1 Protein Homology CDS 648 1049 . + 0 ID=cds-AB11_RS13735;Parent=gene-AB11_RS13735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AB11_RS13735;partial=true;product=type IV conjugative transfer system protein TraE;pseudo=true;start_range=.,648;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 1036 1764 . + . ID=gene-AB11_RS13740;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AB11_RS13740;old_locus_tag=AB11_2496 NZ_JHDH01000130.1 Protein Homology CDS 1036 1764 . + 0 ID=cds-WP_001774291.1;Parent=gene-AB11_RS13740;Dbxref=GenBank:WP_001774291.1;Name=WP_001774291.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AB11_RS13740;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001774291.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 1764 3191 . + . ID=gene-AB11_RS13745;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AB11_RS13745;old_locus_tag=AB11_2497 NZ_JHDH01000130.1 Protein Homology CDS 1764 3191 . + 0 ID=cds-WP_021552501.1;Parent=gene-AB11_RS13745;Dbxref=GenBank:WP_021552501.1;Name=WP_021552501.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AB11_RS13745;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_021552501.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 3181 3771 . + . ID=gene-AB11_RS13750;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AB11_RS13750;old_locus_tag=AB11_2498 NZ_JHDH01000130.1 Protein Homology CDS 3181 3771 . + 0 ID=cds-WP_032223599.1;Parent=gene-AB11_RS13750;Dbxref=GenBank:WP_032223599.1;Name=WP_032223599.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AB11_RS13750;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_032223599.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 3758 3955 . + . ID=gene-AB11_RS13755;Name=AB11_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13755;old_locus_tag=AB11_2499 NZ_JHDH01000130.1 Protein Homology CDS 3758 3955 . + 0 ID=cds-WP_001774293.1;Parent=gene-AB11_RS13755;Dbxref=GenBank:WP_001774293.1;Name=WP_001774293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001423674.1;locus_tag=AB11_RS13755;product=conjugal transfer protein TrbD;protein_id=WP_001774293.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 3967 4218 . + . ID=gene-AB11_RS13760;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AB11_RS13760;old_locus_tag=AB11_2500 NZ_JHDH01000130.1 Protein Homology CDS 3967 4218 . + 0 ID=cds-WP_001774294.1;Parent=gene-AB11_RS13760;Dbxref=GenBank:WP_001774294.1;Name=WP_001774294.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AB11_RS13760;product=conjugal transfer protein TrbG;protein_id=WP_001774294.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 4215 4730 . + . ID=gene-AB11_RS13765;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AB11_RS13765;old_locus_tag=AB11_2501 NZ_JHDH01000130.1 Protein Homology CDS 4215 4730 . + 0 ID=cds-WP_001774295.1;Parent=gene-AB11_RS13765;Dbxref=GenBank:WP_001774295.1;Name=WP_001774295.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AB11_RS13765;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_001774295.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 4865 5086 . + . ID=gene-AB11_RS13770;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AB11_RS13770;old_locus_tag=AB11_2502 NZ_JHDH01000130.1 Protein Homology CDS 4865 5086 . + 0 ID=cds-WP_001774296.1;Parent=gene-AB11_RS13770;Dbxref=GenBank:WP_001774296.1;Name=WP_001774296.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AB11_RS13770;product=conjugal transfer protein TraR;protein_id=WP_001774296.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 5246 7873 . + . ID=gene-AB11_RS13775;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AB11_RS13775;old_locus_tag=AB11_2504 NZ_JHDH01000130.1 Protein Homology CDS 5246 7873 . + 0 ID=cds-WP_001064243.1;Parent=gene-AB11_RS13775;Dbxref=GenBank:WP_001064243.1;Name=WP_001064243.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AB11_RS13775;product=type IV secretion system protein TraC;protein_id=WP_001064243.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 7870 8256 . + . ID=gene-AB11_RS13780;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AB11_RS13780;old_locus_tag=AB11_2505 NZ_JHDH01000130.1 Protein Homology CDS 7870 8256 . + 0 ID=cds-WP_001774298.1;Parent=gene-AB11_RS13780;Dbxref=GenBank:WP_001774298.1;Name=WP_001774298.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AB11_RS13780;product=type-F conjugative transfer system protein TrbI;protein_id=WP_001774298.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 8253 8885 . + . ID=gene-AB11_RS13785;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AB11_RS13785;old_locus_tag=AB11_2506 NZ_JHDH01000130.1 Protein Homology CDS 8253 8885 . + 0 ID=cds-WP_001774299.1;Parent=gene-AB11_RS13785;Dbxref=GenBank:WP_001774299.1;Name=WP_001774299.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AB11_RS13785;product=type-F conjugative transfer system protein TraW;protein_id=WP_001774299.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 8882 9874 . + . ID=gene-AB11_RS13790;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AB11_RS13790;old_locus_tag=AB11_2507 NZ_JHDH01000130.1 Protein Homology CDS 8882 9874 . + 0 ID=cds-WP_032223601.1;Parent=gene-AB11_RS13790;Dbxref=GenBank:WP_032223601.1;Name=WP_032223601.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AB11_RS13790;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_032223601.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 9883 10521 . + . ID=gene-AB11_RS13795;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AB11_RS13795;old_locus_tag=AB11_2508 NZ_JHDH01000130.1 Protein Homology CDS 9883 10521 . + 0 ID=cds-WP_001595269.1;Parent=gene-AB11_RS13795;Dbxref=GenBank:WP_001595269.1;Name=WP_001595269.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553832.1;locus_tag=AB11_RS13795;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001595269.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 10518 12326 . + . ID=gene-AB11_RS13800;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AB11_RS13800;old_locus_tag=AB11_2509 NZ_JHDH01000130.1 Protein Homology CDS 10518 12326 . + 0 ID=cds-WP_001774300.1;Parent=gene-AB11_RS13800;Dbxref=GenBank:WP_001774300.1;Name=WP_001774300.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AB11_RS13800;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_001774300.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 12353 12610 . + . ID=gene-AB11_RS13805;Name=AB11_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13805;old_locus_tag=AB11_2510 NZ_JHDH01000130.1 Protein Homology CDS 12353 12610 . + 0 ID=cds-WP_001595267.1;Parent=gene-AB11_RS13805;Dbxref=GenBank:WP_001595267.1;Name=WP_001595267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AB11_RS13805;product=conjugal transfer protein TrbE;protein_id=WP_001595267.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 12603 13346 . + . ID=gene-AB11_RS13810;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AB11_RS13810;old_locus_tag=AB11_2511 NZ_JHDH01000130.1 Protein Homology CDS 12603 13346 . + 0 ID=cds-WP_001774301.1;Parent=gene-AB11_RS13810;Dbxref=GenBank:WP_001774301.1;Name=WP_001774301.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AB11_RS13810;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001774301.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 13360 13725 . + . ID=gene-AB11_RS13815;Name=AB11_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13815;old_locus_tag=AB11_2512 NZ_JHDH01000130.1 Protein Homology CDS 13360 13725 . + 0 ID=cds-WP_001774302.1;Parent=gene-AB11_RS13815;Dbxref=GenBank:WP_001774302.1;Name=WP_001774302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008453.1;locus_tag=AB11_RS13815;product=hypothetical protein;protein_id=WP_001774302.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 14104 14385 . + . ID=gene-AB11_RS13820;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AB11_RS13820;old_locus_tag=AB11_2514 NZ_JHDH01000130.1 Protein Homology CDS 14104 14385 . + 0 ID=cds-WP_001595262.1;Parent=gene-AB11_RS13820;Dbxref=GenBank:WP_001595262.1;Name=WP_001595262.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001732192.1;locus_tag=AB11_RS13820;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_001595262.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 14372 14917 . + . ID=gene-AB11_RS13825;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AB11_RS13825;old_locus_tag=AB11_2515 NZ_JHDH01000130.1 Protein Homology CDS 14372 14917 . + 0 ID=cds-WP_001774304.1;Parent=gene-AB11_RS13825;Dbxref=GenBank:WP_001774304.1;Name=WP_001774304.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AB11_RS13825;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_001774304.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 14847 15188 . + . ID=gene-AB11_RS13830;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AB11_RS13830;old_locus_tag=AB11_2516 NZ_JHDH01000130.1 Protein Homology CDS 14847 15188 . + 0 ID=cds-WP_071589462.1;Parent=gene-AB11_RS13830;Dbxref=GenBank:WP_071589462.1;Name=WP_071589462.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477176.1;locus_tag=AB11_RS13830;product=P-type conjugative transfer protein TrbJ;protein_id=WP_071589462.1;transl_table=11 NZ_JHDH01000130.1 RefSeq pseudogene 15175 15569 . + . ID=gene-AB11_RS13835;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=pseudogene;locus_tag=AB11_RS13835;pseudo=true NZ_JHDH01000130.1 Protein Homology CDS 15175 15569 . + 0 ID=cds-AB11_RS13835;Parent=gene-AB11_RS13835;Note=frameshifted;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001700179.1;locus_tag=AB11_RS13835;product=F-type conjugal transfer protein TrbF;pseudo=true;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 15556 16929 . + . ID=gene-AB11_RS13840;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AB11_RS13840;old_locus_tag=AB11_2519 NZ_JHDH01000130.1 Protein Homology CDS 15556 16929 . + 0 ID=cds-WP_001595257.1;Parent=gene-AB11_RS13840;Dbxref=GenBank:WP_001595257.1;Name=WP_001595257.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137359.1;locus_tag=AB11_RS13840;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001595257.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 16926 19748 . + . ID=gene-AB11_RS13845;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AB11_RS13845;old_locus_tag=AB11_2520 NZ_JHDH01000130.1 Protein Homology CDS 16926 19748 . + 0 ID=cds-WP_032223607.1;Parent=gene-AB11_RS13845;Dbxref=GenBank:WP_032223607.1;Name=WP_032223607.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774307.1;locus_tag=AB11_RS13845;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_032223607.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 19764 20261 . + . ID=gene-AB11_RS13850;Name=AB11_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13850 NZ_JHDH01000130.1 Protein Homology CDS 19764 20261 . + 0 ID=cds-WP_032143850.1;Parent=gene-AB11_RS13850;Dbxref=GenBank:WP_032143850.1;Name=WP_032143850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605858.1;locus_tag=AB11_RS13850;product=entry exclusion protein;protein_id=WP_032143850.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 20293 21024 . + . ID=gene-AB11_RS13855;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AB11_RS13855;old_locus_tag=AB11_2521 NZ_JHDH01000130.1 Protein Homology CDS 20293 21024 . + 0 ID=cds-WP_000850424.1;Parent=gene-AB11_RS13855;Dbxref=GenBank:WP_000850424.1;Name=WP_000850424.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AB11_RS13855;product=conjugal transfer complement resistance protein TraT;protein_id=WP_000850424.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 21277 23511 . + . ID=gene-AB11_RS13860;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AB11_RS13860;old_locus_tag=AB11_2522 NZ_JHDH01000130.1 Protein Homology CDS 21277 23511 . + 0 ID=cds-WP_032223609.1;Parent=gene-AB11_RS13860;Dbxref=GenBank:WP_032223609.1;Name=WP_032223609.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577029.1;locus_tag=AB11_RS13860;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032223609.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 23511 28781 . + . ID=gene-AB11_RS13865;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AB11_RS13865;old_locus_tag=AB11_2523 NZ_JHDH01000130.1 Protein Homology CDS 23511 28781 . + 0 ID=cds-WP_032223612.1;Parent=gene-AB11_RS13865;Dbxref=GenBank:WP_032223612.1;Name=WP_032223612.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AB11_RS13865;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032223612.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 28801 29547 . + . ID=gene-AB11_RS13870;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AB11_RS13870;old_locus_tag=AB11_2524 NZ_JHDH01000130.1 Protein Homology CDS 28801 29547 . + 0 ID=cds-WP_001774311.1;Parent=gene-AB11_RS13870;Dbxref=GenBank:WP_001774311.1;Name=WP_001774311.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052669.1;locus_tag=AB11_RS13870;product=conjugal transfer pilus acetylase TraX;protein_id=WP_001774311.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 29602 30162 . + . ID=gene-AB11_RS13875;Name=AB11_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13875;old_locus_tag=AB11_2525 NZ_JHDH01000130.1 Protein Homology CDS 29602 30162 . + 0 ID=cds-WP_001774312.1;Parent=gene-AB11_RS13875;Dbxref=GenBank:WP_001774312.1;Name=WP_001774312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB11_RS13875;product=fertility inhibition protein FinO;protein_id=WP_001774312.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 30298 30510 . + . ID=gene-AB11_RS13880;Name=AB11_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13880 NZ_JHDH01000130.1 Protein Homology CDS 30298 30510 . + 0 ID=cds-WP_001299730.1;Parent=gene-AB11_RS13880;Dbxref=GenBank:WP_001299730.1;Name=WP_001299730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AB11_RS13880;product=ANR family transcriptional regulator;protein_id=WP_001299730.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 30752 31213 . + . ID=gene-AB11_RS13885;Name=AB11_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13885;old_locus_tag=AB11_2526 NZ_JHDH01000130.1 Protein Homology CDS 30752 31213 . + 0 ID=cds-WP_001774313.1;Parent=gene-AB11_RS13885;Dbxref=GenBank:WP_001774313.1;Name=WP_001774313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AB11_RS13885;product=thermonuclease family protein;protein_id=WP_001774313.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 31259 31468 . + . ID=gene-AB11_RS13890;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB11_RS13890 NZ_JHDH01000130.1 Protein Homology CDS 31259 31468 . + 0 ID=cds-WP_001299729.1;Parent=gene-AB11_RS13890;Dbxref=GenBank:WP_001299729.1;Name=WP_001299729.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AB11_RS13890;product=hemolysin expression modulator Hha;protein_id=WP_001299729.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 31506 32096 . + . ID=gene-AB11_RS13895;Name=AB11_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13895;old_locus_tag=AB11_2528 NZ_JHDH01000130.1 Protein Homology CDS 31506 32096 . + 0 ID=cds-WP_001774314.1;Parent=gene-AB11_RS13895;Dbxref=GenBank:WP_001774314.1;Name=WP_001774314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AB11_RS13895;product=DUF2726 domain-containing protein;protein_id=WP_001774314.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 32336 32593 . + . ID=gene-AB11_RS13900;Name=AB11_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13900 NZ_JHDH01000130.1 Protein Homology CDS 32336 32593 . + 0 ID=cds-WP_000083826.1;Parent=gene-AB11_RS13900;Dbxref=GenBank:WP_000083826.1;Name=WP_000083826.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083822.1;locus_tag=AB11_RS13900;product=replication regulatory protein RepA;protein_id=WP_000083826.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 32827 32901 . + . ID=gene-AB11_RS13905;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB11_RS13905 NZ_JHDH01000130.1 Protein Homology CDS 32827 32901 . + 0 ID=cds-WP_001367777.1;Parent=gene-AB11_RS13905;Dbxref=GenBank:WP_001367777.1;Name=WP_001367777.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AB11_RS13905;product=RepA leader peptide Tap;protein_id=WP_001367777.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 32894 33751 . + . ID=gene-AB11_RS13910;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB11_RS13910;old_locus_tag=AB11_2530 NZ_JHDH01000130.1 Protein Homology CDS 32894 33751 . + 0 ID=cds-WP_001774315.1;Parent=gene-AB11_RS13910;Dbxref=GenBank:WP_001774315.1;Name=WP_001774315.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB11_RS13910;product=incFII family plasmid replication initiator RepA;protein_id=WP_001774315.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 34667 34951 . + . ID=gene-AB11_RS13915;Name=AB11_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13915;old_locus_tag=AB11_2531 NZ_JHDH01000130.1 Protein Homology CDS 34667 34951 . + 0 ID=cds-WP_024188746.1;Parent=gene-AB11_RS13915;Dbxref=GenBank:WP_024188746.1;Name=WP_024188746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052676.1;locus_tag=AB11_RS13915;product=CopG family ribbon-helix-helix protein;protein_id=WP_024188746.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 34951 35226 . + . ID=gene-AB11_RS13920;Name=AB11_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13920;old_locus_tag=AB11_2532 NZ_JHDH01000130.1 Protein Homology CDS 34951 35226 . + 0 ID=cds-WP_001620845.1;Parent=gene-AB11_RS13920;Dbxref=GenBank:WP_001620845.1;Name=WP_001620845.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AB11_RS13920;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001620845.1;transl_table=11 NZ_JHDH01000130.1 RefSeq pseudogene 35332 35535 . + . ID=gene-AB11_RS13925;Name=AB11_RS13925;end_range=35535,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13925;old_locus_tag=AB11_2533;partial=true;pseudo=true NZ_JHDH01000130.1 Protein Homology CDS 35332 35535 . + 0 ID=cds-AB11_RS13925;Parent=gene-AB11_RS13925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=35535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052678.1;locus_tag=AB11_RS13925;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 36041 36277 . + . ID=gene-AB11_RS13930;Name=cvi;gbkey=Gene;gene=cvi;gene_biotype=protein_coding;locus_tag=AB11_RS13930 NZ_JHDH01000130.1 Protein Homology CDS 36041 36277 . + 0 ID=cds-WP_032257624.1;Parent=gene-AB11_RS13930;Dbxref=GenBank:WP_032257624.1;Name=WP_032257624.1;gbkey=CDS;gene=cvi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323890.1;locus_tag=AB11_RS13930;product=colicin V immunity protein;protein_id=WP_032257624.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 36432 36740 . + . ID=gene-AB11_RS13935;Name=AB11_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13935;old_locus_tag=AB11_2535 NZ_JHDH01000130.1 Protein Homology CDS 36432 36740 . + 0 ID=cds-WP_042023361.1;Parent=gene-AB11_RS13935;Dbxref=GenBank:WP_042023361.1;Name=WP_042023361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377483.1;locus_tag=AB11_RS13935;product=DUF6404 family protein;protein_id=WP_042023361.1;transl_table=11 NZ_JHDH01000130.1 RefSeq pseudogene 36818 37119 . - . ID=gene-AB11_RS25600;Name=AB11_RS25600;end_range=37119,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25600;partial=true;pseudo=true NZ_JHDH01000130.1 Protein Homology CDS 36818 37119 . - 0 ID=cds-AB11_RS25600;Parent=gene-AB11_RS25600;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=37119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542561.1;locus_tag=AB11_RS25600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 37300 38334 . + . ID=gene-AB11_RS13940;Name=AB11_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13940;old_locus_tag=AB11_2536 NZ_JHDH01000130.1 Protein Homology CDS 37300 38334 . + 0 ID=cds-WP_001620850.1;Parent=gene-AB11_RS13940;Dbxref=GenBank:WP_001620850.1;Name=WP_001620850.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335133.1;locus_tag=AB11_RS13940;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_001620850.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 39105 41282 . + . ID=gene-AB11_RS13945;Name=iroN;gbkey=Gene;gene=iroN;gene_biotype=protein_coding;locus_tag=AB11_RS13945;old_locus_tag=AB11_2537 NZ_JHDH01000130.1 Protein Homology CDS 39105 41282 . + 0 ID=cds-WP_001774316.1;Parent=gene-AB11_RS13945;Dbxref=GenBank:WP_001774316.1;Name=WP_001774316.1;gbkey=CDS;gene=iroN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222186.1;locus_tag=AB11_RS13945;product=siderophore salmochelin receptor IroN;protein_id=WP_001774316.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 41327 42283 . - . ID=gene-AB11_RS13950;Name=iroE;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=AB11_RS13950;old_locus_tag=AB11_2538 NZ_JHDH01000130.1 Protein Homology CDS 41327 42283 . - 0 ID=cds-WP_001620854.1;Parent=gene-AB11_RS13950;Dbxref=GenBank:WP_001620854.1;Name=WP_001620854.1;gbkey=CDS;gene=iroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271276.1;locus_tag=AB11_RS13950;product=catecholate siderophore esterase IroE;protein_id=WP_001620854.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 42368 43597 . - . ID=gene-AB11_RS13955;Name=iroD;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=AB11_RS13955;old_locus_tag=AB11_2539 NZ_JHDH01000130.1 Protein Homology CDS 42368 43597 . - 0 ID=cds-WP_032223617.1;Parent=gene-AB11_RS13955;Dbxref=GenBank:WP_032223617.1;Name=WP_032223617.1;gbkey=CDS;gene=iroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933675.1;locus_tag=AB11_RS13955;product=catecholate siderophore esterase IroD;protein_id=WP_032223617.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 43701 47360 . - . ID=gene-AB11_RS13960;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=AB11_RS13960;old_locus_tag=AB11_2540 NZ_JHDH01000130.1 Protein Homology CDS 43701 47360 . - 0 ID=cds-WP_001774318.1;Parent=gene-AB11_RS13960;Dbxref=GenBank:WP_001774318.1;Name=WP_001774318.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318221.1;locus_tag=AB11_RS13960;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_001774318.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 47500 48615 . - . ID=gene-AB11_RS13965;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=AB11_RS13965;old_locus_tag=AB11_2541 NZ_JHDH01000130.1 Protein Homology CDS 47500 48615 . - 0 ID=cds-WP_001620858.1;Parent=gene-AB11_RS13965;Dbxref=GenBank:WP_001620858.1;Name=WP_001620858.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=AB11_RS13965;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001620858.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 49225 49404 . + . ID=gene-AB11_RS25240;Name=AB11_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25240;old_locus_tag=AB11_2542 NZ_JHDH01000130.1 Protein Homology CDS 49225 49404 . + 0 ID=cds-WP_001620859.1;Parent=gene-AB11_RS25240;Dbxref=GenBank:WP_001620859.1;Name=WP_001620859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620859.1;locus_tag=AB11_RS25240;product=hypothetical protein;protein_id=WP_001620859.1;transl_table=11 NZ_JHDH01000130.1 RefSeq pseudogene 49440 50588 . - . ID=gene-AB11_RS13970;Name=AB11_RS13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS13970;pseudo=true NZ_JHDH01000130.1 Protein Homology CDS 49440 50588 . - 0 ID=cds-AB11_RS13970;Parent=gene-AB11_RS13970;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558242.1;locus_tag=AB11_RS13970;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 51130 51432 . + . ID=gene-AB11_RS13975;Name=AB11_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13975;old_locus_tag=AB11_2547 NZ_JHDH01000130.1 Protein Homology CDS 51130 51432 . + 0 ID=cds-WP_001774321.1;Parent=gene-AB11_RS13975;Dbxref=GenBank:WP_001774321.1;Name=WP_001774321.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774321.1;locus_tag=AB11_RS13975;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_001774321.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 51490 52758 . + . ID=gene-AB11_RS13980;Name=AB11_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13980;old_locus_tag=AB11_2548 NZ_JHDH01000130.1 Protein Homology CDS 51490 52758 . + 0 ID=cds-WP_032143857.1;Parent=gene-AB11_RS13980;Dbxref=GenBank:WP_032143857.1;Name=WP_032143857.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001367434.1;locus_tag=AB11_RS13980;product=TolC family protein;protein_id=WP_032143857.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 52755 54902 . + . ID=gene-AB11_RS13985;Name=AB11_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13985;old_locus_tag=AB11_2549 NZ_JHDH01000130.1 Protein Homology CDS 52755 54902 . + 0 ID=cds-WP_001774323.1;Parent=gene-AB11_RS13985;Dbxref=GenBank:WP_001774323.1;Name=WP_001774323.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835429.1;locus_tag=AB11_RS13985;product=type I secretion system permease/ATPase;protein_id=WP_001774323.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 54962 56209 . + . ID=gene-AB11_RS13990;Name=AB11_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS13990;old_locus_tag=AB11_2550 NZ_JHDH01000130.1 Protein Homology CDS 54962 56209 . + 0 ID=cds-WP_001774324.1;Parent=gene-AB11_RS13990;Dbxref=GenBank:WP_001774324.1;Name=WP_001774324.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001380656.1;locus_tag=AB11_RS13990;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_001774324.1;transl_table=11 NZ_JHDH01000130.1 RefSeq gene 56495 57455 . + . ID=gene-AB11_RS25605;Name=AB11_RS25605;end_range=57455,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25605;old_locus_tag=AB11_2551;partial=true NZ_JHDH01000130.1 Protein Homology CDS 56495 57455 . + 0 ID=cds-WP_032223620.1;Parent=gene-AB11_RS25605;Dbxref=GenBank:WP_032223620.1;Name=WP_032223620.1;end_range=57455,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781912.1;locus_tag=AB11_RS25605;partial=true;product=GA-like domain-containing protein;protein_id=WP_032223620.1;transl_table=11 ##sequence-region NZ_JHDH01000131.1 1 85835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000131.1 RefSeq region 1 85835 . + . ID=NZ_JHDH01000131.1:1..85835;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000131.1 RefSeq gene 1 422 . + . ID=gene-AB11_RS14000;Name=AB11_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14000;old_locus_tag=AB11_2552;partial=true;start_range=.,1 NZ_JHDH01000131.1 Protein Homology CDS 1 422 . + 2 ID=cds-WP_032223628.1;Parent=gene-AB11_RS14000;Dbxref=GenBank:WP_032223628.1;Name=WP_032223628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS14000;partial=true;product=IS3 family transposase;protein_id=WP_032223628.1;start_range=.,1;transl_table=11 NZ_JHDH01000131.1 RefSeq pseudogene 558 1776 . + . ID=gene-AB11_RS14005;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=AB11_RS14005;pseudo=true NZ_JHDH01000131.1 Protein Homology CDS 558 1776 . + 0 ID=cds-AB11_RS14005;Parent=gene-AB11_RS14005;Note=frameshifted;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AB11_RS14005;product=deubiquitinase ElaD;pseudo=true;transl_table=11 NZ_JHDH01000131.1 RefSeq pseudogene 2187 2795 . + . ID=gene-AB11_RS25245;Name=AB11_RS25245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25245;pseudo=true NZ_JHDH01000131.1 Protein Homology CDS 2187 2795 . + 0 ID=cds-AB11_RS25245;Parent=gene-AB11_RS25245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353070.1;locus_tag=AB11_RS25245;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 2898 3401 . + . ID=gene-AB11_RS14015;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AB11_RS14015;old_locus_tag=AB11_2558 NZ_JHDH01000131.1 Protein Homology CDS 2898 3401 . + 0 ID=cds-WP_000525365.1;Parent=gene-AB11_RS14015;Dbxref=GenBank:WP_000525365.1;Name=WP_000525365.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AB11_RS14015;product=YfbM family protein;protein_id=WP_000525365.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 3468 4925 . - . ID=gene-AB11_RS14020;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AB11_RS14020;old_locus_tag=AB11_2559 NZ_JHDH01000131.1 Protein Homology CDS 3468 4925 . - 0 ID=cds-WP_000156701.1;Parent=gene-AB11_RS14020;Dbxref=GenBank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AB11_RS14020;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 4932 6461 . - . ID=gene-AB11_RS14025;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AB11_RS14025;old_locus_tag=AB11_2560 NZ_JHDH01000131.1 Protein Homology CDS 4932 6461 . - 0 ID=cds-WP_000926441.1;Parent=gene-AB11_RS14025;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AB11_RS14025;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 6625 8466 . - . ID=gene-AB11_RS14030;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AB11_RS14030;old_locus_tag=AB11_2561 NZ_JHDH01000131.1 Protein Homology CDS 6625 8466 . - 0 ID=cds-WP_001056644.1;Parent=gene-AB11_RS14030;Dbxref=GenBank:WP_001056644.1;Name=WP_001056644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AB11_RS14030;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056644.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 8463 8765 . - . ID=gene-AB11_RS14035;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AB11_RS14035;old_locus_tag=AB11_2562 NZ_JHDH01000131.1 Protein Homology CDS 8463 8765 . - 0 ID=cds-WP_000612644.1;Parent=gene-AB11_RS14035;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AB11_RS14035;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 8762 9316 . - . ID=gene-AB11_RS14040;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AB11_RS14040;old_locus_tag=AB11_2563 NZ_JHDH01000131.1 Protein Homology CDS 8762 9316 . - 0 ID=cds-WP_000393511.1;Parent=gene-AB11_RS14040;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AB11_RS14040;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 9328 9870 . - . ID=gene-AB11_RS14045;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AB11_RS14045;old_locus_tag=AB11_2564 NZ_JHDH01000131.1 Protein Homology CDS 9328 9870 . - 0 ID=cds-WP_000172749.1;Parent=gene-AB11_RS14045;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AB11_RS14045;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 9885 10862 . - . ID=gene-AB11_RS14050;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AB11_RS14050;old_locus_tag=AB11_2565 NZ_JHDH01000131.1 Protein Homology CDS 9885 10862 . - 0 ID=cds-WP_000118507.1;Parent=gene-AB11_RS14050;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AB11_RS14050;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 10859 13585 . - . ID=gene-AB11_RS14055;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AB11_RS14055;old_locus_tag=AB11_2566 NZ_JHDH01000131.1 Protein Homology CDS 10859 13585 . - 0 ID=cds-WP_000190937.1;Parent=gene-AB11_RS14055;Dbxref=GenBank:WP_000190937.1;Name=WP_000190937.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AB11_RS14055;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_000190937.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 13638 14975 . - . ID=gene-AB11_RS14060;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AB11_RS14060;old_locus_tag=AB11_2567 NZ_JHDH01000131.1 Protein Homology CDS 13638 14975 . - 0 ID=cds-WP_000789502.1;Parent=gene-AB11_RS14060;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AB11_RS14060;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 14972 15472 . - . ID=gene-AB11_RS14065;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AB11_RS14065;old_locus_tag=AB11_2568 NZ_JHDH01000131.1 Protein Homology CDS 14972 15472 . - 0 ID=cds-WP_000545042.1;Parent=gene-AB11_RS14065;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AB11_RS14065;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 15475 17277 . - . ID=gene-AB11_RS14070;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AB11_RS14070;old_locus_tag=AB11_2569 NZ_JHDH01000131.1 Protein Homology CDS 15475 17277 . - 0 ID=cds-WP_000247878.1;Parent=gene-AB11_RS14070;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AB11_RS14070;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 17371 18033 . - . ID=gene-AB11_RS14075;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AB11_RS14075;old_locus_tag=AB11_2570 NZ_JHDH01000131.1 Protein Homology CDS 17371 18033 . - 0 ID=cds-WP_000386733.1;Parent=gene-AB11_RS14075;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AB11_RS14075;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 18049 18492 . - . ID=gene-AB11_RS14080;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AB11_RS14080;old_locus_tag=AB11_2571 NZ_JHDH01000131.1 Protein Homology CDS 18049 18492 . - 0 ID=cds-WP_000062997.1;Parent=gene-AB11_RS14080;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AB11_RS14080;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 19123 20061 . - . ID=gene-AB11_RS14085;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AB11_RS14085;old_locus_tag=AB11_2573 NZ_JHDH01000131.1 Protein Homology CDS 19123 20061 . - 0 ID=cds-WP_000622290.1;Parent=gene-AB11_RS14085;Dbxref=GenBank:WP_000622290.1;Name=WP_000622290.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AB11_RS14085;product=transcriptional regulator LrhA;protein_id=WP_000622290.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 20981 22198 . + . ID=gene-AB11_RS14090;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AB11_RS14090;old_locus_tag=AB11_2574 NZ_JHDH01000131.1 Protein Homology CDS 20981 22198 . + 0 ID=cds-WP_000074527.1;Parent=gene-AB11_RS14090;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AB11_RS14090;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 22282 22881 . + . ID=gene-AB11_RS14095;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AB11_RS14095;old_locus_tag=AB11_2575 NZ_JHDH01000131.1 Protein Homology CDS 22282 22881 . + 0 ID=cds-WP_021570895.1;Parent=gene-AB11_RS14095;Dbxref=GenBank:WP_021570895.1;Name=WP_021570895.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416794.1;locus_tag=AB11_RS14095;product=5'-deoxynucleotidase;protein_id=WP_021570895.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 22940 24772 . - . ID=gene-AB11_RS14100;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AB11_RS14100;old_locus_tag=AB11_2576 NZ_JHDH01000131.1 Protein Homology CDS 22940 24772 . - 0 ID=cds-WP_001012899.1;Parent=gene-AB11_RS14100;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AB11_RS14100;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 24859 25509 . - . ID=gene-AB11_RS14105;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AB11_RS14105;old_locus_tag=AB11_2577 NZ_JHDH01000131.1 Protein Homology CDS 24859 25509 . - 0 ID=cds-WP_001203392.1;Parent=gene-AB11_RS14105;Dbxref=GenBank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AB11_RS14105;product=hexitol phosphatase HxpA;protein_id=WP_001203392.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 25520 26014 . - . ID=gene-AB11_RS14110;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AB11_RS14110;old_locus_tag=AB11_2578 NZ_JHDH01000131.1 Protein Homology CDS 25520 26014 . - 0 ID=cds-WP_000426124.1;Parent=gene-AB11_RS14110;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AB11_RS14110;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 26097 26552 . - . ID=gene-AB11_RS14115;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AB11_RS14115;old_locus_tag=AB11_2579 NZ_JHDH01000131.1 Protein Homology CDS 26097 26552 . - 0 ID=cds-WP_000106627.1;Parent=gene-AB11_RS14115;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AB11_RS14115;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 26890 28092 . + . ID=gene-AB11_RS14120;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AB11_RS14120;old_locus_tag=AB11_2581 NZ_JHDH01000131.1 Protein Homology CDS 26890 28092 . + 0 ID=cds-WP_032223631.1;Parent=gene-AB11_RS14120;Dbxref=GenBank:WP_032223631.1;Name=WP_032223631.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AB11_RS14120;product=acetate kinase;protein_id=WP_032223631.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 28167 30311 . + . ID=gene-AB11_RS14125;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AB11_RS14125;old_locus_tag=AB11_2582 NZ_JHDH01000131.1 Protein Homology CDS 28167 30311 . + 0 ID=cds-WP_000086722.1;Parent=gene-AB11_RS14125;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AB11_RS14125;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 30501 32021 . + . ID=gene-AB11_RS14130;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AB11_RS14130;old_locus_tag=AB11_2583 NZ_JHDH01000131.1 Protein Homology CDS 30501 32021 . + 0 ID=cds-WP_001274493.1;Parent=gene-AB11_RS14130;Dbxref=GenBank:WP_001274493.1;Name=WP_001274493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AB11_RS14130;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274493.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 32054 32596 . - . ID=gene-AB11_RS14135;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AB11_RS14135;old_locus_tag=AB11_2584 NZ_JHDH01000131.1 Protein Homology CDS 32054 32596 . - 0 ID=cds-WP_000437935.1;Parent=gene-AB11_RS14135;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AB11_RS14135;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 32654 33205 . - . ID=gene-AB11_RS14140;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AB11_RS14140;old_locus_tag=AB11_2585 NZ_JHDH01000131.1 Protein Homology CDS 32654 33205 . - 0 ID=cds-WP_032223633.1;Parent=gene-AB11_RS14140;Dbxref=GenBank:WP_032223633.1;Name=WP_032223633.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AB11_RS14140;product=phosphodiesterase;protein_id=WP_032223633.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 33261 33905 . - . ID=gene-AB11_RS14145;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AB11_RS14145;old_locus_tag=AB11_2586 NZ_JHDH01000131.1 Protein Homology CDS 33261 33905 . - 0 ID=cds-WP_000042442.1;Parent=gene-AB11_RS14145;Dbxref=GenBank:WP_000042442.1;Name=WP_000042442.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AB11_RS14145;product=glutathione transferase;protein_id=WP_000042442.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 34041 34688 . + . ID=gene-AB11_RS14150;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AB11_RS14150;old_locus_tag=AB11_2587 NZ_JHDH01000131.1 Protein Homology CDS 34041 34688 . + 0 ID=cds-WP_000566471.1;Parent=gene-AB11_RS14150;Dbxref=GenBank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AB11_RS14150;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 34745 35107 . + . ID=gene-AB11_RS14155;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AB11_RS14155;old_locus_tag=AB11_2588 NZ_JHDH01000131.1 Protein Homology CDS 34745 35107 . + 0 ID=cds-WP_000068457.1;Parent=gene-AB11_RS14155;Dbxref=GenBank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AB11_RS14155;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 35128 36021 . + . ID=gene-AB11_RS14160;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AB11_RS14160;old_locus_tag=AB11_2589 NZ_JHDH01000131.1 Protein Homology CDS 35128 36021 . + 0 ID=cds-WP_001028341.1;Parent=gene-AB11_RS14160;Dbxref=GenBank:WP_001028341.1;Name=WP_001028341.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AB11_RS14160;product=TIGR01777 family oxidoreductase;protein_id=WP_001028341.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 36069 36959 . - . ID=gene-AB11_RS14165;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AB11_RS14165;old_locus_tag=AB11_2590 NZ_JHDH01000131.1 Protein Homology CDS 36069 36959 . - 0 ID=cds-WP_000156149.1;Parent=gene-AB11_RS14165;Dbxref=GenBank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AB11_RS14165;product=recombination-promoting nuclease RpnB;protein_id=WP_000156149.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 37156 37929 . - . ID=gene-AB11_RS14170;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AB11_RS14170;old_locus_tag=AB11_2591 NZ_JHDH01000131.1 Protein Homology CDS 37156 37929 . - 0 ID=cds-WP_001293613.1;Parent=gene-AB11_RS14170;Dbxref=GenBank:WP_001293613.1;Name=WP_001293613.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416809.1;locus_tag=AB11_RS14170;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293613.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 37937 38653 . - . ID=gene-AB11_RS14175;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AB11_RS14175;old_locus_tag=AB11_2592 NZ_JHDH01000131.1 Protein Homology CDS 37937 38653 . - 0 ID=cds-WP_000569958.1;Parent=gene-AB11_RS14175;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AB11_RS14175;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 38650 39336 . - . ID=gene-AB11_RS14180;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AB11_RS14180;old_locus_tag=AB11_2593 NZ_JHDH01000131.1 Protein Homology CDS 38650 39336 . - 0 ID=cds-WP_000965522.1;Parent=gene-AB11_RS14180;Dbxref=GenBank:WP_000965522.1;Name=WP_000965522.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AB11_RS14180;product=histidine ABC transporter permease HisQ;protein_id=WP_000965522.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 39426 40208 . - . ID=gene-AB11_RS14185;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AB11_RS14185;old_locus_tag=AB11_2594 NZ_JHDH01000131.1 Protein Homology CDS 39426 40208 . - 0 ID=cds-WP_000737621.1;Parent=gene-AB11_RS14185;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AB11_RS14185;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 40429 41211 . - . ID=gene-AB11_RS14190;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AB11_RS14190;old_locus_tag=AB11_2595 NZ_JHDH01000131.1 Protein Homology CDS 40429 41211 . - 0 ID=cds-WP_000748271.1;Parent=gene-AB11_RS14190;Dbxref=GenBank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AB11_RS14190;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 41477 42046 . - . ID=gene-AB11_RS14195;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AB11_RS14195;old_locus_tag=AB11_2596 NZ_JHDH01000131.1 Protein Homology CDS 41477 42046 . - 0 ID=cds-WP_000825700.1;Parent=gene-AB11_RS14195;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AB11_RS14195;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 42141 43658 . - . ID=gene-AB11_RS14200;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AB11_RS14200;old_locus_tag=AB11_2597 NZ_JHDH01000131.1 Protein Homology CDS 42141 43658 . - 0 ID=cds-WP_000334220.1;Parent=gene-AB11_RS14200;Dbxref=GenBank:WP_000334220.1;Name=WP_000334220.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AB11_RS14200;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 43695 44183 . - . ID=gene-AB11_RS14205;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AB11_RS14205;old_locus_tag=AB11_2598 NZ_JHDH01000131.1 Protein Homology CDS 43695 44183 . - 0 ID=cds-WP_000262113.1;Parent=gene-AB11_RS14205;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AB11_RS14205;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 44442 45104 . - . ID=gene-AB11_RS14210;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AB11_RS14210;old_locus_tag=AB11_2599 NZ_JHDH01000131.1 Protein Homology CDS 44442 45104 . - 0 ID=cds-WP_000146992.1;Parent=gene-AB11_RS14210;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AB11_RS14210;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 45094 46362 . - . ID=gene-AB11_RS14215;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AB11_RS14215;old_locus_tag=AB11_2600 NZ_JHDH01000131.1 Protein Homology CDS 45094 46362 . - 0 ID=cds-WP_000584546.1;Parent=gene-AB11_RS14215;Dbxref=GenBank:WP_000584546.1;Name=WP_000584546.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AB11_RS14215;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584546.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 46432 47346 . - . ID=gene-AB11_RS14220;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AB11_RS14220;old_locus_tag=AB11_2601 NZ_JHDH01000131.1 Protein Homology CDS 46432 47346 . - 0 ID=cds-WP_000118404.1;Parent=gene-AB11_RS14220;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AB11_RS14220;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 47502 48161 . - . ID=gene-AB11_RS14225;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AB11_RS14225;old_locus_tag=AB11_2602 NZ_JHDH01000131.1 Protein Homology CDS 47502 48161 . - 0 ID=cds-WP_000364335.1;Parent=gene-AB11_RS14225;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AB11_RS14225;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 48244 49056 . - . ID=gene-AB11_RS14230;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AB11_RS14230;old_locus_tag=AB11_2603 NZ_JHDH01000131.1 Protein Homology CDS 48244 49056 . - 0 ID=cds-WP_032223636.1;Parent=gene-AB11_RS14230;Dbxref=GenBank:WP_032223636.1;Name=WP_032223636.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AB11_RS14230;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_032223636.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 49056 50069 . - . ID=gene-AB11_RS14235;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AB11_RS14235;old_locus_tag=AB11_2604 NZ_JHDH01000131.1 Protein Homology CDS 49056 50069 . - 0 ID=cds-WP_001289167.1;Parent=gene-AB11_RS14235;Dbxref=GenBank:WP_001289167.1;Name=WP_001289167.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AB11_RS14235;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 50135 51271 . - . ID=gene-AB11_RS14240;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AB11_RS14240;old_locus_tag=AB11_2605 NZ_JHDH01000131.1 Protein Homology CDS 50135 51271 . - 0 ID=cds-WP_000699145.1;Parent=gene-AB11_RS14240;Dbxref=GenBank:WP_000699145.1;Name=WP_000699145.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=AB11_RS14240;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699145.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 51370 52365 . + . ID=gene-AB11_RS14245;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AB11_RS14245;old_locus_tag=AB11_2606 NZ_JHDH01000131.1 Protein Homology CDS 51370 52365 . + 0 ID=cds-WP_000615834.1;Parent=gene-AB11_RS14245;Dbxref=GenBank:WP_000615834.1;Name=WP_000615834.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AB11_RS14245;product=flagella biosynthesis regulator Flk;protein_id=WP_000615834.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 52362 53540 . - . ID=gene-AB11_RS14250;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AB11_RS14250;old_locus_tag=AB11_2607 NZ_JHDH01000131.1 Protein Homology CDS 52362 53540 . - 0 ID=cds-WP_000127751.1;Parent=gene-AB11_RS14250;Dbxref=GenBank:WP_000127751.1;Name=WP_000127751.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311233.1;locus_tag=AB11_RS14250;product=arabinose transporter;protein_id=WP_000127751.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 53805 55025 . - . ID=gene-AB11_RS14255;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AB11_RS14255;old_locus_tag=AB11_2608 NZ_JHDH01000131.1 Protein Homology CDS 53805 55025 . - 0 ID=cds-WP_000817178.1;Parent=gene-AB11_RS14255;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AB11_RS14255;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 55184 57190 . + . ID=gene-AB11_RS14260;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AB11_RS14260;old_locus_tag=AB11_2609 NZ_JHDH01000131.1 Protein Homology CDS 55184 57190 . + 0 ID=cds-WP_000683789.1;Parent=gene-AB11_RS14260;Dbxref=GenBank:WP_000683789.1;Name=WP_000683789.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AB11_RS14260;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683789.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 57311 57589 . - . ID=gene-AB11_RS14265;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AB11_RS14265;old_locus_tag=AB11_2610 NZ_JHDH01000131.1 Protein Homology CDS 57311 57589 . - 0 ID=cds-WP_000559764.1;Parent=gene-AB11_RS14265;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AB11_RS14265;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 57623 58171 . - . ID=gene-AB11_RS14270;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AB11_RS14270;old_locus_tag=AB11_2611 NZ_JHDH01000131.1 Protein Homology CDS 57623 58171 . - 0 ID=cds-WP_001089222.1;Parent=gene-AB11_RS14270;Dbxref=GenBank:WP_001089222.1;Name=WP_001089222.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AB11_RS14270;product=elongation factor P hydroxylase;protein_id=WP_001089222.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 58171 58980 . - . ID=gene-AB11_RS14275;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AB11_RS14275;old_locus_tag=AB11_2612 NZ_JHDH01000131.1 Protein Homology CDS 58171 58980 . - 0 ID=cds-WP_000447361.1;Parent=gene-AB11_RS14275;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AB11_RS14275;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 58980 59804 . - . ID=gene-AB11_RS14280;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AB11_RS14280;old_locus_tag=AB11_2613 NZ_JHDH01000131.1 Protein Homology CDS 58980 59804 . - 0 ID=cds-WP_001043825.1;Parent=gene-AB11_RS14280;Dbxref=GenBank:WP_001043825.1;Name=WP_001043825.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AB11_RS14280;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 59808 60893 . - . ID=gene-AB11_RS14285;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AB11_RS14285;old_locus_tag=AB11_2614 NZ_JHDH01000131.1 Protein Homology CDS 59808 60893 . - 0 ID=cds-WP_001333535.1;Parent=gene-AB11_RS14285;Dbxref=GenBank:WP_001333535.1;Name=WP_001333535.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AB11_RS14285;product=chorismate synthase;protein_id=WP_001333535.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 60928 61860 . - . ID=gene-AB11_RS14290;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AB11_RS14290;old_locus_tag=AB11_2615 NZ_JHDH01000131.1 Protein Homology CDS 60928 61860 . - 0 ID=cds-WP_001300582.1;Parent=gene-AB11_RS14290;Dbxref=GenBank:WP_001300582.1;Name=WP_001300582.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AB11_RS14290;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 62026 62577 . + . ID=gene-AB11_RS14295;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AB11_RS14295;old_locus_tag=AB11_2616 NZ_JHDH01000131.1 Protein Homology CDS 62026 62577 . + 0 ID=cds-WP_000730806.1;Parent=gene-AB11_RS14295;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AB11_RS14295;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 62649 63506 . - . ID=gene-AB11_RS14300;Name=AB11_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14300;old_locus_tag=AB11_2617 NZ_JHDH01000131.1 Protein Homology CDS 62649 63506 . - 0 ID=cds-WP_000698770.1;Parent=gene-AB11_RS14300;Dbxref=GenBank:WP_000698770.1;Name=WP_000698770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698770.1;locus_tag=AB11_RS14300;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_000698770.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 63508 64047 . - . ID=gene-AB11_RS14305;Name=AB11_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14305;old_locus_tag=AB11_2618 NZ_JHDH01000131.1 Protein Homology CDS 63508 64047 . - 0 ID=cds-WP_000844747.1;Parent=gene-AB11_RS14305;Dbxref=GenBank:WP_000844747.1;Name=WP_000844747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242288.1;locus_tag=AB11_RS14305;product=fimbrial protein;protein_id=WP_000844747.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 64044 64532 . - . ID=gene-AB11_RS14310;Name=AB11_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14310;old_locus_tag=AB11_2619 NZ_JHDH01000131.1 Protein Homology CDS 64044 64532 . - 0 ID=cds-WP_000714137.1;Parent=gene-AB11_RS14310;Dbxref=GenBank:WP_000714137.1;Name=WP_000714137.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AB11_RS14310;product=fimbrial protein;protein_id=WP_000714137.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 64529 65038 . - . ID=gene-AB11_RS14315;Name=AB11_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14315;old_locus_tag=AB11_2620 NZ_JHDH01000131.1 Protein Homology CDS 64529 65038 . - 0 ID=cds-WP_000018448.1;Parent=gene-AB11_RS14315;Dbxref=GenBank:WP_000018448.1;Name=WP_000018448.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733155.1;locus_tag=AB11_RS14315;product=fimbrial protein;protein_id=WP_000018448.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 65054 65806 . - . ID=gene-AB11_RS14320;Name=AB11_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14320;old_locus_tag=AB11_2621 NZ_JHDH01000131.1 Protein Homology CDS 65054 65806 . - 0 ID=cds-WP_000482742.1;Parent=gene-AB11_RS14320;Dbxref=GenBank:WP_000482742.1;Name=WP_000482742.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482750.1;locus_tag=AB11_RS14320;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000482742.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 65826 68471 . - . ID=gene-AB11_RS14325;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AB11_RS14325;old_locus_tag=AB11_2622 NZ_JHDH01000131.1 Protein Homology CDS 65826 68471 . - 0 ID=cds-WP_021570896.1;Parent=gene-AB11_RS14325;Dbxref=GenBank:WP_021570896.1;Name=WP_021570896.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AB11_RS14325;product=fimbrial usher protein YfcU;protein_id=WP_021570896.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 68553 69116 . - . ID=gene-AB11_RS14330;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AB11_RS14330;old_locus_tag=AB11_2623 NZ_JHDH01000131.1 Protein Homology CDS 68553 69116 . - 0 ID=cds-WP_000033316.1;Parent=gene-AB11_RS14330;Dbxref=GenBank:WP_000033316.1;Name=WP_000033316.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AB11_RS14330;product=fimbrial protein;protein_id=WP_000033316.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 69797 70282 . - . ID=gene-AB11_RS14335;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AB11_RS14335;old_locus_tag=AB11_2626 NZ_JHDH01000131.1 Protein Homology CDS 69797 70282 . - 0 ID=cds-WP_001195819.1;Parent=gene-AB11_RS14335;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AB11_RS14335;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 70485 72629 . - . ID=gene-AB11_RS14340;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AB11_RS14340;old_locus_tag=AB11_2628 NZ_JHDH01000131.1 Protein Homology CDS 70485 72629 . - 0 ID=cds-WP_000426176.1;Parent=gene-AB11_RS14340;Dbxref=GenBank:WP_000426176.1;Name=WP_000426176.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416843.1;locus_tag=AB11_RS14340;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426176.1;transl_table=11 NZ_JHDH01000131.1 RefSeq pseudogene 72629 73940 . - . ID=gene-AB11_RS14345;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=AB11_RS14345;pseudo=true NZ_JHDH01000131.1 Protein Homology CDS 72629 73940 . - 0 ID=cds-AB11_RS14345;Parent=gene-AB11_RS14345;Note=frameshifted;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AB11_RS14345;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 74121 74405 . - . ID=gene-AB11_RS14350;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AB11_RS14350;old_locus_tag=AB11_2631 NZ_JHDH01000131.1 Protein Homology CDS 74121 74405 . - 0 ID=cds-WP_001296261.1;Parent=gene-AB11_RS14350;Dbxref=GenBank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AB11_RS14350;product=YfcZ/YiiS family protein;protein_id=WP_001296261.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 74777 76117 . + . ID=gene-AB11_RS14355;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AB11_RS14355;old_locus_tag=AB11_2632 NZ_JHDH01000131.1 Protein Homology CDS 74777 76117 . + 0 ID=cds-WP_001295701.1;Parent=gene-AB11_RS14355;Dbxref=GenBank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AB11_RS14355;product=long-chain fatty acid transporter FadL;protein_id=WP_001295701.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 76483 77541 . + . ID=gene-AB11_RS14360;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AB11_RS14360;old_locus_tag=AB11_2633 NZ_JHDH01000131.1 Protein Homology CDS 76483 77541 . + 0 ID=cds-WP_000937788.1;Parent=gene-AB11_RS14360;Dbxref=GenBank:WP_000937788.1;Name=WP_000937788.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AB11_RS14360;product=protein YfdF;protein_id=WP_000937788.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 77723 78478 . - . ID=gene-AB11_RS14365;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AB11_RS14365;old_locus_tag=AB11_2634 NZ_JHDH01000131.1 Protein Homology CDS 77723 78478 . - 0 ID=cds-WP_000776768.1;Parent=gene-AB11_RS14365;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AB11_RS14365;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 78772 79704 . + . ID=gene-AB11_RS14370;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AB11_RS14370;old_locus_tag=AB11_2636 NZ_JHDH01000131.1 Protein Homology CDS 78772 79704 . + 0 ID=cds-WP_000368140.1;Parent=gene-AB11_RS14370;Dbxref=GenBank:WP_000368140.1;Name=WP_000368140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AB11_RS14370;product=formate/nitrite transporter family protein;protein_id=WP_000368140.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 79780 79854 . + . ID=gene-AB11_RS14375;Name=AB11_RS14375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14375;old_locus_tag=AB11_2637 NZ_JHDH01000131.1 tRNAscan-SE tRNA 79780 79854 . + . ID=rna-AB11_RS14375;Parent=gene-AB11_RS14375;anticodon=(pos:79813..79815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14375;product=tRNA-Arg NZ_JHDH01000131.1 tRNAscan-SE exon 79780 79854 . + . ID=exon-AB11_RS14375-1;Parent=rna-AB11_RS14375;anticodon=(pos:79813..79815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14375;product=tRNA-Arg NZ_JHDH01000131.1 RefSeq gene 80016 81173 . + . ID=gene-AB11_RS14380;Name=intS;gbkey=Gene;gene=intS;gene_biotype=protein_coding;locus_tag=AB11_RS14380;old_locus_tag=AB11_2638 NZ_JHDH01000131.1 Protein Homology CDS 80016 81173 . + 0 ID=cds-WP_032223640.1;Parent=gene-AB11_RS14380;Dbxref=GenBank:WP_032223640.1;Name=WP_032223640.1;gbkey=CDS;gene=intS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416850.1;locus_tag=AB11_RS14380;product=prophage integrase IntS;protein_id=WP_032223640.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 81325 81687 . + . ID=gene-AB11_RS14385;Name=yfdG;gbkey=Gene;gene=yfdG;gene_biotype=protein_coding;locus_tag=AB11_RS14385 NZ_JHDH01000131.1 Protein Homology CDS 81325 81687 . + 0 ID=cds-WP_032223644.1;Parent=gene-AB11_RS14385;Dbxref=GenBank:WP_032223644.1;Name=WP_032223644.1;gbkey=CDS;gene=yfdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416851.1;locus_tag=AB11_RS14385;product=bactoprenol glucosyl transferase;protein_id=WP_032223644.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 81684 82616 . + . ID=gene-AB11_RS14390;Name=yfdH;gbkey=Gene;gene=yfdH;gene_biotype=protein_coding;locus_tag=AB11_RS14390;old_locus_tag=AB11_2639 NZ_JHDH01000131.1 Protein Homology CDS 81684 82616 . + 0 ID=cds-WP_032223645.1;Parent=gene-AB11_RS14390;Dbxref=GenBank:WP_032223645.1;Name=WP_032223645.1;Ontology_term=GO:0016757;gbkey=CDS;gene=yfdH;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703647.1;locus_tag=AB11_RS14390;product=glycosyltransferase family 2 protein;protein_id=WP_032223645.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 82613 84247 . + . ID=gene-AB11_RS14395;Name=AB11_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14395;old_locus_tag=AB11_2640 NZ_JHDH01000131.1 Protein Homology CDS 82613 84247 . + 0 ID=cds-WP_032223647.1;Parent=gene-AB11_RS14395;Dbxref=GenBank:WP_032223647.1;Name=WP_032223647.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.5;locus_tag=AB11_RS14395;product=DUF6056 family protein;protein_id=WP_032223647.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 84292 84666 . - . ID=gene-AB11_RS14400;Name=AB11_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14400 NZ_JHDH01000131.1 GeneMarkS-2+ CDS 84292 84666 . - 0 ID=cds-WP_162751860.1;Parent=gene-AB11_RS14400;Dbxref=GenBank:WP_162751860.1;Name=WP_162751860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS14400;product=hypothetical protein;protein_id=WP_162751860.1;transl_table=11 NZ_JHDH01000131.1 RefSeq gene 84878 85835 . - . ID=gene-AB11_RS14405;Name=AB11_RS14405;end_range=85835,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14405;old_locus_tag=AB11_2641;partial=true NZ_JHDH01000131.1 Protein Homology CDS 84878 85835 . - 1 ID=cds-WP_032222538.1-4;Parent=gene-AB11_RS14405;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;end_range=85835,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS14405;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;transl_table=11 ##sequence-region NZ_JHDH01000132.1 1 47021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000132.1 RefSeq region 1 47021 . + . ID=NZ_JHDH01000132.1:1..47021;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000132.1 RefSeq gene 147 1127 . - . ID=gene-AB11_RS14410;Name=AB11_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14410;old_locus_tag=AB11_2642 NZ_JHDH01000132.1 Protein Homology CDS 147 1127 . - 0 ID=cds-WP_000019440.1-5;Parent=gene-AB11_RS14410;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS14410;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 NZ_JHDH01000132.1 RefSeq pseudogene 1196 1390 . + . ID=gene-AB11_RS14415;Name=AB11_RS14415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS14415;old_locus_tag=AB11_2643;partial=true;pseudo=true;start_range=.,1196 NZ_JHDH01000132.1 Protein Homology CDS 1196 1390 . + 0 ID=cds-AB11_RS14415;Parent=gene-AB11_RS14415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309206.1;locus_tag=AB11_RS14415;partial=true;product=DUF2528 family protein;pseudo=true;start_range=.,1196;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 1426 2394 . + . ID=gene-AB11_RS14420;Name=AB11_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14420;old_locus_tag=AB11_2644 NZ_JHDH01000132.1 Protein Homology CDS 1426 2394 . + 0 ID=cds-WP_032223655.1;Parent=gene-AB11_RS14420;Dbxref=GenBank:WP_032223655.1;Name=WP_032223655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351814.1;locus_tag=AB11_RS14420;product=cell envelope integrity/translocation protein TolA;protein_id=WP_032223655.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 2419 2565 . + . ID=gene-AB11_RS14425;Name=AB11_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14425 NZ_JHDH01000132.1 Protein Homology CDS 2419 2565 . + 0 ID=cds-WP_032223658.1;Parent=gene-AB11_RS14425;Dbxref=GenBank:WP_032223658.1;Name=WP_032223658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231970.1;locus_tag=AB11_RS14425;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_032223658.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 2558 2671 . + . ID=gene-AB11_RS14430;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AB11_RS14430;old_locus_tag=AB11_2645 NZ_JHDH01000132.1 Protein Homology CDS 2558 2671 . + 0 ID=cds-WP_000361831.1;Parent=gene-AB11_RS14430;Dbxref=GenBank:WP_000361831.1;Name=WP_000361831.1;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361831.1;locus_tag=AB11_RS14430;product=host cell division inhibitory peptide Kil;protein_id=WP_000361831.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 2668 2856 . + . ID=gene-AB11_RS14435;Name=AB11_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14435;old_locus_tag=AB11_2646 NZ_JHDH01000132.1 Protein Homology CDS 2668 2856 . + 0 ID=cds-WP_000613346.1;Parent=gene-AB11_RS14435;Dbxref=GenBank:WP_000613346.1;Name=WP_000613346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238082.1;locus_tag=AB11_RS14435;product=hypothetical protein;protein_id=WP_000613346.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 2865 3545 . + . ID=gene-AB11_RS14440;Name=AB11_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14440;old_locus_tag=AB11_2647 NZ_JHDH01000132.1 Protein Homology CDS 2865 3545 . + 0 ID=cds-WP_032223661.1;Parent=gene-AB11_RS14440;Dbxref=GenBank:WP_032223661.1;Name=WP_032223661.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536247.1;locus_tag=AB11_RS14440;product=ATP-binding protein;protein_id=WP_032223661.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 3542 4129 . + . ID=gene-AB11_RS14445;Name=AB11_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14445;old_locus_tag=AB11_2648 NZ_JHDH01000132.1 Protein Homology CDS 3542 4129 . + 0 ID=cds-WP_032223663.1;Parent=gene-AB11_RS14445;Dbxref=GenBank:WP_032223663.1;Name=WP_032223663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966848.1;locus_tag=AB11_RS14445;product=hypothetical protein;protein_id=WP_032223663.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 4153 4449 . + . ID=gene-AB11_RS14450;Name=AB11_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14450;old_locus_tag=AB11_2649 NZ_JHDH01000132.1 Protein Homology CDS 4153 4449 . + 0 ID=cds-WP_032223665.1;Parent=gene-AB11_RS14450;Dbxref=GenBank:WP_032223665.1;Name=WP_032223665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=AB11_RS14450;product=phage anti-RecBCD protein;protein_id=WP_032223665.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 4460 4624 . + . ID=gene-AB11_RS14455;Name=AB11_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14455 NZ_JHDH01000132.1 Protein Homology CDS 4460 4624 . + 0 ID=cds-WP_032223698.1;Parent=gene-AB11_RS14455;Dbxref=GenBank:WP_032223698.1;Name=WP_032223698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015980168.1;locus_tag=AB11_RS14455;product=DUF2737 family protein;protein_id=WP_032223698.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 4621 5043 . + . ID=gene-AB11_RS14460;Name=AB11_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14460;old_locus_tag=AB11_2650 NZ_JHDH01000132.1 Protein Homology CDS 4621 5043 . + 0 ID=cds-WP_032223667.1;Parent=gene-AB11_RS14460;Dbxref=GenBank:WP_032223667.1;Name=WP_032223667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016042216.1;locus_tag=AB11_RS14460;product=hypothetical protein;protein_id=WP_032223667.1;transl_table=11 NZ_JHDH01000132.1 RefSeq pseudogene 5040 5405 . + . ID=gene-AB11_RS26075;Name=AB11_RS26075;end_range=5405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26075;partial=true;pseudo=true NZ_JHDH01000132.1 Protein Homology CDS 5040 5405 . + 0 ID=cds-AB11_RS26075;Parent=gene-AB11_RS26075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015976810.1;locus_tag=AB11_RS26075;partial=true;product=ead/Ea22-like family protein;pseudo=true;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 5921 6103 . + . ID=gene-AB11_RS14470;Name=AB11_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14470;old_locus_tag=AB11_2652 NZ_JHDH01000132.1 Protein Homology CDS 5921 6103 . + 0 ID=cds-WP_032223670.1;Parent=gene-AB11_RS14470;Dbxref=GenBank:WP_032223670.1;Name=WP_032223670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261532.1;locus_tag=AB11_RS14470;product=hypothetical protein;protein_id=WP_032223670.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 6100 6288 . + . ID=gene-AB11_RS14475;Name=AB11_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14475;old_locus_tag=AB11_2653 NZ_JHDH01000132.1 Protein Homology CDS 6100 6288 . + 0 ID=cds-WP_032223672.1;Parent=gene-AB11_RS14475;Dbxref=GenBank:WP_032223672.1;Name=WP_032223672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346428.1;locus_tag=AB11_RS14475;product=hypothetical protein;protein_id=WP_032223672.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 6290 6508 . + . ID=gene-AB11_RS14480;Name=AB11_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14480;old_locus_tag=AB11_2654 NZ_JHDH01000132.1 Protein Homology CDS 6290 6508 . + 0 ID=cds-WP_032223675.1;Parent=gene-AB11_RS14480;Dbxref=GenBank:WP_032223675.1;Name=WP_032223675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309193.1;locus_tag=AB11_RS14480;product=DUF4014 family protein;protein_id=WP_032223675.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 6510 7028 . + . ID=gene-AB11_RS14485;Name=AB11_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14485;old_locus_tag=AB11_2655 NZ_JHDH01000132.1 Protein Homology CDS 6510 7028 . + 0 ID=cds-WP_032223677.1;Parent=gene-AB11_RS14485;Dbxref=GenBank:WP_032223677.1;Name=WP_032223677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031454.1;locus_tag=AB11_RS14485;product=DUF551 domain-containing protein;protein_id=WP_032223677.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 7028 7306 . + . ID=gene-AB11_RS14490;Name=AB11_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14490;old_locus_tag=AB11_2656 NZ_JHDH01000132.1 Protein Homology CDS 7028 7306 . + 0 ID=cds-WP_001388117.1;Parent=gene-AB11_RS14490;Dbxref=GenBank:WP_001388117.1;Name=WP_001388117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063072.1;locus_tag=AB11_RS14490;product=DUF4752 family protein;protein_id=WP_001388117.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 7464 7763 . + . ID=gene-AB11_RS14495;Name=AB11_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14495;old_locus_tag=AB11_2657 NZ_JHDH01000132.1 Protein Homology CDS 7464 7763 . + 0 ID=cds-WP_001447403.1;Parent=gene-AB11_RS14495;Dbxref=GenBank:WP_001447403.1;Name=WP_001447403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309189.2;locus_tag=AB11_RS14495;product=hypothetical protein;protein_id=WP_001447403.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 7799 7966 . + . ID=gene-AB11_RS14500;Name=AB11_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14500;old_locus_tag=AB11_2658 NZ_JHDH01000132.1 Protein Homology CDS 7799 7966 . + 0 ID=cds-WP_032223679.1;Parent=gene-AB11_RS14500;Dbxref=GenBank:WP_032223679.1;Name=WP_032223679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308829.1;locus_tag=AB11_RS14500;product=hypothetical protein;protein_id=WP_032223679.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 8024 8224 . + . ID=gene-AB11_RS14505;Name=torI;gbkey=Gene;gene=torI;gene_biotype=protein_coding;locus_tag=AB11_RS14505;old_locus_tag=AB11_2659 NZ_JHDH01000132.1 Protein Homology CDS 8024 8224 . + 0 ID=cds-WP_001163428.1;Parent=gene-AB11_RS14505;Dbxref=GenBank:WP_001163428.1;Name=WP_001163428.1;gbkey=CDS;gene=torI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588463.1;locus_tag=AB11_RS14505;product=response regulator inhibitor TorI;protein_id=WP_001163428.1;transl_table=11 NZ_JHDH01000132.1 RefSeq pseudogene 8477 8677 . + . ID=gene-AB11_RS14510;Name=AB11_RS14510;end_range=8677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS14510;partial=true;pseudo=true NZ_JHDH01000132.1 Protein Homology CDS 8477 8677 . + 0 ID=cds-AB11_RS14510;Parent=gene-AB11_RS14510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=8677,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089393.1;locus_tag=AB11_RS14510;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000132.1 RefSeq pseudogene 8644 9051 . - . ID=gene-AB11_RS14515;Name=AB11_RS14515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS14515;old_locus_tag=AB11_2660;partial=true;pseudo=true;start_range=.,8644 NZ_JHDH01000132.1 Protein Homology CDS 8644 9051 . - 0 ID=cds-AB11_RS14515;Parent=gene-AB11_RS14515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AB11_RS14515;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,8644;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 9269 10606 . + . ID=gene-AB11_RS14520;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AB11_RS14520;old_locus_tag=AB11_2661 NZ_JHDH01000132.1 Protein Homology CDS 9269 10606 . + 0 ID=cds-WP_032223682.1;Parent=gene-AB11_RS14520;Dbxref=GenBank:WP_032223682.1;Name=WP_032223682.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AB11_RS14520;product=D-serine transporter DsdX;protein_id=WP_032223682.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 10624 11952 . + . ID=gene-AB11_RS14525;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AB11_RS14525;old_locus_tag=AB11_2662 NZ_JHDH01000132.1 Protein Homology CDS 10624 11952 . + 0 ID=cds-WP_000426426.1;Parent=gene-AB11_RS14525;Dbxref=GenBank:WP_000426426.1;Name=WP_000426426.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AB11_RS14525;product=D-serine ammonia-lyase;protein_id=WP_000426426.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 12060 13598 . - . ID=gene-AB11_RS14530;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AB11_RS14530;old_locus_tag=AB11_2663 NZ_JHDH01000132.1 Protein Homology CDS 12060 13598 . - 0 ID=cds-WP_032223684.1;Parent=gene-AB11_RS14530;Dbxref=GenBank:WP_032223684.1;Name=WP_032223684.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AB11_RS14530;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_032223684.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 13598 14761 . - . ID=gene-AB11_RS14535;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AB11_RS14535;old_locus_tag=AB11_2664 NZ_JHDH01000132.1 Protein Homology CDS 13598 14761 . - 0 ID=cds-WP_000435167.1;Parent=gene-AB11_RS14535;Dbxref=GenBank:WP_000435167.1;Name=WP_000435167.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AB11_RS14535;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435167.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 15177 15791 . + . ID=gene-AB11_RS14540;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AB11_RS14540;old_locus_tag=AB11_2665 NZ_JHDH01000132.1 Protein Homology CDS 15177 15791 . + 0 ID=cds-WP_000991370.1;Parent=gene-AB11_RS14540;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AB11_RS14540;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 15796 19389 . + . ID=gene-AB11_RS14545;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AB11_RS14545;old_locus_tag=AB11_2666 NZ_JHDH01000132.1 Protein Homology CDS 15796 19389 . + 0 ID=cds-WP_001355656.1;Parent=gene-AB11_RS14545;Dbxref=GenBank:WP_001355656.1;Name=WP_001355656.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AB11_RS14545;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001355656.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 19445 20590 . - . ID=gene-AB11_RS14550;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AB11_RS14550;old_locus_tag=AB11_2667 NZ_JHDH01000132.1 Protein Homology CDS 19445 20590 . - 0 ID=cds-WP_001296867.1;Parent=gene-AB11_RS14550;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AB11_RS14550;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 20664 21608 . - . ID=gene-AB11_RS14555;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AB11_RS14555;old_locus_tag=AB11_2668 NZ_JHDH01000132.1 Protein Homology CDS 20664 21608 . - 0 ID=cds-WP_000955028.1;Parent=gene-AB11_RS14555;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AB11_RS14555;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 21678 23372 . - . ID=gene-AB11_RS14560;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AB11_RS14560;old_locus_tag=AB11_2669 NZ_JHDH01000132.1 Protein Homology CDS 21678 23372 . - 0 ID=cds-WP_001283490.1;Parent=gene-AB11_RS14560;Dbxref=GenBank:WP_001283490.1;Name=WP_001283490.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AB11_RS14560;product=oxalyl-CoA decarboxylase;protein_id=WP_001283490.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 23426 24676 . - . ID=gene-AB11_RS14565;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AB11_RS14565;old_locus_tag=AB11_2670 NZ_JHDH01000132.1 Protein Homology CDS 23426 24676 . - 0 ID=cds-WP_000106759.1;Parent=gene-AB11_RS14565;Dbxref=GenBank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AB11_RS14565;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 25189 25824 . - . ID=gene-AB11_RS14570;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AB11_RS14570;old_locus_tag=AB11_2671 NZ_JHDH01000132.1 Protein Homology CDS 25189 25824 . - 0 ID=cds-WP_000825600.1;Parent=gene-AB11_RS14570;Dbxref=GenBank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=AB11_RS14570;product=YfdX family protein;protein_id=WP_000825600.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 26120 26395 . + . ID=gene-AB11_RS14575;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AB11_RS14575 NZ_JHDH01000132.1 Protein Homology CDS 26120 26395 . + 0 ID=cds-WP_000867631.1;Parent=gene-AB11_RS14575;Dbxref=GenBank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AB11_RS14575;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867631.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 26472 26714 . - . ID=gene-AB11_RS14580;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AB11_RS14580;old_locus_tag=AB11_2673 NZ_JHDH01000132.1 Protein Homology CDS 26472 26714 . - 0 ID=cds-WP_001705277.1;Parent=gene-AB11_RS14580;Dbxref=GenBank:WP_001705277.1;Name=WP_001705277.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416878.1;locus_tag=AB11_RS14580;product=YfdY family protein;protein_id=WP_001705277.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 27067 27987 . + . ID=gene-AB11_RS14585;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AB11_RS14585;old_locus_tag=AB11_2674 NZ_JHDH01000132.1 Protein Homology CDS 27067 27987 . + 0 ID=cds-WP_032223691.1;Parent=gene-AB11_RS14585;Dbxref=GenBank:WP_032223691.1;Name=WP_032223691.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AB11_RS14585;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_032223691.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 28343 28414 . + . ID=gene-AB11_RS14590;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AB11_RS14590 NZ_JHDH01000132.1 Protein Homology CDS 28343 28414 . + 0 ID=cds-WP_010723117.1;Parent=gene-AB11_RS14590;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AB11_RS14590;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 28479 29717 . - . ID=gene-AB11_RS14595;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AB11_RS14595;old_locus_tag=AB11_2676 NZ_JHDH01000132.1 Protein Homology CDS 28479 29717 . - 0 ID=cds-WP_000785931.1;Parent=gene-AB11_RS14595;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AB11_RS14595;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 30093 31790 . + . ID=gene-AB11_RS14600;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AB11_RS14600;old_locus_tag=AB11_2677 NZ_JHDH01000132.1 Protein Homology CDS 30093 31790 . + 0 ID=cds-WP_000544359.1;Parent=gene-AB11_RS14600;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AB11_RS14600;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 31805 32539 . + . ID=gene-AB11_RS14605;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AB11_RS14605;old_locus_tag=AB11_2678 NZ_JHDH01000132.1 Protein Homology CDS 31805 32539 . + 0 ID=cds-WP_001295458.1;Parent=gene-AB11_RS14605;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AB11_RS14605;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 32552 33409 . + . ID=gene-AB11_RS14610;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AB11_RS14610;old_locus_tag=AB11_2679 NZ_JHDH01000132.1 Protein Homology CDS 32552 33409 . + 0 ID=cds-WP_000646835.1;Parent=gene-AB11_RS14610;Dbxref=GenBank:WP_000646835.1;Name=WP_000646835.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AB11_RS14610;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 33412 35901 . - . ID=gene-AB11_RS14615;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB11_RS14615;old_locus_tag=AB11_2680 NZ_JHDH01000132.1 Protein Homology CDS 33412 35901 . - 0 ID=cds-WP_032223694.1;Parent=gene-AB11_RS14615;Dbxref=GenBank:WP_032223694.1;Name=WP_032223694.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AB11_RS14615;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032223694.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 35926 36963 . - . ID=gene-AB11_RS14620;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AB11_RS14620;old_locus_tag=AB11_2681 NZ_JHDH01000132.1 Protein Homology CDS 35926 36963 . - 0 ID=cds-WP_000366028.1;Parent=gene-AB11_RS14620;Dbxref=GenBank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AB11_RS14620;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 36963 38048 . - . ID=gene-AB11_RS14625;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AB11_RS14625;old_locus_tag=AB11_2682 NZ_JHDH01000132.1 Protein Homology CDS 36963 38048 . - 0 ID=cds-WP_000173291.1;Parent=gene-AB11_RS14625;Dbxref=GenBank:WP_000173291.1;Name=WP_000173291.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AB11_RS14625;product=aminopeptidase;protein_id=WP_000173291.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 38063 39310 . - . ID=gene-AB11_RS14630;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AB11_RS14630;old_locus_tag=AB11_2683 NZ_JHDH01000132.1 Protein Homology CDS 38063 39310 . - 0 ID=cds-WP_000985359.1;Parent=gene-AB11_RS14630;Dbxref=GenBank:WP_000985359.1;Name=WP_000985359.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AB11_RS14630;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 39332 39658 . - . ID=gene-AB11_RS14635;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AB11_RS14635;old_locus_tag=AB11_2684 NZ_JHDH01000132.1 Protein Homology CDS 39332 39658 . - 0 ID=cds-WP_000038456.1;Parent=gene-AB11_RS14635;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AB11_RS14635;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 39877 40842 . - . ID=gene-AB11_RS14640;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AB11_RS14640;old_locus_tag=AB11_2685 NZ_JHDH01000132.1 Protein Homology CDS 39877 40842 . - 0 ID=cds-WP_000170346.1;Parent=gene-AB11_RS14640;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AB11_RS14640;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 41046 42302 . + . ID=gene-AB11_RS14645;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AB11_RS14645;old_locus_tag=AB11_2686 NZ_JHDH01000132.1 Protein Homology CDS 41046 42302 . + 0 ID=cds-WP_000903148.1;Parent=gene-AB11_RS14645;Dbxref=GenBank:WP_000903148.1;Name=WP_000903148.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AB11_RS14645;product=ion channel protein;protein_id=WP_000903148.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 42417 42743 . + . ID=gene-AB11_RS14650;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AB11_RS14650;old_locus_tag=AB11_2687 NZ_JHDH01000132.1 Protein Homology CDS 42417 42743 . + 0 ID=cds-WP_000490072.1;Parent=gene-AB11_RS14650;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AB11_RS14650;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 42884 44122 . - . ID=gene-AB11_RS14655;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AB11_RS14655;old_locus_tag=AB11_2688 NZ_JHDH01000132.1 Protein Homology CDS 42884 44122 . - 0 ID=cds-WP_000186369.1;Parent=gene-AB11_RS14655;Dbxref=GenBank:WP_000186369.1;Name=WP_000186369.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AB11_RS14655;product=Nramp family divalent metal transporter;protein_id=WP_000186369.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 44103 44192 . - . ID=gene-AB11_RS26245;Name=AB11_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26245 NZ_JHDH01000132.1 Protein Homology CDS 44103 44192 . - 0 ID=cds-WP_240811045.1;Parent=gene-AB11_RS26245;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AB11_RS26245;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 44458 45660 . + . ID=gene-AB11_RS14660;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AB11_RS14660;old_locus_tag=AB11_2689 NZ_JHDH01000132.1 Protein Homology CDS 44458 45660 . + 0 ID=cds-WP_000376337.1;Parent=gene-AB11_RS14660;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AB11_RS14660;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JHDH01000132.1 RefSeq gene 45863 46975 . - . ID=gene-AB11_RS14665;Name=AB11_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14665;old_locus_tag=AB11_2690 NZ_JHDH01000132.1 Protein Homology CDS 45863 46975 . - 0 ID=cds-WP_032222612.1-6;Parent=gene-AB11_RS14665;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS14665;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ##sequence-region NZ_JHDH01000133.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000133.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000133.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000133.1 RefSeq gene 1 348 . - . ID=gene-AB11_RS14670;Name=AB11_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14670;old_locus_tag=AB11_2691;partial=true;start_range=.,1 NZ_JHDH01000133.1 Protein Homology CDS 1 348 . - 0 ID=cds-WP_001467393.1;Parent=gene-AB11_RS14670;Dbxref=GenBank:WP_001467393.1;Name=WP_001467393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AB11_RS14670;partial=true;product=MASE1 domain-containing protein;protein_id=WP_001467393.1;start_range=.,1;transl_table=11 NZ_JHDH01000133.1 RefSeq gene 557 632 . - . ID=gene-AB11_RS14675;Name=AB11_RS14675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14675;old_locus_tag=AB11_2692 NZ_JHDH01000133.1 tRNAscan-SE tRNA 557 632 . - . ID=rna-AB11_RS14675;Parent=gene-AB11_RS14675;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14675;product=tRNA-Ala NZ_JHDH01000133.1 tRNAscan-SE exon 557 632 . - . ID=exon-AB11_RS14675-1;Parent=rna-AB11_RS14675;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14675;product=tRNA-Ala NZ_JHDH01000133.1 RefSeq gene 853 1212 . + . ID=gene-AB11_RS14680;Name=AB11_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14680;old_locus_tag=AB11_2693 NZ_JHDH01000133.1 Protein Homology CDS 853 1212 . + 0 ID=cds-WP_000472021.1-2;Parent=gene-AB11_RS14680;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB11_RS14680;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDH01000133.1 RefSeq gene 1214 1606 . + . ID=gene-AB11_RS14685;Name=AB11_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14685;old_locus_tag=AB11_2694 NZ_JHDH01000133.1 Protein Homology CDS 1214 1606 . + 0 ID=cds-WP_000826503.1-2;Parent=gene-AB11_RS14685;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB11_RS14685;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDH01000133.1 RefSeq pseudogene 1658 2047 . - . ID=gene-AB11_RS14690;Name=gltX;end_range=2047,.;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=AB11_RS14690;old_locus_tag=AB11_2695;partial=true;pseudo=true NZ_JHDH01000133.1 Protein Homology CDS 1658 2047 . - 0 ID=cds-AB11_RS14690;Parent=gene-AB11_RS14690;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB11_RS14690;partial=true;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000134.1 1 2048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000134.1 RefSeq region 1 2048 . + . ID=NZ_JHDH01000134.1:1..2048;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000134.1 RefSeq gene 93 168 . + . ID=gene-AB11_RS14695;Name=AB11_RS14695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14695;old_locus_tag=AB11_2696 NZ_JHDH01000134.1 tRNAscan-SE tRNA 93 168 . + . ID=rna-AB11_RS14695;Parent=gene-AB11_RS14695;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14695;product=tRNA-Val NZ_JHDH01000134.1 tRNAscan-SE exon 93 168 . + . ID=exon-AB11_RS14695-1;Parent=rna-AB11_RS14695;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14695;product=tRNA-Val NZ_JHDH01000134.1 RefSeq gene 172 247 . + . ID=gene-AB11_RS14700;Name=AB11_RS14700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14700;old_locus_tag=AB11_2697 NZ_JHDH01000134.1 tRNAscan-SE tRNA 172 247 . + . ID=rna-AB11_RS14700;Parent=gene-AB11_RS14700;anticodon=(pos:205..207);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14700;product=tRNA-Lys NZ_JHDH01000134.1 tRNAscan-SE exon 172 247 . + . ID=exon-AB11_RS14700-1;Parent=rna-AB11_RS14700;anticodon=(pos:205..207);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14700;product=tRNA-Lys NZ_JHDH01000134.1 RefSeq gene 278 403 . + . ID=gene-AB11_RS14705;Name=AB11_RS14705;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS14705 NZ_JHDH01000134.1 cmsearch ncRNA 278 403 . + . ID=rna-AB11_RS14705;Parent=gene-AB11_RS14705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14705;product=RtT sRNA NZ_JHDH01000134.1 cmsearch exon 278 403 . + . ID=exon-AB11_RS14705-1;Parent=rna-AB11_RS14705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14705;product=RtT sRNA NZ_JHDH01000134.1 RefSeq gene 512 1396 . - . ID=gene-AB11_RS14710;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AB11_RS14710;old_locus_tag=AB11_2698 NZ_JHDH01000134.1 Protein Homology CDS 512 1396 . - 0 ID=cds-WP_000442949.1;Parent=gene-AB11_RS14710;Dbxref=GenBank:WP_000442949.1;Name=WP_000442949.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AB11_RS14710;product=DNA-binding transcriptional regulator XapR;protein_id=WP_000442949.1;transl_table=11 NZ_JHDH01000134.1 RefSeq gene 1437 1595 . - . ID=gene-AB11_RS14715;Name=AB11_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14715;old_locus_tag=AB11_2699 NZ_JHDH01000134.1 Protein Homology CDS 1437 1595 . - 0 ID=cds-WP_000651752.1;Parent=gene-AB11_RS14715;Dbxref=GenBank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AB11_RS14715;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JHDH01000134.1 RefSeq pseudogene 1648 2048 . - . ID=gene-AB11_RS14720;Name=xapB;end_range=2048,.;gbkey=Gene;gene=xapB;gene_biotype=pseudogene;locus_tag=AB11_RS14720;old_locus_tag=AB11_2700;partial=true;pseudo=true NZ_JHDH01000134.1 Protein Homology CDS 1648 2048 . - 2 ID=cds-AB11_RS14720;Parent=gene-AB11_RS14720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2048,.;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AB11_RS14720;partial=true;product=xanthosine/proton symporter XapB;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000135.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000135.1 RefSeq region 1 535 . + . ID=NZ_JHDH01000135.1:1..535;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000135.1 RefSeq gene 94 169 . + . ID=gene-AB11_RS14725;Name=AB11_RS14725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14725;old_locus_tag=AB11_2702 NZ_JHDH01000135.1 tRNAscan-SE tRNA 94 169 . + . ID=rna-AB11_RS14725;Parent=gene-AB11_RS14725;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14725;product=tRNA-Val NZ_JHDH01000135.1 tRNAscan-SE exon 94 169 . + . ID=exon-AB11_RS14725-1;Parent=rna-AB11_RS14725;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14725;product=tRNA-Val NZ_JHDH01000135.1 RefSeq gene 214 289 . + . ID=gene-AB11_RS14730;Name=AB11_RS14730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14730;old_locus_tag=AB11_2703 NZ_JHDH01000135.1 tRNAscan-SE tRNA 214 289 . + . ID=rna-AB11_RS14730;Parent=gene-AB11_RS14730;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14730;product=tRNA-Val NZ_JHDH01000135.1 tRNAscan-SE exon 214 289 . + . ID=exon-AB11_RS14730-1;Parent=rna-AB11_RS14730;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14730;product=tRNA-Val NZ_JHDH01000135.1 RefSeq gene 294 369 . + . ID=gene-AB11_RS14735;Name=AB11_RS14735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14735;old_locus_tag=AB11_2704 NZ_JHDH01000135.1 tRNAscan-SE tRNA 294 369 . + . ID=rna-AB11_RS14735;Parent=gene-AB11_RS14735;anticodon=(pos:327..329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14735;product=tRNA-Lys NZ_JHDH01000135.1 tRNAscan-SE exon 294 369 . + . ID=exon-AB11_RS14735-1;Parent=rna-AB11_RS14735;anticodon=(pos:327..329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14735;product=tRNA-Lys NZ_JHDH01000135.1 RefSeq gene 400 525 . + . ID=gene-AB11_RS14740;Name=AB11_RS14740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS14740 NZ_JHDH01000135.1 cmsearch ncRNA 400 525 . + . ID=rna-AB11_RS14740;Parent=gene-AB11_RS14740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14740;product=RtT sRNA NZ_JHDH01000135.1 cmsearch exon 400 525 . + . ID=exon-AB11_RS14740-1;Parent=rna-AB11_RS14740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14740;product=RtT sRNA ##sequence-region NZ_JHDH01000136.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000136.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000136.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000136.1 RefSeq gene 1 272 . - . ID=gene-AB11_RS14745;Name=AB11_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14745;old_locus_tag=AB11_2705;partial=true;start_range=.,1 NZ_JHDH01000136.1 Protein Homology CDS 1 272 . - 0 ID=cds-WP_032223713.1;Parent=gene-AB11_RS14745;Dbxref=GenBank:WP_032223713.1;Name=WP_032223713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB11_RS14745;partial=true;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_032223713.1;start_range=.,1;transl_table=11 NZ_JHDH01000136.1 RefSeq gene 384 872 . - . ID=gene-AB11_RS14750;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB11_RS14750;old_locus_tag=AB11_2706 NZ_JHDH01000136.1 Protein Homology CDS 384 872 . - 0 ID=cds-WP_001241357.1;Parent=gene-AB11_RS14750;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB11_RS14750;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JHDH01000136.1 RefSeq gene 1142 1882 . - . ID=gene-AB11_RS14755;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AB11_RS14755;old_locus_tag=AB11_2707 NZ_JHDH01000136.1 Protein Homology CDS 1142 1882 . - 0 ID=cds-WP_000940019.1;Parent=gene-AB11_RS14755;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AB11_RS14755;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 ##sequence-region NZ_JHDH01000137.1 1 205463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000137.1 RefSeq region 1 205463 . + . ID=NZ_JHDH01000137.1:1..205463;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000137.1 RefSeq gene 1 348 . - . ID=gene-AB11_RS14760;Name=AB11_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14760;old_locus_tag=AB11_2708;partial=true;start_range=.,1 NZ_JHDH01000137.1 Protein Homology CDS 1 348 . - 0 ID=cds-WP_001467393.1-2;Parent=gene-AB11_RS14760;Dbxref=GenBank:WP_001467393.1;Name=WP_001467393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AB11_RS14760;partial=true;product=MASE1 domain-containing protein;protein_id=WP_001467393.1;start_range=.,1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 557 632 . - . ID=gene-AB11_RS14765;Name=AB11_RS14765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14765;old_locus_tag=AB11_2709 NZ_JHDH01000137.1 tRNAscan-SE tRNA 557 632 . - . ID=rna-AB11_RS14765;Parent=gene-AB11_RS14765;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14765;product=tRNA-Ala NZ_JHDH01000137.1 tRNAscan-SE exon 557 632 . - . ID=exon-AB11_RS14765-1;Parent=rna-AB11_RS14765;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14765;product=tRNA-Ala NZ_JHDH01000137.1 RefSeq gene 672 747 . - . ID=gene-AB11_RS14770;Name=AB11_RS14770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14770;old_locus_tag=AB11_2710 NZ_JHDH01000137.1 tRNAscan-SE tRNA 672 747 . - . ID=rna-AB11_RS14770;Parent=gene-AB11_RS14770;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14770;product=tRNA-Ala NZ_JHDH01000137.1 tRNAscan-SE exon 672 747 . - . ID=exon-AB11_RS14770-1;Parent=rna-AB11_RS14770;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14770;product=tRNA-Ala NZ_JHDH01000137.1 RefSeq gene 787 862 . - . ID=gene-AB11_RS14775;Name=AB11_RS14775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14775;old_locus_tag=AB11_2711 NZ_JHDH01000137.1 tRNAscan-SE tRNA 787 862 . - . ID=rna-AB11_RS14775;Parent=gene-AB11_RS14775;anticodon=(pos:complement(827..829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14775;product=tRNA-Ala NZ_JHDH01000137.1 tRNAscan-SE exon 787 862 . - . ID=exon-AB11_RS14775-1;Parent=rna-AB11_RS14775;anticodon=(pos:complement(827..829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14775;product=tRNA-Ala NZ_JHDH01000137.1 RefSeq gene 902 977 . - . ID=gene-AB11_RS14780;Name=AB11_RS14780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14780;old_locus_tag=AB11_2712 NZ_JHDH01000137.1 tRNAscan-SE tRNA 902 977 . - . ID=rna-AB11_RS14780;Parent=gene-AB11_RS14780;anticodon=(pos:complement(942..944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14780;product=tRNA-Ala NZ_JHDH01000137.1 tRNAscan-SE exon 902 977 . - . ID=exon-AB11_RS14780-1;Parent=rna-AB11_RS14780;anticodon=(pos:complement(942..944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14780;product=tRNA-Ala NZ_JHDH01000137.1 RefSeq gene 1198 1557 . + . ID=gene-AB11_RS14785;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AB11_RS14785;old_locus_tag=AB11_2713 NZ_JHDH01000137.1 Protein Homology CDS 1198 1557 . + 0 ID=cds-WP_000472021.1-3;Parent=gene-AB11_RS14785;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB11_RS14785;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 1559 1951 . + . ID=gene-AB11_RS14790;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AB11_RS14790;old_locus_tag=AB11_2714 NZ_JHDH01000137.1 Protein Homology CDS 1559 1951 . + 0 ID=cds-WP_000826503.1-3;Parent=gene-AB11_RS14790;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB11_RS14790;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 2003 3418 . - . ID=gene-AB11_RS14795;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AB11_RS14795;old_locus_tag=AB11_2715 NZ_JHDH01000137.1 Protein Homology CDS 2003 3418 . - 0 ID=cds-WP_000695655.1;Parent=gene-AB11_RS14795;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB11_RS14795;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 3677 3752 . + . ID=gene-AB11_RS14800;Name=AB11_RS14800;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14800;old_locus_tag=AB11_2717 NZ_JHDH01000137.1 tRNAscan-SE tRNA 3677 3752 . + . ID=rna-AB11_RS14800;Parent=gene-AB11_RS14800;anticodon=(pos:3710..3712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14800;product=tRNA-Val NZ_JHDH01000137.1 tRNAscan-SE exon 3677 3752 . + . ID=exon-AB11_RS14800-1;Parent=rna-AB11_RS14800;anticodon=(pos:3710..3712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14800;product=tRNA-Val NZ_JHDH01000137.1 RefSeq gene 3758 3833 . + . ID=gene-AB11_RS14805;Name=AB11_RS14805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14805;old_locus_tag=AB11_2718 NZ_JHDH01000137.1 tRNAscan-SE tRNA 3758 3833 . + . ID=rna-AB11_RS14805;Parent=gene-AB11_RS14805;anticodon=(pos:3791..3793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14805;product=tRNA-Val NZ_JHDH01000137.1 tRNAscan-SE exon 3758 3833 . + . ID=exon-AB11_RS14805-1;Parent=rna-AB11_RS14805;anticodon=(pos:3791..3793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14805;product=tRNA-Val NZ_JHDH01000137.1 RefSeq gene 3880 3955 . + . ID=gene-AB11_RS14810;Name=AB11_RS14810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14810;old_locus_tag=AB11_2719 NZ_JHDH01000137.1 tRNAscan-SE tRNA 3880 3955 . + . ID=rna-AB11_RS14810;Parent=gene-AB11_RS14810;anticodon=(pos:3913..3915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14810;product=tRNA-Val NZ_JHDH01000137.1 tRNAscan-SE exon 3880 3955 . + . ID=exon-AB11_RS14810-1;Parent=rna-AB11_RS14810;anticodon=(pos:3913..3915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14810;product=tRNA-Val NZ_JHDH01000137.1 RefSeq gene 3960 4035 . + . ID=gene-AB11_RS14815;Name=AB11_RS14815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS14815;old_locus_tag=AB11_2720 NZ_JHDH01000137.1 tRNAscan-SE tRNA 3960 4035 . + . ID=rna-AB11_RS14815;Parent=gene-AB11_RS14815;anticodon=(pos:3993..3995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14815;product=tRNA-Lys NZ_JHDH01000137.1 tRNAscan-SE exon 3960 4035 . + . ID=exon-AB11_RS14815-1;Parent=rna-AB11_RS14815;anticodon=(pos:3993..3995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS14815;product=tRNA-Lys NZ_JHDH01000137.1 RefSeq gene 4066 4191 . + . ID=gene-AB11_RS14820;Name=AB11_RS14820;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS14820 NZ_JHDH01000137.1 cmsearch ncRNA 4066 4191 . + . ID=rna-AB11_RS14820;Parent=gene-AB11_RS14820;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14820;product=RtT sRNA NZ_JHDH01000137.1 cmsearch exon 4066 4191 . + . ID=exon-AB11_RS14820-1;Parent=rna-AB11_RS14820;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14820;product=RtT sRNA NZ_JHDH01000137.1 RefSeq gene 4222 4347 . + . ID=gene-AB11_RS14825;Name=AB11_RS14825;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB11_RS14825 NZ_JHDH01000137.1 cmsearch ncRNA 4222 4347 . + . ID=rna-AB11_RS14825;Parent=gene-AB11_RS14825;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14825;product=RtT sRNA NZ_JHDH01000137.1 cmsearch exon 4222 4347 . + . ID=exon-AB11_RS14825-1;Parent=rna-AB11_RS14825;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS14825;product=RtT sRNA NZ_JHDH01000137.1 RefSeq gene 4456 5340 . - . ID=gene-AB11_RS14830;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AB11_RS14830;old_locus_tag=AB11_2721 NZ_JHDH01000137.1 Protein Homology CDS 4456 5340 . - 0 ID=cds-WP_000442949.1-2;Parent=gene-AB11_RS14830;Dbxref=GenBank:WP_000442949.1;Name=WP_000442949.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AB11_RS14830;product=DNA-binding transcriptional regulator XapR;protein_id=WP_000442949.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 5381 5539 . - . ID=gene-AB11_RS14835;Name=AB11_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS14835;old_locus_tag=AB11_2722 NZ_JHDH01000137.1 Protein Homology CDS 5381 5539 . - 0 ID=cds-WP_000651752.1-2;Parent=gene-AB11_RS14835;Dbxref=GenBank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AB11_RS14835;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 5592 6848 . - . ID=gene-AB11_RS14840;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AB11_RS14840;old_locus_tag=AB11_2723 NZ_JHDH01000137.1 Protein Homology CDS 5592 6848 . - 0 ID=cds-WP_000020402.1;Parent=gene-AB11_RS14840;Dbxref=GenBank:WP_000020402.1;Name=WP_000020402.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AB11_RS14840;product=xanthosine/proton symporter XapB;protein_id=WP_000020402.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 6908 7741 . - . ID=gene-AB11_RS14845;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AB11_RS14845;old_locus_tag=AB11_2724 NZ_JHDH01000137.1 Protein Homology CDS 6908 7741 . - 0 ID=cds-WP_021570900.1;Parent=gene-AB11_RS14845;Dbxref=GenBank:WP_021570900.1;Name=WP_021570900.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AB11_RS14845;product=xanthosine phosphorylase;protein_id=WP_021570900.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 7990 8754 . + . ID=gene-AB11_RS14850;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=AB11_RS14850;old_locus_tag=AB11_2725 NZ_JHDH01000137.1 Protein Homology CDS 7990 8754 . + 0 ID=cds-WP_000716421.1;Parent=gene-AB11_RS14850;Dbxref=GenBank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;gene=yfeN;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AB11_RS14850;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_000716421.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 8793 9719 . - . ID=gene-AB11_RS14855;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AB11_RS14855;old_locus_tag=AB11_2726 NZ_JHDH01000137.1 Protein Homology CDS 8793 9719 . - 0 ID=cds-WP_001109794.1;Parent=gene-AB11_RS14855;Dbxref=GenBank:WP_001109794.1;Name=WP_001109794.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AB11_RS14855;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 9809 10807 . + . ID=gene-AB11_RS14860;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AB11_RS14860;old_locus_tag=AB11_2727 NZ_JHDH01000137.1 Protein Homology CDS 9809 10807 . + 0 ID=cds-WP_000765610.1;Parent=gene-AB11_RS14860;Dbxref=GenBank:WP_000765610.1;Name=WP_000765610.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416905.1;locus_tag=AB11_RS14860;product=bile acid:sodium symporter family protein;protein_id=WP_000765610.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 10804 11022 . - . ID=gene-AB11_RS14865;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AB11_RS14865;old_locus_tag=AB11_2728 NZ_JHDH01000137.1 Protein Homology CDS 10804 11022 . - 0 ID=cds-WP_000410201.1;Parent=gene-AB11_RS14865;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AB11_RS14865;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 11024 13039 . - . ID=gene-AB11_RS14870;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AB11_RS14870;old_locus_tag=AB11_2729 NZ_JHDH01000137.1 Protein Homology CDS 11024 13039 . - 0 ID=cds-WP_000443661.1;Parent=gene-AB11_RS14870;Dbxref=GenBank:WP_000443661.1;Name=WP_000443661.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AB11_RS14870;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443661.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 13110 14096 . - . ID=gene-AB11_RS14875;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AB11_RS14875;old_locus_tag=AB11_2730 NZ_JHDH01000137.1 Protein Homology CDS 13110 14096 . - 0 ID=cds-WP_001300494.1;Parent=gene-AB11_RS14875;Dbxref=GenBank:WP_001300494.1;Name=WP_001300494.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416907.1;locus_tag=AB11_RS14875;product=cell division protein ZipA;protein_id=WP_001300494.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 14326 15087 . + . ID=gene-AB11_RS14880;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AB11_RS14880;old_locus_tag=AB11_2731 NZ_JHDH01000137.1 Protein Homology CDS 14326 15087 . + 0 ID=cds-WP_000254839.1;Parent=gene-AB11_RS14880;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AB11_RS14880;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 15272 16243 . + . ID=gene-AB11_RS14885;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AB11_RS14885;old_locus_tag=AB11_2732 NZ_JHDH01000137.1 Protein Homology CDS 15272 16243 . + 0 ID=cds-WP_000034402.1;Parent=gene-AB11_RS14885;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AB11_RS14885;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 16627 16884 . + . ID=gene-AB11_RS14890;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AB11_RS14890;old_locus_tag=AB11_2733 NZ_JHDH01000137.1 Protein Homology CDS 16627 16884 . + 0 ID=cds-WP_000487600.1;Parent=gene-AB11_RS14890;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AB11_RS14890;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 16929 18656 . + . ID=gene-AB11_RS14895;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AB11_RS14895;old_locus_tag=AB11_2734 NZ_JHDH01000137.1 Protein Homology CDS 16929 18656 . + 0 ID=cds-WP_032223718.1;Parent=gene-AB11_RS14895;Dbxref=GenBank:WP_032223718.1;Name=WP_032223718.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=AB11_RS14895;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_032223718.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 18697 19206 . + . ID=gene-AB11_RS14900;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AB11_RS14900;old_locus_tag=AB11_2735 NZ_JHDH01000137.1 Protein Homology CDS 18697 19206 . + 0 ID=cds-WP_000522247.1;Parent=gene-AB11_RS14900;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AB11_RS14900;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 19249 20100 . - . ID=gene-AB11_RS14905;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AB11_RS14905;old_locus_tag=AB11_2736 NZ_JHDH01000137.1 Protein Homology CDS 19249 20100 . - 0 ID=cds-WP_000096674.1;Parent=gene-AB11_RS14905;Dbxref=GenBank:WP_000096674.1;Name=WP_000096674.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AB11_RS14905;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 20205 20579 . + . ID=gene-AB11_RS14910;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AB11_RS14910;old_locus_tag=AB11_2737 NZ_JHDH01000137.1 Protein Homology CDS 20205 20579 . + 0 ID=cds-WP_000719962.1;Parent=gene-AB11_RS14910;Dbxref=GenBank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416914.1;locus_tag=AB11_RS14910;product=YfeK family protein;protein_id=WP_000719962.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 20612 21346 . + . ID=gene-AB11_RS14915;Name=yfeS;gbkey=Gene;gene=yfeS;gene_biotype=protein_coding;locus_tag=AB11_RS14915;old_locus_tag=AB11_2738 NZ_JHDH01000137.1 Protein Homology CDS 20612 21346 . + 0 ID=cds-WP_000745534.1;Parent=gene-AB11_RS14915;Dbxref=GenBank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;gene=yfeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416915.1;locus_tag=AB11_RS14915;product=WGR domain-containing protein;protein_id=WP_000745534.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 21535 22446 . - . ID=gene-AB11_RS14920;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AB11_RS14920;old_locus_tag=AB11_2739 NZ_JHDH01000137.1 Protein Homology CDS 21535 22446 . - 0 ID=cds-WP_001336044.1;Parent=gene-AB11_RS14920;Dbxref=GenBank:WP_001336044.1;Name=WP_001336044.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AB11_RS14920;product=cysteine synthase B;protein_id=WP_001336044.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 22580 23677 . - . ID=gene-AB11_RS14925;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AB11_RS14925;old_locus_tag=AB11_2740 NZ_JHDH01000137.1 Protein Homology CDS 22580 23677 . - 0 ID=cds-WP_000021036.1;Parent=gene-AB11_RS14925;Dbxref=GenBank:WP_000021036.1;Name=WP_000021036.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AB11_RS14925;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021036.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 23667 24542 . - . ID=gene-AB11_RS14930;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AB11_RS14930;old_locus_tag=AB11_2741 NZ_JHDH01000137.1 Protein Homology CDS 23667 24542 . - 0 ID=cds-WP_000852686.1;Parent=gene-AB11_RS14930;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AB11_RS14930;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 24542 25375 . - . ID=gene-AB11_RS14935;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AB11_RS14935;old_locus_tag=AB11_2742 NZ_JHDH01000137.1 Protein Homology CDS 24542 25375 . - 0 ID=cds-WP_000458406.1;Parent=gene-AB11_RS14935;Dbxref=GenBank:WP_000458406.1;Name=WP_000458406.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AB11_RS14935;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458406.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 25375 26391 . - . ID=gene-AB11_RS14940;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AB11_RS14940;old_locus_tag=AB11_2743 NZ_JHDH01000137.1 Protein Homology CDS 25375 26391 . - 0 ID=cds-WP_000290230.1;Parent=gene-AB11_RS14940;Dbxref=GenBank:WP_000290230.1;Name=WP_000290230.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416920.1;locus_tag=AB11_RS14940;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290230.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 26695 27486 . - . ID=gene-AB11_RS14945;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AB11_RS14945;old_locus_tag=AB11_2744 NZ_JHDH01000137.1 Protein Homology CDS 26695 27486 . - 0 ID=cds-WP_000517431.1;Parent=gene-AB11_RS14945;Dbxref=GenBank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AB11_RS14945;product=SDR family oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 27615 28472 . - . ID=gene-AB11_RS14950;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AB11_RS14950;old_locus_tag=AB11_2745 NZ_JHDH01000137.1 Protein Homology CDS 27615 28472 . - 0 ID=cds-WP_000966470.1;Parent=gene-AB11_RS14950;Dbxref=GenBank:WP_000966470.1;Name=WP_000966470.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AB11_RS14950;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966470.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 28636 29532 . + . ID=gene-AB11_RS14955;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AB11_RS14955;old_locus_tag=AB11_2746 NZ_JHDH01000137.1 Protein Homology CDS 28636 29532 . + 0 ID=cds-WP_001159160.1;Parent=gene-AB11_RS14955;Dbxref=GenBank:WP_001159160.1;Name=WP_001159160.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AB11_RS14955;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001159160.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 29536 30960 . + . ID=gene-AB11_RS14960;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AB11_RS14960;old_locus_tag=AB11_2747 NZ_JHDH01000137.1 Protein Homology CDS 29536 30960 . + 0 ID=cds-WP_001040483.1;Parent=gene-AB11_RS14960;Dbxref=GenBank:WP_001040483.1;Name=WP_001040483.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AB11_RS14960;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 30965 32269 . + . ID=gene-AB11_RS14965;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AB11_RS14965;old_locus_tag=AB11_2748 NZ_JHDH01000137.1 Protein Homology CDS 30965 32269 . + 0 ID=cds-WP_001327042.1;Parent=gene-AB11_RS14965;Dbxref=GenBank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416925.2;locus_tag=AB11_RS14965;product=penicillin binding protein PBP4B;protein_id=WP_001327042.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 32509 33408 . - . ID=gene-AB11_RS14970;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AB11_RS14970;old_locus_tag=AB11_2749 NZ_JHDH01000137.1 Protein Homology CDS 32509 33408 . - 0 ID=cds-WP_000084590.1;Parent=gene-AB11_RS14970;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AB11_RS14970;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 33504 34079 . - . ID=gene-AB11_RS14975;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AB11_RS14975;old_locus_tag=AB11_2750 NZ_JHDH01000137.1 Protein Homology CDS 33504 34079 . - 0 ID=cds-WP_000838944.1;Parent=gene-AB11_RS14975;Dbxref=GenBank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AB11_RS14975;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 34140 34589 . - . ID=gene-AB11_RS14980;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AB11_RS14980;old_locus_tag=AB11_2751 NZ_JHDH01000137.1 Protein Homology CDS 34140 34589 . - 0 ID=cds-WP_000842944.1;Parent=gene-AB11_RS14980;Dbxref=GenBank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AB11_RS14980;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 34576 35001 . - . ID=gene-AB11_RS14985;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AB11_RS14985;old_locus_tag=AB11_2752 NZ_JHDH01000137.1 Protein Homology CDS 34576 35001 . - 0 ID=cds-WP_000405996.1;Parent=gene-AB11_RS14985;Dbxref=GenBank:WP_000405996.1;Name=WP_000405996.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416929.4;locus_tag=AB11_RS14985;product=GNAT family acetyltransferase;protein_id=WP_000405996.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 35215 36084 . + . ID=gene-AB11_RS14990;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AB11_RS14990;old_locus_tag=AB11_2753 NZ_JHDH01000137.1 Protein Homology CDS 35215 36084 . + 0 ID=cds-WP_000102886.1;Parent=gene-AB11_RS14990;Dbxref=GenBank:WP_000102886.1;Name=WP_000102886.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416930.1;locus_tag=AB11_RS14990;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102886.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 36088 36987 . + . ID=gene-AB11_RS14995;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AB11_RS14995;old_locus_tag=AB11_2754 NZ_JHDH01000137.1 Protein Homology CDS 36088 36987 . + 0 ID=cds-WP_032223721.1;Parent=gene-AB11_RS14995;Dbxref=GenBank:WP_032223721.1;Name=WP_032223721.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AB11_RS14995;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_032223721.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 36993 38045 . - . ID=gene-AB11_RS15000;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AB11_RS15000;old_locus_tag=AB11_2755 NZ_JHDH01000137.1 Protein Homology CDS 36993 38045 . - 0 ID=cds-WP_000753690.1;Parent=gene-AB11_RS15000;Dbxref=GenBank:WP_000753690.1;Name=WP_000753690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416932.1;locus_tag=AB11_RS15000;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753690.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 38091 38591 . - . ID=gene-AB11_RS15005;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AB11_RS15005;old_locus_tag=AB11_2756 NZ_JHDH01000137.1 Protein Homology CDS 38091 38591 . - 0 ID=cds-WP_000606257.1;Parent=gene-AB11_RS15005;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AB11_RS15005;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 38604 39263 . - . ID=gene-AB11_RS15010;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AB11_RS15010;old_locus_tag=AB11_2757 NZ_JHDH01000137.1 Protein Homology CDS 38604 39263 . - 0 ID=cds-WP_001111033.1;Parent=gene-AB11_RS15010;Dbxref=GenBank:WP_001111033.1;Name=WP_001111033.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AB11_RS15010;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111033.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 39273 40160 . - . ID=gene-AB11_RS15015;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AB11_RS15015;old_locus_tag=AB11_2758 NZ_JHDH01000137.1 Protein Homology CDS 39273 40160 . - 0 ID=cds-WP_000372364.1;Parent=gene-AB11_RS15015;Dbxref=GenBank:WP_000372364.1;Name=WP_000372364.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AB11_RS15015;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372364.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 40181 41542 . - . ID=gene-AB11_RS15020;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AB11_RS15020;old_locus_tag=AB11_2759 NZ_JHDH01000137.1 Protein Homology CDS 40181 41542 . - 0 ID=cds-WP_000769961.1;Parent=gene-AB11_RS15020;Dbxref=GenBank:WP_000769961.1;Name=WP_000769961.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AB11_RS15020;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769961.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 41554 42957 . - . ID=gene-AB11_RS15025;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AB11_RS15025;old_locus_tag=AB11_2760 NZ_JHDH01000137.1 Protein Homology CDS 41554 42957 . - 0 ID=cds-WP_001097542.1;Parent=gene-AB11_RS15025;Dbxref=GenBank:WP_001097542.1;Name=WP_001097542.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416946.1;locus_tag=AB11_RS15025;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097542.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 42954 44180 . - . ID=gene-AB11_RS15030;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AB11_RS15030;old_locus_tag=AB11_2761 NZ_JHDH01000137.1 Protein Homology CDS 42954 44180 . - 0 ID=cds-WP_001556152.1;Parent=gene-AB11_RS15030;Dbxref=GenBank:WP_001556152.1;Name=WP_001556152.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AB11_RS15030;product=ethanolamine utilization protein EutH;protein_id=WP_001556152.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 44497 45684 . - . ID=gene-AB11_RS15035;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AB11_RS15035;old_locus_tag=AB11_2763 NZ_JHDH01000137.1 Protein Homology CDS 44497 45684 . - 0 ID=cds-WP_001491243.1;Parent=gene-AB11_RS15035;Dbxref=GenBank:WP_001491243.1;Name=WP_001491243.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=AB11_RS15035;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001491243.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 45674 46510 . - . ID=gene-AB11_RS15040;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AB11_RS15040;old_locus_tag=AB11_2764 NZ_JHDH01000137.1 Protein Homology CDS 45674 46510 . - 0 ID=cds-WP_000929729.1;Parent=gene-AB11_RS15040;Dbxref=GenBank:WP_000929729.1;Name=WP_000929729.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AB11_RS15040;product=ethanolamine utilization protein EutJ;protein_id=WP_000929729.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 46521 47924 . - . ID=gene-AB11_RS15045;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AB11_RS15045;old_locus_tag=AB11_2765 NZ_JHDH01000137.1 Protein Homology CDS 46521 47924 . - 0 ID=cds-WP_001075716.1;Parent=gene-AB11_RS15045;Dbxref=GenBank:WP_001075716.1;Name=WP_001075716.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AB11_RS15045;product=aldehyde dehydrogenase family protein;protein_id=WP_001075716.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 47936 48223 . - . ID=gene-AB11_RS15050;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AB11_RS15050;old_locus_tag=AB11_2766 NZ_JHDH01000137.1 Protein Homology CDS 47936 48223 . - 0 ID=cds-WP_000762196.1;Parent=gene-AB11_RS15050;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AB11_RS15050;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 48330 48623 . - . ID=gene-AB11_RS15055;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AB11_RS15055;old_locus_tag=AB11_2767 NZ_JHDH01000137.1 Protein Homology CDS 48330 48623 . - 0 ID=cds-WP_000387713.1;Parent=gene-AB11_RS15055;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AB11_RS15055;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 48662 49678 . - . ID=gene-AB11_RS15060;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AB11_RS15060;old_locus_tag=AB11_2768 NZ_JHDH01000137.1 Protein Homology CDS 48662 49678 . - 0 ID=cds-WP_000582977.1;Parent=gene-AB11_RS15060;Dbxref=GenBank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AB11_RS15060;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 49675 50478 . - . ID=gene-AB11_RS15065;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AB11_RS15065;old_locus_tag=AB11_2769 NZ_JHDH01000137.1 Protein Homology CDS 49675 50478 . - 0 ID=cds-WP_000651295.1;Parent=gene-AB11_RS15065;Dbxref=GenBank:WP_000651295.1;Name=WP_000651295.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AB11_RS15065;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651295.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 50475 51176 . - . ID=gene-AB11_RS15070;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AB11_RS15070;old_locus_tag=AB11_2770 NZ_JHDH01000137.1 Protein Homology CDS 50475 51176 . - 0 ID=cds-WP_000733906.1;Parent=gene-AB11_RS15070;Dbxref=GenBank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AB11_RS15070;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 51151 51630 . - . ID=gene-AB11_RS15075;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AB11_RS15075;old_locus_tag=AB11_2771 NZ_JHDH01000137.1 Protein Homology CDS 51151 51630 . - 0 ID=cds-WP_000820762.1;Parent=gene-AB11_RS15075;Dbxref=GenBank:WP_000820762.1;Name=WP_000820762.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416956.1;locus_tag=AB11_RS15075;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820762.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 51643 51978 . - . ID=gene-AB11_RS15080;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AB11_RS15080;old_locus_tag=AB11_2772 NZ_JHDH01000137.1 Protein Homology CDS 51643 51978 . - 0 ID=cds-WP_001333989.1;Parent=gene-AB11_RS15080;Dbxref=GenBank:WP_001333989.1;Name=WP_001333989.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AB11_RS15080;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001333989.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 52271 54550 . - . ID=gene-AB11_RS15085;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AB11_RS15085;old_locus_tag=AB11_2773 NZ_JHDH01000137.1 Protein Homology CDS 52271 54550 . - 0 ID=cds-WP_000342642.1;Parent=gene-AB11_RS15085;Dbxref=GenBank:WP_000342642.1;Name=WP_000342642.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708302.1;locus_tag=AB11_RS15085;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342642.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 54839 55789 . + . ID=gene-AB11_RS15090;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB11_RS15090;old_locus_tag=AB11_2774 NZ_JHDH01000137.1 Protein Homology CDS 54839 55789 . + 0 ID=cds-WP_001003709.1;Parent=gene-AB11_RS15090;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AB11_RS15090;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 55809 57812 . + . ID=gene-AB11_RS15095;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB11_RS15095;old_locus_tag=AB11_2775 NZ_JHDH01000137.1 Protein Homology CDS 55809 57812 . + 0 ID=cds-WP_000087280.1;Parent=gene-AB11_RS15095;Dbxref=GenBank:WP_000087280.1;Name=WP_000087280.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AB11_RS15095;product=transketolase;protein_id=WP_000087280.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 57907 58950 . - . ID=gene-AB11_RS15100;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AB11_RS15100;old_locus_tag=AB11_2776 NZ_JHDH01000137.1 Protein Homology CDS 57907 58950 . - 0 ID=cds-WP_001270542.1;Parent=gene-AB11_RS15100;Dbxref=GenBank:WP_001270542.1;Name=WP_001270542.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=AB11_RS15100;product=DUF1176 domain-containing protein;protein_id=WP_001270542.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 59076 59651 . - . ID=gene-AB11_RS15105;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AB11_RS15105;old_locus_tag=AB11_2777 NZ_JHDH01000137.1 Protein Homology CDS 59076 59651 . - 0 ID=cds-WP_001300814.1;Parent=gene-AB11_RS15105;Dbxref=GenBank:WP_001300814.1;Name=WP_001300814.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416962.1;locus_tag=AB11_RS15105;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_001300814.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 59719 61698 . - . ID=gene-AB11_RS15110;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AB11_RS15110;old_locus_tag=AB11_2778 NZ_JHDH01000137.1 Protein Homology CDS 59719 61698 . - 0 ID=cds-WP_001078880.1;Parent=gene-AB11_RS15110;Dbxref=GenBank:WP_001078880.1;Name=WP_001078880.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AB11_RS15110;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078880.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 61904 63604 . + . ID=gene-AB11_RS15115;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AB11_RS15115;old_locus_tag=AB11_2779 NZ_JHDH01000137.1 Protein Homology CDS 61904 63604 . + 0 ID=cds-WP_001300881.1;Parent=gene-AB11_RS15115;Dbxref=GenBank:WP_001300881.1;Name=WP_001300881.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AB11_RS15115;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001300881.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 63768 66881 . + . ID=gene-AB11_RS15120;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AB11_RS15120;old_locus_tag=AB11_2780 NZ_JHDH01000137.1 Protein Homology CDS 63768 66881 . + 0 ID=cds-WP_001273151.1;Parent=gene-AB11_RS15120;Dbxref=GenBank:WP_001273151.1;Name=WP_001273151.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AB11_RS15120;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273151.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 66980 67039 . - . ID=gene-AB11_RS15125;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AB11_RS15125 NZ_JHDH01000137.1 Protein Homology CDS 66980 67039 . - 0 ID=cds-WP_001386977.1;Parent=gene-AB11_RS15125;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AB11_RS15125;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 67420 67776 . + . ID=gene-AB11_RS15130;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AB11_RS15130;old_locus_tag=AB11_2781 NZ_JHDH01000137.1 Protein Homology CDS 67420 67776 . + 0 ID=cds-WP_000258236.1;Parent=gene-AB11_RS15130;Dbxref=GenBank:WP_000258236.1;Name=WP_000258236.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416966.1;locus_tag=AB11_RS15130;product=ArsC family reductase;protein_id=WP_000258236.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 67780 68907 . + . ID=gene-AB11_RS15135;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AB11_RS15135;old_locus_tag=AB11_2782 NZ_JHDH01000137.1 Protein Homology CDS 67780 68907 . + 0 ID=cds-WP_001277801.1;Parent=gene-AB11_RS15135;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AB11_RS15135;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 68935 69135 . + . ID=gene-AB11_RS15140;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AB11_RS15140;old_locus_tag=AB11_2783 NZ_JHDH01000137.1 Protein Homology CDS 68935 69135 . + 0 ID=cds-WP_000383836.1;Parent=gene-AB11_RS15140;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AB11_RS15140;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 69245 69943 . - . ID=gene-AB11_RS15145;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AB11_RS15145;old_locus_tag=AB11_2784 NZ_JHDH01000137.1 Protein Homology CDS 69245 69943 . - 0 ID=cds-WP_000679799.1;Parent=gene-AB11_RS15145;Dbxref=GenBank:WP_000679799.1;Name=WP_000679799.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=AB11_RS15145;product=esterase;protein_id=WP_000679799.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 70017 72032 . - . ID=gene-AB11_RS15150;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AB11_RS15150;old_locus_tag=AB11_2785 NZ_JHDH01000137.1 Protein Homology CDS 70017 72032 . - 0 ID=cds-WP_000829360.1;Parent=gene-AB11_RS15150;Dbxref=GenBank:WP_000829360.1;Name=WP_000829360.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416969.1;locus_tag=AB11_RS15150;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_000829360.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 72047 72910 . - . ID=gene-AB11_RS15155;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AB11_RS15155;old_locus_tag=AB11_2786 NZ_JHDH01000137.1 Protein Homology CDS 72047 72910 . - 0 ID=cds-WP_001267498.1;Parent=gene-AB11_RS15155;Dbxref=GenBank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AB11_RS15155;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 73078 73791 . - . ID=gene-AB11_RS15160;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AB11_RS15160;old_locus_tag=AB11_2787 NZ_JHDH01000137.1 Protein Homology CDS 73078 73791 . - 0 ID=cds-WP_001295467.1;Parent=gene-AB11_RS15160;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AB11_RS15160;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 74004 75038 . - . ID=gene-AB11_RS15165;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AB11_RS15165;old_locus_tag=AB11_2788 NZ_JHDH01000137.1 Protein Homology CDS 74004 75038 . - 0 ID=cds-WP_001297320.1;Parent=gene-AB11_RS15165;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AB11_RS15165;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 75055 75933 . - . ID=gene-AB11_RS15170;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AB11_RS15170;old_locus_tag=AB11_2789 NZ_JHDH01000137.1 Protein Homology CDS 75055 75933 . - 0 ID=cds-WP_001295469.1;Parent=gene-AB11_RS15170;Dbxref=GenBank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AB11_RS15170;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 76079 76651 . + . ID=gene-AB11_RS15175;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AB11_RS15175;old_locus_tag=AB11_2790 NZ_JHDH01000137.1 Protein Homology CDS 76079 76651 . + 0 ID=cds-WP_000176187.1;Parent=gene-AB11_RS15175;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AB11_RS15175;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 76651 77121 . + . ID=gene-AB11_RS15180;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AB11_RS15180;old_locus_tag=AB11_2791 NZ_JHDH01000137.1 Protein Homology CDS 76651 77121 . + 0 ID=cds-WP_001068682.1;Parent=gene-AB11_RS15180;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AB11_RS15180;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 77374 77991 . + . ID=gene-AB11_RS15185;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AB11_RS15185;old_locus_tag=AB11_2792 NZ_JHDH01000137.1 Protein Homology CDS 77374 77991 . + 0 ID=cds-WP_001352202.1;Parent=gene-AB11_RS15185;Dbxref=GenBank:WP_001352202.1;Name=WP_001352202.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416976.4;locus_tag=AB11_RS15185;product=hydrogenase 4 subunit HyfA;protein_id=WP_001352202.1;transl_table=11 NZ_JHDH01000137.1 RefSeq pseudogene 77991 80008 . + . ID=gene-AB11_RS15190;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=pseudogene;locus_tag=AB11_RS15190;old_locus_tag=AB11_2794;pseudo=true NZ_JHDH01000137.1 Protein Homology CDS 77991 80008 . + 0 ID=cds-AB11_RS15190;Parent=gene-AB11_RS15190;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416977.1;locus_tag=AB11_RS15190;product=hydrogenase 4 subunit B;pseudo=true;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 80019 80966 . + . ID=gene-AB11_RS15195;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AB11_RS15195;old_locus_tag=AB11_2795 NZ_JHDH01000137.1 Protein Homology CDS 80019 80966 . + 0 ID=cds-WP_001311024.1;Parent=gene-AB11_RS15195;Dbxref=GenBank:WP_001311024.1;Name=WP_001311024.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416978.4;locus_tag=AB11_RS15195;product=hydrogenase 4 subunit HyfC;protein_id=WP_001311024.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 80983 82422 . + . ID=gene-AB11_RS15200;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=AB11_RS15200;old_locus_tag=AB11_2796 NZ_JHDH01000137.1 Protein Homology CDS 80983 82422 . + 0 ID=cds-WP_000429104.1;Parent=gene-AB11_RS15200;Dbxref=GenBank:WP_000429104.1;Name=WP_000429104.1;gbkey=CDS;gene=hyfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AB11_RS15200;product=hydrogenase 4 subunit HyfD;protein_id=WP_000429104.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 82434 83084 . + . ID=gene-AB11_RS15205;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AB11_RS15205;old_locus_tag=AB11_2797 NZ_JHDH01000137.1 Protein Homology CDS 82434 83084 . + 0 ID=cds-WP_000147987.1;Parent=gene-AB11_RS15205;Dbxref=GenBank:WP_000147987.1;Name=WP_000147987.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AB11_RS15205;product=hydrogenase 4 membrane subunit;protein_id=WP_000147987.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 83089 84669 . + . ID=gene-AB11_RS15210;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AB11_RS15210;old_locus_tag=AB11_2798 NZ_JHDH01000137.1 Protein Homology CDS 83089 84669 . + 0 ID=cds-WP_032223724.1;Parent=gene-AB11_RS15210;Dbxref=GenBank:WP_032223724.1;Name=WP_032223724.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416981.1;locus_tag=AB11_RS15210;product=hydrogenase 4 subunit F;protein_id=WP_032223724.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 84659 86326 . + . ID=gene-AB11_RS15215;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AB11_RS15215;old_locus_tag=AB11_2799 NZ_JHDH01000137.1 Protein Homology CDS 84659 86326 . + 0 ID=cds-WP_001102321.1;Parent=gene-AB11_RS15215;Dbxref=GenBank:WP_001102321.1;Name=WP_001102321.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AB11_RS15215;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102321.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 86336 86881 . + . ID=gene-AB11_RS15220;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AB11_RS15220;old_locus_tag=AB11_2800 NZ_JHDH01000137.1 Protein Homology CDS 86336 86881 . + 0 ID=cds-WP_000916055.1;Parent=gene-AB11_RS15220;Dbxref=GenBank:WP_000916055.1;Name=WP_000916055.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416983.1;locus_tag=AB11_RS15220;product=hydrogenase 4 subunit H;protein_id=WP_000916055.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 86878 87636 . + . ID=gene-AB11_RS15225;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AB11_RS15225;old_locus_tag=AB11_2801 NZ_JHDH01000137.1 Protein Homology CDS 86878 87636 . + 0 ID=cds-WP_000075558.1;Parent=gene-AB11_RS15225;Dbxref=GenBank:WP_000075558.1;Name=WP_000075558.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AB11_RS15225;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075558.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 87629 88042 . + . ID=gene-AB11_RS15230;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AB11_RS15230;old_locus_tag=AB11_2802 NZ_JHDH01000137.1 Protein Homology CDS 87629 88042 . + 0 ID=cds-WP_001326580.1;Parent=gene-AB11_RS15230;Dbxref=GenBank:WP_001326580.1;Name=WP_001326580.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AB11_RS15230;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_001326580.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 88072 90084 . + . ID=gene-AB11_RS15235;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AB11_RS15235;old_locus_tag=AB11_2803 NZ_JHDH01000137.1 Protein Homology CDS 88072 90084 . + 0 ID=cds-WP_001251544.1;Parent=gene-AB11_RS15235;Dbxref=GenBank:WP_001251544.1;Name=WP_001251544.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416986.4;locus_tag=AB11_RS15235;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251544.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 90106 90954 . + . ID=gene-AB11_RS15240;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AB11_RS15240;old_locus_tag=AB11_2804 NZ_JHDH01000137.1 Protein Homology CDS 90106 90954 . + 0 ID=cds-WP_001244734.1;Parent=gene-AB11_RS15240;Dbxref=GenBank:WP_001244734.1;Name=WP_001244734.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416987.1;locus_tag=AB11_RS15240;product=formate transporter FocB;protein_id=WP_001244734.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 90992 92053 . - . ID=gene-AB11_RS15245;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AB11_RS15245;old_locus_tag=AB11_2805 NZ_JHDH01000137.1 Protein Homology CDS 90992 92053 . - 0 ID=cds-WP_000892044.1;Parent=gene-AB11_RS15245;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AB11_RS15245;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 92266 93729 . + . ID=gene-AB11_RS15250;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AB11_RS15250;old_locus_tag=AB11_2806 NZ_JHDH01000137.1 Protein Homology CDS 92266 93729 . + 0 ID=cds-WP_000489667.1;Parent=gene-AB11_RS15250;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AB11_RS15250;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 93750 94109 . + . ID=gene-AB11_RS15255;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB11_RS15255;old_locus_tag=AB11_2807 NZ_JHDH01000137.1 Protein Homology CDS 93750 94109 . + 0 ID=cds-WP_000166446.1;Parent=gene-AB11_RS15255;Dbxref=GenBank:WP_000166446.1;Name=WP_000166446.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416990.1;locus_tag=AB11_RS15255;product=arsenate reductase (glutaredoxin);protein_id=WP_000166446.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 94247 94948 . - . ID=gene-AB11_RS15260;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AB11_RS15260;old_locus_tag=AB11_2808 NZ_JHDH01000137.1 Protein Homology CDS 94247 94948 . - 0 ID=cds-WP_001307333.1;Parent=gene-AB11_RS15260;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AB11_RS15260;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 95043 96332 . - . ID=gene-AB11_RS15265;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AB11_RS15265;old_locus_tag=AB11_2809 NZ_JHDH01000137.1 Protein Homology CDS 95043 96332 . - 0 ID=cds-WP_000198328.1;Parent=gene-AB11_RS15265;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AB11_RS15265;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 96418 97044 . - . ID=gene-AB11_RS15270;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AB11_RS15270;old_locus_tag=AB11_2810 NZ_JHDH01000137.1 Protein Homology CDS 96418 97044 . - 0 ID=cds-WP_001295473.1;Parent=gene-AB11_RS15270;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AB11_RS15270;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 97369 98406 . + . ID=gene-AB11_RS15275;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AB11_RS15275;old_locus_tag=AB11_2811 NZ_JHDH01000137.1 Protein Homology CDS 97369 98406 . + 0 ID=cds-WP_001336050.1;Parent=gene-AB11_RS15275;Dbxref=GenBank:WP_001336050.1;Name=WP_001336050.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416994.1;locus_tag=AB11_RS15275;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001336050.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 98406 99044 . + . ID=gene-AB11_RS15280;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AB11_RS15280;old_locus_tag=AB11_2812 NZ_JHDH01000137.1 Protein Homology CDS 98406 99044 . + 0 ID=cds-WP_001028612.1;Parent=gene-AB11_RS15280;Dbxref=GenBank:WP_001028612.1;Name=WP_001028612.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416995.1;locus_tag=AB11_RS15280;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028612.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 99216 101282 . + . ID=gene-AB11_RS15285;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AB11_RS15285;old_locus_tag=AB11_2813 NZ_JHDH01000137.1 Protein Homology CDS 99216 101282 . + 0 ID=cds-WP_001394601.1;Parent=gene-AB11_RS15285;Dbxref=GenBank:WP_001394601.1;Name=WP_001394601.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AB11_RS15285;product=polyphosphate kinase 1;protein_id=WP_001394601.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 101287 102828 . + . ID=gene-AB11_RS15290;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AB11_RS15290;old_locus_tag=AB11_2814 NZ_JHDH01000137.1 Protein Homology CDS 101287 102828 . + 0 ID=cds-WP_001121363.1;Parent=gene-AB11_RS15290;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AB11_RS15290;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 102867 105110 . - . ID=gene-AB11_RS15295;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AB11_RS15295;old_locus_tag=AB11_2815 NZ_JHDH01000137.1 Protein Homology CDS 102867 105110 . - 0 ID=cds-WP_000772731.1;Parent=gene-AB11_RS15295;Dbxref=GenBank:WP_000772731.1;Name=WP_000772731.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AB11_RS15295;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772731.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 105292 105444 . - . ID=gene-AB11_RS15300;Name=AB11_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS15300;old_locus_tag=AB11_2816 NZ_JHDH01000137.1 Protein Homology CDS 105292 105444 . - 0 ID=cds-WP_000017552.1;Parent=gene-AB11_RS15300;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AB11_RS15300;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 105462 105653 . + . ID=gene-AB11_RS15305;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AB11_RS15305;old_locus_tag=AB11_2817 NZ_JHDH01000137.1 Protein Homology CDS 105462 105653 . + 0 ID=cds-WP_000076001.1;Parent=gene-AB11_RS15305;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AB11_RS15305;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 105964 106482 . + . ID=gene-AB11_RS15310;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AB11_RS15310;old_locus_tag=AB11_2819 NZ_JHDH01000137.1 Protein Homology CDS 105964 106482 . + 0 ID=cds-WP_001295476.1;Parent=gene-AB11_RS15310;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AB11_RS15310;product=outer membrane lipoprotein;protein_id=WP_001295476.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 106498 107037 . + . ID=gene-AB11_RS15315;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AB11_RS15315;old_locus_tag=AB11_2820 NZ_JHDH01000137.1 Protein Homology CDS 106498 107037 . + 0 ID=cds-WP_000755173.1;Parent=gene-AB11_RS15315;Dbxref=GenBank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AB11_RS15315;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 107130 108707 . - . ID=gene-AB11_RS15320;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AB11_RS15320;old_locus_tag=AB11_2821 NZ_JHDH01000137.1 Protein Homology CDS 107130 108707 . - 0 ID=cds-WP_000138270.1;Parent=gene-AB11_RS15320;Dbxref=GenBank:WP_000138270.1;Name=WP_000138270.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AB11_RS15320;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 108776 110242 . - . ID=gene-AB11_RS15325;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AB11_RS15325;old_locus_tag=AB11_2822 NZ_JHDH01000137.1 Protein Homology CDS 108776 110242 . - 0 ID=cds-WP_001299507.1;Parent=gene-AB11_RS15325;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AB11_RS15325;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 110404 111774 . + . ID=gene-AB11_RS15330;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AB11_RS15330;old_locus_tag=AB11_2824 NZ_JHDH01000137.1 Protein Homology CDS 110404 111774 . + 0 ID=cds-WP_032223726.1;Parent=gene-AB11_RS15330;Dbxref=GenBank:WP_032223726.1;Name=WP_032223726.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AB11_RS15330;product=exodeoxyribonuclease VII large subunit;protein_id=WP_032223726.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 111771 111986 . - . ID=gene-AB11_RS15335;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AB11_RS15335;old_locus_tag=AB11_2825 NZ_JHDH01000137.1 Protein Homology CDS 111771 111986 . - 0 ID=cds-WP_001301158.1;Parent=gene-AB11_RS15335;Dbxref=GenBank:WP_001301158.1;Name=WP_001301158.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AB11_RS15335;product=zinc ribbon domain-containing protein;protein_id=WP_001301158.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 112056 113528 . - . ID=gene-AB11_RS15340;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AB11_RS15340;old_locus_tag=AB11_2826 NZ_JHDH01000137.1 Protein Homology CDS 112056 113528 . - 0 ID=cds-WP_000249410.1;Parent=gene-AB11_RS15340;Dbxref=GenBank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AB11_RS15340;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 113646 114824 . - . ID=gene-AB11_RS15345;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AB11_RS15345;old_locus_tag=AB11_2827 NZ_JHDH01000137.1 Protein Homology CDS 113646 114824 . - 0 ID=cds-WP_001177048.1;Parent=gene-AB11_RS15345;Dbxref=GenBank:WP_001177048.1;Name=WP_001177048.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AB11_RS15345;product=outer membrane protein assembly factor BamB;protein_id=WP_001177048.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 114835 115455 . - . ID=gene-AB11_RS15350;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AB11_RS15350;old_locus_tag=AB11_2828 NZ_JHDH01000137.1 Protein Homology CDS 114835 115455 . - 0 ID=cds-WP_000409205.1;Parent=gene-AB11_RS15350;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AB11_RS15350;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 115473 116747 . - . ID=gene-AB11_RS15355;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AB11_RS15355;old_locus_tag=AB11_2829 NZ_JHDH01000137.1 Protein Homology CDS 115473 116747 . - 0 ID=cds-WP_001107167.1;Parent=gene-AB11_RS15355;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AB11_RS15355;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 116858 117976 . - . ID=gene-AB11_RS15360;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AB11_RS15360;old_locus_tag=AB11_2830 NZ_JHDH01000137.1 Protein Homology CDS 116858 117976 . - 0 ID=cds-WP_000551807.1;Parent=gene-AB11_RS15360;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AB11_RS15360;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 118003 119016 . - . ID=gene-AB11_RS15365;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AB11_RS15365;old_locus_tag=AB11_2831 NZ_JHDH01000137.1 Protein Homology CDS 118003 119016 . - 0 ID=cds-WP_001090844.1;Parent=gene-AB11_RS15365;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AB11_RS15365;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 119301 120455 . - . ID=gene-AB11_RS15370;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AB11_RS15370;old_locus_tag=AB11_2832 NZ_JHDH01000137.1 Protein Homology CDS 119301 120455 . - 0 ID=cds-WP_000003317.1;Parent=gene-AB11_RS15370;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AB11_RS15370;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 120605 121036 . - . ID=gene-AB11_RS15375;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AB11_RS15375;old_locus_tag=AB11_2833 NZ_JHDH01000137.1 Protein Homology CDS 120605 121036 . - 0 ID=cds-WP_000963837.1;Parent=gene-AB11_RS15375;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AB11_RS15375;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 121185 123497 . - . ID=gene-AB11_RS15380;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AB11_RS15380;old_locus_tag=AB11_2834 NZ_JHDH01000137.1 Protein Homology CDS 121185 123497 . - 0 ID=cds-WP_001137675.1;Parent=gene-AB11_RS15380;Dbxref=GenBank:WP_001137675.1;Name=WP_001137675.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AB11_RS15380;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137675.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 123498 128459 . - . ID=gene-AB11_RS15385;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AB11_RS15385;old_locus_tag=AB11_2835 NZ_JHDH01000137.1 Protein Homology CDS 123498 128459 . - 0 ID=cds-WP_032223729.1;Parent=gene-AB11_RS15385;Dbxref=GenBank:WP_032223729.1;Name=WP_032223729.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AB11_RS15385;product=alpha2-macroglobulin;protein_id=WP_032223729.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 128666 129511 . + . ID=gene-AB11_RS15390;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AB11_RS15390;old_locus_tag=AB11_2836 NZ_JHDH01000137.1 Protein Homology CDS 128666 129511 . + 0 ID=cds-WP_032223732.1;Parent=gene-AB11_RS15390;Dbxref=GenBank:WP_032223732.1;Name=WP_032223732.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AB11_RS15390;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_032223732.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 130173 130298 . + . ID=gene-AB11_RS25615;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AB11_RS25615;old_locus_tag=AB11_2838 NZ_JHDH01000137.1 Protein Homology CDS 130173 130298 . + 0 ID=cds-WP_001380605.1;Parent=gene-AB11_RS25615;Dbxref=GenBank:WP_001380605.1;Name=WP_001380605.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AB11_RS25615;product=small toxic inner membrane protein TimP;protein_id=WP_001380605.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 130329 131105 . - . ID=gene-AB11_RS15395;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AB11_RS15395;old_locus_tag=AB11_2839 NZ_JHDH01000137.1 Protein Homology CDS 130329 131105 . - 0 ID=cds-WP_001295479.1;Parent=gene-AB11_RS15395;Dbxref=GenBank:WP_001295479.1;Name=WP_001295479.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AB11_RS15395;product=enhanced serine sensitivity protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 131247 132530 . - . ID=gene-AB11_RS15400;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AB11_RS15400;old_locus_tag=AB11_2840 NZ_JHDH01000137.1 Protein Homology CDS 131247 132530 . - 0 ID=cds-WP_000133592.1;Parent=gene-AB11_RS15400;Dbxref=GenBank:WP_000133592.1;Name=WP_000133592.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AB11_RS15400;product=aminopeptidase PepB;protein_id=WP_000133592.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 132708 132908 . - . ID=gene-AB11_RS15405;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AB11_RS15405;old_locus_tag=AB11_2841 NZ_JHDH01000137.1 Protein Homology CDS 132708 132908 . - 0 ID=cds-WP_000523616.1;Parent=gene-AB11_RS15405;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AB11_RS15405;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 132920 133255 . - . ID=gene-AB11_RS15410;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AB11_RS15410;old_locus_tag=AB11_2842 NZ_JHDH01000137.1 Protein Homology CDS 132920 133255 . - 0 ID=cds-WP_001124469.1;Parent=gene-AB11_RS15410;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AB11_RS15410;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 133257 135107 . - . ID=gene-AB11_RS15415;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AB11_RS15415;old_locus_tag=AB11_2843 NZ_JHDH01000137.1 Protein Homology CDS 133257 135107 . - 0 ID=cds-WP_001196613.1;Parent=gene-AB11_RS15415;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AB11_RS15415;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 135124 135639 . - . ID=gene-AB11_RS15420;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AB11_RS15420;old_locus_tag=AB11_2844 NZ_JHDH01000137.1 Protein Homology CDS 135124 135639 . - 0 ID=cds-WP_000384413.1;Parent=gene-AB11_RS15420;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AB11_RS15420;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 135735 136058 . - . ID=gene-AB11_RS15425;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AB11_RS15425;old_locus_tag=AB11_2846 NZ_JHDH01000137.1 Protein Homology CDS 135735 136058 . - 0 ID=cds-WP_000028953.1;Parent=gene-AB11_RS15425;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AB11_RS15425;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 136075 136461 . - . ID=gene-AB11_RS15430;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AB11_RS15430;old_locus_tag=AB11_2847 NZ_JHDH01000137.1 Protein Homology CDS 136075 136461 . - 0 ID=cds-WP_000331707.1;Parent=gene-AB11_RS15430;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AB11_RS15430;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 136489 137703 . - . ID=gene-AB11_RS15435;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AB11_RS15435;old_locus_tag=AB11_2848 NZ_JHDH01000137.1 Protein Homology CDS 136489 137703 . - 0 ID=cds-WP_001295373.1;Parent=gene-AB11_RS15435;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB11_RS15435;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 137815 138303 . - . ID=gene-AB11_RS15440;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB11_RS15440;old_locus_tag=AB11_2849 NZ_JHDH01000137.1 Protein Homology CDS 137815 138303 . - 0 ID=cds-WP_001241357.1-2;Parent=gene-AB11_RS15440;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB11_RS15440;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 138846 139586 . - . ID=gene-AB11_RS15445;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AB11_RS15445;old_locus_tag=AB11_2850 NZ_JHDH01000137.1 Protein Homology CDS 138846 139586 . - 0 ID=cds-WP_000940019.1-2;Parent=gene-AB11_RS15445;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AB11_RS15445;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 139705 140508 . + . ID=gene-AB11_RS15450;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AB11_RS15450;old_locus_tag=AB11_2851 NZ_JHDH01000137.1 Protein Homology CDS 139705 140508 . + 0 ID=cds-WP_000553451.1;Parent=gene-AB11_RS15450;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AB11_RS15450;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 140653 141507 . + . ID=gene-AB11_RS15455;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AB11_RS15455;old_locus_tag=AB11_2852 NZ_JHDH01000137.1 Protein Homology CDS 140653 141507 . + 0 ID=cds-WP_001297705.1;Parent=gene-AB11_RS15455;Dbxref=GenBank:WP_001297705.1;Name=WP_001297705.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417029.4;locus_tag=AB11_RS15455;product=alpha/beta hydrolase;protein_id=WP_001297705.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 141698 142978 . + . ID=gene-AB11_RS15460;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AB11_RS15460;old_locus_tag=AB11_2853 NZ_JHDH01000137.1 Protein Homology CDS 141698 142978 . + 0 ID=cds-WP_000982994.1;Parent=gene-AB11_RS15460;Dbxref=GenBank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AB11_RS15460;product=stationary phase inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 142970 144109 . - . ID=gene-AB11_RS15465;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AB11_RS15465;old_locus_tag=AB11_2854 NZ_JHDH01000137.1 Protein Homology CDS 142970 144109 . - 0 ID=cds-WP_000244193.1;Parent=gene-AB11_RS15465;Dbxref=GenBank:WP_000244193.1;Name=WP_000244193.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AB11_RS15465;product=3-phenylpropionate MFS transporter;protein_id=WP_000244193.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 144269 145159 . - . ID=gene-AB11_RS15470;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AB11_RS15470;old_locus_tag=AB11_2855 NZ_JHDH01000137.1 Protein Homology CDS 144269 145159 . - 0 ID=cds-WP_000423261.1;Parent=gene-AB11_RS15470;Dbxref=GenBank:WP_000423261.1;Name=WP_000423261.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417032.1;locus_tag=AB11_RS15470;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 145295 146656 . + . ID=gene-AB11_RS15475;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AB11_RS15475;old_locus_tag=AB11_2856 NZ_JHDH01000137.1 Protein Homology CDS 145295 146656 . + 0 ID=cds-WP_000211172.1;Parent=gene-AB11_RS15475;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AB11_RS15475;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 146653 147171 . + . ID=gene-AB11_RS15480;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AB11_RS15480;old_locus_tag=AB11_2857 NZ_JHDH01000137.1 Protein Homology CDS 146653 147171 . + 0 ID=cds-WP_001276072.1;Parent=gene-AB11_RS15480;Dbxref=GenBank:WP_001276072.1;Name=WP_001276072.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AB11_RS15480;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 147171 147491 . + . ID=gene-AB11_RS15485;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AB11_RS15485;old_locus_tag=AB11_2858 NZ_JHDH01000137.1 Protein Homology CDS 147171 147491 . + 0 ID=cds-WP_001080102.1;Parent=gene-AB11_RS15485;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AB11_RS15485;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 147488 148300 . + . ID=gene-AB11_RS15490;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AB11_RS15490;old_locus_tag=AB11_2859 NZ_JHDH01000137.1 Protein Homology CDS 147488 148300 . + 0 ID=cds-WP_001281379.1;Parent=gene-AB11_RS15490;Dbxref=GenBank:WP_001281379.1;Name=WP_001281379.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417036.1;locus_tag=AB11_RS15490;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281379.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 148310 149512 . + . ID=gene-AB11_RS15495;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AB11_RS15495;old_locus_tag=AB11_2860 NZ_JHDH01000137.1 Protein Homology CDS 148310 149512 . + 0 ID=cds-WP_021570907.1;Parent=gene-AB11_RS15495;Dbxref=GenBank:WP_021570907.1;Name=WP_021570907.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AB11_RS15495;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_021570907.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 149609 150031 . + . ID=gene-AB11_RS15500;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AB11_RS15500;old_locus_tag=AB11_2861 NZ_JHDH01000137.1 Protein Homology CDS 149609 150031 . + 0 ID=cds-WP_001094726.1;Parent=gene-AB11_RS15500;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AB11_RS15500;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 150079 150951 . - . ID=gene-AB11_RS15505;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AB11_RS15505;old_locus_tag=AB11_2862 NZ_JHDH01000137.1 Protein Homology CDS 150079 150951 . - 0 ID=cds-WP_000158547.1;Parent=gene-AB11_RS15505;Dbxref=GenBank:WP_000158547.1;Name=WP_000158547.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AB11_RS15505;product=aldose 1-epimerase;protein_id=WP_000158547.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 150963 152057 . - . ID=gene-AB11_RS15510;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AB11_RS15510;old_locus_tag=AB11_2863 NZ_JHDH01000137.1 Protein Homology CDS 150963 152057 . - 0 ID=cds-WP_000700787.1;Parent=gene-AB11_RS15510;Dbxref=GenBank:WP_000700787.1;Name=WP_000700787.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AB11_RS15510;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700787.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 152090 153088 . - . ID=gene-AB11_RS15515;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AB11_RS15515;old_locus_tag=AB11_2864 NZ_JHDH01000137.1 Protein Homology CDS 152090 153088 . - 0 ID=cds-WP_001276670.1;Parent=gene-AB11_RS15515;Dbxref=GenBank:WP_001276670.1;Name=WP_001276670.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AB11_RS15515;product=ABC transporter permease;protein_id=WP_001276670.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 153113 154624 . - . ID=gene-AB11_RS15520;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AB11_RS15520;old_locus_tag=AB11_2865 NZ_JHDH01000137.1 Protein Homology CDS 153113 154624 . - 0 ID=cds-WP_001556163.1;Parent=gene-AB11_RS15520;Dbxref=GenBank:WP_001556163.1;Name=WP_001556163.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AB11_RS15520;product=sugar ABC transporter ATP-binding protein;protein_id=WP_001556163.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 154647 155630 . - . ID=gene-AB11_RS15525;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AB11_RS15525;old_locus_tag=AB11_2866 NZ_JHDH01000137.1 Protein Homology CDS 154647 155630 . - 0 ID=cds-WP_001556164.1;Parent=gene-AB11_RS15525;Dbxref=GenBank:WP_001556164.1;Name=WP_001556164.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AB11_RS15525;product=substrate-binding domain-containing protein;protein_id=WP_001556164.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 155727 159008 . - . ID=gene-AB11_RS15530;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AB11_RS15530;old_locus_tag=AB11_2867 NZ_JHDH01000137.1 Protein Homology CDS 155727 159008 . - 0 ID=cds-WP_032223734.1;Parent=gene-AB11_RS15530;Dbxref=GenBank:WP_032223734.1;Name=WP_032223734.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AB11_RS15530;product=DUF5107 domain-containing protein;protein_id=WP_032223734.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 159126 160319 . + . ID=gene-AB11_RS15535;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AB11_RS15535;old_locus_tag=AB11_2868 NZ_JHDH01000137.1 Protein Homology CDS 159126 160319 . + 0 ID=cds-WP_032223737.1;Parent=gene-AB11_RS15535;Dbxref=GenBank:WP_032223737.1;Name=WP_032223737.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311443.2;locus_tag=AB11_RS15535;product=ROK family protein;protein_id=WP_032223737.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 160517 161770 . - . ID=gene-AB11_RS15540;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AB11_RS15540;old_locus_tag=AB11_2869 NZ_JHDH01000137.1 Protein Homology CDS 160517 161770 . - 0 ID=cds-WP_000919159.1;Parent=gene-AB11_RS15540;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AB11_RS15540;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 162098 163288 . + . ID=gene-AB11_RS15545;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AB11_RS15545;old_locus_tag=AB11_2871 NZ_JHDH01000137.1 Protein Homology CDS 162098 163288 . + 0 ID=cds-WP_000883122.1;Parent=gene-AB11_RS15545;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AB11_RS15545;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 163333 163671 . - . ID=gene-AB11_RS15550;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AB11_RS15550;old_locus_tag=AB11_2872 NZ_JHDH01000137.1 Protein Homology CDS 163333 163671 . - 0 ID=cds-WP_000717691.1;Parent=gene-AB11_RS15550;Dbxref=GenBank:WP_000717691.1;Name=WP_000717691.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AB11_RS15550;product=nitrogen regulatory protein P-II;protein_id=WP_000717691.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 163732 165066 . - . ID=gene-AB11_RS15555;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AB11_RS15555;old_locus_tag=AB11_2873 NZ_JHDH01000137.1 Protein Homology CDS 163732 165066 . - 0 ID=cds-WP_001295369.1;Parent=gene-AB11_RS15555;Dbxref=GenBank:WP_001295369.1;Name=WP_001295369.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AB11_RS15555;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 165056 165769 . - . ID=gene-AB11_RS15560;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AB11_RS15560;old_locus_tag=AB11_2874 NZ_JHDH01000137.1 Protein Homology CDS 165056 165769 . - 0 ID=cds-WP_001215861.1;Parent=gene-AB11_RS15560;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AB11_RS15560;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 165934 167361 . - . ID=gene-AB11_RS15565;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AB11_RS15565;old_locus_tag=AB11_2875 NZ_JHDH01000137.1 Protein Homology CDS 165934 167361 . - 0 ID=cds-WP_024187693.1;Parent=gene-AB11_RS15565;Dbxref=GenBank:WP_024187693.1;Name=WP_024187693.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AB11_RS15565;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_024187693.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 167919 171806 . - . ID=gene-AB11_RS15570;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AB11_RS15570;old_locus_tag=AB11_2876 NZ_JHDH01000137.1 Protein Homology CDS 167919 171806 . - 0 ID=cds-WP_032223740.1;Parent=gene-AB11_RS15570;Dbxref=GenBank:WP_032223740.1;Name=WP_032223740.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026170.1;locus_tag=AB11_RS15570;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_032223740.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 172064 173620 . + . ID=gene-AB11_RS15575;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AB11_RS15575;old_locus_tag=AB11_2878 NZ_JHDH01000137.1 Protein Homology CDS 172064 173620 . + 0 ID=cds-WP_000734212.1;Parent=gene-AB11_RS15575;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AB11_RS15575;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 173617 174120 . - . ID=gene-AB11_RS15580;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AB11_RS15580;old_locus_tag=AB11_2879 NZ_JHDH01000137.1 Protein Homology CDS 173617 174120 . - 0 ID=cds-WP_001297409.1;Parent=gene-AB11_RS15580;Dbxref=GenBank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AB11_RS15580;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 174178 174813 . - . ID=gene-AB11_RS15585;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AB11_RS15585;old_locus_tag=AB11_2880 NZ_JHDH01000137.1 Protein Homology CDS 174178 174813 . - 0 ID=cds-WP_000190655.1;Parent=gene-AB11_RS15585;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AB11_RS15585;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 175022 175870 . + . ID=gene-AB11_RS15590;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AB11_RS15590;old_locus_tag=AB11_2881 NZ_JHDH01000137.1 Protein Homology CDS 175022 175870 . + 0 ID=cds-WP_001013779.1;Parent=gene-AB11_RS15590;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AB11_RS15590;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 175926 176186 . + . ID=gene-AB11_RS15595;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AB11_RS15595;old_locus_tag=AB11_2882 NZ_JHDH01000137.1 Protein Homology CDS 175926 176186 . + 0 ID=cds-WP_001196283.1;Parent=gene-AB11_RS15595;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AB11_RS15595;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 176380 176460 . - . ID=gene-AB11_RS15600;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AB11_RS15600 NZ_JHDH01000137.1 Protein Homology CDS 176380 176460 . - 0 ID=cds-WP_000128776.1;Parent=gene-AB11_RS15600;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AB11_RS15600;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 176881 177261 . - . ID=gene-AB11_RS15605;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AB11_RS15605;old_locus_tag=AB11_2883 NZ_JHDH01000137.1 Protein Homology CDS 176881 177261 . - 0 ID=cds-WP_000986023.1;Parent=gene-AB11_RS15605;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AB11_RS15605;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 177261 177992 . - . ID=gene-AB11_RS15610;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AB11_RS15610;old_locus_tag=AB11_2884 NZ_JHDH01000137.1 Protein Homology CDS 177261 177992 . - 0 ID=cds-WP_001297412.1;Parent=gene-AB11_RS15610;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AB11_RS15610;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 178004 178732 . - . ID=gene-AB11_RS15615;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AB11_RS15615;old_locus_tag=AB11_2885 NZ_JHDH01000137.1 Protein Homology CDS 178004 178732 . - 0 ID=cds-WP_000399404.1;Parent=gene-AB11_RS15615;Dbxref=GenBank:WP_000399404.1;Name=WP_000399404.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AB11_RS15615;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 178744 179649 . - . ID=gene-AB11_RS15620;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AB11_RS15620;old_locus_tag=AB11_2886 NZ_JHDH01000137.1 Protein Homology CDS 178744 179649 . - 0 ID=cds-WP_000020749.1;Parent=gene-AB11_RS15620;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AB11_RS15620;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 179646 180326 . - . ID=gene-AB11_RS15625;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AB11_RS15625;old_locus_tag=AB11_2887 NZ_JHDH01000137.1 Protein Homology CDS 179646 180326 . - 0 ID=cds-WP_001068343.1;Parent=gene-AB11_RS15625;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AB11_RS15625;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 180598 181572 . - . ID=gene-AB11_RS15630;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AB11_RS15630;old_locus_tag=AB11_2888 NZ_JHDH01000137.1 Protein Homology CDS 180598 181572 . - 0 ID=cds-WP_000002541.1;Parent=gene-AB11_RS15630;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AB11_RS15630;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 181588 183387 . - . ID=gene-AB11_RS15635;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AB11_RS15635;old_locus_tag=AB11_2889 NZ_JHDH01000137.1 Protein Homology CDS 181588 183387 . - 0 ID=cds-WP_000790168.1;Parent=gene-AB11_RS15635;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AB11_RS15635;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 183585 184064 . - . ID=gene-AB11_RS15640;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AB11_RS15640;old_locus_tag=AB11_2890 NZ_JHDH01000137.1 Protein Homology CDS 183585 184064 . - 0 ID=cds-WP_000589068.1;Parent=gene-AB11_RS15640;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AB11_RS15640;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 184061 185017 . - . ID=gene-AB11_RS15645;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AB11_RS15645;old_locus_tag=AB11_2891 NZ_JHDH01000137.1 Protein Homology CDS 184061 185017 . - 0 ID=cds-WP_000812053.1;Parent=gene-AB11_RS15645;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AB11_RS15645;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 185017 185667 . - . ID=gene-AB11_RS15650;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AB11_RS15650;old_locus_tag=AB11_2892 NZ_JHDH01000137.1 Protein Homology CDS 185017 185667 . - 0 ID=cds-WP_001168459.1;Parent=gene-AB11_RS15650;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AB11_RS15650;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 185700 186275 . - . ID=gene-AB11_RS15655;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AB11_RS15655;old_locus_tag=AB11_2893 NZ_JHDH01000137.1 Protein Homology CDS 185700 186275 . - 0 ID=cds-WP_001295364.1;Parent=gene-AB11_RS15655;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AB11_RS15655;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 186272 186427 . - . ID=gene-AB11_RS15660;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AB11_RS15660 NZ_JHDH01000137.1 Protein Homology CDS 186272 186427 . - 0 ID=cds-WP_001303621.1;Parent=gene-AB11_RS15660;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AB11_RS15660;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 186683 188305 . + . ID=gene-AB11_RS15665;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AB11_RS15665;old_locus_tag=AB11_2894 NZ_JHDH01000137.1 Protein Homology CDS 186683 188305 . + 0 ID=cds-WP_032223743.1;Parent=gene-AB11_RS15665;Dbxref=GenBank:WP_032223743.1;Name=WP_032223743.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AB11_RS15665;product=L-aspartate oxidase;protein_id=WP_032223743.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 188290 189027 . - . ID=gene-AB11_RS15670;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AB11_RS15670;old_locus_tag=AB11_2895 NZ_JHDH01000137.1 Protein Homology CDS 188290 189027 . - 0 ID=cds-WP_032223745.1;Parent=gene-AB11_RS15670;Dbxref=GenBank:WP_032223745.1;Name=WP_032223745.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AB11_RS15670;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_032223745.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 189159 190493 . + . ID=gene-AB11_RS15675;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AB11_RS15675;old_locus_tag=AB11_2896 NZ_JHDH01000137.1 Protein Homology CDS 189159 190493 . + 0 ID=cds-WP_000219193.1;Parent=gene-AB11_RS15675;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AB11_RS15675;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 190702 191583 . - . ID=gene-AB11_RS15680;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AB11_RS15680;old_locus_tag=AB11_2897 NZ_JHDH01000137.1 Protein Homology CDS 190702 191583 . - 0 ID=cds-WP_001300638.1;Parent=gene-AB11_RS15680;Dbxref=GenBank:WP_001300638.1;Name=WP_001300638.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AB11_RS15680;product=LysR family transcriptional regulator;protein_id=WP_001300638.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 191686 192273 . + . ID=gene-AB11_RS15685;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AB11_RS15685;old_locus_tag=AB11_2898 NZ_JHDH01000137.1 Protein Homology CDS 191686 192273 . + 0 ID=cds-WP_000189207.1;Parent=gene-AB11_RS15685;Dbxref=GenBank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AB11_RS15685;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 192329 192712 . - . ID=gene-AB11_RS15690;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AB11_RS15690;old_locus_tag=AB11_2899 NZ_JHDH01000137.1 Protein Homology CDS 192329 192712 . - 0 ID=cds-WP_000627807.1;Parent=gene-AB11_RS15690;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AB11_RS15690;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 193017 193706 . + . ID=gene-AB11_RS15695;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AB11_RS15695;old_locus_tag=AB11_2900 NZ_JHDH01000137.1 Protein Homology CDS 193017 193706 . + 0 ID=cds-WP_001262716.1;Parent=gene-AB11_RS15695;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AB11_RS15695;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 193754 194791 . - . ID=gene-AB11_RS15700;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AB11_RS15700;old_locus_tag=AB11_2901 NZ_JHDH01000137.1 Protein Homology CDS 193754 194791 . - 0 ID=cds-WP_000997403.1;Parent=gene-AB11_RS15700;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AB11_RS15700;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 194998 195417 . + . ID=gene-AB11_RS15705;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AB11_RS15705;old_locus_tag=AB11_2902 NZ_JHDH01000137.1 Protein Homology CDS 194998 195417 . + 0 ID=cds-WP_001098726.1;Parent=gene-AB11_RS15705;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AB11_RS15705;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 195486 196184 . + . ID=gene-AB11_RS15710;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AB11_RS15710;old_locus_tag=AB11_2903 NZ_JHDH01000137.1 Protein Homology CDS 195486 196184 . + 0 ID=cds-WP_001300438.1;Parent=gene-AB11_RS15710;Dbxref=GenBank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AB11_RS15710;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001300438.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 196216 198876 . + . ID=gene-AB11_RS15715;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AB11_RS15715;old_locus_tag=AB11_2904 NZ_JHDH01000137.1 Protein Homology CDS 196216 198876 . + 0 ID=cds-WP_000083005.1;Parent=gene-AB11_RS15715;Dbxref=GenBank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AB11_RS15715;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000083005.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 198990 200345 . + . ID=gene-AB11_RS15720;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AB11_RS15720;old_locus_tag=AB11_2905 NZ_JHDH01000137.1 Protein Homology CDS 198990 200345 . + 0 ID=cds-WP_000949265.1;Parent=gene-AB11_RS15720;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AB11_RS15720;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 200391 200714 . + . ID=gene-AB11_RS15725;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AB11_RS15725;old_locus_tag=AB11_2906 NZ_JHDH01000137.1 Protein Homology CDS 200391 200714 . + 0 ID=cds-WP_001300818.1;Parent=gene-AB11_RS15725;Dbxref=GenBank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AB11_RS15725;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 200711 202009 . - . ID=gene-AB11_RS15730;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AB11_RS15730;old_locus_tag=AB11_2907 NZ_JHDH01000137.1 Protein Homology CDS 200711 202009 . - 0 ID=cds-WP_000841103.1;Parent=gene-AB11_RS15730;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AB11_RS15730;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JHDH01000137.1 RefSeq gene 202335 202450 . - . ID=gene-AB11_RS15735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS15735;old_locus_tag=AB11_2908 NZ_JHDH01000137.1 cmsearch rRNA 202335 202450 . - . ID=rna-AB11_RS15735;Parent=gene-AB11_RS15735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15735;product=5S ribosomal RNA NZ_JHDH01000137.1 cmsearch exon 202335 202450 . - . ID=exon-AB11_RS15735-1;Parent=rna-AB11_RS15735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15735;product=5S ribosomal RNA NZ_JHDH01000137.1 RefSeq gene 202545 205447 . - . ID=gene-AB11_RS15740;Name=AB11_RS15740;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS15740 NZ_JHDH01000137.1 cmsearch rRNA 202545 205447 . - . ID=rna-AB11_RS15740;Parent=gene-AB11_RS15740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15740;product=23S ribosomal RNA NZ_JHDH01000137.1 cmsearch exon 202545 205447 . - . ID=exon-AB11_RS15740-1;Parent=rna-AB11_RS15740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15740;product=23S ribosomal RNA ##sequence-region NZ_JHDH01000138.1 1 131117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000138.1 RefSeq region 1 131117 . + . ID=NZ_JHDH01000138.1:1..131117;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000138.1 RefSeq gene 1 1310 . - . ID=gene-AB11_RS15745;Name=AB11_RS15745;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS15745;partial=true;start_range=.,1 NZ_JHDH01000138.1 cmsearch rRNA 1 1310 . - . ID=rna-AB11_RS15745;Parent=gene-AB11_RS15745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15745;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000138.1 cmsearch exon 1 1310 . - . ID=exon-AB11_RS15745-1;Parent=rna-AB11_RS15745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15745;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000138.1 RefSeq gene 1753 4326 . - . ID=gene-AB11_RS15750;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AB11_RS15750;old_locus_tag=AB11_2913 NZ_JHDH01000138.1 Protein Homology CDS 1753 4326 . - 0 ID=cds-WP_001235102.1;Parent=gene-AB11_RS15750;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AB11_RS15750;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 4456 5187 . - . ID=gene-AB11_RS15755;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AB11_RS15755;old_locus_tag=AB11_2914 NZ_JHDH01000138.1 Protein Homology CDS 4456 5187 . - 0 ID=cds-WP_032223759.1;Parent=gene-AB11_RS15755;Dbxref=GenBank:WP_032223759.1;Name=WP_032223759.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AB11_RS15755;product=purine nucleoside phosphorylase YfiH;protein_id=WP_032223759.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 5184 6164 . - . ID=gene-AB11_RS15760;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AB11_RS15760;old_locus_tag=AB11_2915 NZ_JHDH01000138.1 Protein Homology CDS 5184 6164 . - 0 ID=cds-WP_000079100.1;Parent=gene-AB11_RS15760;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AB11_RS15760;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 6299 7036 . + . ID=gene-AB11_RS15765;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AB11_RS15765;old_locus_tag=AB11_2916 NZ_JHDH01000138.1 Protein Homology CDS 6299 7036 . + 0 ID=cds-WP_000197686.1;Parent=gene-AB11_RS15765;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AB11_RS15765;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 7307 7648 . + . ID=gene-AB11_RS15770;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AB11_RS15770;old_locus_tag=AB11_2917 NZ_JHDH01000138.1 Protein Homology CDS 7307 7648 . + 0 ID=cds-WP_000178456.1;Parent=gene-AB11_RS15770;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AB11_RS15770;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JHDH01000138.1 cmsearch sequence_feature 7751 7876 . + . ID=id-NZ_JHDH01000138.1:7751..7876;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000138.1 RefSeq gene 7752 7799 . + . ID=gene-AB11_RS15775;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AB11_RS15775 NZ_JHDH01000138.1 Protein Homology CDS 7752 7799 . + 0 ID=cds-WP_010723158.1;Parent=gene-AB11_RS15775;Dbxref=GenBank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AB11_RS15775;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 7898 9058 . + . ID=gene-AB11_RS15780;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AB11_RS15780;old_locus_tag=AB11_2918 NZ_JHDH01000138.1 Protein Homology CDS 7898 9058 . + 0 ID=cds-WP_000200120.1;Parent=gene-AB11_RS15780;Dbxref=GenBank:WP_000200120.1;Name=WP_000200120.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AB11_RS15780;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200120.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 9101 10222 . - . ID=gene-AB11_RS15785;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AB11_RS15785;old_locus_tag=AB11_2919 NZ_JHDH01000138.1 Protein Homology CDS 9101 10222 . - 0 ID=cds-WP_000225229.1;Parent=gene-AB11_RS15785;Dbxref=GenBank:WP_000225229.1;Name=WP_000225229.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417091.1;locus_tag=AB11_RS15785;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225229.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 10233 11303 . - . ID=gene-AB11_RS15790;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AB11_RS15790;old_locus_tag=AB11_2920 NZ_JHDH01000138.1 Protein Homology CDS 10233 11303 . - 0 ID=cds-WP_001168037.1;Parent=gene-AB11_RS15790;Dbxref=GenBank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AB11_RS15790;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 11513 11878 . + . ID=gene-AB11_RS15795;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AB11_RS15795;old_locus_tag=AB11_2921 NZ_JHDH01000138.1 Protein Homology CDS 11513 11878 . + 0 ID=cds-WP_000976004.1;Parent=gene-AB11_RS15795;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AB11_RS15795;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 12028 12546 . + . ID=gene-AB11_RS15800;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AB11_RS15800;old_locus_tag=AB11_2922 NZ_JHDH01000138.1 Protein Homology CDS 12028 12546 . + 0 ID=cds-WP_001212391.1;Parent=gene-AB11_RS15800;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AB11_RS15800;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 12536 13762 . + . ID=gene-AB11_RS15805;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AB11_RS15805;old_locus_tag=AB11_2923 NZ_JHDH01000138.1 Protein Homology CDS 12536 13762 . + 0 ID=cds-WP_000969032.1;Parent=gene-AB11_RS15805;Dbxref=GenBank:WP_000969032.1;Name=WP_000969032.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AB11_RS15805;product=diguanylate cyclase DgcN;protein_id=WP_000969032.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 13778 14260 . + . ID=gene-AB11_RS15810;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AB11_RS15810;old_locus_tag=AB11_2924 NZ_JHDH01000138.1 Protein Homology CDS 13778 14260 . + 0 ID=cds-WP_000589847.1;Parent=gene-AB11_RS15810;Dbxref=GenBank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AB11_RS15810;product=OmpA family protein;protein_id=WP_000589847.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 14336 14683 . - . ID=gene-AB11_RS15815;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AB11_RS15815;old_locus_tag=AB11_2925 NZ_JHDH01000138.1 Protein Homology CDS 14336 14683 . - 0 ID=cds-WP_000065253.1;Parent=gene-AB11_RS15815;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AB11_RS15815;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 14725 15492 . - . ID=gene-AB11_RS15820;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AB11_RS15820;old_locus_tag=AB11_2926 NZ_JHDH01000138.1 Protein Homology CDS 14725 15492 . - 0 ID=cds-WP_000264777.1;Parent=gene-AB11_RS15820;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AB11_RS15820;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 15523 16071 . - . ID=gene-AB11_RS15825;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AB11_RS15825;old_locus_tag=AB11_2927 NZ_JHDH01000138.1 Protein Homology CDS 15523 16071 . - 0 ID=cds-WP_000043335.1;Parent=gene-AB11_RS15825;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AB11_RS15825;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 16090 16338 . - . ID=gene-AB11_RS15830;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AB11_RS15830;old_locus_tag=AB11_2928 NZ_JHDH01000138.1 Protein Homology CDS 16090 16338 . - 0 ID=cds-WP_000256450.1;Parent=gene-AB11_RS15830;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AB11_RS15830;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 16587 17948 . - . ID=gene-AB11_RS15835;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AB11_RS15835;old_locus_tag=AB11_2929 NZ_JHDH01000138.1 Protein Homology CDS 16587 17948 . - 0 ID=cds-WP_000460035.1;Parent=gene-AB11_RS15835;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AB11_RS15835;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 18115 18906 . + . ID=gene-AB11_RS15840;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AB11_RS15840;old_locus_tag=AB11_2930 NZ_JHDH01000138.1 Protein Homology CDS 18115 18906 . + 0 ID=cds-WP_001338897.1;Parent=gene-AB11_RS15840;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AB11_RS15840;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 18927 20213 . + . ID=gene-AB11_RS15845;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AB11_RS15845;old_locus_tag=AB11_2931 NZ_JHDH01000138.1 Protein Homology CDS 18927 20213 . + 0 ID=cds-WP_010723175.1;Parent=gene-AB11_RS15845;Dbxref=GenBank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AB11_RS15845;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 20268 20861 . - . ID=gene-AB11_RS15850;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AB11_RS15850;old_locus_tag=AB11_2932 NZ_JHDH01000138.1 Protein Homology CDS 20268 20861 . - 0 ID=cds-WP_001296310.1;Parent=gene-AB11_RS15850;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AB11_RS15850;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 20984 21862 . + . ID=gene-AB11_RS15855;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AB11_RS15855;old_locus_tag=AB11_2934 NZ_JHDH01000138.1 Protein Homology CDS 20984 21862 . + 0 ID=cds-WP_001059169.1;Parent=gene-AB11_RS15855;Dbxref=GenBank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AB11_RS15855;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 21948 23609 . + . ID=gene-AB11_RS15860;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AB11_RS15860;old_locus_tag=AB11_2935 NZ_JHDH01000138.1 Protein Homology CDS 21948 23609 . + 0 ID=cds-WP_000880910.1;Parent=gene-AB11_RS15860;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AB11_RS15860;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 23758 24099 . + . ID=gene-AB11_RS15865;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AB11_RS15865;old_locus_tag=AB11_2936 NZ_JHDH01000138.1 Protein Homology CDS 23758 24099 . + 0 ID=cds-WP_001203437.1;Parent=gene-AB11_RS15865;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AB11_RS15865;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 24161 24451 . - . ID=gene-AB11_RS15870;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AB11_RS15870;old_locus_tag=AB11_2937 NZ_JHDH01000138.1 Protein Homology CDS 24161 24451 . - 0 ID=cds-WP_001117838.1;Parent=gene-AB11_RS15870;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AB11_RS15870;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 24441 24878 . - . ID=gene-AB11_RS15875;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AB11_RS15875;old_locus_tag=AB11_2938 NZ_JHDH01000138.1 Protein Homology CDS 24441 24878 . - 0 ID=cds-WP_001300750.1;Parent=gene-AB11_RS15875;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AB11_RS15875;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 25049 25531 . + . ID=gene-AB11_RS15880;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AB11_RS15880;old_locus_tag=AB11_2939 NZ_JHDH01000138.1 Protein Homology CDS 25049 25531 . + 0 ID=cds-WP_000162574.1;Parent=gene-AB11_RS15880;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AB11_RS15880;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 25746 26108 . + . ID=gene-AB11_RS15885;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AB11_RS15885 NZ_JHDH01000138.1 cmsearch tmRNA 25746 26108 . + . ID=rna-AB11_RS15885;Parent=gene-AB11_RS15885;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15885;product=transfer-messenger RNA NZ_JHDH01000138.1 cmsearch exon 25746 26108 . + . ID=exon-AB11_RS15885-1;Parent=rna-AB11_RS15885;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS15885;product=transfer-messenger RNA NZ_JHDH01000138.1 RefSeq gene 26269 30849 . - . ID=gene-AB11_RS15890;Name=ypjA;gbkey=Gene;gene=ypjA;gene_biotype=protein_coding;locus_tag=AB11_RS15890;old_locus_tag=AB11_2940 NZ_JHDH01000138.1 Protein Homology CDS 26269 30849 . - 0 ID=cds-WP_071996237.1;Parent=gene-AB11_RS15890;Dbxref=GenBank:WP_071996237.1;Name=WP_071996237.1;gbkey=CDS;gene=ypjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AB11_RS15890;product=adhesin-like autotransporter YpjA/EhaD;protein_id=WP_071996237.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 30914 31033 . - . ID=gene-AB11_RS15895;Name=AB11_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS15895;old_locus_tag=AB11_2941 NZ_JHDH01000138.1 Protein Homology CDS 30914 31033 . - 0 ID=cds-WP_001120794.1;Parent=gene-AB11_RS15895;Dbxref=GenBank:WP_001120794.1;Name=WP_001120794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AB11_RS15895;product=hypothetical protein;protein_id=WP_001120794.1;transl_table=11 NZ_JHDH01000138.1 RefSeq pseudogene 31257 31424 . - . ID=gene-AB11_RS15900;Name=AB11_RS15900;end_range=31424,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS15900;partial=true;pseudo=true;start_range=.,31257 NZ_JHDH01000138.1 Protein Homology CDS 31257 31424 . - 0 ID=cds-AB11_RS15900;Parent=gene-AB11_RS15900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=31424,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239934.1;locus_tag=AB11_RS15900;partial=true;product=recombinase family protein;pseudo=true;start_range=.,31257;transl_table=11 NZ_JHDH01000138.1 RefSeq pseudogene 31761 33134 . - . ID=gene-AB11_RS15905;Name=ypjCB;gbkey=Gene;gene=ypjCB;gene_biotype=pseudogene;locus_tag=AB11_RS15905;pseudo=true NZ_JHDH01000138.1 Protein Homology CDS 31761 33134 . - 0 ID=cds-AB11_RS15905;Parent=gene-AB11_RS15905;Note=internal stop;gbkey=CDS;gene=ypjCB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=AB11_RS15905;product=YpjCB family protein;pseudo=true;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 33885 33960 . - . ID=gene-AB11_RS15910;Name=AB11_RS15910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS15910;old_locus_tag=AB11_2945 NZ_JHDH01000138.1 tRNAscan-SE tRNA 33885 33960 . - . ID=rna-AB11_RS15910;Parent=gene-AB11_RS15910;anticodon=(pos:complement(33925..33927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS15910;product=tRNA-Ile NZ_JHDH01000138.1 tRNAscan-SE exon 33885 33960 . - . ID=exon-AB11_RS15910-1;Parent=rna-AB11_RS15910;anticodon=(pos:complement(33925..33927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS15910;product=tRNA-Ile NZ_JHDH01000138.1 RefSeq pseudogene 34520 36772 . + . ID=gene-AB11_RS15920;Name=AB11_RS15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS15920;pseudo=true NZ_JHDH01000138.1 Protein Homology CDS 34520 36772 . + 0 ID=cds-AB11_RS15920;Parent=gene-AB11_RS15920;Note=internal stop;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AB11_RS15920;product=alpha amylase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 37108 38085 . + . ID=gene-AB11_RS15925;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AB11_RS15925;old_locus_tag=AB11_2948 NZ_JHDH01000138.1 Protein Homology CDS 37108 38085 . + 0 ID=cds-WP_000993126.1;Parent=gene-AB11_RS15925;Dbxref=GenBank:WP_000993126.1;Name=WP_000993126.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=AB11_RS15925;product=glutarate dioxygenase GlaH;protein_id=WP_000993126.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 38105 39373 . + . ID=gene-AB11_RS15930;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AB11_RS15930;old_locus_tag=AB11_2949 NZ_JHDH01000138.1 Protein Homology CDS 38105 39373 . + 0 ID=cds-WP_000271951.1;Parent=gene-AB11_RS15930;Dbxref=GenBank:WP_000271951.1;Name=WP_000271951.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417146.2;locus_tag=AB11_RS15930;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271951.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 39396 40844 . + . ID=gene-AB11_RS15935;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AB11_RS15935;old_locus_tag=AB11_2950 NZ_JHDH01000138.1 Protein Homology CDS 39396 40844 . + 0 ID=cds-WP_000772831.1;Parent=gene-AB11_RS15935;Dbxref=GenBank:WP_000772831.1;Name=WP_000772831.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417147.1;locus_tag=AB11_RS15935;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772831.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 40858 42138 . + . ID=gene-AB11_RS15940;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AB11_RS15940;old_locus_tag=AB11_2951 NZ_JHDH01000138.1 Protein Homology CDS 40858 42138 . + 0 ID=cds-WP_001087611.1;Parent=gene-AB11_RS15940;Dbxref=GenBank:WP_001087611.1;Name=WP_001087611.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417148.1;locus_tag=AB11_RS15940;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001087611.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 42376 43776 . + . ID=gene-AB11_RS15945;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AB11_RS15945;old_locus_tag=AB11_2952 NZ_JHDH01000138.1 Protein Homology CDS 42376 43776 . + 0 ID=cds-WP_032223762.1;Parent=gene-AB11_RS15945;Dbxref=GenBank:WP_032223762.1;Name=WP_032223762.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=AB11_RS15945;product=GABA permease;protein_id=WP_032223762.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 43797 44459 . + . ID=gene-AB11_RS15950;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AB11_RS15950;old_locus_tag=AB11_2953 NZ_JHDH01000138.1 Protein Homology CDS 43797 44459 . + 0 ID=cds-WP_000156811.1;Parent=gene-AB11_RS15950;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AB11_RS15950;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 44460 44909 . - . ID=gene-AB11_RS15955;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AB11_RS15955;old_locus_tag=AB11_2954 NZ_JHDH01000138.1 Protein Homology CDS 44460 44909 . - 0 ID=cds-WP_000522415.1;Parent=gene-AB11_RS15955;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AB11_RS15955;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 44993 45151 . - . ID=gene-AB11_RS15960;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AB11_RS15960;old_locus_tag=AB11_2955 NZ_JHDH01000138.1 Protein Homology CDS 44993 45151 . - 0 ID=cds-WP_000508177.1;Parent=gene-AB11_RS15960;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AB11_RS15960;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 45334 45633 . + . ID=gene-AB11_RS15965;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AB11_RS15965;old_locus_tag=AB11_2956 NZ_JHDH01000138.1 Protein Homology CDS 45334 45633 . + 0 ID=cds-WP_000137280.1;Parent=gene-AB11_RS15965;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AB11_RS15965;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 45643 46167 . + . ID=gene-AB11_RS15970;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AB11_RS15970;old_locus_tag=AB11_2957 NZ_JHDH01000138.1 Protein Homology CDS 45643 46167 . + 0 ID=cds-WP_001229442.1;Parent=gene-AB11_RS15970;Dbxref=GenBank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AB11_RS15970;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229442.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 46214 46618 . - . ID=gene-AB11_RS15975;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AB11_RS15975;old_locus_tag=AB11_2958 NZ_JHDH01000138.1 Protein Homology CDS 46214 46618 . - 0 ID=cds-WP_000115383.1;Parent=gene-AB11_RS15975;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AB11_RS15975;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 47287 47736 . + . ID=gene-AB11_RS15980;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AB11_RS15980;old_locus_tag=AB11_2959 NZ_JHDH01000138.1 Protein Homology CDS 47287 47736 . + 0 ID=cds-WP_000492656.1;Parent=gene-AB11_RS15980;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AB11_RS15980;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 47773 48117 . - . ID=gene-AB11_RS15985;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AB11_RS15985;old_locus_tag=AB11_2960 NZ_JHDH01000138.1 Protein Homology CDS 47773 48117 . - 0 ID=cds-WP_000281320.1;Parent=gene-AB11_RS15985;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AB11_RS15985;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 48269 48598 . + . ID=gene-AB11_RS15990;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AB11_RS15990;old_locus_tag=AB11_2961 NZ_JHDH01000138.1 Protein Homology CDS 48269 48598 . + 0 ID=cds-WP_001295174.1;Parent=gene-AB11_RS15990;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AB11_RS15990;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 48846 49091 . + . ID=gene-AB11_RS15995;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AB11_RS15995;old_locus_tag=AB11_2962 NZ_JHDH01000138.1 Protein Homology CDS 48846 49091 . + 0 ID=cds-WP_001223227.1;Parent=gene-AB11_RS15995;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AB11_RS15995;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 49088 49498 . + . ID=gene-AB11_RS16000;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AB11_RS16000;old_locus_tag=AB11_2963 NZ_JHDH01000138.1 Protein Homology CDS 49088 49498 . + 0 ID=cds-WP_000080947.1;Parent=gene-AB11_RS16000;Dbxref=GenBank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AB11_RS16000;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 49471 51615 . + . ID=gene-AB11_RS16005;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AB11_RS16005;old_locus_tag=AB11_2964 NZ_JHDH01000138.1 Protein Homology CDS 49471 51615 . + 0 ID=cds-WP_000246527.1;Parent=gene-AB11_RS16005;Dbxref=GenBank:WP_000246527.1;Name=WP_000246527.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AB11_RS16005;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246527.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 51625 52584 . + . ID=gene-AB11_RS16010;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AB11_RS16010;old_locus_tag=AB11_2965 NZ_JHDH01000138.1 Protein Homology CDS 51625 52584 . + 0 ID=cds-WP_000777969.1;Parent=gene-AB11_RS16010;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AB11_RS16010;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 52938 54140 . + . ID=gene-AB11_RS16015;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AB11_RS16015;old_locus_tag=AB11_2966 NZ_JHDH01000138.1 Protein Homology CDS 52938 54140 . + 0 ID=cds-WP_000985494.1;Parent=gene-AB11_RS16015;Dbxref=GenBank:WP_000985494.1;Name=WP_000985494.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AB11_RS16015;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 54133 55197 . + . ID=gene-AB11_RS16020;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AB11_RS16020;old_locus_tag=AB11_2967 NZ_JHDH01000138.1 Protein Homology CDS 54133 55197 . + 0 ID=cds-WP_000774988.1;Parent=gene-AB11_RS16020;Dbxref=GenBank:WP_000774988.1;Name=WP_000774988.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AB11_RS16020;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 55255 56247 . + . ID=gene-AB11_RS16025;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AB11_RS16025;old_locus_tag=AB11_2968 NZ_JHDH01000138.1 Protein Homology CDS 55255 56247 . + 0 ID=cds-WP_001216525.1;Parent=gene-AB11_RS16025;Dbxref=GenBank:WP_001216525.1;Name=WP_001216525.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AB11_RS16025;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216525.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 56439 57623 . + . ID=gene-AB11_RS16030;Name=AB11_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16030;old_locus_tag=AB11_2970 NZ_JHDH01000138.1 Protein Homology CDS 56439 57623 . + 0 ID=cds-WP_000165680.1;Parent=gene-AB11_RS16030;Dbxref=GenBank:WP_000165680.1;Name=WP_000165680.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AB11_RS16030;product=MFS transporter;protein_id=WP_000165680.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 57747 58484 . + . ID=gene-AB11_RS16035;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AB11_RS16035;old_locus_tag=AB11_2971 NZ_JHDH01000138.1 Protein Homology CDS 57747 58484 . + 0 ID=cds-WP_000445651.1;Parent=gene-AB11_RS16035;Dbxref=GenBank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417167.1;locus_tag=AB11_RS16035;product=L-valine exporter subunit YgaZ;protein_id=WP_000445651.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 58474 58809 . + . ID=gene-AB11_RS16040;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AB11_RS16040;old_locus_tag=AB11_2972 NZ_JHDH01000138.1 Protein Homology CDS 58474 58809 . + 0 ID=cds-WP_000119763.1;Parent=gene-AB11_RS16040;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AB11_RS16040;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 58900 59430 . + . ID=gene-AB11_RS16050;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AB11_RS16050;old_locus_tag=AB11_2973 NZ_JHDH01000138.1 Protein Homology CDS 58900 59430 . + 0 ID=cds-WP_000378442.1;Parent=gene-AB11_RS16050;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AB11_RS16050;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 59557 60729 . + . ID=gene-AB11_RS16055;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AB11_RS16055;old_locus_tag=AB11_2975 NZ_JHDH01000138.1 Protein Homology CDS 59557 60729 . + 0 ID=cds-WP_001326681.1;Parent=gene-AB11_RS16055;Dbxref=GenBank:WP_001326681.1;Name=WP_001326681.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417170.1;locus_tag=AB11_RS16055;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001326681.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 60746 62284 . + . ID=gene-AB11_RS16060;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AB11_RS16060;old_locus_tag=AB11_2976 NZ_JHDH01000138.1 Protein Homology CDS 60746 62284 . + 0 ID=cds-WP_001295176.1;Parent=gene-AB11_RS16060;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AB11_RS16060;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 62348 62863 . - . ID=gene-AB11_RS16065;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AB11_RS16065;old_locus_tag=AB11_2977 NZ_JHDH01000138.1 Protein Homology CDS 62348 62863 . - 0 ID=cds-WP_001130211.1;Parent=gene-AB11_RS16065;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AB11_RS16065;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 63013 64569 . - . ID=gene-AB11_RS16070;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AB11_RS16070;old_locus_tag=AB11_2978 NZ_JHDH01000138.1 Protein Homology CDS 63013 64569 . - 0 ID=cds-WP_000611804.1;Parent=gene-AB11_RS16070;Dbxref=GenBank:WP_000611804.1;Name=WP_000611804.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AB11_RS16070;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 64642 65070 . - . ID=gene-AB11_RS16075;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AB11_RS16075;old_locus_tag=AB11_2979 NZ_JHDH01000138.1 Protein Homology CDS 64642 65070 . - 0 ID=cds-WP_001287454.1;Parent=gene-AB11_RS16075;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AB11_RS16075;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 65067 65633 . - . ID=gene-AB11_RS16080;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AB11_RS16080;old_locus_tag=AB11_2980 NZ_JHDH01000138.1 Protein Homology CDS 65067 65633 . - 0 ID=cds-WP_000273290.1;Parent=gene-AB11_RS16080;Dbxref=GenBank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AB11_RS16080;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 65914 65990 . - . ID=gene-AB11_RS16085;Name=AB11_RS16085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16085;old_locus_tag=AB11_2981 NZ_JHDH01000138.1 tRNAscan-SE tRNA 65914 65990 . - . ID=rna-AB11_RS16085;Parent=gene-AB11_RS16085;anticodon=(pos:complement(65954..65956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16085;product=tRNA-Arg NZ_JHDH01000138.1 tRNAscan-SE exon 65914 65990 . - . ID=exon-AB11_RS16085-1;Parent=rna-AB11_RS16085;anticodon=(pos:complement(65954..65956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16085;product=tRNA-Arg NZ_JHDH01000138.1 RefSeq gene 66189 66265 . - . ID=gene-AB11_RS16090;Name=AB11_RS16090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16090;old_locus_tag=AB11_2982 NZ_JHDH01000138.1 tRNAscan-SE tRNA 66189 66265 . - . ID=rna-AB11_RS16090;Parent=gene-AB11_RS16090;anticodon=(pos:complement(66229..66231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16090;product=tRNA-Arg NZ_JHDH01000138.1 tRNAscan-SE exon 66189 66265 . - . ID=exon-AB11_RS16090-1;Parent=rna-AB11_RS16090;anticodon=(pos:complement(66229..66231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16090;product=tRNA-Arg NZ_JHDH01000138.1 RefSeq gene 66328 66404 . - . ID=gene-AB11_RS16095;Name=AB11_RS16095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16095;old_locus_tag=AB11_2983 NZ_JHDH01000138.1 tRNAscan-SE tRNA 66328 66404 . - . ID=rna-AB11_RS16095;Parent=gene-AB11_RS16095;anticodon=(pos:complement(66368..66370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16095;product=tRNA-Arg NZ_JHDH01000138.1 tRNAscan-SE exon 66328 66404 . - . ID=exon-AB11_RS16095-1;Parent=rna-AB11_RS16095;anticodon=(pos:complement(66368..66370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16095;product=tRNA-Arg NZ_JHDH01000138.1 RefSeq gene 66469 66545 . - . ID=gene-AB11_RS16100;Name=AB11_RS16100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16100;old_locus_tag=AB11_2984 NZ_JHDH01000138.1 tRNAscan-SE tRNA 66469 66545 . - . ID=rna-AB11_RS16100;Parent=gene-AB11_RS16100;anticodon=(pos:complement(66509..66511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16100;product=tRNA-Arg NZ_JHDH01000138.1 tRNAscan-SE exon 66469 66545 . - . ID=exon-AB11_RS16100-1;Parent=rna-AB11_RS16100;anticodon=(pos:complement(66509..66511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16100;product=tRNA-Arg NZ_JHDH01000138.1 RefSeq gene 66744 66820 . - . ID=gene-AB11_RS16105;Name=AB11_RS16105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16105;old_locus_tag=AB11_2985 NZ_JHDH01000138.1 tRNAscan-SE tRNA 66744 66820 . - . ID=rna-AB11_RS16105;Parent=gene-AB11_RS16105;anticodon=(pos:complement(66784..66786));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16105;product=tRNA-Arg NZ_JHDH01000138.1 tRNAscan-SE exon 66744 66820 . - . ID=exon-AB11_RS16105-1;Parent=rna-AB11_RS16105;anticodon=(pos:complement(66784..66786));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16105;product=tRNA-Arg NZ_JHDH01000138.1 RefSeq gene 66824 66916 . - . ID=gene-AB11_RS16110;Name=AB11_RS16110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16110;old_locus_tag=AB11_2986 NZ_JHDH01000138.1 tRNAscan-SE tRNA 66824 66916 . - . ID=rna-AB11_RS16110;Parent=gene-AB11_RS16110;anticodon=(pos:complement(66880..66882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16110;product=tRNA-Ser NZ_JHDH01000138.1 tRNAscan-SE exon 66824 66916 . - . ID=exon-AB11_RS16110-1;Parent=rna-AB11_RS16110;anticodon=(pos:complement(66880..66882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16110;product=tRNA-Ser NZ_JHDH01000138.1 RefSeq gene 67232 67417 . - . ID=gene-AB11_RS16115;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AB11_RS16115;old_locus_tag=AB11_2987 NZ_JHDH01000138.1 Protein Homology CDS 67232 67417 . - 0 ID=cds-WP_000906486.1-2;Parent=gene-AB11_RS16115;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AB11_RS16115;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 67652 70282 . - . ID=gene-AB11_RS16120;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AB11_RS16120;old_locus_tag=AB11_2989 NZ_JHDH01000138.1 Protein Homology CDS 67652 70282 . - 0 ID=cds-WP_000047184.1;Parent=gene-AB11_RS16120;Dbxref=GenBank:WP_000047184.1;Name=WP_000047184.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AB11_RS16120;product=alanine--tRNA ligase;protein_id=WP_000047184.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 70410 70910 . - . ID=gene-AB11_RS16125;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AB11_RS16125;old_locus_tag=AB11_2991 NZ_JHDH01000138.1 Protein Homology CDS 70410 70910 . - 0 ID=cds-WP_000140508.1;Parent=gene-AB11_RS16125;Dbxref=GenBank:WP_000140508.1;Name=WP_000140508.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AB11_RS16125;product=recombination regulator RecX;protein_id=WP_000140508.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 70979 72040 . - . ID=gene-AB11_RS16130;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AB11_RS16130;old_locus_tag=AB11_2992 NZ_JHDH01000138.1 Protein Homology CDS 70979 72040 . - 0 ID=cds-WP_000963143.1;Parent=gene-AB11_RS16130;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AB11_RS16130;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 72120 72617 . - . ID=gene-AB11_RS16135;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AB11_RS16135;old_locus_tag=AB11_2993 NZ_JHDH01000138.1 Protein Homology CDS 72120 72617 . - 0 ID=cds-WP_000132231.1;Parent=gene-AB11_RS16135;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AB11_RS16135;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 72762 73847 . - . ID=gene-AB11_RS16140;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AB11_RS16140;old_locus_tag=AB11_2994 NZ_JHDH01000138.1 Protein Homology CDS 72762 73847 . - 0 ID=cds-WP_001295177.1;Parent=gene-AB11_RS16140;Dbxref=GenBank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AB11_RS16140;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 74103 74666 . + . ID=gene-AB11_RS16145;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AB11_RS16145;old_locus_tag=AB11_2995 NZ_JHDH01000138.1 Protein Homology CDS 74103 74666 . + 0 ID=cds-WP_000573321.1;Parent=gene-AB11_RS16145;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AB11_RS16145;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 74663 75622 . + . ID=gene-AB11_RS16150;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AB11_RS16150;old_locus_tag=AB11_2996 NZ_JHDH01000138.1 Protein Homology CDS 74663 75622 . + 0 ID=cds-WP_000148878.1;Parent=gene-AB11_RS16150;Dbxref=GenBank:WP_000148878.1;Name=WP_000148878.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AB11_RS16150;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148878.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 75633 76004 . + . ID=gene-AB11_RS16155;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AB11_RS16155;old_locus_tag=AB11_2997 NZ_JHDH01000138.1 Protein Homology CDS 75633 76004 . + 0 ID=cds-WP_000216194.1;Parent=gene-AB11_RS16155;Dbxref=GenBank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AB11_RS16155;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 76008 76787 . + . ID=gene-AB11_RS16160;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AB11_RS16160;old_locus_tag=AB11_2998 NZ_JHDH01000138.1 Protein Homology CDS 76008 76787 . + 0 ID=cds-WP_001077358.1;Parent=gene-AB11_RS16160;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AB11_RS16160;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 76892 77251 . + . ID=gene-AB11_RS16165;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AB11_RS16165;old_locus_tag=AB11_2999 NZ_JHDH01000138.1 Protein Homology CDS 76892 77251 . + 0 ID=cds-WP_000252908.1;Parent=gene-AB11_RS16165;Dbxref=GenBank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AB11_RS16165;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 77318 78091 . + . ID=gene-AB11_RS16170;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AB11_RS16170;old_locus_tag=AB11_3000 NZ_JHDH01000138.1 Protein Homology CDS 77318 78091 . + 0 ID=cds-WP_000804550.1;Parent=gene-AB11_RS16170;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AB11_RS16170;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 78084 79049 . + . ID=gene-AB11_RS16175;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AB11_RS16175;old_locus_tag=AB11_3001 NZ_JHDH01000138.1 Protein Homology CDS 78084 79049 . + 0 ID=cds-WP_001287420.1;Parent=gene-AB11_RS16175;Dbxref=GenBank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AB11_RS16175;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 79046 80560 . - . ID=gene-AB11_RS16180;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AB11_RS16180;old_locus_tag=AB11_3002 NZ_JHDH01000138.1 Protein Homology CDS 79046 80560 . - 0 ID=cds-WP_000010749.1;Parent=gene-AB11_RS16180;Dbxref=GenBank:WP_000010749.1;Name=WP_000010749.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AB11_RS16180;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 80747 82186 . + . ID=gene-AB11_RS16185;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AB11_RS16185;old_locus_tag=AB11_3003 NZ_JHDH01000138.1 Protein Homology CDS 80747 82186 . + 0 ID=cds-WP_000029611.1;Parent=gene-AB11_RS16185;Dbxref=GenBank:WP_000029611.1;Name=WP_000029611.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=AB11_RS16185;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029611.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 82183 83316 . + . ID=gene-AB11_RS16190;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AB11_RS16190;old_locus_tag=AB11_3004 NZ_JHDH01000138.1 Protein Homology CDS 82183 83316 . + 0 ID=cds-WP_000064739.1;Parent=gene-AB11_RS16190;Dbxref=GenBank:WP_000064739.1;Name=WP_000064739.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AB11_RS16190;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064739.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 83444 85696 . - . ID=gene-AB11_RS16195;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AB11_RS16195;old_locus_tag=AB11_3005 NZ_JHDH01000138.1 Protein Homology CDS 83444 85696 . - 0 ID=cds-WP_032202567.1;Parent=gene-AB11_RS16195;Dbxref=GenBank:WP_032202567.1;Name=WP_032202567.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AB11_RS16195;product=carbamoyltransferase HypF;protein_id=WP_032202567.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 85849 86376 . - . ID=gene-AB11_RS16200;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AB11_RS16200;old_locus_tag=AB11_3006 NZ_JHDH01000138.1 Protein Homology CDS 85849 86376 . - 0 ID=cds-WP_001078777.1;Parent=gene-AB11_RS16200;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AB11_RS16200;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 86525 87535 . - . ID=gene-AB11_RS16205;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AB11_RS16205;old_locus_tag=AB11_3008 NZ_JHDH01000138.1 Protein Homology CDS 86525 87535 . - 0 ID=cds-WP_001394680.1;Parent=gene-AB11_RS16205;Dbxref=GenBank:WP_001394680.1;Name=WP_001394680.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AB11_RS16205;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001394680.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 87795 89252 . + . ID=gene-AB11_RS16210;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AB11_RS16210;old_locus_tag=AB11_3009 NZ_JHDH01000138.1 Protein Homology CDS 87795 89252 . + 0 ID=cds-WP_001107828.1;Parent=gene-AB11_RS16210;Dbxref=GenBank:WP_001107828.1;Name=WP_001107828.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AB11_RS16210;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_001107828.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 89261 90685 . + . ID=gene-AB11_RS16215;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AB11_RS16215;old_locus_tag=AB11_3010 NZ_JHDH01000138.1 Protein Homology CDS 89261 90685 . + 0 ID=cds-WP_000110363.1;Parent=gene-AB11_RS16215;Dbxref=GenBank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AB11_RS16215;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 90844 91314 . - . ID=gene-AB11_RS16220;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AB11_RS16220;old_locus_tag=AB11_3011 NZ_JHDH01000138.1 Protein Homology CDS 90844 91314 . - 0 ID=cds-WP_000132961.1;Parent=gene-AB11_RS16220;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AB11_RS16220;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 91307 91717 . - . ID=gene-AB11_RS16225;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AB11_RS16225;old_locus_tag=AB11_3012 NZ_JHDH01000138.1 Protein Homology CDS 91307 91717 . - 0 ID=cds-WP_001291921.1;Parent=gene-AB11_RS16225;Dbxref=GenBank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AB11_RS16225;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 91714 92481 . - . ID=gene-AB11_RS16230;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AB11_RS16230;old_locus_tag=AB11_3013 NZ_JHDH01000138.1 Protein Homology CDS 91714 92481 . - 0 ID=cds-WP_000067392.1;Parent=gene-AB11_RS16230;Dbxref=GenBank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=AB11_RS16230;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067392.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 92481 93023 . - . ID=gene-AB11_RS16235;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AB11_RS16235;old_locus_tag=AB11_3014 NZ_JHDH01000138.1 Protein Homology CDS 92481 93023 . - 0 ID=cds-WP_000493785.1;Parent=gene-AB11_RS16235;Dbxref=GenBank:WP_000493785.1;Name=WP_000493785.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AB11_RS16235;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493785.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 93033 94742 . - . ID=gene-AB11_RS16240;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AB11_RS16240;old_locus_tag=AB11_3015 NZ_JHDH01000138.1 Protein Homology CDS 93033 94742 . - 0 ID=cds-WP_032223764.1;Parent=gene-AB11_RS16240;Dbxref=GenBank:WP_032223764.1;Name=WP_032223764.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AB11_RS16240;product=formate hydrogenlyase subunit HycE;protein_id=WP_032223764.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 94760 95683 . - . ID=gene-AB11_RS16245;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AB11_RS16245;old_locus_tag=AB11_3016 NZ_JHDH01000138.1 Protein Homology CDS 94760 95683 . - 0 ID=cds-WP_001533374.1;Parent=gene-AB11_RS16245;Dbxref=GenBank:WP_001533374.1;Name=WP_001533374.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AB11_RS16245;product=formate hydrogenlyase subunit HycD;protein_id=WP_001533374.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 95686 97512 . - . ID=gene-AB11_RS16250;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AB11_RS16250;old_locus_tag=AB11_3017 NZ_JHDH01000138.1 Protein Homology CDS 95686 97512 . - 0 ID=cds-WP_001274386.1;Parent=gene-AB11_RS16250;Dbxref=GenBank:WP_001274386.1;Name=WP_001274386.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AB11_RS16250;product=formate hydrogenlyase subunit 3;protein_id=WP_001274386.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 97509 98120 . - . ID=gene-AB11_RS16255;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AB11_RS16255;old_locus_tag=AB11_3018 NZ_JHDH01000138.1 Protein Homology CDS 97509 98120 . - 0 ID=cds-WP_001079186.1;Parent=gene-AB11_RS16255;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AB11_RS16255;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 98245 98706 . - . ID=gene-AB11_RS16260;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AB11_RS16260;old_locus_tag=AB11_3019 NZ_JHDH01000138.1 Protein Homology CDS 98245 98706 . - 0 ID=cds-WP_000158056.1;Parent=gene-AB11_RS16260;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AB11_RS16260;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 98918 99268 . + . ID=gene-AB11_RS16265;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB11_RS16265;old_locus_tag=AB11_3020 NZ_JHDH01000138.1 Protein Homology CDS 98918 99268 . + 0 ID=cds-WP_001299100.1;Parent=gene-AB11_RS16265;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AB11_RS16265;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 99272 100144 . + . ID=gene-AB11_RS16270;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AB11_RS16270;old_locus_tag=AB11_3021 NZ_JHDH01000138.1 Protein Homology CDS 99272 100144 . + 0 ID=cds-WP_000337665.1;Parent=gene-AB11_RS16270;Dbxref=GenBank:WP_000337665.1;Name=WP_000337665.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AB11_RS16270;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 100135 100407 . + . ID=gene-AB11_RS16275;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AB11_RS16275;old_locus_tag=AB11_3022 NZ_JHDH01000138.1 Protein Homology CDS 100135 100407 . + 0 ID=cds-WP_000334881.1;Parent=gene-AB11_RS16275;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AB11_RS16275;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 100407 101528 . + . ID=gene-AB11_RS16280;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AB11_RS16280;old_locus_tag=AB11_3023 NZ_JHDH01000138.1 Protein Homology CDS 100407 101528 . + 0 ID=cds-WP_001212981.1;Parent=gene-AB11_RS16280;Dbxref=GenBank:WP_001212981.1;Name=WP_001212981.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=AB11_RS16280;product=hydrogenase formation protein HypD;protein_id=WP_001212981.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 101525 102535 . + . ID=gene-AB11_RS16285;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AB11_RS16285;old_locus_tag=AB11_3024 NZ_JHDH01000138.1 Protein Homology CDS 101525 102535 . + 0 ID=cds-WP_001059939.1;Parent=gene-AB11_RS16285;Dbxref=GenBank:WP_001059939.1;Name=WP_001059939.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AB11_RS16285;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059939.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 102609 104687 . + . ID=gene-AB11_RS16290;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB11_RS16290;old_locus_tag=AB11_3025 NZ_JHDH01000138.1 Protein Homology CDS 102609 104687 . + 0 ID=cds-WP_001297144.1;Parent=gene-AB11_RS16290;Dbxref=GenBank:WP_001297144.1;Name=WP_001297144.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=AB11_RS16290;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_001297144.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 104724 105077 . - . ID=gene-AB11_RS16295;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AB11_RS16295;old_locus_tag=AB11_3026 NZ_JHDH01000138.1 Protein Homology CDS 104724 105077 . - 0 ID=cds-WP_000015497.1;Parent=gene-AB11_RS16295;Dbxref=GenBank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AB11_RS16295;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015497.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 105109 105288 . - . ID=gene-AB11_RS16300;Name=AB11_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16300;old_locus_tag=AB11_3027 NZ_JHDH01000138.1 Protein Homology CDS 105109 105288 . - 0 ID=cds-WP_000611928.1;Parent=gene-AB11_RS16300;Dbxref=GenBank:WP_000611928.1;Name=WP_000611928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363568.1;locus_tag=AB11_RS16300;product=hypothetical protein;protein_id=WP_000611928.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 105364 107925 . + . ID=gene-AB11_RS16305;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AB11_RS16305;old_locus_tag=AB11_3028 NZ_JHDH01000138.1 Protein Homology CDS 105364 107925 . + 0 ID=cds-WP_001272898.1;Parent=gene-AB11_RS16305;Dbxref=GenBank:WP_001272898.1;Name=WP_001272898.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=AB11_RS16305;product=DNA mismatch repair protein MutS;protein_id=WP_001272898.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 108031 108687 . + . ID=gene-AB11_RS16310;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AB11_RS16310;old_locus_tag=AB11_3029 NZ_JHDH01000138.1 Protein Homology CDS 108031 108687 . + 0 ID=cds-WP_001141322.1;Parent=gene-AB11_RS16310;Dbxref=GenBank:WP_001141322.1;Name=WP_001141322.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417214.1;locus_tag=AB11_RS16310;product=protein-serine/threonine phosphatase;protein_id=WP_001141322.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 108738 109505 . - . ID=gene-AB11_RS16315;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AB11_RS16315;old_locus_tag=AB11_3030 NZ_JHDH01000138.1 Protein Homology CDS 108738 109505 . - 0 ID=cds-WP_001300386.1;Parent=gene-AB11_RS16315;Dbxref=GenBank:WP_001300386.1;Name=WP_001300386.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AB11_RS16315;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001300386.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 109701 110609 . + . ID=gene-AB11_RS16320;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AB11_RS16320;old_locus_tag=AB11_3031 NZ_JHDH01000138.1 Protein Homology CDS 109701 110609 . + 0 ID=cds-WP_000847985.1;Parent=gene-AB11_RS16320;Dbxref=GenBank:WP_000847985.1;Name=WP_000847985.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AB11_RS16320;product=L-threonate dehydrogenase;protein_id=WP_000847985.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 110606 111868 . + . ID=gene-AB11_RS16325;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AB11_RS16325;old_locus_tag=AB11_3032 NZ_JHDH01000138.1 Protein Homology CDS 110606 111868 . + 0 ID=cds-WP_000590403.1;Parent=gene-AB11_RS16325;Dbxref=GenBank:WP_000590403.1;Name=WP_000590403.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AB11_RS16325;product=3-oxo-tetronate kinase;protein_id=WP_000590403.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 111865 112503 . + . ID=gene-AB11_RS16330;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=AB11_RS16330;old_locus_tag=AB11_3033 NZ_JHDH01000138.1 Protein Homology CDS 111865 112503 . + 0 ID=cds-WP_001278994.1;Parent=gene-AB11_RS16330;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AB11_RS16330;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_001278994.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 112508 113284 . + . ID=gene-AB11_RS16335;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AB11_RS16335;old_locus_tag=AB11_3034 NZ_JHDH01000138.1 Protein Homology CDS 112508 113284 . + 0 ID=cds-WP_001136934.1;Parent=gene-AB11_RS16335;Dbxref=GenBank:WP_001136934.1;Name=WP_001136934.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AB11_RS16335;product=HPr family phosphocarrier protein;protein_id=WP_001136934.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 113373 114737 . + . ID=gene-AB11_RS16340;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AB11_RS16340;old_locus_tag=AB11_3035 NZ_JHDH01000138.1 Protein Homology CDS 113373 114737 . + 0 ID=cds-WP_001405700.1;Parent=gene-AB11_RS16340;Dbxref=GenBank:WP_001405700.1;Name=WP_001405700.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AB11_RS16340;product=GntP family transporter;protein_id=WP_001405700.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 114831 115823 . - . ID=gene-AB11_RS16345;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AB11_RS16345;old_locus_tag=AB11_3036 NZ_JHDH01000138.1 Protein Homology CDS 114831 115823 . - 0 ID=cds-WP_000081550.1;Parent=gene-AB11_RS16345;Dbxref=GenBank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AB11_RS16345;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 115886 116980 . - . ID=gene-AB11_RS16350;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AB11_RS16350;old_locus_tag=AB11_3037 NZ_JHDH01000138.1 Protein Homology CDS 115886 116980 . - 0 ID=cds-WP_306174120.1;Parent=gene-AB11_RS16350;Dbxref=GenBank:WP_306174120.1;Name=WP_306174120.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AB11_RS16350;product=murein hydrolase activator NlpD;protein_id=WP_306174120.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 117165 117791 . - . ID=gene-AB11_RS16355;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AB11_RS16355;old_locus_tag=AB11_3038 NZ_JHDH01000138.1 Protein Homology CDS 117165 117791 . - 0 ID=cds-WP_000254708.1;Parent=gene-AB11_RS16355;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AB11_RS16355;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 117785 118546 . - . ID=gene-AB11_RS16360;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AB11_RS16360;old_locus_tag=AB11_3039 NZ_JHDH01000138.1 Protein Homology CDS 117785 118546 . - 0 ID=cds-WP_001295182.1;Parent=gene-AB11_RS16360;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AB11_RS16360;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 118527 119576 . - . ID=gene-AB11_RS16365;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AB11_RS16365;old_locus_tag=AB11_3040 NZ_JHDH01000138.1 Protein Homology CDS 118527 119576 . - 0 ID=cds-WP_000568943.1;Parent=gene-AB11_RS16365;Dbxref=GenBank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AB11_RS16365;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 119573 120052 . - . ID=gene-AB11_RS16370;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AB11_RS16370;old_locus_tag=AB11_3041 NZ_JHDH01000138.1 Protein Homology CDS 119573 120052 . - 0 ID=cds-WP_001219242.1;Parent=gene-AB11_RS16370;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AB11_RS16370;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 120052 120762 . - . ID=gene-AB11_RS16375;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AB11_RS16375;old_locus_tag=AB11_3042 NZ_JHDH01000138.1 Protein Homology CDS 120052 120762 . - 0 ID=cds-WP_001383776.1;Parent=gene-AB11_RS16375;Dbxref=GenBank:WP_001383776.1;Name=WP_001383776.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AB11_RS16375;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_001383776.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 120781 121092 . - . ID=gene-AB11_RS16380;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AB11_RS16380;old_locus_tag=AB11_3043 NZ_JHDH01000138.1 Protein Homology CDS 120781 121092 . - 0 ID=cds-WP_000517476.1;Parent=gene-AB11_RS16380;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AB11_RS16380;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 121286 121609 . - . ID=gene-AB11_RS16385;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AB11_RS16385;old_locus_tag=AB11_3044 NZ_JHDH01000138.1 Protein Homology CDS 121286 121609 . - 0 ID=cds-WP_001246104.1;Parent=gene-AB11_RS16385;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AB11_RS16385;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 121659 122264 . - . ID=gene-AB11_RS16390;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AB11_RS16390;old_locus_tag=AB11_3045 NZ_JHDH01000138.1 Protein Homology CDS 121659 122264 . - 0 ID=cds-WP_001173673.1;Parent=gene-AB11_RS16390;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AB11_RS16390;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 122264 123691 . - . ID=gene-AB11_RS16395;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AB11_RS16395;old_locus_tag=AB11_3046 NZ_JHDH01000138.1 Protein Homology CDS 122264 123691 . - 0 ID=cds-WP_001090361.1;Parent=gene-AB11_RS16395;Dbxref=GenBank:WP_001090361.1;Name=WP_001090361.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AB11_RS16395;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090361.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 123693 124601 . - . ID=gene-AB11_RS16400;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AB11_RS16400;old_locus_tag=AB11_3047 NZ_JHDH01000138.1 Protein Homology CDS 123693 124601 . - 0 ID=cds-WP_000372108.1;Parent=gene-AB11_RS16400;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AB11_RS16400;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 124853 125890 . + . ID=gene-AB11_RS16405;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AB11_RS16405;old_locus_tag=AB11_3048 NZ_JHDH01000138.1 Protein Homology CDS 124853 125890 . + 0 ID=cds-WP_000490402.1;Parent=gene-AB11_RS16405;Dbxref=GenBank:WP_000490402.1;Name=WP_000490402.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AB11_RS16405;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490402.1;transl_table=11 NZ_JHDH01000138.1 RefSeq direct_repeat 125973 127281 . + . ID=id-NZ_JHDH01000138.1:125973..127281;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=125973..126001;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JHDH01000138.1 RefSeq gene 127378 127611 . - . ID=gene-AB11_RS16410;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AB11_RS16410;old_locus_tag=AB11_3052 NZ_JHDH01000138.1 Protein Homology CDS 127378 127611 . - 0 ID=cds-WP_044060711.1;Parent=gene-AB11_RS16410;Dbxref=GenBank:WP_044060711.1;Name=WP_044060711.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641026.1;locus_tag=AB11_RS16410;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_044060711.1;transl_table=11 NZ_JHDH01000138.1 RefSeq pseudogene 127611 129647 . - . ID=gene-AB11_RS16415;Name=AB11_RS16415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16415;old_locus_tag=AB11_3053;partial=true;pseudo=true;start_range=.,127611 NZ_JHDH01000138.1 Protein Homology CDS 127611 129647 . - 0 ID=cds-AB11_RS16415;Parent=gene-AB11_RS16415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311642.2;locus_tag=AB11_RS16415;partial=true;product=CRISPR-associated helicase/endonuclease Cas3;pseudo=true;start_range=.,127611;transl_table=11 NZ_JHDH01000138.1 RefSeq gene 129886 130998 . + . ID=gene-AB11_RS16420;Name=AB11_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16420;old_locus_tag=AB11_3054 NZ_JHDH01000138.1 Protein Homology CDS 129886 130998 . + 0 ID=cds-WP_032222612.1-7;Parent=gene-AB11_RS16420;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS16420;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ##sequence-region NZ_JHDH01000139.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000139.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000139.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000139.1 RefSeq gene 97 1194 . - . ID=gene-AB11_RS16425;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AB11_RS16425;old_locus_tag=AB11_3055 NZ_JHDH01000139.1 Protein Homology CDS 97 1194 . - 0 ID=cds-WP_000678646.1;Parent=gene-AB11_RS16425;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AB11_RS16425;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JHDH01000139.1 RefSeq gene 1403 1479 . + . ID=gene-AB11_RS16430;Name=AB11_RS16430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16430;old_locus_tag=AB11_3056 NZ_JHDH01000139.1 tRNAscan-SE tRNA 1403 1479 . + . ID=rna-AB11_RS16430;Parent=gene-AB11_RS16430;anticodon=(pos:1437..1439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16430;product=tRNA-Met NZ_JHDH01000139.1 tRNAscan-SE exon 1403 1479 . + . ID=exon-AB11_RS16430-1;Parent=rna-AB11_RS16430;anticodon=(pos:1437..1439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16430;product=tRNA-Met NZ_JHDH01000139.1 RefSeq pseudogene 1553 2047 . - . ID=gene-AB11_RS16435;Name=amiC;end_range=2047,.;gbkey=Gene;gene=amiC;gene_biotype=pseudogene;locus_tag=AB11_RS16435;old_locus_tag=AB11_3057;partial=true;pseudo=true NZ_JHDH01000139.1 Protein Homology CDS 1553 2047 . - 0 ID=cds-AB11_RS16435;Parent=gene-AB11_RS16435;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AB11_RS16435;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiC;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000140.1 1 239543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000140.1 RefSeq region 1 239543 . + . ID=NZ_JHDH01000140.1:1..239543;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000140.1 RefSeq gene 47 1159 . + . ID=gene-AB11_RS16440;Name=AB11_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16440;old_locus_tag=AB11_3058 NZ_JHDH01000140.1 Protein Homology CDS 47 1159 . + 0 ID=cds-WP_032223777.1;Parent=gene-AB11_RS16440;Dbxref=GenBank:WP_032223777.1;Name=WP_032223777.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS16440;product=IS4-like element IS421 family transposase;protein_id=WP_032223777.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 1352 1504 . - . ID=gene-AB11_RS16445;Name=AB11_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16445 NZ_JHDH01000140.1 Protein Homology CDS 1352 1504 . - 0 ID=cds-WP_000956460.1;Parent=gene-AB11_RS16445;Dbxref=GenBank:WP_000956460.1;Name=WP_000956460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AB11_RS16445;product=Hok/Gef family protein;protein_id=WP_000956460.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 1769 2503 . - . ID=gene-AB11_RS16450;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AB11_RS16450;old_locus_tag=AB11_3059 NZ_JHDH01000140.1 Protein Homology CDS 1769 2503 . - 0 ID=cds-WP_000039863.1;Parent=gene-AB11_RS16450;Dbxref=GenBank:WP_000039863.1;Name=WP_000039863.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AB11_RS16450;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039863.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 2577 4289 . - . ID=gene-AB11_RS16455;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AB11_RS16455;old_locus_tag=AB11_3060 NZ_JHDH01000140.1 Protein Homology CDS 2577 4289 . - 0 ID=cds-WP_001290699.1;Parent=gene-AB11_RS16455;Dbxref=GenBank:WP_001290699.1;Name=WP_001290699.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AB11_RS16455;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290699.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 4289 6088 . - . ID=gene-AB11_RS16460;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AB11_RS16460;old_locus_tag=AB11_3061 NZ_JHDH01000140.1 Protein Homology CDS 4289 6088 . - 0 ID=cds-WP_001469209.1;Parent=gene-AB11_RS16460;Dbxref=GenBank:WP_001469209.1;Name=WP_001469209.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AB11_RS16460;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_001469209.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 6407 6769 . + . ID=gene-AB11_RS16465;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AB11_RS16465;old_locus_tag=AB11_3063 NZ_JHDH01000140.1 Protein Homology CDS 6407 6769 . + 0 ID=cds-WP_000108294.1;Parent=gene-AB11_RS16465;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AB11_RS16465;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 6847 8118 . + . ID=gene-AB11_RS16470;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AB11_RS16470;old_locus_tag=AB11_3064 NZ_JHDH01000140.1 Protein Homology CDS 6847 8118 . + 0 ID=cds-WP_001301334.1;Parent=gene-AB11_RS16470;Dbxref=GenBank:WP_001301334.1;Name=WP_001301334.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AB11_RS16470;product=FAD-dependent oxidoreductase;protein_id=WP_001301334.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 8109 8369 . + . ID=gene-AB11_RS16475;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AB11_RS16475;old_locus_tag=AB11_3065 NZ_JHDH01000140.1 Protein Homology CDS 8109 8369 . + 0 ID=cds-WP_000109529.1;Parent=gene-AB11_RS16475;Dbxref=GenBank:WP_000109529.1;Name=WP_000109529.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AB11_RS16475;product=ferredoxin family protein;protein_id=WP_000109529.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 8386 8961 . + . ID=gene-AB11_RS16480;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AB11_RS16480;old_locus_tag=AB11_3066 NZ_JHDH01000140.1 Protein Homology CDS 8386 8961 . + 0 ID=cds-WP_001130266.1;Parent=gene-AB11_RS16480;Dbxref=GenBank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AB11_RS16480;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 9109 9969 . - . ID=gene-AB11_RS16485;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AB11_RS16485;old_locus_tag=AB11_3067 NZ_JHDH01000140.1 Protein Homology CDS 9109 9969 . - 0 ID=cds-WP_001299097.1;Parent=gene-AB11_RS16485;Dbxref=GenBank:WP_001299097.1;Name=WP_001299097.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AB11_RS16485;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001299097.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 9966 10745 . - . ID=gene-AB11_RS16490;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AB11_RS16490;old_locus_tag=AB11_3068 NZ_JHDH01000140.1 Protein Homology CDS 9966 10745 . - 0 ID=cds-WP_001735631.1;Parent=gene-AB11_RS16490;Dbxref=GenBank:WP_001735631.1;Name=WP_001735631.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AB11_RS16490;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001735631.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 10723 12132 . - . ID=gene-AB11_RS16495;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AB11_RS16495;old_locus_tag=AB11_3069 NZ_JHDH01000140.1 Protein Homology CDS 10723 12132 . - 0 ID=cds-WP_000147666.1;Parent=gene-AB11_RS16495;Dbxref=GenBank:WP_000147666.1;Name=WP_000147666.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AB11_RS16495;product=MFS transporter;protein_id=WP_000147666.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 12154 13608 . - . ID=gene-AB11_RS16500;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AB11_RS16500;old_locus_tag=AB11_3070 NZ_JHDH01000140.1 Protein Homology CDS 12154 13608 . - 0 ID=cds-WP_000059307.1;Parent=gene-AB11_RS16500;Dbxref=GenBank:WP_000059307.1;Name=WP_000059307.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026183.1;locus_tag=AB11_RS16500;product=FAD-binding oxidoreductase;protein_id=WP_000059307.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 13678 14463 . - . ID=gene-AB11_RS16505;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AB11_RS16505;old_locus_tag=AB11_3071 NZ_JHDH01000140.1 Protein Homology CDS 13678 14463 . - 0 ID=cds-WP_000021321.1;Parent=gene-AB11_RS16505;Dbxref=GenBank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AB11_RS16505;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 14782 16059 . + . ID=gene-AB11_RS16510;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AB11_RS16510;old_locus_tag=AB11_3072 NZ_JHDH01000140.1 Protein Homology CDS 14782 16059 . + 0 ID=cds-WP_001164544.1;Parent=gene-AB11_RS16510;Dbxref=GenBank:WP_001164544.1;Name=WP_001164544.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417255.1;locus_tag=AB11_RS16510;product=MFS transporter;protein_id=WP_001164544.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 16086 17564 . + . ID=gene-AB11_RS16515;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AB11_RS16515;old_locus_tag=AB11_3073 NZ_JHDH01000140.1 Protein Homology CDS 16086 17564 . + 0 ID=cds-WP_000039688.1;Parent=gene-AB11_RS16515;Dbxref=GenBank:WP_000039688.1;Name=WP_000039688.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AB11_RS16515;product=FGGY-family carbohydrate kinase;protein_id=WP_000039688.1;transl_table=11 NZ_JHDH01000140.1 RefSeq direct_repeat 18204 18902 . + . ID=id-NZ_JHDH01000140.1:18204..18902;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=18204..18231;rpt_unit_seq=ggtttatccccgctggcgcggggaacac NZ_JHDH01000140.1 RefSeq gene 19242 19913 . - . ID=gene-AB11_RS16520;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AB11_RS16520;old_locus_tag=AB11_3076 NZ_JHDH01000140.1 Protein Homology CDS 19242 19913 . - 0 ID=cds-WP_001199973.1;Parent=gene-AB11_RS16520;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AB11_RS16520;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 20052 20192 . + . ID=gene-AB11_RS16525;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AB11_RS16525;old_locus_tag=AB11_3077 NZ_JHDH01000140.1 Protein Homology CDS 20052 20192 . + 0 ID=cds-WP_001288228.1;Parent=gene-AB11_RS16525;Dbxref=GenBank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AB11_RS16525;product=cell envelope stress response protein YqcG;protein_id=WP_001288228.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 20206 21078 . + . ID=gene-AB11_RS16530;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AB11_RS16530;old_locus_tag=AB11_3078 NZ_JHDH01000140.1 Protein Homology CDS 20206 21078 . + 0 ID=cds-WP_001268460.1;Parent=gene-AB11_RS16530;Dbxref=GenBank:WP_001268460.1;Name=WP_001268460.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AB11_RS16530;product=TPM domain-containing protein;protein_id=WP_001268460.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 21138 22436 . - . ID=gene-AB11_RS16535;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AB11_RS16535;old_locus_tag=AB11_3079 NZ_JHDH01000140.1 Protein Homology CDS 21138 22436 . - 0 ID=cds-WP_000036723.1;Parent=gene-AB11_RS16535;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AB11_RS16535;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 22524 24161 . - . ID=gene-AB11_RS16540;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AB11_RS16540;old_locus_tag=AB11_3080 NZ_JHDH01000140.1 Protein Homology CDS 22524 24161 . - 0 ID=cds-WP_000210878.1;Parent=gene-AB11_RS16540;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AB11_RS16540;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 24389 25180 . - . ID=gene-AB11_RS16545;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AB11_RS16545;old_locus_tag=AB11_3081 NZ_JHDH01000140.1 Protein Homology CDS 24389 25180 . - 0 ID=cds-WP_001071648.1;Parent=gene-AB11_RS16545;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AB11_RS16545;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 25251 25586 . - . ID=gene-AB11_RS16550;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AB11_RS16550;old_locus_tag=AB11_3082 NZ_JHDH01000140.1 Protein Homology CDS 25251 25586 . - 0 ID=cds-WP_000254738.1;Parent=gene-AB11_RS16550;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AB11_RS16550;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 25586 25834 . - . ID=gene-AB11_RS16555;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AB11_RS16555;old_locus_tag=AB11_3083 NZ_JHDH01000140.1 Protein Homology CDS 25586 25834 . - 0 ID=cds-WP_000581937.1;Parent=gene-AB11_RS16555;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AB11_RS16555;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 25912 28146 . - . ID=gene-AB11_RS16560;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AB11_RS16560;old_locus_tag=AB11_3084 NZ_JHDH01000140.1 Protein Homology CDS 25912 28146 . - 0 ID=cds-WP_001581665.1;Parent=gene-AB11_RS16560;Dbxref=GenBank:WP_001581665.1;Name=WP_001581665.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AB11_RS16560;product=GTP diphosphokinase;protein_id=WP_001581665.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 28194 29495 . - . ID=gene-AB11_RS16565;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AB11_RS16565;old_locus_tag=AB11_3085 NZ_JHDH01000140.1 Protein Homology CDS 28194 29495 . - 0 ID=cds-WP_001556187.1;Parent=gene-AB11_RS16565;Dbxref=GenBank:WP_001556187.1;Name=WP_001556187.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AB11_RS16565;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_001556187.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 29552 32308 . + . ID=gene-AB11_RS16570;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AB11_RS16570;old_locus_tag=AB11_3086 NZ_JHDH01000140.1 Protein Homology CDS 29552 32308 . + 0 ID=cds-WP_000186450.1;Parent=gene-AB11_RS16570;Dbxref=GenBank:WP_000186450.1;Name=WP_000186450.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AB11_RS16570;product=two-component sensor histidine kinase BarA;protein_id=WP_000186450.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 32541 33881 . - . ID=gene-AB11_RS16575;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AB11_RS16575;old_locus_tag=AB11_3087 NZ_JHDH01000140.1 Protein Homology CDS 32541 33881 . - 0 ID=cds-WP_000098248.1;Parent=gene-AB11_RS16575;Dbxref=GenBank:WP_000098248.1;Name=WP_000098248.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AB11_RS16575;product=glucarate dehydratase;protein_id=WP_000098248.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 33902 35242 . - . ID=gene-AB11_RS16580;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AB11_RS16580;old_locus_tag=AB11_3088 NZ_JHDH01000140.1 Protein Homology CDS 33902 35242 . - 0 ID=cds-WP_001556190.1;Parent=gene-AB11_RS16580;Dbxref=GenBank:WP_001556190.1;Name=WP_001556190.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708582.2;locus_tag=AB11_RS16580;product=enolase C-terminal domain-like protein;protein_id=WP_001556190.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 35244 36596 . - . ID=gene-AB11_RS16585;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AB11_RS16585;old_locus_tag=AB11_3089 NZ_JHDH01000140.1 Protein Homology CDS 35244 36596 . - 0 ID=cds-WP_000097082.1;Parent=gene-AB11_RS16585;Dbxref=GenBank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AB11_RS16585;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 37031 37480 . - . ID=gene-AB11_RS16590;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AB11_RS16590;old_locus_tag=AB11_3092 NZ_JHDH01000140.1 Protein Homology CDS 37031 37480 . - 0 ID=cds-WP_000807751.1;Parent=gene-AB11_RS16590;Dbxref=GenBank:WP_000807751.1;Name=WP_000807751.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AB11_RS16590;product=flavodoxin;protein_id=WP_000807751.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 37498 38280 . - . ID=gene-AB11_RS16595;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AB11_RS16595;old_locus_tag=AB11_3093 NZ_JHDH01000140.1 Protein Homology CDS 37498 38280 . - 0 ID=cds-WP_001556191.1;Parent=gene-AB11_RS16595;Dbxref=GenBank:WP_001556191.1;Name=WP_001556191.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AB11_RS16595;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_001556191.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 38280 38609 . - . ID=gene-AB11_RS16600;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AB11_RS16600;old_locus_tag=AB11_3094 NZ_JHDH01000140.1 Protein Homology CDS 38280 38609 . - 0 ID=cds-WP_001556192.1;Parent=gene-AB11_RS16600;Dbxref=GenBank:WP_001556192.1;Name=WP_001556192.1;Ontology_term=GO:0044010;gbkey=CDS;gene=yqcC;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311679.1;locus_tag=AB11_RS16600;product=YqcC family protein;protein_id=WP_001556192.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 39231 39776 . - . ID=gene-AB11_RS16605;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AB11_RS16605;old_locus_tag=AB11_3095 NZ_JHDH01000140.1 Protein Homology CDS 39231 39776 . - 0 ID=cds-WP_000342431.1;Parent=gene-AB11_RS16605;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AB11_RS16605;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 39844 40692 . + . ID=gene-AB11_RS16610;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AB11_RS16610;old_locus_tag=AB11_3096 NZ_JHDH01000140.1 Protein Homology CDS 39844 40692 . + 0 ID=cds-WP_032223781.1;Parent=gene-AB11_RS16610;Dbxref=GenBank:WP_032223781.1;Name=WP_032223781.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311681.1;locus_tag=AB11_RS16610;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_032223781.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 40804 42168 . + . ID=gene-AB11_RS16615;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AB11_RS16615;old_locus_tag=AB11_3097 NZ_JHDH01000140.1 Protein Homology CDS 40804 42168 . + 0 ID=cds-WP_000627995.1;Parent=gene-AB11_RS16615;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AB11_RS16615;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 42725 44014 . + . ID=gene-AB11_RS16620;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AB11_RS16620;old_locus_tag=AB11_3098 NZ_JHDH01000140.1 Protein Homology CDS 42725 44014 . + 0 ID=cds-WP_000450476.1;Parent=gene-AB11_RS16620;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AB11_RS16620;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 44072 45439 . + . ID=gene-AB11_RS16625;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AB11_RS16625;old_locus_tag=AB11_3099 NZ_JHDH01000140.1 Protein Homology CDS 44072 45439 . + 0 ID=cds-WP_000626422.1;Parent=gene-AB11_RS16625;Dbxref=GenBank:WP_000626422.1;Name=WP_000626422.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417277.1;locus_tag=AB11_RS16625;product=L-serine ammonia-lyase II;protein_id=WP_000626422.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 45551 46306 . + . ID=gene-AB11_RS16630;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AB11_RS16630;old_locus_tag=AB11_3100 NZ_JHDH01000140.1 Protein Homology CDS 45551 46306 . + 0 ID=cds-WP_000268232.1;Parent=gene-AB11_RS16630;Dbxref=GenBank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AB11_RS16630;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 46361 47509 . - . ID=gene-AB11_RS16635;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AB11_RS16635;old_locus_tag=AB11_3101 NZ_JHDH01000140.1 Protein Homology CDS 46361 47509 . - 0 ID=cds-WP_000013588.1;Parent=gene-AB11_RS16635;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AB11_RS16635;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 47537 48184 . - . ID=gene-AB11_RS16640;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AB11_RS16640;old_locus_tag=AB11_3102 NZ_JHDH01000140.1 Protein Homology CDS 47537 48184 . - 0 ID=cds-WP_000440781.1;Parent=gene-AB11_RS16640;Dbxref=GenBank:WP_000440781.1;Name=WP_000440781.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=AB11_RS16640;product=L-fuculose-phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 48731 50046 . + . ID=gene-AB11_RS16645;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=AB11_RS16645;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 48731 50046 . + 0 ID=cds-AB11_RS16645;Parent=gene-AB11_RS16645;Note=frameshifted;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AB11_RS16645;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 50079 51854 . + . ID=gene-AB11_RS16650;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AB11_RS16650;old_locus_tag=AB11_3105 NZ_JHDH01000140.1 Protein Homology CDS 50079 51854 . + 0 ID=cds-WP_000724153.1;Parent=gene-AB11_RS16650;Dbxref=GenBank:WP_000724153.1;Name=WP_000724153.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AB11_RS16650;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 51963 53381 . + . ID=gene-AB11_RS16655;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AB11_RS16655;old_locus_tag=AB11_3106 NZ_JHDH01000140.1 Protein Homology CDS 51963 53381 . + 0 ID=cds-WP_024257776.1;Parent=gene-AB11_RS16655;Dbxref=GenBank:WP_024257776.1;Name=WP_024257776.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AB11_RS16655;product=L-fuculokinase;protein_id=WP_024257776.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 53383 53805 . + . ID=gene-AB11_RS16660;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AB11_RS16660;old_locus_tag=AB11_3107 NZ_JHDH01000140.1 Protein Homology CDS 53383 53805 . + 0 ID=cds-WP_000920840.1;Parent=gene-AB11_RS16660;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AB11_RS16660;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 53863 54594 . + . ID=gene-AB11_RS16665;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AB11_RS16665;old_locus_tag=AB11_3108 NZ_JHDH01000140.1 Protein Homology CDS 53863 54594 . + 0 ID=cds-WP_000642344.1;Parent=gene-AB11_RS16665;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AB11_RS16665;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 54638 55738 . - . ID=gene-AB11_RS16670;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AB11_RS16670;old_locus_tag=AB11_3109 NZ_JHDH01000140.1 Protein Homology CDS 54638 55738 . - 0 ID=cds-WP_001474586.1;Parent=gene-AB11_RS16670;Dbxref=GenBank:WP_001474586.1;Name=WP_001474586.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AB11_RS16670;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001474586.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 55731 56126 . - . ID=gene-AB11_RS16675;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AB11_RS16675;old_locus_tag=AB11_3110 NZ_JHDH01000140.1 Protein Homology CDS 55731 56126 . - 0 ID=cds-WP_000203905.1;Parent=gene-AB11_RS16675;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AB11_RS16675;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 56145 57062 . - . ID=gene-AB11_RS16680;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AB11_RS16680;old_locus_tag=AB11_3111 NZ_JHDH01000140.1 Protein Homology CDS 56145 57062 . - 0 ID=cds-WP_000044401.1;Parent=gene-AB11_RS16680;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AB11_RS16680;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 57413 57640 . - . ID=gene-AB11_RS16685;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AB11_RS16685;old_locus_tag=AB11_3112 NZ_JHDH01000140.1 Protein Homology CDS 57413 57640 . - 0 ID=cds-WP_000750398.1;Parent=gene-AB11_RS16685;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AB11_RS16685;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 57832 59037 . + . ID=gene-AB11_RS16690;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AB11_RS16690;old_locus_tag=AB11_3113 NZ_JHDH01000140.1 Protein Homology CDS 57832 59037 . + 0 ID=cds-WP_001300698.1;Parent=gene-AB11_RS16690;Dbxref=GenBank:WP_001300698.1;Name=WP_001300698.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AB11_RS16690;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 59037 59480 . + . ID=gene-AB11_RS16695;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AB11_RS16695;old_locus_tag=AB11_3114 NZ_JHDH01000140.1 Protein Homology CDS 59037 59480 . + 0 ID=cds-WP_000184261.1;Parent=gene-AB11_RS16695;Dbxref=GenBank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AB11_RS16695;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 59531 60337 . - . ID=gene-AB11_RS16700;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AB11_RS16700;old_locus_tag=AB11_3115 NZ_JHDH01000140.1 Protein Homology CDS 59531 60337 . - 0 ID=cds-WP_000117728.1;Parent=gene-AB11_RS16700;Dbxref=GenBank:WP_000117728.1;Name=WP_000117728.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AB11_RS16700;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 60576 61673 . - . ID=gene-AB11_RS16705;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AB11_RS16705;old_locus_tag=AB11_3116 NZ_JHDH01000140.1 Protein Homology CDS 60576 61673 . - 0 ID=cds-WP_000678646.1-2;Parent=gene-AB11_RS16705;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AB11_RS16705;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 61882 61958 . + . ID=gene-AB11_RS16710;Name=AB11_RS16710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16710;old_locus_tag=AB11_3117 NZ_JHDH01000140.1 tRNAscan-SE tRNA 61882 61958 . + . ID=rna-AB11_RS16710;Parent=gene-AB11_RS16710;anticodon=(pos:61916..61918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16710;product=tRNA-Met NZ_JHDH01000140.1 tRNAscan-SE exon 61882 61958 . + . ID=exon-AB11_RS16710-1;Parent=rna-AB11_RS16710;anticodon=(pos:61916..61918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16710;product=tRNA-Met NZ_JHDH01000140.1 RefSeq gene 61992 62068 . + . ID=gene-AB11_RS16715;Name=AB11_RS16715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16715;old_locus_tag=AB11_3118 NZ_JHDH01000140.1 tRNAscan-SE tRNA 61992 62068 . + . ID=rna-AB11_RS16715;Parent=gene-AB11_RS16715;anticodon=(pos:62026..62028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16715;product=tRNA-Met NZ_JHDH01000140.1 tRNAscan-SE exon 61992 62068 . + . ID=exon-AB11_RS16715-1;Parent=rna-AB11_RS16715;anticodon=(pos:62026..62028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16715;product=tRNA-Met NZ_JHDH01000140.1 RefSeq gene 62102 62178 . + . ID=gene-AB11_RS16720;Name=AB11_RS16720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS16720;old_locus_tag=AB11_3119 NZ_JHDH01000140.1 tRNAscan-SE tRNA 62102 62178 . + . ID=rna-AB11_RS16720;Parent=gene-AB11_RS16720;anticodon=(pos:62136..62138);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16720;product=tRNA-Met NZ_JHDH01000140.1 tRNAscan-SE exon 62102 62178 . + . ID=exon-AB11_RS16720-1;Parent=rna-AB11_RS16720;anticodon=(pos:62136..62138);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS16720;product=tRNA-Met NZ_JHDH01000140.1 RefSeq gene 62252 63505 . - . ID=gene-AB11_RS16725;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AB11_RS16725;old_locus_tag=AB11_3120 NZ_JHDH01000140.1 Protein Homology CDS 62252 63505 . - 0 ID=cds-WP_000016907.1;Parent=gene-AB11_RS16725;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AB11_RS16725;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 63737 65068 . + . ID=gene-AB11_RS16730;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AB11_RS16730;old_locus_tag=AB11_3121 NZ_JHDH01000140.1 Protein Homology CDS 63737 65068 . + 0 ID=cds-WP_000237947.1;Parent=gene-AB11_RS16730;Dbxref=GenBank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AB11_RS16730;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 65130 66956 . - . ID=gene-AB11_RS16735;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AB11_RS16735;old_locus_tag=AB11_3122 NZ_JHDH01000140.1 Protein Homology CDS 65130 66956 . - 0 ID=cds-WP_000775955.1;Parent=gene-AB11_RS16735;Dbxref=GenBank:WP_000775955.1;Name=WP_000775955.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AB11_RS16735;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775955.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 66956 70498 . - . ID=gene-AB11_RS16740;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AB11_RS16740;old_locus_tag=AB11_3123 NZ_JHDH01000140.1 Protein Homology CDS 66956 70498 . - 0 ID=cds-WP_032223784.1;Parent=gene-AB11_RS16740;Dbxref=GenBank:WP_032223784.1;Name=WP_032223784.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AB11_RS16740;product=exodeoxyribonuclease V subunit beta;protein_id=WP_032223784.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 70491 73379 . - . ID=gene-AB11_RS16745;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AB11_RS16745;old_locus_tag=AB11_3124 NZ_JHDH01000140.1 Protein Homology CDS 70491 73379 . - 0 ID=cds-WP_001138201.1;Parent=gene-AB11_RS16745;Dbxref=GenBank:WP_001138201.1;Name=WP_001138201.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AB11_RS16745;product=pitrilysin;protein_id=WP_001138201.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 73555 76923 . - . ID=gene-AB11_RS16750;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AB11_RS16750;old_locus_tag=AB11_3125 NZ_JHDH01000140.1 Protein Homology CDS 73555 76923 . - 0 ID=cds-WP_000946938.1;Parent=gene-AB11_RS16750;Dbxref=GenBank:WP_000946938.1;Name=WP_000946938.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AB11_RS16750;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946938.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 76936 77259 . - . ID=gene-AB11_RS16755;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AB11_RS16755;old_locus_tag=AB11_3126 NZ_JHDH01000140.1 Protein Homology CDS 76936 77259 . - 0 ID=cds-WP_001276460.1;Parent=gene-AB11_RS16755;Dbxref=GenBank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AB11_RS16755;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276460.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 77244 77651 . - . ID=gene-AB11_RS16760;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AB11_RS16760;old_locus_tag=AB11_3127 NZ_JHDH01000140.1 Protein Homology CDS 77244 77651 . - 0 ID=cds-WP_001078380.1;Parent=gene-AB11_RS16760;Dbxref=GenBank:WP_001078380.1;Name=WP_001078380.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AB11_RS16760;product=DUF2509 family protein;protein_id=WP_001078380.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 77648 78211 . - . ID=gene-AB11_RS16765;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AB11_RS16765;old_locus_tag=AB11_3128 NZ_JHDH01000140.1 Protein Homology CDS 77648 78211 . - 0 ID=cds-WP_001144315.1;Parent=gene-AB11_RS16765;Dbxref=GenBank:WP_001144315.1;Name=WP_001144315.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417302.1;locus_tag=AB11_RS16765;product=prepilin peptidase-dependent protein;protein_id=WP_001144315.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 78202 78672 . - . ID=gene-AB11_RS16770;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AB11_RS16770;old_locus_tag=AB11_3129 NZ_JHDH01000140.1 Protein Homology CDS 78202 78672 . - 0 ID=cds-WP_000857051.1;Parent=gene-AB11_RS16770;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AB11_RS16770;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 78856 79650 . - . ID=gene-AB11_RS16775;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AB11_RS16775;old_locus_tag=AB11_3131 NZ_JHDH01000140.1 Protein Homology CDS 78856 79650 . - 0 ID=cds-WP_000816232.1;Parent=gene-AB11_RS16775;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AB11_RS16775;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 79657 80532 . - . ID=gene-AB11_RS16780;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AB11_RS16780;old_locus_tag=AB11_3132 NZ_JHDH01000140.1 Protein Homology CDS 79657 80532 . - 0 ID=cds-WP_000204658.1;Parent=gene-AB11_RS16780;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AB11_RS16780;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 80683 82929 . - . ID=gene-AB11_RS16785;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB11_RS16785;old_locus_tag=AB11_3133 NZ_JHDH01000140.1 Protein Homology CDS 80683 82929 . - 0 ID=cds-WP_000957910.1;Parent=gene-AB11_RS16785;Dbxref=GenBank:WP_000957910.1;Name=WP_000957910.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417306.1;locus_tag=AB11_RS16785;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957910.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 82942 83472 . - . ID=gene-AB11_RS16790;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AB11_RS16790;old_locus_tag=AB11_3134 NZ_JHDH01000140.1 Protein Homology CDS 82942 83472 . - 0 ID=cds-WP_000564489.1;Parent=gene-AB11_RS16790;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AB11_RS16790;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 83825 83971 . - . ID=gene-AB11_RS25800;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AB11_RS25800 NZ_JHDH01000140.1 Protein Homology CDS 83825 83971 . - 0 ID=cds-WP_000953278.1;Parent=gene-AB11_RS25800;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AB11_RS25800;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 84157 84846 . + . ID=gene-AB11_RS16795;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AB11_RS16795;old_locus_tag=AB11_3136 NZ_JHDH01000140.1 Protein Homology CDS 84157 84846 . + 0 ID=cds-WP_000082201.1;Parent=gene-AB11_RS16795;Dbxref=GenBank:WP_000082201.1;Name=WP_000082201.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417308.1;locus_tag=AB11_RS16795;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082201.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 84915 85628 . + . ID=gene-AB11_RS16800;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AB11_RS16800;old_locus_tag=AB11_3137 NZ_JHDH01000140.1 Protein Homology CDS 84915 85628 . + 0 ID=cds-WP_000895624.1;Parent=gene-AB11_RS16800;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AB11_RS16800;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 85766 85984 . + . ID=gene-AB11_RS16805;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AB11_RS16805;old_locus_tag=AB11_3138 NZ_JHDH01000140.1 Protein Homology CDS 85766 85984 . + 0 ID=cds-WP_000758655.1;Parent=gene-AB11_RS16805;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AB11_RS16805;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 86092 87132 . + . ID=gene-AB11_RS16810;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AB11_RS16810;old_locus_tag=AB11_3139 NZ_JHDH01000140.1 Protein Homology CDS 86092 87132 . + 0 ID=cds-WP_001199295.1;Parent=gene-AB11_RS16810;Dbxref=GenBank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AB11_RS16810;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 87164 88357 . - . ID=gene-AB11_RS16815;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AB11_RS16815;old_locus_tag=AB11_3140 NZ_JHDH01000140.1 Protein Homology CDS 87164 88357 . - 0 ID=cds-WP_000004616.1;Parent=gene-AB11_RS16815;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AB11_RS16815;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 88350 90509 . - . ID=gene-AB11_RS16820;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AB11_RS16820;old_locus_tag=AB11_3141 NZ_JHDH01000140.1 Protein Homology CDS 88350 90509 . - 0 ID=cds-WP_000899054.1;Parent=gene-AB11_RS16820;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AB11_RS16820;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 91094 92125 . + . ID=gene-AB11_RS16825;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AB11_RS16825;old_locus_tag=AB11_3142 NZ_JHDH01000140.1 Protein Homology CDS 91094 92125 . + 0 ID=cds-WP_000201063.1;Parent=gene-AB11_RS16825;Dbxref=GenBank:WP_000201063.1;Name=WP_000201063.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AB11_RS16825;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201063.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 92132 93394 . - . ID=gene-AB11_RS16830;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AB11_RS16830;old_locus_tag=AB11_3143 NZ_JHDH01000140.1 Protein Homology CDS 92132 93394 . - 0 ID=cds-WP_032223786.1;Parent=gene-AB11_RS16830;Dbxref=GenBank:WP_032223786.1;Name=WP_032223786.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AB11_RS16830;product=diaminopimelate decarboxylase;protein_id=WP_032223786.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 93516 94451 . + . ID=gene-AB11_RS16835;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AB11_RS16835;old_locus_tag=AB11_3144 NZ_JHDH01000140.1 Protein Homology CDS 93516 94451 . + 0 ID=cds-WP_000741828.1;Parent=gene-AB11_RS16835;Dbxref=GenBank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AB11_RS16835;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 94438 95130 . - . ID=gene-AB11_RS16840;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AB11_RS16840;old_locus_tag=AB11_3145 NZ_JHDH01000140.1 Protein Homology CDS 94438 95130 . - 0 ID=cds-WP_032223788.1;Parent=gene-AB11_RS16840;Dbxref=GenBank:WP_032223788.1;Name=WP_032223788.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AB11_RS16840;product=amino acid racemase;protein_id=WP_032223788.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 95259 96677 . - . ID=gene-AB11_RS16845;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AB11_RS16845;old_locus_tag=AB11_3146 NZ_JHDH01000140.1 Protein Homology CDS 95259 96677 . - 0 ID=cds-WP_000256438.1;Parent=gene-AB11_RS16845;Dbxref=GenBank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AB11_RS16845;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 96992 97753 . - . ID=gene-AB11_RS16850;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AB11_RS16850;old_locus_tag=AB11_3147 NZ_JHDH01000140.1 Protein Homology CDS 96992 97753 . - 0 ID=cds-WP_000603518.1;Parent=gene-AB11_RS16850;Dbxref=GenBank:WP_000603518.1;Name=WP_000603518.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311726.1;locus_tag=AB11_RS16850;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603518.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 97783 98619 . - . ID=gene-AB11_RS16855;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AB11_RS16855;old_locus_tag=AB11_3148 NZ_JHDH01000140.1 Protein Homology CDS 97783 98619 . - 0 ID=cds-WP_000383226.1;Parent=gene-AB11_RS16855;Dbxref=GenBank:WP_000383226.1;Name=WP_000383226.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AB11_RS16855;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383226.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 98906 100087 . - . ID=gene-AB11_RS16860;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AB11_RS16860;old_locus_tag=AB11_3150 NZ_JHDH01000140.1 Protein Homology CDS 98906 100087 . - 0 ID=cds-WP_032223792.1;Parent=gene-AB11_RS16860;Dbxref=GenBank:WP_032223792.1;Name=WP_032223792.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708633.2;locus_tag=AB11_RS16860;product=acetyl-CoA C-acetyltransferase;protein_id=WP_032223792.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 100342 101571 . + . ID=gene-AB11_RS16865;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AB11_RS16865;old_locus_tag=AB11_3151 NZ_JHDH01000140.1 Protein Homology CDS 100342 101571 . + 0 ID=cds-WP_021570927.1;Parent=gene-AB11_RS16865;Dbxref=GenBank:WP_021570927.1;Name=WP_021570927.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AB11_RS16865;product=amino acid permease;protein_id=WP_021570927.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 102031 102663 . + . ID=gene-AB11_RS16870;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AB11_RS16870;old_locus_tag=AB11_3152 NZ_JHDH01000140.1 Protein Homology CDS 102031 102663 . + 0 ID=cds-WP_001305805.1;Parent=gene-AB11_RS16870;Dbxref=GenBank:WP_001305805.1;Name=WP_001305805.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AB11_RS16870;product=helix-turn-helix transcriptional regulator;protein_id=WP_001305805.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 102997 103806 . + . ID=gene-AB11_RS16875;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AB11_RS16875;old_locus_tag=AB11_3154 NZ_JHDH01000140.1 Protein Homology CDS 102997 103806 . + 0 ID=cds-WP_032220738.1;Parent=gene-AB11_RS16875;Dbxref=GenBank:WP_032220738.1;Name=WP_032220738.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AB11_RS16875;product=winged helix-turn-helix domain-containing protein;protein_id=WP_032220738.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 103799 104281 . + . ID=gene-AB11_RS16880;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=AB11_RS16880;old_locus_tag=AB11_3155 NZ_JHDH01000140.1 Protein Homology CDS 103799 104281 . + 0 ID=cds-WP_000568339.1;Parent=gene-AB11_RS16880;Dbxref=GenBank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AB11_RS16880;product=protein YqeJ;protein_id=WP_000568339.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 104314 104394 . - . ID=gene-AB11_RS16885;Name=AB11_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16885 NZ_JHDH01000140.1 Protein Homology CDS 104314 104394 . - 0 ID=cds-WP_000655821.1;Parent=gene-AB11_RS16885;Dbxref=GenBank:WP_000655821.1;Name=WP_000655821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AB11_RS16885;product=hypothetical protein;protein_id=WP_000655821.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 104430 104855 . - . ID=gene-AB11_RS16890;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AB11_RS16890 NZ_JHDH01000140.1 Protein Homology CDS 104430 104855 . - 0 ID=cds-WP_000350612.1;Parent=gene-AB11_RS16890;Dbxref=GenBank:WP_000350612.1;Name=WP_000350612.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AB11_RS16890;product=protein YqeK;protein_id=WP_000350612.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 105049 105538 . + . ID=gene-AB11_RS16895;Name=AB11_RS16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16895;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 105049 105538 . + 0 ID=cds-AB11_RS16895;Parent=gene-AB11_RS16895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AB11_RS16895;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 105763 106254 . + . ID=gene-AB11_RS16900;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;locus_tag=AB11_RS16900;old_locus_tag=AB11_3158 NZ_JHDH01000140.1 Protein Homology CDS 105763 106254 . + 0 ID=cds-WP_000102780.1;Parent=gene-AB11_RS16900;Dbxref=GenBank:WP_000102780.1;Name=WP_000102780.1;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AB11_RS16900;product=tetratricopeptide repeat protein;protein_id=WP_000102780.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 106589 107965 . + . ID=gene-AB11_RS16905;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AB11_RS16905;old_locus_tag=AB11_3159 NZ_JHDH01000140.1 Protein Homology CDS 106589 107965 . + 0 ID=cds-WP_000362702.1;Parent=gene-AB11_RS16905;Dbxref=GenBank:WP_000362702.1;Name=WP_000362702.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AB11_RS16905;product=HilA family transcriptional regulator YgeH;protein_id=WP_000362702.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 108133 108351 . + . ID=gene-AB11_RS16910;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=AB11_RS16910 NZ_JHDH01000140.1 Protein Homology CDS 108133 108351 . + 0 ID=cds-WP_000184091.1;Parent=gene-AB11_RS16910;Dbxref=GenBank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AB11_RS16910;product=protein YgeI;protein_id=WP_000184091.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 108434 108936 . + . ID=gene-AB11_RS16915;Name=AB11_RS16915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16915;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 108434 108936 . + 0 ID=cds-AB11_RS16915;Parent=gene-AB11_RS16915;Note=frameshifted;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843029.1;locus_tag=AB11_RS16915;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 108955 109587 . - . ID=gene-AB11_RS16920;Name=AB11_RS16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16920;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 108955 109587 . - 0 ID=cds-AB11_RS16920;Parent=gene-AB11_RS16920;Note=internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AB11_RS16920;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 109809 110516 . - . ID=gene-AB11_RS25250;Name=AB11_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25250 NZ_JHDH01000140.1 Protein Homology CDS 109809 110516 . - 0 ID=cds-WP_001227531.1;Parent=gene-AB11_RS25250;Dbxref=GenBank:WP_001227531.1;Name=WP_001227531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842356.1;locus_tag=AB11_RS25250;product=hypothetical protein;protein_id=WP_001227531.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 110458 111039 . - . ID=gene-AB11_RS16935;Name=AB11_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16935 NZ_JHDH01000140.1 Protein Homology CDS 110458 111039 . - 0 ID=cds-WP_001333803.1;Parent=gene-AB11_RS16935;Dbxref=GenBank:WP_001333803.1;Name=WP_001333803.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AB11_RS16935;product=type III secretion apparatus protein OrgA/MxiK;protein_id=WP_001333803.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 111055 111789 . - . ID=gene-AB11_RS16940;Name=AB11_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16940;old_locus_tag=AB11_3163 NZ_JHDH01000140.1 Protein Homology CDS 111055 111789 . - 0 ID=cds-WP_000875246.1;Parent=gene-AB11_RS16940;Dbxref=GenBank:WP_000875246.1;Name=WP_000875246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AB11_RS16940;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875246.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 111786 112118 . - . ID=gene-AB11_RS16945;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=AB11_RS16945;old_locus_tag=AB11_3164 NZ_JHDH01000140.1 Protein Homology CDS 111786 112118 . - 0 ID=cds-WP_000116719.1;Parent=gene-AB11_RS16945;Dbxref=GenBank:WP_000116719.1;Name=WP_000116719.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctI;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311744.1;locus_tag=AB11_RS16945;product=type III secretion system inner rod subunit SctI;protein_id=WP_000116719.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 112138 112377 . - . ID=gene-AB11_RS16950;Name=AB11_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16950;old_locus_tag=AB11_3165 NZ_JHDH01000140.1 Protein Homology CDS 112138 112377 . - 0 ID=cds-WP_000796272.1;Parent=gene-AB11_RS16950;Dbxref=GenBank:WP_000796272.1;Name=WP_000796272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AB11_RS16950;product=type III secretion system needle complex protein;protein_id=WP_000796272.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 112391 113572 . - . ID=gene-AB11_RS16955;Name=AB11_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16955;old_locus_tag=AB11_3166 NZ_JHDH01000140.1 Protein Homology CDS 112391 113572 . - 0 ID=cds-WP_001326506.1;Parent=gene-AB11_RS16955;Dbxref=GenBank:WP_001326506.1;Name=WP_001326506.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AB11_RS16955;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_001326506.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 113829 114329 . + . ID=gene-AB11_RS16960;Name=AB11_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16960;old_locus_tag=AB11_3167 NZ_JHDH01000140.1 Protein Homology CDS 113829 114329 . + 0 ID=cds-WP_001195875.1;Parent=gene-AB11_RS16960;Dbxref=GenBank:WP_001195875.1;Name=WP_001195875.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AB11_RS16960;product=helix-turn-helix transcriptional regulator;protein_id=WP_001195875.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 114331 114624 . + . ID=gene-AB11_RS16965;Name=AB11_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16965 NZ_JHDH01000140.1 Protein Homology CDS 114331 114624 . + 0 ID=cds-WP_000060555.1;Parent=gene-AB11_RS16965;Dbxref=GenBank:WP_000060555.1;Name=WP_000060555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=AB11_RS16965;product=invasion protein;protein_id=WP_000060555.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 114686 115806 . - . ID=gene-AB11_RS16975;Name=AB11_RS16975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16975;old_locus_tag=AB11_3169;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 114686 115806 . - 0 ID=cds-AB11_RS16975;Parent=gene-AB11_RS16975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=AB11_RS16975;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 115815 116582 . - . ID=gene-AB11_RS16980;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AB11_RS16980;old_locus_tag=AB11_3170 NZ_JHDH01000140.1 Protein Homology CDS 115815 116582 . - 0 ID=cds-WP_000503280.1;Parent=gene-AB11_RS16980;Dbxref=GenBank:WP_000503280.1;Name=WP_000503280.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=AB11_RS16980;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000503280.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 116584 116844 . - . ID=gene-AB11_RS16985;Name=AB11_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16985;old_locus_tag=AB11_3171 NZ_JHDH01000140.1 Protein Homology CDS 116584 116844 . - 0 ID=cds-WP_000341004.1;Parent=gene-AB11_RS16985;Dbxref=GenBank:WP_000341004.1;Name=WP_000341004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AB11_RS16985;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000341004.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 116854 117519 . - . ID=gene-AB11_RS16990;Name=AB11_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS16990;old_locus_tag=AB11_3172 NZ_JHDH01000140.1 Protein Homology CDS 116854 117519 . - 0 ID=cds-WP_000071554.1;Parent=gene-AB11_RS16990;Dbxref=GenBank:WP_000071554.1;Name=WP_000071554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AB11_RS16990;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_000071554.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 117509 118496 . - . ID=gene-AB11_RS16995;Name=AB11_RS16995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS16995;old_locus_tag=AB11_3173;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 117509 118496 . - 0 ID=cds-AB11_RS16995;Parent=gene-AB11_RS16995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AB11_RS16995;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 118456 118575 . - . ID=gene-AB11_RS25255;Name=AB11_RS25255;end_range=118575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25255;partial=true;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 118456 118575 . - 0 ID=cds-AB11_RS25255;Parent=gene-AB11_RS25255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=118575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344669.1;locus_tag=AB11_RS25255;partial=true;product=type III secretion system needle length determinant%2C SpaN/EivJ family;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 118588 118773 . - . ID=gene-AB11_RS25805;Name=AB11_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25805 NZ_JHDH01000140.1 GeneMarkS-2+ CDS 118588 118773 . - 0 ID=cds-WP_000578619.1;Parent=gene-AB11_RS25805;Dbxref=GenBank:WP_000578619.1;Name=WP_000578619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25805;product=hypothetical protein;protein_id=WP_000578619.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 119040 119336 . - . ID=gene-AB11_RS25810;Name=AB11_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25810 NZ_JHDH01000140.1 GeneMarkS-2+ CDS 119040 119336 . - 0 ID=cds-WP_269218348.1;Parent=gene-AB11_RS25810;Dbxref=GenBank:WP_269218348.1;Name=WP_269218348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25810;product=hypothetical protein;protein_id=WP_269218348.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 119403 120197 . - . ID=gene-AB11_RS25815;Name=ygeQ;gbkey=Gene;gene=ygeQ;gene_biotype=protein_coding;locus_tag=AB11_RS25815;old_locus_tag=AB11_3174 NZ_JHDH01000140.1 Protein Homology CDS 119403 120197 . - 0 ID=cds-WP_000676919.1;Parent=gene-AB11_RS25815;Dbxref=GenBank:WP_000676919.1;Name=WP_000676919.1;gbkey=CDS;gene=ygeQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676919.1;locus_tag=AB11_RS25815;product=protein YgeQ;protein_id=WP_000676919.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 120353 120426 . - . ID=gene-AB11_RS17005;Name=AB11_RS17005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS17005;old_locus_tag=AB11_3175 NZ_JHDH01000140.1 tRNAscan-SE tRNA 120353 120426 . - . ID=rna-AB11_RS17005;Parent=gene-AB11_RS17005;anticodon=(pos:complement(120392..120394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS17005;product=tRNA-Gly NZ_JHDH01000140.1 tRNAscan-SE exon 120353 120426 . - . ID=exon-AB11_RS17005-1;Parent=rna-AB11_RS17005;anticodon=(pos:complement(120392..120394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS17005;product=tRNA-Gly NZ_JHDH01000140.1 RefSeq gene 120505 121260 . - . ID=gene-AB11_RS17010;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AB11_RS17010;old_locus_tag=AB11_3176 NZ_JHDH01000140.1 Protein Homology CDS 120505 121260 . - 0 ID=cds-WP_001301085.1;Parent=gene-AB11_RS17010;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AB11_RS17010;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 121675 123972 . + . ID=gene-AB11_RS17015;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AB11_RS17015;old_locus_tag=AB11_3177 NZ_JHDH01000140.1 Protein Homology CDS 121675 123972 . + 0 ID=cds-WP_000388150.1;Parent=gene-AB11_RS17015;Dbxref=GenBank:WP_000388150.1;Name=WP_000388150.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AB11_RS17015;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_000388150.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 123983 124861 . + . ID=gene-AB11_RS17020;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AB11_RS17020;old_locus_tag=AB11_3178 NZ_JHDH01000140.1 Protein Homology CDS 123983 124861 . + 0 ID=cds-WP_000459182.1;Parent=gene-AB11_RS17020;Dbxref=GenBank:WP_000459182.1;Name=WP_000459182.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=AB11_RS17020;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 124858 125337 . + . ID=gene-AB11_RS17025;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AB11_RS17025;old_locus_tag=AB11_3179 NZ_JHDH01000140.1 Protein Homology CDS 124858 125337 . + 0 ID=cds-WP_032223795.1;Parent=gene-AB11_RS17025;Dbxref=GenBank:WP_032223795.1;Name=WP_032223795.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AB11_RS17025;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_032223795.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 125377 127155 . - . ID=gene-AB11_RS17030;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AB11_RS17030;old_locus_tag=AB11_3180 NZ_JHDH01000140.1 Protein Homology CDS 125377 127155 . - 0 ID=cds-WP_000417791.1;Parent=gene-AB11_RS17030;Dbxref=GenBank:WP_000417791.1;Name=WP_000417791.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=AB11_RS17030;product=sigma-54 interaction domain-containing protein;protein_id=WP_000417791.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 127634 128821 . + . ID=gene-AB11_RS17035;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AB11_RS17035;old_locus_tag=AB11_3181 NZ_JHDH01000140.1 Protein Homology CDS 127634 128821 . + 0 ID=cds-WP_000859787.1;Parent=gene-AB11_RS17035;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AB11_RS17035;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 128879 130075 . + . ID=gene-AB11_RS17040;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AB11_RS17040;old_locus_tag=AB11_3182 NZ_JHDH01000140.1 Protein Homology CDS 128879 130075 . + 0 ID=cds-WP_000110493.1;Parent=gene-AB11_RS17040;Dbxref=GenBank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AB11_RS17040;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 130133 131344 . + . ID=gene-AB11_RS17045;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AB11_RS17045;old_locus_tag=AB11_3183 NZ_JHDH01000140.1 Protein Homology CDS 130133 131344 . + 0 ID=cds-WP_001107125.1;Parent=gene-AB11_RS17045;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AB11_RS17045;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 131397 132782 . + . ID=gene-AB11_RS17050;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AB11_RS17050;old_locus_tag=AB11_3184 NZ_JHDH01000140.1 Protein Homology CDS 131397 132782 . + 0 ID=cds-WP_021570930.1;Parent=gene-AB11_RS17050;Dbxref=GenBank:WP_021570930.1;Name=WP_021570930.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AB11_RS17050;product=D-phenylhydantoinase;protein_id=WP_021570930.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 132830 133762 . + . ID=gene-AB11_RS17055;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AB11_RS17055;old_locus_tag=AB11_3185 NZ_JHDH01000140.1 Protein Homology CDS 132830 133762 . + 0 ID=cds-WP_000037992.1;Parent=gene-AB11_RS17055;Dbxref=GenBank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AB11_RS17055;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 133983 135608 . - . ID=gene-AB11_RS17060;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AB11_RS17060;old_locus_tag=AB11_3186 NZ_JHDH01000140.1 Protein Homology CDS 133983 135608 . - 0 ID=cds-WP_001020381.1;Parent=gene-AB11_RS17060;Dbxref=GenBank:WP_001020381.1;Name=WP_001020381.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AB11_RS17060;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_001020381.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 135656 136426 . - . ID=gene-AB11_RS17065;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AB11_RS17065 NZ_JHDH01000140.1 Protein Homology CDS 135656 136426 . - 0 ID=cds-WP_001298920.1;Parent=gene-AB11_RS17065;Dbxref=GenBank:WP_001298920.1;Name=WP_001298920.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AB11_RS17065;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_001298920.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 136529 137107 . + . ID=gene-AB11_RS17070;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AB11_RS17070;old_locus_tag=AB11_3188 NZ_JHDH01000140.1 Protein Homology CDS 136529 137107 . + 0 ID=cds-WP_001272828.1;Parent=gene-AB11_RS17070;Dbxref=GenBank:WP_001272828.1;Name=WP_001272828.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AB11_RS17070;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272828.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 137429 140527 . + . ID=gene-AB11_RS17075;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AB11_RS17075;old_locus_tag=AB11_3189 NZ_JHDH01000140.1 Protein Homology CDS 137429 140527 . + 0 ID=cds-WP_001742184.1;Parent=gene-AB11_RS17075;Dbxref=GenBank:WP_001742184.1;Name=WP_001742184.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AB11_RS17075;product=putative selenate reductase subunit YgfK;protein_id=WP_001742184.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 140530 141858 . + . ID=gene-AB11_RS17080;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AB11_RS17080;old_locus_tag=AB11_3190 NZ_JHDH01000140.1 Protein Homology CDS 140530 141858 . + 0 ID=cds-WP_000906252.1;Parent=gene-AB11_RS17080;Dbxref=GenBank:WP_000906252.1;Name=WP_000906252.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417355.4;locus_tag=AB11_RS17080;product=putative aminohydrolase SsnA;protein_id=WP_000906252.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 141909 142688 . + . ID=gene-AB11_RS17085;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AB11_RS17085;old_locus_tag=AB11_3191 NZ_JHDH01000140.1 Protein Homology CDS 141909 142688 . + 0 ID=cds-WP_000572462.1;Parent=gene-AB11_RS17085;Dbxref=GenBank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AB11_RS17085;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572462.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 142685 145555 . + . ID=gene-AB11_RS17090;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AB11_RS17090;old_locus_tag=AB11_3192 NZ_JHDH01000140.1 Protein Homology CDS 142685 145555 . + 0 ID=cds-WP_000583611.1;Parent=gene-AB11_RS17090;Dbxref=GenBank:WP_000583611.1;Name=WP_000583611.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AB11_RS17090;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583611.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 145720 147120 . + . ID=gene-AB11_RS17095;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AB11_RS17095;old_locus_tag=AB11_3193 NZ_JHDH01000140.1 Protein Homology CDS 145720 147120 . + 0 ID=cds-WP_001280192.1;Parent=gene-AB11_RS17095;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AB11_RS17095;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 147138 148454 . + . ID=gene-AB11_RS17100;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AB11_RS17100;old_locus_tag=AB11_3194 NZ_JHDH01000140.1 Protein Homology CDS 147138 148454 . + 0 ID=cds-WP_001299798.1;Parent=gene-AB11_RS17100;Dbxref=GenBank:WP_001299798.1;Name=WP_001299798.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AB11_RS17100;product=guanine deaminase;protein_id=WP_001299798.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 148490 149857 . + . ID=gene-AB11_RS17105;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AB11_RS17105;old_locus_tag=AB11_3195 NZ_JHDH01000140.1 Protein Homology CDS 148490 149857 . + 0 ID=cds-WP_000012163.1;Parent=gene-AB11_RS17105;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AB11_RS17105;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 149893 150381 . - . ID=gene-AB11_RS17110;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AB11_RS17110;old_locus_tag=AB11_3196 NZ_JHDH01000140.1 Protein Homology CDS 149893 150381 . - 0 ID=cds-WP_000838422.1;Parent=gene-AB11_RS17110;Dbxref=GenBank:WP_000838422.1;Name=WP_000838422.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AB11_RS17110;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838422.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 150381 152300 . - . ID=gene-AB11_RS17115;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AB11_RS17115;old_locus_tag=AB11_3197 NZ_JHDH01000140.1 Protein Homology CDS 150381 152300 . - 0 ID=cds-WP_032223798.1;Parent=gene-AB11_RS17115;Dbxref=GenBank:WP_032223798.1;Name=WP_032223798.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AB11_RS17115;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_032223798.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 152736 154184 . + . ID=gene-AB11_RS17120;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AB11_RS17120;old_locus_tag=AB11_3198 NZ_JHDH01000140.1 Protein Homology CDS 152736 154184 . + 0 ID=cds-WP_001295374.1;Parent=gene-AB11_RS17120;Dbxref=GenBank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AB11_RS17120;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 154186 154311 . + . ID=gene-AB11_RS17125;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AB11_RS17125;old_locus_tag=AB11_3199 NZ_JHDH01000140.1 Protein Homology CDS 154186 154311 . + 0 ID=cds-WP_001050745.1;Parent=gene-AB11_RS17125;Dbxref=GenBank:WP_001050745.1;Name=WP_001050745.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AB11_RS17125;product=protein YqfG;protein_id=WP_001050745.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 154308 154379 . - . ID=gene-AB11_RS17130;Name=AB11_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17130 NZ_JHDH01000140.1 Protein Homology CDS 154308 154379 . - 0 ID=cds-WP_120795390.1;Parent=gene-AB11_RS17130;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AB11_RS17130;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 154434 154982 . + . ID=gene-AB11_RS17135;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AB11_RS17135;old_locus_tag=AB11_3200 NZ_JHDH01000140.1 Protein Homology CDS 154434 154982 . + 0 ID=cds-WP_001192790.1;Parent=gene-AB11_RS17135;Dbxref=GenBank:WP_001192790.1;Name=WP_001192790.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311788.1;locus_tag=AB11_RS17135;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192790.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 155025 156542 . - . ID=gene-AB11_RS17140;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB11_RS17140;old_locus_tag=AB11_3201 NZ_JHDH01000140.1 Protein Homology CDS 155025 156542 . - 0 ID=cds-WP_001618837.1;Parent=gene-AB11_RS17140;Dbxref=GenBank:WP_001618837.1;Name=WP_001618837.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB11_RS17140;product=lysine--tRNA ligase;protein_id=WP_001618837.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 156552 157650 . - . ID=gene-AB11_RS17145;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AB11_RS17145;old_locus_tag=AB11_3202 NZ_JHDH01000140.1 Protein Homology CDS 157576 157650 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB11_RS17145;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB11_RS17145;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDH01000140.1 Protein Homology CDS 156552 157574 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB11_RS17145;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB11_RS17145;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 157741 159474 . - . ID=gene-AB11_RS17150;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AB11_RS17150;old_locus_tag=AB11_3204 NZ_JHDH01000140.1 Protein Homology CDS 157741 159474 . - 0 ID=cds-WP_000813201.1;Parent=gene-AB11_RS17150;Dbxref=GenBank:WP_000813201.1;Name=WP_000813201.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417368.1;locus_tag=AB11_RS17150;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813201.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 159480 160190 . - . ID=gene-AB11_RS17155;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AB11_RS17155;old_locus_tag=AB11_3205 NZ_JHDH01000140.1 Protein Homology CDS 159480 160190 . - 0 ID=cds-WP_000715214.1;Parent=gene-AB11_RS17155;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AB11_RS17155;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 160215 161111 . - . ID=gene-AB11_RS17160;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AB11_RS17160;old_locus_tag=AB11_3206 NZ_JHDH01000140.1 Protein Homology CDS 160215 161111 . - 0 ID=cds-WP_000806638.1;Parent=gene-AB11_RS17160;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AB11_RS17160;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 161223 161744 . + . ID=gene-AB11_RS17165;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AB11_RS17165;old_locus_tag=AB11_3207 NZ_JHDH01000140.1 Protein Homology CDS 161223 161744 . + 0 ID=cds-WP_001055874.1;Parent=gene-AB11_RS17165;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AB11_RS17165;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 161784 162191 . - . ID=gene-AB11_RS17170;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AB11_RS17170;old_locus_tag=AB11_3208 NZ_JHDH01000140.1 Protein Homology CDS 161784 162191 . - 0 ID=cds-WP_000244777.1;Parent=gene-AB11_RS17170;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygfX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AB11_RS17170;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 162172 162438 . - . ID=gene-AB11_RS17175;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AB11_RS17175;old_locus_tag=AB11_3209 NZ_JHDH01000140.1 Protein Homology CDS 162172 162438 . - 0 ID=cds-WP_000354046.1;Parent=gene-AB11_RS17175;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AB11_RS17175;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 162681 163661 . + . ID=gene-AB11_RS17180;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AB11_RS17180;old_locus_tag=AB11_3211 NZ_JHDH01000140.1 Protein Homology CDS 162681 163661 . + 0 ID=cds-WP_001514522.1;Parent=gene-AB11_RS17180;Dbxref=GenBank:WP_001514522.1;Name=WP_001514522.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AB11_RS17180;product=tRNA-modifying protein YgfZ;protein_id=WP_001514522.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 163857 164516 . - . ID=gene-AB11_RS17185;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AB11_RS17185;old_locus_tag=AB11_3212 NZ_JHDH01000140.1 Protein Homology CDS 163857 164516 . - 0 ID=cds-WP_000250274.1;Parent=gene-AB11_RS17185;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AB11_RS17185;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 164680 164991 . - . ID=gene-AB11_RS17190;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AB11_RS17190;old_locus_tag=AB11_3213 NZ_JHDH01000140.1 Protein Homology CDS 164680 164991 . - 0 ID=cds-WP_001514524.1;Parent=gene-AB11_RS17190;Dbxref=GenBank:WP_001514524.1;Name=WP_001514524.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AB11_RS17190;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001514524.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 165036 166469 . + . ID=gene-AB11_RS17195;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AB11_RS17195;old_locus_tag=AB11_3214 NZ_JHDH01000140.1 Protein Homology CDS 165036 166469 . + 0 ID=cds-WP_001514525.1;Parent=gene-AB11_RS17195;Dbxref=GenBank:WP_001514525.1;Name=WP_001514525.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311800.2;locus_tag=AB11_RS17195;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001514525.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 166635 169508 . - . ID=gene-AB11_RS17200;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AB11_RS17200;old_locus_tag=AB11_3215 NZ_JHDH01000140.1 Protein Homology CDS 166635 169508 . - 0 ID=cds-WP_004017789.1;Parent=gene-AB11_RS17200;Dbxref=GenBank:WP_004017789.1;Name=WP_004017789.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=AB11_RS17200;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_004017789.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 169627 170016 . - . ID=gene-AB11_RS17205;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AB11_RS17205;old_locus_tag=AB11_3216 NZ_JHDH01000140.1 Protein Homology CDS 169627 170016 . - 0 ID=cds-WP_001295377.1;Parent=gene-AB11_RS17205;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AB11_RS17205;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 170040 171134 . - . ID=gene-AB11_RS17210;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AB11_RS17210;old_locus_tag=AB11_3217 NZ_JHDH01000140.1 Protein Homology CDS 170040 171134 . - 0 ID=cds-WP_000068701.1;Parent=gene-AB11_RS17210;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AB11_RS17210;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 171424 171507 . + . ID=gene-AB11_RS17215;Name=AB11_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17215;old_locus_tag=AB11_3218 NZ_JHDH01000140.1 Protein Homology CDS 171424 171507 . + 0 ID=cds-WP_122056850.1;Parent=gene-AB11_RS17215;Dbxref=GenBank:WP_122056850.1;Name=WP_122056850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AB11_RS17215;product=hypothetical protein;protein_id=WP_122056850.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 171581 172783 . - . ID=gene-AB11_RS17220;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AB11_RS17220;old_locus_tag=AB11_3219 NZ_JHDH01000140.1 Protein Homology CDS 171581 172783 . - 0 ID=cds-WP_001192185.1;Parent=gene-AB11_RS17220;Dbxref=GenBank:WP_001192185.1;Name=WP_001192185.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AB11_RS17220;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192185.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 172806 173984 . - . ID=gene-AB11_RS17225;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AB11_RS17225;old_locus_tag=AB11_3220 NZ_JHDH01000140.1 Protein Homology CDS 172806 173984 . - 0 ID=cds-WP_032223801.1;Parent=gene-AB11_RS17225;Dbxref=GenBank:WP_032223801.1;Name=WP_032223801.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AB11_RS17225;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_032223801.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 173981 175306 . - . ID=gene-AB11_RS17230;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AB11_RS17230;old_locus_tag=AB11_3221 NZ_JHDH01000140.1 Protein Homology CDS 173981 175306 . - 0 ID=cds-WP_001290123.1;Parent=gene-AB11_RS17230;Dbxref=GenBank:WP_001290123.1;Name=WP_001290123.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311806.1;locus_tag=AB11_RS17230;product=Xaa-Pro aminopeptidase;protein_id=WP_001290123.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 175332 175910 . - . ID=gene-AB11_RS17235;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AB11_RS17235;old_locus_tag=AB11_3222 NZ_JHDH01000140.1 Protein Homology CDS 175332 175910 . - 0 ID=cds-WP_001295378.1;Parent=gene-AB11_RS17235;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AB11_RS17235;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 176078 176407 . + . ID=gene-AB11_RS17240;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AB11_RS17240;old_locus_tag=AB11_3223 NZ_JHDH01000140.1 Protein Homology CDS 176078 176407 . + 0 ID=cds-WP_001276008.1;Parent=gene-AB11_RS17240;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AB11_RS17240;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 176449 176632 . + . ID=gene-AB11_RS17245;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AB11_RS17245 NZ_JHDH01000140.1 cmsearch ncRNA 176449 176632 . + . ID=rna-AB11_RS17245;Parent=gene-AB11_RS17245;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS17245;product=6S RNA NZ_JHDH01000140.1 cmsearch exon 176449 176632 . + . ID=exon-AB11_RS17245-1;Parent=rna-AB11_RS17245;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS17245;product=6S RNA NZ_JHDH01000140.1 RefSeq gene 176653 177255 . + . ID=gene-AB11_RS17250;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AB11_RS17250;old_locus_tag=AB11_3224 NZ_JHDH01000140.1 Protein Homology CDS 176653 177255 . + 0 ID=cds-WP_000192742.1;Parent=gene-AB11_RS17250;Dbxref=GenBank:WP_000192742.1;Name=WP_000192742.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AB11_RS17250;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192742.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 177356 177415 . - . ID=gene-AB11_RS17255;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AB11_RS17255 NZ_JHDH01000140.1 Protein Homology CDS 177356 177415 . - 0 ID=cds-WP_010723220.1;Parent=gene-AB11_RS17255;Dbxref=GenBank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AB11_RS17255;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_010723220.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 177644 178876 . - . ID=gene-AB11_RS17260;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AB11_RS17260;old_locus_tag=AB11_3225 NZ_JHDH01000140.1 Protein Homology CDS 177644 178876 . - 0 ID=cds-WP_001151604.1;Parent=gene-AB11_RS17260;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AB11_RS17260;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 179132 179791 . - . ID=gene-AB11_RS17265;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AB11_RS17265;old_locus_tag=AB11_3227 NZ_JHDH01000140.1 Protein Homology CDS 179132 179791 . - 0 ID=cds-WP_000189743.1;Parent=gene-AB11_RS17265;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AB11_RS17265;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 179847 180077 . - . ID=gene-AB11_RS17270;Name=AB11_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17270;old_locus_tag=AB11_3228 NZ_JHDH01000140.1 Protein Homology CDS 179847 180077 . - 0 ID=cds-WP_001322018.1;Parent=gene-AB11_RS17270;Dbxref=GenBank:WP_001322018.1;Name=WP_001322018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AB11_RS17270;product=hypothetical protein;protein_id=WP_001322018.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 180219 181112 . + . ID=gene-AB11_RS17275;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AB11_RS17275;old_locus_tag=AB11_3230 NZ_JHDH01000140.1 Protein Homology CDS 180219 181112 . + 0 ID=cds-WP_000828351.1;Parent=gene-AB11_RS17275;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AB11_RS17275;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 181316 183460 . + . ID=gene-AB11_RS17280;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AB11_RS17280;old_locus_tag=AB11_3231 NZ_JHDH01000140.1 Protein Homology CDS 181316 183460 . + 0 ID=cds-WP_000073223.1;Parent=gene-AB11_RS17280;Dbxref=GenBank:WP_000073223.1;Name=WP_000073223.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AB11_RS17280;product=methylmalonyl-CoA mutase;protein_id=WP_000073223.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 183453 184448 . + . ID=gene-AB11_RS17285;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AB11_RS17285;old_locus_tag=AB11_3232 NZ_JHDH01000140.1 Protein Homology CDS 183453 184448 . + 0 ID=cds-WP_000606525.1;Parent=gene-AB11_RS17285;Dbxref=GenBank:WP_000606525.1;Name=WP_000606525.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AB11_RS17285;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606525.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 184459 185244 . + . ID=gene-AB11_RS17290;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AB11_RS17290;old_locus_tag=AB11_3233 NZ_JHDH01000140.1 Protein Homology CDS 184459 185244 . + 0 ID=cds-WP_000122080.1;Parent=gene-AB11_RS17290;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AB11_RS17290;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 185268 186746 . + . ID=gene-AB11_RS17295;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AB11_RS17295;old_locus_tag=AB11_3234 NZ_JHDH01000140.1 Protein Homology CDS 185268 186746 . + 0 ID=cds-WP_000449965.1;Parent=gene-AB11_RS17295;Dbxref=GenBank:WP_000449965.1;Name=WP_000449965.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AB11_RS17295;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449965.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 186743 187639 . - . ID=gene-AB11_RS17300;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AB11_RS17300;old_locus_tag=AB11_3235 NZ_JHDH01000140.1 Protein Homology CDS 186743 187639 . - 0 ID=cds-WP_000350807.1;Parent=gene-AB11_RS17300;Dbxref=GenBank:WP_000350807.1;Name=WP_000350807.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AB11_RS17300;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350807.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 187806 188546 . - . ID=gene-AB11_RS17305;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AB11_RS17305;old_locus_tag=AB11_3237 NZ_JHDH01000140.1 Protein Homology CDS 187806 188546 . - 0 ID=cds-WP_000669834.1;Parent=gene-AB11_RS17305;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AB11_RS17305;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 188639 189274 . - . ID=gene-AB11_RS17310;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AB11_RS17310;old_locus_tag=AB11_3238 NZ_JHDH01000140.1 Protein Homology CDS 188639 189274 . - 0 ID=cds-WP_032223805.1;Parent=gene-AB11_RS17310;Dbxref=GenBank:WP_032223805.1;Name=WP_032223805.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AB11_RS17310;product=arginine exporter ArgO;protein_id=WP_032223805.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 189413 190273 . - . ID=gene-AB11_RS17315;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AB11_RS17315;old_locus_tag=AB11_3239 NZ_JHDH01000140.1 Protein Homology CDS 189413 190273 . - 0 ID=cds-WP_000389818.1;Parent=gene-AB11_RS17315;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AB11_RS17315;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 190631 191710 . - . ID=gene-AB11_RS17320;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AB11_RS17320;old_locus_tag=AB11_3240 NZ_JHDH01000140.1 Protein Homology CDS 190631 191710 . - 0 ID=cds-WP_000034372.1;Parent=gene-AB11_RS17320;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AB11_RS17320;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 191925 193088 . - . ID=gene-AB11_RS17325;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AB11_RS17325;old_locus_tag=AB11_3241 NZ_JHDH01000140.1 Protein Homology CDS 191925 193088 . - 0 ID=cds-WP_000111269.1;Parent=gene-AB11_RS17325;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AB11_RS17325;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 193138 194157 . - . ID=gene-AB11_RS17330;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AB11_RS17330;old_locus_tag=AB11_3242 NZ_JHDH01000140.1 Protein Homology CDS 193138 194157 . - 0 ID=cds-WP_001428116.1;Parent=gene-AB11_RS17330;Dbxref=GenBank:WP_001428116.1;Name=WP_001428116.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AB11_RS17330;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_001428116.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 194442 195155 . - . ID=gene-AB11_RS17335;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;locus_tag=AB11_RS17335;old_locus_tag=AB11_3243 NZ_JHDH01000140.1 Protein Homology CDS 194442 195155 . - 0 ID=cds-WP_000687705.1;Parent=gene-AB11_RS17335;Dbxref=GenBank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;gene=yggC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AB11_RS17335;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687705.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 195152 195661 . - . ID=gene-AB11_RS17340;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AB11_RS17340;old_locus_tag=AB11_3244 NZ_JHDH01000140.1 Protein Homology CDS 195152 195661 . - 0 ID=cds-WP_000224147.1;Parent=gene-AB11_RS17340;Dbxref=GenBank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AB11_RS17340;product=fumarase E;protein_id=WP_000224147.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 195683 196648 . - . ID=gene-AB11_RS17345;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB11_RS17345;old_locus_tag=AB11_3245 NZ_JHDH01000140.1 Protein Homology CDS 195683 196648 . - 0 ID=cds-WP_000987283.1;Parent=gene-AB11_RS17345;Dbxref=GenBank:WP_000987283.1;Name=WP_000987283.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AB11_RS17345;product=class II fructose-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 196645 197922 . - . ID=gene-AB11_RS17350;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AB11_RS17350;old_locus_tag=AB11_3246 NZ_JHDH01000140.1 Protein Homology CDS 196645 197922 . - 0 ID=cds-WP_000853247.1;Parent=gene-AB11_RS17350;Dbxref=GenBank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AB11_RS17350;product=zinc-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 197937 199325 . - . ID=gene-AB11_RS17355;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AB11_RS17355;old_locus_tag=AB11_3247 NZ_JHDH01000140.1 Protein Homology CDS 197937 199325 . - 0 ID=cds-WP_000428805.1;Parent=gene-AB11_RS17355;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AB11_RS17355;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 199353 199796 . - . ID=gene-AB11_RS17360;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AB11_RS17360;old_locus_tag=AB11_3248 NZ_JHDH01000140.1 Protein Homology CDS 199353 199796 . - 0 ID=cds-WP_001239650.1;Parent=gene-AB11_RS17360;Dbxref=GenBank:WP_001239650.1;Name=WP_001239650.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AB11_RS17360;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239650.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 200110 202101 . - . ID=gene-AB11_RS17365;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB11_RS17365;old_locus_tag=AB11_3249 NZ_JHDH01000140.1 Protein Homology CDS 200110 202101 . - 0 ID=cds-WP_000098614.1;Parent=gene-AB11_RS17365;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AB11_RS17365;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 202379 203137 . + . ID=gene-AB11_RS17370;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AB11_RS17370;old_locus_tag=AB11_3250 NZ_JHDH01000140.1 Protein Homology CDS 202379 203137 . + 0 ID=cds-WP_001326497.1;Parent=gene-AB11_RS17370;Dbxref=GenBank:WP_001326497.1;Name=WP_001326497.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AB11_RS17370;product=metalloprotease LoiP;protein_id=WP_001326497.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 203343 204263 . - . ID=gene-AB11_RS17375;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AB11_RS17375;old_locus_tag=AB11_3251 NZ_JHDH01000140.1 Protein Homology CDS 203343 204263 . - 0 ID=cds-WP_000105566.1;Parent=gene-AB11_RS17375;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AB11_RS17375;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 204401 206377 . - . ID=gene-AB11_RS17380;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AB11_RS17380;old_locus_tag=AB11_3252 NZ_JHDH01000140.1 Protein Homology CDS 204401 206377 . - 0 ID=cds-WP_001300904.1;Parent=gene-AB11_RS17380;Dbxref=GenBank:WP_001300904.1;Name=WP_001300904.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AB11_RS17380;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 206386 206517 . - . ID=gene-AB11_RS17385;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AB11_RS17385;old_locus_tag=AB11_3253 NZ_JHDH01000140.1 Protein Homology CDS 206386 206517 . - 0 ID=cds-WP_001297406.1;Parent=gene-AB11_RS17385;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AB11_RS17385;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 206611 206754 . - . ID=gene-AB11_RS25825;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AB11_RS25825 NZ_JHDH01000140.1 Protein Homology CDS 206611 206754 . - 0 ID=cds-WP_001297404.1;Parent=gene-AB11_RS25825;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AB11_RS25825;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 206865 207116 . - . ID=gene-AB11_RS25830;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AB11_RS25830 NZ_JHDH01000140.1 Protein Homology CDS 206865 207116 . - 0 ID=cds-WP_001326496.1;Parent=gene-AB11_RS25830;Dbxref=GenBank:WP_001326496.1;Name=WP_001326496.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AB11_RS25830;product=protein YqgD;protein_id=WP_001326496.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 207172 208326 . + . ID=gene-AB11_RS17395;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AB11_RS17395;old_locus_tag=AB11_3255 NZ_JHDH01000140.1 Protein Homology CDS 207172 208326 . + 0 ID=cds-WP_001062128.1;Parent=gene-AB11_RS17395;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AB11_RS17395;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 208750 210144 . + . ID=gene-AB11_RS17400;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AB11_RS17400;old_locus_tag=AB11_3256 NZ_JHDH01000140.1 Protein Homology CDS 208750 210144 . + 0 ID=cds-WP_001112301.1;Parent=gene-AB11_RS17400;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AB11_RS17400;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 210221 210718 . + . ID=gene-AB11_RS17405;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AB11_RS17405;old_locus_tag=AB11_3257 NZ_JHDH01000140.1 Protein Homology CDS 210221 210718 . + 0 ID=cds-WP_001300769.1;Parent=gene-AB11_RS17405;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AB11_RS17405;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 210813 211520 . + . ID=gene-AB11_RS17410;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AB11_RS17410;old_locus_tag=AB11_3258 NZ_JHDH01000140.1 Protein Homology CDS 210813 211520 . + 0 ID=cds-WP_000286500.1;Parent=gene-AB11_RS17410;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AB11_RS17410;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 211600 212331 . + . ID=gene-AB11_RS17415;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AB11_RS17415;old_locus_tag=AB11_3259 NZ_JHDH01000140.1 Protein Homology CDS 211600 212331 . + 0 ID=cds-WP_001222509.1;Parent=gene-AB11_RS17415;Dbxref=GenBank:WP_001222509.1;Name=WP_001222509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AB11_RS17415;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222509.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 212344 213294 . + . ID=gene-AB11_RS17420;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AB11_RS17420;old_locus_tag=AB11_3260 NZ_JHDH01000140.1 Protein Homology CDS 212344 213294 . + 0 ID=cds-WP_000593273.1;Parent=gene-AB11_RS17420;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AB11_RS17420;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 213403 213966 . + . ID=gene-AB11_RS17425;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AB11_RS17425;old_locus_tag=AB11_3261 NZ_JHDH01000140.1 Protein Homology CDS 213403 213966 . + 0 ID=cds-WP_001053178.1;Parent=gene-AB11_RS17425;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AB11_RS17425;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 213966 214382 . + . ID=gene-AB11_RS17430;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AB11_RS17430;old_locus_tag=AB11_3262 NZ_JHDH01000140.1 Protein Homology CDS 213966 214382 . + 0 ID=cds-WP_000017106.1;Parent=gene-AB11_RS17430;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AB11_RS17430;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 214389 214517 . - . ID=gene-AB11_RS25835;Name=AB11_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25835;old_locus_tag=AB11_3263 NZ_JHDH01000140.1 GeneMarkS-2+ CDS 214389 214517 . - 0 ID=cds-WP_001278270.1;Parent=gene-AB11_RS25835;Dbxref=GenBank:WP_001278270.1;Name=WP_001278270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25835;product=hypothetical protein;protein_id=WP_001278270.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 214566 215546 . - . ID=gene-AB11_RS17435;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AB11_RS17435;old_locus_tag=AB11_3264 NZ_JHDH01000140.1 Protein Homology CDS 214566 215546 . - 0 ID=cds-WP_001295381.1;Parent=gene-AB11_RS17435;Dbxref=GenBank:WP_001295381.1;Name=WP_001295381.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AB11_RS17435;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001295381.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 215564 216268 . + . ID=gene-AB11_RS17440;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AB11_RS17440;old_locus_tag=AB11_3265 NZ_JHDH01000140.1 Protein Homology CDS 215564 216268 . + 0 ID=cds-WP_000997795.1;Parent=gene-AB11_RS17440;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AB11_RS17440;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 216286 216852 . + . ID=gene-AB11_RS17445;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AB11_RS17445;old_locus_tag=AB11_3266 NZ_JHDH01000140.1 Protein Homology CDS 216286 216852 . + 0 ID=cds-WP_001094831.1;Parent=gene-AB11_RS17445;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AB11_RS17445;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 216849 217139 . + . ID=gene-AB11_RS17450;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AB11_RS17450;old_locus_tag=AB11_3267 NZ_JHDH01000140.1 Protein Homology CDS 216849 217139 . + 0 ID=cds-WP_001277222.1;Parent=gene-AB11_RS17450;Dbxref=GenBank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AB11_RS17450;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 217147 217740 . + . ID=gene-AB11_RS17455;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AB11_RS17455;old_locus_tag=AB11_3268 NZ_JHDH01000140.1 Protein Homology CDS 217147 217740 . + 0 ID=cds-WP_001174735.1;Parent=gene-AB11_RS17455;Dbxref=GenBank:WP_001174735.1;Name=WP_001174735.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708719.1;locus_tag=AB11_RS17455;product=XTP/dITP diphosphatase;protein_id=WP_001174735.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 217733 218869 . + . ID=gene-AB11_RS17460;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AB11_RS17460;old_locus_tag=AB11_3269 NZ_JHDH01000140.1 Protein Homology CDS 217733 218869 . + 0 ID=cds-WP_000239928.1;Parent=gene-AB11_RS17460;Dbxref=GenBank:WP_000239928.1;Name=WP_000239928.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AB11_RS17460;product=radical SAM family heme chaperone HemW;protein_id=WP_000239928.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 219024 220031 . - . ID=gene-AB11_RS17465;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AB11_RS17465;old_locus_tag=AB11_3270 NZ_JHDH01000140.1 Protein Homology CDS 219024 220031 . - 0 ID=cds-WP_000745217.1;Parent=gene-AB11_RS17465;Dbxref=GenBank:WP_000745217.1;Name=WP_000745217.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AB11_RS17465;product=DUF1202 family protein;protein_id=WP_000745217.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 220148 221194 . - . ID=gene-AB11_RS17470;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AB11_RS17470;old_locus_tag=AB11_3271 NZ_JHDH01000140.1 Protein Homology CDS 220148 221194 . - 0 ID=cds-WP_000394131.1;Parent=gene-AB11_RS17470;Dbxref=GenBank:WP_000394131.1;Name=WP_000394131.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417432.1;locus_tag=AB11_RS17470;product=L-asparaginase 2;protein_id=WP_000394131.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 221370 222089 . - . ID=gene-AB11_RS17475;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AB11_RS17475;old_locus_tag=AB11_3272 NZ_JHDH01000140.1 Protein Homology CDS 221370 222089 . - 0 ID=cds-WP_000984796.1;Parent=gene-AB11_RS17475;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AB11_RS17475;product=YggN family protein;protein_id=WP_000984796.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 222110 222250 . - . ID=gene-AB11_RS25260;Name=AB11_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25260;old_locus_tag=AB11_3273 NZ_JHDH01000140.1 GeneMarkS-2+ CDS 222110 222250 . - 0 ID=cds-WP_001178593.1;Parent=gene-AB11_RS25260;Dbxref=GenBank:WP_001178593.1;Name=WP_001178593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25260;product=hypothetical protein;protein_id=WP_001178593.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 222273 222599 . - . ID=gene-AB11_RS17480;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AB11_RS17480;old_locus_tag=AB11_3274 NZ_JHDH01000140.1 Protein Homology CDS 222273 222599 . - 0 ID=cds-WP_001107564.1;Parent=gene-AB11_RS17480;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AB11_RS17480;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 222599 223318 . - . ID=gene-AB11_RS17485;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AB11_RS17485;old_locus_tag=AB11_3275 NZ_JHDH01000140.1 Protein Homology CDS 222599 223318 . - 0 ID=cds-WP_000786911.1;Parent=gene-AB11_RS17485;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AB11_RS17485;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 223479 224531 . + . ID=gene-AB11_RS17490;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AB11_RS17490;old_locus_tag=AB11_3276 NZ_JHDH01000140.1 Protein Homology CDS 223479 224531 . + 0 ID=cds-WP_001395412.1;Parent=gene-AB11_RS17490;Dbxref=GenBank:WP_001395412.1;Name=WP_001395412.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AB11_RS17490;product=A/G-specific adenine glycosylase;protein_id=WP_001395412.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 224559 224834 . + . ID=gene-AB11_RS17495;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AB11_RS17495;old_locus_tag=AB11_3277 NZ_JHDH01000140.1 Protein Homology CDS 224559 224834 . + 0 ID=cds-WP_000091700.1;Parent=gene-AB11_RS17495;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AB11_RS17495;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 224899 225978 . + . ID=gene-AB11_RS17500;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AB11_RS17500;old_locus_tag=AB11_3278 NZ_JHDH01000140.1 Protein Homology CDS 224899 225978 . + 0 ID=cds-WP_000760323.1;Parent=gene-AB11_RS17500;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AB11_RS17500;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 226180 227436 . + . ID=gene-AB11_RS17505;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AB11_RS17505;old_locus_tag=AB11_3280 NZ_JHDH01000140.1 Protein Homology CDS 226180 227436 . + 0 ID=cds-WP_001299430.1;Parent=gene-AB11_RS17505;Dbxref=GenBank:WP_001299430.1;Name=WP_001299430.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AB11_RS17505;product=nucleoside permease NupG;protein_id=WP_001299430.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 227486 229621 . - . ID=gene-AB11_RS17510;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AB11_RS17510;old_locus_tag=AB11_3281 NZ_JHDH01000140.1 Protein Homology CDS 227486 229621 . - 0 ID=cds-WP_000839760.1;Parent=gene-AB11_RS17510;Dbxref=GenBank:WP_000839760.1;Name=WP_000839760.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AB11_RS17510;product=ornithine decarboxylase;protein_id=WP_000839760.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 229783 229866 . - . ID=gene-AB11_RS25350;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AB11_RS25350 NZ_JHDH01000140.1 Protein Homology CDS 229783 229866 . - 0 ID=cds-WP_211180506.1;Parent=gene-AB11_RS25350;Dbxref=GenBank:WP_211180506.1;Name=WP_211180506.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AB11_RS25350;product=protein YqgH;protein_id=WP_211180506.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 230019 230726 . + . ID=gene-AB11_RS17515;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AB11_RS17515;old_locus_tag=AB11_3282 NZ_JHDH01000140.1 Protein Homology CDS 230019 230726 . + 0 ID=cds-WP_000234514.1;Parent=gene-AB11_RS17515;Dbxref=GenBank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AB11_RS17515;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 230832 230907 . + . ID=gene-AB11_RS17520;Name=AB11_RS17520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS17520;old_locus_tag=AB11_3283 NZ_JHDH01000140.1 tRNAscan-SE tRNA 230832 230907 . + . ID=rna-AB11_RS17520;Parent=gene-AB11_RS17520;anticodon=(pos:230865..230867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS17520;product=tRNA-Phe NZ_JHDH01000140.1 tRNAscan-SE exon 230832 230907 . + . ID=exon-AB11_RS17520-1;Parent=rna-AB11_RS17520;anticodon=(pos:230865..230867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS17520;product=tRNA-Phe NZ_JHDH01000140.1 RefSeq gene 231105 232367 . + . ID=gene-AB11_RS17525;Name=AB11_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17525;old_locus_tag=AB11_3284 NZ_JHDH01000140.1 Protein Homology CDS 231105 232367 . + 0 ID=cds-WP_001218861.1;Parent=gene-AB11_RS17525;Dbxref=GenBank:WP_001218861.1;Name=WP_001218861.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AB11_RS17525;product=tyrosine-type recombinase/integrase;protein_id=WP_001218861.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 232464 232538 . - . ID=gene-AB11_RS26085;Name=AB11_RS26085;end_range=232538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26085;partial=true;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 232464 232538 . - 0 ID=cds-AB11_RS26085;Parent=gene-AB11_RS26085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=232538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AB11_RS26085;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 232553 233249 . - . ID=gene-AB11_RS17530;Name=AB11_RS17530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17530;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 232553 233249 . - 0 ID=cds-AB11_RS17530;Parent=gene-AB11_RS17530;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS17530;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 233392 234891 . - . ID=gene-AB11_RS17535;Name=AB11_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17535;old_locus_tag=AB11_3288 NZ_JHDH01000140.1 Protein Homology CDS 233392 234891 . - 0 ID=cds-WP_021570941.1;Parent=gene-AB11_RS17535;Dbxref=GenBank:WP_021570941.1;Name=WP_021570941.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245085.1;locus_tag=AB11_RS17535;product=basic amino acid/polyamine antiporter;protein_id=WP_021570941.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 234966 237335 . - . ID=gene-AB11_RS17540;Name=AB11_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17540;old_locus_tag=AB11_3289 NZ_JHDH01000140.1 Protein Homology CDS 234966 237335 . - 0 ID=cds-WP_021570940.1;Parent=gene-AB11_RS17540;Dbxref=GenBank:WP_021570940.1;Name=WP_021570940.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671167.1;locus_tag=AB11_RS17540;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_021570940.1;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 237440 238909 . - . ID=gene-AB11_RS17545;Name=AB11_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17545;old_locus_tag=AB11_3290 NZ_JHDH01000140.1 Protein Homology CDS 237440 238909 . - 0 ID=cds-WP_001331566.1;Parent=gene-AB11_RS17545;Dbxref=GenBank:WP_001331566.1;Name=WP_001331566.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616049.1;locus_tag=AB11_RS17545;product=basic amino acid/polyamine antiporter;protein_id=WP_001331566.1;transl_table=11 NZ_JHDH01000140.1 RefSeq pseudogene 239161 239223 . + . ID=gene-AB11_RS17550;Name=AB11_RS17550;end_range=239223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17550;partial=true;pseudo=true NZ_JHDH01000140.1 Protein Homology CDS 239161 239223 . + 0 ID=cds-AB11_RS17550;Parent=gene-AB11_RS17550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;end_range=239223,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AB11_RS17550;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDH01000140.1 RefSeq gene 239289 239543 . + . ID=gene-AB11_RS17555;Name=AB11_RS17555;end_range=239543,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17555;old_locus_tag=AB11_3291;partial=true NZ_JHDH01000140.1 Protein Homology CDS 239289 239543 . + 0 ID=cds-WP_032223807.1;Parent=gene-AB11_RS17555;Dbxref=GenBank:WP_032223807.1;Name=WP_032223807.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=239543,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS17555;partial=true;product=transposase;protein_id=WP_032223807.1;transl_table=11 ##sequence-region NZ_JHDH01000141.1 1 78424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000141.1 RefSeq region 1 78424 . + . ID=NZ_JHDH01000141.1:1..78424;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000141.1 RefSeq pseudogene 1 955 . - . ID=gene-AB11_RS17560;Name=AB11_RS17560;end_range=955,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17560;old_locus_tag=AB11_3292;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000141.1 Protein Homology CDS 1 955 . - 0 ID=cds-AB11_RS17560;Parent=gene-AB11_RS17560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=955,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB11_RS17560;partial=true;product=IS66-like element ISEc8 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000141.1 RefSeq pseudogene 954 1706 . + . ID=gene-AB11_RS17565;Name=AB11_RS17565;end_range=1706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17565;old_locus_tag=AB11_3293;partial=true;pseudo=true;start_range=.,954 NZ_JHDH01000141.1 Protein Homology CDS 954 1706 . + 0 ID=cds-AB11_RS17565;Parent=gene-AB11_RS17565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AB11_RS17565;partial=true;product=AIDA repeat-containing protein;pseudo=true;start_range=.,954;transl_table=11 NZ_JHDH01000141.1 RefSeq pseudogene 1691 2878 . - . ID=gene-AB11_RS17570;Name=AB11_RS17570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17570;partial=true;pseudo=true;start_range=.,1691 NZ_JHDH01000141.1 Protein Homology CDS 1691 2878 . - 0 ID=cds-AB11_RS17570;Parent=gene-AB11_RS17570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=AB11_RS17570;partial=true;product=Accessory colonization factor AcfD;pseudo=true;start_range=.,1691;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 3363 5045 . - . ID=gene-AB11_RS17575;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AB11_RS17575;old_locus_tag=AB11_3295 NZ_JHDH01000141.1 Protein Homology CDS 3363 5045 . - 0 ID=cds-WP_000259302.1;Parent=gene-AB11_RS17575;Dbxref=GenBank:WP_000259302.1;Name=WP_000259302.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AB11_RS17575;product=glycolate permease GlcA;protein_id=WP_000259302.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 5400 7571 . - . ID=gene-AB11_RS17580;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AB11_RS17580;old_locus_tag=AB11_3296 NZ_JHDH01000141.1 Protein Homology CDS 5400 7571 . - 0 ID=cds-WP_000084131.1;Parent=gene-AB11_RS17580;Dbxref=GenBank:WP_000084131.1;Name=WP_000084131.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AB11_RS17580;product=malate synthase G;protein_id=WP_000084131.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 7593 7997 . - . ID=gene-AB11_RS17585;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AB11_RS17585;old_locus_tag=AB11_3297 NZ_JHDH01000141.1 Protein Homology CDS 7593 7997 . - 0 ID=cds-WP_000853256.1;Parent=gene-AB11_RS17585;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AB11_RS17585;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 8002 9225 . - . ID=gene-AB11_RS17590;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AB11_RS17590;old_locus_tag=AB11_3298 NZ_JHDH01000141.1 Protein Homology CDS 8002 9225 . - 0 ID=cds-WP_001194661.1;Parent=gene-AB11_RS17590;Dbxref=GenBank:WP_001194661.1;Name=WP_001194661.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AB11_RS17590;product=glycolate oxidase subunit GlcF;protein_id=WP_001194661.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 9236 10288 . - . ID=gene-AB11_RS17595;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AB11_RS17595;old_locus_tag=AB11_3299 NZ_JHDH01000141.1 Protein Homology CDS 9236 10288 . - 0 ID=cds-WP_000943059.1;Parent=gene-AB11_RS17595;Dbxref=GenBank:WP_000943059.1;Name=WP_000943059.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026191.1;locus_tag=AB11_RS17595;product=glycolate oxidase subunit GlcE;protein_id=WP_000943059.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 10288 11787 . - . ID=gene-AB11_RS17600;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AB11_RS17600;old_locus_tag=AB11_3300 NZ_JHDH01000141.1 Protein Homology CDS 10288 11787 . - 0 ID=cds-WP_000026117.1;Parent=gene-AB11_RS17600;Dbxref=GenBank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AB11_RS17600;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 12038 12802 . + . ID=gene-AB11_RS17605;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AB11_RS17605;old_locus_tag=AB11_3301 NZ_JHDH01000141.1 Protein Homology CDS 12038 12802 . + 0 ID=cds-WP_001297764.1;Parent=gene-AB11_RS17605;Dbxref=GenBank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AB11_RS17605;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 12809 13951 . - . ID=gene-AB11_RS17610;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AB11_RS17610;old_locus_tag=AB11_3302 NZ_JHDH01000141.1 Protein Homology CDS 12809 13951 . - 0 ID=cds-WP_001300526.1;Parent=gene-AB11_RS17610;Dbxref=GenBank:WP_001300526.1;Name=WP_001300526.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=AB11_RS17610;product=protein YghO;protein_id=WP_001300526.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 14361 16049 . + . ID=gene-AB11_RS17615;Name=AB11_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17615;old_locus_tag=AB11_3303 NZ_JHDH01000141.1 Protein Homology CDS 14361 16049 . + 0 ID=cds-WP_001326490.1;Parent=gene-AB11_RS17615;Dbxref=GenBank:WP_001326490.1;Name=WP_001326490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383581.1;locus_tag=AB11_RS17615;product=fatty acyl-AMP ligase;protein_id=WP_001326490.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 16046 16960 . + . ID=gene-AB11_RS17620;Name=AB11_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17620;old_locus_tag=AB11_3304 NZ_JHDH01000141.1 Protein Homology CDS 16046 16960 . + 0 ID=cds-WP_001077167.1;Parent=gene-AB11_RS17620;Dbxref=GenBank:WP_001077167.1;Name=WP_001077167.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AB11_RS17620;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001077167.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 16992 17240 . + . ID=gene-AB11_RS17625;Name=AB11_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17625;old_locus_tag=AB11_3305 NZ_JHDH01000141.1 Protein Homology CDS 16992 17240 . + 0 ID=cds-WP_000248097.1;Parent=gene-AB11_RS17625;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AB11_RS17625;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 17240 18412 . + . ID=gene-AB11_RS17630;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=AB11_RS17630;old_locus_tag=AB11_3306 NZ_JHDH01000141.1 Protein Homology CDS 17240 18412 . + 0 ID=cds-WP_032223819.1;Parent=gene-AB11_RS17630;Dbxref=GenBank:WP_032223819.1;Name=WP_032223819.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AB11_RS17630;product=serine palmitoyltransferase;protein_id=WP_032223819.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 18447 19526 . - . ID=gene-AB11_RS17635;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB11_RS17635;old_locus_tag=AB11_3307 NZ_JHDH01000141.1 Protein Homology CDS 18447 19526 . - 0 ID=cds-WP_001318997.1;Parent=gene-AB11_RS17635;Dbxref=GenBank:WP_001318997.1;Name=WP_001318997.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AB11_RS17635;product=LPS export ABC transporter permease LptG;protein_id=WP_001318997.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 19523 20593 . - . ID=gene-AB11_RS17640;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB11_RS17640;old_locus_tag=AB11_3308 NZ_JHDH01000141.1 Protein Homology CDS 19523 20593 . - 0 ID=cds-WP_000779636.1;Parent=gene-AB11_RS17640;Dbxref=GenBank:WP_000779636.1;Name=WP_000779636.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AB11_RS17640;product=LPS export ABC transporter permease LptF;protein_id=WP_000779636.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 20624 21184 . - . ID=gene-AB11_RS17645;Name=AB11_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17645;old_locus_tag=AB11_3309 NZ_JHDH01000141.1 Protein Homology CDS 20624 21184 . - 0 ID=cds-WP_001298770.1;Parent=gene-AB11_RS17645;Dbxref=GenBank:WP_001298770.1;Name=WP_001298770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AB11_RS17645;product=YtfJ family protein;protein_id=WP_001298770.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 21196 22020 . - . ID=gene-AB11_RS17650;Name=AB11_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17650;old_locus_tag=AB11_3310 NZ_JHDH01000141.1 Protein Homology CDS 21196 22020 . - 0 ID=cds-WP_000984978.1;Parent=gene-AB11_RS17650;Dbxref=GenBank:WP_000984978.1;Name=WP_000984978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AB11_RS17650;product=hypothetical protein;protein_id=WP_000984978.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 22020 23369 . - . ID=gene-AB11_RS17655;Name=AB11_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17655;old_locus_tag=AB11_3311 NZ_JHDH01000141.1 Protein Homology CDS 22020 23369 . - 0 ID=cds-WP_000896885.1;Parent=gene-AB11_RS17655;Dbxref=GenBank:WP_000896885.1;Name=WP_000896885.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AB11_RS17655;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000896885.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 23415 24173 . - . ID=gene-AB11_RS17660;Name=AB11_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17660;old_locus_tag=AB11_3312 NZ_JHDH01000141.1 Protein Homology CDS 23415 24173 . - 0 ID=cds-WP_000339531.1;Parent=gene-AB11_RS17660;Dbxref=GenBank:WP_000339531.1;Name=WP_000339531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AB11_RS17660;product=ATP-binding protein;protein_id=WP_000339531.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 24205 24918 . - . ID=gene-AB11_RS17665;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=AB11_RS17665;old_locus_tag=AB11_3313 NZ_JHDH01000141.1 Protein Homology CDS 24205 24918 . - 0 ID=cds-WP_001076243.1;Parent=gene-AB11_RS17665;Dbxref=GenBank:WP_001076243.1;Name=WP_001076243.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AB11_RS17665;product=dTMP kinase;protein_id=WP_001076243.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 25092 25784 . + . ID=gene-AB11_RS17670;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=AB11_RS17670;old_locus_tag=AB11_3314 NZ_JHDH01000141.1 Protein Homology CDS 25092 25784 . + 0 ID=cds-WP_001384144.1;Parent=gene-AB11_RS17670;Dbxref=GenBank:WP_001384144.1;Name=WP_001384144.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghT;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AB11_RS17670;product=dTMP kinase;protein_id=WP_001384144.1;transl_table=11 NZ_JHDH01000141.1 RefSeq pseudogene 25833 26892 . - . ID=gene-AB11_RS17675;Name=AB11_RS17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17675;pseudo=true NZ_JHDH01000141.1 Protein Homology CDS 25833 26892 . - 0 ID=cds-AB11_RS17675;Parent=gene-AB11_RS17675;Note=frameshifted;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AB11_RS17675;product=inorganic phosphate transporter;pseudo=true;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 27184 29043 . - . ID=gene-AB11_RS17680;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AB11_RS17680;old_locus_tag=AB11_3317 NZ_JHDH01000141.1 Protein Homology CDS 27184 29043 . - 0 ID=cds-WP_001297309.1;Parent=gene-AB11_RS17680;Dbxref=GenBank:WP_001297309.1;Name=WP_001297309.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AB11_RS17680;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001297309.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 29248 30114 . + . ID=gene-AB11_RS17685;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AB11_RS17685;old_locus_tag=AB11_3318 NZ_JHDH01000141.1 Protein Homology CDS 29248 30114 . + 0 ID=cds-WP_001295515.1;Parent=gene-AB11_RS17685;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AB11_RS17685;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 30237 30485 . - . ID=gene-AB11_RS17690;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AB11_RS17690;old_locus_tag=AB11_3319 NZ_JHDH01000141.1 Protein Homology CDS 30237 30485 . - 0 ID=cds-WP_000334896.1;Parent=gene-AB11_RS17690;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AB11_RS17690;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 30498 30839 . - . ID=gene-AB11_RS17695;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB11_RS17695;old_locus_tag=AB11_3320 NZ_JHDH01000141.1 Protein Homology CDS 30498 30839 . - 0 ID=cds-WP_001484893.1;Parent=gene-AB11_RS17695;Dbxref=GenBank:WP_001484893.1;Name=WP_001484893.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AB11_RS17695;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001484893.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 30832 31320 . - . ID=gene-AB11_RS17700;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AB11_RS17700;old_locus_tag=AB11_3321 NZ_JHDH01000141.1 Protein Homology CDS 30832 31320 . - 0 ID=cds-WP_000134014.1;Parent=gene-AB11_RS17700;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AB11_RS17700;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 31313 31807 . - . ID=gene-AB11_RS17705;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AB11_RS17705;old_locus_tag=AB11_3322 NZ_JHDH01000141.1 Protein Homology CDS 31313 31807 . - 0 ID=cds-WP_001221939.1;Parent=gene-AB11_RS17705;Dbxref=GenBank:WP_001221939.1;Name=WP_001221939.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417467.1;locus_tag=AB11_RS17705;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221939.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 31807 33510 . - . ID=gene-AB11_RS17710;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AB11_RS17710;old_locus_tag=AB11_3323 NZ_JHDH01000141.1 Protein Homology CDS 31807 33510 . - 0 ID=cds-WP_000083065.1;Parent=gene-AB11_RS17710;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AB11_RS17710;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 33507 34685 . - . ID=gene-AB11_RS17715;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AB11_RS17715;old_locus_tag=AB11_3324 NZ_JHDH01000141.1 Protein Homology CDS 33507 34685 . - 0 ID=cds-WP_000017703.1;Parent=gene-AB11_RS17715;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AB11_RS17715;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 34675 35661 . - . ID=gene-AB11_RS17720;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AB11_RS17720;old_locus_tag=AB11_3325 NZ_JHDH01000141.1 Protein Homology CDS 34675 35661 . - 0 ID=cds-WP_001081870.1;Parent=gene-AB11_RS17720;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AB11_RS17720;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 35664 36782 . - . ID=gene-AB11_RS17725;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AB11_RS17725;old_locus_tag=AB11_3326 NZ_JHDH01000141.1 Protein Homology CDS 35664 36782 . - 0 ID=cds-WP_000145410.1;Parent=gene-AB11_RS17725;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AB11_RS17725;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 36971 37258 . - . ID=gene-AB11_RS17730;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AB11_RS17730;old_locus_tag=AB11_3327 NZ_JHDH01000141.1 Protein Homology CDS 36971 37258 . - 0 ID=cds-WP_001059136.1;Parent=gene-AB11_RS17730;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AB11_RS17730;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JHDH01000141.1 RefSeq pseudogene 37377 38262 . - . ID=gene-AB11_RS17735;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=pseudogene;locus_tag=AB11_RS17735;old_locus_tag=AB11_3328;pseudo=true NZ_JHDH01000141.1 Protein Homology CDS 37377 38262 . - 0 ID=cds-AB11_RS17735;Parent=gene-AB11_RS17735;Note=frameshifted;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AB11_RS17735;product=YghX family hydrolase;pseudo=true;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 38419 39459 . + . ID=gene-AB11_RS17740;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AB11_RS17740;old_locus_tag=AB11_3330 NZ_JHDH01000141.1 Protein Homology CDS 38419 39459 . + 0 ID=cds-WP_000262172.1;Parent=gene-AB11_RS17740;Dbxref=GenBank:WP_000262172.1;Name=WP_000262172.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417474.1;locus_tag=AB11_RS17740;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262172.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 39499 39993 . - . ID=gene-AB11_RS17745;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AB11_RS17745;old_locus_tag=AB11_3331 NZ_JHDH01000141.1 Protein Homology CDS 39499 39993 . - 0 ID=cds-WP_000439331.1;Parent=gene-AB11_RS17745;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AB11_RS17745;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 40184 41068 . + . ID=gene-AB11_RS17750;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AB11_RS17750;old_locus_tag=AB11_3332 NZ_JHDH01000141.1 Protein Homology CDS 40184 41068 . + 0 ID=cds-WP_000018760.1;Parent=gene-AB11_RS17750;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AB11_RS17750;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 41340 41765 . - . ID=gene-AB11_RS17755;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AB11_RS17755;old_locus_tag=AB11_3333 NZ_JHDH01000141.1 Protein Homology CDS 41340 41765 . - 0 ID=cds-WP_001240712.1;Parent=gene-AB11_RS17755;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AB11_RS17755;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 41772 42506 . - . ID=gene-AB11_RS17760;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AB11_RS17760;old_locus_tag=AB11_3334 NZ_JHDH01000141.1 Protein Homology CDS 41772 42506 . - 0 ID=cds-WP_000527844.1;Parent=gene-AB11_RS17760;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AB11_RS17760;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 42758 43945 . + . ID=gene-AB11_RS17765;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AB11_RS17765;old_locus_tag=AB11_3335 NZ_JHDH01000141.1 Protein Homology CDS 42758 43945 . + 0 ID=cds-WP_000763931.1;Parent=gene-AB11_RS17765;Dbxref=GenBank:WP_000763931.1;Name=WP_000763931.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417481.1;locus_tag=AB11_RS17765;product=cystathionine beta-lyase;protein_id=WP_000763931.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 44085 44744 . + . ID=gene-AB11_RS17770;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AB11_RS17770;old_locus_tag=AB11_3336 NZ_JHDH01000141.1 Protein Homology CDS 44085 44744 . + 0 ID=cds-WP_000268419.1;Parent=gene-AB11_RS17770;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AB11_RS17770;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 44784 45683 . - . ID=gene-AB11_RS17775;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AB11_RS17775;old_locus_tag=AB11_3337 NZ_JHDH01000141.1 Protein Homology CDS 44784 45683 . - 0 ID=cds-WP_032223823.1;Parent=gene-AB11_RS17775;Dbxref=GenBank:WP_032223823.1;Name=WP_032223823.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AB11_RS17775;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_032223823.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 45877 47040 . + . ID=gene-AB11_RS17780;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AB11_RS17780;old_locus_tag=AB11_3339 NZ_JHDH01000141.1 Protein Homology CDS 45877 47040 . + 0 ID=cds-WP_001058802.1;Parent=gene-AB11_RS17780;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AB11_RS17780;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 47145 47972 . + . ID=gene-AB11_RS17785;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AB11_RS17785;old_locus_tag=AB11_3340 NZ_JHDH01000141.1 Protein Homology CDS 47145 47972 . + 0 ID=cds-WP_000013149.1;Parent=gene-AB11_RS17785;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AB11_RS17785;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 48172 49098 . + . ID=gene-AB11_RS17790;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AB11_RS17790;old_locus_tag=AB11_3341 NZ_JHDH01000141.1 Protein Homology CDS 48172 49098 . + 0 ID=cds-WP_000691619.1;Parent=gene-AB11_RS17790;Dbxref=GenBank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AB11_RS17790;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 49149 49406 . + . ID=gene-AB11_RS17795;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AB11_RS17795;old_locus_tag=AB11_3342 NZ_JHDH01000141.1 Protein Homology CDS 49149 49406 . + 0 ID=cds-WP_000848528.1;Parent=gene-AB11_RS17795;Dbxref=GenBank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AB11_RS17795;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 49449 51668 . - . ID=gene-AB11_RS17800;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AB11_RS17800;old_locus_tag=AB11_3343 NZ_JHDH01000141.1 Protein Homology CDS 49449 51668 . - 0 ID=cds-WP_032223825.1;Parent=gene-AB11_RS17800;Dbxref=GenBank:WP_032223825.1;Name=WP_032223825.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AB11_RS17800;product=YgiQ family radical SAM protein;protein_id=WP_032223825.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 51779 53191 . - . ID=gene-AB11_RS17805;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AB11_RS17805;old_locus_tag=AB11_3344 NZ_JHDH01000141.1 Protein Homology CDS 51779 53191 . - 0 ID=cds-WP_000059388.1;Parent=gene-AB11_RS17805;Dbxref=GenBank:WP_000059388.1;Name=WP_000059388.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AB11_RS17805;product=cell division protein FtsP;protein_id=WP_000059388.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 53266 54003 . - . ID=gene-AB11_RS17810;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AB11_RS17810;old_locus_tag=AB11_3345 NZ_JHDH01000141.1 Protein Homology CDS 53266 54003 . - 0 ID=cds-WP_000965722.1;Parent=gene-AB11_RS17810;Dbxref=GenBank:WP_000965722.1;Name=WP_000965722.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417490.1;locus_tag=AB11_RS17810;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 54237 56495 . - . ID=gene-AB11_RS17815;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AB11_RS17815;old_locus_tag=AB11_3346 NZ_JHDH01000141.1 Protein Homology CDS 54237 56495 . - 0 ID=cds-WP_032223828.1;Parent=gene-AB11_RS17815;Dbxref=GenBank:WP_032223828.1;Name=WP_032223828.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AB11_RS17815;product=DNA topoisomerase IV subunit A;protein_id=WP_032223828.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 56633 58240 . - . ID=gene-AB11_RS17820;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;locus_tag=AB11_RS17820;old_locus_tag=AB11_3347 NZ_JHDH01000141.1 Protein Homology CDS 56633 58240 . - 0 ID=cds-WP_001295629.1;Parent=gene-AB11_RS17820;Dbxref=GenBank:WP_001295629.1;Name=WP_001295629.1;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AB11_RS17820;product=ABC transporter substrate-binding protein;protein_id=WP_001295629.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 58373 58768 . - . ID=gene-AB11_RS17825;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AB11_RS17825;old_locus_tag=AB11_3348 NZ_JHDH01000141.1 Protein Homology CDS 58373 58768 . - 0 ID=cds-WP_000650107.1;Parent=gene-AB11_RS17825;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AB11_RS17825;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 58770 59066 . - . ID=gene-AB11_RS17830;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AB11_RS17830 NZ_JHDH01000141.1 Protein Homology CDS 58770 59066 . - 0 ID=cds-WP_000415584.1;Parent=gene-AB11_RS17830;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AB11_RS17830;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 59271 59753 . - . ID=gene-AB11_RS17835;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AB11_RS17835;old_locus_tag=AB11_3349 NZ_JHDH01000141.1 Protein Homology CDS 59271 59753 . - 0 ID=cds-WP_000183505.1;Parent=gene-AB11_RS17835;Dbxref=GenBank:WP_000183505.1;Name=WP_000183505.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026197.1;locus_tag=AB11_RS17835;product=AraC family transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 59806 60198 . - . ID=gene-AB11_RS17840;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AB11_RS17840;old_locus_tag=AB11_3350 NZ_JHDH01000141.1 Protein Homology CDS 59806 60198 . - 0 ID=cds-WP_000712658.1;Parent=gene-AB11_RS17840;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AB11_RS17840;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 60350 61009 . + . ID=gene-AB11_RS17845;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AB11_RS17845;old_locus_tag=AB11_3351 NZ_JHDH01000141.1 Protein Homology CDS 60350 61009 . + 0 ID=cds-WP_001221493.1;Parent=gene-AB11_RS17845;Dbxref=GenBank:WP_001221493.1;Name=WP_001221493.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AB11_RS17845;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221493.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 61006 62355 . + . ID=gene-AB11_RS17850;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AB11_RS17850;old_locus_tag=AB11_3352 NZ_JHDH01000141.1 Protein Homology CDS 61006 62355 . + 0 ID=cds-WP_000673402.1;Parent=gene-AB11_RS17850;Dbxref=GenBank:WP_000673402.1;Name=WP_000673402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AB11_RS17850;product=quorum sensing histidine kinase QseC;protein_id=WP_000673402.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 62401 62733 . - . ID=gene-AB11_RS17855;Name=ygiZ;gbkey=Gene;gene=ygiZ;gene_biotype=protein_coding;locus_tag=AB11_RS17855 NZ_JHDH01000141.1 Protein Homology CDS 62401 62733 . - 0 ID=cds-WP_000917684.1;Parent=gene-AB11_RS17855;Dbxref=GenBank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;gene=ygiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AB11_RS17855;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 63052 63633 . + . ID=gene-AB11_RS17860;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AB11_RS17860;old_locus_tag=AB11_3353 NZ_JHDH01000141.1 Protein Homology CDS 63052 63633 . + 0 ID=cds-WP_000065430.1;Parent=gene-AB11_RS17860;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AB11_RS17860;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 63664 63978 . + . ID=gene-AB11_RS17865;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AB11_RS17865;old_locus_tag=AB11_3354 NZ_JHDH01000141.1 Protein Homology CDS 63664 63978 . + 0 ID=cds-WP_000958598.1;Parent=gene-AB11_RS17865;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AB11_RS17865;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 64026 65918 . - . ID=gene-AB11_RS17870;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AB11_RS17870;old_locus_tag=AB11_3355 NZ_JHDH01000141.1 Protein Homology CDS 64026 65918 . - 0 ID=cds-WP_000195296.1;Parent=gene-AB11_RS17870;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AB11_RS17870;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 65947 66528 . - . ID=gene-AB11_RS17875;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AB11_RS17875;old_locus_tag=AB11_3356 NZ_JHDH01000141.1 Protein Homology CDS 65947 66528 . - 0 ID=cds-WP_000105733.1;Parent=gene-AB11_RS17875;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AB11_RS17875;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 66528 67355 . - . ID=gene-AB11_RS17880;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AB11_RS17880;old_locus_tag=AB11_3357 NZ_JHDH01000141.1 Protein Homology CDS 66528 67355 . - 0 ID=cds-WP_000444747.1;Parent=gene-AB11_RS17880;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AB11_RS17880;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 67380 67802 . - . ID=gene-AB11_RS17885;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AB11_RS17885;old_locus_tag=AB11_3358 NZ_JHDH01000141.1 Protein Homology CDS 67380 67802 . - 0 ID=cds-WP_000833393.1;Parent=gene-AB11_RS17885;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AB11_RS17885;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 67803 68432 . - . ID=gene-AB11_RS17890;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AB11_RS17890;old_locus_tag=AB11_3359 NZ_JHDH01000141.1 Protein Homology CDS 67803 68432 . - 0 ID=cds-WP_000917117.1;Parent=gene-AB11_RS17890;Dbxref=GenBank:WP_000917117.1;Name=WP_000917117.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AB11_RS17890;product=ADP-ribose diphosphatase;protein_id=WP_000917117.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 68637 70118 . + . ID=gene-AB11_RS17895;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AB11_RS17895;old_locus_tag=AB11_3360 NZ_JHDH01000141.1 Protein Homology CDS 68637 70118 . + 0 ID=cds-WP_000735278.1;Parent=gene-AB11_RS17895;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AB11_RS17895;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 70266 70937 . + . ID=gene-AB11_RS17900;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AB11_RS17900;old_locus_tag=AB11_3361 NZ_JHDH01000141.1 Protein Homology CDS 70266 70937 . + 0 ID=cds-WP_000831543.1;Parent=gene-AB11_RS17900;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AB11_RS17900;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 70943 72103 . + . ID=gene-AB11_RS17905;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AB11_RS17905;old_locus_tag=AB11_3362 NZ_JHDH01000141.1 Protein Homology CDS 70943 72103 . + 0 ID=cds-WP_000442860.1;Parent=gene-AB11_RS17905;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AB11_RS17905;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 72141 72929 . - . ID=gene-AB11_RS17910;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AB11_RS17910;old_locus_tag=AB11_3363 NZ_JHDH01000141.1 Protein Homology CDS 72141 72929 . - 0 ID=cds-WP_001320780.1;Parent=gene-AB11_RS17910;Dbxref=GenBank:WP_001320780.1;Name=WP_001320780.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AB11_RS17910;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001320780.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 73072 73845 . + . ID=gene-AB11_RS17915;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AB11_RS17915;old_locus_tag=AB11_3364 NZ_JHDH01000141.1 Protein Homology CDS 73072 73845 . + 0 ID=cds-WP_001295627.1;Parent=gene-AB11_RS17915;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AB11_RS17915;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 73903 74073 . - . ID=gene-AB11_RS17920;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AB11_RS17920;old_locus_tag=AB11_3365 NZ_JHDH01000141.1 Protein Homology CDS 73903 74073 . - 0 ID=cds-WP_000469266.1;Parent=gene-AB11_RS17920;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AB11_RS17920;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 74335 74988 . - . ID=gene-AB11_RS17925;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AB11_RS17925;old_locus_tag=AB11_3366 NZ_JHDH01000141.1 Protein Homology CDS 74335 74988 . - 0 ID=cds-WP_001076997.1;Parent=gene-AB11_RS17925;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AB11_RS17925;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JHDH01000141.1 cmsearch riboswitch 75092 75240 . - . ID=id-NZ_JHDH01000141.1:75092..75240;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000141.1 RefSeq gene 75362 75652 . + . ID=gene-AB11_RS17930;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AB11_RS17930;old_locus_tag=AB11_3367 NZ_JHDH01000141.1 Protein Homology CDS 75362 75652 . + 0 ID=cds-WP_001295626.1;Parent=gene-AB11_RS17930;Dbxref=GenBank:WP_001295626.1;Name=WP_001295626.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AB11_RS17930;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001295626.1;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 75936 76487 . + . ID=gene-AB11_RS17935;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=AB11_RS17935;old_locus_tag=AB11_3368 NZ_JHDH01000141.1 Protein Homology CDS 75936 76487 . + 0 ID=cds-WP_001272145.1;Parent=gene-AB11_RS17935;Dbxref=GenBank:WP_001272145.1;Name=WP_001272145.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AB11_RS17935;product=fimbrial-like protein;protein_id=WP_001272145.1;transl_table=11 NZ_JHDH01000141.1 RefSeq pseudogene 76547 78037 . + . ID=gene-AB11_RS17940;Name=AB11_RS17940;end_range=78037,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17940;old_locus_tag=AB11_3369;partial=true;pseudo=true NZ_JHDH01000141.1 Protein Homology CDS 76547 78037 . + 0 ID=cds-AB11_RS17940;Parent=gene-AB11_RS17940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=78037,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AB11_RS17940;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JHDH01000141.1 RefSeq gene 78128 78424 . + . ID=gene-AB11_RS17945;Name=AB11_RS17945;end_range=78424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17945;old_locus_tag=AB11_3370;partial=true NZ_JHDH01000141.1 Protein Homology CDS 78128 78424 . + 0 ID=cds-WP_001484348.1;Parent=gene-AB11_RS17945;Dbxref=GenBank:WP_001484348.1;Name=WP_001484348.1;end_range=78424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS17945;partial=true;product=IS3 family transposase;protein_id=WP_001484348.1;transl_table=11 ##sequence-region NZ_JHDH01000142.1 1 6199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000142.1 RefSeq region 1 6199 . + . ID=NZ_JHDH01000142.1:1..6199;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000142.1 RefSeq gene 1 340 . + . ID=gene-AB11_RS17950;Name=AB11_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17950;old_locus_tag=AB11_3371;partial=true;start_range=.,1 NZ_JHDH01000142.1 Protein Homology CDS 1 340 . + 1 ID=cds-WP_000314416.1;Parent=gene-AB11_RS17950;Dbxref=GenBank:WP_000314416.1;Name=WP_000314416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS17950;partial=true;product=IS3 family transposase;protein_id=WP_000314416.1;start_range=.,1;transl_table=11 NZ_JHDH01000142.1 RefSeq pseudogene 352 1371 . + . ID=gene-AB11_RS17955;Name=AB11_RS17955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17955;old_locus_tag=AB11_3372;partial=true;pseudo=true;start_range=.,352 NZ_JHDH01000142.1 Protein Homology CDS 352 1371 . + 0 ID=cds-AB11_RS17955;Parent=gene-AB11_RS17955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AB11_RS17955;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,352;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 1387 2136 . + . ID=gene-AB11_RS17960;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AB11_RS17960;old_locus_tag=AB11_3373 NZ_JHDH01000142.1 Protein Homology CDS 1387 2136 . + 0 ID=cds-WP_001269824.1;Parent=gene-AB11_RS17960;Dbxref=GenBank:WP_001269824.1;Name=WP_001269824.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AB11_RS17960;product=fimbrial biogenesis chaperone;protein_id=WP_001269824.1;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 2138 3202 . + . ID=gene-AB11_RS17965;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=AB11_RS17965;old_locus_tag=AB11_3374 NZ_JHDH01000142.1 Protein Homology CDS 2138 3202 . + 0 ID=cds-WP_001269802.1;Parent=gene-AB11_RS17965;Dbxref=GenBank:WP_001269802.1;Name=WP_001269802.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AB11_RS17965;product=fimbrial protein;protein_id=WP_001269802.1;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 3245 3445 . - . ID=gene-AB11_RS17970;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AB11_RS17970;old_locus_tag=AB11_3375 NZ_JHDH01000142.1 Protein Homology CDS 3245 3445 . - 0 ID=cds-WP_000350095.1;Parent=gene-AB11_RS17970;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AB11_RS17970;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 3714 4343 . + . ID=gene-AB11_RS17975;Name=AB11_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17975;old_locus_tag=AB11_3376 NZ_JHDH01000142.1 Protein Homology CDS 3714 4343 . + 0 ID=cds-WP_000599926.1;Parent=gene-AB11_RS17975;Dbxref=GenBank:WP_000599926.1;Name=WP_000599926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AB11_RS17975;product=OB-fold-containig protein;protein_id=WP_000599926.1;transl_table=11 NZ_JHDH01000142.1 RefSeq pseudogene 4370 5086 . + . ID=gene-AB11_RS17980;Name=AB11_RS17980;end_range=5086,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17980;old_locus_tag=AB11_3377;partial=true;pseudo=true NZ_JHDH01000142.1 Protein Homology CDS 4370 5086 . + 0 ID=cds-AB11_RS17980;Parent=gene-AB11_RS17980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020,GO:0016600;end_range=5086,.;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311960.1;locus_tag=AB11_RS17980;partial=true;product=flotillin family protein;pseudo=true;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 5448 5507 . + . ID=gene-AB11_RS17985;Name=AB11_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS17985 NZ_JHDH01000142.1 Protein Homology CDS 5448 5507 . + 0 ID=cds-WP_001387081.1;Parent=gene-AB11_RS17985;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AB11_RS17985;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JHDH01000142.1 RefSeq gene 5823 5882 . + . ID=gene-AB11_RS17990;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AB11_RS17990 NZ_JHDH01000142.1 Protein Homology CDS 5823 5882 . + 0 ID=cds-WP_001387082.1;Parent=gene-AB11_RS17990;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AB11_RS17990;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JHDH01000142.1 RefSeq pseudogene 6002 6199 . - . ID=gene-AB11_RS17995;Name=AB11_RS17995;end_range=6199,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS17995;old_locus_tag=AB11_3379;partial=true;pseudo=true NZ_JHDH01000142.1 Protein Homology CDS 6002 6199 . - 0 ID=cds-AB11_RS17995;Parent=gene-AB11_RS17995;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311962.1;locus_tag=AB11_RS17995;partial=true;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000143.1 1 9374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000143.1 RefSeq region 1 9374 . + . ID=NZ_JHDH01000143.1:1..9374;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000143.1 RefSeq gene 1 244 . + . ID=gene-AB11_RS18000;Name=AB11_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18000;old_locus_tag=AB11_3380;partial=true;start_range=.,1 NZ_JHDH01000143.1 Protein Homology CDS 1 244 . + 1 ID=cds-WP_024435532.1;Parent=gene-AB11_RS18000;Dbxref=GenBank:WP_024435532.1;Name=WP_024435532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB11_RS18000;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_024435532.1;start_range=.,1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 278 1057 . - . ID=gene-AB11_RS18005;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AB11_RS18005;old_locus_tag=AB11_3381 NZ_JHDH01000143.1 Protein Homology CDS 278 1057 . - 0 ID=cds-WP_000259029.1;Parent=gene-AB11_RS18005;Dbxref=GenBank:WP_000259029.1;Name=WP_000259029.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019727244.1;locus_tag=AB11_RS18005;product=dihydropteroate synthase;protein_id=WP_000259029.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 1051 1398 . - . ID=gene-AB11_RS18010;Name=AB11_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18010 NZ_JHDH01000143.1 Protein Homology CDS 1051 1398 . - 0 ID=cds-WP_000679427.1;Parent=gene-AB11_RS18010;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=AB11_RS18010;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 1628 2101 . - . ID=gene-AB11_RS18015;Name=dfrA7;gbkey=Gene;gene=dfrA7;gene_biotype=protein_coding;locus_tag=AB11_RS18015 NZ_JHDH01000143.1 Protein Homology CDS 1628 2101 . - 0 ID=cds-WP_000703418.1;Parent=gene-AB11_RS18015;Dbxref=GenBank:WP_000703418.1;Name=WP_000703418.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA7;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389366.1;locus_tag=AB11_RS18015;product=trimethoprim-resistant dihydrofolate reductase DfrA7;protein_id=WP_000703418.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 2259 3272 . + . ID=gene-AB11_RS18020;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=AB11_RS18020;old_locus_tag=AB11_3382 NZ_JHDH01000143.1 Protein Homology CDS 2259 3272 . + 0 ID=cds-WP_000845048.1;Parent=gene-AB11_RS18020;Dbxref=GenBank:WP_000845048.1;Name=WP_000845048.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1;locus_tag=AB11_RS18020;product=class 1 integron integrase IntI1;protein_id=WP_000845048.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 3475 3825 . + . ID=gene-AB11_RS26090;Name=AB11_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26090 NZ_JHDH01000143.1 Protein Homology CDS 3475 3825 . + 0 ID=cds-WP_000454193.1;Parent=gene-AB11_RS26090;Dbxref=GenBank:WP_000454193.1;Name=WP_000454193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023237.6;locus_tag=AB11_RS26090;product=DUF3330 domain-containing protein;protein_id=WP_000454193.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 3951 4511 . + . ID=gene-AB11_RS18030;Name=AB11_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18030;old_locus_tag=AB11_3384 NZ_JHDH01000143.1 Protein Homology CDS 3951 4511 . + 0 ID=cds-WP_000147567.1;Parent=gene-AB11_RS18030;Dbxref=GenBank:WP_000147567.1;Name=WP_000147567.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AB11_RS18030;product=recombinase family protein;protein_id=WP_000147567.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 4514 7480 . + . ID=gene-AB11_RS18035;Name=AB11_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18035;old_locus_tag=AB11_3385 NZ_JHDH01000143.1 Protein Homology CDS 4514 7480 . + 0 ID=cds-WP_001138064.1;Parent=gene-AB11_RS18035;Dbxref=GenBank:WP_001138064.1;Name=WP_001138064.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=AB11_RS18035;product=Tn3-like element TnAs3 family transposase;protein_id=WP_001138064.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 7547 7924 . + . ID=gene-AB11_RS18040;Name=AB11_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18040;old_locus_tag=AB11_3386 NZ_JHDH01000143.1 Protein Homology CDS 7547 7924 . + 0 ID=cds-WP_000656305.1;Parent=gene-AB11_RS18040;Dbxref=GenBank:WP_000656305.1;Name=WP_000656305.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656306.1;locus_tag=AB11_RS18040;product=GNAT family N-acetyltransferase;protein_id=WP_000656305.1;transl_table=11 NZ_JHDH01000143.1 RefSeq gene 8125 8730 . - . ID=gene-AB11_RS18045;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=AB11_RS18045;old_locus_tag=AB11_3387 NZ_JHDH01000143.1 Protein Homology CDS 8125 8730 . - 0 ID=cds-WP_050436713.1;Parent=gene-AB11_RS18045;Dbxref=GenBank:WP_050436713.1;Name=WP_050436713.1;gbkey=CDS;gene=catA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152976.1;locus_tag=AB11_RS18045;product=type A chloramphenicol O-acetyltransferase;protein_id=WP_050436713.1;transl_table=11 NZ_JHDH01000143.1 RefSeq pseudogene 8780 9374 . + . ID=gene-AB11_RS18050;Name=AB11_RS18050;end_range=9374,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18050;old_locus_tag=AB11_3388;partial=true;pseudo=true NZ_JHDH01000143.1 Protein Homology CDS 8780 9374 . + 0 ID=cds-AB11_RS18050;Parent=gene-AB11_RS18050;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=9374,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS18050;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000144.1 1 75900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000144.1 RefSeq region 1 75900 . + . ID=NZ_JHDH01000144.1:1..75900;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000144.1 RefSeq gene 1 191 . + . ID=gene-AB11_RS18055;Name=AB11_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18055;old_locus_tag=AB11_3389;partial=true;start_range=.,1 NZ_JHDH01000144.1 Protein Homology CDS 1 191 . + 2 ID=cds-WP_113706276.1;Parent=gene-AB11_RS18055;Dbxref=GenBank:WP_113706276.1;Name=WP_113706276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AB11_RS18055;partial=true;product=OB-fold-containig protein;protein_id=WP_113706276.1;start_range=.,1;transl_table=11 NZ_JHDH01000144.1 RefSeq pseudogene 218 934 . + . ID=gene-AB11_RS18060;Name=AB11_RS18060;end_range=934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18060;old_locus_tag=AB11_3390;partial=true;pseudo=true NZ_JHDH01000144.1 Protein Homology CDS 218 934 . + 0 ID=cds-AB11_RS18060;Parent=gene-AB11_RS18060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020,GO:0016600;end_range=934,.;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311960.1;locus_tag=AB11_RS18060;partial=true;product=flotillin family protein;pseudo=true;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 1294 1353 . + . ID=gene-AB11_RS18065;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AB11_RS18065 NZ_JHDH01000144.1 Protein Homology CDS 1294 1353 . + 0 ID=cds-WP_001387082.1-2;Parent=gene-AB11_RS18065;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AB11_RS18065;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 1473 2906 . - . ID=gene-AB11_RS18070;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AB11_RS18070;old_locus_tag=AB11_3392 NZ_JHDH01000144.1 Protein Homology CDS 1473 2906 . - 0 ID=cds-WP_000869178.1;Parent=gene-AB11_RS18070;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AB11_RS18070;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 2954 5794 . - . ID=gene-AB11_RS18075;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AB11_RS18075;old_locus_tag=AB11_3393 NZ_JHDH01000144.1 Protein Homology CDS 2954 5794 . - 0 ID=cds-WP_001301081.1;Parent=gene-AB11_RS18075;Dbxref=GenBank:WP_001301081.1;Name=WP_001301081.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AB11_RS18075;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001301081.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 5817 7118 . - . ID=gene-AB11_RS18080;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AB11_RS18080;old_locus_tag=AB11_3394 NZ_JHDH01000144.1 Protein Homology CDS 5817 7118 . - 0 ID=cds-WP_032223848.1;Parent=gene-AB11_RS18080;Dbxref=GenBank:WP_032223848.1;Name=WP_032223848.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AB11_RS18080;product=inorganic triphosphatase;protein_id=WP_032223848.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 7360 7980 . + . ID=gene-AB11_RS18085;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AB11_RS18085;old_locus_tag=AB11_3395 NZ_JHDH01000144.1 Protein Homology CDS 7360 7980 . + 0 ID=cds-WP_001125331.1;Parent=gene-AB11_RS18085;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AB11_RS18085;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 8044 9282 . + . ID=gene-AB11_RS18090;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AB11_RS18090;old_locus_tag=AB11_3396 NZ_JHDH01000144.1 Protein Homology CDS 8044 9282 . + 0 ID=cds-WP_000708487.1;Parent=gene-AB11_RS18090;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AB11_RS18090;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 9463 10284 . - . ID=gene-AB11_RS18095;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AB11_RS18095;old_locus_tag=AB11_3397 NZ_JHDH01000144.1 Protein Homology CDS 9463 10284 . - 0 ID=cds-WP_001405697.1;Parent=gene-AB11_RS18095;Dbxref=GenBank:WP_001405697.1;Name=WP_001405697.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AB11_RS18095;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001405697.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 10375 10743 . - . ID=gene-AB11_RS18100;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AB11_RS18100;old_locus_tag=AB11_3398 NZ_JHDH01000144.1 Protein Homology CDS 10375 10743 . - 0 ID=cds-WP_001295541.1;Parent=gene-AB11_RS18100;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AB11_RS18100;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 10848 11465 . + . ID=gene-AB11_RS18105;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AB11_RS18105;old_locus_tag=AB11_3399 NZ_JHDH01000144.1 Protein Homology CDS 10848 11465 . + 0 ID=cds-WP_001272796.1;Parent=gene-AB11_RS18105;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AB11_RS18105;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 11478 12410 . - . ID=gene-AB11_RS18110;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AB11_RS18110;old_locus_tag=AB11_3400 NZ_JHDH01000144.1 Protein Homology CDS 11478 12410 . - 0 ID=cds-WP_000935209.1;Parent=gene-AB11_RS18110;Dbxref=GenBank:WP_000935209.1;Name=WP_000935209.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AB11_RS18110;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935209.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 12617 13528 . + . ID=gene-AB11_RS18115;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AB11_RS18115;old_locus_tag=AB11_3402 NZ_JHDH01000144.1 Protein Homology CDS 12617 13528 . + 0 ID=cds-WP_000986797.1;Parent=gene-AB11_RS18115;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AB11_RS18115;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 13525 14130 . + . ID=gene-AB11_RS18120;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AB11_RS18120;old_locus_tag=AB11_3403 NZ_JHDH01000144.1 Protein Homology CDS 13525 14130 . + 0 ID=cds-WP_000722957.1;Parent=gene-AB11_RS18120;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AB11_RS18120;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 14178 15641 . + . ID=gene-AB11_RS18125;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AB11_RS18125;old_locus_tag=AB11_3404 NZ_JHDH01000144.1 Protein Homology CDS 14178 15641 . + 0 ID=cds-WP_000804973.1;Parent=gene-AB11_RS18125;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AB11_RS18125;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 15684 16697 . - . ID=gene-AB11_RS18130;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AB11_RS18130;old_locus_tag=AB11_3405 NZ_JHDH01000144.1 Protein Homology CDS 15684 16697 . - 0 ID=cds-WP_001264352.1;Parent=gene-AB11_RS18130;Dbxref=GenBank:WP_001264352.1;Name=WP_001264352.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AB11_RS18130;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264352.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 16935 17150 . + . ID=gene-AB11_RS18135;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AB11_RS18135;old_locus_tag=AB11_3406 NZ_JHDH01000144.1 Protein Homology CDS 16935 17150 . + 0 ID=cds-WP_001144069.1;Parent=gene-AB11_RS18135;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AB11_RS18135;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 17261 19006 . + . ID=gene-AB11_RS18140;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AB11_RS18140;old_locus_tag=AB11_3407 NZ_JHDH01000144.1 Protein Homology CDS 17261 19006 . + 0 ID=cds-WP_000918827.1;Parent=gene-AB11_RS18140;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AB11_RS18140;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 19201 21042 . + . ID=gene-AB11_RS18145;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AB11_RS18145;old_locus_tag=AB11_3409 NZ_JHDH01000144.1 Protein Homology CDS 19201 21042 . + 0 ID=cds-WP_000437375.1;Parent=gene-AB11_RS18145;Dbxref=GenBank:WP_000437375.1;Name=WP_000437375.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AB11_RS18145;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 21121 21627 . - . ID=gene-AB11_RS18150;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AB11_RS18150;old_locus_tag=AB11_3410 NZ_JHDH01000144.1 Protein Homology CDS 21121 21627 . - 0 ID=cds-WP_000228937.1;Parent=gene-AB11_RS18150;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AB11_RS18150;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 21752 21827 . + . ID=gene-AB11_RS18155;Name=AB11_RS18155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS18155;old_locus_tag=AB11_3411 NZ_JHDH01000144.1 tRNAscan-SE tRNA 21752 21827 . + . ID=rna-AB11_RS18155;Parent=gene-AB11_RS18155;anticodon=(pos:21785..21787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18155;product=tRNA-Ile NZ_JHDH01000144.1 tRNAscan-SE exon 21752 21827 . + . ID=exon-AB11_RS18155-1;Parent=rna-AB11_RS18155;anticodon=(pos:21785..21787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18155;product=tRNA-Ile NZ_JHDH01000144.1 RefSeq gene 21881 22645 . - . ID=gene-AB11_RS18160;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AB11_RS18160;old_locus_tag=AB11_3412 NZ_JHDH01000144.1 Protein Homology CDS 21881 22645 . - 0 ID=cds-WP_001066494.1;Parent=gene-AB11_RS18160;Dbxref=GenBank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417541.1;locus_tag=AB11_RS18160;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001066494.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 22933 23556 . + . ID=gene-AB11_RS18165;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AB11_RS18165;old_locus_tag=AB11_3413 NZ_JHDH01000144.1 Protein Homology CDS 22933 23556 . + 0 ID=cds-WP_000018003.1;Parent=gene-AB11_RS18165;Dbxref=GenBank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AB11_RS18165;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 23710 25230 . - . ID=gene-AB11_RS18170;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AB11_RS18170;old_locus_tag=AB11_3414 NZ_JHDH01000144.1 Protein Homology CDS 23710 25230 . - 0 ID=cds-WP_000094721.1;Parent=gene-AB11_RS18170;Dbxref=GenBank:WP_000094721.1;Name=WP_000094721.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AB11_RS18170;product=aerotaxis sensor receptor Aer;protein_id=WP_000094721.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 25648 27027 . + . ID=gene-AB11_RS18175;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AB11_RS18175;old_locus_tag=AB11_3415 NZ_JHDH01000144.1 Protein Homology CDS 25648 27027 . + 0 ID=cds-WP_001301395.1;Parent=gene-AB11_RS18175;Dbxref=GenBank:WP_001301395.1;Name=WP_001301395.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AB11_RS18175;product=putrescine aminotransferase;protein_id=WP_001301395.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 27069 27401 . - . ID=gene-AB11_RS18180;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AB11_RS18180;old_locus_tag=AB11_3416 NZ_JHDH01000144.1 Protein Homology CDS 27069 27401 . - 0 ID=cds-WP_000450594.1;Parent=gene-AB11_RS18180;Dbxref=GenBank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=AB11_RS18180;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 27620 28603 . + . ID=gene-AB11_RS18185;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AB11_RS18185;old_locus_tag=AB11_3417 NZ_JHDH01000144.1 Protein Homology CDS 27620 28603 . + 0 ID=cds-WP_000212475.1;Parent=gene-AB11_RS18185;Dbxref=GenBank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AB11_RS18185;product=transcriptional regulator EbgR;protein_id=WP_000212475.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 28787 31879 . + . ID=gene-AB11_RS18190;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AB11_RS18190;old_locus_tag=AB11_3418 NZ_JHDH01000144.1 Protein Homology CDS 28787 31879 . + 0 ID=cds-WP_001082856.1;Parent=gene-AB11_RS18190;Dbxref=GenBank:WP_001082856.1;Name=WP_001082856.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=AB11_RS18190;product=beta-galactosidase subunit alpha;protein_id=WP_001082856.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 31876 32325 . + . ID=gene-AB11_RS18195;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AB11_RS18195;old_locus_tag=AB11_3419 NZ_JHDH01000144.1 Protein Homology CDS 31876 32325 . + 0 ID=cds-WP_001219954.1;Parent=gene-AB11_RS18195;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AB11_RS18195;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 32388 33821 . + . ID=gene-AB11_RS18200;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AB11_RS18200;old_locus_tag=AB11_3420 NZ_JHDH01000144.1 Protein Homology CDS 32388 33821 . + 0 ID=cds-WP_021570951.1;Parent=gene-AB11_RS18200;Dbxref=GenBank:WP_021570951.1;Name=WP_021570951.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026200.1;locus_tag=AB11_RS18200;product=amino acid permease;protein_id=WP_021570951.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 33955 35025 . + . ID=gene-AB11_RS18205;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AB11_RS18205;old_locus_tag=AB11_3421 NZ_JHDH01000144.1 Protein Homology CDS 33955 35025 . + 0 ID=cds-WP_000767652.1;Parent=gene-AB11_RS18205;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AB11_RS18205;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 35042 37393 . + . ID=gene-AB11_RS18210;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AB11_RS18210;old_locus_tag=AB11_3422 NZ_JHDH01000144.1 Protein Homology CDS 35042 37393 . + 0 ID=cds-WP_000695487.1;Parent=gene-AB11_RS18210;Dbxref=GenBank:WP_000695487.1;Name=WP_000695487.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AB11_RS18210;product=alpha-glucosidase;protein_id=WP_000695487.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 37819 39837 . + . ID=gene-AB11_RS18215;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AB11_RS18215;old_locus_tag=AB11_3425 NZ_JHDH01000144.1 Protein Homology CDS 37819 39837 . + 0 ID=cds-WP_000121433.1;Parent=gene-AB11_RS18215;Dbxref=GenBank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AB11_RS18215;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121433.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 39882 40298 . - . ID=gene-AB11_RS18220;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AB11_RS18220;old_locus_tag=AB11_3426 NZ_JHDH01000144.1 Protein Homology CDS 39882 40298 . - 0 ID=cds-WP_000560266.1;Parent=gene-AB11_RS18220;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AB11_RS18220;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 40295 40609 . - . ID=gene-AB11_RS18225;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AB11_RS18225;old_locus_tag=AB11_3427 NZ_JHDH01000144.1 Protein Homology CDS 40295 40609 . - 0 ID=cds-WP_000550189.1;Parent=gene-AB11_RS18225;Dbxref=GenBank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AB11_RS18225;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 40893 42029 . - . ID=gene-AB11_RS18230;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AB11_RS18230;old_locus_tag=AB11_3428 NZ_JHDH01000144.1 Protein Homology CDS 40893 42029 . - 0 ID=cds-WP_000018695.1;Parent=gene-AB11_RS18230;Dbxref=GenBank:WP_000018695.1;Name=WP_000018695.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AB11_RS18230;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018695.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 42114 42617 . + . ID=gene-AB11_RS18235;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AB11_RS18235;old_locus_tag=AB11_3429 NZ_JHDH01000144.1 Protein Homology CDS 42114 42617 . + 0 ID=cds-WP_001333820.1;Parent=gene-AB11_RS18235;Dbxref=GenBank:WP_001333820.1;Name=WP_001333820.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417556.2;locus_tag=AB11_RS18235;product=M48 metallopeptidase family protein;protein_id=WP_001333820.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 42694 43386 . + . ID=gene-AB11_RS18240;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AB11_RS18240;old_locus_tag=AB11_3430 NZ_JHDH01000144.1 Protein Homology CDS 42694 43386 . + 0 ID=cds-WP_000942548.1;Parent=gene-AB11_RS18240;Dbxref=GenBank:WP_000942548.1;Name=WP_000942548.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417557.1;locus_tag=AB11_RS18240;product=SanA/YdcF family protein;protein_id=WP_000942548.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 43465 44451 . + . ID=gene-AB11_RS18245;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AB11_RS18245;old_locus_tag=AB11_3431 NZ_JHDH01000144.1 Protein Homology CDS 43465 44451 . + 0 ID=cds-WP_000617698.1;Parent=gene-AB11_RS18245;Dbxref=GenBank:WP_000617698.1;Name=WP_000617698.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AB11_RS18245;product=Gfo/Idh/MocA family protein;protein_id=WP_000617698.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 44734 45699 . + . ID=gene-AB11_RS18250;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AB11_RS18250;old_locus_tag=AB11_3432 NZ_JHDH01000144.1 Protein Homology CDS 44734 45699 . + 0 ID=cds-WP_001098806.1;Parent=gene-AB11_RS18250;Dbxref=GenBank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=AB11_RS18250;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 46098 47342 . + . ID=gene-AB11_RS18255;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AB11_RS18255;old_locus_tag=AB11_3433 NZ_JHDH01000144.1 Protein Homology CDS 46098 47342 . + 0 ID=cds-WP_000211655.1;Parent=gene-AB11_RS18255;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AB11_RS18255;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 47347 47898 . - . ID=gene-AB11_RS18260;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AB11_RS18260;old_locus_tag=AB11_3434 NZ_JHDH01000144.1 Protein Homology CDS 47347 47898 . - 0 ID=cds-WP_000128138.1;Parent=gene-AB11_RS18260;Dbxref=GenBank:WP_000128138.1;Name=WP_000128138.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417561.1;locus_tag=AB11_RS18260;product=YgjV family protein;protein_id=WP_000128138.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 47981 49468 . - . ID=gene-AB11_RS18265;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AB11_RS18265;old_locus_tag=AB11_3435 NZ_JHDH01000144.1 Protein Homology CDS 47981 49468 . - 0 ID=cds-WP_001199390.1;Parent=gene-AB11_RS18265;Dbxref=GenBank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AB11_RS18265;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 49483 50895 . - . ID=gene-AB11_RS18270;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AB11_RS18270;old_locus_tag=AB11_3436 NZ_JHDH01000144.1 Protein Homology CDS 49483 50895 . - 0 ID=cds-WP_000187442.1;Parent=gene-AB11_RS18270;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AB11_RS18270;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 51378 52676 . + . ID=gene-AB11_RS18275;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AB11_RS18275;old_locus_tag=AB11_3437 NZ_JHDH01000144.1 Protein Homology CDS 51378 52676 . + 0 ID=cds-WP_001226465.1;Parent=gene-AB11_RS18275;Dbxref=GenBank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AB11_RS18275;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 52806 53582 . + . ID=gene-AB11_RS18280;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AB11_RS18280;old_locus_tag=AB11_3438 NZ_JHDH01000144.1 Protein Homology CDS 52806 53582 . + 0 ID=cds-WP_000406488.1;Parent=gene-AB11_RS18280;Dbxref=GenBank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AB11_RS18280;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 53822 53905 . + . ID=gene-AB11_RS25355;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AB11_RS25355 NZ_JHDH01000144.1 Protein Homology CDS 53822 53905 . + 0 ID=cds-WP_211180508.1;Parent=gene-AB11_RS25355;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AB11_RS25355;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 53927 54589 . + . ID=gene-AB11_RS18285;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AB11_RS18285;old_locus_tag=AB11_3441 NZ_JHDH01000144.1 Protein Homology CDS 53927 54589 . + 0 ID=cds-WP_000422149.1;Parent=gene-AB11_RS18285;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AB11_RS18285;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 54593 54976 . + . ID=gene-AB11_RS18290;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AB11_RS18290;old_locus_tag=AB11_3442 NZ_JHDH01000144.1 Protein Homology CDS 54593 54976 . + 0 ID=cds-WP_001166760.1;Parent=gene-AB11_RS18290;Dbxref=GenBank:WP_001166760.1;Name=WP_001166760.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AB11_RS18290;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166760.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 55123 55491 . + . ID=gene-AB11_RS18295;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AB11_RS18295;old_locus_tag=AB11_3443 NZ_JHDH01000144.1 Protein Homology CDS 55123 55491 . + 0 ID=cds-WP_001295543.1;Parent=gene-AB11_RS18295;Dbxref=GenBank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AB11_RS18295;product=DUF1090 family protein YqjC;protein_id=WP_001295543.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 55529 55834 . + . ID=gene-AB11_RS18300;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AB11_RS18300;old_locus_tag=AB11_3444 NZ_JHDH01000144.1 Protein Homology CDS 55529 55834 . + 0 ID=cds-WP_000031415.1;Parent=gene-AB11_RS18300;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AB11_RS18300;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 55837 56241 . + . ID=gene-AB11_RS18305;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AB11_RS18305;old_locus_tag=AB11_3445 NZ_JHDH01000144.1 Protein Homology CDS 55837 56241 . + 0 ID=cds-WP_000785722.1;Parent=gene-AB11_RS18305;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AB11_RS18305;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 56231 56530 . + . ID=gene-AB11_RS18310;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AB11_RS18310;old_locus_tag=AB11_3446 NZ_JHDH01000144.1 Protein Homology CDS 56231 56530 . + 0 ID=cds-WP_000096091.1;Parent=gene-AB11_RS18310;Dbxref=GenBank:WP_000096091.1;Name=WP_000096091.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417571.1;locus_tag=AB11_RS18310;product=YqjK-like family protein;protein_id=WP_000096091.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 56716 57108 . + . ID=gene-AB11_RS18315;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AB11_RS18315;old_locus_tag=AB11_3447 NZ_JHDH01000144.1 Protein Homology CDS 56716 57108 . + 0 ID=cds-WP_000732240.1;Parent=gene-AB11_RS18315;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AB11_RS18315;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 57178 58164 . + . ID=gene-AB11_RS18320;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AB11_RS18320;old_locus_tag=AB11_3448 NZ_JHDH01000144.1 Protein Homology CDS 57178 58164 . + 0 ID=cds-WP_000531213.1;Parent=gene-AB11_RS18320;Dbxref=GenBank:WP_000531213.1;Name=WP_000531213.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417573.1;locus_tag=AB11_RS18320;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531213.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 58458 58823 . + . ID=gene-AB11_RS18325;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AB11_RS18325;old_locus_tag=AB11_3449 NZ_JHDH01000144.1 Protein Homology CDS 58458 58823 . + 0 ID=cds-WP_000384145.1;Parent=gene-AB11_RS18325;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AB11_RS18325;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 59065 59421 . + . ID=gene-AB11_RS18330;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;locus_tag=AB11_RS18330;old_locus_tag=AB11_3450 NZ_JHDH01000144.1 Protein Homology CDS 59065 59421 . + 0 ID=cds-WP_001198807.1;Parent=gene-AB11_RS18330;Dbxref=GenBank:WP_001198807.1;Name=WP_001198807.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AB11_RS18330;product=DUF805 domain-containing protein;protein_id=WP_001198807.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 59472 60368 . - . ID=gene-AB11_RS18335;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AB11_RS18335;old_locus_tag=AB11_3451 NZ_JHDH01000144.1 Protein Homology CDS 59472 60368 . - 0 ID=cds-WP_001041009.1;Parent=gene-AB11_RS18335;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AB11_RS18335;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 60473 61174 . + . ID=gene-AB11_RS18340;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AB11_RS18340;old_locus_tag=AB11_3452 NZ_JHDH01000144.1 Protein Homology CDS 60473 61174 . + 0 ID=cds-WP_000633576.1;Parent=gene-AB11_RS18340;Dbxref=GenBank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AB11_RS18340;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 61197 61361 . + . ID=gene-AB11_RS18345;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AB11_RS18345;old_locus_tag=AB11_3453 NZ_JHDH01000144.1 Protein Homology CDS 61197 61361 . + 0 ID=cds-WP_001345966.1;Parent=gene-AB11_RS18345;Dbxref=GenBank:WP_001345966.1;Name=WP_001345966.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417578.2;locus_tag=AB11_RS18345;product=protein YhaL;protein_id=WP_001345966.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 61495 62805 . - . ID=gene-AB11_RS18350;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AB11_RS18350;old_locus_tag=AB11_3454 NZ_JHDH01000144.1 Protein Homology CDS 61495 62805 . - 0 ID=cds-WP_000460499.1;Parent=gene-AB11_RS18350;Dbxref=GenBank:WP_000460499.1;Name=WP_000460499.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026202.1;locus_tag=AB11_RS18350;product=cysteine desulfidase;protein_id=WP_000460499.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 62833 64164 . - . ID=gene-AB11_RS18355;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AB11_RS18355;old_locus_tag=AB11_3455 NZ_JHDH01000144.1 Protein Homology CDS 62833 64164 . - 0 ID=cds-WP_000401598.1;Parent=gene-AB11_RS18355;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AB11_RS18355;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 64439 65803 . - . ID=gene-AB11_RS18360;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AB11_RS18360;old_locus_tag=AB11_3456 NZ_JHDH01000144.1 Protein Homology CDS 64439 65803 . - 0 ID=cds-WP_000622126.1;Parent=gene-AB11_RS18360;Dbxref=GenBank:WP_000622126.1;Name=WP_000622126.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AB11_RS18360;product=L-serine ammonia-lyase;protein_id=WP_000622126.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 65875 66264 . - . ID=gene-AB11_RS18365;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AB11_RS18365;old_locus_tag=AB11_3457 NZ_JHDH01000144.1 Protein Homology CDS 65875 66264 . - 0 ID=cds-WP_000719990.1;Parent=gene-AB11_RS18365;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AB11_RS18365;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 66278 68572 . - . ID=gene-AB11_RS18370;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AB11_RS18370;old_locus_tag=AB11_3458 NZ_JHDH01000144.1 Protein Homology CDS 66278 68572 . - 0 ID=cds-WP_032223851.1;Parent=gene-AB11_RS18370;Dbxref=GenBank:WP_032223851.1;Name=WP_032223851.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AB11_RS18370;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_032223851.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 68606 69814 . - . ID=gene-AB11_RS18375;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AB11_RS18375;old_locus_tag=AB11_3459 NZ_JHDH01000144.1 Protein Homology CDS 68606 69814 . - 0 ID=cds-WP_001295545.1;Parent=gene-AB11_RS18375;Dbxref=GenBank:WP_001295545.1;Name=WP_001295545.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AB11_RS18375;product=propionate kinase;protein_id=WP_001295545.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 69840 71171 . - . ID=gene-AB11_RS18380;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AB11_RS18380;old_locus_tag=AB11_3460 NZ_JHDH01000144.1 Protein Homology CDS 69840 71171 . - 0 ID=cds-WP_000107723.1;Parent=gene-AB11_RS18380;Dbxref=GenBank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AB11_RS18380;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 71193 72182 . - . ID=gene-AB11_RS18385;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AB11_RS18385;old_locus_tag=AB11_3461 NZ_JHDH01000144.1 Protein Homology CDS 71193 72182 . - 0 ID=cds-WP_000548347.1;Parent=gene-AB11_RS18385;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AB11_RS18385;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 72281 73219 . - . ID=gene-AB11_RS18390;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AB11_RS18390;old_locus_tag=AB11_3462 NZ_JHDH01000144.1 Protein Homology CDS 72281 73219 . - 0 ID=cds-WP_000104211.1;Parent=gene-AB11_RS18390;Dbxref=GenBank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AB11_RS18390;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 73534 73752 . + . ID=gene-AB11_RS25360;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AB11_RS25360 NZ_JHDH01000144.1 Protein Homology CDS 73534 73752 . + 0 ID=cds-WP_001301311.1;Parent=gene-AB11_RS25360;Dbxref=GenBank:WP_001301311.1;Name=WP_001301311.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AB11_RS25360;product=transcriptional activator TdcR;protein_id=WP_001301311.1;transl_table=11 NZ_JHDH01000144.1 RefSeq gene 74008 74547 . + . ID=gene-AB11_RS18400;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AB11_RS18400;old_locus_tag=AB11_3465 NZ_JHDH01000144.1 Protein Homology CDS 74008 74547 . + 0 ID=cds-WP_000675733.1;Parent=gene-AB11_RS18400;Dbxref=GenBank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AB11_RS18400;product=protein YhaB;protein_id=WP_000675733.1;transl_table=11 NZ_JHDH01000144.1 RefSeq pseudogene 74569 75249 . + . ID=gene-AB11_RS18405;Name=AB11_RS18405;end_range=75249,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18405;old_locus_tag=AB11_3466;partial=true;pseudo=true NZ_JHDH01000144.1 Protein Homology CDS 74569 75249 . + 0 ID=cds-AB11_RS18405;Parent=gene-AB11_RS18405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=75249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AB11_RS18405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000144.1 RefSeq pseudogene 75306 75900 . + . ID=gene-AB11_RS18410;Name=AB11_RS18410;end_range=75900,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18410;old_locus_tag=AB11_3467;partial=true;pseudo=true NZ_JHDH01000144.1 Protein Homology CDS 75306 75900 . + 0 ID=cds-AB11_RS18410;Parent=gene-AB11_RS18410;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=75900,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB11_RS18410;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000145.1 1 100595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000145.1 RefSeq region 1 100595 . + . ID=NZ_JHDH01000145.1:1..100595;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000145.1 RefSeq pseudogene 1 306 . + . ID=gene-AB11_RS18415;Name=AB11_RS18415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18415;old_locus_tag=AB11_3468;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000145.1 Protein Homology CDS 1 306 . + 0 ID=cds-AB11_RS18415;Parent=gene-AB11_RS18415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS18415;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000145.1 RefSeq pseudogene 279 836 . + . ID=gene-AB11_RS18420;Name=AB11_RS18420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS18420;partial=true;pseudo=true;start_range=.,279 NZ_JHDH01000145.1 Protein Homology CDS 279 836 . + 0 ID=cds-AB11_RS18420;Parent=gene-AB11_RS18420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AB11_RS18420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,279;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 1563 1939 . - . ID=gene-AB11_RS18425;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AB11_RS18425 NZ_JHDH01000145.1 cmsearch RNase_P_RNA 1563 1939 . - . ID=rna-AB11_RS18425;Parent=gene-AB11_RS18425;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS18425;product=RNase P RNA component class A NZ_JHDH01000145.1 cmsearch exon 1563 1939 . - . ID=exon-AB11_RS18425-1;Parent=rna-AB11_RS18425;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS18425;product=RNase P RNA component class A NZ_JHDH01000145.1 RefSeq gene 1972 3117 . - . ID=gene-AB11_RS18430;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AB11_RS18430;old_locus_tag=AB11_3470 NZ_JHDH01000145.1 Protein Homology CDS 1972 3117 . - 0 ID=cds-WP_001300387.1;Parent=gene-AB11_RS18430;Dbxref=GenBank:WP_001300387.1;Name=WP_001300387.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417593.4;locus_tag=AB11_RS18430;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 3214 4104 . - . ID=gene-AB11_RS18435;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AB11_RS18435;old_locus_tag=AB11_3471 NZ_JHDH01000145.1 Protein Homology CDS 3214 4104 . - 0 ID=cds-WP_001303675.1;Parent=gene-AB11_RS18435;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AB11_RS18435;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 4134 4904 . - . ID=gene-AB11_RS18440;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AB11_RS18440;old_locus_tag=AB11_3472 NZ_JHDH01000145.1 Protein Homology CDS 4134 4904 . - 0 ID=cds-WP_001058209.1;Parent=gene-AB11_RS18440;Dbxref=GenBank:WP_001058209.1;Name=WP_001058209.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=AB11_RS18440;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058209.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 4920 6254 . - . ID=gene-AB11_RS18445;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AB11_RS18445;old_locus_tag=AB11_3473 NZ_JHDH01000145.1 Protein Homology CDS 4920 6254 . - 0 ID=cds-WP_000599636.1;Parent=gene-AB11_RS18445;Dbxref=GenBank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AB11_RS18445;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 6629 8200 . + . ID=gene-AB11_RS18450;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AB11_RS18450;old_locus_tag=AB11_3475 NZ_JHDH01000145.1 Protein Homology CDS 6629 8200 . + 0 ID=cds-WP_001273753.1;Parent=gene-AB11_RS18450;Dbxref=GenBank:WP_001273753.1;Name=WP_001273753.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417597.1;locus_tag=AB11_RS18450;product=galactarate dehydratase;protein_id=WP_001273753.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 8349 8684 . + . ID=gene-AB11_RS18455;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AB11_RS18455 NZ_JHDH01000145.1 Protein Homology CDS 8349 8684 . + 0 ID=cds-WP_001307405.1;Parent=gene-AB11_RS18455;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AB11_RS18455;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 8684 9148 . + . ID=gene-AB11_RS18460;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AB11_RS18460;old_locus_tag=AB11_3477 NZ_JHDH01000145.1 Protein Homology CDS 8684 9148 . + 0 ID=cds-WP_000347273.1;Parent=gene-AB11_RS18460;Dbxref=GenBank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AB11_RS18460;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347273.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 9203 10012 . - . ID=gene-AB11_RS18465;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AB11_RS18465;old_locus_tag=AB11_3478 NZ_JHDH01000145.1 Protein Homology CDS 9203 10012 . - 0 ID=cds-WP_000072187.1;Parent=gene-AB11_RS18465;Dbxref=GenBank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AB11_RS18465;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 10261 11541 . + . ID=gene-AB11_RS18470;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AB11_RS18470;old_locus_tag=AB11_3479 NZ_JHDH01000145.1 Protein Homology CDS 10261 11541 . + 0 ID=cds-WP_000681920.1;Parent=gene-AB11_RS18470;Dbxref=GenBank:WP_000681920.1;Name=WP_000681920.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AB11_RS18470;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681920.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 11564 12037 . + . ID=gene-AB11_RS18475;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AB11_RS18475;old_locus_tag=AB11_3480 NZ_JHDH01000145.1 Protein Homology CDS 11564 12037 . + 0 ID=cds-WP_001336162.1;Parent=gene-AB11_RS18475;Dbxref=GenBank:WP_001336162.1;Name=WP_001336162.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417602.4;locus_tag=AB11_RS18475;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001336162.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 12048 12827 . + . ID=gene-AB11_RS18480;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AB11_RS18480;old_locus_tag=AB11_3481 NZ_JHDH01000145.1 Protein Homology CDS 12048 12827 . + 0 ID=cds-WP_000406209.1;Parent=gene-AB11_RS18480;Dbxref=GenBank:WP_000406209.1;Name=WP_000406209.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AB11_RS18480;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406209.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 12817 13695 . + . ID=gene-AB11_RS18485;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AB11_RS18485;old_locus_tag=AB11_3482 NZ_JHDH01000145.1 Protein Homology CDS 12817 13695 . + 0 ID=cds-WP_001295548.1;Parent=gene-AB11_RS18485;Dbxref=GenBank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AB11_RS18485;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 13713 14147 . + . ID=gene-AB11_RS18490;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AB11_RS18490;old_locus_tag=AB11_3483 NZ_JHDH01000145.1 Protein Homology CDS 13713 14147 . + 0 ID=cds-WP_000948824.1;Parent=gene-AB11_RS18490;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AB11_RS18490;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 14144 15277 . + . ID=gene-AB11_RS18495;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AB11_RS18495;old_locus_tag=AB11_3484 NZ_JHDH01000145.1 Protein Homology CDS 14144 15277 . + 0 ID=cds-WP_001326623.1;Parent=gene-AB11_RS18495;Dbxref=GenBank:WP_001326623.1;Name=WP_001326623.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AB11_RS18495;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001326623.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 15628 16782 . + . ID=gene-AB11_RS18500;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AB11_RS18500;old_locus_tag=AB11_3486 NZ_JHDH01000145.1 Protein Homology CDS 15628 16782 . + 0 ID=cds-WP_001114869.1;Parent=gene-AB11_RS18500;Dbxref=GenBank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AB11_RS18500;product=AgaS family sugar isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 16795 17655 . + . ID=gene-AB11_RS18505;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AB11_RS18505;old_locus_tag=AB11_3487 NZ_JHDH01000145.1 Protein Homology CDS 16795 17655 . + 0 ID=cds-WP_000022766.1;Parent=gene-AB11_RS18505;Dbxref=GenBank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AB11_RS18505;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 17822 18298 . + . ID=gene-AB11_RS18510;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=AB11_RS18510;old_locus_tag=AB11_3488 NZ_JHDH01000145.1 Protein Homology CDS 17822 18298 . + 0 ID=cds-WP_000203711.1;Parent=gene-AB11_RS18510;Dbxref=GenBank:WP_000203711.1;Name=WP_000203711.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417607.1;locus_tag=AB11_RS18510;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000203711.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 18337 19140 . + . ID=gene-AB11_RS18515;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AB11_RS18515;old_locus_tag=AB11_3489 NZ_JHDH01000145.1 Protein Homology CDS 18337 19140 . + 0 ID=cds-WP_000544489.1;Parent=gene-AB11_RS18515;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AB11_RS18515;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 19130 19921 . + . ID=gene-AB11_RS18520;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=AB11_RS18520;old_locus_tag=AB11_3490 NZ_JHDH01000145.1 Protein Homology CDS 19130 19921 . + 0 ID=cds-WP_000534347.1;Parent=gene-AB11_RS18520;Dbxref=GenBank:WP_000534347.1;Name=WP_000534347.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417609.1;locus_tag=AB11_RS18520;product=PTS galactosamine transporter subunit IID;protein_id=WP_000534347.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 19922 20677 . + . ID=gene-AB11_RS18525;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=AB11_RS18525;old_locus_tag=AB11_3491 NZ_JHDH01000145.1 Protein Homology CDS 19922 20677 . + 0 ID=cds-WP_001311150.1;Parent=gene-AB11_RS18525;Dbxref=GenBank:WP_001311150.1;Name=WP_001311150.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417610.1;locus_tag=AB11_RS18525;product=galactosamine-6-phosphate isomerase;protein_id=WP_001311150.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 21078 21662 . + . ID=gene-AB11_RS18530;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;locus_tag=AB11_RS18530;old_locus_tag=AB11_3492 NZ_JHDH01000145.1 Protein Homology CDS 21078 21662 . + 0 ID=cds-WP_001045432.1;Parent=gene-AB11_RS18530;Dbxref=GenBank:WP_001045432.1;Name=WP_001045432.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraH;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417611.1;locus_tag=AB11_RS18530;product=fimbrial protein;protein_id=WP_001045432.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 21742 22437 . + . ID=gene-AB11_RS18535;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=AB11_RS18535;old_locus_tag=AB11_3493 NZ_JHDH01000145.1 Protein Homology CDS 21742 22437 . + 0 ID=cds-WP_021570957.1;Parent=gene-AB11_RS18535;Dbxref=GenBank:WP_021570957.1;Name=WP_021570957.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;gene=yraI;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AB11_RS18535;product=fimbrial biogenesis chaperone;protein_id=WP_021570957.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 22466 24982 . + . ID=gene-AB11_RS18540;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=AB11_RS18540;old_locus_tag=AB11_3494 NZ_JHDH01000145.1 Protein Homology CDS 22466 24982 . + 0 ID=cds-WP_032223872.1;Parent=gene-AB11_RS18540;Dbxref=GenBank:WP_032223872.1;Name=WP_032223872.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=yraJ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AB11_RS18540;product=fimbria/pilus outer membrane usher protein;protein_id=WP_032223872.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 24993 26084 . + . ID=gene-AB11_RS18545;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=AB11_RS18545;old_locus_tag=AB11_3495 NZ_JHDH01000145.1 Protein Homology CDS 24993 26084 . + 0 ID=cds-WP_000816992.1;Parent=gene-AB11_RS18545;Dbxref=GenBank:WP_000816992.1;Name=WP_000816992.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraK;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AB11_RS18545;product=fimbrial protein;protein_id=WP_000816992.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 26127 26987 . - . ID=gene-AB11_RS18550;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AB11_RS18550;old_locus_tag=AB11_3496 NZ_JHDH01000145.1 Protein Homology CDS 26127 26987 . - 0 ID=cds-WP_000809262.1;Parent=gene-AB11_RS18550;Dbxref=GenBank:WP_000809262.1;Name=WP_000809262.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AB11_RS18550;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 27052 29088 . + . ID=gene-AB11_RS18555;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AB11_RS18555;old_locus_tag=AB11_3497 NZ_JHDH01000145.1 Protein Homology CDS 27052 29088 . + 0 ID=cds-WP_032223862.1;Parent=gene-AB11_RS18555;Dbxref=GenBank:WP_032223862.1;Name=WP_032223862.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AB11_RS18555;product=penicillin-binding protein activator LpoA;protein_id=WP_032223862.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 29046 29441 . + . ID=gene-AB11_RS18560;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AB11_RS18560;old_locus_tag=AB11_3498 NZ_JHDH01000145.1 Protein Homology CDS 29046 29441 . + 0 ID=cds-WP_001486158.1;Parent=gene-AB11_RS18560;Dbxref=GenBank:WP_001486158.1;Name=WP_001486158.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AB11_RS18560;product=YraN family protein;protein_id=WP_001486158.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 29461 30051 . + . ID=gene-AB11_RS18565;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AB11_RS18565;old_locus_tag=AB11_3499 NZ_JHDH01000145.1 Protein Homology CDS 29461 30051 . + 0 ID=cds-WP_001158034.1;Parent=gene-AB11_RS18565;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AB11_RS18565;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 30061 30636 . + . ID=gene-AB11_RS18570;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AB11_RS18570;old_locus_tag=AB11_3500 NZ_JHDH01000145.1 Protein Homology CDS 30061 30636 . + 0 ID=cds-WP_000646033.1;Parent=gene-AB11_RS18570;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AB11_RS18570;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 30750 31790 . - . ID=gene-AB11_RS18575;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AB11_RS18575;old_locus_tag=AB11_3501 NZ_JHDH01000145.1 Protein Homology CDS 30750 31790 . - 0 ID=cds-WP_032223865.1;Parent=gene-AB11_RS18575;Dbxref=GenBank:WP_032223865.1;Name=WP_032223865.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AB11_RS18575;product=permease;protein_id=WP_032223865.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 31863 32498 . - . ID=gene-AB11_RS18580;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AB11_RS18580;old_locus_tag=AB11_3502 NZ_JHDH01000145.1 Protein Homology CDS 31863 32498 . - 0 ID=cds-WP_001300423.1;Parent=gene-AB11_RS18580;Dbxref=GenBank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AB11_RS18580;product=NAD(P)H-binding protein;protein_id=WP_001300423.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 32626 33144 . + . ID=gene-AB11_RS18585;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AB11_RS18585;old_locus_tag=AB11_3503 NZ_JHDH01000145.1 Protein Homology CDS 32626 33144 . + 0 ID=cds-WP_000037608.1;Parent=gene-AB11_RS18585;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AB11_RS18585;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 33124 33567 . - . ID=gene-AB11_RS18590;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AB11_RS18590;old_locus_tag=AB11_3504 NZ_JHDH01000145.1 Protein Homology CDS 33124 33567 . - 0 ID=cds-WP_000449030.1;Parent=gene-AB11_RS18590;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AB11_RS18590;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 33618 33920 . + . ID=gene-AB11_RS18595;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AB11_RS18595;old_locus_tag=AB11_3505 NZ_JHDH01000145.1 Protein Homology CDS 33618 33920 . + 0 ID=cds-WP_000189333.1;Parent=gene-AB11_RS18595;Dbxref=GenBank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417624.1;locus_tag=AB11_RS18595;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189333.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 33907 34410 . - . ID=gene-AB11_RS18600;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AB11_RS18600;old_locus_tag=AB11_3506 NZ_JHDH01000145.1 Protein Homology CDS 33907 34410 . - 0 ID=cds-WP_000908554.1;Parent=gene-AB11_RS18600;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AB11_RS18600;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 34404 34928 . - . ID=gene-AB11_RS18605;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AB11_RS18605;old_locus_tag=AB11_3507 NZ_JHDH01000145.1 Protein Homology CDS 34404 34928 . - 0 ID=cds-WP_001295552.1;Parent=gene-AB11_RS18605;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AB11_RS18605;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 35137 36132 . + . ID=gene-AB11_RS18610;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AB11_RS18610;old_locus_tag=AB11_3508 NZ_JHDH01000145.1 Protein Homology CDS 35137 36132 . + 0 ID=cds-WP_001311152.1;Parent=gene-AB11_RS18610;Dbxref=GenBank:WP_001311152.1;Name=WP_001311152.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AB11_RS18610;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_001311152.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 36141 37019 . + . ID=gene-AB11_RS18615;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AB11_RS18615;old_locus_tag=AB11_3509 NZ_JHDH01000145.1 Protein Homology CDS 36141 37019 . + 0 ID=cds-WP_001301318.1;Parent=gene-AB11_RS18615;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AB11_RS18615;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 37100 38107 . + . ID=gene-AB11_RS18620;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AB11_RS18620;old_locus_tag=AB11_3510 NZ_JHDH01000145.1 Protein Homology CDS 37100 38107 . + 0 ID=cds-WP_000130380.1;Parent=gene-AB11_RS18620;Dbxref=GenBank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AB11_RS18620;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 38225 39469 . - . ID=gene-AB11_RS18625;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AB11_RS18625;old_locus_tag=AB11_3511 NZ_JHDH01000145.1 Protein Homology CDS 38225 39469 . - 0 ID=cds-WP_032179767.1;Parent=gene-AB11_RS18625;Dbxref=GenBank:WP_032179767.1;Name=WP_032179767.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AB11_RS18625;product=tryptophan permease;protein_id=WP_032179767.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 39623 41512 . - . ID=gene-AB11_RS18630;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AB11_RS18630;old_locus_tag=AB11_3513 NZ_JHDH01000145.1 Protein Homology CDS 39623 41512 . - 0 ID=cds-WP_001295553.1;Parent=gene-AB11_RS18630;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AB11_RS18630;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 41505 41585 . - . ID=gene-AB11_RS18635;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AB11_RS18635 NZ_JHDH01000145.1 Protein Homology CDS 41505 41585 . - 0 ID=cds-WP_010723222.1;Parent=gene-AB11_RS18635;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AB11_RS18635;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 41692 42576 . - . ID=gene-AB11_RS18640;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AB11_RS18640;old_locus_tag=AB11_3514 NZ_JHDH01000145.1 Protein Homology CDS 41692 42576 . - 0 ID=cds-WP_000802080.1;Parent=gene-AB11_RS18640;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AB11_RS18640;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 42685 44820 . - . ID=gene-AB11_RS18645;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AB11_RS18645;old_locus_tag=AB11_3515 NZ_JHDH01000145.1 Protein Homology CDS 42685 44820 . - 0 ID=cds-WP_001295554.1;Parent=gene-AB11_RS18645;Dbxref=GenBank:WP_001295554.1;Name=WP_001295554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AB11_RS18645;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 45067 45336 . - . ID=gene-AB11_RS18650;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AB11_RS18650;old_locus_tag=AB11_3516 NZ_JHDH01000145.1 Protein Homology CDS 45067 45336 . - 0 ID=cds-WP_000059466.1;Parent=gene-AB11_RS18650;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AB11_RS18650;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 45485 46429 . - . ID=gene-AB11_RS18655;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AB11_RS18655;old_locus_tag=AB11_3517 NZ_JHDH01000145.1 Protein Homology CDS 45485 46429 . - 0 ID=cds-WP_000089698.1;Parent=gene-AB11_RS18655;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AB11_RS18655;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 46429 46830 . - . ID=gene-AB11_RS18660;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AB11_RS18660;old_locus_tag=AB11_3518 NZ_JHDH01000145.1 Protein Homology CDS 46429 46830 . - 0 ID=cds-WP_001040205.1;Parent=gene-AB11_RS18660;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AB11_RS18660;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 46994 49666 . - . ID=gene-AB11_RS18665;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AB11_RS18665;old_locus_tag=AB11_3519 NZ_JHDH01000145.1 Protein Homology CDS 46994 49666 . - 0 ID=cds-WP_000133044.1;Parent=gene-AB11_RS18665;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AB11_RS18665;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 49691 51178 . - . ID=gene-AB11_RS18670;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AB11_RS18670;old_locus_tag=AB11_3520 NZ_JHDH01000145.1 Protein Homology CDS 49691 51178 . - 0 ID=cds-WP_001031057.1;Parent=gene-AB11_RS18670;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AB11_RS18670;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 51206 51658 . - . ID=gene-AB11_RS18675;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AB11_RS18675;old_locus_tag=AB11_3521 NZ_JHDH01000145.1 Protein Homology CDS 51206 51658 . - 0 ID=cds-WP_001300397.1;Parent=gene-AB11_RS18675;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AB11_RS18675;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 51865 51941 . - . ID=gene-AB11_RS18680;Name=AB11_RS18680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS18680;old_locus_tag=AB11_3522 NZ_JHDH01000145.1 tRNAscan-SE tRNA 51865 51941 . - . ID=rna-AB11_RS18680;Parent=gene-AB11_RS18680;anticodon=(pos:complement(51905..51907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18680;product=tRNA-Met NZ_JHDH01000145.1 tRNAscan-SE exon 51865 51941 . - . ID=exon-AB11_RS18680-1;Parent=rna-AB11_RS18680;anticodon=(pos:complement(51905..51907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18680;product=tRNA-Met NZ_JHDH01000145.1 RefSeq gene 52289 53632 . + . ID=gene-AB11_RS18685;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AB11_RS18685;old_locus_tag=AB11_3524 NZ_JHDH01000145.1 Protein Homology CDS 52289 53632 . + 0 ID=cds-WP_000207680.1;Parent=gene-AB11_RS18685;Dbxref=GenBank:WP_000207680.1;Name=WP_000207680.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AB11_RS18685;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 53640 55265 . - . ID=gene-AB11_RS18690;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AB11_RS18690;old_locus_tag=AB11_3525 NZ_JHDH01000145.1 Protein Homology CDS 53640 55265 . - 0 ID=cds-WP_001333576.1;Parent=gene-AB11_RS18690;Dbxref=GenBank:WP_001333576.1;Name=WP_001333576.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AB11_RS18690;product=phosphoethanolamine transferase;protein_id=WP_001333576.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 55724 55810 . - . ID=gene-AB11_RS18695;Name=AB11_RS18695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS18695;old_locus_tag=AB11_3526 NZ_JHDH01000145.1 tRNAscan-SE tRNA 55724 55810 . - . ID=rna-AB11_RS18695;Parent=gene-AB11_RS18695;anticodon=(pos:complement(55774..55776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18695;product=tRNA-Leu NZ_JHDH01000145.1 tRNAscan-SE exon 55724 55810 . - . ID=exon-AB11_RS18695-1;Parent=rna-AB11_RS18695;anticodon=(pos:complement(55774..55776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS18695;product=tRNA-Leu NZ_JHDH01000145.1 RefSeq gene 55825 56157 . - . ID=gene-AB11_RS18700;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AB11_RS18700;old_locus_tag=AB11_3527 NZ_JHDH01000145.1 Protein Homology CDS 55825 56157 . - 0 ID=cds-WP_001295556.1;Parent=gene-AB11_RS18700;Dbxref=GenBank:WP_001295556.1;Name=WP_001295556.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AB11_RS18700;product=preprotein translocase subunit SecG;protein_id=WP_001295556.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 56385 57722 . - . ID=gene-AB11_RS18705;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AB11_RS18705;old_locus_tag=AB11_3528 NZ_JHDH01000145.1 Protein Homology CDS 56385 57722 . - 0 ID=cds-WP_000071134.1;Parent=gene-AB11_RS18705;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AB11_RS18705;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 57715 58563 . - . ID=gene-AB11_RS18710;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AB11_RS18710;old_locus_tag=AB11_3529 NZ_JHDH01000145.1 Protein Homology CDS 57715 58563 . - 0 ID=cds-WP_021570958.1;Parent=gene-AB11_RS18710;Dbxref=GenBank:WP_021570958.1;Name=WP_021570958.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AB11_RS18710;product=dihydropteroate synthase;protein_id=WP_021570958.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 58653 60587 . - . ID=gene-AB11_RS18715;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AB11_RS18715;old_locus_tag=AB11_3530 NZ_JHDH01000145.1 Protein Homology CDS 58653 60587 . - 0 ID=cds-WP_001107467.1;Parent=gene-AB11_RS18715;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AB11_RS18715;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 60687 61316 . - . ID=gene-AB11_RS18720;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AB11_RS18720;old_locus_tag=AB11_3531 NZ_JHDH01000145.1 Protein Homology CDS 60687 61316 . - 0 ID=cds-WP_000145975.1;Parent=gene-AB11_RS18720;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AB11_RS18720;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 61442 61735 . + . ID=gene-AB11_RS18725;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AB11_RS18725;old_locus_tag=AB11_3532 NZ_JHDH01000145.1 Protein Homology CDS 61442 61735 . + 0 ID=cds-WP_001054420.1;Parent=gene-AB11_RS18725;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AB11_RS18725;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 61891 62367 . - . ID=gene-AB11_RS18730;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AB11_RS18730;old_locus_tag=AB11_3533 NZ_JHDH01000145.1 Protein Homology CDS 61891 62367 . - 0 ID=cds-WP_001148001.1;Parent=gene-AB11_RS18730;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AB11_RS18730;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 62615 64048 . + . ID=gene-AB11_RS18735;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AB11_RS18735;old_locus_tag=AB11_3534 NZ_JHDH01000145.1 Protein Homology CDS 62615 64048 . + 0 ID=cds-WP_001212619.1;Parent=gene-AB11_RS18735;Dbxref=GenBank:WP_001212619.1;Name=WP_001212619.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AB11_RS18735;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212619.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 64234 65406 . - . ID=gene-AB11_RS18740;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AB11_RS18740;old_locus_tag=AB11_3536 NZ_JHDH01000145.1 Protein Homology CDS 64234 65406 . - 0 ID=cds-WP_000673575.1;Parent=gene-AB11_RS18740;Dbxref=GenBank:WP_000673575.1;Name=WP_000673575.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417650.1;locus_tag=AB11_RS18740;product=Obg family GTPase CgtA;protein_id=WP_000673575.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 65422 66387 . - . ID=gene-AB11_RS18745;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AB11_RS18745;old_locus_tag=AB11_3537 NZ_JHDH01000145.1 Protein Homology CDS 65422 66387 . - 0 ID=cds-WP_000813037.1;Parent=gene-AB11_RS18745;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AB11_RS18745;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 66514 66771 . - . ID=gene-AB11_RS18750;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AB11_RS18750;old_locus_tag=AB11_3538 NZ_JHDH01000145.1 Protein Homology CDS 66514 66771 . - 0 ID=cds-WP_000940595.1;Parent=gene-AB11_RS18750;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AB11_RS18750;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 66792 67103 . - . ID=gene-AB11_RS18755;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AB11_RS18755;old_locus_tag=AB11_3539 NZ_JHDH01000145.1 Protein Homology CDS 66792 67103 . - 0 ID=cds-WP_000271401.1;Parent=gene-AB11_RS18755;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AB11_RS18755;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 67362 68333 . + . ID=gene-AB11_RS18760;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AB11_RS18760;old_locus_tag=AB11_3540 NZ_JHDH01000145.1 Protein Homology CDS 67362 68333 . + 0 ID=cds-WP_001047336.1;Parent=gene-AB11_RS18760;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AB11_RS18760;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 68561 68839 . + . ID=gene-AB11_RS18765;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AB11_RS18765;old_locus_tag=AB11_3541 NZ_JHDH01000145.1 Protein Homology CDS 68561 68839 . + 0 ID=cds-WP_000445413.1;Parent=gene-AB11_RS18765;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AB11_RS18765;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 68887 70146 . - . ID=gene-AB11_RS18770;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AB11_RS18770;old_locus_tag=AB11_3542 NZ_JHDH01000145.1 Protein Homology CDS 68887 70146 . - 0 ID=cds-WP_000357259.1;Parent=gene-AB11_RS18770;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AB11_RS18770;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 70201 70455 . - . ID=gene-AB11_RS18775;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AB11_RS18775;old_locus_tag=AB11_3543 NZ_JHDH01000145.1 Protein Homology CDS 70201 70455 . - 0 ID=cds-WP_000429656.1;Parent=gene-AB11_RS18775;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AB11_RS18775;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 70615 70908 . - . ID=gene-AB11_RS18780;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AB11_RS18780;old_locus_tag=AB11_3544 NZ_JHDH01000145.1 Protein Homology CDS 70615 70908 . - 0 ID=cds-WP_000004488.1;Parent=gene-AB11_RS18780;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AB11_RS18780;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 70908 71543 . - . ID=gene-AB11_RS18785;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AB11_RS18785;old_locus_tag=AB11_3545 NZ_JHDH01000145.1 Protein Homology CDS 70908 71543 . - 0 ID=cds-WP_000476487.1;Parent=gene-AB11_RS18785;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AB11_RS18785;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 71562 72113 . - . ID=gene-AB11_RS18790;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AB11_RS18790;old_locus_tag=AB11_3546 NZ_JHDH01000145.1 Protein Homology CDS 71562 72113 . - 0 ID=cds-WP_001296448.1;Parent=gene-AB11_RS18790;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AB11_RS18790;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 72118 72900 . - . ID=gene-AB11_RS18795;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AB11_RS18795;old_locus_tag=AB11_3547 NZ_JHDH01000145.1 Protein Homology CDS 72118 72900 . - 0 ID=cds-WP_000925795.1;Parent=gene-AB11_RS18795;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AB11_RS18795;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 72908 73717 . - . ID=gene-AB11_RS18800;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AB11_RS18800;old_locus_tag=AB11_3548 NZ_JHDH01000145.1 Protein Homology CDS 72908 73717 . - 0 ID=cds-WP_000438245.1;Parent=gene-AB11_RS18800;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AB11_RS18800;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 73927 74904 . + . ID=gene-AB11_RS18805;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AB11_RS18805;old_locus_tag=AB11_3549 NZ_JHDH01000145.1 Protein Homology CDS 73927 74904 . + 0 ID=cds-WP_000922901.1;Parent=gene-AB11_RS18805;Dbxref=GenBank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AB11_RS18805;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 74918 75904 . + . ID=gene-AB11_RS18810;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AB11_RS18810;old_locus_tag=AB11_3550 NZ_JHDH01000145.1 Protein Homology CDS 74918 75904 . + 0 ID=cds-WP_001295557.1;Parent=gene-AB11_RS18810;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AB11_RS18810;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 75925 76491 . + . ID=gene-AB11_RS18815;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AB11_RS18815;old_locus_tag=AB11_3551 NZ_JHDH01000145.1 Protein Homology CDS 75925 76491 . + 0 ID=cds-WP_000030005.1;Parent=gene-AB11_RS18815;Dbxref=GenBank:WP_000030005.1;Name=WP_000030005.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AB11_RS18815;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 76488 77063 . + . ID=gene-AB11_RS18820;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AB11_RS18820;old_locus_tag=AB11_3552 NZ_JHDH01000145.1 Protein Homology CDS 76488 77063 . + 0 ID=cds-WP_000030537.1;Parent=gene-AB11_RS18820;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AB11_RS18820;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 77032 77589 . + . ID=gene-AB11_RS18825;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AB11_RS18825;old_locus_tag=AB11_3553 NZ_JHDH01000145.1 Protein Homology CDS 77032 77589 . + 0 ID=cds-WP_000669785.1;Parent=gene-AB11_RS18825;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AB11_RS18825;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 77596 78321 . + . ID=gene-AB11_RS18830;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AB11_RS18830;old_locus_tag=AB11_3554 NZ_JHDH01000145.1 Protein Homology CDS 77596 78321 . + 0 ID=cds-WP_000224099.1;Parent=gene-AB11_RS18830;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AB11_RS18830;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 78369 79802 . + . ID=gene-AB11_RS18835;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AB11_RS18835;old_locus_tag=AB11_3555 NZ_JHDH01000145.1 Protein Homology CDS 78369 79802 . + 0 ID=cds-WP_001469382.1;Parent=gene-AB11_RS18835;Dbxref=GenBank:WP_001469382.1;Name=WP_001469382.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417669.1;locus_tag=AB11_RS18835;product=RNA polymerase factor sigma-54;protein_id=WP_001469382.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 79825 80112 . + . ID=gene-AB11_RS18840;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AB11_RS18840;old_locus_tag=AB11_3556 NZ_JHDH01000145.1 Protein Homology CDS 79825 80112 . + 0 ID=cds-WP_001176599.1;Parent=gene-AB11_RS18840;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AB11_RS18840;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 80230 80721 . + . ID=gene-AB11_RS18845;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AB11_RS18845;old_locus_tag=AB11_3557 NZ_JHDH01000145.1 Protein Homology CDS 80230 80721 . + 0 ID=cds-WP_000183676.1;Parent=gene-AB11_RS18845;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AB11_RS18845;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 80767 81621 . + . ID=gene-AB11_RS18850;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AB11_RS18850;old_locus_tag=AB11_3558 NZ_JHDH01000145.1 Protein Homology CDS 80767 81621 . + 0 ID=cds-WP_000243741.1;Parent=gene-AB11_RS18850;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AB11_RS18850;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 81618 81890 . + . ID=gene-AB11_RS18855;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AB11_RS18855;old_locus_tag=AB11_3559 NZ_JHDH01000145.1 Protein Homology CDS 81618 81890 . + 0 ID=cds-WP_000216791.1;Parent=gene-AB11_RS18855;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AB11_RS18855;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 82104 82736 . + . ID=gene-AB11_RS18860;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AB11_RS18860;old_locus_tag=AB11_3560 NZ_JHDH01000145.1 Protein Homology CDS 82104 82736 . + 0 ID=cds-WP_000620405.1;Parent=gene-AB11_RS18860;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AB11_RS18860;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 82733 83461 . - . ID=gene-AB11_RS18865;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AB11_RS18865;old_locus_tag=AB11_3561 NZ_JHDH01000145.1 Protein Homology CDS 82733 83461 . - 0 ID=cds-WP_000047091.1;Parent=gene-AB11_RS18865;Dbxref=GenBank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AB11_RS18865;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 83458 84111 . - . ID=gene-AB11_RS18870;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AB11_RS18870;old_locus_tag=AB11_3562 NZ_JHDH01000145.1 Protein Homology CDS 83458 84111 . - 0 ID=cds-WP_001300411.1;Parent=gene-AB11_RS18870;Dbxref=GenBank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AB11_RS18870;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 84341 86677 . - . ID=gene-AB11_RS18875;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AB11_RS18875;old_locus_tag=AB11_3563 NZ_JHDH01000145.1 Protein Homology CDS 84341 86677 . - 0 ID=cds-WP_032223868.1;Parent=gene-AB11_RS18875;Dbxref=GenBank:WP_032223868.1;Name=WP_032223868.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AB11_RS18875;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_032223868.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 86773 87702 . - . ID=gene-AB11_RS18880;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AB11_RS18880;old_locus_tag=AB11_3564 NZ_JHDH01000145.1 Protein Homology CDS 86773 87702 . - 0 ID=cds-WP_001299745.1;Parent=gene-AB11_RS18880;Dbxref=GenBank:WP_001299745.1;Name=WP_001299745.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AB11_RS18880;product=TIGR01212 family radical SAM protein;protein_id=WP_001299745.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 88377 92837 . + . ID=gene-AB11_RS18885;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AB11_RS18885;old_locus_tag=AB11_3565 NZ_JHDH01000145.1 Protein Homology CDS 88377 92837 . + 0 ID=cds-WP_032188957.1;Parent=gene-AB11_RS18885;Dbxref=GenBank:WP_032188957.1;Name=WP_032188957.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AB11_RS18885;product=glutamate synthase large subunit;protein_id=WP_032188957.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 92850 94268 . + . ID=gene-AB11_RS18890;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AB11_RS18890;old_locus_tag=AB11_3566 NZ_JHDH01000145.1 Protein Homology CDS 92850 94268 . + 0 ID=cds-WP_000081674.1;Parent=gene-AB11_RS18890;Dbxref=GenBank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AB11_RS18890;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 94828 95592 . + . ID=gene-AB11_RS18895;Name=gltF;gbkey=Gene;gene=gltF;gene_biotype=protein_coding;locus_tag=AB11_RS18895;old_locus_tag=AB11_3567 NZ_JHDH01000145.1 Protein Homology CDS 94828 95592 . + 0 ID=cds-WP_000465371.1;Parent=gene-AB11_RS18895;Dbxref=GenBank:WP_000465371.1;Name=WP_000465371.1;gbkey=CDS;gene=gltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417681.1;locus_tag=AB11_RS18895;product=DUF1120 domain-containing protein;protein_id=WP_000465371.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 95764 96438 . + . ID=gene-AB11_RS18900;Name=yhcA;gbkey=Gene;gene=yhcA;gene_biotype=protein_coding;locus_tag=AB11_RS18900;old_locus_tag=AB11_3568 NZ_JHDH01000145.1 Protein Homology CDS 95764 96438 . + 0 ID=cds-WP_001311157.1;Parent=gene-AB11_RS18900;Dbxref=GenBank:WP_001311157.1;Name=WP_001311157.1;Ontology_term=GO:0006457;gbkey=CDS;gene=yhcA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417682.1;locus_tag=AB11_RS18900;product=fimbria/pilus chaperone family protein;protein_id=WP_001311157.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 96459 98840 . + . ID=gene-AB11_RS18905;Name=yhcD;gbkey=Gene;gene=yhcD;gene_biotype=protein_coding;locus_tag=AB11_RS18905;old_locus_tag=AB11_3569 NZ_JHDH01000145.1 Protein Homology CDS 96459 98840 . + 0 ID=cds-WP_000914994.1;Parent=gene-AB11_RS18905;Dbxref=GenBank:WP_000914994.1;Name=WP_000914994.1;gbkey=CDS;gene=yhcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417683.1;locus_tag=AB11_RS18905;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000914994.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 98837 99382 . + . ID=gene-AB11_RS18910;Name=AB11_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18910;old_locus_tag=AB11_3570 NZ_JHDH01000145.1 Protein Homology CDS 98837 99382 . + 0 ID=cds-WP_000821351.1;Parent=gene-AB11_RS18910;Dbxref=GenBank:WP_000821351.1;Name=WP_000821351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821351.1;locus_tag=AB11_RS18910;product=YhcE family protein;protein_id=WP_000821351.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 99379 100095 . + . ID=gene-AB11_RS18915;Name=yhcF;gbkey=Gene;gene=yhcF;gene_biotype=protein_coding;locus_tag=AB11_RS18915;old_locus_tag=AB11_3571 NZ_JHDH01000145.1 Protein Homology CDS 99379 100095 . + 0 ID=cds-WP_001067008.1;Parent=gene-AB11_RS18915;Dbxref=GenBank:WP_001067008.1;Name=WP_001067008.1;gbkey=CDS;gene=yhcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AB11_RS18915;product=DUF1120 domain-containing protein;protein_id=WP_001067008.1;transl_table=11 NZ_JHDH01000145.1 RefSeq gene 100306 100595 . + . ID=gene-AB11_RS18920;Name=AB11_RS18920;end_range=100595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18920;old_locus_tag=AB11_3572;partial=true NZ_JHDH01000145.1 Protein Homology CDS 100306 100595 . + 0 ID=cds-WP_000567738.1;Parent=gene-AB11_RS18920;Dbxref=GenBank:WP_000567738.1;Name=WP_000567738.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=100595,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB11_RS18920;partial=true;product=transposase;protein_id=WP_000567738.1;transl_table=11 ##sequence-region NZ_JHDH01000146.1 1 59813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000146.1 RefSeq region 1 59813 . + . ID=NZ_JHDH01000146.1:1..59813;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000146.1 RefSeq gene 1 333 . + . ID=gene-AB11_RS18925;Name=AB11_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18925;old_locus_tag=AB11_3573;partial=true;start_range=.,1 NZ_JHDH01000146.1 Protein Homology CDS 1 333 . + 0 ID=cds-WP_024205182.1;Parent=gene-AB11_RS18925;Dbxref=GenBank:WP_024205182.1;Name=WP_024205182.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS18925;partial=true;product=integrase core domain-containing protein;protein_id=WP_024205182.1;start_range=.,1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 415 1542 . + . ID=gene-AB11_RS18930;Name=AB11_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18930;old_locus_tag=AB11_3574 NZ_JHDH01000146.1 Protein Homology CDS 415 1542 . + 0 ID=cds-WP_000445116.1;Parent=gene-AB11_RS18930;Dbxref=GenBank:WP_000445116.1;Name=WP_000445116.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AB11_RS18930;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000445116.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 1602 2066 . - . ID=gene-AB11_RS18935;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AB11_RS18935;old_locus_tag=AB11_3575 NZ_JHDH01000146.1 Protein Homology CDS 1602 2066 . - 0 ID=cds-WP_000979882.1;Parent=gene-AB11_RS18935;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AB11_RS18935;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 2063 2938 . - . ID=gene-AB11_RS18940;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AB11_RS18940;old_locus_tag=AB11_3576 NZ_JHDH01000146.1 Protein Homology CDS 2063 2938 . - 0 ID=cds-WP_032223879.1;Parent=gene-AB11_RS18940;Dbxref=GenBank:WP_032223879.1;Name=WP_032223879.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AB11_RS18940;product=N-acetylmannosamine kinase;protein_id=WP_032223879.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 2935 3624 . - . ID=gene-AB11_RS18945;Name=AB11_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS18945;old_locus_tag=AB11_3577 NZ_JHDH01000146.1 Protein Homology CDS 2935 3624 . - 0 ID=cds-WP_000054239.1;Parent=gene-AB11_RS18945;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AB11_RS18945;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 3672 5162 . - . ID=gene-AB11_RS18950;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AB11_RS18950;old_locus_tag=AB11_3578 NZ_JHDH01000146.1 Protein Homology CDS 3672 5162 . - 0 ID=cds-WP_000108459.1;Parent=gene-AB11_RS18950;Dbxref=GenBank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AB11_RS18950;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 5271 6164 . - . ID=gene-AB11_RS18955;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AB11_RS18955;old_locus_tag=AB11_3579 NZ_JHDH01000146.1 Protein Homology CDS 5271 6164 . - 0 ID=cds-WP_000224714.1;Parent=gene-AB11_RS18955;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AB11_RS18955;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 6286 7077 . - . ID=gene-AB11_RS18960;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AB11_RS18960;old_locus_tag=AB11_3580 NZ_JHDH01000146.1 Protein Homology CDS 6286 7077 . - 0 ID=cds-WP_000523845.1;Parent=gene-AB11_RS18960;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AB11_RS18960;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 7457 8824 . + . ID=gene-AB11_RS18965;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB11_RS18965;old_locus_tag=AB11_3581 NZ_JHDH01000146.1 Protein Homology CDS 7457 8824 . + 0 ID=cds-WP_000467018.1;Parent=gene-AB11_RS18965;Dbxref=GenBank:WP_000467018.1;Name=WP_000467018.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AB11_RS18965;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000467018.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 8867 9364 . - . ID=gene-AB11_RS18970;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AB11_RS18970;old_locus_tag=AB11_3582 NZ_JHDH01000146.1 Protein Homology CDS 8867 9364 . - 0 ID=cds-WP_000366129.1;Parent=gene-AB11_RS18970;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AB11_RS18970;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 9370 10008 . - . ID=gene-AB11_RS18975;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AB11_RS18975;old_locus_tag=AB11_3583 NZ_JHDH01000146.1 Protein Homology CDS 9370 10008 . - 0 ID=cds-WP_000257293.1;Parent=gene-AB11_RS18975;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AB11_RS18975;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 10403 10795 . - . ID=gene-AB11_RS18980;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AB11_RS18980;old_locus_tag=AB11_3584 NZ_JHDH01000146.1 Protein Homology CDS 10403 10795 . - 0 ID=cds-WP_000829818.1;Parent=gene-AB11_RS18980;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AB11_RS18980;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 10811 11239 . - . ID=gene-AB11_RS18985;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AB11_RS18985;old_locus_tag=AB11_3585 NZ_JHDH01000146.1 Protein Homology CDS 10811 11239 . - 0 ID=cds-WP_000847559.1;Parent=gene-AB11_RS18985;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AB11_RS18985;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 11458 12585 . - . ID=gene-AB11_RS18990;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AB11_RS18990;old_locus_tag=AB11_3586 NZ_JHDH01000146.1 Protein Homology CDS 11458 12585 . - 0 ID=cds-WP_001192332.1;Parent=gene-AB11_RS18990;Dbxref=GenBank:WP_001192332.1;Name=WP_001192332.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AB11_RS18990;product=cell division protein ZapE;protein_id=WP_001192332.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 12779 13177 . + . ID=gene-AB11_RS18995;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AB11_RS18995;old_locus_tag=AB11_3587 NZ_JHDH01000146.1 Protein Homology CDS 12779 13177 . + 0 ID=cds-WP_001295270.1;Parent=gene-AB11_RS18995;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AB11_RS18995;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 13331 14698 . + . ID=gene-AB11_RS19000;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AB11_RS19000;old_locus_tag=AB11_3588 NZ_JHDH01000146.1 Protein Homology CDS 13331 14698 . + 0 ID=cds-WP_001295271.1;Parent=gene-AB11_RS19000;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AB11_RS19000;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 14788 15855 . + . ID=gene-AB11_RS19005;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AB11_RS19005;old_locus_tag=AB11_3589 NZ_JHDH01000146.1 Protein Homology CDS 14788 15855 . + 0 ID=cds-WP_000497723.1;Parent=gene-AB11_RS19005;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AB11_RS19005;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 15918 16856 . - . ID=gene-AB11_RS19010;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AB11_RS19010;old_locus_tag=AB11_3590 NZ_JHDH01000146.1 Protein Homology CDS 15918 16856 . - 0 ID=cds-WP_001295272.1;Parent=gene-AB11_RS19010;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AB11_RS19010;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 17291 17761 . + . ID=gene-AB11_RS19015;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AB11_RS19015;old_locus_tag=AB11_3591 NZ_JHDH01000146.1 Protein Homology CDS 17291 17761 . + 0 ID=cds-WP_001257846.1;Parent=gene-AB11_RS19015;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AB11_RS19015;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 18125 18388 . + . ID=gene-AB11_RS19020;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AB11_RS19020;old_locus_tag=AB11_3592 NZ_JHDH01000146.1 Protein Homology CDS 18125 18388 . + 0 ID=cds-WP_000695690.1;Parent=gene-AB11_RS19020;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AB11_RS19020;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 18444 18716 . - . ID=gene-AB11_RS19025;Name=AB11_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19025;old_locus_tag=AB11_3593 NZ_JHDH01000146.1 Protein Homology CDS 18444 18716 . - 0 ID=cds-WP_001029013.1;Parent=gene-AB11_RS19025;Dbxref=GenBank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AB11_RS19025;product=barstar family protein;protein_id=WP_001029013.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 18808 20775 . - . ID=gene-AB11_RS19030;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AB11_RS19030;old_locus_tag=AB11_3594 NZ_JHDH01000146.1 Protein Homology CDS 18808 20775 . - 0 ID=cds-WP_000510966.1;Parent=gene-AB11_RS19030;Dbxref=GenBank:WP_000510966.1;Name=WP_000510966.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417707.1;locus_tag=AB11_RS19030;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510966.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 20781 21713 . - . ID=gene-AB11_RS19035;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AB11_RS19035;old_locus_tag=AB11_3595 NZ_JHDH01000146.1 Protein Homology CDS 20781 21713 . - 0 ID=cds-WP_000854021.1;Parent=gene-AB11_RS19035;Dbxref=GenBank:WP_000854021.1;Name=WP_000854021.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AB11_RS19035;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 21721 21924 . - . ID=gene-AB11_RS19040;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AB11_RS19040;old_locus_tag=AB11_3596 NZ_JHDH01000146.1 Protein Homology CDS 21721 21924 . - 0 ID=cds-WP_000051841.1;Parent=gene-AB11_RS19040;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AB11_RS19040;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 22107 23036 . + . ID=gene-AB11_RS19045;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AB11_RS19045;old_locus_tag=AB11_3597 NZ_JHDH01000146.1 Protein Homology CDS 22107 23036 . + 0 ID=cds-WP_000440317.1;Parent=gene-AB11_RS19045;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AB11_RS19045;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 23170 24615 . - . ID=gene-AB11_RS19050;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AB11_RS19050;old_locus_tag=AB11_3598 NZ_JHDH01000146.1 Protein Homology CDS 23170 24615 . - 0 ID=cds-WP_000055909.1;Parent=gene-AB11_RS19050;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AB11_RS19050;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 25227 29027 . - . ID=gene-AB11_RS19055;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AB11_RS19055;old_locus_tag=AB11_3599 NZ_JHDH01000146.1 Protein Homology CDS 25227 29027 . - 0 ID=cds-WP_001253618.1;Parent=gene-AB11_RS19055;Dbxref=GenBank:WP_001253618.1;Name=WP_001253618.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AB11_RS19055;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253618.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 29095 30564 . - . ID=gene-AB11_RS19060;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AB11_RS19060;old_locus_tag=AB11_3600 NZ_JHDH01000146.1 Protein Homology CDS 29095 30564 . - 0 ID=cds-WP_000123197.1;Parent=gene-AB11_RS19060;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AB11_RS19060;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 30554 31147 . - . ID=gene-AB11_RS19065;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AB11_RS19065;old_locus_tag=AB11_3601 NZ_JHDH01000146.1 Protein Homology CDS 30554 31147 . - 0 ID=cds-WP_000203105.1;Parent=gene-AB11_RS19065;Dbxref=GenBank:WP_000203105.1;Name=WP_000203105.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417714.1;locus_tag=AB11_RS19065;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203105.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 31156 31644 . - . ID=gene-AB11_RS19070;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AB11_RS19070;old_locus_tag=AB11_3602 NZ_JHDH01000146.1 Protein Homology CDS 31156 31644 . - 0 ID=cds-WP_000179409.1;Parent=gene-AB11_RS19070;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AB11_RS19070;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 31644 32747 . - . ID=gene-AB11_RS19075;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AB11_RS19075;old_locus_tag=AB11_3603 NZ_JHDH01000146.1 Protein Homology CDS 31644 32747 . - 0 ID=cds-WP_000802511.1;Parent=gene-AB11_RS19075;Dbxref=GenBank:WP_000802511.1;Name=WP_000802511.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417716.1;locus_tag=AB11_RS19075;product=rod shape-determining protein MreC;protein_id=WP_000802511.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 32813 33856 . - . ID=gene-AB11_RS19080;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AB11_RS19080;old_locus_tag=AB11_3604 NZ_JHDH01000146.1 Protein Homology CDS 32813 33856 . - 0 ID=cds-WP_000913396.1;Parent=gene-AB11_RS19080;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AB11_RS19080;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 34161 36101 . - . ID=gene-AB11_RS19085;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AB11_RS19085;old_locus_tag=AB11_3605 NZ_JHDH01000146.1 Protein Homology CDS 34161 36101 . - 0 ID=cds-WP_001241469.1;Parent=gene-AB11_RS19085;Dbxref=GenBank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AB11_RS19085;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 36253 37227 . + . ID=gene-AB11_RS19090;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=AB11_RS19090;old_locus_tag=AB11_3606 NZ_JHDH01000146.1 Protein Homology CDS 36253 37227 . + 0 ID=cds-WP_001148481.1;Parent=gene-AB11_RS19090;Dbxref=GenBank:WP_001148481.1;Name=WP_001148481.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AB11_RS19090;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148481.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 38205 38675 . + . ID=gene-AB11_RS19095;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AB11_RS19095;old_locus_tag=AB11_3609 NZ_JHDH01000146.1 Protein Homology CDS 38205 38675 . + 0 ID=cds-WP_000354622.1;Parent=gene-AB11_RS19095;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AB11_RS19095;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 38686 40035 . + . ID=gene-AB11_RS19100;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AB11_RS19100;old_locus_tag=AB11_3610 NZ_JHDH01000146.1 Protein Homology CDS 38686 40035 . + 0 ID=cds-WP_000884639.1;Parent=gene-AB11_RS19100;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AB11_RS19100;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 40144 40386 . + . ID=gene-AB11_RS19105;Name=AB11_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19105;old_locus_tag=AB11_3611 NZ_JHDH01000146.1 Protein Homology CDS 40144 40386 . + 0 ID=cds-WP_000381173.1;Parent=gene-AB11_RS19105;Dbxref=GenBank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AB11_RS19105;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 40376 41827 . + . ID=gene-AB11_RS19110;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AB11_RS19110;old_locus_tag=AB11_3612 NZ_JHDH01000146.1 Protein Homology CDS 40376 41827 . + 0 ID=cds-WP_001175728.1;Parent=gene-AB11_RS19110;Dbxref=GenBank:WP_001175728.1;Name=WP_001175728.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AB11_RS19110;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 41839 42720 . + . ID=gene-AB11_RS19115;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AB11_RS19115;old_locus_tag=AB11_3613 NZ_JHDH01000146.1 Protein Homology CDS 41839 42720 . + 0 ID=cds-WP_001145827.1;Parent=gene-AB11_RS19115;Dbxref=GenBank:WP_001145827.1;Name=WP_001145827.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AB11_RS19115;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 43049 44014 . + . ID=gene-AB11_RS19120;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AB11_RS19120;old_locus_tag=AB11_3614 NZ_JHDH01000146.1 Protein Homology CDS 43049 44014 . + 0 ID=cds-WP_001219652.1;Parent=gene-AB11_RS19120;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AB11_RS19120;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 44040 44336 . + . ID=gene-AB11_RS19125;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AB11_RS19125;old_locus_tag=AB11_3615 NZ_JHDH01000146.1 Protein Homology CDS 44040 44336 . + 0 ID=cds-WP_000462905.1;Parent=gene-AB11_RS19125;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AB11_RS19125;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 44422 45306 . + . ID=gene-AB11_RS19130;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AB11_RS19130;old_locus_tag=AB11_3616 NZ_JHDH01000146.1 Protein Homology CDS 44422 45306 . + 0 ID=cds-WP_001258900.1;Parent=gene-AB11_RS19130;Dbxref=GenBank:WP_001258900.1;Name=WP_001258900.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417728.4;locus_tag=AB11_RS19130;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258900.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 45390 45569 . + . ID=gene-AB11_RS19135;Name=AB11_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19135 NZ_JHDH01000146.1 Protein Homology CDS 45390 45569 . + 0 ID=cds-WP_021570962.1;Parent=gene-AB11_RS19135;Dbxref=GenBank:WP_021570962.1;Name=WP_021570962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AB11_RS19135;product=DUF2556 family protein;protein_id=WP_021570962.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 45572 46234 . - . ID=gene-AB11_RS19140;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AB11_RS19140;old_locus_tag=AB11_3618 NZ_JHDH01000146.1 Protein Homology CDS 45572 46234 . - 0 ID=cds-WP_001556266.1;Parent=gene-AB11_RS19140;Dbxref=GenBank:WP_001556266.1;Name=WP_001556266.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AB11_RS19140;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001556266.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 46633 47790 . + . ID=gene-AB11_RS19145;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AB11_RS19145;old_locus_tag=AB11_3619 NZ_JHDH01000146.1 Protein Homology CDS 46633 47790 . + 0 ID=cds-WP_000160334.1;Parent=gene-AB11_RS19145;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AB11_RS19145;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 47802 50906 . + . ID=gene-AB11_RS19150;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AB11_RS19150;old_locus_tag=AB11_3620 NZ_JHDH01000146.1 Protein Homology CDS 47802 50906 . + 0 ID=cds-WP_001273221.1;Parent=gene-AB11_RS19150;Dbxref=GenBank:WP_001273221.1;Name=WP_001273221.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AB11_RS19150;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_001273221.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 51159 51380 . + . ID=gene-AB11_RS19155;Name=AB11_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19155;old_locus_tag=AB11_3621 NZ_JHDH01000146.1 Protein Homology CDS 51159 51380 . + 0 ID=cds-WP_000825639.1;Parent=gene-AB11_RS19155;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AB11_RS19155;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 51811 52836 . + . ID=gene-AB11_RS19160;Name=AB11_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19160;old_locus_tag=AB11_3623 NZ_JHDH01000146.1 Protein Homology CDS 51811 52836 . + 0 ID=cds-WP_000738568.1;Parent=gene-AB11_RS19160;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AB11_RS19160;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 52904 54085 . + . ID=gene-AB11_RS19165;Name=AB11_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19165;old_locus_tag=AB11_3624 NZ_JHDH01000146.1 Protein Homology CDS 52904 54085 . + 0 ID=cds-WP_000019655.1;Parent=gene-AB11_RS19165;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AB11_RS19165;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 54095 55198 . + . ID=gene-AB11_RS19170;Name=AB11_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19170;old_locus_tag=AB11_3625 NZ_JHDH01000146.1 Protein Homology CDS 54095 55198 . + 0 ID=cds-WP_001300681.1;Parent=gene-AB11_RS19170;Dbxref=GenBank:WP_001300681.1;Name=WP_001300681.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AB11_RS19170;product=amino acid ABC transporter permease;protein_id=WP_001300681.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 55206 55964 . + . ID=gene-AB11_RS19175;Name=AB11_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19175;old_locus_tag=AB11_3626 NZ_JHDH01000146.1 Protein Homology CDS 55206 55964 . + 0 ID=cds-WP_000078349.1;Parent=gene-AB11_RS19175;Dbxref=GenBank:WP_000078349.1;Name=WP_000078349.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AB11_RS19175;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11 NZ_JHDH01000146.1 RefSeq gene 56195 56310 . - . ID=gene-AB11_RS19180;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS19180;old_locus_tag=AB11_3627 NZ_JHDH01000146.1 cmsearch rRNA 56195 56310 . - . ID=rna-AB11_RS19180;Parent=gene-AB11_RS19180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19180;product=5S ribosomal RNA NZ_JHDH01000146.1 cmsearch exon 56195 56310 . - . ID=exon-AB11_RS19180-1;Parent=rna-AB11_RS19180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19180;product=5S ribosomal RNA NZ_JHDH01000146.1 RefSeq gene 56350 56425 . - . ID=gene-AB11_RS19185;Name=AB11_RS19185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS19185;old_locus_tag=AB11_3628 NZ_JHDH01000146.1 tRNAscan-SE tRNA 56350 56425 . - . ID=rna-AB11_RS19185;Parent=gene-AB11_RS19185;anticodon=(pos:complement(56390..56392));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19185;product=tRNA-Thr NZ_JHDH01000146.1 tRNAscan-SE exon 56350 56425 . - . ID=exon-AB11_RS19185-1;Parent=rna-AB11_RS19185;anticodon=(pos:complement(56390..56392));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19185;product=tRNA-Thr NZ_JHDH01000146.1 RefSeq gene 56440 56555 . - . ID=gene-AB11_RS19190;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS19190;old_locus_tag=AB11_3629 NZ_JHDH01000146.1 cmsearch rRNA 56440 56555 . - . ID=rna-AB11_RS19190;Parent=gene-AB11_RS19190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19190;product=5S ribosomal RNA NZ_JHDH01000146.1 cmsearch exon 56440 56555 . - . ID=exon-AB11_RS19190-1;Parent=rna-AB11_RS19190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19190;product=5S ribosomal RNA NZ_JHDH01000146.1 RefSeq gene 56595 56670 . - . ID=gene-AB11_RS19195;Name=AB11_RS19195;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS19195;old_locus_tag=AB11_3630 NZ_JHDH01000146.1 tRNAscan-SE tRNA 56595 56670 . - . ID=rna-AB11_RS19195;Parent=gene-AB11_RS19195;anticodon=(pos:complement(56635..56637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19195;product=tRNA-Thr NZ_JHDH01000146.1 tRNAscan-SE exon 56595 56670 . - . ID=exon-AB11_RS19195-1;Parent=rna-AB11_RS19195;anticodon=(pos:complement(56635..56637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19195;product=tRNA-Thr NZ_JHDH01000146.1 RefSeq gene 56685 56800 . - . ID=gene-AB11_RS19200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS19200;old_locus_tag=AB11_3631 NZ_JHDH01000146.1 cmsearch rRNA 56685 56800 . - . ID=rna-AB11_RS19200;Parent=gene-AB11_RS19200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19200;product=5S ribosomal RNA NZ_JHDH01000146.1 cmsearch exon 56685 56800 . - . ID=exon-AB11_RS19200-1;Parent=rna-AB11_RS19200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19200;product=5S ribosomal RNA NZ_JHDH01000146.1 RefSeq gene 56895 59797 . - . ID=gene-AB11_RS19205;Name=AB11_RS19205;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS19205;old_locus_tag=AB11_3633 NZ_JHDH01000146.1 cmsearch rRNA 56895 59797 . - . ID=rna-AB11_RS19205;Parent=gene-AB11_RS19205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19205;product=23S ribosomal RNA NZ_JHDH01000146.1 cmsearch exon 56895 59797 . - . ID=exon-AB11_RS19205-1;Parent=rna-AB11_RS19205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19205;product=23S ribosomal RNA ##sequence-region NZ_JHDH01000147.1 1 3338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000147.1 RefSeq region 1 3338 . + . ID=NZ_JHDH01000147.1:1..3338;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000147.1 RefSeq gene 1 2769 . - . ID=gene-AB11_RS19210;Name=AB11_RS19210;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS19210;partial=true;start_range=.,1 NZ_JHDH01000147.1 cmsearch rRNA 1 2769 . - . ID=rna-AB11_RS19210;Parent=gene-AB11_RS19210;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19210;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000147.1 cmsearch exon 1 2769 . - . ID=exon-AB11_RS19210-1;Parent=rna-AB11_RS19210;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19210;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000147.1 RefSeq gene 2944 3019 . - . ID=gene-AB11_RS19215;Name=AB11_RS19215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS19215;old_locus_tag=AB11_3637 NZ_JHDH01000147.1 tRNAscan-SE tRNA 2944 3019 . - . ID=rna-AB11_RS19215;Parent=gene-AB11_RS19215;anticodon=(pos:complement(2984..2986));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19215;product=tRNA-Ala NZ_JHDH01000147.1 tRNAscan-SE exon 2944 3019 . - . ID=exon-AB11_RS19215-1;Parent=rna-AB11_RS19215;anticodon=(pos:complement(2984..2986));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19215;product=tRNA-Ala NZ_JHDH01000147.1 RefSeq gene 3062 3138 . - . ID=gene-AB11_RS19220;Name=AB11_RS19220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS19220;old_locus_tag=AB11_3638 NZ_JHDH01000147.1 tRNAscan-SE tRNA 3062 3138 . - . ID=rna-AB11_RS19220;Parent=gene-AB11_RS19220;anticodon=(pos:complement(3102..3104));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19220;product=tRNA-Ile NZ_JHDH01000147.1 tRNAscan-SE exon 3062 3138 . - . ID=exon-AB11_RS19220-1;Parent=rna-AB11_RS19220;anticodon=(pos:complement(3102..3104));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS19220;product=tRNA-Ile NZ_JHDH01000147.1 RefSeq gene 3207 3338 . - . ID=gene-AB11_RS19225;Name=AB11_RS19225;end_range=3338,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS19225;old_locus_tag=AB11_3639;partial=true NZ_JHDH01000147.1 cmsearch rRNA 3207 3338 . - . ID=rna-AB11_RS19225;Parent=gene-AB11_RS19225;Dbxref=RFAM:RF00177;end_range=3338,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19225;partial=true;product=16S ribosomal RNA NZ_JHDH01000147.1 cmsearch exon 3207 3338 . - . ID=exon-AB11_RS19225-1;Parent=rna-AB11_RS19225;Dbxref=RFAM:RF00177;end_range=3338,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19225;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000148.1 1 34769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000148.1 RefSeq region 1 34769 . + . ID=NZ_JHDH01000148.1:1..34769;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000148.1 RefSeq gene 1 1310 . - . ID=gene-AB11_RS19230;Name=AB11_RS19230;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS19230;partial=true;start_range=.,1 NZ_JHDH01000148.1 cmsearch rRNA 1 1310 . - . ID=rna-AB11_RS19230;Parent=gene-AB11_RS19230;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19230;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000148.1 cmsearch exon 1 1310 . - . ID=exon-AB11_RS19230-1;Parent=rna-AB11_RS19230;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19230;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000148.1 RefSeq gene 1784 2338 . + . ID=gene-AB11_RS19235;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=AB11_RS19235;old_locus_tag=AB11_3640 NZ_JHDH01000148.1 Protein Homology CDS 1784 2338 . + 0 ID=cds-WP_001286216.1;Parent=gene-AB11_RS19235;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yrdA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AB11_RS19235;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 2314 2571 . - . ID=gene-AB11_RS19240;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=AB11_RS19240;old_locus_tag=AB11_3641 NZ_JHDH01000148.1 Protein Homology CDS 2314 2571 . - 0 ID=cds-WP_001070563.1;Parent=gene-AB11_RS19240;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;gene=yrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AB11_RS19240;product=DUF1488 family protein;protein_id=WP_001070563.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 2568 3386 . - . ID=gene-AB11_RS19245;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AB11_RS19245;old_locus_tag=AB11_3642 NZ_JHDH01000148.1 Protein Homology CDS 2568 3386 . - 0 ID=cds-WP_000451243.1;Parent=gene-AB11_RS19245;Dbxref=GenBank:WP_000451243.1;Name=WP_000451243.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AB11_RS19245;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 3391 3963 . - . ID=gene-AB11_RS19250;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AB11_RS19250;old_locus_tag=AB11_3643 NZ_JHDH01000148.1 Protein Homology CDS 3391 3963 . - 0 ID=cds-WP_001301412.1;Parent=gene-AB11_RS19250;Dbxref=GenBank:WP_001301412.1;Name=WP_001301412.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AB11_RS19250;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301412.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 3968 4510 . - . ID=gene-AB11_RS19255;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=AB11_RS19255 NZ_JHDH01000148.1 Protein Homology CDS 3968 4510 . - 0 ID=cds-WP_001129722.1;Parent=gene-AB11_RS19255;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;gene=yrdD;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AB11_RS19255;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 4539 5012 . - . ID=gene-AB11_RS19260;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AB11_RS19260;old_locus_tag=AB11_3645 NZ_JHDH01000148.1 Protein Homology CDS 4539 5012 . - 0 ID=cds-WP_000460680.1;Parent=gene-AB11_RS19260;Dbxref=GenBank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AB11_RS19260;product=DUF494 family protein Smg;protein_id=WP_000460680.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 4984 6108 . - . ID=gene-AB11_RS19265;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AB11_RS19265;old_locus_tag=AB11_3646 NZ_JHDH01000148.1 Protein Homology CDS 4984 6108 . - 0 ID=cds-WP_000228551.1;Parent=gene-AB11_RS19265;Dbxref=GenBank:WP_000228551.1;Name=WP_000228551.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AB11_RS19265;product=DNA-protecting protein DprA;protein_id=WP_000228551.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 6238 6747 . + . ID=gene-AB11_RS19270;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AB11_RS19270;old_locus_tag=AB11_3647 NZ_JHDH01000148.1 Protein Homology CDS 6238 6747 . + 0 ID=cds-WP_000114984.1;Parent=gene-AB11_RS19270;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AB11_RS19270;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 6762 7709 . + . ID=gene-AB11_RS19275;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AB11_RS19275;old_locus_tag=AB11_3648 NZ_JHDH01000148.1 Protein Homology CDS 6762 7709 . + 0 ID=cds-WP_000004473.1;Parent=gene-AB11_RS19275;Dbxref=GenBank:WP_000004473.1;Name=WP_000004473.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AB11_RS19275;product=methionyl-tRNA formyltransferase;protein_id=WP_000004473.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 7755 9044 . + . ID=gene-AB11_RS19280;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AB11_RS19280;old_locus_tag=AB11_3649 NZ_JHDH01000148.1 Protein Homology CDS 7755 9044 . + 0 ID=cds-WP_000744778.1;Parent=gene-AB11_RS19280;Dbxref=GenBank:WP_000744778.1;Name=WP_000744778.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AB11_RS19280;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744778.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 9066 10442 . + . ID=gene-AB11_RS19285;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AB11_RS19285;old_locus_tag=AB11_3650 NZ_JHDH01000148.1 Protein Homology CDS 9066 10442 . + 0 ID=cds-WP_000691382.1;Parent=gene-AB11_RS19285;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AB11_RS19285;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 10572 10982 . + . ID=gene-AB11_RS19290;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AB11_RS19290;old_locus_tag=AB11_3651 NZ_JHDH01000148.1 Protein Homology CDS 10572 10982 . + 0 ID=cds-WP_000022442.1;Parent=gene-AB11_RS19290;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AB11_RS19290;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 10979 11197 . - . ID=gene-AB11_RS19295;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AB11_RS19295 NZ_JHDH01000148.1 Protein Homology CDS 10979 11197 . - 0 ID=cds-WP_000092696.1;Parent=gene-AB11_RS19295;Dbxref=GenBank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AB11_RS19295;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 11253 11678 . - . ID=gene-AB11_RS19300;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AB11_RS19300;old_locus_tag=AB11_3652 NZ_JHDH01000148.1 Protein Homology CDS 11253 11678 . - 0 ID=cds-WP_000285607.1;Parent=gene-AB11_RS19300;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AB11_RS19300;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 11689 12057 . - . ID=gene-AB11_RS19305;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=AB11_RS19305;old_locus_tag=AB11_3653 NZ_JHDH01000148.1 Protein Homology CDS 11689 12057 . - 0 ID=cds-WP_000266486.1;Parent=gene-AB11_RS19305;Dbxref=GenBank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;gene=yhdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AB11_RS19305;product=DnaJ family domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 12164 12547 . - . ID=gene-AB11_RS19310;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AB11_RS19310;old_locus_tag=AB11_3654 NZ_JHDH01000148.1 Protein Homology CDS 12164 12547 . - 0 ID=cds-WP_001216368.1;Parent=gene-AB11_RS19310;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AB11_RS19310;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 12588 13577 . - . ID=gene-AB11_RS19315;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AB11_RS19315;old_locus_tag=AB11_3655 NZ_JHDH01000148.1 Protein Homology CDS 12588 13577 . - 0 ID=cds-WP_001162094.1;Parent=gene-AB11_RS19315;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AB11_RS19315;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 13603 14223 . - . ID=gene-AB11_RS19320;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AB11_RS19320;old_locus_tag=AB11_3656 NZ_JHDH01000148.1 Protein Homology CDS 13603 14223 . - 0 ID=cds-WP_000135224.1;Parent=gene-AB11_RS19320;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AB11_RS19320;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 14257 14646 . - . ID=gene-AB11_RS19325;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AB11_RS19325;old_locus_tag=AB11_3657 NZ_JHDH01000148.1 Protein Homology CDS 14257 14646 . - 0 ID=cds-WP_001029684.1;Parent=gene-AB11_RS19325;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AB11_RS19325;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 14663 15019 . - . ID=gene-AB11_RS19330;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AB11_RS19330;old_locus_tag=AB11_3658 NZ_JHDH01000148.1 Protein Homology CDS 14663 15019 . - 0 ID=cds-WP_000090775.1;Parent=gene-AB11_RS19330;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AB11_RS19330;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 15166 15282 . - . ID=gene-AB11_RS19335;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AB11_RS19335;old_locus_tag=AB11_3659 NZ_JHDH01000148.1 Protein Homology CDS 15166 15282 . - 0 ID=cds-WP_000868187.1;Parent=gene-AB11_RS19335;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AB11_RS19335;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 15314 16645 . - . ID=gene-AB11_RS19340;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AB11_RS19340;old_locus_tag=AB11_3660 NZ_JHDH01000148.1 Protein Homology CDS 15314 16645 . - 0 ID=cds-WP_001118861.1;Parent=gene-AB11_RS19340;Dbxref=GenBank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AB11_RS19340;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 16653 17087 . - . ID=gene-AB11_RS19345;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AB11_RS19345;old_locus_tag=AB11_3661 NZ_JHDH01000148.1 Protein Homology CDS 16653 17087 . - 0 ID=cds-WP_001238914.1;Parent=gene-AB11_RS19345;Dbxref=GenBank:WP_001238914.1;Name=WP_001238914.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AB11_RS19345;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 17091 17270 . - . ID=gene-AB11_RS19350;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AB11_RS19350;old_locus_tag=AB11_3662 NZ_JHDH01000148.1 Protein Homology CDS 17091 17270 . - 0 ID=cds-WP_001140433.1;Parent=gene-AB11_RS19350;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AB11_RS19350;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 17274 17777 . - . ID=gene-AB11_RS19355;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AB11_RS19355;old_locus_tag=AB11_3663 NZ_JHDH01000148.1 Protein Homology CDS 17274 17777 . - 0 ID=cds-WP_000940121.1;Parent=gene-AB11_RS19355;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AB11_RS19355;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 17792 18145 . - . ID=gene-AB11_RS19360;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AB11_RS19360;old_locus_tag=AB11_3664 NZ_JHDH01000148.1 Protein Homology CDS 17792 18145 . - 0 ID=cds-WP_000358960.1;Parent=gene-AB11_RS19360;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AB11_RS19360;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 18155 18688 . - . ID=gene-AB11_RS19365;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AB11_RS19365;old_locus_tag=AB11_3665 NZ_JHDH01000148.1 Protein Homology CDS 18155 18688 . - 0 ID=cds-WP_000091945.1;Parent=gene-AB11_RS19365;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AB11_RS19365;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 18701 19093 . - . ID=gene-AB11_RS19370;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AB11_RS19370;old_locus_tag=AB11_3666 NZ_JHDH01000148.1 Protein Homology CDS 18701 19093 . - 0 ID=cds-WP_000062611.1;Parent=gene-AB11_RS19370;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AB11_RS19370;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 19127 19432 . - . ID=gene-AB11_RS19375;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AB11_RS19375;old_locus_tag=AB11_3667 NZ_JHDH01000148.1 Protein Homology CDS 19127 19432 . - 0 ID=cds-WP_001118930.1;Parent=gene-AB11_RS19375;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AB11_RS19375;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 19447 19986 . - . ID=gene-AB11_RS19380;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AB11_RS19380;old_locus_tag=AB11_3668 NZ_JHDH01000148.1 Protein Homology CDS 19447 19986 . - 0 ID=cds-WP_001096200.1;Parent=gene-AB11_RS19380;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AB11_RS19380;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 20001 20315 . - . ID=gene-AB11_RS19385;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AB11_RS19385;old_locus_tag=AB11_3669 NZ_JHDH01000148.1 Protein Homology CDS 20001 20315 . - 0 ID=cds-WP_000729185.1;Parent=gene-AB11_RS19385;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AB11_RS19385;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 20326 20697 . - . ID=gene-AB11_RS19390;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AB11_RS19390;old_locus_tag=AB11_3670 NZ_JHDH01000148.1 Protein Homology CDS 20326 20697 . - 0 ID=cds-WP_000613955.1;Parent=gene-AB11_RS19390;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AB11_RS19390;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 20862 21116 . - . ID=gene-AB11_RS19395;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AB11_RS19395;old_locus_tag=AB11_3671 NZ_JHDH01000148.1 Protein Homology CDS 20862 21116 . - 0 ID=cds-WP_000130100.1;Parent=gene-AB11_RS19395;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AB11_RS19395;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 21116 21307 . - . ID=gene-AB11_RS19400;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AB11_RS19400;old_locus_tag=AB11_3672 NZ_JHDH01000148.1 Protein Homology CDS 21116 21307 . - 0 ID=cds-WP_000644741.1;Parent=gene-AB11_RS19400;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AB11_RS19400;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 21307 21717 . - . ID=gene-AB11_RS19405;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AB11_RS19405;old_locus_tag=AB11_3673 NZ_JHDH01000148.1 Protein Homology CDS 21307 21717 . - 0 ID=cds-WP_000941212.1;Parent=gene-AB11_RS19405;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AB11_RS19405;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 21730 22431 . - . ID=gene-AB11_RS19410;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AB11_RS19410;old_locus_tag=AB11_3674 NZ_JHDH01000148.1 Protein Homology CDS 21730 22431 . - 0 ID=cds-WP_000529945.1;Parent=gene-AB11_RS19410;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AB11_RS19410;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 22449 22781 . - . ID=gene-AB11_RS19415;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AB11_RS19415;old_locus_tag=AB11_3675 NZ_JHDH01000148.1 Protein Homology CDS 22449 22781 . - 0 ID=cds-WP_000447529.1;Parent=gene-AB11_RS19415;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AB11_RS19415;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 22796 23074 . - . ID=gene-AB11_RS19420;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AB11_RS19420 NZ_JHDH01000148.1 Protein Homology CDS 22796 23074 . - 0 ID=cds-WP_001138117.1;Parent=gene-AB11_RS19420;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AB11_RS19420;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 23091 23912 . - . ID=gene-AB11_RS19425;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AB11_RS19425;old_locus_tag=AB11_3677 NZ_JHDH01000148.1 Protein Homology CDS 23091 23912 . - 0 ID=cds-WP_001404507.1;Parent=gene-AB11_RS19425;Dbxref=GenBank:WP_001404507.1;Name=WP_001404507.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AB11_RS19425;product=50S ribosomal protein L2;protein_id=WP_001404507.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 23930 24232 . - . ID=gene-AB11_RS19430;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AB11_RS19430;old_locus_tag=AB11_3678 NZ_JHDH01000148.1 Protein Homology CDS 23930 24232 . - 0 ID=cds-WP_000617544.1;Parent=gene-AB11_RS19430;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AB11_RS19430;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 24229 24834 . - . ID=gene-AB11_RS19435;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AB11_RS19435;old_locus_tag=AB11_3679 NZ_JHDH01000148.1 Protein Homology CDS 24229 24834 . - 0 ID=cds-WP_000424395.1;Parent=gene-AB11_RS19435;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AB11_RS19435;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 24845 25474 . - . ID=gene-AB11_RS19440;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AB11_RS19440;old_locus_tag=AB11_3680 NZ_JHDH01000148.1 Protein Homology CDS 24845 25474 . - 0 ID=cds-WP_000579833.1;Parent=gene-AB11_RS19440;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AB11_RS19440;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 25507 25818 . - . ID=gene-AB11_RS19445;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AB11_RS19445;old_locus_tag=AB11_3681 NZ_JHDH01000148.1 Protein Homology CDS 25507 25818 . - 0 ID=cds-WP_001181004.1;Parent=gene-AB11_RS19445;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AB11_RS19445;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 26056 26475 . - . ID=gene-AB11_RS19450;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AB11_RS19450;old_locus_tag=AB11_3682 NZ_JHDH01000148.1 Protein Homology CDS 26056 26475 . - 0 ID=cds-WP_000461450.1;Parent=gene-AB11_RS19450;Dbxref=GenBank:WP_000461450.1;Name=WP_000461450.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AB11_RS19450;product=putative general secretion pathway protein GspB;protein_id=WP_000461450.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 26477 27946 . - . ID=gene-AB11_RS19455;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AB11_RS19455;old_locus_tag=AB11_3683 NZ_JHDH01000148.1 Protein Homology CDS 26477 27946 . - 0 ID=cds-WP_000107576.1;Parent=gene-AB11_RS19455;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AB11_RS19455;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 28126 28941 . + . ID=gene-AB11_RS19460;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AB11_RS19460;old_locus_tag=AB11_3684 NZ_JHDH01000148.1 Protein Homology CDS 28126 28941 . + 0 ID=cds-WP_001142708.1;Parent=gene-AB11_RS19460;Dbxref=GenBank:WP_001142708.1;Name=WP_001142708.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AB11_RS19460;product=type II secretion system protein GspC;protein_id=WP_001142708.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 28925 30877 . + . ID=gene-AB11_RS19465;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AB11_RS19465;old_locus_tag=AB11_3685 NZ_JHDH01000148.1 Protein Homology CDS 28925 30877 . + 0 ID=cds-WP_001326512.1;Parent=gene-AB11_RS19465;Dbxref=GenBank:WP_001326512.1;Name=WP_001326512.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AB11_RS19465;product=type II secretion system secretin GspD;protein_id=WP_001326512.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 30887 32368 . + . ID=gene-AB11_RS19470;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB11_RS19470;old_locus_tag=AB11_3686 NZ_JHDH01000148.1 Protein Homology CDS 30887 32368 . + 0 ID=cds-WP_032174586.1;Parent=gene-AB11_RS19470;Dbxref=GenBank:WP_032174586.1;Name=WP_032174586.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AB11_RS19470;product=type II secretion system ATPase GspE;protein_id=WP_032174586.1;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 32365 33561 . + . ID=gene-AB11_RS19475;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AB11_RS19475;old_locus_tag=AB11_3687 NZ_JHDH01000148.1 Protein Homology CDS 32365 33561 . + 0 ID=cds-WP_032223887.1;Parent=gene-AB11_RS19475;Dbxref=GenBank:WP_032223887.1;Name=WP_032223887.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AB11_RS19475;product=type II secretion system inner membrane protein GspF;protein_id=WP_032223887.1;transl_table=11 NZ_JHDH01000148.1 RefSeq pseudogene 33571 33681 . + . ID=gene-AB11_RS19480;Name=AB11_RS19480;end_range=33681,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS19480;partial=true;pseudo=true NZ_JHDH01000148.1 Protein Homology CDS 33571 33681 . + 0 ID=cds-AB11_RS19480;Parent=gene-AB11_RS19480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33681,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AB11_RS19480;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000148.1 RefSeq gene 33812 34769 . - . ID=gene-AB11_RS19485;Name=AB11_RS19485;end_range=34769,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS19485;old_locus_tag=AB11_3689;partial=true NZ_JHDH01000148.1 Protein Homology CDS 33812 34769 . - 1 ID=cds-WP_032222538.1-5;Parent=gene-AB11_RS19485;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;end_range=34769,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS19485;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;transl_table=11 ##sequence-region NZ_JHDH01000149.1 1 145069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000149.1 RefSeq region 1 145069 . + . ID=NZ_JHDH01000149.1:1..145069;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000149.1 RefSeq gene 1 1310 . - . ID=gene-AB11_RS19490;Name=AB11_RS19490;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS19490;partial=true;start_range=.,1 NZ_JHDH01000149.1 cmsearch rRNA 1 1310 . - . ID=rna-AB11_RS19490;Parent=gene-AB11_RS19490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19490;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000149.1 cmsearch exon 1 1310 . - . ID=exon-AB11_RS19490-1;Parent=rna-AB11_RS19490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS19490;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000149.1 RefSeq gene 1925 3514 . + . ID=gene-AB11_RS19495;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AB11_RS19495;old_locus_tag=AB11_3692 NZ_JHDH01000149.1 Protein Homology CDS 1925 3514 . + 0 ID=cds-WP_021571014.1;Parent=gene-AB11_RS19495;Dbxref=GenBank:WP_021571014.1;Name=WP_021571014.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AB11_RS19495;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_021571014.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 3526 4815 . + . ID=gene-AB11_RS19500;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AB11_RS19500;old_locus_tag=AB11_3693 NZ_JHDH01000149.1 Protein Homology CDS 3526 4815 . + 0 ID=cds-WP_000866800.1;Parent=gene-AB11_RS19500;Dbxref=GenBank:WP_000866800.1;Name=WP_000866800.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AB11_RS19500;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866800.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 4812 6137 . - . ID=gene-AB11_RS19505;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AB11_RS19505;old_locus_tag=AB11_3694 NZ_JHDH01000149.1 Protein Homology CDS 4812 6137 . - 0 ID=cds-WP_000148503.1;Parent=gene-AB11_RS19505;Dbxref=GenBank:WP_000148503.1;Name=WP_000148503.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AB11_RS19505;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148503.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 6134 7531 . - . ID=gene-AB11_RS19510;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AB11_RS19510;old_locus_tag=AB11_3695 NZ_JHDH01000149.1 Protein Homology CDS 6134 7531 . - 0 ID=cds-WP_001211892.1;Parent=gene-AB11_RS19510;Dbxref=GenBank:WP_001211892.1;Name=WP_001211892.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418431.1;locus_tag=AB11_RS19510;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211892.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 7769 8194 . + . ID=gene-AB11_RS19515;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AB11_RS19515;old_locus_tag=AB11_3697 NZ_JHDH01000149.1 Protein Homology CDS 7769 8194 . + 0 ID=cds-WP_000828222.1;Parent=gene-AB11_RS19515;Dbxref=GenBank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AB11_RS19515;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 8196 8891 . - . ID=gene-AB11_RS19520;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AB11_RS19520;old_locus_tag=AB11_3698 NZ_JHDH01000149.1 Protein Homology CDS 8196 8891 . - 0 ID=cds-WP_001084037.1;Parent=gene-AB11_RS19520;Dbxref=GenBank:WP_001084037.1;Name=WP_001084037.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418429.1;locus_tag=AB11_RS19520;product=DUF1481 domain-containing protein;protein_id=WP_001084037.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 8904 9176 . - . ID=gene-AB11_RS19525;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AB11_RS19525;old_locus_tag=AB11_3699 NZ_JHDH01000149.1 Protein Homology CDS 8904 9176 . - 0 ID=cds-WP_001044513.1;Parent=gene-AB11_RS19525;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AB11_RS19525;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 9363 9953 . - . ID=gene-AB11_RS19530;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AB11_RS19530;old_locus_tag=AB11_3700 NZ_JHDH01000149.1 Protein Homology CDS 9363 9953 . - 0 ID=cds-WP_000940106.1;Parent=gene-AB11_RS19530;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AB11_RS19530;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 9996 10667 . - . ID=gene-AB11_RS19535;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AB11_RS19535;old_locus_tag=AB11_3701 NZ_JHDH01000149.1 Protein Homology CDS 9996 10667 . - 0 ID=cds-WP_032223896.1;Parent=gene-AB11_RS19535;Dbxref=GenBank:WP_032223896.1;Name=WP_032223896.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AB11_RS19535;product=deoxyribonuclease V;protein_id=WP_032223896.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 10677 11741 . - . ID=gene-AB11_RS19540;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AB11_RS19540;old_locus_tag=AB11_3702 NZ_JHDH01000149.1 Protein Homology CDS 10677 11741 . - 0 ID=cds-WP_000137657.1;Parent=gene-AB11_RS19540;Dbxref=GenBank:WP_000137657.1;Name=WP_000137657.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AB11_RS19540;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 11781 12554 . - . ID=gene-AB11_RS19545;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AB11_RS19545;old_locus_tag=AB11_3703 NZ_JHDH01000149.1 Protein Homology CDS 11781 12554 . - 0 ID=cds-WP_000373940.1;Parent=gene-AB11_RS19545;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AB11_RS19545;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 12649 13125 . + . ID=gene-AB11_RS19550;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AB11_RS19550;old_locus_tag=AB11_3704 NZ_JHDH01000149.1 Protein Homology CDS 12649 13125 . + 0 ID=cds-WP_000934302.1;Parent=gene-AB11_RS19550;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AB11_RS19550;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JHDH01000149.1 cmsearch riboswitch 13178 13278 . + . ID=id-NZ_JHDH01000149.1:13178..13278;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000149.1 RefSeq gene 13359 15254 . + . ID=gene-AB11_RS19555;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AB11_RS19555;old_locus_tag=AB11_3705 NZ_JHDH01000149.1 Protein Homology CDS 13359 15254 . + 0 ID=cds-WP_032176779.1;Parent=gene-AB11_RS19555;Dbxref=GenBank:WP_032176779.1;Name=WP_032176779.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=AB11_RS19555;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032176779.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 15254 15889 . + . ID=gene-AB11_RS19560;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AB11_RS19560;old_locus_tag=AB11_3706 NZ_JHDH01000149.1 Protein Homology CDS 15254 15889 . + 0 ID=cds-WP_000284601.1;Parent=gene-AB11_RS19560;Dbxref=GenBank:WP_000284601.1;Name=WP_000284601.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709787.2;locus_tag=AB11_RS19560;product=thiamine phosphate synthase;protein_id=WP_000284601.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 15882 16637 . + . ID=gene-AB11_RS19565;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AB11_RS19565;old_locus_tag=AB11_3707 NZ_JHDH01000149.1 Protein Homology CDS 15882 16637 . + 0 ID=cds-WP_000999737.1;Parent=gene-AB11_RS19565;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AB11_RS19565;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 16621 16821 . + . ID=gene-AB11_RS19570;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AB11_RS19570;old_locus_tag=AB11_3708 NZ_JHDH01000149.1 Protein Homology CDS 16621 16821 . + 0 ID=cds-WP_001166226.1;Parent=gene-AB11_RS19570;Dbxref=GenBank:WP_001166226.1;Name=WP_001166226.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AB11_RS19570;product=sulfur carrier protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 16823 17593 . + . ID=gene-AB11_RS19575;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AB11_RS19575;old_locus_tag=AB11_3709 NZ_JHDH01000149.1 Protein Homology CDS 16823 17593 . + 0 ID=cds-WP_000944104.1;Parent=gene-AB11_RS19575;Dbxref=GenBank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AB11_RS19575;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 17590 18723 . + . ID=gene-AB11_RS19580;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AB11_RS19580;old_locus_tag=AB11_3710 NZ_JHDH01000149.1 Protein Homology CDS 17590 18723 . + 0 ID=cds-WP_000847447.1;Parent=gene-AB11_RS19580;Dbxref=GenBank:WP_000847447.1;Name=WP_000847447.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AB11_RS19580;product=2-iminoacetate synthase ThiH;protein_id=WP_000847447.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 19133 19672 . - . ID=gene-AB11_RS19585;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AB11_RS19585;old_locus_tag=AB11_3711 NZ_JHDH01000149.1 Protein Homology CDS 19133 19672 . - 0 ID=cds-WP_001307500.1;Parent=gene-AB11_RS19585;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AB11_RS19585;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 19885 24108 . - . ID=gene-AB11_RS19590;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AB11_RS19590;old_locus_tag=AB11_3712 NZ_JHDH01000149.1 Protein Homology CDS 19885 24108 . - 0 ID=cds-WP_000653944.1;Parent=gene-AB11_RS19590;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AB11_RS19590;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 24185 28213 . - . ID=gene-AB11_RS19595;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AB11_RS19595;old_locus_tag=AB11_3713 NZ_JHDH01000149.1 Protein Homology CDS 24185 28213 . - 0 ID=cds-WP_000263098.1;Parent=gene-AB11_RS19595;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AB11_RS19595;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 28533 28898 . - . ID=gene-AB11_RS19600;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AB11_RS19600;old_locus_tag=AB11_3714 NZ_JHDH01000149.1 Protein Homology CDS 28533 28898 . - 0 ID=cds-WP_000028878.1;Parent=gene-AB11_RS19600;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AB11_RS19600;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 28965 29462 . - . ID=gene-AB11_RS19605;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AB11_RS19605;old_locus_tag=AB11_3715 NZ_JHDH01000149.1 Protein Homology CDS 28965 29462 . - 0 ID=cds-WP_001207201.1;Parent=gene-AB11_RS19605;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AB11_RS19605;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 29875 30579 . - . ID=gene-AB11_RS19610;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AB11_RS19610;old_locus_tag=AB11_3716 NZ_JHDH01000149.1 Protein Homology CDS 29875 30579 . - 0 ID=cds-WP_001096684.1;Parent=gene-AB11_RS19610;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AB11_RS19610;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 30583 31011 . - . ID=gene-AB11_RS19615;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AB11_RS19615;old_locus_tag=AB11_3717 NZ_JHDH01000149.1 Protein Homology CDS 30583 31011 . - 0 ID=cds-WP_001085926.1;Parent=gene-AB11_RS19615;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AB11_RS19615;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 31170 31715 . - . ID=gene-AB11_RS19620;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AB11_RS19620;old_locus_tag=AB11_3718 NZ_JHDH01000149.1 Protein Homology CDS 31170 31715 . - 0 ID=cds-WP_001287516.1;Parent=gene-AB11_RS19620;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AB11_RS19620;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 31717 32100 . - . ID=gene-AB11_RS19625;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AB11_RS19625;old_locus_tag=AB11_3719 NZ_JHDH01000149.1 Protein Homology CDS 31717 32100 . - 0 ID=cds-WP_001275702.1;Parent=gene-AB11_RS19625;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AB11_RS19625;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 32330 33514 . - . ID=gene-AB11_RS19630;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AB11_RS19630;old_locus_tag=AB11_3720 NZ_JHDH01000149.1 Protein Homology CDS 32330 33514 . - 0 ID=cds-WP_000031784.1;Parent=gene-AB11_RS19630;Dbxref=GenBank:WP_000031784.1;Name=WP_000031784.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AB11_RS19630;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 33585 35699 . - . ID=gene-AB11_RS19635;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AB11_RS19635;old_locus_tag=AB11_3721 NZ_JHDH01000149.1 Protein Homology CDS 33585 35699 . - 0 ID=cds-WP_000124700.1;Parent=gene-AB11_RS19635;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AB11_RS19635;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 35796 36266 . - . ID=gene-AB11_RS19640;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AB11_RS19640;old_locus_tag=AB11_3722 NZ_JHDH01000149.1 Protein Homology CDS 35796 36266 . - 0 ID=cds-WP_001138043.1;Parent=gene-AB11_RS19640;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AB11_RS19640;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 36363 36737 . - . ID=gene-AB11_RS19645;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AB11_RS19645;old_locus_tag=AB11_3723 NZ_JHDH01000149.1 Protein Homology CDS 36363 36737 . - 0 ID=cds-WP_000246815.1;Parent=gene-AB11_RS19645;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AB11_RS19645;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 36863 37150 . - . ID=gene-AB11_RS19650;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AB11_RS19650;old_locus_tag=AB11_3724 NZ_JHDH01000149.1 Protein Homology CDS 36863 37150 . - 0 ID=cds-WP_032223899.1;Parent=gene-AB11_RS19650;Dbxref=GenBank:WP_032223899.1;Name=WP_032223899.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AB11_RS19650;product=sulfurtransferase complex subunit TusB;protein_id=WP_032223899.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 37158 37517 . - . ID=gene-AB11_RS19655;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AB11_RS19655;old_locus_tag=AB11_3725 NZ_JHDH01000149.1 Protein Homology CDS 37158 37517 . - 0 ID=cds-WP_000820714.1;Parent=gene-AB11_RS19655;Dbxref=GenBank:WP_000820714.1;Name=WP_000820714.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AB11_RS19655;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820714.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 37517 37903 . - . ID=gene-AB11_RS19660;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AB11_RS19660;old_locus_tag=AB11_3726 NZ_JHDH01000149.1 Protein Homology CDS 37517 37903 . - 0 ID=cds-WP_001209680.1;Parent=gene-AB11_RS19660;Dbxref=GenBank:WP_001209680.1;Name=WP_001209680.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AB11_RS19660;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209680.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 37903 38625 . - . ID=gene-AB11_RS19665;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AB11_RS19665;old_locus_tag=AB11_3727 NZ_JHDH01000149.1 Protein Homology CDS 37903 38625 . - 0 ID=cds-WP_000091466.1;Parent=gene-AB11_RS19665;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AB11_RS19665;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 38792 39604 . - . ID=gene-AB11_RS19670;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AB11_RS19670;old_locus_tag=AB11_3728 NZ_JHDH01000149.1 Protein Homology CDS 38792 39604 . - 0 ID=cds-WP_000838250.1;Parent=gene-AB11_RS19670;Dbxref=GenBank:WP_000838250.1;Name=WP_000838250.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417806.1;locus_tag=AB11_RS19670;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838250.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 39825 40043 . + . ID=gene-AB11_RS19675;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AB11_RS19675;old_locus_tag=AB11_3729 NZ_JHDH01000149.1 Protein Homology CDS 39825 40043 . + 0 ID=cds-WP_001153615.1;Parent=gene-AB11_RS19675;Dbxref=GenBank:WP_001153615.1;Name=WP_001153615.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AB11_RS19675;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 40092 40682 . - . ID=gene-AB11_RS19680;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AB11_RS19680;old_locus_tag=AB11_3730 NZ_JHDH01000149.1 Protein Homology CDS 40092 40682 . - 0 ID=cds-WP_000861334.1;Parent=gene-AB11_RS19680;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AB11_RS19680;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 40777 40977 . - . ID=gene-AB11_RS19685;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AB11_RS19685;old_locus_tag=AB11_3731 NZ_JHDH01000149.1 Protein Homology CDS 40777 40977 . - 0 ID=cds-WP_001007730.1;Parent=gene-AB11_RS19685;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AB11_RS19685;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 40987 42792 . - . ID=gene-AB11_RS19690;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AB11_RS19690;old_locus_tag=AB11_3732 NZ_JHDH01000149.1 Protein Homology CDS 40987 42792 . - 0 ID=cds-WP_000399147.1;Parent=gene-AB11_RS19690;Dbxref=GenBank:WP_000399147.1;Name=WP_000399147.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AB11_RS19690;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399147.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 42792 43343 . - . ID=gene-AB11_RS19695;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AB11_RS19695;old_locus_tag=AB11_3733 NZ_JHDH01000149.1 Protein Homology CDS 42792 43343 . - 0 ID=cds-WP_001297514.1;Parent=gene-AB11_RS19695;Dbxref=GenBank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AB11_RS19695;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 43474 45387 . + . ID=gene-AB11_RS19700;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AB11_RS19700;old_locus_tag=AB11_3734 NZ_JHDH01000149.1 Protein Homology CDS 43474 45387 . + 0 ID=cds-WP_000634798.1;Parent=gene-AB11_RS19700;Dbxref=GenBank:WP_000634798.1;Name=WP_000634798.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AB11_RS19700;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 45387 46409 . + . ID=gene-AB11_RS19705;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AB11_RS19705;old_locus_tag=AB11_3735 NZ_JHDH01000149.1 Protein Homology CDS 45387 46409 . + 0 ID=cds-WP_000057356.1;Parent=gene-AB11_RS19705;Dbxref=GenBank:WP_000057356.1;Name=WP_000057356.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417812.1;locus_tag=AB11_RS19705;product=hydrolase;protein_id=WP_000057356.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 46403 46621 . + . ID=gene-AB11_RS19710;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AB11_RS19710;old_locus_tag=AB11_3736 NZ_JHDH01000149.1 Protein Homology CDS 46403 46621 . + 0 ID=cds-WP_000907085.1;Parent=gene-AB11_RS19710;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AB11_RS19710;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 46675 47544 . + . ID=gene-AB11_RS19715;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AB11_RS19715;old_locus_tag=AB11_3737 NZ_JHDH01000149.1 Protein Homology CDS 46675 47544 . + 0 ID=cds-WP_001274680.1;Parent=gene-AB11_RS19715;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AB11_RS19715;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 47599 48003 . - . ID=gene-AB11_RS19720;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AB11_RS19720;old_locus_tag=AB11_3738 NZ_JHDH01000149.1 Protein Homology CDS 47599 48003 . - 0 ID=cds-WP_001148908.1;Parent=gene-AB11_RS19720;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AB11_RS19720;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 48305 48937 . + . ID=gene-AB11_RS19725;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AB11_RS19725;old_locus_tag=AB11_3739 NZ_JHDH01000149.1 Protein Homology CDS 48305 48937 . + 0 ID=cds-WP_000242755.1;Parent=gene-AB11_RS19725;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AB11_RS19725;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 48988 51078 . + . ID=gene-AB11_RS19730;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AB11_RS19730;old_locus_tag=AB11_3740 NZ_JHDH01000149.1 Protein Homology CDS 48988 51078 . + 0 ID=cds-WP_001295162.1;Parent=gene-AB11_RS19730;Dbxref=GenBank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AB11_RS19730;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 51145 52365 . - . ID=gene-AB11_RS19735;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AB11_RS19735;old_locus_tag=AB11_3741 NZ_JHDH01000149.1 Protein Homology CDS 51145 52365 . - 0 ID=cds-WP_000963792.1;Parent=gene-AB11_RS19735;Dbxref=GenBank:WP_000963792.1;Name=WP_000963792.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AB11_RS19735;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963792.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 52451 53014 . - . ID=gene-AB11_RS19740;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AB11_RS19740;old_locus_tag=AB11_3742 NZ_JHDH01000149.1 Protein Homology CDS 52451 53014 . - 0 ID=cds-WP_000601847.1;Parent=gene-AB11_RS19740;Dbxref=GenBank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AB11_RS19740;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 53046 53648 . - . ID=gene-AB11_RS19745;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AB11_RS19745;old_locus_tag=AB11_3743 NZ_JHDH01000149.1 Protein Homology CDS 53046 53648 . - 0 ID=cds-WP_001280641.1;Parent=gene-AB11_RS19745;Dbxref=GenBank:WP_001280641.1;Name=WP_001280641.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AB11_RS19745;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280641.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 53638 53805 . - . ID=gene-AB11_RS19750;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AB11_RS19750 NZ_JHDH01000149.1 Protein Homology CDS 53638 53805 . - 0 ID=cds-WP_000736862.1;Parent=gene-AB11_RS19750;Dbxref=GenBank:WP_000736862.1;Name=WP_000736862.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312240.1;locus_tag=AB11_RS19750;product=YhfG family protein;protein_id=WP_000736862.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 53910 54482 . - . ID=gene-AB11_RS19755;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AB11_RS19755;old_locus_tag=AB11_3744 NZ_JHDH01000149.1 Protein Homology CDS 53910 54482 . - 0 ID=cds-WP_000477225.1;Parent=gene-AB11_RS19755;Dbxref=GenBank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AB11_RS19755;product=peptidylprolyl isomerase A;protein_id=WP_000477225.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 54753 55934 . + . ID=gene-AB11_RS19760;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AB11_RS19760;old_locus_tag=AB11_3746 NZ_JHDH01000149.1 Protein Homology CDS 54753 55934 . + 0 ID=cds-WP_000185247.1;Parent=gene-AB11_RS19760;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AB11_RS19760;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 56196 58739 . + . ID=gene-AB11_RS19765;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AB11_RS19765;old_locus_tag=AB11_3748 NZ_JHDH01000149.1 Protein Homology CDS 56196 58739 . + 0 ID=cds-WP_000049208.1;Parent=gene-AB11_RS19765;Dbxref=GenBank:WP_000049208.1;Name=WP_000049208.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417824.1;locus_tag=AB11_RS19765;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049208.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 58736 59062 . + . ID=gene-AB11_RS19770;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AB11_RS19770;old_locus_tag=AB11_3749 NZ_JHDH01000149.1 Protein Homology CDS 58736 59062 . + 0 ID=cds-WP_000084764.1;Parent=gene-AB11_RS19770;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AB11_RS19770;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 59188 59994 . + . ID=gene-AB11_RS19775;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AB11_RS19775;old_locus_tag=AB11_3750 NZ_JHDH01000149.1 Protein Homology CDS 59188 59994 . + 0 ID=cds-WP_000493556.1;Parent=gene-AB11_RS19775;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AB11_RS19775;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 60013 61386 . + . ID=gene-AB11_RS19780;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AB11_RS19780;old_locus_tag=AB11_3751 NZ_JHDH01000149.1 Protein Homology CDS 60013 61386 . + 0 ID=cds-WP_000349855.1;Parent=gene-AB11_RS19780;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AB11_RS19780;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 61633 61800 . + . ID=gene-AB11_RS19785;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AB11_RS19785;old_locus_tag=AB11_3752 NZ_JHDH01000149.1 Protein Homology CDS 61633 61800 . + 0 ID=cds-WP_001031834.1;Parent=gene-AB11_RS19785;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AB11_RS19785;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 62095 63432 . + . ID=gene-AB11_RS19790;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AB11_RS19790;old_locus_tag=AB11_3753 NZ_JHDH01000149.1 Protein Homology CDS 62095 63432 . + 0 ID=cds-WP_000535505.1;Parent=gene-AB11_RS19790;Dbxref=GenBank:WP_000535505.1;Name=WP_000535505.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AB11_RS19790;product=fructoselysine/psicoselysine transporter;protein_id=WP_000535505.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 63453 64475 . + . ID=gene-AB11_RS19795;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AB11_RS19795;old_locus_tag=AB11_3754 NZ_JHDH01000149.1 Protein Homology CDS 63453 64475 . + 0 ID=cds-WP_001295163.1;Parent=gene-AB11_RS19795;Dbxref=GenBank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AB11_RS19795;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 64525 65355 . + . ID=gene-AB11_RS19800;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AB11_RS19800;old_locus_tag=AB11_3755 NZ_JHDH01000149.1 Protein Homology CDS 64525 65355 . + 0 ID=cds-WP_000847837.1;Parent=gene-AB11_RS19800;Dbxref=GenBank:WP_000847837.1;Name=WP_000847837.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AB11_RS19800;product=fructoselysine 3-epimerase;protein_id=WP_000847837.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 65352 66137 . + . ID=gene-AB11_RS19805;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AB11_RS19805;old_locus_tag=AB11_3756 NZ_JHDH01000149.1 Protein Homology CDS 65352 66137 . + 0 ID=cds-WP_000853353.1;Parent=gene-AB11_RS19805;Dbxref=GenBank:WP_000853353.1;Name=WP_000853353.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417833.1;locus_tag=AB11_RS19805;product=fructoselysine 6-kinase;protein_id=WP_000853353.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 66237 66968 . + . ID=gene-AB11_RS19810;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AB11_RS19810;old_locus_tag=AB11_3757 NZ_JHDH01000149.1 Protein Homology CDS 66237 66968 . + 0 ID=cds-WP_001276847.1;Parent=gene-AB11_RS19810;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AB11_RS19810;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 67120 68205 . - . ID=gene-AB11_RS19815;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AB11_RS19815;old_locus_tag=AB11_3758 NZ_JHDH01000149.1 Protein Homology CDS 67120 68205 . - 0 ID=cds-WP_000847176.1;Parent=gene-AB11_RS19815;Dbxref=GenBank:WP_000847176.1;Name=WP_000847176.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AB11_RS19815;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847176.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 68217 69521 . - . ID=gene-AB11_RS19820;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AB11_RS19820;old_locus_tag=AB11_3759 NZ_JHDH01000149.1 Protein Homology CDS 68217 69521 . - 0 ID=cds-WP_000366877.1;Parent=gene-AB11_RS19820;Dbxref=GenBank:WP_000366877.1;Name=WP_000366877.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709150.1;locus_tag=AB11_RS19820;product=YhfT family protein;protein_id=WP_000366877.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 69533 69886 . - . ID=gene-AB11_RS19825;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AB11_RS19825;old_locus_tag=AB11_3760 NZ_JHDH01000149.1 Protein Homology CDS 69533 69886 . - 0 ID=cds-WP_001297518.1;Parent=gene-AB11_RS19825;Dbxref=GenBank:WP_001297518.1;Name=WP_001297518.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AB11_RS19825;product=DUF2620 domain-containing protein;protein_id=WP_001297518.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 69897 70775 . - . ID=gene-AB11_RS19830;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AB11_RS19830;old_locus_tag=AB11_3761 NZ_JHDH01000149.1 Protein Homology CDS 69897 70775 . - 0 ID=cds-WP_032223902.1;Parent=gene-AB11_RS19830;Dbxref=GenBank:WP_032223902.1;Name=WP_032223902.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AB11_RS19830;product=phosphotriesterase-related protein;protein_id=WP_032223902.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 70772 71998 . - . ID=gene-AB11_RS19835;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=AB11_RS19835;old_locus_tag=AB11_3762 NZ_JHDH01000149.1 Protein Homology CDS 70772 71998 . - 0 ID=cds-WP_000090578.1;Parent=gene-AB11_RS19835;Dbxref=GenBank:WP_000090578.1;Name=WP_000090578.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709153.1;locus_tag=AB11_RS19835;product=phosphopentomutase;protein_id=WP_000090578.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 71998 73161 . - . ID=gene-AB11_RS19840;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AB11_RS19840;old_locus_tag=AB11_3763 NZ_JHDH01000149.1 Protein Homology CDS 71998 73161 . - 0 ID=cds-WP_032223905.1;Parent=gene-AB11_RS19840;Dbxref=GenBank:WP_032223905.1;Name=WP_032223905.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709154.1;locus_tag=AB11_RS19840;product=YhfX family PLP-dependent enzyme;protein_id=WP_032223905.1;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 73245 73607 . - . ID=gene-AB11_RS19845;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=pseudogene;locus_tag=AB11_RS19845;old_locus_tag=AB11_3764;pseudo=true NZ_JHDH01000149.1 Protein Homology CDS 73245 73607 . - 0 ID=cds-AB11_RS19845;Parent=gene-AB11_RS19845;Note=internal stop;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AB11_RS19845;product=PRD domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 73624 74529 . - . ID=gene-AB11_RS19850;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AB11_RS19850;old_locus_tag=AB11_3765 NZ_JHDH01000149.1 Protein Homology CDS 73624 74529 . - 0 ID=cds-WP_001254790.1;Parent=gene-AB11_RS19850;Dbxref=GenBank:WP_001254790.1;Name=WP_001254790.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AB11_RS19850;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254790.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 74819 75823 . - . ID=gene-AB11_RS19855;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AB11_RS19855;old_locus_tag=AB11_3767 NZ_JHDH01000149.1 Protein Homology CDS 74819 75823 . - 0 ID=cds-WP_000165552.1;Parent=gene-AB11_RS19855;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AB11_RS19855;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 75816 76574 . - . ID=gene-AB11_RS19860;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AB11_RS19860;old_locus_tag=AB11_3768 NZ_JHDH01000149.1 Protein Homology CDS 75816 76574 . - 0 ID=cds-WP_000032691.1;Parent=gene-AB11_RS19860;Dbxref=GenBank:WP_000032691.1;Name=WP_000032691.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AB11_RS19860;product=phosphoglycolate phosphatase;protein_id=WP_000032691.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 76567 77244 . - . ID=gene-AB11_RS19865;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AB11_RS19865;old_locus_tag=AB11_3769 NZ_JHDH01000149.1 Protein Homology CDS 76567 77244 . - 0 ID=cds-WP_000816280.1;Parent=gene-AB11_RS19865;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AB11_RS19865;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 77262 78098 . - . ID=gene-AB11_RS19870;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AB11_RS19870;old_locus_tag=AB11_3770 NZ_JHDH01000149.1 Protein Homology CDS 77262 78098 . - 0 ID=cds-WP_000742141.1;Parent=gene-AB11_RS19870;Dbxref=GenBank:WP_000742141.1;Name=WP_000742141.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AB11_RS19870;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742141.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 78205 79491 . - . ID=gene-AB11_RS19875;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AB11_RS19875;old_locus_tag=AB11_3771 NZ_JHDH01000149.1 Protein Homology CDS 78205 79491 . - 0 ID=cds-WP_000343195.1;Parent=gene-AB11_RS19875;Dbxref=GenBank:WP_000343195.1;Name=WP_000343195.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AB11_RS19875;product=cell division protein DamX;protein_id=WP_000343195.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 79583 80671 . - . ID=gene-AB11_RS19880;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AB11_RS19880;old_locus_tag=AB11_3772 NZ_JHDH01000149.1 Protein Homology CDS 79583 80671 . - 0 ID=cds-WP_000439848.1;Parent=gene-AB11_RS19880;Dbxref=GenBank:WP_000439848.1;Name=WP_000439848.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AB11_RS19880;product=3-dehydroquinate synthase;protein_id=WP_000439848.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 80728 81249 . - . ID=gene-AB11_RS19885;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AB11_RS19885;old_locus_tag=AB11_3773 NZ_JHDH01000149.1 Protein Homology CDS 80728 81249 . - 0 ID=cds-WP_000818618.1;Parent=gene-AB11_RS19885;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AB11_RS19885;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 81650 82887 . - . ID=gene-AB11_RS19890;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=AB11_RS19890;old_locus_tag=AB11_3774;pseudo=true NZ_JHDH01000149.1 Protein Homology CDS 81650 82887 . - 0 ID=cds-AB11_RS19890;Parent=gene-AB11_RS19890;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AB11_RS19890;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 82799 83203 . - . ID=gene-AB11_RS19895;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AB11_RS19895;old_locus_tag=AB11_3775 NZ_JHDH01000149.1 Protein Homology CDS 82799 83203 . - 0 ID=cds-WP_001264141.1;Parent=gene-AB11_RS19895;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AB11_RS19895;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 83193 83633 . - . ID=gene-AB11_RS19900;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AB11_RS19900;old_locus_tag=AB11_3776 NZ_JHDH01000149.1 Protein Homology CDS 83193 83633 . - 0 ID=cds-WP_001055760.1;Parent=gene-AB11_RS19900;Dbxref=GenBank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AB11_RS19900;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 83617 84156 . - . ID=gene-AB11_RS19905;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AB11_RS19905;old_locus_tag=AB11_3777 NZ_JHDH01000149.1 Protein Homology CDS 83617 84156 . - 0 ID=cds-WP_001069315.1;Parent=gene-AB11_RS19905;Dbxref=GenBank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AB11_RS19905;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 84156 84935 . - . ID=gene-AB11_RS19910;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AB11_RS19910;old_locus_tag=AB11_3778 NZ_JHDH01000149.1 Protein Homology CDS 84156 84935 . - 0 ID=cds-WP_001295166.1;Parent=gene-AB11_RS19910;Dbxref=GenBank:WP_001295166.1;Name=WP_001295166.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AB11_RS19910;product=DNA utilization protein HofM;protein_id=WP_001295166.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 85055 87607 . + . ID=gene-AB11_RS19915;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AB11_RS19915;old_locus_tag=AB11_3779 NZ_JHDH01000149.1 Protein Homology CDS 85055 87607 . + 0 ID=cds-WP_001336003.1;Parent=gene-AB11_RS19915;Dbxref=GenBank:WP_001336003.1;Name=WP_001336003.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417855.4;locus_tag=AB11_RS19915;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001336003.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 87773 88333 . - . ID=gene-AB11_RS19920;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AB11_RS19920;old_locus_tag=AB11_3780 NZ_JHDH01000149.1 Protein Homology CDS 87773 88333 . - 0 ID=cds-WP_000045744.1;Parent=gene-AB11_RS19920;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AB11_RS19920;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 88653 90788 . + . ID=gene-AB11_RS19925;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AB11_RS19925;old_locus_tag=AB11_3781 NZ_JHDH01000149.1 Protein Homology CDS 88653 90788 . + 0 ID=cds-WP_000104533.1;Parent=gene-AB11_RS19925;Dbxref=GenBank:WP_000104533.1;Name=WP_000104533.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AB11_RS19925;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104533.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 90853 91521 . + . ID=gene-AB11_RS19930;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AB11_RS19930;old_locus_tag=AB11_3782 NZ_JHDH01000149.1 Protein Homology CDS 90853 91521 . + 0 ID=cds-WP_001295168.1;Parent=gene-AB11_RS19930;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AB11_RS19930;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 91532 91933 . + . ID=gene-AB11_RS19935;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AB11_RS19935;old_locus_tag=AB11_3783 NZ_JHDH01000149.1 Protein Homology CDS 91532 91933 . + 0 ID=cds-WP_000660483.1;Parent=gene-AB11_RS19935;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AB11_RS19935;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 91958 92836 . + . ID=gene-AB11_RS19940;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AB11_RS19940;old_locus_tag=AB11_3784 NZ_JHDH01000149.1 Protein Homology CDS 91958 92836 . + 0 ID=cds-WP_001135574.1;Parent=gene-AB11_RS19940;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AB11_RS19940;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 92899 94623 . - . ID=gene-AB11_RS19945;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AB11_RS19945;old_locus_tag=AB11_3785 NZ_JHDH01000149.1 Protein Homology CDS 92899 94623 . - 0 ID=cds-WP_000370879.1;Parent=gene-AB11_RS19945;Dbxref=GenBank:WP_000370879.1;Name=WP_000370879.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=AB11_RS19945;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 95002 96624 . + . ID=gene-AB11_RS19950;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AB11_RS19950;old_locus_tag=AB11_3787 NZ_JHDH01000149.1 Protein Homology CDS 95002 96624 . + 0 ID=cds-WP_001265681.1;Parent=gene-AB11_RS19950;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AB11_RS19950;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 96700 98052 . - . ID=gene-AB11_RS19955;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AB11_RS19955;old_locus_tag=AB11_3788 NZ_JHDH01000149.1 Protein Homology CDS 96700 98052 . - 0 ID=cds-WP_001253696.1;Parent=gene-AB11_RS19955;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AB11_RS19955;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 98049 98768 . - . ID=gene-AB11_RS19960;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AB11_RS19960;old_locus_tag=AB11_3789 NZ_JHDH01000149.1 Protein Homology CDS 98049 98768 . - 0 ID=cds-WP_001157751.1;Parent=gene-AB11_RS19960;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AB11_RS19960;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 98996 99472 . + . ID=gene-AB11_RS19965;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AB11_RS19965;old_locus_tag=AB11_3790 NZ_JHDH01000149.1 Protein Homology CDS 98996 99472 . + 0 ID=cds-WP_000856737.1;Parent=gene-AB11_RS19965;Dbxref=GenBank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=AB11_RS19965;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 99569 101890 . + . ID=gene-AB11_RS19970;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AB11_RS19970;old_locus_tag=AB11_3791 NZ_JHDH01000149.1 Protein Homology CDS 99569 101890 . + 0 ID=cds-WP_032223907.1;Parent=gene-AB11_RS19970;Dbxref=GenBank:WP_032223907.1;Name=WP_032223907.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AB11_RS19970;product=Tex family protein;protein_id=WP_032223907.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 102347 102574 . + . ID=gene-AB11_RS19975;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AB11_RS19975;old_locus_tag=AB11_3792 NZ_JHDH01000149.1 Protein Homology CDS 102347 102574 . + 0 ID=cds-WP_001200455.1;Parent=gene-AB11_RS19975;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AB11_RS19975;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 102591 104912 . + . ID=gene-AB11_RS19980;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AB11_RS19980;old_locus_tag=AB11_3793 NZ_JHDH01000149.1 Protein Homology CDS 102591 104912 . + 0 ID=cds-WP_000737041.1;Parent=gene-AB11_RS19980;Dbxref=GenBank:WP_000737041.1;Name=WP_000737041.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AB11_RS19980;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737041.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 104912 105148 . + . ID=gene-AB11_RS19985;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AB11_RS19985;old_locus_tag=AB11_3794 NZ_JHDH01000149.1 Protein Homology CDS 104912 105148 . + 0 ID=cds-WP_000157586.1;Parent=gene-AB11_RS19985;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AB11_RS19985;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 105351 106229 . + . ID=gene-AB11_RS19990;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AB11_RS19990;old_locus_tag=AB11_3795 NZ_JHDH01000149.1 Protein Homology CDS 105351 106229 . + 0 ID=cds-WP_000039072.1;Parent=gene-AB11_RS19990;Dbxref=GenBank:WP_000039072.1;Name=WP_000039072.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AB11_RS19990;product=recombination-promoting nuclease RpnA;protein_id=WP_000039072.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 106258 107028 . - . ID=gene-AB11_RS19995;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AB11_RS19995;old_locus_tag=AB11_3796 NZ_JHDH01000149.1 Protein Homology CDS 106258 107028 . - 0 ID=cds-WP_001060070.1;Parent=gene-AB11_RS19995;Dbxref=GenBank:WP_001060070.1;Name=WP_001060070.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AB11_RS19995;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060070.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 107066 107749 . + . ID=gene-AB11_RS20000;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AB11_RS20000;old_locus_tag=AB11_3798 NZ_JHDH01000149.1 Protein Homology CDS 107066 107749 . + 0 ID=cds-WP_001333371.1;Parent=gene-AB11_RS20000;Dbxref=GenBank:WP_001333371.1;Name=WP_001333371.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AB11_RS20000;product=DNA utilization protein GntX;protein_id=WP_001333371.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 107808 108383 . + . ID=gene-AB11_RS20005;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AB11_RS20005;old_locus_tag=AB11_3799 NZ_JHDH01000149.1 Protein Homology CDS 107808 108383 . + 0 ID=cds-WP_000619389.1;Parent=gene-AB11_RS20005;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AB11_RS20005;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 108743 110059 . + . ID=gene-AB11_RS20010;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AB11_RS20010;old_locus_tag=AB11_3800 NZ_JHDH01000149.1 Protein Homology CDS 108743 110059 . + 0 ID=cds-WP_001131758.1;Parent=gene-AB11_RS20010;Dbxref=GenBank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AB11_RS20010;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 110170 112254 . - . ID=gene-AB11_RS20015;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AB11_RS20015;old_locus_tag=AB11_3801 NZ_JHDH01000149.1 Protein Homology CDS 110170 112254 . - 0 ID=cds-WP_000444343.1;Parent=gene-AB11_RS20015;Dbxref=GenBank:WP_000444343.1;Name=WP_000444343.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AB11_RS20015;product=4-alpha-glucanotransferase;protein_id=WP_000444343.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 112264 114657 . - . ID=gene-AB11_RS20020;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AB11_RS20020;old_locus_tag=AB11_3802 NZ_JHDH01000149.1 Protein Homology CDS 112264 114657 . - 0 ID=cds-WP_001556281.1;Parent=gene-AB11_RS20020;Dbxref=GenBank:WP_001556281.1;Name=WP_001556281.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AB11_RS20020;product=maltodextrin phosphorylase;protein_id=WP_001556281.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 115269 117974 . + . ID=gene-AB11_RS20025;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AB11_RS20025;old_locus_tag=AB11_3803 NZ_JHDH01000149.1 Protein Homology CDS 115269 117974 . + 0 ID=cds-WP_000906961.1;Parent=gene-AB11_RS20025;Dbxref=GenBank:WP_000906961.1;Name=WP_000906961.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417877.1;locus_tag=AB11_RS20025;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906961.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 118017 119033 . - . ID=gene-AB11_RS20030;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AB11_RS20030 NZ_JHDH01000149.1 Protein Homology CDS 118017 119033 . - 0 ID=cds-WP_001335950.1;Parent=gene-AB11_RS20030;Dbxref=GenBank:WP_001335950.1;Name=WP_001335950.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AB11_RS20030;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001335950.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 119037 120263 . - . ID=gene-AB11_RS20035;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AB11_RS20035;old_locus_tag=AB11_3805 NZ_JHDH01000149.1 Protein Homology CDS 119037 120263 . - 0 ID=cds-WP_001105504.1;Parent=gene-AB11_RS20035;Dbxref=GenBank:WP_001105504.1;Name=WP_001105504.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AB11_RS20035;product=RNA-splicing ligase RtcB;protein_id=WP_001105504.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 120452 122050 . + . ID=gene-AB11_RS20040;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AB11_RS20040;old_locus_tag=AB11_3806 NZ_JHDH01000149.1 Protein Homology CDS 120452 122050 . + 0 ID=cds-WP_001232946.1;Parent=gene-AB11_RS20040;Dbxref=GenBank:WP_001232946.1;Name=WP_001232946.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AB11_RS20040;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232946.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 122032 122790 . - . ID=gene-AB11_RS20045;Name=AB11_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20045;old_locus_tag=AB11_3807 NZ_JHDH01000149.1 Protein Homology CDS 122032 122790 . - 0 ID=cds-WP_000815099.1;Parent=gene-AB11_RS20045;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AB11_RS20045;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 122807 123637 . - . ID=gene-AB11_RS20050;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AB11_RS20050;old_locus_tag=AB11_3808 NZ_JHDH01000149.1 Protein Homology CDS 122807 123637 . - 0 ID=cds-WP_032223910.1;Parent=gene-AB11_RS20050;Dbxref=GenBank:WP_032223910.1;Name=WP_032223910.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AB11_RS20050;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_032223910.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 123682 124008 . - . ID=gene-AB11_RS20055;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AB11_RS20055;old_locus_tag=AB11_3809 NZ_JHDH01000149.1 Protein Homology CDS 123682 124008 . - 0 ID=cds-WP_000371928.1;Parent=gene-AB11_RS20055;Dbxref=GenBank:WP_000371928.1;Name=WP_000371928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AB11_RS20055;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 124198 125703 . + . ID=gene-AB11_RS20060;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AB11_RS20060;old_locus_tag=AB11_3810 NZ_JHDH01000149.1 Protein Homology CDS 124198 125703 . + 0 ID=cds-WP_032223912.1;Parent=gene-AB11_RS20060;Dbxref=GenBank:WP_032223912.1;Name=WP_032223912.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417884.1;locus_tag=AB11_RS20060;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032223912.1;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 125972 126193 . - . ID=gene-AB11_RS20065;Name=AB11_RS20065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20065;old_locus_tag=AB11_3811;partial=true;pseudo=true;start_range=.,125972 NZ_JHDH01000149.1 Protein Homology CDS 125972 126193 . - 0 ID=cds-AB11_RS20065;Parent=gene-AB11_RS20065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312299.2;locus_tag=AB11_RS20065;partial=true;product=phosphate ABC transporter substrate-binding protein;pseudo=true;start_range=.,125972;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 126318 128765 . - . ID=gene-AB11_RS20070;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AB11_RS20070;old_locus_tag=AB11_3812 NZ_JHDH01000149.1 Protein Homology CDS 126318 128765 . - 0 ID=cds-WP_000993440.1;Parent=gene-AB11_RS20070;Dbxref=GenBank:WP_000993440.1;Name=WP_000993440.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AB11_RS20070;product=glycogen phosphorylase;protein_id=WP_000993440.1;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 128784 130216 . - . ID=gene-AB11_RS20075;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=AB11_RS20075;pseudo=true NZ_JHDH01000149.1 Protein Homology CDS 128784 130216 . - 0 ID=cds-AB11_RS20075;Parent=gene-AB11_RS20075;Note=frameshifted;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AB11_RS20075;product=glycogen synthase GlgA;pseudo=true;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 130216 131511 . - . ID=gene-AB11_RS20080;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AB11_RS20080;old_locus_tag=AB11_3815 NZ_JHDH01000149.1 Protein Homology CDS 130216 131511 . - 0 ID=cds-WP_000253975.1;Parent=gene-AB11_RS20080;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AB11_RS20080;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 131529 133502 . - . ID=gene-AB11_RS20085;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AB11_RS20085;old_locus_tag=AB11_3816 NZ_JHDH01000149.1 Protein Homology CDS 131529 133502 . - 0 ID=cds-WP_032176657.1;Parent=gene-AB11_RS20085;Dbxref=GenBank:WP_032176657.1;Name=WP_032176657.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AB11_RS20085;product=glycogen debranching protein GlgX;protein_id=WP_032176657.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 133499 135685 . - . ID=gene-AB11_RS20090;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AB11_RS20090;old_locus_tag=AB11_3817 NZ_JHDH01000149.1 Protein Homology CDS 133499 135685 . - 0 ID=cds-WP_001283723.1;Parent=gene-AB11_RS20090;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AB11_RS20090;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 135957 137060 . - . ID=gene-AB11_RS20095;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB11_RS20095;old_locus_tag=AB11_3818 NZ_JHDH01000149.1 Protein Homology CDS 135957 137060 . - 0 ID=cds-WP_000799956.1;Parent=gene-AB11_RS20095;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AB11_RS20095;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 137252 137845 . + . ID=gene-AB11_RS20100;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AB11_RS20100;old_locus_tag=AB11_3819 NZ_JHDH01000149.1 Protein Homology CDS 137252 137845 . + 0 ID=cds-WP_001002544.1;Parent=gene-AB11_RS20100;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AB11_RS20100;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 137902 139242 . - . ID=gene-AB11_RS20105;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AB11_RS20105;old_locus_tag=AB11_3820 NZ_JHDH01000149.1 Protein Homology CDS 137902 139242 . - 0 ID=cds-WP_000210111.1;Parent=gene-AB11_RS20105;Dbxref=GenBank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AB11_RS20105;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 139246 139773 . - . ID=gene-AB11_RS20110;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AB11_RS20110;old_locus_tag=AB11_3821 NZ_JHDH01000149.1 Protein Homology CDS 139246 139773 . - 0 ID=cds-WP_000108330.1;Parent=gene-AB11_RS20110;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AB11_RS20110;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 139912 140907 . - . ID=gene-AB11_RS20115;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AB11_RS20115;old_locus_tag=AB11_3822 NZ_JHDH01000149.1 Protein Homology CDS 139912 140907 . - 0 ID=cds-WP_001556284.1;Parent=gene-AB11_RS20115;Dbxref=GenBank:WP_001556284.1;Name=WP_001556284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AB11_RS20115;product=gluconate operon transcriptional repressor GntR;protein_id=WP_001556284.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 141131 141826 . - . ID=gene-AB11_RS20120;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AB11_RS20120;old_locus_tag=AB11_3823 NZ_JHDH01000149.1 Protein Homology CDS 141131 141826 . - 0 ID=cds-WP_000639811.1;Parent=gene-AB11_RS20120;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AB11_RS20120;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 141949 142986 . - . ID=gene-AB11_RS20125;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AB11_RS20125;old_locus_tag=AB11_3824 NZ_JHDH01000149.1 Protein Homology CDS 141949 142986 . - 0 ID=cds-WP_000236293.1;Parent=gene-AB11_RS20125;Dbxref=GenBank:WP_000236293.1;Name=WP_000236293.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AB11_RS20125;product=oxidoreductase;protein_id=WP_000236293.1;transl_table=11 NZ_JHDH01000149.1 RefSeq gene 143319 143807 . + . ID=gene-AB11_RS20130;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AB11_RS20130 NZ_JHDH01000149.1 Protein Homology CDS 143319 143807 . + 0 ID=cds-WP_001295206.1;Parent=gene-AB11_RS20130;Dbxref=GenBank:WP_001295206.1;Name=WP_001295206.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AB11_RS20130;product=N-acetyltransferase;protein_id=WP_001295206.1;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 144044 144445 . + . ID=gene-AB11_RS20135;Name=tssD;end_range=144445,.;gbkey=Gene;gene=tssD;gene_biotype=pseudogene;locus_tag=AB11_RS20135;partial=true;pseudo=true NZ_JHDH01000149.1 Protein Homology CDS 144044 144445 . + 0 ID=cds-AB11_RS20135;Parent=gene-AB11_RS20135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=144445,.;gbkey=CDS;gene=tssD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AB11_RS20135;partial=true;product=type VI secretion system tube protein TssD;pseudo=true;transl_table=11 NZ_JHDH01000149.1 RefSeq pseudogene 144476 145069 . - . ID=gene-AB11_RS20140;Name=AB11_RS20140;end_range=145069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20140;old_locus_tag=AB11_3826;partial=true;pseudo=true NZ_JHDH01000149.1 Protein Homology CDS 144476 145069 . - 0 ID=cds-AB11_RS20140;Parent=gene-AB11_RS20140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=145069,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS20140;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000150.1 1 37567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000150.1 RefSeq region 1 37567 . + . ID=NZ_JHDH01000150.1:1..37567;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000150.1 RefSeq pseudogene 1 383 . - . ID=gene-AB11_RS20145;Name=AB11_RS20145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20145;old_locus_tag=AB11_3827;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000150.1 Protein Homology CDS 1 383 . - 0 ID=cds-AB11_RS20145;Parent=gene-AB11_RS20145;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS20145;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000150.1 RefSeq pseudogene 449 1228 . + . ID=gene-AB11_RS20150;Name=AB11_RS20150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20150;old_locus_tag=AB11_3828;partial=true;pseudo=true;start_range=.,449 NZ_JHDH01000150.1 Protein Homology CDS 449 1228 . + 0 ID=cds-AB11_RS20150;Parent=gene-AB11_RS20150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AB11_RS20150;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,449;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 1225 1719 . + . ID=gene-AB11_RS20155;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=protein_coding;locus_tag=AB11_RS20155;old_locus_tag=AB11_3829 NZ_JHDH01000150.1 Protein Homology CDS 1225 1719 . + 0 ID=cds-WP_000988496.1;Parent=gene-AB11_RS20155;Dbxref=GenBank:WP_000988496.1;Name=WP_000988496.1;gbkey=CDS;gene=yrhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1;locus_tag=AB11_RS20155;product=protein YrhA;protein_id=WP_000988496.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 1814 1969 . + . ID=gene-AB11_RS20160;Name=yrhD;gbkey=Gene;gene=yrhD;gene_biotype=protein_coding;locus_tag=AB11_RS20160 NZ_JHDH01000150.1 Protein Homology CDS 1814 1969 . + 0 ID=cds-WP_001307436.1;Parent=gene-AB11_RS20160;Dbxref=GenBank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;gene=yrhD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=AB11_RS20160;product=protein YrhD;protein_id=WP_001307436.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 2169 2453 . + . ID=gene-AB11_RS20165;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AB11_RS20165;old_locus_tag=AB11_3830 NZ_JHDH01000150.1 Protein Homology CDS 2169 2453 . + 0 ID=cds-WP_000634159.1;Parent=gene-AB11_RS20165;Dbxref=GenBank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AB11_RS20165;product=YrhB family protein;protein_id=WP_000634159.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 2491 4233 . - . ID=gene-AB11_RS20170;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AB11_RS20170;old_locus_tag=AB11_3831 NZ_JHDH01000150.1 Protein Homology CDS 2491 4233 . - 0 ID=cds-WP_000595071.1;Parent=gene-AB11_RS20170;Dbxref=GenBank:WP_000595071.1;Name=WP_000595071.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417904.1;locus_tag=AB11_RS20170;product=gamma-glutamyltransferase;protein_id=WP_000595071.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 4353 4793 . + . ID=gene-AB11_RS20175;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AB11_RS20175;old_locus_tag=AB11_3832 NZ_JHDH01000150.1 Protein Homology CDS 4353 4793 . + 0 ID=cds-WP_000825996.1;Parent=gene-AB11_RS20175;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AB11_RS20175;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 4780 5523 . - . ID=gene-AB11_RS20180;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AB11_RS20180;old_locus_tag=AB11_3833 NZ_JHDH01000150.1 Protein Homology CDS 4780 5523 . - 0 ID=cds-WP_000073599.1;Parent=gene-AB11_RS20180;Dbxref=GenBank:WP_000073599.1;Name=WP_000073599.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=AB11_RS20180;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073599.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 5520 6590 . - . ID=gene-AB11_RS20185;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AB11_RS20185;old_locus_tag=AB11_3834 NZ_JHDH01000150.1 Protein Homology CDS 5520 6590 . - 0 ID=cds-WP_032223930.1;Parent=gene-AB11_RS20185;Dbxref=GenBank:WP_032223930.1;Name=WP_032223930.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AB11_RS20185;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_032223930.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 6592 7437 . - . ID=gene-AB11_RS20190;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AB11_RS20190;old_locus_tag=AB11_3835 NZ_JHDH01000150.1 Protein Homology CDS 6592 7437 . - 0 ID=cds-WP_000572176.1;Parent=gene-AB11_RS20190;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AB11_RS20190;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 7434 8321 . - . ID=gene-AB11_RS20195;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AB11_RS20195;old_locus_tag=AB11_3836 NZ_JHDH01000150.1 Protein Homology CDS 7434 8321 . - 0 ID=cds-WP_000099289.1;Parent=gene-AB11_RS20195;Dbxref=GenBank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AB11_RS20195;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 8419 9735 . - . ID=gene-AB11_RS20200;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AB11_RS20200;old_locus_tag=AB11_3837 NZ_JHDH01000150.1 Protein Homology CDS 8419 9735 . - 0 ID=cds-WP_000803190.1;Parent=gene-AB11_RS20200;Dbxref=GenBank:WP_000803190.1;Name=WP_000803190.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AB11_RS20200;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803190.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 10132 10845 . - . ID=gene-AB11_RS20205;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AB11_RS20205;old_locus_tag=AB11_3839 NZ_JHDH01000150.1 Protein Homology CDS 10132 10845 . - 0 ID=cds-WP_000416895.1;Parent=gene-AB11_RS20205;Dbxref=GenBank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AB11_RS20205;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 10847 11614 . - . ID=gene-AB11_RS20210;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AB11_RS20210;old_locus_tag=AB11_3840 NZ_JHDH01000150.1 Protein Homology CDS 10847 11614 . - 0 ID=cds-WP_000082101.1;Parent=gene-AB11_RS20210;Dbxref=GenBank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AB11_RS20210;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 11611 12888 . - . ID=gene-AB11_RS20215;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AB11_RS20215;old_locus_tag=AB11_3841 NZ_JHDH01000150.1 Protein Homology CDS 11611 12888 . - 0 ID=cds-WP_000803797.1;Parent=gene-AB11_RS20215;Dbxref=GenBank:WP_000803797.1;Name=WP_000803797.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AB11_RS20215;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803797.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 12885 13811 . - . ID=gene-AB11_RS20220;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AB11_RS20220;old_locus_tag=AB11_3842 NZ_JHDH01000150.1 Protein Homology CDS 12885 13811 . - 0 ID=cds-WP_001295111.1;Parent=gene-AB11_RS20220;Dbxref=GenBank:WP_001295111.1;Name=WP_001295111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AB11_RS20220;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 13859 14968 . - . ID=gene-AB11_RS20225;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AB11_RS20225;old_locus_tag=AB11_3843 NZ_JHDH01000150.1 Protein Homology CDS 13859 14968 . - 0 ID=cds-WP_000827696.1;Parent=gene-AB11_RS20225;Dbxref=GenBank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AB11_RS20225;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 15392 15775 . + . ID=gene-AB11_RS20230;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AB11_RS20230;old_locus_tag=AB11_3845 NZ_JHDH01000150.1 Protein Homology CDS 15392 15775 . + 0 ID=cds-WP_000778795.1;Parent=gene-AB11_RS20230;Dbxref=GenBank:WP_000778795.1;Name=WP_000778795.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AB11_RS20230;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778795.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 15975 17078 . - . ID=gene-AB11_RS20235;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AB11_RS20235;old_locus_tag=AB11_3847 NZ_JHDH01000150.1 Protein Homology CDS 15975 17078 . - 0 ID=cds-WP_077699304.1;Parent=gene-AB11_RS20235;Dbxref=GenBank:WP_077699304.1;Name=WP_077699304.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AB11_RS20235;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_077699304.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 17349 18203 . - . ID=gene-AB11_RS20240;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AB11_RS20240;old_locus_tag=AB11_3848 NZ_JHDH01000150.1 Protein Homology CDS 17349 18203 . - 0 ID=cds-WP_000130217.1;Parent=gene-AB11_RS20240;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AB11_RS20240;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 18448 19506 . - . ID=gene-AB11_RS20245;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AB11_RS20245;old_locus_tag=AB11_3849 NZ_JHDH01000150.1 Protein Homology CDS 18448 19506 . - 0 ID=cds-WP_001042003.1;Parent=gene-AB11_RS20245;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AB11_RS20245;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 19499 20167 . - . ID=gene-AB11_RS20250;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AB11_RS20250;old_locus_tag=AB11_3850 NZ_JHDH01000150.1 Protein Homology CDS 19499 20167 . - 0 ID=cds-WP_000617723.1;Parent=gene-AB11_RS20250;Dbxref=GenBank:WP_000617723.1;Name=WP_000617723.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AB11_RS20250;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 20170 21666 . - . ID=gene-AB11_RS20255;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AB11_RS20255;old_locus_tag=AB11_3851 NZ_JHDH01000150.1 Protein Homology CDS 20170 21666 . - 0 ID=cds-WP_001040656.1;Parent=gene-AB11_RS20255;Dbxref=GenBank:WP_001040656.1;Name=WP_001040656.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AB11_RS20255;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040656.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 21816 22412 . + . ID=gene-AB11_RS20260;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AB11_RS20260;old_locus_tag=AB11_3852 NZ_JHDH01000150.1 Protein Homology CDS 21816 22412 . + 0 ID=cds-WP_000743193.1;Parent=gene-AB11_RS20260;Dbxref=GenBank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AB11_RS20260;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 22402 22671 . + . ID=gene-AB11_RS20265;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AB11_RS20265;old_locus_tag=AB11_3853 NZ_JHDH01000150.1 Protein Homology CDS 22402 22671 . + 0 ID=cds-WP_001311191.1;Parent=gene-AB11_RS20265;Dbxref=GenBank:WP_001311191.1;Name=WP_001311191.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417923.1;locus_tag=AB11_RS20265;product=DUF1145 family protein;protein_id=WP_001311191.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 22674 23033 . - . ID=gene-AB11_RS20270;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AB11_RS20270;old_locus_tag=AB11_3854 NZ_JHDH01000150.1 Protein Homology CDS 22674 23033 . - 0 ID=cds-WP_000042895.1;Parent=gene-AB11_RS20270;Dbxref=GenBank:WP_000042895.1;Name=WP_000042895.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417924.1;locus_tag=AB11_RS20270;product=DUF2500 domain-containing protein;protein_id=WP_000042895.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 23174 23800 . + . ID=gene-AB11_RS20275;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AB11_RS20275;old_locus_tag=AB11_3855 NZ_JHDH01000150.1 Protein Homology CDS 23174 23800 . + 0 ID=cds-WP_000964718.1;Parent=gene-AB11_RS20275;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AB11_RS20275;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 23874 26072 . + . ID=gene-AB11_RS20280;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AB11_RS20280;old_locus_tag=AB11_3856 NZ_JHDH01000150.1 Protein Homology CDS 23874 26072 . + 0 ID=cds-WP_000106551.1;Parent=gene-AB11_RS20280;Dbxref=GenBank:WP_000106551.1;Name=WP_000106551.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417926.1;locus_tag=AB11_RS20280;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106551.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 26174 26419 . - . ID=gene-AB11_RS20285;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AB11_RS20285;old_locus_tag=AB11_3857 NZ_JHDH01000150.1 Protein Homology CDS 26174 26419 . - 0 ID=cds-WP_000130621.1;Parent=gene-AB11_RS20285;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AB11_RS20285;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 26640 27305 . + . ID=gene-AB11_RS20290;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AB11_RS20290;old_locus_tag=AB11_3858 NZ_JHDH01000150.1 Protein Homology CDS 26640 27305 . + 0 ID=cds-WP_001100469.1;Parent=gene-AB11_RS20290;Dbxref=GenBank:WP_001100469.1;Name=WP_001100469.1;Ontology_term=GO:0160254;gbkey=CDS;gene=yhhQ;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AB11_RS20290;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 27378 27935 . + . ID=gene-AB11_RS20295;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AB11_RS20295;old_locus_tag=AB11_3859 NZ_JHDH01000150.1 Protein Homology CDS 27378 27935 . + 0 ID=cds-WP_001245295.1;Parent=gene-AB11_RS20295;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AB11_RS20295;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 27939 29156 . - . ID=gene-AB11_RS20300;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AB11_RS20300;old_locus_tag=AB11_3860 NZ_JHDH01000150.1 Protein Homology CDS 27939 29156 . - 0 ID=cds-WP_001300943.1;Parent=gene-AB11_RS20300;Dbxref=GenBank:WP_001300943.1;Name=WP_001300943.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AB11_RS20300;product=MFS transporter;protein_id=WP_001300943.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 29288 30337 . + . ID=gene-AB11_RS20305;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AB11_RS20305;old_locus_tag=AB11_3861 NZ_JHDH01000150.1 Protein Homology CDS 29288 30337 . + 0 ID=cds-WP_001300885.1;Parent=gene-AB11_RS20305;Dbxref=GenBank:WP_001300885.1;Name=WP_001300885.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AB11_RS20305;product=AI-2E family transporter;protein_id=WP_001300885.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 30392 30979 . + . ID=gene-AB11_RS20310;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AB11_RS20310;old_locus_tag=AB11_3862 NZ_JHDH01000150.1 Protein Homology CDS 30392 30979 . + 0 ID=cds-WP_000285774.1;Parent=gene-AB11_RS20310;Dbxref=GenBank:WP_000285774.1;Name=WP_000285774.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417932.1;locus_tag=AB11_RS20310;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285774.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 31090 32664 . + . ID=gene-AB11_RS20315;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AB11_RS20315;old_locus_tag=AB11_3863 NZ_JHDH01000150.1 Protein Homology CDS 31090 32664 . + 0 ID=cds-WP_000953361.1;Parent=gene-AB11_RS20315;Dbxref=GenBank:WP_000953361.1;Name=WP_000953361.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AB11_RS20315;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953361.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 32664 33608 . + . ID=gene-AB11_RS20320;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AB11_RS20320;old_locus_tag=AB11_3864 NZ_JHDH01000150.1 Protein Homology CDS 32664 33608 . + 0 ID=cds-WP_000947068.1;Parent=gene-AB11_RS20320;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AB11_RS20320;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 33605 34438 . + . ID=gene-AB11_RS20325;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AB11_RS20325;old_locus_tag=AB11_3865 NZ_JHDH01000150.1 Protein Homology CDS 33605 34438 . + 0 ID=cds-WP_001008963.1;Parent=gene-AB11_RS20325;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AB11_RS20325;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 34438 35202 . + . ID=gene-AB11_RS20330;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AB11_RS20330;old_locus_tag=AB11_3866 NZ_JHDH01000150.1 Protein Homology CDS 34438 35202 . + 0 ID=cds-WP_001136229.1;Parent=gene-AB11_RS20330;Dbxref=GenBank:WP_001136229.1;Name=WP_001136229.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AB11_RS20330;product=nickel import ATP-binding protein NikD;protein_id=WP_001136229.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 35199 36005 . + . ID=gene-AB11_RS20335;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AB11_RS20335;old_locus_tag=AB11_3867 NZ_JHDH01000150.1 Protein Homology CDS 35199 36005 . + 0 ID=cds-WP_000173631.1;Parent=gene-AB11_RS20335;Dbxref=GenBank:WP_000173631.1;Name=WP_000173631.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AB11_RS20335;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 36011 36412 . + . ID=gene-AB11_RS20340;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AB11_RS20340;old_locus_tag=AB11_3868 NZ_JHDH01000150.1 Protein Homology CDS 36011 36412 . + 0 ID=cds-WP_001190062.1;Parent=gene-AB11_RS20340;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AB11_RS20340;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JHDH01000150.1 RefSeq gene 36615 37567 . + . ID=gene-AB11_RS20345;Name=AB11_RS20345;end_range=37567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20345;old_locus_tag=AB11_3869;partial=true NZ_JHDH01000150.1 Protein Homology CDS 36615 37567 . + 0 ID=cds-WP_032223937.1;Parent=gene-AB11_RS20345;Dbxref=GenBank:WP_032223937.1;Name=WP_032223937.1;end_range=37567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB11_RS20345;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032223937.1;transl_table=11 ##sequence-region NZ_JHDH01000151.1 1 2363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000151.1 RefSeq region 1 2363 . + . ID=NZ_JHDH01000151.1:1..2363;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000151.1 RefSeq pseudogene 1 1309 . + . ID=gene-AB11_RS20350;Name=rhsB;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AB11_RS20350;old_locus_tag=AB11_3870;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000151.1 Protein Homology CDS 1 1309 . + 1 ID=cds-AB11_RS20350;Parent=gene-AB11_RS20350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB11_RS20350;partial=true;product=rhs element protein RhsB;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000151.1 RefSeq gene 1281 1664 . + . ID=gene-AB11_RS20355;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;locus_tag=AB11_RS20355 NZ_JHDH01000151.1 Protein Homology CDS 1281 1664 . + 0 ID=cds-WP_001271686.1;Parent=gene-AB11_RS20355;Dbxref=GenBank:WP_001271686.1;Name=WP_001271686.1;Note=This BlastRule distinguishes YhhH from its paralog YbbC. Both are named for founding members from Escherichia coli K-12%2C and belong Pfam family PF15631.;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=AB11_RS20355;product=protein YhhH;protein_id=WP_001271686.1;transl_table=11 NZ_JHDH01000151.1 RefSeq pseudogene 1769 2119 . + . ID=gene-AB11_RS20360;Name=AB11_RS20360;end_range=2119,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20360;partial=true;pseudo=true NZ_JHDH01000151.1 Protein Homology CDS 1769 2119 . + 0 ID=cds-AB11_RS20360;Parent=gene-AB11_RS20360;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AB11_RS20360;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000151.1 RefSeq gene 2260 2363 . + . ID=gene-AB11_RS25370;Name=AB11_RS25370;end_range=2363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25370;old_locus_tag=AB11_3871;partial=true NZ_JHDH01000151.1 Protein Homology CDS 2260 2363 . + 0 ID=cds-WP_140412110.1;Parent=gene-AB11_RS25370;Dbxref=GenBank:WP_140412110.1;Name=WP_140412110.1;end_range=2363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS25370;partial=true;product=transposase family protein;protein_id=WP_140412110.1;transl_table=11 ##sequence-region NZ_JHDH01000152.1 1 41286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000152.1 RefSeq region 1 41286 . + . ID=NZ_JHDH01000152.1:1..41286;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000152.1 RefSeq gene 1 434 . + . ID=gene-AB11_RS20370;Name=AB11_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20370;old_locus_tag=AB11_3872;partial=true;start_range=.,1 NZ_JHDH01000152.1 Protein Homology CDS 1 434 . + 2 ID=cds-WP_024203708.1;Parent=gene-AB11_RS20370;Dbxref=GenBank:WP_024203708.1;Name=WP_024203708.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB11_RS20370;partial=true;product=ISAs1 family transposase;protein_id=WP_024203708.1;start_range=.,1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 599 1723 . - . ID=gene-AB11_RS20375;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AB11_RS20375;old_locus_tag=AB11_3873 NZ_JHDH01000152.1 Protein Homology CDS 599 1723 . - 0 ID=cds-WP_001216257.1;Parent=gene-AB11_RS20375;Dbxref=GenBank:WP_001216257.1;Name=WP_001216257.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AB11_RS20375;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 1723 4458 . - . ID=gene-AB11_RS20380;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AB11_RS20380;old_locus_tag=AB11_3874 NZ_JHDH01000152.1 Protein Homology CDS 1723 4458 . - 0 ID=cds-WP_000149156.1;Parent=gene-AB11_RS20380;Dbxref=GenBank:WP_000149156.1;Name=WP_000149156.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AB11_RS20380;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149156.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 4455 5522 . - . ID=gene-AB11_RS20385;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AB11_RS20385;old_locus_tag=AB11_3875 NZ_JHDH01000152.1 Protein Homology CDS 4455 5522 . - 0 ID=cds-WP_000361491.1;Parent=gene-AB11_RS20385;Dbxref=GenBank:WP_000361491.1;Name=WP_000361491.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AB11_RS20385;product=HlyD family secretion protein;protein_id=WP_000361491.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 5585 5698 . - . ID=gene-AB11_RS25375;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AB11_RS25375;old_locus_tag=AB11_3876 NZ_JHDH01000152.1 Protein Homology CDS 5585 5698 . - 0 ID=cds-WP_001296785.1;Parent=gene-AB11_RS25375;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AB11_RS25375;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 5888 7510 . - . ID=gene-AB11_RS20390;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AB11_RS20390;old_locus_tag=AB11_3877 NZ_JHDH01000152.1 Protein Homology CDS 5888 7510 . - 0 ID=cds-WP_001311193.1;Parent=gene-AB11_RS20390;Dbxref=GenBank:WP_001311193.1;Name=WP_001311193.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AB11_RS20390;product=YhiJ/YhiL family protein;protein_id=WP_001311193.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 7772 9379 . - . ID=gene-AB11_RS20395;Name=AB11_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20395;old_locus_tag=AB11_3878 NZ_JHDH01000152.1 Protein Homology CDS 7772 9379 . - 0 ID=cds-WP_000643701.1;Parent=gene-AB11_RS20395;Dbxref=GenBank:WP_000643701.1;Name=WP_000643701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AB11_RS20395;product=YhiJ/YhiL family protein;protein_id=WP_000643701.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 9762 10814 . + . ID=gene-AB11_RS20400;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AB11_RS20400;old_locus_tag=AB11_3881 NZ_JHDH01000152.1 Protein Homology CDS 9762 10814 . + 0 ID=cds-WP_001028905.1;Parent=gene-AB11_RS20400;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AB11_RS20400;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 11129 12331 . - . ID=gene-AB11_RS20405;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AB11_RS20405;old_locus_tag=AB11_3882 NZ_JHDH01000152.1 Protein Homology CDS 11129 12331 . - 0 ID=cds-WP_000439170.1;Parent=gene-AB11_RS20405;Dbxref=GenBank:WP_000439170.1;Name=WP_000439170.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AB11_RS20405;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439170.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 12563 14062 . + . ID=gene-AB11_RS20410;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AB11_RS20410;old_locus_tag=AB11_3883 NZ_JHDH01000152.1 Protein Homology CDS 12563 14062 . + 0 ID=cds-WP_001397239.1;Parent=gene-AB11_RS20410;Dbxref=GenBank:WP_001397239.1;Name=WP_001397239.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AB11_RS20410;product=inorganic phosphate transporter PitA;protein_id=WP_001397239.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 14306 14641 . - . ID=gene-AB11_RS20415;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AB11_RS20415;old_locus_tag=AB11_3884 NZ_JHDH01000152.1 Protein Homology CDS 14306 14641 . - 0 ID=cds-WP_000626187.1;Parent=gene-AB11_RS20415;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AB11_RS20415;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 15032 15466 . + . ID=gene-AB11_RS20420;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AB11_RS20420;old_locus_tag=AB11_3885 NZ_JHDH01000152.1 Protein Homology CDS 15032 15466 . + 0 ID=cds-WP_000323571.1;Parent=gene-AB11_RS20420;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AB11_RS20420;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 15533 15586 . - . ID=gene-AB11_RS25380;Name=AB11_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25380 NZ_JHDH01000152.1 Protein Homology CDS 15533 15586 . - 0 ID=cds-WP_223200729.1;Parent=gene-AB11_RS25380;Dbxref=GenBank:WP_223200729.1;Name=WP_223200729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=AB11_RS25380;product=hypothetical protein;protein_id=WP_223200729.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 15564 15617 . - . ID=gene-AB11_RS25620;Name=AB11_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25620 NZ_JHDH01000152.1 Protein Homology CDS 15564 15617 . - 0 ID=cds-WP_211180512.1;Parent=gene-AB11_RS25620;Dbxref=GenBank:WP_211180512.1;Name=WP_211180512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AB11_RS25620;product=protein YriB;protein_id=WP_211180512.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 15783 17252 . + . ID=gene-AB11_RS20425;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AB11_RS20425;old_locus_tag=AB11_3887 NZ_JHDH01000152.1 Protein Homology CDS 15783 17252 . + 0 ID=cds-WP_001098652.1;Parent=gene-AB11_RS20425;Dbxref=GenBank:WP_001098652.1;Name=WP_001098652.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AB11_RS20425;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098652.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 17301 18053 . - . ID=gene-AB11_RS20430;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AB11_RS20430;old_locus_tag=AB11_3888 NZ_JHDH01000152.1 Protein Homology CDS 17301 18053 . - 0 ID=cds-WP_000686620.1;Parent=gene-AB11_RS20430;Dbxref=GenBank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AB11_RS20430;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 18061 20103 . - . ID=gene-AB11_RS20435;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AB11_RS20435;old_locus_tag=AB11_3889 NZ_JHDH01000152.1 Protein Homology CDS 18061 20103 . - 0 ID=cds-WP_001298719.1;Parent=gene-AB11_RS20435;Dbxref=GenBank:WP_001298719.1;Name=WP_001298719.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AB11_RS20435;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 20306 21148 . + . ID=gene-AB11_RS20440;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AB11_RS20440;old_locus_tag=AB11_3890 NZ_JHDH01000152.1 Protein Homology CDS 20306 21148 . + 0 ID=cds-WP_032223949.1;Parent=gene-AB11_RS20440;Dbxref=GenBank:WP_032223949.1;Name=WP_032223949.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=AB11_RS20440;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_032223949.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 21220 22572 . + . ID=gene-AB11_RS20445;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AB11_RS20445;old_locus_tag=AB11_3891 NZ_JHDH01000152.1 Protein Homology CDS 21220 22572 . + 0 ID=cds-WP_000160808.1;Parent=gene-AB11_RS20445;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AB11_RS20445;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 22626 22709 . - . ID=gene-AB11_RS20450;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB11_RS20450;old_locus_tag=AB11_3892 NZ_JHDH01000152.1 Protein Homology CDS 22626 22709 . - 0 ID=cds-WP_001295215.1-2;Parent=gene-AB11_RS20450;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AB11_RS20450;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 23680 24033 . + . ID=gene-AB11_RS20455;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB11_RS20455;old_locus_tag=AB11_3894 NZ_JHDH01000152.1 Protein Homology CDS 23680 24033 . + 0 ID=cds-WP_000008957.1-2;Parent=gene-AB11_RS20455;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB11_RS20455;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 24087 25376 . + . ID=gene-AB11_RS20460;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AB11_RS20460;old_locus_tag=AB11_3895 NZ_JHDH01000152.1 Protein Homology CDS 24087 25376 . + 0 ID=cds-WP_000922639.1;Parent=gene-AB11_RS20460;Dbxref=GenBank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB11_RS20460;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 25389 25814 . + . ID=gene-AB11_RS20465;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB11_RS20465;old_locus_tag=AB11_3896 NZ_JHDH01000152.1 Protein Homology CDS 25389 25814 . + 0 ID=cds-WP_000065769.1;Parent=gene-AB11_RS20465;Dbxref=GenBank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AB11_RS20465;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 26443 27666 . + . ID=gene-AB11_RS20470;Name=AB11_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20470;old_locus_tag=AB11_3898 NZ_JHDH01000152.1 Protein Homology CDS 26443 27666 . + 0 ID=cds-WP_000020596.1;Parent=gene-AB11_RS20470;Dbxref=GenBank:WP_000020596.1;Name=WP_000020596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=AB11_RS20470;product=hypothetical protein;protein_id=WP_000020596.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 27914 28480 . + . ID=gene-AB11_RS20475;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AB11_RS20475;old_locus_tag=AB11_3899 NZ_JHDH01000152.1 Protein Homology CDS 27914 28480 . + 0 ID=cds-WP_001057453.1;Parent=gene-AB11_RS20475;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AB11_RS20475;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 28636 29166 . + . ID=gene-AB11_RS20480;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AB11_RS20480;old_locus_tag=AB11_3900 NZ_JHDH01000152.1 Protein Homology CDS 28636 29166 . + 0 ID=cds-WP_000478619.1;Parent=gene-AB11_RS20480;Dbxref=GenBank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AB11_RS20480;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 29208 29855 . - . ID=gene-AB11_RS20485;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AB11_RS20485;old_locus_tag=AB11_3901 NZ_JHDH01000152.1 Protein Homology CDS 29208 29855 . - 0 ID=cds-WP_001296814.1;Parent=gene-AB11_RS20485;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AB11_RS20485;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 29919 30245 . - . ID=gene-AB11_RS20490;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AB11_RS20490;old_locus_tag=AB11_3902 NZ_JHDH01000152.1 Protein Homology CDS 29919 30245 . - 0 ID=cds-WP_001298717.1;Parent=gene-AB11_RS20490;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AB11_RS20490;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 30361 30693 . - . ID=gene-AB11_RS20495;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AB11_RS20495;old_locus_tag=AB11_3903 NZ_JHDH01000152.1 Protein Homology CDS 30361 30693 . - 0 ID=cds-WP_000756550.1;Parent=gene-AB11_RS20495;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AB11_RS20495;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 30948 31520 . + . ID=gene-AB11_RS20500;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AB11_RS20500;old_locus_tag=AB11_3904 NZ_JHDH01000152.1 Protein Homology CDS 30948 31520 . + 0 ID=cds-WP_000965672.1;Parent=gene-AB11_RS20500;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AB11_RS20500;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 32319 32846 . + . ID=gene-AB11_RS20505;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AB11_RS20505;old_locus_tag=AB11_3905 NZ_JHDH01000152.1 Protein Homology CDS 32319 32846 . + 0 ID=cds-WP_000576690.1;Parent=gene-AB11_RS20505;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AB11_RS20505;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 32847 33125 . - . ID=gene-AB11_RS20510;Name=AB11_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20510 NZ_JHDH01000152.1 Protein Homology CDS 32847 33125 . - 0 ID=cds-WP_001205329.1;Parent=gene-AB11_RS20510;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AB11_RS20510;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 33233 34342 . + . ID=gene-AB11_RS20515;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AB11_RS20515;old_locus_tag=AB11_3906 NZ_JHDH01000152.1 Protein Homology CDS 33233 34342 . + 0 ID=cds-WP_001340474.1;Parent=gene-AB11_RS20515;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AB11_RS20515;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 34367 37480 . + . ID=gene-AB11_RS20520;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AB11_RS20520;old_locus_tag=AB11_3907 NZ_JHDH01000152.1 Protein Homology CDS 34367 37480 . + 0 ID=cds-WP_000024872.1;Parent=gene-AB11_RS20520;Dbxref=GenBank:WP_000024872.1;Name=WP_000024872.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AB11_RS20520;product=multidrug efflux pump RND permease MdtF;protein_id=WP_000024872.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 37843 38571 . - . ID=gene-AB11_RS20525;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AB11_RS20525;old_locus_tag=AB11_3909 NZ_JHDH01000152.1 Protein Homology CDS 37843 38571 . - 0 ID=cds-WP_000149999.1;Parent=gene-AB11_RS20525;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AB11_RS20525;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 38939 39763 . - . ID=gene-AB11_RS20530;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AB11_RS20530;old_locus_tag=AB11_3910 NZ_JHDH01000152.1 Protein Homology CDS 38939 39763 . - 0 ID=cds-WP_001191059.1;Parent=gene-AB11_RS20530;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AB11_RS20530;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11 NZ_JHDH01000152.1 RefSeq gene 40133 41286 . - . ID=gene-AB11_RS20535;Name=AB11_RS20535;end_range=41286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20535;old_locus_tag=AB11_3911;partial=true NZ_JHDH01000152.1 Protein Homology CDS 40133 41286 . - 2 ID=cds-WP_001398393.1-2;Parent=gene-AB11_RS20535;Dbxref=GenBank:WP_001398393.1;Name=WP_001398393.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=41286,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB11_RS20535;partial=true;product=glutamate decarboxylase;protein_id=WP_001398393.1;transl_table=11 ##sequence-region NZ_JHDH01000153.1 1 53172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000153.1 RefSeq region 1 53172 . + . ID=NZ_JHDH01000153.1:1..53172;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000153.1 RefSeq gene 1 1284 . - . ID=gene-AB11_RS20540;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;locus_tag=AB11_RS20540;old_locus_tag=AB11_3912;partial=true;start_range=.,1 NZ_JHDH01000153.1 Protein Homology CDS 1 1284 . - 0 ID=cds-WP_032223954.1;Parent=gene-AB11_RS20540;Dbxref=GenBank:WP_032223954.1;Name=WP_032223954.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadA;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=AB11_RS20540;partial=true;product=glutamate decarboxylase;protein_id=WP_032223954.1;start_range=.,1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 1495 2892 . - . ID=gene-AB11_RS20545;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AB11_RS20545;old_locus_tag=AB11_3913 NZ_JHDH01000153.1 Protein Homology CDS 1495 2892 . - 0 ID=cds-WP_000784827.1;Parent=gene-AB11_RS20545;Dbxref=GenBank:WP_000784827.1;Name=WP_000784827.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417975.1;locus_tag=AB11_RS20545;product=cytochrome c peroxidase;protein_id=WP_000784827.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 3296 4945 . + . ID=gene-AB11_RS20550;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AB11_RS20550;old_locus_tag=AB11_3914 NZ_JHDH01000153.1 Protein Homology CDS 3296 4945 . + 0 ID=cds-WP_000934216.1;Parent=gene-AB11_RS20550;Dbxref=GenBank:WP_000934216.1;Name=WP_000934216.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312426.1;locus_tag=AB11_RS20550;product=alpha%2Calpha-trehalase;protein_id=WP_000934216.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 4996 5598 . - . ID=gene-AB11_RS20555;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AB11_RS20555;old_locus_tag=AB11_3915 NZ_JHDH01000153.1 Protein Homology CDS 4996 5598 . - 0 ID=cds-WP_001167676.1;Parent=gene-AB11_RS20555;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AB11_RS20555;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 6118 7017 . + . ID=gene-AB11_RS20560;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AB11_RS20560;old_locus_tag=AB11_3917 NZ_JHDH01000153.1 Protein Homology CDS 6118 7017 . + 0 ID=cds-WP_000357790.1;Parent=gene-AB11_RS20560;Dbxref=GenBank:WP_000357790.1;Name=WP_000357790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AB11_RS20560;product=LysR family transcriptional regulator;protein_id=WP_000357790.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 7066 8079 . + . ID=gene-AB11_RS20565;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AB11_RS20565;old_locus_tag=AB11_3918 NZ_JHDH01000153.1 Protein Homology CDS 7066 8079 . + 0 ID=cds-WP_000191237.1;Parent=gene-AB11_RS20565;Dbxref=GenBank:WP_000191237.1;Name=WP_000191237.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417979.1;locus_tag=AB11_RS20565;product=inner membrane protein YhjD;protein_id=WP_000191237.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 8490 9812 . + . ID=gene-AB11_RS20570;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AB11_RS20570;old_locus_tag=AB11_3919 NZ_JHDH01000153.1 Protein Homology CDS 8490 9812 . + 0 ID=cds-WP_001149003.1;Parent=gene-AB11_RS20570;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AB11_RS20570;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 9994 12054 . - . ID=gene-AB11_RS20575;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AB11_RS20575;old_locus_tag=AB11_3920 NZ_JHDH01000153.1 Protein Homology CDS 9994 12054 . - 0 ID=cds-WP_001414249.1;Parent=gene-AB11_RS20575;Dbxref=GenBank:WP_001414249.1;Name=WP_001414249.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AB11_RS20575;product=AsmA family protein;protein_id=WP_001414249.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 12124 12891 . - . ID=gene-AB11_RS20580;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AB11_RS20580;old_locus_tag=AB11_3921 NZ_JHDH01000153.1 Protein Homology CDS 12124 12891 . - 0 ID=cds-WP_001295219.1;Parent=gene-AB11_RS20580;Dbxref=GenBank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AB11_RS20580;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 13123 14052 . + . ID=gene-AB11_RS20585;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AB11_RS20585;old_locus_tag=AB11_3923 NZ_JHDH01000153.1 Protein Homology CDS 13123 14052 . + 0 ID=cds-WP_000037562.1;Parent=gene-AB11_RS20585;Dbxref=GenBank:WP_000037562.1;Name=WP_000037562.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AB11_RS20585;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037562.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 14148 15644 . - . ID=gene-AB11_RS20590;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AB11_RS20590;old_locus_tag=AB11_3924 NZ_JHDH01000153.1 Protein Homology CDS 14148 15644 . - 0 ID=cds-WP_001163141.1;Parent=gene-AB11_RS20590;Dbxref=GenBank:WP_001163141.1;Name=WP_001163141.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417984.1;locus_tag=AB11_RS20590;product=M16 family metallopeptidase;protein_id=WP_001163141.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 15865 17151 . - . ID=gene-AB11_RS20595;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AB11_RS20595;old_locus_tag=AB11_3925 NZ_JHDH01000153.1 Protein Homology CDS 15865 17151 . - 0 ID=cds-WP_000858214.1;Parent=gene-AB11_RS20595;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AB11_RS20595;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 17334 19322 . - . ID=gene-AB11_RS20600;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AB11_RS20600;old_locus_tag=AB11_3927 NZ_JHDH01000153.1 Protein Homology CDS 17334 19322 . - 0 ID=cds-WP_001266293.1;Parent=gene-AB11_RS20600;Dbxref=GenBank:WP_001266293.1;Name=WP_001266293.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AB11_RS20600;product=biofilm formation regulator HmsP;protein_id=WP_001266293.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 19404 22877 . - . ID=gene-AB11_RS20605;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AB11_RS20605;old_locus_tag=AB11_3928 NZ_JHDH01000153.1 Protein Homology CDS 19404 22877 . - 0 ID=cds-WP_001225124.1;Parent=gene-AB11_RS20605;Dbxref=GenBank:WP_001225124.1;Name=WP_001225124.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AB11_RS20605;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225124.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 22859 23965 . - . ID=gene-AB11_RS20610;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AB11_RS20610;old_locus_tag=AB11_3929 NZ_JHDH01000153.1 Protein Homology CDS 22859 23965 . - 0 ID=cds-WP_001311203.1;Parent=gene-AB11_RS20610;Dbxref=GenBank:WP_001311203.1;Name=WP_001311203.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417988.1;locus_tag=AB11_RS20610;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001311203.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 23972 26311 . - . ID=gene-AB11_RS20615;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AB11_RS20615;old_locus_tag=AB11_3930 NZ_JHDH01000153.1 Protein Homology CDS 23972 26311 . - 0 ID=cds-WP_000823624.1;Parent=gene-AB11_RS20615;Dbxref=GenBank:WP_000823624.1;Name=WP_000823624.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AB11_RS20615;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823624.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 26322 28811 . - . ID=gene-AB11_RS20620;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AB11_RS20620;old_locus_tag=AB11_3931 NZ_JHDH01000153.1 Protein Homology CDS 26322 28811 . - 0 ID=cds-WP_032223957.1;Parent=gene-AB11_RS20620;Dbxref=GenBank:WP_032223957.1;Name=WP_032223957.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005010408.1;locus_tag=AB11_RS20620;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_032223957.1;transl_table=11 NZ_JHDH01000153.1 RefSeq pseudogene 28804 29616 . + . ID=gene-AB11_RS20625;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=pseudogene;locus_tag=AB11_RS20625;old_locus_tag=AB11_3932;partial=true;pseudo=true;start_range=.,28804 NZ_JHDH01000153.1 Protein Homology CDS 28804 29616 . + 0 ID=cds-AB11_RS20625;Parent=gene-AB11_RS20625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AB11_RS20625;partial=true;product=cellulose biosynthesis protein BcsE;pseudo=true;start_range=.,28804;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 29613 29804 . + . ID=gene-AB11_RS20630;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AB11_RS20630;old_locus_tag=AB11_3933 NZ_JHDH01000153.1 Protein Homology CDS 29613 29804 . + 0 ID=cds-WP_000988308.1;Parent=gene-AB11_RS20630;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AB11_RS20630;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 29801 31480 . + . ID=gene-AB11_RS20635;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AB11_RS20635;old_locus_tag=AB11_3934 NZ_JHDH01000153.1 Protein Homology CDS 29801 31480 . + 0 ID=cds-WP_000191622.1;Parent=gene-AB11_RS20635;Dbxref=GenBank:WP_000191622.1;Name=WP_000191622.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AB11_RS20635;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191622.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 31567 31674 . - . ID=gene-AB11_RS20640;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AB11_RS20640 NZ_JHDH01000153.1 Protein Homology CDS 31567 31674 . - 0 ID=cds-WP_000141634.1;Parent=gene-AB11_RS20640;Dbxref=GenBank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AB11_RS20640;product=type I toxin-antitoxin system toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 32150 33421 . + . ID=gene-AB11_RS20645;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AB11_RS20645;old_locus_tag=AB11_3937 NZ_JHDH01000153.1 Protein Homology CDS 32150 33421 . + 0 ID=cds-WP_001295225.1;Parent=gene-AB11_RS20645;Dbxref=GenBank:WP_001295225.1;Name=WP_001295225.1;Ontology_term=GO:0003333;gbkey=CDS;gene=yhjV;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AB11_RS20645;product=aromatic amino acid transport family protein;protein_id=WP_001295225.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 33451 34455 . - . ID=gene-AB11_RS20650;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AB11_RS20650;old_locus_tag=AB11_3938 NZ_JHDH01000153.1 Protein Homology CDS 33451 34455 . - 0 ID=cds-WP_000107012.1;Parent=gene-AB11_RS20650;Dbxref=GenBank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AB11_RS20650;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107012.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 34452 35435 . - . ID=gene-AB11_RS20655;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AB11_RS20655;old_locus_tag=AB11_3939 NZ_JHDH01000153.1 Protein Homology CDS 34452 35435 . - 0 ID=cds-WP_001196486.1;Parent=gene-AB11_RS20655;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AB11_RS20655;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 35446 36348 . - . ID=gene-AB11_RS20660;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AB11_RS20660;old_locus_tag=AB11_3940 NZ_JHDH01000153.1 Protein Homology CDS 35446 36348 . - 0 ID=cds-WP_000084677.1;Parent=gene-AB11_RS20660;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AB11_RS20660;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 36358 37377 . - . ID=gene-AB11_RS20665;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AB11_RS20665;old_locus_tag=AB11_3941 NZ_JHDH01000153.1 Protein Homology CDS 36358 37377 . - 0 ID=cds-WP_000938855.1;Parent=gene-AB11_RS20665;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AB11_RS20665;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 37395 37622 . + . ID=gene-AB11_RS26100;Name=AB11_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26100 NZ_JHDH01000153.1 GeneMarkS-2+ CDS 37395 37622 . + 0 ID=cds-WP_001300936.1;Parent=gene-AB11_RS26100;Dbxref=GenBank:WP_001300936.1;Name=WP_001300936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS26100;product=hypothetical protein;protein_id=WP_001300936.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 37685 39292 . - . ID=gene-AB11_RS20670;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AB11_RS20670;old_locus_tag=AB11_3943 NZ_JHDH01000153.1 Protein Homology CDS 37685 39292 . - 0 ID=cds-WP_001222883.1;Parent=gene-AB11_RS20670;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AB11_RS20670;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 40035 40111 . - . ID=gene-AB11_RS20675;Name=AB11_RS20675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS20675;old_locus_tag=AB11_3945 NZ_JHDH01000153.1 tRNAscan-SE tRNA 40035 40111 . - . ID=rna-AB11_RS20675;Parent=gene-AB11_RS20675;anticodon=(pos:complement(40075..40077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS20675;product=tRNA-Pro NZ_JHDH01000153.1 tRNAscan-SE exon 40035 40111 . - . ID=exon-AB11_RS20675-1;Parent=rna-AB11_RS20675;anticodon=(pos:complement(40075..40077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS20675;product=tRNA-Pro NZ_JHDH01000153.1 RefSeq gene 40203 41894 . - . ID=gene-AB11_RS20680;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AB11_RS20680;old_locus_tag=AB11_3946 NZ_JHDH01000153.1 Protein Homology CDS 40203 41894 . - 0 ID=cds-WP_001269197.1;Parent=gene-AB11_RS20680;Dbxref=GenBank:WP_001269197.1;Name=WP_001269197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AB11_RS20680;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 42218 43426 . - . ID=gene-AB11_RS20685;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AB11_RS20685;old_locus_tag=AB11_3947 NZ_JHDH01000153.1 Protein Homology CDS 42218 43426 . - 0 ID=cds-WP_000189019.1;Parent=gene-AB11_RS20685;Dbxref=GenBank:WP_000189019.1;Name=WP_000189019.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AB11_RS20685;product=L-lactate MFS transporter;protein_id=WP_000189019.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 43655 44353 . - . ID=gene-AB11_RS20690;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AB11_RS20690;old_locus_tag=AB11_3948 NZ_JHDH01000153.1 Protein Homology CDS 43655 44353 . - 0 ID=cds-WP_001299523.1;Parent=gene-AB11_RS20690;Dbxref=GenBank:WP_001299523.1;Name=WP_001299523.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418004.4;locus_tag=AB11_RS20690;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001299523.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 44511 45074 . + . ID=gene-AB11_RS20695;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AB11_RS20695;old_locus_tag=AB11_3949 NZ_JHDH01000153.1 Protein Homology CDS 44511 45074 . + 0 ID=cds-WP_000438957.1;Parent=gene-AB11_RS20695;Dbxref=GenBank:WP_000438957.1;Name=WP_000438957.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AB11_RS20695;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438957.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 45071 45511 . + . ID=gene-AB11_RS20700;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AB11_RS20700;old_locus_tag=AB11_3950 NZ_JHDH01000153.1 Protein Homology CDS 45071 45511 . + 0 ID=cds-WP_000617473.1;Parent=gene-AB11_RS20700;Dbxref=GenBank:WP_000617473.1;Name=WP_000617473.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418006.1;locus_tag=AB11_RS20700;product=N-acetyltransferase;protein_id=WP_000617473.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 45480 47813 . - . ID=gene-AB11_RS20705;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AB11_RS20705;old_locus_tag=AB11_3951 NZ_JHDH01000153.1 Protein Homology CDS 45480 47813 . - 0 ID=cds-WP_000013950.1;Parent=gene-AB11_RS20705;Dbxref=GenBank:WP_000013950.1;Name=WP_000013950.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AB11_RS20705;product=biotin sulfoxide reductase;protein_id=WP_000013950.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 47966 48625 . + . ID=gene-AB11_RS20710;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AB11_RS20710;old_locus_tag=AB11_3952 NZ_JHDH01000153.1 Protein Homology CDS 47966 48625 . + 0 ID=cds-WP_000747625.1;Parent=gene-AB11_RS20710;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AB11_RS20710;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 48729 49703 . + . ID=gene-AB11_RS20715;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AB11_RS20715;old_locus_tag=AB11_3953 NZ_JHDH01000153.1 Protein Homology CDS 48729 49703 . + 0 ID=cds-WP_000805038.1;Parent=gene-AB11_RS20715;Dbxref=GenBank:WP_000805038.1;Name=WP_000805038.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418009.2;locus_tag=AB11_RS20715;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805038.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 49753 50463 . - . ID=gene-AB11_RS20720;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AB11_RS20720;old_locus_tag=AB11_3954 NZ_JHDH01000153.1 Protein Homology CDS 49753 50463 . - 0 ID=cds-WP_000190516.1;Parent=gene-AB11_RS20720;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AB11_RS20720;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 50897 51187 . + . ID=gene-AB11_RS20725;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AB11_RS20725;old_locus_tag=AB11_3955 NZ_JHDH01000153.1 Protein Homology CDS 50897 51187 . + 0 ID=cds-WP_000455798.1;Parent=gene-AB11_RS20725;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AB11_RS20725;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 51468 51680 . + . ID=gene-AB11_RS20730;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB11_RS20730;old_locus_tag=AB11_3956 NZ_JHDH01000153.1 Protein Homology CDS 51468 51680 . + 0 ID=cds-WP_000014594.1;Parent=gene-AB11_RS20730;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AB11_RS20730;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 51819 51890 . + . ID=gene-AB11_RS25385;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=AB11_RS25385 NZ_JHDH01000153.1 Protein Homology CDS 51819 51890 . + 0 ID=cds-WP_211180513.1;Parent=gene-AB11_RS25385;Dbxref=GenBank:WP_211180513.1;Name=WP_211180513.1;gbkey=CDS;gene=ysaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AB11_RS25385;product=protein YsaE;protein_id=WP_211180513.1;transl_table=11 NZ_JHDH01000153.1 RefSeq gene 51867 52019 . - . ID=gene-AB11_RS20735;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AB11_RS20735;old_locus_tag=AB11_3957 NZ_JHDH01000153.1 Protein Homology CDS 51867 52019 . - 0 ID=cds-WP_001135732.1;Parent=gene-AB11_RS20735;Dbxref=GenBank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AB11_RS20735;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11 NZ_JHDH01000153.1 RefSeq pseudogene 52099 53172 . + . ID=gene-AB11_RS20740;Name=AB11_RS20740;end_range=53172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20740;partial=true;pseudo=true NZ_JHDH01000153.1 Protein Homology CDS 52099 53172 . + 0 ID=cds-AB11_RS20740;Parent=gene-AB11_RS20740;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=53172,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS20740;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000154.1 1 46152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000154.1 RefSeq region 1 46152 . + . ID=NZ_JHDH01000154.1:1..46152;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000154.1 RefSeq pseudogene 1 487 . - . ID=gene-AB11_RS20745;Name=AB11_RS20745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20745;old_locus_tag=AB11_3960;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000154.1 Protein Homology CDS 1 487 . - 0 ID=cds-AB11_RS20745;Parent=gene-AB11_RS20745;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AB11_RS20745;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000154.1 RefSeq pseudogene 572 829 . + . ID=gene-AB11_RS20750;Name=AB11_RS20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20750;old_locus_tag=AB11_3961;partial=true;pseudo=true;start_range=.,572 NZ_JHDH01000154.1 Protein Homology CDS 572 829 . + 0 ID=cds-AB11_RS20750;Parent=gene-AB11_RS20750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS20750;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,572;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 1108 3177 . - . ID=gene-AB11_RS20755;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AB11_RS20755;old_locus_tag=AB11_3962 NZ_JHDH01000154.1 Protein Homology CDS 1108 3177 . - 0 ID=cds-WP_001291772.1;Parent=gene-AB11_RS20755;Dbxref=GenBank:WP_001291772.1;Name=WP_001291772.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AB11_RS20755;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 3187 4098 . - . ID=gene-AB11_RS20760;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AB11_RS20760;old_locus_tag=AB11_3963 NZ_JHDH01000154.1 Protein Homology CDS 3187 4098 . - 0 ID=cds-WP_001168544.1;Parent=gene-AB11_RS20760;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AB11_RS20760;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 4193 4492 . - . ID=gene-AB11_RS20765;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AB11_RS20765;old_locus_tag=AB11_3964 NZ_JHDH01000154.1 Protein Homology CDS 4193 4492 . - 0 ID=cds-WP_000980107.1;Parent=gene-AB11_RS20765;Dbxref=GenBank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AB11_RS20765;product=YsaB family lipoprotein;protein_id=WP_000980107.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 4667 5662 . + . ID=gene-AB11_RS20770;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AB11_RS20770;old_locus_tag=AB11_3965 NZ_JHDH01000154.1 Protein Homology CDS 4667 5662 . + 0 ID=cds-WP_001645927.1;Parent=gene-AB11_RS20770;Dbxref=GenBank:WP_001645927.1;Name=WP_001645927.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418018.1;locus_tag=AB11_RS20770;product=O-acetyltransferase WecH;protein_id=WP_001645927.1;transl_table=11 NZ_JHDH01000154.1 RefSeq pseudogene 5704 6140 . - . ID=gene-AB11_RS20775;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=pseudogene;locus_tag=AB11_RS20775;old_locus_tag=AB11_3966;pseudo=true NZ_JHDH01000154.1 Protein Homology CDS 5704 6140 . - 0 ID=cds-AB11_RS20775;Parent=gene-AB11_RS20775;Note=frameshifted;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AB11_RS20775;product=inner membrane protein YiaA;pseudo=true;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 6186 6527 . - . ID=gene-AB11_RS20780;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AB11_RS20780;old_locus_tag=AB11_3967 NZ_JHDH01000154.1 Protein Homology CDS 6186 6527 . - 0 ID=cds-WP_001295228.1;Parent=gene-AB11_RS20780;Dbxref=GenBank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AB11_RS20780;product=inner membrane protein YiaB;protein_id=WP_001295228.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 6696 8150 . - . ID=gene-AB11_RS20785;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AB11_RS20785;old_locus_tag=AB11_3968 NZ_JHDH01000154.1 Protein Homology CDS 6696 8150 . - 0 ID=cds-WP_000275334.1;Parent=gene-AB11_RS20785;Dbxref=GenBank:WP_000275334.1;Name=WP_000275334.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AB11_RS20785;product=xylulokinase;protein_id=WP_000275334.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 8222 9544 . - . ID=gene-AB11_RS20790;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AB11_RS20790;old_locus_tag=AB11_3969 NZ_JHDH01000154.1 Protein Homology CDS 8222 9544 . - 0 ID=cds-WP_001149591.1;Parent=gene-AB11_RS20790;Dbxref=GenBank:WP_001149591.1;Name=WP_001149591.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418022.1;locus_tag=AB11_RS20790;product=xylose isomerase;protein_id=WP_001149591.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 9910 10902 . + . ID=gene-AB11_RS20795;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AB11_RS20795;old_locus_tag=AB11_3970 NZ_JHDH01000154.1 Protein Homology CDS 9910 10902 . + 0 ID=cds-WP_000694881.1;Parent=gene-AB11_RS20795;Dbxref=GenBank:WP_000694881.1;Name=WP_000694881.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AB11_RS20795;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_000694881.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 10980 12521 . + . ID=gene-AB11_RS20800;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AB11_RS20800;old_locus_tag=AB11_3971 NZ_JHDH01000154.1 Protein Homology CDS 10980 12521 . + 0 ID=cds-WP_001146479.1;Parent=gene-AB11_RS20800;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AB11_RS20800;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 12499 13680 . + . ID=gene-AB11_RS20805;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AB11_RS20805;old_locus_tag=AB11_3972 NZ_JHDH01000154.1 Protein Homology CDS 12499 13680 . + 0 ID=cds-WP_000045978.1;Parent=gene-AB11_RS20805;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AB11_RS20805;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 13758 14936 . + . ID=gene-AB11_RS20810;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AB11_RS20810;old_locus_tag=AB11_3973 NZ_JHDH01000154.1 Protein Homology CDS 13758 14936 . + 0 ID=cds-WP_000494484.1;Parent=gene-AB11_RS20810;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AB11_RS20810;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 15132 15956 . - . ID=gene-AB11_RS20815;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AB11_RS20815;old_locus_tag=AB11_3974 NZ_JHDH01000154.1 Protein Homology CDS 15132 15956 . - 0 ID=cds-WP_001297957.1;Parent=gene-AB11_RS20815;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AB11_RS20815;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 16276 18306 . + . ID=gene-AB11_RS20820;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AB11_RS20820;old_locus_tag=AB11_3976 NZ_JHDH01000154.1 Protein Homology CDS 16276 18306 . + 0 ID=cds-WP_000761225.1;Parent=gene-AB11_RS20820;Dbxref=GenBank:WP_000761225.1;Name=WP_000761225.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AB11_RS20820;product=alpha-amylase;protein_id=WP_000761225.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 18484 19737 . + . ID=gene-AB11_RS20825;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AB11_RS20825;old_locus_tag=AB11_3977 NZ_JHDH01000154.1 Protein Homology CDS 18484 19737 . + 0 ID=cds-WP_032174837.1;Parent=gene-AB11_RS20825;Dbxref=GenBank:WP_032174837.1;Name=WP_032174837.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AB11_RS20825;product=valine--pyruvate transaminase;protein_id=WP_032174837.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 19888 20361 . - . ID=gene-AB11_RS20830;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AB11_RS20830;old_locus_tag=AB11_3978 NZ_JHDH01000154.1 Protein Homology CDS 19888 20361 . - 0 ID=cds-WP_021570984.1;Parent=gene-AB11_RS20830;Dbxref=GenBank:WP_021570984.1;Name=WP_021570984.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418030.1;locus_tag=AB11_RS20830;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_021570984.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 20463 21311 . - . ID=gene-AB11_RS20835;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AB11_RS20835;old_locus_tag=AB11_3979 NZ_JHDH01000154.1 Protein Homology CDS 20463 21311 . - 0 ID=cds-WP_000514240.1;Parent=gene-AB11_RS20835;Dbxref=GenBank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AB11_RS20835;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514240.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 21512 22510 . + . ID=gene-AB11_RS20840;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AB11_RS20840;old_locus_tag=AB11_3980 NZ_JHDH01000154.1 Protein Homology CDS 21512 22510 . + 0 ID=cds-WP_001388653.1;Parent=gene-AB11_RS20840;Dbxref=GenBank:WP_001388653.1;Name=WP_001388653.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709360.1;locus_tag=AB11_RS20840;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_001388653.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 22522 22989 . + . ID=gene-AB11_RS20845;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AB11_RS20845;old_locus_tag=AB11_3981 NZ_JHDH01000154.1 Protein Homology CDS 22522 22989 . + 0 ID=cds-WP_000576071.1;Parent=gene-AB11_RS20845;Dbxref=GenBank:WP_000576071.1;Name=WP_000576071.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AB11_RS20845;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576071.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 23107 23580 . + . ID=gene-AB11_RS20850;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AB11_RS20850;old_locus_tag=AB11_3982 NZ_JHDH01000154.1 Protein Homology CDS 23107 23580 . + 0 ID=cds-WP_000721664.1;Parent=gene-AB11_RS20850;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AB11_RS20850;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 23583 24860 . + . ID=gene-AB11_RS20855;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AB11_RS20855;old_locus_tag=AB11_3983 NZ_JHDH01000154.1 Protein Homology CDS 23583 24860 . + 0 ID=cds-WP_001514644.1;Parent=gene-AB11_RS20855;Dbxref=GenBank:WP_001514644.1;Name=WP_001514644.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AB11_RS20855;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_001514644.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 24873 25859 . + . ID=gene-AB11_RS20860;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AB11_RS20860;old_locus_tag=AB11_3984 NZ_JHDH01000154.1 Protein Homology CDS 24873 25859 . + 0 ID=cds-WP_000776887.1;Parent=gene-AB11_RS20860;Dbxref=GenBank:WP_000776887.1;Name=WP_000776887.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AB11_RS20860;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000776887.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 25863 27359 . + . ID=gene-AB11_RS20865;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AB11_RS20865;old_locus_tag=AB11_3985 NZ_JHDH01000154.1 Protein Homology CDS 25863 27359 . + 0 ID=cds-WP_001514645.1;Parent=gene-AB11_RS20865;Dbxref=GenBank:WP_001514645.1;Name=WP_001514645.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AB11_RS20865;product=L-xylulokinase;protein_id=WP_001514645.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 27356 28018 . + . ID=gene-AB11_RS20870;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB11_RS20870;old_locus_tag=AB11_3986 NZ_JHDH01000154.1 Protein Homology CDS 27356 28018 . + 0 ID=cds-WP_000089497.1;Parent=gene-AB11_RS20870;Dbxref=GenBank:WP_000089497.1;Name=WP_000089497.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AB11_RS20870;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089497.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 28011 28871 . + . ID=gene-AB11_RS20875;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AB11_RS20875;old_locus_tag=AB11_3987 NZ_JHDH01000154.1 Protein Homology CDS 28011 28871 . + 0 ID=cds-WP_001296811.1;Parent=gene-AB11_RS20875;Dbxref=GenBank:WP_001296811.1;Name=WP_001296811.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AB11_RS20875;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001296811.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 28865 29560 . + . ID=gene-AB11_RS20880;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB11_RS20880;old_locus_tag=AB11_3988 NZ_JHDH01000154.1 Protein Homology CDS 28865 29560 . + 0 ID=cds-WP_000893119.1;Parent=gene-AB11_RS20880;Dbxref=GenBank:WP_000893119.1;Name=WP_000893119.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AB11_RS20880;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893119.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 29592 30407 . - . ID=gene-AB11_RS20885;Name=AB11_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20885;old_locus_tag=AB11_3989 NZ_JHDH01000154.1 Protein Homology CDS 29592 30407 . - 0 ID=cds-WP_021570986.1;Parent=gene-AB11_RS20885;Dbxref=GenBank:WP_021570986.1;Name=WP_021570986.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AB11_RS20885;product=AraC family transcriptional regulator;protein_id=WP_021570986.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 30633 32033 . + . ID=gene-AB11_RS20890;Name=AB11_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20890;old_locus_tag=AB11_3990 NZ_JHDH01000154.1 Protein Homology CDS 30633 32033 . + 0 ID=cds-WP_000204810.1;Parent=gene-AB11_RS20890;Dbxref=GenBank:WP_000204810.1;Name=WP_000204810.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312485.1;locus_tag=AB11_RS20890;product=MFS transporter;protein_id=WP_000204810.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 32044 34023 . + . ID=gene-AB11_RS20895;Name=AB11_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20895;old_locus_tag=AB11_3991 NZ_JHDH01000154.1 Protein Homology CDS 32044 34023 . + 0 ID=cds-WP_001026900.1;Parent=gene-AB11_RS20895;Dbxref=GenBank:WP_001026900.1;Name=WP_001026900.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003581012.1;locus_tag=AB11_RS20895;product=glycoside hydrolase family 127 protein;protein_id=WP_001026900.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 34144 34884 . - . ID=gene-AB11_RS20900;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AB11_RS20900;old_locus_tag=AB11_3992 NZ_JHDH01000154.1 Protein Homology CDS 34144 34884 . - 0 ID=cds-WP_000906806.1;Parent=gene-AB11_RS20900;Dbxref=GenBank:WP_000906806.1;Name=WP_000906806.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=AB11_RS20900;product=MipA/OmpV family protein;protein_id=WP_000906806.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 35008 35982 . + . ID=gene-AB11_RS20905;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AB11_RS20905;old_locus_tag=AB11_3993 NZ_JHDH01000154.1 Protein Homology CDS 35008 35982 . + 0 ID=cds-WP_000164034.1;Parent=gene-AB11_RS20905;Dbxref=GenBank:WP_000164034.1;Name=WP_000164034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=AB11_RS20905;product=LysR family transcriptional regulator;protein_id=WP_000164034.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 35979 37115 . - . ID=gene-AB11_RS20910;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AB11_RS20910;old_locus_tag=AB11_3994 NZ_JHDH01000154.1 Protein Homology CDS 35979 37115 . - 0 ID=cds-WP_000364883.1;Parent=gene-AB11_RS20910;Dbxref=GenBank:WP_000364883.1;Name=WP_000364883.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AB11_RS20910;product=HlyD family secretion protein;protein_id=WP_000364883.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 37121 37444 . - . ID=gene-AB11_RS20915;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AB11_RS20915;old_locus_tag=AB11_3995 NZ_JHDH01000154.1 Protein Homology CDS 37121 37444 . - 0 ID=cds-WP_000478193.1;Parent=gene-AB11_RS20915;Dbxref=GenBank:WP_000478193.1;Name=WP_000478193.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AB11_RS20915;product=DUF3302 domain-containing protein;protein_id=WP_000478193.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 37627 37770 . + . ID=gene-AB11_RS20920;Name=AB11_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20920;old_locus_tag=AB11_3996 NZ_JHDH01000154.1 GeneMarkS-2+ CDS 37627 37770 . + 0 ID=cds-WP_001066080.1;Parent=gene-AB11_RS20920;Dbxref=GenBank:WP_001066080.1;Name=WP_001066080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS20920;product=hypothetical protein;protein_id=WP_001066080.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 37989 39527 . - . ID=gene-AB11_RS20925;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AB11_RS20925;old_locus_tag=AB11_3997 NZ_JHDH01000154.1 Protein Homology CDS 37989 39527 . - 0 ID=cds-WP_000183976.1;Parent=gene-AB11_RS20925;Dbxref=GenBank:WP_000183976.1;Name=WP_000183976.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AB11_RS20925;product=aldehyde dehydrogenase AldB;protein_id=WP_000183976.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 39692 40843 . - . ID=gene-AB11_RS20930;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AB11_RS20930;old_locus_tag=AB11_3998 NZ_JHDH01000154.1 Protein Homology CDS 39692 40843 . - 0 ID=cds-WP_000168700.1;Parent=gene-AB11_RS20930;Dbxref=GenBank:WP_000168700.1;Name=WP_000168700.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=AB11_RS20930;product=L-threonine dehydrogenase;protein_id=WP_000168700.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 41033 42877 . - . ID=gene-AB11_RS20935;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AB11_RS20935;old_locus_tag=AB11_3999 NZ_JHDH01000154.1 Protein Homology CDS 41033 42877 . - 0 ID=cds-WP_032223968.1;Parent=gene-AB11_RS20935;Dbxref=GenBank:WP_032223968.1;Name=WP_032223968.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AB11_RS20935;product=selenocysteine-specific translation elongation factor;protein_id=WP_032223968.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 42874 44265 . - . ID=gene-AB11_RS20940;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AB11_RS20940;old_locus_tag=AB11_4000 NZ_JHDH01000154.1 Protein Homology CDS 42874 44265 . - 0 ID=cds-WP_001739693.1;Parent=gene-AB11_RS20940;Dbxref=GenBank:WP_001739693.1;Name=WP_001739693.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AB11_RS20940;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_001739693.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 44363 44971 . - . ID=gene-AB11_RS20945;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AB11_RS20945;old_locus_tag=AB11_4001 NZ_JHDH01000154.1 Protein Homology CDS 44363 44971 . - 0 ID=cds-WP_000779792.1;Parent=gene-AB11_RS20945;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AB11_RS20945;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JHDH01000154.1 RefSeq gene 45200 46152 . + . ID=gene-AB11_RS20950;Name=AB11_RS20950;end_range=46152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20950;old_locus_tag=AB11_4003;partial=true NZ_JHDH01000154.1 Protein Homology CDS 45200 46152 . + 0 ID=cds-WP_001399548.1-2;Parent=gene-AB11_RS20950;Dbxref=GenBank:WP_001399548.1;Name=WP_001399548.1;end_range=46152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB11_RS20950;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001399548.1;transl_table=11 ##sequence-region NZ_JHDH01000155.1 1 14821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000155.1 RefSeq region 1 14821 . + . ID=NZ_JHDH01000155.1:1..14821;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000155.1 RefSeq gene 1 1207 . + . ID=gene-AB11_RS20955;Name=AB11_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS20955;old_locus_tag=AB11_4004;partial=true;start_range=.,1 NZ_JHDH01000155.1 Protein Homology CDS 1 1207 . + 1 ID=cds-WP_205957711.1;Parent=gene-AB11_RS20955;Dbxref=GenBank:WP_205957711.1;Name=WP_205957711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB11_RS20955;partial=true;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_205957711.1;start_range=.,1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 1228 2070 . + . ID=gene-AB11_RS20960;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AB11_RS20960;old_locus_tag=AB11_4005 NZ_JHDH01000155.1 Protein Homology CDS 1228 2070 . + 0 ID=cds-WP_000072850.1;Parent=gene-AB11_RS20960;Dbxref=GenBank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AB11_RS20960;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11 NZ_JHDH01000155.1 RefSeq pseudogene 2100 3056 . + . ID=gene-AB11_RS20965;Name=AB11_RS20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20965;old_locus_tag=AB11_4006;partial=true;pseudo=true;start_range=.,2100 NZ_JHDH01000155.1 Protein Homology CDS 2100 3056 . + 0 ID=cds-AB11_RS20965;Parent=gene-AB11_RS20965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=AB11_RS20965;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2100;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 3068 3529 . + . ID=gene-AB11_RS20970;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AB11_RS20970 NZ_JHDH01000155.1 Protein Homology CDS 3068 3529 . + 0 ID=cds-WP_000642489.1;Parent=gene-AB11_RS20970;Dbxref=GenBank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AB11_RS20970;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11 NZ_JHDH01000155.1 RefSeq pseudogene 3563 3781 . + . ID=gene-AB11_RS26105;Name=AB11_RS26105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26105;partial=true;pseudo=true;start_range=.,3563 NZ_JHDH01000155.1 Protein Homology CDS 3563 3781 . + 0 ID=cds-AB11_RS26105;Parent=gene-AB11_RS26105;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235166.1;locus_tag=AB11_RS26105;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3563;transl_table=11 NZ_JHDH01000155.1 RefSeq pseudogene 4153 4673 . + . ID=gene-AB11_RS20975;Name=AB11_RS20975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS20975;pseudo=true NZ_JHDH01000155.1 Protein Homology CDS 4153 4673 . + 0 ID=cds-AB11_RS20975;Parent=gene-AB11_RS20975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AB11_RS20975;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 5133 6269 . - . ID=gene-AB11_RS20980;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AB11_RS20980;old_locus_tag=AB11_4007 NZ_JHDH01000155.1 Protein Homology CDS 5133 6269 . - 0 ID=cds-WP_000364939.1;Parent=gene-AB11_RS20980;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AB11_RS20980;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 6272 6634 . - . ID=gene-AB11_RS20985;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AB11_RS20985;old_locus_tag=AB11_4008 NZ_JHDH01000155.1 Protein Homology CDS 6272 6634 . - 0 ID=cds-WP_000479624.1;Parent=gene-AB11_RS20985;Dbxref=GenBank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=AB11_RS20985;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 7171 9084 . + . ID=gene-AB11_RS20990;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AB11_RS20990;old_locus_tag=AB11_4009 NZ_JHDH01000155.1 Protein Homology CDS 7171 9084 . + 0 ID=cds-WP_000093247.1;Parent=gene-AB11_RS20990;Dbxref=GenBank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=AB11_RS20990;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 9314 10462 . + . ID=gene-AB11_RS20995;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AB11_RS20995;old_locus_tag=AB11_4010 NZ_JHDH01000155.1 Protein Homology CDS 9314 10462 . + 0 ID=cds-WP_000645420.1;Parent=gene-AB11_RS20995;Dbxref=GenBank:WP_000645420.1;Name=WP_000645420.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AB11_RS20995;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645420.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 10462 11049 . + . ID=gene-AB11_RS21000;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AB11_RS21000;old_locus_tag=AB11_4011 NZ_JHDH01000155.1 Protein Homology CDS 10462 11049 . + 0 ID=cds-WP_000228269.1;Parent=gene-AB11_RS21000;Dbxref=GenBank:WP_000228269.1;Name=WP_000228269.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AB11_RS21000;product=mannitol operon repressor MtlR;protein_id=WP_000228269.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 11061 11270 . - . ID=gene-AB11_RS21005;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AB11_RS21005;old_locus_tag=AB11_4012 NZ_JHDH01000155.1 Protein Homology CDS 11061 11270 . - 0 ID=cds-WP_000517100.1;Parent=gene-AB11_RS21005;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AB11_RS21005;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 11555 11917 . + . ID=gene-AB11_RS21010;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AB11_RS21010;old_locus_tag=AB11_4013 NZ_JHDH01000155.1 Protein Homology CDS 11555 11917 . + 0 ID=cds-WP_000665676.1;Parent=gene-AB11_RS21010;Dbxref=GenBank:WP_000665676.1;Name=WP_000665676.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AB11_RS21010;product=YibL family ribosome-associated protein;protein_id=WP_000665676.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 12461 13144 . + . ID=gene-AB11_RS21015;Name=AB11_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21015;old_locus_tag=AB11_4015 NZ_JHDH01000155.1 Protein Homology CDS 12461 13144 . + 0 ID=cds-WP_032223975.1;Parent=gene-AB11_RS21015;Dbxref=GenBank:WP_032223975.1;Name=WP_032223975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1;locus_tag=AB11_RS21015;product=DUF3251 domain-containing protein;protein_id=WP_032223975.1;transl_table=11 NZ_JHDH01000155.1 RefSeq gene 13188 14821 . + . ID=gene-AB11_RS21020;Name=AB11_RS21020;end_range=14821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21020;old_locus_tag=AB11_4016;partial=true NZ_JHDH01000155.1 Protein Homology CDS 13188 14821 . + 0 ID=cds-WP_032223978.1;Parent=gene-AB11_RS21020;Dbxref=GenBank:WP_032223978.1;Name=WP_032223978.1;end_range=14821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS21020;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_032223978.1;transl_table=11 ##sequence-region NZ_JHDH01000156.1 1 63712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000156.1 RefSeq region 1 63712 . + . ID=NZ_JHDH01000156.1:1..63712;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000156.1 RefSeq pseudogene 1 2496 . + . ID=gene-AB11_RS21025;Name=ehaG;gbkey=Gene;gene=ehaG;gene_biotype=pseudogene;locus_tag=AB11_RS21025;old_locus_tag=AB11_4017;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000156.1 Protein Homology CDS 1 2496 . + 0 ID=cds-AB11_RS21025;Parent=gene-AB11_RS21025;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ehaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB11_RS21025;partial=true;product=trimeric autotransporter adhesin EhaG;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 2923 4578 . + . ID=gene-AB11_RS21030;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AB11_RS21030;old_locus_tag=AB11_4018 NZ_JHDH01000156.1 Protein Homology CDS 2923 4578 . + 0 ID=cds-WP_001295233.1;Parent=gene-AB11_RS21030;Dbxref=GenBank:WP_001295233.1;Name=WP_001295233.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418060.1;locus_tag=AB11_RS21030;product=L-lactate permease;protein_id=WP_001295233.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 4578 5354 . + . ID=gene-AB11_RS21035;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AB11_RS21035;old_locus_tag=AB11_4019 NZ_JHDH01000156.1 Protein Homology CDS 4578 5354 . + 0 ID=cds-WP_000636500.1;Parent=gene-AB11_RS21035;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AB11_RS21035;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 5351 6541 . + . ID=gene-AB11_RS21040;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AB11_RS21040;old_locus_tag=AB11_4020 NZ_JHDH01000156.1 Protein Homology CDS 5351 6541 . + 0 ID=cds-WP_000586962.1;Parent=gene-AB11_RS21040;Dbxref=GenBank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AB11_RS21040;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 6695 7168 . + . ID=gene-AB11_RS21045;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AB11_RS21045;old_locus_tag=AB11_4021 NZ_JHDH01000156.1 Protein Homology CDS 6695 7168 . + 0 ID=cds-WP_000932344.1;Parent=gene-AB11_RS21045;Dbxref=GenBank:WP_000932344.1;Name=WP_000932344.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312511.1;locus_tag=AB11_RS21045;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932344.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 7221 8042 . - . ID=gene-AB11_RS21050;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AB11_RS21050;old_locus_tag=AB11_4022 NZ_JHDH01000156.1 Protein Homology CDS 7221 8042 . - 0 ID=cds-WP_001277561.1;Parent=gene-AB11_RS21050;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AB11_RS21050;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 8122 9141 . - . ID=gene-AB11_RS21055;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AB11_RS21055;old_locus_tag=AB11_4023 NZ_JHDH01000156.1 Protein Homology CDS 8122 9141 . - 0 ID=cds-WP_001076194.1;Parent=gene-AB11_RS21055;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AB11_RS21055;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 9141 9608 . - . ID=gene-AB11_RS21060;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AB11_RS21060;old_locus_tag=AB11_4024 NZ_JHDH01000156.1 Protein Homology CDS 9141 9608 . - 0 ID=cds-WP_000003377.1;Parent=gene-AB11_RS21060;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AB11_RS21060;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 9671 9922 . - . ID=gene-AB11_RS21065;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AB11_RS21065;old_locus_tag=AB11_4025 NZ_JHDH01000156.1 Protein Homology CDS 9671 9922 . - 0 ID=cds-WP_000024392.1;Parent=gene-AB11_RS21065;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AB11_RS21065;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 10064 10495 . - . ID=gene-AB11_RS21070;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AB11_RS21070;old_locus_tag=AB11_4026 NZ_JHDH01000156.1 Protein Homology CDS 10064 10495 . - 0 ID=cds-WP_001156181.1;Parent=gene-AB11_RS21070;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AB11_RS21070;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 10740 12284 . + . ID=gene-AB11_RS21075;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AB11_RS21075;old_locus_tag=AB11_4027 NZ_JHDH01000156.1 Protein Homology CDS 10740 12284 . + 0 ID=cds-WP_001350558.1;Parent=gene-AB11_RS21075;Dbxref=GenBank:WP_001350558.1;Name=WP_001350558.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418069.1;locus_tag=AB11_RS21075;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001350558.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 12318 13577 . + . ID=gene-AB11_RS21080;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AB11_RS21080;old_locus_tag=AB11_4028 NZ_JHDH01000156.1 Protein Homology CDS 12318 13577 . + 0 ID=cds-WP_231371562.1;Parent=gene-AB11_RS21080;Dbxref=GenBank:WP_231371562.1;Name=WP_231371562.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AB11_RS21080;product=murein hydrolase activator EnvC;protein_id=WP_231371562.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 13581 14540 . + . ID=gene-AB11_RS21085;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AB11_RS21085;old_locus_tag=AB11_4029 NZ_JHDH01000156.1 Protein Homology CDS 13581 14540 . + 0 ID=cds-WP_000483847.1;Parent=gene-AB11_RS21085;Dbxref=GenBank:WP_000483847.1;Name=WP_000483847.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418071.4;locus_tag=AB11_RS21085;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483847.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 14527 15561 . - . ID=gene-AB11_RS21090;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AB11_RS21090;old_locus_tag=AB11_4030 NZ_JHDH01000156.1 Protein Homology CDS 14527 15561 . - 0 ID=cds-WP_000982115.1;Parent=gene-AB11_RS21090;Dbxref=GenBank:WP_000982115.1;Name=WP_000982115.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AB11_RS21090;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982115.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 15800 16825 . - . ID=gene-AB11_RS21095;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AB11_RS21095;old_locus_tag=AB11_4031 NZ_JHDH01000156.1 Protein Homology CDS 15800 16825 . - 0 ID=cds-WP_000646007.1;Parent=gene-AB11_RS21095;Dbxref=GenBank:WP_000646007.1;Name=WP_000646007.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AB11_RS21095;product=L-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 16835 18031 . - . ID=gene-AB11_RS21100;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AB11_RS21100;old_locus_tag=AB11_4032 NZ_JHDH01000156.1 Protein Homology CDS 16835 18031 . - 0 ID=cds-WP_001213834.1;Parent=gene-AB11_RS21100;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AB11_RS21100;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 18306 19163 . - . ID=gene-AB11_RS21105;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=AB11_RS21105;old_locus_tag=AB11_4033 NZ_JHDH01000156.1 Protein Homology CDS 18306 19163 . - 0 ID=cds-WP_000842823.1;Parent=gene-AB11_RS21105;Dbxref=GenBank:WP_000842823.1;Name=WP_000842823.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418075.2;locus_tag=AB11_RS21105;product=protein YibB;protein_id=WP_000842823.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 19467 20399 . + . ID=gene-AB11_RS21110;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AB11_RS21110;old_locus_tag=AB11_4034 NZ_JHDH01000156.1 Protein Homology CDS 19467 20399 . + 0 ID=cds-WP_000587764.1;Parent=gene-AB11_RS21110;Dbxref=GenBank:WP_000587764.1;Name=WP_000587764.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AB11_RS21110;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587764.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 20409 21455 . + . ID=gene-AB11_RS21115;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AB11_RS21115;old_locus_tag=AB11_4035 NZ_JHDH01000156.1 Protein Homology CDS 20409 21455 . + 0 ID=cds-WP_000699219.1;Parent=gene-AB11_RS21115;Dbxref=GenBank:WP_000699219.1;Name=WP_000699219.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AB11_RS21115;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699219.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 21459 22418 . + . ID=gene-AB11_RS21120;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AB11_RS21120;old_locus_tag=AB11_4036 NZ_JHDH01000156.1 Protein Homology CDS 21459 22418 . + 0 ID=cds-WP_001264584.1;Parent=gene-AB11_RS21120;Dbxref=GenBank:WP_001264584.1;Name=WP_001264584.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418078.1;locus_tag=AB11_RS21120;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264584.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 22428 23687 . + . ID=gene-AB11_RS21125;Name=waaL;gbkey=Gene;gene=waaL;gene_biotype=protein_coding;gene_synonym=rfaL;locus_tag=AB11_RS21125;old_locus_tag=AB11_4037 NZ_JHDH01000156.1 Protein Homology CDS 22428 23687 . + 0 ID=cds-WP_001395405.1;Parent=gene-AB11_RS21125;Dbxref=GenBank:WP_001395405.1;Name=WP_001395405.1;gbkey=CDS;gene=waaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418079.1;locus_tag=AB11_RS21125;product=O-antigen ligase;protein_id=WP_001395405.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 23719 24792 . - . ID=gene-AB11_RS21130;Name=waaU;gbkey=Gene;gene=waaU;gene_biotype=protein_coding;locus_tag=AB11_RS21130;old_locus_tag=AB11_4038 NZ_JHDH01000156.1 Protein Homology CDS 23719 24792 . - 0 ID=cds-WP_001236433.1;Parent=gene-AB11_RS21130;Dbxref=GenBank:WP_001236433.1;Name=WP_001236433.1;Ontology_term=GO:0016757;gbkey=CDS;gene=waaU;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418080.1;locus_tag=AB11_RS21130;product=glycosyltransferase family 9 protein;protein_id=WP_001236433.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 24825 25676 . - . ID=gene-AB11_RS21135;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=AB11_RS21135;old_locus_tag=AB11_4039 NZ_JHDH01000156.1 Protein Homology CDS 24825 25676 . - 0 ID=cds-WP_021570991.1;Parent=gene-AB11_RS21135;Dbxref=GenBank:WP_021570991.1;Name=WP_021570991.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418081.1;locus_tag=AB11_RS21135;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_021570991.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 25747 26445 . - . ID=gene-AB11_RS21140;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AB11_RS21140;old_locus_tag=AB11_4040 NZ_JHDH01000156.1 Protein Homology CDS 25747 26445 . - 0 ID=cds-WP_000615254.1;Parent=gene-AB11_RS21140;Dbxref=GenBank:WP_000615254.1;Name=WP_000615254.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418082.1;locus_tag=AB11_RS21140;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000615254.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 26463 27479 . - . ID=gene-AB11_RS21145;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=AB11_RS21145;old_locus_tag=AB11_4041 NZ_JHDH01000156.1 Protein Homology CDS 26463 27479 . - 0 ID=cds-WP_000376841.1;Parent=gene-AB11_RS21145;Dbxref=GenBank:WP_000376841.1;Name=WP_000376841.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418083.1;locus_tag=AB11_RS21145;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376841.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 27519 28538 . - . ID=gene-AB11_RS21150;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AB11_RS21150;old_locus_tag=AB11_4042 NZ_JHDH01000156.1 Protein Homology CDS 27519 28538 . - 0 ID=cds-WP_001188013.1;Parent=gene-AB11_RS21150;Dbxref=GenBank:WP_001188013.1;Name=WP_001188013.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418084.1;locus_tag=AB11_RS21150;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_001188013.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 28538 29617 . - . ID=gene-AB11_RS21155;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=AB11_RS21155;old_locus_tag=AB11_4043 NZ_JHDH01000156.1 Protein Homology CDS 28538 29617 . - 0 ID=cds-WP_000683964.1;Parent=gene-AB11_RS21155;Dbxref=GenBank:WP_000683964.1;Name=WP_000683964.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418085.2;locus_tag=AB11_RS21155;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683964.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 29661 30596 . - . ID=gene-AB11_RS21160;Name=rfaS;gbkey=Gene;gene=rfaS;gene_biotype=protein_coding;locus_tag=AB11_RS21160;old_locus_tag=AB11_4044 NZ_JHDH01000156.1 Protein Homology CDS 29661 30596 . - 0 ID=cds-WP_000158225.1;Parent=gene-AB11_RS21160;Dbxref=GenBank:WP_000158225.1;Name=WP_000158225.1;gbkey=CDS;gene=rfaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418086.1;locus_tag=AB11_RS21160;product=LPS core biosynthesis protein RfaS;protein_id=WP_000158225.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 30633 31430 . - . ID=gene-AB11_RS21165;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AB11_RS21165;old_locus_tag=AB11_4045 NZ_JHDH01000156.1 Protein Homology CDS 30633 31430 . - 0 ID=cds-WP_000229840.1;Parent=gene-AB11_RS21165;Dbxref=GenBank:WP_000229840.1;Name=WP_000229840.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418087.1;locus_tag=AB11_RS21165;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229840.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 31423 32547 . - . ID=gene-AB11_RS21170;Name=rfaG;gbkey=Gene;gene=rfaG;gene_biotype=protein_coding;locus_tag=AB11_RS21170;old_locus_tag=AB11_4046 NZ_JHDH01000156.1 Protein Homology CDS 31423 32547 . - 0 ID=cds-WP_000634283.1;Parent=gene-AB11_RS21170;Dbxref=GenBank:WP_000634283.1;Name=WP_000634283.1;gbkey=CDS;gene=rfaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418088.1;locus_tag=AB11_RS21170;product=lipopolysaccharide glucosyltransferase I;protein_id=WP_000634283.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 32544 33614 . - . ID=gene-AB11_RS21175;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AB11_RS21175;old_locus_tag=AB11_4047 NZ_JHDH01000156.1 Protein Homology CDS 32544 33614 . - 0 ID=cds-WP_001350560.1;Parent=gene-AB11_RS21175;Dbxref=GenBank:WP_001350560.1;Name=WP_001350560.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=AB11_RS21175;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001350560.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 34020 35297 . + . ID=gene-AB11_RS21180;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AB11_RS21180;old_locus_tag=AB11_4048 NZ_JHDH01000156.1 Protein Homology CDS 34020 35297 . + 0 ID=cds-WP_000891564.1;Parent=gene-AB11_RS21180;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AB11_RS21180;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 35305 35784 . + . ID=gene-AB11_RS21185;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AB11_RS21185;old_locus_tag=AB11_4049 NZ_JHDH01000156.1 Protein Homology CDS 35305 35784 . + 0 ID=cds-WP_001171866.1;Parent=gene-AB11_RS21185;Dbxref=GenBank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AB11_RS21185;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 35823 36632 . - . ID=gene-AB11_RS21190;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AB11_RS21190;old_locus_tag=AB11_4050 NZ_JHDH01000156.1 Protein Homology CDS 35823 36632 . - 0 ID=cds-WP_001114543.1;Parent=gene-AB11_RS21190;Dbxref=GenBank:WP_001114543.1;Name=WP_001114543.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418092.1;locus_tag=AB11_RS21190;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114543.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 36730 36897 . - . ID=gene-AB11_RS21195;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AB11_RS21195;old_locus_tag=AB11_4051 NZ_JHDH01000156.1 Protein Homology CDS 36730 36897 . - 0 ID=cds-WP_001051798.1;Parent=gene-AB11_RS21195;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AB11_RS21195;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 36918 37154 . - . ID=gene-AB11_RS21200;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AB11_RS21200;old_locus_tag=AB11_4052 NZ_JHDH01000156.1 Protein Homology CDS 36918 37154 . - 0 ID=cds-WP_000091955.1;Parent=gene-AB11_RS21200;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AB11_RS21200;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 37371 38039 . - . ID=gene-AB11_RS21205;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AB11_RS21205;old_locus_tag=AB11_4053 NZ_JHDH01000156.1 Protein Homology CDS 37371 38039 . - 0 ID=cds-WP_001350561.1;Parent=gene-AB11_RS21205;Dbxref=GenBank:WP_001350561.1;Name=WP_001350561.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418095.4;locus_tag=AB11_RS21205;product=RadC family protein;protein_id=WP_001350561.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 38211 39431 . + . ID=gene-AB11_RS21210;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AB11_RS21210;old_locus_tag=AB11_4054 NZ_JHDH01000156.1 Protein Homology CDS 38211 39431 . + 0 ID=cds-WP_000050139.1;Parent=gene-AB11_RS21210;Dbxref=GenBank:WP_000050139.1;Name=WP_000050139.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AB11_RS21210;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 39409 39867 . + . ID=gene-AB11_RS21215;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AB11_RS21215;old_locus_tag=AB11_4055 NZ_JHDH01000156.1 Protein Homology CDS 39409 39867 . + 0 ID=cds-WP_000976073.1;Parent=gene-AB11_RS21215;Dbxref=GenBank:WP_000976073.1;Name=WP_000976073.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AB11_RS21215;product=dUTP diphosphatase;protein_id=WP_000976073.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 39974 40570 . + . ID=gene-AB11_RS21220;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AB11_RS21220;old_locus_tag=AB11_4056 NZ_JHDH01000156.1 Protein Homology CDS 39974 40570 . + 0 ID=cds-WP_000818601.1;Parent=gene-AB11_RS21220;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AB11_RS21220;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 40607 41248 . - . ID=gene-AB11_RS21225;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AB11_RS21225;old_locus_tag=AB11_4057 NZ_JHDH01000156.1 Protein Homology CDS 40607 41248 . - 0 ID=cds-WP_000806177.1;Parent=gene-AB11_RS21225;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AB11_RS21225;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 41314 42030 . - . ID=gene-AB11_RS21230;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AB11_RS21230;old_locus_tag=AB11_4058 NZ_JHDH01000156.1 Protein Homology CDS 41314 42030 . - 0 ID=cds-WP_001247097.1;Parent=gene-AB11_RS21230;Dbxref=GenBank:WP_001247097.1;Name=WP_001247097.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AB11_RS21230;product=ribonuclease PH;protein_id=WP_001247097.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 42157 43020 . + . ID=gene-AB11_RS21235;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AB11_RS21235;old_locus_tag=AB11_4059 NZ_JHDH01000156.1 Protein Homology CDS 42157 43020 . + 0 ID=cds-WP_000621340.1;Parent=gene-AB11_RS21235;Dbxref=GenBank:WP_000621340.1;Name=WP_000621340.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AB11_RS21235;product=YicC/YloC family endoribonuclease;protein_id=WP_000621340.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 43241 44065 . + . ID=gene-AB11_RS21240;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AB11_RS21240;old_locus_tag=AB11_4060 NZ_JHDH01000156.1 Protein Homology CDS 43241 44065 . + 0 ID=cds-WP_001350563.1;Parent=gene-AB11_RS21240;Dbxref=GenBank:WP_001350563.1;Name=WP_001350563.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418102.2;locus_tag=AB11_RS21240;product=DNA damage-inducible protein D;protein_id=WP_001350563.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 44356 44973 . + . ID=gene-AB11_RS21245;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AB11_RS21245;old_locus_tag=AB11_4061 NZ_JHDH01000156.1 Protein Homology CDS 44356 44973 . + 0 ID=cds-WP_000924289.1;Parent=gene-AB11_RS21245;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AB11_RS21245;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 44970 46652 . - . ID=gene-AB11_RS21250;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AB11_RS21250;old_locus_tag=AB11_4062 NZ_JHDH01000156.1 Protein Homology CDS 44970 46652 . - 0 ID=cds-WP_032176713.1;Parent=gene-AB11_RS21250;Dbxref=GenBank:WP_032176713.1;Name=WP_032176713.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AB11_RS21250;product=NAD-dependent DNA ligase LigB;protein_id=WP_032176713.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 46910 47533 . + . ID=gene-AB11_RS21255;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AB11_RS21255;old_locus_tag=AB11_4063 NZ_JHDH01000156.1 Protein Homology CDS 46910 47533 . + 0 ID=cds-WP_001295237.1;Parent=gene-AB11_RS21255;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AB11_RS21255;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 47588 47863 . + . ID=gene-AB11_RS21260;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AB11_RS21260;old_locus_tag=AB11_4064 NZ_JHDH01000156.1 Protein Homology CDS 47588 47863 . + 0 ID=cds-WP_000135058.1;Parent=gene-AB11_RS21260;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AB11_RS21260;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 47882 49990 . + . ID=gene-AB11_RS21265;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AB11_RS21265;old_locus_tag=AB11_4065 NZ_JHDH01000156.1 Protein Homology CDS 47882 49990 . + 0 ID=cds-WP_000280488.1;Parent=gene-AB11_RS21265;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AB11_RS21265;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 49997 50686 . + . ID=gene-AB11_RS21270;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AB11_RS21270;old_locus_tag=AB11_4066 NZ_JHDH01000156.1 Protein Homology CDS 49997 50686 . + 0 ID=cds-WP_001070177.1;Parent=gene-AB11_RS21270;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AB11_RS21270;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 50692 52773 . + . ID=gene-AB11_RS21275;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AB11_RS21275;old_locus_tag=AB11_4067 NZ_JHDH01000156.1 Protein Homology CDS 50692 52773 . + 0 ID=cds-WP_000678419.1;Parent=gene-AB11_RS21275;Dbxref=GenBank:WP_000678419.1;Name=WP_000678419.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AB11_RS21275;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678419.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 52942 54147 . - . ID=gene-AB11_RS21280;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AB11_RS21280;old_locus_tag=AB11_4068 NZ_JHDH01000156.1 Protein Homology CDS 52942 54147 . - 0 ID=cds-WP_000468833.1;Parent=gene-AB11_RS21280;Dbxref=GenBank:WP_000468833.1;Name=WP_000468833.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AB11_RS21280;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 54427 55818 . + . ID=gene-AB11_RS21285;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AB11_RS21285;old_locus_tag=AB11_4069 NZ_JHDH01000156.1 Protein Homology CDS 54427 55818 . + 0 ID=cds-WP_001295238.1;Parent=gene-AB11_RS21285;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AB11_RS21285;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 55939 57648 . + . ID=gene-AB11_RS21290;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AB11_RS21290;old_locus_tag=AB11_4070 NZ_JHDH01000156.1 Protein Homology CDS 55939 57648 . + 0 ID=cds-WP_001300954.1;Parent=gene-AB11_RS21290;Dbxref=GenBank:WP_001300954.1;Name=WP_001300954.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=AB11_RS21290;product=AsmA family protein;protein_id=WP_001300954.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 57701 60019 . - . ID=gene-AB11_RS21295;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AB11_RS21295;old_locus_tag=AB11_4071 NZ_JHDH01000156.1 Protein Homology CDS 57701 60019 . - 0 ID=cds-WP_000702898.1;Parent=gene-AB11_RS21295;Dbxref=GenBank:WP_000702898.1;Name=WP_000702898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AB11_RS21295;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 60029 61411 . - . ID=gene-AB11_RS21300;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AB11_RS21300;old_locus_tag=AB11_4072 NZ_JHDH01000156.1 Protein Homology CDS 60029 61411 . - 0 ID=cds-WP_000834439.1;Parent=gene-AB11_RS21300;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AB11_RS21300;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JHDH01000156.1 RefSeq gene 61704 61798 . + . ID=gene-AB11_RS21305;Name=AB11_RS21305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS21305;old_locus_tag=AB11_4073 NZ_JHDH01000156.1 tRNAscan-SE tRNA 61704 61798 . + . ID=rna-AB11_RS21305;Parent=gene-AB11_RS21305;anticodon=(pos:61738..61740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21305;product=tRNA-Sec NZ_JHDH01000156.1 tRNAscan-SE exon 61704 61798 . + . ID=exon-AB11_RS21305-1;Parent=rna-AB11_RS21305;anticodon=(pos:61738..61740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21305;product=tRNA-Sec NZ_JHDH01000156.1 RefSeq gene 62098 63282 . + . ID=gene-AB11_RS21310;Name=AB11_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21310;old_locus_tag=AB11_4074 NZ_JHDH01000156.1 Protein Homology CDS 62098 63282 . + 0 ID=cds-WP_032223997.1;Parent=gene-AB11_RS21310;Dbxref=GenBank:WP_032223997.1;Name=WP_032223997.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218899.1;locus_tag=AB11_RS21310;product=tyrosine-type recombinase/integrase;protein_id=WP_032223997.1;transl_table=11 NZ_JHDH01000156.1 RefSeq pseudogene 63401 63712 . - . ID=gene-AB11_RS21315;Name=AB11_RS21315;end_range=63712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS21315;old_locus_tag=AB11_4075;partial=true;pseudo=true NZ_JHDH01000156.1 Protein Homology CDS 63401 63712 . - 0 ID=cds-AB11_RS21315;Parent=gene-AB11_RS21315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=63712,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB11_RS21315;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000157.1 1 12532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000157.1 RefSeq region 1 12532 . + . ID=NZ_JHDH01000157.1:1..12532;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000157.1 RefSeq pseudogene 1 397 . + . ID=gene-AB11_RS21320;Name=tnpA;end_range=397,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AB11_RS21320;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000157.1 Protein Homology CDS 1 397 . + 1 ID=cds-AB11_RS21320;Parent=gene-AB11_RS21320;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=397,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278583.1;locus_tag=AB11_RS21320;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 496 1164 . - . ID=gene-AB11_RS21325;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AB11_RS21325;old_locus_tag=AB11_4078 NZ_JHDH01000157.1 Protein Homology CDS 496 1164 . - 0 ID=cds-WP_001261013.1;Parent=gene-AB11_RS21325;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AB11_RS21325;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 1466 2059 . - . ID=gene-AB11_RS21330;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AB11_RS21330;old_locus_tag=AB11_4080 NZ_JHDH01000157.1 Protein Homology CDS 1466 2059 . - 0 ID=cds-WP_000586732.1;Parent=gene-AB11_RS21330;Dbxref=GenBank:WP_000586732.1;Name=WP_000586732.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AB11_RS21330;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586732.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 2056 3048 . - . ID=gene-AB11_RS21335;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AB11_RS21335;old_locus_tag=AB11_4081 NZ_JHDH01000157.1 Protein Homology CDS 2056 3048 . - 0 ID=cds-WP_001301046.1;Parent=gene-AB11_RS21335;Dbxref=GenBank:WP_001301046.1;Name=WP_001301046.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415946.1;locus_tag=AB11_RS21335;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001301046.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 3172 4152 . + . ID=gene-AB11_RS21340;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AB11_RS21340;old_locus_tag=AB11_4082 NZ_JHDH01000157.1 Protein Homology CDS 3172 4152 . + 0 ID=cds-WP_021570783.1;Parent=gene-AB11_RS21340;Dbxref=GenBank:WP_021570783.1;Name=WP_021570783.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AB11_RS21340;product=YdcK family protein;protein_id=WP_021570783.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 4144 4683 . - . ID=gene-AB11_RS21345;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AB11_RS21345;old_locus_tag=AB11_4083 NZ_JHDH01000157.1 Protein Homology CDS 4144 4683 . - 0 ID=cds-WP_000140873.1;Parent=gene-AB11_RS21345;Dbxref=GenBank:WP_000140873.1;Name=WP_000140873.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AB11_RS21345;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140873.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 4746 4970 . - . ID=gene-AB11_RS21350;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AB11_RS21350;old_locus_tag=AB11_4084 NZ_JHDH01000157.1 Protein Homology CDS 4746 4970 . - 0 ID=cds-WP_001296778.1;Parent=gene-AB11_RS21350;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AB11_RS21350;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 5110 6765 . - . ID=gene-AB11_RS21355;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AB11_RS21355;old_locus_tag=AB11_4085 NZ_JHDH01000157.1 Protein Homology CDS 5110 6765 . - 0 ID=cds-WP_000375961.1;Parent=gene-AB11_RS21355;Dbxref=GenBank:WP_000375961.1;Name=WP_000375961.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415941.5;locus_tag=AB11_RS21355;product=glucan biosynthesis protein OpgD;protein_id=WP_000375961.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 6990 8333 . - . ID=gene-AB11_RS21360;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AB11_RS21360;old_locus_tag=AB11_4086 NZ_JHDH01000157.1 Protein Homology CDS 6990 8333 . - 0 ID=cds-WP_000013789.1;Parent=gene-AB11_RS21360;Dbxref=GenBank:WP_000013789.1;Name=WP_000013789.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AB11_RS21360;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013789.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 8550 9473 . + . ID=gene-AB11_RS21365;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AB11_RS21365;old_locus_tag=AB11_4087 NZ_JHDH01000157.1 Protein Homology CDS 8550 9473 . + 0 ID=cds-WP_000414567.1;Parent=gene-AB11_RS21365;Dbxref=GenBank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AB11_RS21365;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414567.1;transl_table=11 NZ_JHDH01000157.1 RefSeq gene 9511 11151 . - . ID=gene-AB11_RS21370;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AB11_RS21370;old_locus_tag=AB11_4088 NZ_JHDH01000157.1 Protein Homology CDS 9511 11151 . - 0 ID=cds-WP_032224003.1;Parent=gene-AB11_RS21370;Dbxref=GenBank:WP_032224003.1;Name=WP_032224003.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AB11_RS21370;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_032224003.1;transl_table=11 NZ_JHDH01000157.1 RefSeq pseudogene 11459 12532 . + . ID=gene-AB11_RS21375;Name=AB11_RS21375;end_range=12532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS21375;partial=true;pseudo=true NZ_JHDH01000157.1 Protein Homology CDS 11459 12532 . + 0 ID=cds-AB11_RS21375;Parent=gene-AB11_RS21375;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=12532,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB11_RS21375;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000158.1 1 110119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000158.1 RefSeq region 1 110119 . + . ID=NZ_JHDH01000158.1:1..110119;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000158.1 RefSeq gene 1 282 . + . ID=gene-AB11_RS21380;Name=AB11_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21380;old_locus_tag=AB11_4091;partial=true;start_range=.,1 NZ_JHDH01000158.1 Protein Homology CDS 1 282 . + 0 ID=cds-WP_000294627.1;Parent=gene-AB11_RS21380;Dbxref=GenBank:WP_000294627.1;Name=WP_000294627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AB11_RS21380;partial=true;product=JAB domain-containing protein;protein_id=WP_000294627.1;start_range=.,1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 345 566 . + . ID=gene-AB11_RS21385;Name=AB11_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21385;old_locus_tag=AB11_4092 NZ_JHDH01000158.1 Protein Homology CDS 345 566 . + 0 ID=cds-WP_000692300.1;Parent=gene-AB11_RS21385;Dbxref=GenBank:WP_000692300.1;Name=WP_000692300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AB11_RS21385;product=DUF987 domain-containing protein;protein_id=WP_000692300.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 729 1106 . + . ID=gene-AB11_RS21390;Name=AB11_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21390;old_locus_tag=AB11_4094 NZ_JHDH01000158.1 Protein Homology CDS 729 1106 . + 0 ID=cds-WP_001390338.1;Parent=gene-AB11_RS21390;Dbxref=GenBank:WP_001390338.1;Name=WP_001390338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708772.1;locus_tag=AB11_RS21390;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001390338.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 1153 1530 . + . ID=gene-AB11_RS21395;Name=AB11_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21395;old_locus_tag=AB11_4095 NZ_JHDH01000158.1 Protein Homology CDS 1153 1530 . + 0 ID=cds-WP_001094437.1;Parent=gene-AB11_RS21395;Dbxref=GenBank:WP_001094437.1;Name=WP_001094437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708773.1;locus_tag=AB11_RS21395;product=TA system toxin CbtA family protein;protein_id=WP_001094437.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 1527 2015 . + . ID=gene-AB11_RS21400;Name=AB11_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21400;old_locus_tag=AB11_4096 NZ_JHDH01000158.1 Protein Homology CDS 1527 2015 . + 0 ID=cds-WP_000761716.1;Parent=gene-AB11_RS21400;Dbxref=GenBank:WP_000761716.1;Name=WP_000761716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708774.1;locus_tag=AB11_RS21400;product=DUF5983 family protein;protein_id=WP_000761716.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 2035 2232 . + . ID=gene-AB11_RS21405;Name=AB11_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21405;old_locus_tag=AB11_4097 NZ_JHDH01000158.1 Protein Homology CDS 2035 2232 . + 0 ID=cds-WP_000772032.1;Parent=gene-AB11_RS21405;Dbxref=GenBank:WP_000772032.1;Name=WP_000772032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708775.1;locus_tag=AB11_RS21405;product=DUF957 domain-containing protein;protein_id=WP_000772032.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 2317 3162 . + . ID=gene-AB11_RS21410;Name=AB11_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21410;old_locus_tag=AB11_4098 NZ_JHDH01000158.1 Protein Homology CDS 2317 3162 . + 0 ID=cds-WP_001274561.1;Parent=gene-AB11_RS21410;Dbxref=GenBank:WP_001274561.1;Name=WP_001274561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280511.1;locus_tag=AB11_RS21410;product=DUF4942 domain-containing protein;protein_id=WP_001274561.1;transl_table=11 NZ_JHDH01000158.1 RefSeq pseudogene 3397 3558 . + . ID=gene-AB11_RS25625;Name=rhuM;end_range=3558,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AB11_RS25625;old_locus_tag=AB11_4099;partial=true;pseudo=true;start_range=.,3397 NZ_JHDH01000158.1 Protein Homology CDS 3397 3558 . + 0 ID=cds-AB11_RS25625;Parent=gene-AB11_RS25625;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3558,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=AB11_RS25625;partial=true;product=RhuM family protein;pseudo=true;start_range=.,3397;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 3955 5139 . + . ID=gene-AB11_RS21420;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AB11_RS21420;old_locus_tag=AB11_4100 NZ_JHDH01000158.1 Protein Homology CDS 3955 5139 . + 0 ID=cds-WP_001172876.1;Parent=gene-AB11_RS21420;Dbxref=GenBank:WP_001172876.1;Name=WP_001172876.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AB11_RS21420;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 5250 6173 . + . ID=gene-AB11_RS21425;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AB11_RS21425;old_locus_tag=AB11_4101 NZ_JHDH01000158.1 Protein Homology CDS 5250 6173 . + 0 ID=cds-WP_000535961.1;Parent=gene-AB11_RS21425;Dbxref=GenBank:WP_000535961.1;Name=WP_000535961.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AB11_RS21425;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535961.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 6177 6995 . - . ID=gene-AB11_RS21430;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AB11_RS21430;old_locus_tag=AB11_4102 NZ_JHDH01000158.1 Protein Homology CDS 6177 6995 . - 0 ID=cds-WP_000779426.1;Parent=gene-AB11_RS21430;Dbxref=GenBank:WP_000779426.1;Name=WP_000779426.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AB11_RS21430;product=lipoprotein NlpA;protein_id=WP_000779426.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 7217 7510 . + . ID=gene-AB11_RS21435;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AB11_RS21435;old_locus_tag=AB11_4103 NZ_JHDH01000158.1 Protein Homology CDS 7217 7510 . + 0 ID=cds-WP_000805509.1;Parent=gene-AB11_RS21435;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AB11_RS21435;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 7551 8741 . - . ID=gene-AB11_RS21440;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AB11_RS21440;old_locus_tag=AB11_4104 NZ_JHDH01000158.1 Protein Homology CDS 7551 8741 . - 0 ID=cds-WP_001288549.1;Parent=gene-AB11_RS21440;Dbxref=GenBank:WP_001288549.1;Name=WP_001288549.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AB11_RS21440;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 8952 9404 . - . ID=gene-AB11_RS21445;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AB11_RS21445;old_locus_tag=AB11_4105 NZ_JHDH01000158.1 Protein Homology CDS 8952 9404 . - 0 ID=cds-WP_001295241.1;Parent=gene-AB11_RS21445;Dbxref=GenBank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AB11_RS21445;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 9457 10791 . - . ID=gene-AB11_RS21450;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AB11_RS21450;old_locus_tag=AB11_4106 NZ_JHDH01000158.1 Protein Homology CDS 9457 10791 . - 0 ID=cds-WP_001403836.1;Parent=gene-AB11_RS21450;Dbxref=GenBank:WP_001403836.1;Name=WP_001403836.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AB11_RS21450;product=adenine permease AdeQ;protein_id=WP_001403836.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 10966 12732 . + . ID=gene-AB11_RS21455;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AB11_RS21455;old_locus_tag=AB11_4107 NZ_JHDH01000158.1 Protein Homology CDS 10966 12732 . + 0 ID=cds-WP_001065718.1;Parent=gene-AB11_RS21455;Dbxref=GenBank:WP_001065718.1;Name=WP_001065718.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AB11_RS21455;product=adenine deaminase;protein_id=WP_001065718.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 12777 14168 . - . ID=gene-AB11_RS21460;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AB11_RS21460;old_locus_tag=AB11_4108 NZ_JHDH01000158.1 Protein Homology CDS 12777 14168 . - 0 ID=cds-WP_001665827.1;Parent=gene-AB11_RS21460;Dbxref=GenBank:WP_001665827.1;Name=WP_001665827.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AB11_RS21460;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_001665827.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 14306 15625 . - . ID=gene-AB11_RS21465;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AB11_RS21465;old_locus_tag=AB11_4109 NZ_JHDH01000158.1 Protein Homology CDS 14306 15625 . - 0 ID=cds-WP_000936566.1;Parent=gene-AB11_RS21465;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AB11_RS21465;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 15635 17137 . - . ID=gene-AB11_RS21470;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AB11_RS21470;old_locus_tag=AB11_4110 NZ_JHDH01000158.1 Protein Homology CDS 15635 17137 . - 0 ID=cds-WP_021570995.1;Parent=gene-AB11_RS21470;Dbxref=GenBank:WP_021570995.1;Name=WP_021570995.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AB11_RS21470;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_021570995.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 17137 17727 . - . ID=gene-AB11_RS21475;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AB11_RS21475;old_locus_tag=AB11_4111 NZ_JHDH01000158.1 Protein Homology CDS 17137 17727 . - 0 ID=cds-WP_000633668.1;Parent=gene-AB11_RS21475;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AB11_RS21475;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 17802 18092 . - . ID=gene-AB11_RS21480;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB11_RS21480;old_locus_tag=AB11_4112 NZ_JHDH01000158.1 Protein Homology CDS 17802 18092 . - 0 ID=cds-WP_001181706.1;Parent=gene-AB11_RS21480;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AB11_RS21480;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 18096 19784 . - . ID=gene-AB11_RS21485;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AB11_RS21485;old_locus_tag=AB11_4113 NZ_JHDH01000158.1 Protein Homology CDS 18096 19784 . - 0 ID=cds-WP_032224011.1;Parent=gene-AB11_RS21485;Dbxref=GenBank:WP_032224011.1;Name=WP_032224011.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AB11_RS21485;product=acetolactate synthase large subunit;protein_id=WP_032224011.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 19890 19988 . - . ID=gene-AB11_RS21490;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AB11_RS21490 NZ_JHDH01000158.1 Protein Homology CDS 19890 19988 . - 0 ID=cds-WP_001312198.1;Parent=gene-AB11_RS21490;Dbxref=GenBank:WP_001312198.1;Name=WP_001312198.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AB11_RS21490;product=ilvB operon leader peptide IvbL;protein_id=WP_001312198.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 20552 20641 . + . ID=gene-AB11_RS21495;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AB11_RS21495 NZ_JHDH01000158.1 Protein Homology CDS 20552 20641 . + 0 ID=cds-WP_000060506.1;Parent=gene-AB11_RS21495;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AB11_RS21495;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 20765 20839 . - . ID=gene-AB11_RS25390;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AB11_RS25390 NZ_JHDH01000158.1 Protein Homology CDS 20765 20839 . - 0 ID=cds-WP_211180519.1;Parent=gene-AB11_RS25390;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AB11_RS25390;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 20921 22105 . + . ID=gene-AB11_RS21500;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AB11_RS21500;old_locus_tag=AB11_4115 NZ_JHDH01000158.1 Protein Homology CDS 20921 22105 . + 0 ID=cds-WP_000828746.1;Parent=gene-AB11_RS21500;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AB11_RS21500;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 22113 22610 . - . ID=gene-AB11_RS21505;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AB11_RS21505;old_locus_tag=AB11_4116 NZ_JHDH01000158.1 Protein Homology CDS 22113 22610 . - 0 ID=cds-WP_000148061.1;Parent=gene-AB11_RS21505;Dbxref=GenBank:WP_000148061.1;Name=WP_000148061.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418130.1;locus_tag=AB11_RS21505;product=radical SAM protein;protein_id=WP_000148061.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 22607 22969 . - . ID=gene-AB11_RS21510;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AB11_RS21510;old_locus_tag=AB11_4117 NZ_JHDH01000158.1 Protein Homology CDS 22607 22969 . - 0 ID=cds-WP_001113432.1;Parent=gene-AB11_RS21510;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AB11_RS21510;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 22959 23306 . - . ID=gene-AB11_RS21515;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AB11_RS21515;old_locus_tag=AB11_4118 NZ_JHDH01000158.1 Protein Homology CDS 22959 23306 . - 0 ID=cds-WP_000703959.1;Parent=gene-AB11_RS21515;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AB11_RS21515;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 23414 23863 . + . ID=gene-AB11_RS21520;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AB11_RS21520;old_locus_tag=AB11_4119 NZ_JHDH01000158.1 Protein Homology CDS 23414 23863 . + 0 ID=cds-WP_000511289.1;Parent=gene-AB11_RS21520;Dbxref=GenBank:WP_000511289.1;Name=WP_000511289.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AB11_RS21520;product=protein YidI;protein_id=WP_000511289.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 23910 25403 . - . ID=gene-AB11_RS21525;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AB11_RS21525;old_locus_tag=AB11_4120 NZ_JHDH01000158.1 Protein Homology CDS 23910 25403 . - 0 ID=cds-WP_000828527.1;Parent=gene-AB11_RS21525;Dbxref=GenBank:WP_000828527.1;Name=WP_000828527.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AB11_RS21525;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828527.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 25400 27115 . - . ID=gene-AB11_RS21530;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AB11_RS21530;old_locus_tag=AB11_4121 NZ_JHDH01000158.1 Protein Homology CDS 25400 27115 . - 0 ID=cds-WP_032224014.1;Parent=gene-AB11_RS21530;Dbxref=GenBank:WP_032224014.1;Name=WP_032224014.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AB11_RS21530;product=solute:sodium symporter family transporter;protein_id=WP_032224014.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 27282 28175 . + . ID=gene-AB11_RS21535;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AB11_RS21535;old_locus_tag=AB11_4122 NZ_JHDH01000158.1 Protein Homology CDS 27282 28175 . + 0 ID=cds-WP_001013540.1;Parent=gene-AB11_RS21535;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AB11_RS21535;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JHDH01000158.1 RefSeq pseudogene 28172 28986 . - . ID=gene-AB11_RS21540;Name=AB11_RS21540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS21540;old_locus_tag=AB11_4124;pseudo=true NZ_JHDH01000158.1 Protein Homology CDS 28172 28986 . - 0 ID=cds-AB11_RS21540;Parent=gene-AB11_RS21540;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AB11_RS21540;product=family 4 glycosyl hydrolase;pseudo=true;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 28986 30602 . - . ID=gene-AB11_RS21545;Name=AB11_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21545;old_locus_tag=AB11_4125 NZ_JHDH01000158.1 Protein Homology CDS 28986 30602 . - 0 ID=cds-WP_000952127.1;Parent=gene-AB11_RS21545;Dbxref=GenBank:WP_000952127.1;Name=WP_000952127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AB11_RS21545;product=PTS sugar transporter subunit IIB;protein_id=WP_000952127.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 30898 31614 . + . ID=gene-AB11_RS21550;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AB11_RS21550;old_locus_tag=AB11_4126 NZ_JHDH01000158.1 Protein Homology CDS 30898 31614 . + 0 ID=cds-WP_001300779.1;Parent=gene-AB11_RS21550;Dbxref=GenBank:WP_001300779.1;Name=WP_001300779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AB11_RS21550;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 31611 33272 . - . ID=gene-AB11_RS21555;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AB11_RS21555;old_locus_tag=AB11_4127 NZ_JHDH01000158.1 Protein Homology CDS 31611 33272 . - 0 ID=cds-WP_001279752.1;Parent=gene-AB11_RS21555;Dbxref=GenBank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AB11_RS21555;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 33468 33896 . - . ID=gene-AB11_RS21560;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AB11_RS21560;old_locus_tag=AB11_4128 NZ_JHDH01000158.1 Protein Homology CDS 33468 33896 . - 0 ID=cds-WP_001243431.1;Parent=gene-AB11_RS21560;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AB11_RS21560;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 34008 34421 . - . ID=gene-AB11_RS21565;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AB11_RS21565;old_locus_tag=AB11_4129 NZ_JHDH01000158.1 Protein Homology CDS 34008 34421 . - 0 ID=cds-WP_001243437.1;Parent=gene-AB11_RS21565;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AB11_RS21565;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JHDH01000158.1 cmsearch sequence_feature 34415 34487 . - . ID=id-NZ_JHDH01000158.1:34415..34487;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000158.1 RefSeq gene 34727 35059 . + . ID=gene-AB11_RS21570;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AB11_RS21570 NZ_JHDH01000158.1 Protein Homology CDS 34727 35059 . + 0 ID=cds-WP_000620888.1;Parent=gene-AB11_RS21570;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AB11_RS21570;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 35061 36275 . - . ID=gene-AB11_RS21575;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AB11_RS21575;old_locus_tag=AB11_4132 NZ_JHDH01000158.1 Protein Homology CDS 35061 36275 . - 0 ID=cds-WP_032224017.1;Parent=gene-AB11_RS21575;Dbxref=GenBank:WP_032224017.1;Name=WP_032224017.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AB11_RS21575;product=DUF3748 domain-containing protein;protein_id=WP_032224017.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 36376 37440 . + . ID=gene-AB11_RS21580;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AB11_RS21580;old_locus_tag=AB11_4133 NZ_JHDH01000158.1 Protein Homology CDS 36376 37440 . + 0 ID=cds-WP_001340434.1;Parent=gene-AB11_RS21580;Dbxref=GenBank:WP_001340434.1;Name=WP_001340434.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AB11_RS21580;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001340434.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 37437 38774 . - . ID=gene-AB11_RS21585;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AB11_RS21585;old_locus_tag=AB11_4134 NZ_JHDH01000158.1 Protein Homology CDS 37437 38774 . - 0 ID=cds-WP_000253455.1;Parent=gene-AB11_RS21585;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AB11_RS21585;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 38849 39997 . - . ID=gene-AB11_RS21590;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AB11_RS21590;old_locus_tag=AB11_4135 NZ_JHDH01000158.1 Protein Homology CDS 38849 39997 . - 0 ID=cds-WP_000705001.1;Parent=gene-AB11_RS21590;Dbxref=GenBank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AB11_RS21590;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 39994 40611 . - . ID=gene-AB11_RS21595;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AB11_RS21595;old_locus_tag=AB11_4136 NZ_JHDH01000158.1 Protein Homology CDS 39994 40611 . - 0 ID=cds-WP_001198722.1;Parent=gene-AB11_RS21595;Dbxref=GenBank:WP_001198722.1;Name=WP_001198722.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AB11_RS21595;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198722.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 40595 41473 . - . ID=gene-AB11_RS21600;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AB11_RS21600;old_locus_tag=AB11_4137 NZ_JHDH01000158.1 Protein Homology CDS 40595 41473 . - 0 ID=cds-WP_000127091.1;Parent=gene-AB11_RS21600;Dbxref=GenBank:WP_000127091.1;Name=WP_000127091.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418148.1;locus_tag=AB11_RS21600;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127091.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 41470 42159 . - . ID=gene-AB11_RS21605;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AB11_RS21605;old_locus_tag=AB11_4138 NZ_JHDH01000158.1 Protein Homology CDS 41470 42159 . - 0 ID=cds-WP_000174305.1;Parent=gene-AB11_RS21605;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AB11_RS21605;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 42437 43093 . + . ID=gene-AB11_RS21610;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AB11_RS21610;old_locus_tag=AB11_4139 NZ_JHDH01000158.1 Protein Homology CDS 42437 43093 . + 0 ID=cds-WP_000772934.1;Parent=gene-AB11_RS21610;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yidX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AB11_RS21610;product=YidX family protein;protein_id=WP_000772934.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 43139 43951 . - . ID=gene-AB11_RS21615;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AB11_RS21615;old_locus_tag=AB11_4140 NZ_JHDH01000158.1 Protein Homology CDS 43139 43951 . - 0 ID=cds-WP_000985549.1;Parent=gene-AB11_RS21615;Dbxref=GenBank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AB11_RS21615;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 44066 44464 . - . ID=gene-AB11_RS21620;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AB11_RS21620;old_locus_tag=AB11_4141 NZ_JHDH01000158.1 Protein Homology CDS 44066 44464 . - 0 ID=cds-WP_000522208.1;Parent=gene-AB11_RS21620;Dbxref=GenBank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AB11_RS21620;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 44704 47118 . - . ID=gene-AB11_RS21625;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AB11_RS21625;old_locus_tag=AB11_4142 NZ_JHDH01000158.1 Protein Homology CDS 44704 47118 . - 0 ID=cds-WP_000072067.1;Parent=gene-AB11_RS21625;Dbxref=GenBank:WP_000072067.1;Name=WP_000072067.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AB11_RS21625;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072067.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 47147 48220 . - . ID=gene-AB11_RS21630;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AB11_RS21630;old_locus_tag=AB11_4143 NZ_JHDH01000158.1 Protein Homology CDS 47147 48220 . - 0 ID=cds-WP_000060112.1;Parent=gene-AB11_RS21630;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AB11_RS21630;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 48220 49320 . - . ID=gene-AB11_RS21635;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AB11_RS21635;old_locus_tag=AB11_4144 NZ_JHDH01000158.1 Protein Homology CDS 48220 49320 . - 0 ID=cds-WP_000673464.1;Parent=gene-AB11_RS21635;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AB11_RS21635;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 49325 50728 . - . ID=gene-AB11_RS21640;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AB11_RS21640;old_locus_tag=AB11_4145 NZ_JHDH01000158.1 Protein Homology CDS 49325 50728 . - 0 ID=cds-WP_000059111.1;Parent=gene-AB11_RS21640;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AB11_RS21640;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 51025 51105 . + . ID=gene-AB11_RS21645;Name=AB11_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS21645 NZ_JHDH01000158.1 Protein Homology CDS 51025 51105 . + 0 ID=cds-WP_120795392.1;Parent=gene-AB11_RS21645;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AB11_RS21645;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 51335 51475 . + . ID=gene-AB11_RS21650;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AB11_RS21650;old_locus_tag=AB11_4146 NZ_JHDH01000158.1 Protein Homology CDS 51335 51475 . + 0 ID=cds-WP_000831330.1;Parent=gene-AB11_RS21650;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AB11_RS21650;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 51492 51851 . + . ID=gene-AB11_RS21655;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AB11_RS21655;old_locus_tag=AB11_4147 NZ_JHDH01000158.1 Protein Homology CDS 51492 51851 . + 0 ID=cds-WP_000239730.1;Parent=gene-AB11_RS21655;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AB11_RS21655;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 51815 52072 . + . ID=gene-AB11_RS21660;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AB11_RS21660 NZ_JHDH01000158.1 Protein Homology CDS 51815 52072 . + 0 ID=cds-WP_001307474.1;Parent=gene-AB11_RS21660;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AB11_RS21660;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 52075 53721 . + . ID=gene-AB11_RS21665;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AB11_RS21665;old_locus_tag=AB11_4148 NZ_JHDH01000158.1 Protein Homology CDS 52075 53721 . + 0 ID=cds-WP_000378250.1;Parent=gene-AB11_RS21665;Dbxref=GenBank:WP_000378250.1;Name=WP_000378250.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AB11_RS21665;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 53827 55191 . + . ID=gene-AB11_RS21670;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AB11_RS21670;old_locus_tag=AB11_4149 NZ_JHDH01000158.1 Protein Homology CDS 53827 55191 . + 0 ID=cds-WP_001282346.1;Parent=gene-AB11_RS21670;Dbxref=GenBank:WP_001282346.1;Name=WP_001282346.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AB11_RS21670;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 55434 55508 . + . ID=gene-AB11_RS21675;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AB11_RS21675 NZ_JHDH01000158.1 Protein Homology CDS 55434 55508 . + 0 ID=cds-WP_001364348.1;Parent=gene-AB11_RS21675;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AB11_RS21675;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 55729 57144 . + . ID=gene-AB11_RS21680;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AB11_RS21680;old_locus_tag=AB11_4150 NZ_JHDH01000158.1 Protein Homology CDS 55729 57144 . + 0 ID=cds-WP_001295247.1;Parent=gene-AB11_RS21680;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AB11_RS21680;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 57235 58482 . + . ID=gene-AB11_RS21685;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AB11_RS21685;old_locus_tag=AB11_4151 NZ_JHDH01000158.1 Protein Homology CDS 57235 58482 . + 0 ID=cds-WP_000131911.1;Parent=gene-AB11_RS21685;Dbxref=GenBank:WP_000131911.1;Name=WP_000131911.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AB11_RS21685;product=low affinity tryptophan permease TnaB;protein_id=WP_000131911.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 58614 59789 . + . ID=gene-AB11_RS21690;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AB11_RS21690;old_locus_tag=AB11_4152 NZ_JHDH01000158.1 Protein Homology CDS 58614 59789 . + 0 ID=cds-WP_000085982.1;Parent=gene-AB11_RS21690;Dbxref=GenBank:WP_000085982.1;Name=WP_000085982.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AB11_RS21690;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 59764 60723 . + . ID=gene-AB11_RS21695;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AB11_RS21695;old_locus_tag=AB11_4153 NZ_JHDH01000158.1 Protein Homology CDS 59764 60723 . + 0 ID=cds-WP_000748502.1;Parent=gene-AB11_RS21695;Dbxref=GenBank:WP_000748502.1;Name=WP_000748502.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AB11_RS21695;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000748502.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 60880 61629 . + . ID=gene-AB11_RS21700;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB11_RS21700;old_locus_tag=AB11_4154 NZ_JHDH01000158.1 Protein Homology CDS 60880 61629 . + 0 ID=cds-WP_032224020.1;Parent=gene-AB11_RS21700;Dbxref=GenBank:WP_032224020.1;Name=WP_032224020.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AB11_RS21700;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_032224020.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 61651 62217 . + . ID=gene-AB11_RS21705;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AB11_RS21705;old_locus_tag=AB11_4155 NZ_JHDH01000158.1 Protein Homology CDS 61651 62217 . + 0 ID=cds-WP_001291261.1;Parent=gene-AB11_RS21705;Dbxref=GenBank:WP_001291261.1;Name=WP_001291261.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AB11_RS21705;product=class I chromate reductase YieF;protein_id=WP_001291261.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 62271 63608 . - . ID=gene-AB11_RS21710;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AB11_RS21710;old_locus_tag=AB11_4156 NZ_JHDH01000158.1 Protein Homology CDS 62271 63608 . - 0 ID=cds-WP_001299598.1;Parent=gene-AB11_RS21710;Dbxref=GenBank:WP_001299598.1;Name=WP_001299598.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AB11_RS21710;product=adenine permease AdeP;protein_id=WP_001299598.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 63775 64440 . + . ID=gene-AB11_RS21715;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AB11_RS21715;old_locus_tag=AB11_4157 NZ_JHDH01000158.1 Protein Homology CDS 63775 64440 . + 0 ID=cds-WP_000078043.1;Parent=gene-AB11_RS21715;Dbxref=GenBank:WP_000078043.1;Name=WP_000078043.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AB11_RS21715;product=6-phosphogluconate phosphatase;protein_id=WP_000078043.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 64507 64974 . + . ID=gene-AB11_RS21720;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;locus_tag=AB11_RS21720;old_locus_tag=AB11_4158 NZ_JHDH01000158.1 Protein Homology CDS 64507 64974 . + 0 ID=cds-WP_000116777.1;Parent=gene-AB11_RS21720;Dbxref=GenBank:WP_000116777.1;Name=WP_000116777.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418172.1;locus_tag=AB11_RS21720;product=protein CbrB;protein_id=WP_000116777.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 65023 65610 . + . ID=gene-AB11_RS21725;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;locus_tag=AB11_RS21725;old_locus_tag=AB11_4159 NZ_JHDH01000158.1 Protein Homology CDS 65023 65610 . + 0 ID=cds-WP_000193072.1;Parent=gene-AB11_RS21725;Dbxref=GenBank:WP_000193072.1;Name=WP_000193072.1;Ontology_term=GO:0030153;gbkey=CDS;gene=cbrC;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=AB11_RS21725;product=PF03691 family colicin E2 tolerance protein CbrC;protein_id=WP_000193072.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 65672 66394 . - . ID=gene-AB11_RS21730;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=AB11_RS21730;old_locus_tag=AB11_4160 NZ_JHDH01000158.1 Protein Homology CDS 65672 66394 . - 0 ID=cds-WP_000766900.1;Parent=gene-AB11_RS21730;Dbxref=GenBank:WP_000766900.1;Name=WP_000766900.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026242.1;locus_tag=AB11_RS21730;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766900.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 66409 67578 . - . ID=gene-AB11_RS21735;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=AB11_RS21735;old_locus_tag=AB11_4161 NZ_JHDH01000158.1 Protein Homology CDS 66409 67578 . - 0 ID=cds-WP_001556329.1;Parent=gene-AB11_RS21735;Dbxref=GenBank:WP_001556329.1;Name=WP_001556329.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AB11_RS21735;product=esterase;protein_id=WP_001556329.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 67605 69221 . - . ID=gene-AB11_RS21740;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=AB11_RS21740;old_locus_tag=AB11_4162 NZ_JHDH01000158.1 Protein Homology CDS 67605 69221 . - 0 ID=cds-WP_032224023.1;Parent=gene-AB11_RS21740;Dbxref=GenBank:WP_032224023.1;Name=WP_032224023.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AB11_RS21740;product=carbohydrate-specific porin BglH;protein_id=WP_032224023.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 69290 70702 . - . ID=gene-AB11_RS21745;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AB11_RS21745;old_locus_tag=AB11_4163 NZ_JHDH01000158.1 Protein Homology CDS 69290 70702 . - 0 ID=cds-WP_000643228.1;Parent=gene-AB11_RS21745;Dbxref=GenBank:WP_000643228.1;Name=WP_000643228.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418177.1;locus_tag=AB11_RS21745;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643228.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 70721 72598 . - . ID=gene-AB11_RS21750;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AB11_RS21750;old_locus_tag=AB11_4164 NZ_JHDH01000158.1 Protein Homology CDS 70721 72598 . - 0 ID=cds-WP_000137296.1;Parent=gene-AB11_RS21750;Dbxref=GenBank:WP_000137296.1;Name=WP_000137296.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AB11_RS21750;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_000137296.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 72732 73568 . - . ID=gene-AB11_RS21755;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AB11_RS21755;old_locus_tag=AB11_4165 NZ_JHDH01000158.1 Protein Homology CDS 72732 73568 . - 0 ID=cds-WP_001295251.1;Parent=gene-AB11_RS21755;Dbxref=GenBank:WP_001295251.1;Name=WP_001295251.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AB11_RS21755;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 73854 74579 . - . ID=gene-AB11_RS21760;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AB11_RS21760;old_locus_tag=AB11_4167 NZ_JHDH01000158.1 Protein Homology CDS 73854 74579 . - 0 ID=cds-WP_000377786.1;Parent=gene-AB11_RS21760;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AB11_RS21760;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 74594 75367 . - . ID=gene-AB11_RS21765;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AB11_RS21765;old_locus_tag=AB11_4168 NZ_JHDH01000158.1 Protein Homology CDS 74594 75367 . - 0 ID=cds-WP_000063125.1;Parent=gene-AB11_RS21765;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AB11_RS21765;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 75550 76440 . - . ID=gene-AB11_RS21770;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AB11_RS21770;old_locus_tag=AB11_4169 NZ_JHDH01000158.1 Protein Homology CDS 75550 76440 . - 0 ID=cds-WP_001251998.1;Parent=gene-AB11_RS21770;Dbxref=GenBank:WP_001251998.1;Name=WP_001251998.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418182.1;locus_tag=AB11_RS21770;product=phosphate ABC transporter permease PstA;protein_id=WP_001251998.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 76440 77399 . - . ID=gene-AB11_RS21775;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AB11_RS21775;old_locus_tag=AB11_4170 NZ_JHDH01000158.1 Protein Homology CDS 76440 77399 . - 0 ID=cds-WP_000741620.1;Parent=gene-AB11_RS21775;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AB11_RS21775;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 77486 78526 . - . ID=gene-AB11_RS21780;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AB11_RS21780;old_locus_tag=AB11_4171 NZ_JHDH01000158.1 Protein Homology CDS 77486 78526 . - 0 ID=cds-WP_000867146.1;Parent=gene-AB11_RS21780;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AB11_RS21780;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 78840 80669 . - . ID=gene-AB11_RS21785;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AB11_RS21785;old_locus_tag=AB11_4172 NZ_JHDH01000158.1 Protein Homology CDS 78840 80669 . - 0 ID=cds-WP_000334099.1;Parent=gene-AB11_RS21785;Dbxref=GenBank:WP_000334099.1;Name=WP_000334099.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AB11_RS21785;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334099.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 80831 82201 . - . ID=gene-AB11_RS21790;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AB11_RS21790;old_locus_tag=AB11_4173 NZ_JHDH01000158.1 Protein Homology CDS 80831 82201 . - 0 ID=cds-WP_000933736.1;Parent=gene-AB11_RS21790;Dbxref=GenBank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AB11_RS21790;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 82554 82973 . - . ID=gene-AB11_RS21795;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AB11_RS21795;old_locus_tag=AB11_4174 NZ_JHDH01000158.1 Protein Homology CDS 82554 82973 . - 0 ID=cds-WP_001251965.1;Parent=gene-AB11_RS21795;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AB11_RS21795;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 82994 84376 . - . ID=gene-AB11_RS21800;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AB11_RS21800;old_locus_tag=AB11_4175 NZ_JHDH01000158.1 Protein Homology CDS 82994 84376 . - 0 ID=cds-WP_000190503.1;Parent=gene-AB11_RS21800;Dbxref=GenBank:WP_000190503.1;Name=WP_000190503.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AB11_RS21800;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190503.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 84403 85266 . - . ID=gene-AB11_RS21805;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AB11_RS21805;old_locus_tag=AB11_4176 NZ_JHDH01000158.1 Protein Homology CDS 84403 85266 . - 0 ID=cds-WP_000896498.1;Parent=gene-AB11_RS21805;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AB11_RS21805;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 85317 86858 . - . ID=gene-AB11_RS21810;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AB11_RS21810;old_locus_tag=AB11_4177 NZ_JHDH01000158.1 Protein Homology CDS 85317 86858 . - 0 ID=cds-WP_001176745.1;Parent=gene-AB11_RS21810;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AB11_RS21810;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 86871 87404 . - . ID=gene-AB11_RS21815;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AB11_RS21815;old_locus_tag=AB11_4178 NZ_JHDH01000158.1 Protein Homology CDS 86871 87404 . - 0 ID=cds-WP_001288587.1;Parent=gene-AB11_RS21815;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AB11_RS21815;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 87419 87889 . - . ID=gene-AB11_RS21820;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AB11_RS21820;old_locus_tag=AB11_4179 NZ_JHDH01000158.1 Protein Homology CDS 87419 87889 . - 0 ID=cds-WP_001052219.1;Parent=gene-AB11_RS21820;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AB11_RS21820;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 87951 88190 . - . ID=gene-AB11_RS21825;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AB11_RS21825;old_locus_tag=AB11_4180 NZ_JHDH01000158.1 Protein Homology CDS 87951 88190 . - 0 ID=cds-WP_000429386.1;Parent=gene-AB11_RS21825;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AB11_RS21825;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 88237 89052 . - . ID=gene-AB11_RS21830;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AB11_RS21830;old_locus_tag=AB11_4181 NZ_JHDH01000158.1 Protein Homology CDS 88237 89052 . - 0 ID=cds-WP_000135625.1;Parent=gene-AB11_RS21830;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AB11_RS21830;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 89061 89441 . - . ID=gene-AB11_RS21835;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AB11_RS21835 NZ_JHDH01000158.1 Protein Homology CDS 89061 89441 . - 0 ID=cds-WP_000116695.1;Parent=gene-AB11_RS21835;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AB11_RS21835;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 90058 90681 . - . ID=gene-AB11_RS21840;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AB11_RS21840;old_locus_tag=AB11_4183 NZ_JHDH01000158.1 Protein Homology CDS 90058 90681 . - 0 ID=cds-WP_000932839.1;Parent=gene-AB11_RS21840;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AB11_RS21840;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 90745 92634 . - . ID=gene-AB11_RS21845;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AB11_RS21845;old_locus_tag=AB11_4184 NZ_JHDH01000158.1 Protein Homology CDS 90745 92634 . - 0 ID=cds-WP_000499788.1;Parent=gene-AB11_RS21845;Dbxref=GenBank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AB11_RS21845;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 93013 93456 . - . ID=gene-AB11_RS21850;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AB11_RS21850;old_locus_tag=AB11_4185 NZ_JHDH01000158.1 Protein Homology CDS 93013 93456 . - 0 ID=cds-WP_000763723.1;Parent=gene-AB11_RS21850;Dbxref=GenBank:WP_000763723.1;Name=WP_000763723.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AB11_RS21850;product=FMN-binding protein MioC;protein_id=WP_000763723.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 93546 94004 . - . ID=gene-AB11_RS21855;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AB11_RS21855;old_locus_tag=AB11_4186 NZ_JHDH01000158.1 Protein Homology CDS 93546 94004 . - 0 ID=cds-WP_000432970.1;Parent=gene-AB11_RS21855;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AB11_RS21855;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 94156 95148 . + . ID=gene-AB11_RS21860;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AB11_RS21860;old_locus_tag=AB11_4187 NZ_JHDH01000158.1 Protein Homology CDS 94156 95148 . + 0 ID=cds-WP_000845113.1;Parent=gene-AB11_RS21860;Dbxref=GenBank:WP_000845113.1;Name=WP_000845113.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AB11_RS21860;product=aspartate--ammonia ligase;protein_id=WP_000845113.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 95153 96604 . - . ID=gene-AB11_RS21865;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AB11_RS21865;old_locus_tag=AB11_4188 NZ_JHDH01000158.1 Protein Homology CDS 95153 96604 . - 0 ID=cds-WP_000956642.1;Parent=gene-AB11_RS21865;Dbxref=GenBank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AB11_RS21865;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 96598 98094 . - . ID=gene-AB11_RS21870;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AB11_RS21870;old_locus_tag=AB11_4189 NZ_JHDH01000158.1 Protein Homology CDS 96598 98094 . - 0 ID=cds-WP_001299914.1;Parent=gene-AB11_RS21870;Dbxref=GenBank:WP_001299914.1;Name=WP_001299914.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AB11_RS21870;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 98317 100185 . + . ID=gene-AB11_RS21875;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AB11_RS21875;old_locus_tag=AB11_4190 NZ_JHDH01000158.1 Protein Homology CDS 98317 100185 . + 0 ID=cds-WP_000102319.1;Parent=gene-AB11_RS21875;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AB11_RS21875;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 100352 100771 . + . ID=gene-AB11_RS21880;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AB11_RS21880;old_locus_tag=AB11_4191 NZ_JHDH01000158.1 Protein Homology CDS 100352 100771 . + 0 ID=cds-WP_001301979.1;Parent=gene-AB11_RS21880;Dbxref=GenBank:WP_001301979.1;Name=WP_001301979.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312717.1;locus_tag=AB11_RS21880;product=D-ribose pyranase;protein_id=WP_001301979.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 100779 102284 . + . ID=gene-AB11_RS21885;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AB11_RS21885;old_locus_tag=AB11_4192 NZ_JHDH01000158.1 Protein Homology CDS 100779 102284 . + 0 ID=cds-WP_000387770.1;Parent=gene-AB11_RS21885;Dbxref=GenBank:WP_000387770.1;Name=WP_000387770.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AB11_RS21885;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387770.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 102289 103254 . + . ID=gene-AB11_RS21890;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AB11_RS21890;old_locus_tag=AB11_4193 NZ_JHDH01000158.1 Protein Homology CDS 102289 103254 . + 0 ID=cds-WP_000211858.1;Parent=gene-AB11_RS21890;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AB11_RS21890;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 103279 104169 . + . ID=gene-AB11_RS21895;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AB11_RS21895;old_locus_tag=AB11_4194 NZ_JHDH01000158.1 Protein Homology CDS 103279 104169 . + 0 ID=cds-WP_001056273.1;Parent=gene-AB11_RS21895;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AB11_RS21895;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 104295 105224 . + . ID=gene-AB11_RS21900;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AB11_RS21900;old_locus_tag=AB11_4195 NZ_JHDH01000158.1 Protein Homology CDS 104295 105224 . + 0 ID=cds-WP_032224029.1;Parent=gene-AB11_RS21900;Dbxref=GenBank:WP_032224029.1;Name=WP_032224029.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AB11_RS21900;product=ribokinase;protein_id=WP_032224029.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 105228 106220 . + . ID=gene-AB11_RS21905;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AB11_RS21905;old_locus_tag=AB11_4196 NZ_JHDH01000158.1 Protein Homology CDS 105228 106220 . + 0 ID=cds-WP_077699308.1;Parent=gene-AB11_RS21905;Dbxref=GenBank:WP_077699308.1;Name=WP_077699308.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AB11_RS21905;product=ribose operon transcriptional repressor RbsR;protein_id=WP_077699308.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 106186 107613 . - . ID=gene-AB11_RS21910;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB11_RS21910;old_locus_tag=AB11_4197 NZ_JHDH01000158.1 Protein Homology CDS 106186 107613 . - 0 ID=cds-WP_032224027.1;Parent=gene-AB11_RS21910;Dbxref=GenBank:WP_032224027.1;Name=WP_032224027.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AB11_RS21910;product=multidrug transporter subunit MdtD;protein_id=WP_032224027.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 107636 108328 . - . ID=gene-AB11_RS21915;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AB11_RS21915;old_locus_tag=AB11_4198 NZ_JHDH01000158.1 Protein Homology CDS 107636 108328 . - 0 ID=cds-WP_001131164.1;Parent=gene-AB11_RS21915;Dbxref=GenBank:WP_001131164.1;Name=WP_001131164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AB11_RS21915;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131164.1;transl_table=11 NZ_JHDH01000158.1 RefSeq gene 108809 110119 . + . ID=gene-AB11_RS21920;Name=AB11_RS21920;end_range=110119,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS21920;old_locus_tag=AB11_4199;partial=true NZ_JHDH01000158.1 cmsearch rRNA 108809 110119 . + . ID=rna-AB11_RS21920;Parent=gene-AB11_RS21920;Dbxref=RFAM:RF00177;end_range=110119,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21920;partial=true;product=16S ribosomal RNA NZ_JHDH01000158.1 cmsearch exon 108809 110119 . + . ID=exon-AB11_RS21920-1;Parent=rna-AB11_RS21920;Dbxref=RFAM:RF00177;end_range=110119,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21920;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000159.1 1 82569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000159.1 RefSeq region 1 82569 . + . ID=NZ_JHDH01000159.1:1..82569;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000159.1 RefSeq gene 1 298 . + . ID=gene-AB11_RS21925;Name=AB11_RS21925;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS21925;partial=true;start_range=.,1 NZ_JHDH01000159.1 cmsearch rRNA 1 298 . + . ID=rna-AB11_RS21925;Parent=gene-AB11_RS21925;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21925;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000159.1 cmsearch exon 1 298 . + . ID=exon-AB11_RS21925-1;Parent=rna-AB11_RS21925;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21925;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDH01000159.1 RefSeq gene 393 508 . + . ID=gene-AB11_RS21930;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS21930;old_locus_tag=AB11_4200 NZ_JHDH01000159.1 cmsearch rRNA 393 508 . + . ID=rna-AB11_RS21930;Parent=gene-AB11_RS21930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21930;product=5S ribosomal RNA NZ_JHDH01000159.1 cmsearch exon 393 508 . + . ID=exon-AB11_RS21930-1;Parent=rna-AB11_RS21930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS21930;product=5S ribosomal RNA NZ_JHDH01000159.1 RefSeq gene 563 639 . + . ID=gene-AB11_RS21935;Name=AB11_RS21935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS21935;old_locus_tag=AB11_4201 NZ_JHDH01000159.1 tRNAscan-SE tRNA 563 639 . + . ID=rna-AB11_RS21935;Parent=gene-AB11_RS21935;anticodon=(pos:597..599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21935;product=tRNA-Asp NZ_JHDH01000159.1 tRNAscan-SE exon 563 639 . + . ID=exon-AB11_RS21935-1;Parent=rna-AB11_RS21935;anticodon=(pos:597..599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21935;product=tRNA-Asp NZ_JHDH01000159.1 RefSeq gene 648 723 . + . ID=gene-AB11_RS21940;Name=AB11_RS21940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS21940;old_locus_tag=AB11_4202 NZ_JHDH01000159.1 tRNAscan-SE tRNA 648 723 . + . ID=rna-AB11_RS21940;Parent=gene-AB11_RS21940;anticodon=(pos:681..683);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21940;product=tRNA-Trp NZ_JHDH01000159.1 tRNAscan-SE exon 648 723 . + . ID=exon-AB11_RS21940-1;Parent=rna-AB11_RS21940;anticodon=(pos:681..683);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS21940;product=tRNA-Trp NZ_JHDH01000159.1 RefSeq gene 819 1658 . - . ID=gene-AB11_RS21945;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AB11_RS21945;old_locus_tag=AB11_4203 NZ_JHDH01000159.1 Protein Homology CDS 819 1658 . - 0 ID=cds-WP_001398063.1;Parent=gene-AB11_RS21945;Dbxref=GenBank:WP_001398063.1;Name=WP_001398063.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709570.1;locus_tag=AB11_RS21945;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001398063.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 1777 2115 . + . ID=gene-AB11_RS21950;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AB11_RS21950;old_locus_tag=AB11_4204 NZ_JHDH01000159.1 Protein Homology CDS 1777 2115 . + 0 ID=cds-WP_000841001.1;Parent=gene-AB11_RS21950;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AB11_RS21950;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 2140 3660 . - . ID=gene-AB11_RS21955;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AB11_RS21955;old_locus_tag=AB11_4205 NZ_JHDH01000159.1 Protein Homology CDS 2140 3660 . - 0 ID=cds-WP_000058964.1;Parent=gene-AB11_RS21955;Dbxref=GenBank:WP_000058964.1;Name=WP_000058964.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AB11_RS21955;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058964.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 4013 4111 . + . ID=gene-AB11_RS21960;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AB11_RS21960 NZ_JHDH01000159.1 Protein Homology CDS 4013 4111 . + 0 ID=cds-WP_001311244.1;Parent=gene-AB11_RS21960;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AB11_RS21960;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 4198 4248 . + . ID=gene-AB11_RS21965;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AB11_RS21965 NZ_JHDH01000159.1 Protein Homology CDS 4198 4248 . + 0 ID=cds-WP_001387183.1;Parent=gene-AB11_RS21965;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AB11_RS21965;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 4251 5897 . + . ID=gene-AB11_RS21970;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AB11_RS21970;old_locus_tag=AB11_4206 NZ_JHDH01000159.1 Protein Homology CDS 4251 5897 . + 0 ID=cds-WP_001012608.1;Parent=gene-AB11_RS21970;Dbxref=GenBank:WP_001012608.1;Name=WP_001012608.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AB11_RS21970;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012608.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 5894 6157 . + . ID=gene-AB11_RS21975;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AB11_RS21975;old_locus_tag=AB11_4207 NZ_JHDH01000159.1 Protein Homology CDS 5894 6157 . + 0 ID=cds-WP_000983255.1;Parent=gene-AB11_RS21975;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AB11_RS21975;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 6177 7106 . + . ID=gene-AB11_RS21980;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AB11_RS21980;old_locus_tag=AB11_4208 NZ_JHDH01000159.1 Protein Homology CDS 6177 7106 . + 0 ID=cds-WP_000208520.1;Parent=gene-AB11_RS21980;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AB11_RS21980;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 7171 9021 . + . ID=gene-AB11_RS21985;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AB11_RS21985;old_locus_tag=AB11_4209 NZ_JHDH01000159.1 Protein Homology CDS 7171 9021 . + 0 ID=cds-WP_001127399.1;Parent=gene-AB11_RS21985;Dbxref=GenBank:WP_001127399.1;Name=WP_001127399.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AB11_RS21985;product=dihydroxy-acid dehydratase;protein_id=WP_001127399.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 9024 10568 . + . ID=gene-AB11_RS21990;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AB11_RS21990;old_locus_tag=AB11_4210 NZ_JHDH01000159.1 Protein Homology CDS 9024 10568 . + 0 ID=cds-WP_000785596.1;Parent=gene-AB11_RS21990;Dbxref=GenBank:WP_000785596.1;Name=WP_000785596.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418220.1;locus_tag=AB11_RS21990;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785596.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 10620 11513 . - . ID=gene-AB11_RS21995;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AB11_RS21995;old_locus_tag=AB11_4211 NZ_JHDH01000159.1 Protein Homology CDS 10620 11513 . - 0 ID=cds-WP_000365791.1;Parent=gene-AB11_RS21995;Dbxref=GenBank:WP_000365791.1;Name=WP_000365791.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AB11_RS21995;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365791.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 11663 13138 . + . ID=gene-AB11_RS22000;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AB11_RS22000;old_locus_tag=AB11_4212 NZ_JHDH01000159.1 Protein Homology CDS 11663 13138 . + 0 ID=cds-WP_000024939.1;Parent=gene-AB11_RS22000;Dbxref=GenBank:WP_000024939.1;Name=WP_000024939.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AB11_RS22000;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 13184 13465 . - . ID=gene-AB11_RS22005;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AB11_RS22005;old_locus_tag=AB11_4213 NZ_JHDH01000159.1 Protein Homology CDS 13184 13465 . - 0 ID=cds-WP_001140251.1;Parent=gene-AB11_RS22005;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AB11_RS22005;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 13664 14113 . - . ID=gene-AB11_RS22010;Name=AB11_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS22010;old_locus_tag=AB11_4214 NZ_JHDH01000159.1 Protein Homology CDS 13664 14113 . - 0 ID=cds-WP_000996702.1;Parent=gene-AB11_RS22010;Dbxref=GenBank:WP_000996702.1;Name=WP_000996702.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AB11_RS22010;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_000996702.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 14330 16351 . + . ID=gene-AB11_RS22015;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AB11_RS22015;old_locus_tag=AB11_4215 NZ_JHDH01000159.1 Protein Homology CDS 14330 16351 . + 0 ID=cds-WP_001238890.1;Parent=gene-AB11_RS22015;Dbxref=GenBank:WP_001238890.1;Name=WP_001238890.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AB11_RS22015;product=DNA helicase Rep;protein_id=WP_001238890.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 16398 17882 . - . ID=gene-AB11_RS22020;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AB11_RS22020;old_locus_tag=AB11_4216 NZ_JHDH01000159.1 Protein Homology CDS 16398 17882 . - 0 ID=cds-WP_000535975.1;Parent=gene-AB11_RS22020;Dbxref=GenBank:WP_000535975.1;Name=WP_000535975.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AB11_RS22020;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_000535975.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 18016 19281 . - . ID=gene-AB11_RS22025;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AB11_RS22025;old_locus_tag=AB11_4217 NZ_JHDH01000159.1 Protein Homology CDS 18016 19281 . - 0 ID=cds-WP_000047499.1;Parent=gene-AB11_RS22025;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AB11_RS22025;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 19412 19741 . + . ID=gene-AB11_RS22030;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AB11_RS22030;old_locus_tag=AB11_4218 NZ_JHDH01000159.1 Protein Homology CDS 19412 19741 . + 0 ID=cds-WP_001280776.1;Parent=gene-AB11_RS22030;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AB11_RS22030;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 19882 19983 . + . ID=gene-AB11_RS22035;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AB11_RS22035 NZ_JHDH01000159.1 Protein Homology CDS 19882 19983 . + 0 ID=cds-WP_001295255.1;Parent=gene-AB11_RS22035;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AB11_RS22035;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 20068 21327 . + . ID=gene-AB11_RS22040;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AB11_RS22040;old_locus_tag=AB11_4219 NZ_JHDH01000159.1 Protein Homology CDS 20068 21327 . + 0 ID=cds-WP_001054527.1;Parent=gene-AB11_RS22040;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AB11_RS22040;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 21567 22670 . + . ID=gene-AB11_RS22045;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AB11_RS22045;old_locus_tag=AB11_4221 NZ_JHDH01000159.1 Protein Homology CDS 21567 22670 . + 0 ID=cds-WP_001050971.1;Parent=gene-AB11_RS22045;Dbxref=GenBank:WP_001050971.1;Name=WP_001050971.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312744.1;locus_tag=AB11_RS22045;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050971.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 22682 23728 . + . ID=gene-AB11_RS22050;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AB11_RS22050;old_locus_tag=AB11_4222 NZ_JHDH01000159.1 Protein Homology CDS 22682 23728 . + 0 ID=cds-WP_001295256.1;Parent=gene-AB11_RS22050;Dbxref=GenBank:WP_001295256.1;Name=WP_001295256.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AB11_RS22050;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001295256.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 23784 24914 . + . ID=gene-AB11_RS22055;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AB11_RS22055;old_locus_tag=AB11_4223 NZ_JHDH01000159.1 Protein Homology CDS 23784 24914 . + 0 ID=cds-WP_000866670.1;Parent=gene-AB11_RS22055;Dbxref=GenBank:WP_000866670.1;Name=WP_000866670.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AB11_RS22055;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866670.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 24911 26173 . + . ID=gene-AB11_RS22060;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AB11_RS22060;old_locus_tag=AB11_4224 NZ_JHDH01000159.1 Protein Homology CDS 24911 26173 . + 0 ID=cds-WP_000006621.1;Parent=gene-AB11_RS22060;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AB11_RS22060;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 26173 27240 . + . ID=gene-AB11_RS22065;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AB11_RS22065;old_locus_tag=AB11_4225 NZ_JHDH01000159.1 Protein Homology CDS 26173 27240 . + 0 ID=cds-WP_001226602.1;Parent=gene-AB11_RS22065;Dbxref=GenBank:WP_001226602.1;Name=WP_001226602.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AB11_RS22065;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226602.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 27259 28140 . + . ID=gene-AB11_RS22070;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AB11_RS22070;old_locus_tag=AB11_4226 NZ_JHDH01000159.1 Protein Homology CDS 27259 28140 . + 0 ID=cds-WP_000676056.1;Parent=gene-AB11_RS22070;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AB11_RS22070;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 28118 28792 . + . ID=gene-AB11_RS22075;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AB11_RS22075;old_locus_tag=AB11_4227 NZ_JHDH01000159.1 Protein Homology CDS 28118 28792 . + 0 ID=cds-WP_001145183.1;Parent=gene-AB11_RS22075;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AB11_RS22075;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 28797 29927 . + . ID=gene-AB11_RS22080;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AB11_RS22080;old_locus_tag=AB11_4228 NZ_JHDH01000159.1 Protein Homology CDS 28797 29927 . + 0 ID=cds-WP_000612043.1;Parent=gene-AB11_RS22080;Dbxref=GenBank:WP_000612043.1;Name=WP_000612043.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AB11_RS22080;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612043.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 29929 31179 . + . ID=gene-AB11_RS22085;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AB11_RS22085;old_locus_tag=AB11_4229 NZ_JHDH01000159.1 Protein Homology CDS 29929 31179 . + 0 ID=cds-WP_000050265.1;Parent=gene-AB11_RS22085;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AB11_RS22085;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 31176 32255 . + . ID=gene-AB11_RS22090;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AB11_RS22090;old_locus_tag=AB11_4230 NZ_JHDH01000159.1 Protein Homology CDS 31176 32255 . + 0 ID=cds-WP_000217245.1;Parent=gene-AB11_RS22090;Dbxref=GenBank:WP_000217245.1;Name=WP_000217245.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AB11_RS22090;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217245.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 32252 33604 . + . ID=gene-AB11_RS22095;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AB11_RS22095;old_locus_tag=AB11_4231 NZ_JHDH01000159.1 Protein Homology CDS 32252 33604 . + 0 ID=cds-WP_000055129.1;Parent=gene-AB11_RS22095;Dbxref=GenBank:WP_000055129.1;Name=WP_000055129.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418241.1;locus_tag=AB11_RS22095;product=ECA oligosaccharide polymerase;protein_id=WP_000055129.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 33607 34347 . + . ID=gene-AB11_RS22100;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AB11_RS22100;old_locus_tag=AB11_4232 NZ_JHDH01000159.1 Protein Homology CDS 33607 34347 . + 0 ID=cds-WP_001064040.1;Parent=gene-AB11_RS22100;Dbxref=GenBank:WP_001064040.1;Name=WP_001064040.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AB11_RS22100;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064040.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 34538 35923 . + . ID=gene-AB11_RS22105;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AB11_RS22105;old_locus_tag=AB11_4233 NZ_JHDH01000159.1 Protein Homology CDS 34538 35923 . + 0 ID=cds-WP_000774731.1;Parent=gene-AB11_RS22105;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AB11_RS22105;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 36026 36102 . + . ID=gene-AB11_RS22110;Name=AB11_RS22110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS22110;old_locus_tag=AB11_4234 NZ_JHDH01000159.1 tRNAscan-SE tRNA 36026 36102 . + . ID=rna-AB11_RS22110;Parent=gene-AB11_RS22110;anticodon=(pos:36060..36062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22110;product=tRNA-Arg NZ_JHDH01000159.1 tRNAscan-SE exon 36026 36102 . + . ID=exon-AB11_RS22110-1;Parent=rna-AB11_RS22110;anticodon=(pos:36060..36062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22110;product=tRNA-Arg NZ_JHDH01000159.1 RefSeq gene 36161 36236 . + . ID=gene-AB11_RS22115;Name=AB11_RS22115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS22115;old_locus_tag=AB11_4235 NZ_JHDH01000159.1 tRNAscan-SE tRNA 36161 36236 . + . ID=rna-AB11_RS22115;Parent=gene-AB11_RS22115;anticodon=(pos:36194..36196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22115;product=tRNA-His NZ_JHDH01000159.1 tRNAscan-SE exon 36161 36236 . + . ID=exon-AB11_RS22115-1;Parent=rna-AB11_RS22115;anticodon=(pos:36194..36196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22115;product=tRNA-His NZ_JHDH01000159.1 RefSeq gene 36257 36343 . + . ID=gene-AB11_RS22120;Name=AB11_RS22120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS22120;old_locus_tag=AB11_4236 NZ_JHDH01000159.1 tRNAscan-SE tRNA 36257 36343 . + . ID=rna-AB11_RS22120;Parent=gene-AB11_RS22120;anticodon=(pos:36291..36293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22120;product=tRNA-Leu NZ_JHDH01000159.1 tRNAscan-SE exon 36257 36343 . + . ID=exon-AB11_RS22120-1;Parent=rna-AB11_RS22120;anticodon=(pos:36291..36293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22120;product=tRNA-Leu NZ_JHDH01000159.1 RefSeq gene 36386 36462 . + . ID=gene-AB11_RS22125;Name=AB11_RS22125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS22125;old_locus_tag=AB11_4237 NZ_JHDH01000159.1 tRNAscan-SE tRNA 36386 36462 . + . ID=rna-AB11_RS22125;Parent=gene-AB11_RS22125;anticodon=(pos:36420..36422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22125;product=tRNA-Pro NZ_JHDH01000159.1 tRNAscan-SE exon 36386 36462 . + . ID=exon-AB11_RS22125-1;Parent=rna-AB11_RS22125;anticodon=(pos:36420..36422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22125;product=tRNA-Pro NZ_JHDH01000159.1 RefSeq gene 36609 37844 . + . ID=gene-AB11_RS22130;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AB11_RS22130;old_locus_tag=AB11_4238 NZ_JHDH01000159.1 Protein Homology CDS 36609 37844 . + 0 ID=cds-WP_000941535.1;Parent=gene-AB11_RS22130;Dbxref=GenBank:WP_000941535.1;Name=WP_000941535.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312757.1;locus_tag=AB11_RS22130;product=anaerobic sulfatase maturase;protein_id=WP_000941535.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 38012 39667 . - . ID=gene-AB11_RS22135;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=AB11_RS22135;old_locus_tag=AB11_4239 NZ_JHDH01000159.1 Protein Homology CDS 38012 39667 . - 0 ID=cds-WP_000406041.1;Parent=gene-AB11_RS22135;Dbxref=GenBank:WP_000406041.1;Name=WP_000406041.1;gbkey=CDS;gene=aslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AB11_RS22135;product=arylsulfatase AslA;protein_id=WP_000406041.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 40346 41542 . - . ID=gene-AB11_RS22140;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AB11_RS22140;old_locus_tag=AB11_4241 NZ_JHDH01000159.1 Protein Homology CDS 40346 41542 . - 0 ID=cds-WP_032224036.1;Parent=gene-AB11_RS22140;Dbxref=GenBank:WP_032224036.1;Name=WP_032224036.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AB11_RS22140;product=protoheme IX biogenesis protein HemY;protein_id=WP_032224036.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 41545 42792 . - . ID=gene-AB11_RS22145;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AB11_RS22145;old_locus_tag=AB11_4242 NZ_JHDH01000159.1 Protein Homology CDS 41545 42792 . - 0 ID=cds-WP_000139038.1;Parent=gene-AB11_RS22145;Dbxref=GenBank:WP_000139038.1;Name=WP_000139038.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418247.1;locus_tag=AB11_RS22145;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000139038.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 42814 43554 . - . ID=gene-AB11_RS22150;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AB11_RS22150;old_locus_tag=AB11_4243 NZ_JHDH01000159.1 Protein Homology CDS 42814 43554 . - 0 ID=cds-WP_000026049.1;Parent=gene-AB11_RS22150;Dbxref=GenBank:WP_000026049.1;Name=WP_000026049.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AB11_RS22150;product=uroporphyrinogen-III synthase;protein_id=WP_000026049.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 43551 44492 . - . ID=gene-AB11_RS22155;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AB11_RS22155;old_locus_tag=AB11_4244 NZ_JHDH01000159.1 Protein Homology CDS 43551 44492 . - 0 ID=cds-WP_001338644.1;Parent=gene-AB11_RS22155;Dbxref=GenBank:WP_001338644.1;Name=WP_001338644.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AB11_RS22155;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 44879 47425 . + . ID=gene-AB11_RS22160;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AB11_RS22160;old_locus_tag=AB11_4245 NZ_JHDH01000159.1 Protein Homology CDS 44879 47425 . + 0 ID=cds-WP_000281668.1;Parent=gene-AB11_RS22160;Dbxref=GenBank:WP_000281668.1;Name=WP_000281668.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AB11_RS22160;product=class I adenylate cyclase;protein_id=WP_000281668.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 47465 47785 . - . ID=gene-AB11_RS22165;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AB11_RS22165;old_locus_tag=AB11_4246 NZ_JHDH01000159.1 Protein Homology CDS 47465 47785 . - 0 ID=cds-WP_000999947.1;Parent=gene-AB11_RS22165;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AB11_RS22165;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JHDH01000159.1 RefSeq pseudogene 47911 48089 . - . ID=gene-AB11_RS25630;Name=AB11_RS25630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25630;partial=true;pseudo=true;start_range=.,47911 NZ_JHDH01000159.1 Protein Homology CDS 47911 48089 . - 0 ID=cds-AB11_RS25630;Parent=gene-AB11_RS25630;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AB11_RS25630;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,47911;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 48248 48451 . + . ID=gene-AB11_RS22170;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AB11_RS22170;old_locus_tag=AB11_4248 NZ_JHDH01000159.1 Protein Homology CDS 48248 48451 . + 0 ID=cds-WP_032224039.1;Parent=gene-AB11_RS22170;Dbxref=GenBank:WP_032224039.1;Name=WP_032224039.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AB11_RS22170;product=LPS translocon maturation chaperone LptM;protein_id=WP_032224039.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 48488 49312 . + . ID=gene-AB11_RS22175;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AB11_RS22175;old_locus_tag=AB11_4249 NZ_JHDH01000159.1 Protein Homology CDS 48488 49312 . + 0 ID=cds-WP_001160654.1;Parent=gene-AB11_RS22175;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AB11_RS22175;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 49309 50016 . + . ID=gene-AB11_RS22180;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AB11_RS22180;old_locus_tag=AB11_4250 NZ_JHDH01000159.1 Protein Homology CDS 49309 50016 . + 0 ID=cds-WP_000812796.1;Parent=gene-AB11_RS22180;Dbxref=GenBank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AB11_RS22180;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 50013 50909 . + . ID=gene-AB11_RS22185;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AB11_RS22185;old_locus_tag=AB11_4251 NZ_JHDH01000159.1 Protein Homology CDS 50013 50909 . + 0 ID=cds-WP_000130691.1;Parent=gene-AB11_RS22185;Dbxref=GenBank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AB11_RS22185;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 50909 51625 . + . ID=gene-AB11_RS22190;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AB11_RS22190;old_locus_tag=AB11_4252 NZ_JHDH01000159.1 Protein Homology CDS 50909 51625 . + 0 ID=cds-WP_001213584.1;Parent=gene-AB11_RS22190;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AB11_RS22190;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 51709 53871 . + . ID=gene-AB11_RS22195;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AB11_RS22195;old_locus_tag=AB11_4253 NZ_JHDH01000159.1 Protein Homology CDS 51709 53871 . + 0 ID=cds-WP_001395093.1;Parent=gene-AB11_RS22195;Dbxref=GenBank:WP_001395093.1;Name=WP_001395093.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AB11_RS22195;product=DNA helicase II;protein_id=WP_001395093.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 54018 54782 . - . ID=gene-AB11_RS22200;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AB11_RS22200;old_locus_tag=AB11_4254 NZ_JHDH01000159.1 Protein Homology CDS 54018 54782 . - 0 ID=cds-WP_000951133.1;Parent=gene-AB11_RS22200;Dbxref=GenBank:WP_000951133.1;Name=WP_000951133.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AB11_RS22200;product=phosphodiester glycosidase family protein;protein_id=WP_000951133.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 54944 55000 . + . ID=gene-AB11_RS25395;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AB11_RS25395 NZ_JHDH01000159.1 Protein Homology CDS 54944 55000 . + 0 ID=cds-WP_211180520.1;Parent=gene-AB11_RS25395;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AB11_RS25395;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 55152 56102 . + . ID=gene-AB11_RS22205;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AB11_RS22205;old_locus_tag=AB11_4256 NZ_JHDH01000159.1 Protein Homology CDS 55152 56102 . + 0 ID=cds-WP_000947159.1;Parent=gene-AB11_RS22205;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AB11_RS22205;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 56145 56525 . - . ID=gene-AB11_RS22210;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AB11_RS22210;old_locus_tag=AB11_4257 NZ_JHDH01000159.1 Protein Homology CDS 56145 56525 . - 0 ID=cds-WP_000032581.1;Parent=gene-AB11_RS22210;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AB11_RS22210;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 56539 56919 . - . ID=gene-AB11_RS22215;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AB11_RS22215;old_locus_tag=AB11_4258 NZ_JHDH01000159.1 Protein Homology CDS 56539 56919 . - 0 ID=cds-WP_000944218.1;Parent=gene-AB11_RS22215;Dbxref=GenBank:WP_000944218.1;Name=WP_000944218.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AB11_RS22215;product=protein YigG;protein_id=WP_000944218.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 57014 57904 . - . ID=gene-AB11_RS22220;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AB11_RS22220;old_locus_tag=AB11_4259 NZ_JHDH01000159.1 Protein Homology CDS 57014 57904 . - 0 ID=cds-WP_000339104.1;Parent=gene-AB11_RS22220;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AB11_RS22220;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 57956 58423 . - . ID=gene-AB11_RS22225;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AB11_RS22225;old_locus_tag=AB11_4260 NZ_JHDH01000159.1 Protein Homology CDS 57956 58423 . - 0 ID=cds-WP_001277142.1;Parent=gene-AB11_RS22225;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AB11_RS22225;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 58588 59457 . + . ID=gene-AB11_RS22230;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AB11_RS22230;old_locus_tag=AB11_4261 NZ_JHDH01000159.1 Protein Homology CDS 58588 59457 . + 0 ID=cds-WP_001259700.1;Parent=gene-AB11_RS22230;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AB11_RS22230;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 59590 61419 . + . ID=gene-AB11_RS22235;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AB11_RS22235;old_locus_tag=AB11_4262 NZ_JHDH01000159.1 Protein Homology CDS 59590 61419 . + 0 ID=cds-WP_000035581.1;Parent=gene-AB11_RS22235;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AB11_RS22235;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 61483 62103 . + . ID=gene-AB11_RS22240;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AB11_RS22240;old_locus_tag=AB11_4263 NZ_JHDH01000159.1 Protein Homology CDS 61483 62103 . + 0 ID=cds-WP_000928824.1;Parent=gene-AB11_RS22240;Dbxref=GenBank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AB11_RS22240;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 62165 62785 . - . ID=gene-AB11_RS22245;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AB11_RS22245;old_locus_tag=AB11_4264 NZ_JHDH01000159.1 Protein Homology CDS 62165 62785 . - 0 ID=cds-WP_000171710.1;Parent=gene-AB11_RS22245;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AB11_RS22245;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 62896 63918 . + . ID=gene-AB11_RS22250;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AB11_RS22250;old_locus_tag=AB11_4265 NZ_JHDH01000159.1 Protein Homology CDS 62896 63918 . + 0 ID=cds-WP_000487654.1;Parent=gene-AB11_RS22250;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AB11_RS22250;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 63926 64726 . + . ID=gene-AB11_RS22255;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AB11_RS22255;old_locus_tag=AB11_4266 NZ_JHDH01000159.1 Protein Homology CDS 63926 64726 . + 0 ID=cds-WP_000285362.1;Parent=gene-AB11_RS22255;Dbxref=GenBank:WP_000285362.1;Name=WP_000285362.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026267.1;locus_tag=AB11_RS22255;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285362.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 64802 65701 . + . ID=gene-AB11_RS22260;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AB11_RS22260;old_locus_tag=AB11_4267 NZ_JHDH01000159.1 Protein Homology CDS 64802 65701 . + 0 ID=cds-WP_001196238.1;Parent=gene-AB11_RS22260;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AB11_RS22260;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 65589 66542 . - . ID=gene-AB11_RS22265;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AB11_RS22265 NZ_JHDH01000159.1 Protein Homology CDS 65589 66542 . - 0 ID=cds-WP_000573621.1;Parent=gene-AB11_RS22265;Dbxref=GenBank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AB11_RS22265;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11 NZ_JHDH01000159.1 RefSeq pseudogene 66779 69037 . + . ID=gene-AB11_RS22270;Name=metE;end_range=69037,.;gbkey=Gene;gene=metE;gene_biotype=pseudogene;locus_tag=AB11_RS22270;old_locus_tag=AB11_4268;partial=true;pseudo=true NZ_JHDH01000159.1 Protein Homology CDS 66779 69037 . + 0 ID=cds-AB11_RS22270;Parent=gene-AB11_RS22270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;end_range=69037,.;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AB11_RS22270;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 69080 69895 . - . ID=gene-AB11_RS22275;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AB11_RS22275 NZ_JHDH01000159.1 Protein Homology CDS 69080 69895 . - 0 ID=cds-WP_001300821.1;Parent=gene-AB11_RS22275;Dbxref=GenBank:WP_001300821.1;Name=WP_001300821.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312787.2;locus_tag=AB11_RS22275;product=dienelactone hydrolase family protein;protein_id=WP_001300821.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 70157 70918 . + . ID=gene-AB11_RS22280;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AB11_RS22280;old_locus_tag=AB11_4269 NZ_JHDH01000159.1 Protein Homology CDS 70157 70918 . + 0 ID=cds-WP_000045180.1;Parent=gene-AB11_RS22280;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AB11_RS22280;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 71059 72486 . + . ID=gene-AB11_RS22285;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AB11_RS22285;old_locus_tag=AB11_4270 NZ_JHDH01000159.1 Protein Homology CDS 71059 72486 . + 0 ID=cds-WP_000347714.1;Parent=gene-AB11_RS22285;Dbxref=GenBank:WP_000347714.1;Name=WP_000347714.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AB11_RS22285;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 72581 73336 . + . ID=gene-AB11_RS22290;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AB11_RS22290;old_locus_tag=AB11_4271 NZ_JHDH01000159.1 Protein Homology CDS 72581 73336 . + 0 ID=cds-WP_000227958.1;Parent=gene-AB11_RS22290;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AB11_RS22290;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 73350 73955 . + . ID=gene-AB11_RS22295;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AB11_RS22295;old_locus_tag=AB11_4272 NZ_JHDH01000159.1 Protein Homology CDS 73350 73955 . + 0 ID=cds-WP_001295259.1;Parent=gene-AB11_RS22295;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AB11_RS22295;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 73952 75592 . + . ID=gene-AB11_RS22300;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AB11_RS22300;old_locus_tag=AB11_4273 NZ_JHDH01000159.1 Protein Homology CDS 73952 75592 . + 0 ID=cds-WP_000187530.1;Parent=gene-AB11_RS22300;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AB11_RS22300;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 75671 75940 . + . ID=gene-AB11_RS22305;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AB11_RS22305;old_locus_tag=AB11_4274 NZ_JHDH01000159.1 Protein Homology CDS 75671 75940 . + 0 ID=cds-WP_001351992.1;Parent=gene-AB11_RS22305;Dbxref=GenBank:WP_001351992.1;Name=WP_001351992.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AB11_RS22305;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001351992.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 75944 76459 . + . ID=gene-AB11_RS22310;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AB11_RS22310;old_locus_tag=AB11_4275 NZ_JHDH01000159.1 Protein Homology CDS 75944 76459 . + 0 ID=cds-WP_000459594.1;Parent=gene-AB11_RS22310;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AB11_RS22310;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 76462 77238 . + . ID=gene-AB11_RS22315;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AB11_RS22315;old_locus_tag=AB11_4276 NZ_JHDH01000159.1 Protein Homology CDS 76462 77238 . + 0 ID=cds-WP_000109943.1;Parent=gene-AB11_RS22315;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AB11_RS22315;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 77280 78062 . + . ID=gene-AB11_RS22320;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AB11_RS22320;old_locus_tag=AB11_4277 NZ_JHDH01000159.1 Protein Homology CDS 77280 78062 . + 0 ID=cds-WP_001301305.1;Parent=gene-AB11_RS22320;Dbxref=GenBank:WP_001301305.1;Name=WP_001301305.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=AB11_RS22320;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001301305.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 78059 78547 . - . ID=gene-AB11_RS22325;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AB11_RS22325;old_locus_tag=AB11_4278 NZ_JHDH01000159.1 Protein Homology CDS 78059 78547 . - 0 ID=cds-WP_001192396.1;Parent=gene-AB11_RS22325;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AB11_RS22325;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 78714 80207 . + . ID=gene-AB11_RS22330;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AB11_RS22330;old_locus_tag=AB11_4279 NZ_JHDH01000159.1 Protein Homology CDS 78714 80207 . + 0 ID=cds-WP_000339804.1;Parent=gene-AB11_RS22330;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AB11_RS22330;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 80253 80954 . + . ID=gene-AB11_RS22335;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AB11_RS22335;old_locus_tag=AB11_4280 NZ_JHDH01000159.1 Protein Homology CDS 80253 80954 . + 0 ID=cds-WP_000209826.1;Parent=gene-AB11_RS22335;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AB11_RS22335;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JHDH01000159.1 RefSeq gene 81531 82569 . - . ID=gene-AB11_RS22340;Name=fadA;end_range=82569,.;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AB11_RS22340;old_locus_tag=AB11_4281;partial=true NZ_JHDH01000159.1 Protein Homology CDS 81531 82569 . - 1 ID=cds-WP_032224041.1;Parent=gene-AB11_RS22340;Dbxref=GenBank:WP_032224041.1;Name=WP_032224041.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;end_range=82569,.;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AB11_RS22340;partial=true;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_032224041.1;transl_table=11 ##sequence-region NZ_JHDH01000160.1 1 3451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000160.1 RefSeq region 1 3451 . + . ID=NZ_JHDH01000160.1:1..3451;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000160.1 RefSeq gene 17 2919 . + . ID=gene-AB11_RS22345;Name=AB11_RS22345;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22345;old_locus_tag=AB11_4282 NZ_JHDH01000160.1 cmsearch rRNA 17 2919 . + . ID=rna-AB11_RS22345;Parent=gene-AB11_RS22345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22345;product=23S ribosomal RNA NZ_JHDH01000160.1 cmsearch exon 17 2919 . + . ID=exon-AB11_RS22345-1;Parent=rna-AB11_RS22345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22345;product=23S ribosomal RNA NZ_JHDH01000160.1 RefSeq gene 3014 3129 . + . ID=gene-AB11_RS22350;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS22350;old_locus_tag=AB11_4284 NZ_JHDH01000160.1 cmsearch rRNA 3014 3129 . + . ID=rna-AB11_RS22350;Parent=gene-AB11_RS22350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22350;product=5S ribosomal RNA NZ_JHDH01000160.1 cmsearch exon 3014 3129 . + . ID=exon-AB11_RS22350-1;Parent=rna-AB11_RS22350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22350;product=5S ribosomal RNA NZ_JHDH01000160.1 RefSeq gene 3306 3451 . - . ID=gene-AB11_RS22355;Name=AB11_RS22355;end_range=3451,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS22355;old_locus_tag=AB11_4285;partial=true NZ_JHDH01000160.1 Protein Homology CDS 3306 3451 . - 2 ID=cds-WP_137419307.1;Parent=gene-AB11_RS22355;Dbxref=GenBank:WP_137419307.1;Name=WP_137419307.1;Ontology_term=GO:0015074;end_range=3451,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AB11_RS22355;partial=true;product=integrase core domain-containing protein;protein_id=WP_137419307.1;transl_table=11 ##sequence-region NZ_JHDH01000161.1 1 54607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000161.1 RefSeq region 1 54607 . + . ID=NZ_JHDH01000161.1:1..54607;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000161.1 RefSeq gene 245 772 . - . ID=gene-AB11_RS22360;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AB11_RS22360;old_locus_tag=AB11_4286 NZ_JHDH01000161.1 Protein Homology CDS 245 772 . - 0 ID=cds-WP_000907622.1;Parent=gene-AB11_RS22360;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AB11_RS22360;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 754 1338 . - . ID=gene-AB11_RS22365;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AB11_RS22365;old_locus_tag=AB11_4287 NZ_JHDH01000161.1 Protein Homology CDS 754 1338 . - 0 ID=cds-WP_001052169.1;Parent=gene-AB11_RS22365;Dbxref=GenBank:WP_001052169.1;Name=WP_001052169.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AB11_RS22365;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052169.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 1408 1677 . + . ID=gene-AB11_RS22370;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AB11_RS22370;old_locus_tag=AB11_4288 NZ_JHDH01000161.1 Protein Homology CDS 1408 1677 . + 0 ID=cds-WP_001295263.1;Parent=gene-AB11_RS22370;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AB11_RS22370;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 1754 2740 . + . ID=gene-AB11_RS22375;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AB11_RS22375;old_locus_tag=AB11_4289 NZ_JHDH01000161.1 Protein Homology CDS 1754 2740 . + 0 ID=cds-WP_001065516.1;Parent=gene-AB11_RS22375;Dbxref=GenBank:WP_001065516.1;Name=WP_001065516.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=AB11_RS22375;product=stress response kinase SrkA;protein_id=WP_001065516.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 2757 3383 . + . ID=gene-AB11_RS22380;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AB11_RS22380;old_locus_tag=AB11_4290 NZ_JHDH01000161.1 Protein Homology CDS 2757 3383 . + 0 ID=cds-WP_000725347.1;Parent=gene-AB11_RS22380;Dbxref=GenBank:WP_000725347.1;Name=WP_000725347.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AB11_RS22380;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725347.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 3538 4968 . + . ID=gene-AB11_RS22385;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=protein_coding;locus_tag=AB11_RS22385;old_locus_tag=AB11_4292 NZ_JHDH01000161.1 Protein Homology CDS 3538 4968 . + 0 ID=cds-WP_001351963.1;Parent=gene-AB11_RS22385;Dbxref=GenBank:WP_001351963.1;Name=WP_001351963.1;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312811.2;locus_tag=AB11_RS22385;product=YdgA family protein;protein_id=WP_001351963.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 5009 5941 . - . ID=gene-AB11_RS22390;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AB11_RS22390;old_locus_tag=AB11_4293 NZ_JHDH01000161.1 Protein Homology CDS 5009 5941 . - 0 ID=cds-WP_001313432.1;Parent=gene-AB11_RS22390;Dbxref=GenBank:WP_001313432.1;Name=WP_001313432.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AB11_RS22390;product=acyltransferase;protein_id=WP_001313432.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 6305 9091 . + . ID=gene-AB11_RS22395;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AB11_RS22395;old_locus_tag=AB11_4295 NZ_JHDH01000161.1 Protein Homology CDS 6305 9091 . + 0 ID=cds-WP_000250007.1;Parent=gene-AB11_RS22395;Dbxref=GenBank:WP_000250007.1;Name=WP_000250007.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312813.1;locus_tag=AB11_RS22395;product=DNA polymerase I;protein_id=WP_000250007.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 9257 9304 . + . ID=gene-AB11_RS26250;Name=AB11_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26250 NZ_JHDH01000161.1 Protein Homology CDS 9257 9304 . + 0 ID=cds-WP_071892919.1;Parent=gene-AB11_RS26250;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=AB11_RS26250;product=spot 42 RNA%2C inhibition of DNA synthesis;protein_id=WP_071892919.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 9473 10105 . - . ID=gene-AB11_RS22400;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AB11_RS22400;old_locus_tag=AB11_4297 NZ_JHDH01000161.1 Protein Homology CDS 9473 10105 . - 0 ID=cds-WP_000183349.1;Parent=gene-AB11_RS22400;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AB11_RS22400;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JHDH01000161.1 RefSeq pseudogene 10402 10568 . + . ID=gene-AB11_RS25635;Name=AB11_RS25635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25635;pseudo=true NZ_JHDH01000161.1 Protein Homology CDS 10402 10568 . + 0 ID=cds-AB11_RS25635;Parent=gene-AB11_RS25635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AB11_RS25635;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 10687 11193 . + . ID=gene-AB11_RS22405;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AB11_RS22405;old_locus_tag=AB11_4298 NZ_JHDH01000161.1 Protein Homology CDS 10687 11193 . + 0 ID=cds-WP_001351964.1;Parent=gene-AB11_RS22405;Dbxref=GenBank:WP_001351964.1;Name=WP_001351964.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312815.1;locus_tag=AB11_RS22405;product=Der GTPase-activating protein YihI;protein_id=WP_001351964.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 11382 12755 . + . ID=gene-AB11_RS22410;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AB11_RS22410;old_locus_tag=AB11_4300 NZ_JHDH01000161.1 Protein Homology CDS 11382 12755 . + 0 ID=cds-WP_000116090.1;Parent=gene-AB11_RS22410;Dbxref=GenBank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AB11_RS22410;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 12984 13094 . - . ID=gene-AB11_RS22415;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AB11_RS22415 NZ_JHDH01000161.1 Protein Homology CDS 12984 13094 . - 0 ID=cds-WP_000893994.1;Parent=gene-AB11_RS22415;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AB11_RS22415;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 13206 14615 . - . ID=gene-AB11_RS22420;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AB11_RS22420;old_locus_tag=AB11_4303 NZ_JHDH01000161.1 Protein Homology CDS 13206 14615 . - 0 ID=cds-WP_001188777.1;Parent=gene-AB11_RS22420;Dbxref=GenBank:WP_001188777.1;Name=WP_001188777.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AB11_RS22420;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 14627 15676 . - . ID=gene-AB11_RS22425;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AB11_RS22425;old_locus_tag=AB11_4304 NZ_JHDH01000161.1 Protein Homology CDS 14627 15676 . - 0 ID=cds-WP_000190577.1;Parent=gene-AB11_RS22425;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AB11_RS22425;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 15962 17371 . - . ID=gene-AB11_RS22430;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AB11_RS22430;old_locus_tag=AB11_4306 NZ_JHDH01000161.1 Protein Homology CDS 15962 17371 . - 0 ID=cds-WP_001271717.1;Parent=gene-AB11_RS22430;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AB11_RS22430;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 17744 19567 . + . ID=gene-AB11_RS22435;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AB11_RS22435;old_locus_tag=AB11_4307 NZ_JHDH01000161.1 Protein Homology CDS 17744 19567 . + 0 ID=cds-WP_000570668.1;Parent=gene-AB11_RS22435;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AB11_RS22435;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 19784 20494 . + . ID=gene-AB11_RS22440;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AB11_RS22440;old_locus_tag=AB11_4308 NZ_JHDH01000161.1 Protein Homology CDS 19784 20494 . + 0 ID=cds-WP_000829798.1;Parent=gene-AB11_RS22440;Dbxref=GenBank:WP_000829798.1;Name=WP_000829798.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AB11_RS22440;product=GntR family transcriptional regulator;protein_id=WP_000829798.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 20502 21482 . + . ID=gene-AB11_RS22445;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AB11_RS22445;old_locus_tag=AB11_4309 NZ_JHDH01000161.1 Protein Homology CDS 20502 21482 . + 0 ID=cds-WP_000988291.1;Parent=gene-AB11_RS22445;Dbxref=GenBank:WP_000988291.1;Name=WP_000988291.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AB11_RS22445;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000988291.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 21584 22849 . + . ID=gene-AB11_RS22450;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AB11_RS22450;old_locus_tag=AB11_4310 NZ_JHDH01000161.1 Protein Homology CDS 21584 22849 . + 0 ID=cds-WP_000956317.1;Parent=gene-AB11_RS22450;Dbxref=GenBank:WP_000956317.1;Name=WP_000956317.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312823.1;locus_tag=AB11_RS22450;product=MFS transporter;protein_id=WP_000956317.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 22940 23632 . - . ID=gene-AB11_RS22455;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AB11_RS22455;old_locus_tag=AB11_4311 NZ_JHDH01000161.1 Protein Homology CDS 22940 23632 . - 0 ID=cds-WP_024241682.1;Parent=gene-AB11_RS22455;Dbxref=GenBank:WP_024241682.1;Name=WP_024241682.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AB11_RS22455;product=porin OmpL;protein_id=WP_024241682.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 23699 25102 . - . ID=gene-AB11_RS22460;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;locus_tag=AB11_RS22460;old_locus_tag=AB11_4312 NZ_JHDH01000161.1 Protein Homology CDS 23699 25102 . - 0 ID=cds-WP_032224048.1;Parent=gene-AB11_RS22460;Dbxref=GenBank:WP_032224048.1;Name=WP_032224048.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihO;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312825.1;locus_tag=AB11_RS22460;product=MFS transporter;protein_id=WP_032224048.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 25142 26527 . - . ID=gene-AB11_RS22465;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;locus_tag=AB11_RS22465;old_locus_tag=AB11_4313 NZ_JHDH01000161.1 Protein Homology CDS 25142 26527 . - 0 ID=cds-WP_000018367.1;Parent=gene-AB11_RS22465;Dbxref=GenBank:WP_000018367.1;Name=WP_000018367.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312826.1;locus_tag=AB11_RS22465;product=MFS transporter;protein_id=WP_000018367.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 26573 28609 . - . ID=gene-AB11_RS22470;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AB11_RS22470;old_locus_tag=AB11_4314 NZ_JHDH01000161.1 Protein Homology CDS 26573 28609 . - 0 ID=cds-WP_000380867.1;Parent=gene-AB11_RS22470;Dbxref=GenBank:WP_000380867.1;Name=WP_000380867.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312827.1;locus_tag=AB11_RS22470;product=sulfoquinovosidase;protein_id=WP_000380867.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 28718 29593 . - . ID=gene-AB11_RS22475;Name=AB11_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS22475;old_locus_tag=AB11_4315 NZ_JHDH01000161.1 Protein Homology CDS 28718 29593 . - 0 ID=cds-WP_000345434.1;Parent=gene-AB11_RS22475;Dbxref=GenBank:WP_000345434.1;Name=WP_000345434.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=AB11_RS22475;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345434.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 29654 30556 . - . ID=gene-AB11_RS22480;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;locus_tag=AB11_RS22480;old_locus_tag=AB11_4316 NZ_JHDH01000161.1 Protein Homology CDS 29654 30556 . - 0 ID=cds-WP_032224050.1;Parent=gene-AB11_RS22480;Dbxref=GenBank:WP_032224050.1;Name=WP_032224050.1;gbkey=CDS;gene=yihR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417111.1;locus_tag=AB11_RS22480;product=aldose-1-epimerase;protein_id=WP_032224050.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 30625 31866 . - . ID=gene-AB11_RS22485;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AB11_RS22485;old_locus_tag=AB11_4317 NZ_JHDH01000161.1 Protein Homology CDS 30625 31866 . - 0 ID=cds-WP_000870913.1;Parent=gene-AB11_RS22485;Dbxref=GenBank:WP_000870913.1;Name=WP_000870913.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=AB11_RS22485;product=sulfoquinovose isomerase;protein_id=WP_000870913.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 31882 32760 . - . ID=gene-AB11_RS22490;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AB11_RS22490;old_locus_tag=AB11_4318 NZ_JHDH01000161.1 Protein Homology CDS 31882 32760 . - 0 ID=cds-WP_001046461.1;Parent=gene-AB11_RS22490;Dbxref=GenBank:WP_001046461.1;Name=WP_001046461.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312831.1;locus_tag=AB11_RS22490;product=sulfofructosephosphate aldolase;protein_id=WP_001046461.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 32784 33680 . - . ID=gene-AB11_RS22495;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AB11_RS22495;old_locus_tag=AB11_4319 NZ_JHDH01000161.1 Protein Homology CDS 32784 33680 . - 0 ID=cds-WP_000718901.1;Parent=gene-AB11_RS22495;Dbxref=GenBank:WP_000718901.1;Name=WP_000718901.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312832.1;locus_tag=AB11_RS22495;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718901.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 33848 34744 . + . ID=gene-AB11_RS22500;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AB11_RS22500;old_locus_tag=AB11_4320 NZ_JHDH01000161.1 Protein Homology CDS 33848 34744 . + 0 ID=cds-WP_000621647.1;Parent=gene-AB11_RS22500;Dbxref=GenBank:WP_000621647.1;Name=WP_000621647.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AB11_RS22500;product=sulfofructose kinase;protein_id=WP_000621647.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 34778 35563 . + . ID=gene-AB11_RS22505;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AB11_RS22505;old_locus_tag=AB11_4321 NZ_JHDH01000161.1 Protein Homology CDS 34778 35563 . + 0 ID=cds-WP_000059678.1;Parent=gene-AB11_RS22505;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AB11_RS22505;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 35662 36261 . + . ID=gene-AB11_RS22510;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AB11_RS22510;old_locus_tag=AB11_4322 NZ_JHDH01000161.1 Protein Homology CDS 35662 36261 . + 0 ID=cds-WP_001308174.1;Parent=gene-AB11_RS22510;Dbxref=GenBank:WP_001308174.1;Name=WP_001308174.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312835.2;locus_tag=AB11_RS22510;product=glucose-1-phosphatase;protein_id=WP_001308174.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 36255 37127 . + . ID=gene-AB11_RS22515;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AB11_RS22515;old_locus_tag=AB11_4323 NZ_JHDH01000161.1 Protein Homology CDS 36255 37127 . + 0 ID=cds-WP_000920762.1;Parent=gene-AB11_RS22515;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AB11_RS22515;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 37124 37561 . + . ID=gene-AB11_RS22520;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AB11_RS22520;old_locus_tag=AB11_4324 NZ_JHDH01000161.1 Protein Homology CDS 37124 37561 . + 0 ID=cds-WP_000560983.1;Parent=gene-AB11_RS22520;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AB11_RS22520;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 37606 38547 . + . ID=gene-AB11_RS22525;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AB11_RS22525;old_locus_tag=AB11_4325 NZ_JHDH01000161.1 Protein Homology CDS 37606 38547 . + 0 ID=cds-WP_001297068.1;Parent=gene-AB11_RS22525;Dbxref=GenBank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AB11_RS22525;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11 NZ_JHDH01000161.1 RefSeq pseudogene 38907 39023 . + . ID=gene-AB11_RS26115;Name=AB11_RS26115;end_range=39023,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26115;partial=true;pseudo=true NZ_JHDH01000161.1 Protein Homology CDS 38907 39023 . + 0 ID=cds-AB11_RS26115;Parent=gene-AB11_RS26115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=39023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AB11_RS26115;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 39400 39618 . + . ID=gene-AB11_RS22530;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AB11_RS22530;old_locus_tag=AB11_4326 NZ_JHDH01000161.1 Protein Homology CDS 39400 39618 . + 0 ID=cds-WP_001295676.1;Parent=gene-AB11_RS22530;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AB11_RS22530;product=ribbon-helix-helix domain-containing protein;protein_id=WP_001295676.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 39836 40078 . + . ID=gene-AB11_RS22535;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AB11_RS22535;old_locus_tag=AB11_4327 NZ_JHDH01000161.1 Protein Homology CDS 39836 40078 . + 0 ID=cds-WP_001086388.1;Parent=gene-AB11_RS22535;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AB11_RS22535;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JHDH01000161.1 RefSeq pseudogene 40411 41337 . - . ID=gene-AB11_RS22540;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=pseudogene;locus_tag=AB11_RS22540;old_locus_tag=AB11_4328;partial=true;pseudo=true;start_range=.,40411 NZ_JHDH01000161.1 Protein Homology CDS 40411 41337 . - 0 ID=cds-AB11_RS22540;Parent=gene-AB11_RS22540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AB11_RS22540;partial=true;product=formate dehydrogenase accessory protein FdhE;pseudo=true;start_range=.,40411;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 41334 41969 . - . ID=gene-AB11_RS22545;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AB11_RS22545;old_locus_tag=AB11_4329 NZ_JHDH01000161.1 Protein Homology CDS 41334 41969 . - 0 ID=cds-WP_000829013.1;Parent=gene-AB11_RS22545;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AB11_RS22545;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 41966 42868 . - . ID=gene-AB11_RS22550;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AB11_RS22550;old_locus_tag=AB11_4330 NZ_JHDH01000161.1 Protein Homology CDS 41966 42868 . - 0 ID=cds-WP_000331377.1;Parent=gene-AB11_RS22550;Dbxref=GenBank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AB11_RS22550;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 42881 45931 . - . ID=gene-AB11_RS22555;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB11_RS22555;old_locus_tag=AB11_4331 NZ_JHDH01000161.1 Protein Homology CDS 42881 45931 . - 0 ID=cds-WP_077249888.1;Parent=gene-AB11_RS22555;Dbxref=GenBank:WP_077249888.1;Name=WP_077249888.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AB11_RS22555;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077249888.1;transl_except=(pos:complement(45344..45346)%2Caa:Sec);transl_table=11 NZ_JHDH01000161.1 RefSeq gene 46125 46958 . + . ID=gene-AB11_RS22560;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AB11_RS22560;old_locus_tag=AB11_4334 NZ_JHDH01000161.1 Protein Homology CDS 46125 46958 . + 0 ID=cds-WP_000753617.1;Parent=gene-AB11_RS22560;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AB11_RS22560;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 47111 48166 . + . ID=gene-AB11_RS22565;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AB11_RS22565 NZ_JHDH01000161.1 Protein Homology CDS 47111 48166 . + 0 ID=cds-WP_001295677.1;Parent=gene-AB11_RS22565;Dbxref=GenBank:WP_001295677.1;Name=WP_001295677.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AB11_RS22565;product=YiiG family protein;protein_id=WP_001295677.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 48216 49964 . - . ID=gene-AB11_RS22570;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=AB11_RS22570;old_locus_tag=AB11_4336 NZ_JHDH01000161.1 Protein Homology CDS 48216 49964 . - 0 ID=cds-WP_021571007.1;Parent=gene-AB11_RS22570;Dbxref=GenBank:WP_021571007.1;Name=WP_021571007.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AB11_RS22570;product=putative frv operon regulatory protein;protein_id=WP_021571007.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 49964 51034 . - . ID=gene-AB11_RS22575;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AB11_RS22575;old_locus_tag=AB11_4337 NZ_JHDH01000161.1 Protein Homology CDS 49964 51034 . - 0 ID=cds-WP_001019484.1;Parent=gene-AB11_RS22575;Dbxref=GenBank:WP_001019484.1;Name=WP_001019484.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AB11_RS22575;product=aminopeptidase;protein_id=WP_001019484.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 51024 52475 . - . ID=gene-AB11_RS22580;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AB11_RS22580;old_locus_tag=AB11_4338 NZ_JHDH01000161.1 Protein Homology CDS 51024 52475 . - 0 ID=cds-WP_000446023.1;Parent=gene-AB11_RS22580;Dbxref=GenBank:WP_000446023.1;Name=WP_000446023.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AB11_RS22580;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446023.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 52486 52932 . - . ID=gene-AB11_RS22585;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AB11_RS22585;old_locus_tag=AB11_4339 NZ_JHDH01000161.1 Protein Homology CDS 52486 52932 . - 0 ID=cds-WP_000729595.1;Parent=gene-AB11_RS22585;Dbxref=GenBank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AB11_RS22585;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 53233 53547 . - . ID=gene-AB11_RS22590;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AB11_RS22590;old_locus_tag=AB11_4340 NZ_JHDH01000161.1 Protein Homology CDS 53233 53547 . - 0 ID=cds-WP_001414389.1;Parent=gene-AB11_RS22590;Dbxref=GenBank:WP_001414389.1;Name=WP_001414389.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AB11_RS22590;product=L-rhamnose mutarotase;protein_id=WP_001414389.1;transl_table=11 NZ_JHDH01000161.1 RefSeq gene 53557 54381 . - . ID=gene-AB11_RS22595;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AB11_RS22595;old_locus_tag=AB11_4341 NZ_JHDH01000161.1 Protein Homology CDS 53557 54381 . - 0 ID=cds-WP_001179745.1;Parent=gene-AB11_RS22595;Dbxref=GenBank:WP_001179745.1;Name=WP_001179745.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AB11_RS22595;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179745.1;transl_table=11 ##sequence-region NZ_JHDH01000162.1 1 73724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000162.1 RefSeq region 1 73724 . + . ID=NZ_JHDH01000162.1:1..73724;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000162.1 RefSeq gene 234 1493 . - . ID=gene-AB11_RS22600;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AB11_RS22600;old_locus_tag=AB11_4342 NZ_JHDH01000162.1 Protein Homology CDS 234 1493 . - 0 ID=cds-WP_001556342.1;Parent=gene-AB11_RS22600;Dbxref=GenBank:WP_001556342.1;Name=WP_001556342.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AB11_RS22600;product=L-rhamnose isomerase;protein_id=WP_001556342.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 1490 2959 . - . ID=gene-AB11_RS22605;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AB11_RS22605;old_locus_tag=AB11_4343 NZ_JHDH01000162.1 Protein Homology CDS 1490 2959 . - 0 ID=cds-WP_000144072.1;Parent=gene-AB11_RS22605;Dbxref=GenBank:WP_000144072.1;Name=WP_000144072.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=AB11_RS22605;product=rhamnulokinase;protein_id=WP_000144072.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 3247 4083 . + . ID=gene-AB11_RS22610;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AB11_RS22610;old_locus_tag=AB11_4345 NZ_JHDH01000162.1 Protein Homology CDS 3247 4083 . + 0 ID=cds-WP_000217139.1;Parent=gene-AB11_RS22610;Dbxref=GenBank:WP_000217139.1;Name=WP_000217139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AB11_RS22610;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217139.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 4157 5005 . + . ID=gene-AB11_RS22615;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AB11_RS22615;old_locus_tag=AB11_4346 NZ_JHDH01000162.1 Protein Homology CDS 4157 5005 . + 0 ID=cds-WP_001298410.1;Parent=gene-AB11_RS22615;Dbxref=GenBank:WP_001298410.1;Name=WP_001298410.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AB11_RS22615;product=HTH-type transcriptional activator RhaR;protein_id=WP_001298410.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 5002 6036 . - . ID=gene-AB11_RS22620;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AB11_RS22620;old_locus_tag=AB11_4347 NZ_JHDH01000162.1 Protein Homology CDS 5002 6036 . - 0 ID=cds-WP_000063495.1;Parent=gene-AB11_RS22620;Dbxref=GenBank:WP_000063495.1;Name=WP_000063495.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AB11_RS22620;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063495.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 6321 6941 . + . ID=gene-AB11_RS22625;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AB11_RS22625;old_locus_tag=AB11_4348 NZ_JHDH01000162.1 Protein Homology CDS 6321 6941 . + 0 ID=cds-WP_001390853.1;Parent=gene-AB11_RS22625;Dbxref=GenBank:WP_001390853.1;Name=WP_001390853.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AB11_RS22625;product=superoxide dismutase [Mn];protein_id=WP_001390853.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 7201 8184 . + . ID=gene-AB11_RS22630;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AB11_RS22630;old_locus_tag=AB11_4350 NZ_JHDH01000162.1 Protein Homology CDS 7201 8184 . + 0 ID=cds-WP_001411955.1;Parent=gene-AB11_RS22630;Dbxref=GenBank:WP_001411955.1;Name=WP_001411955.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AB11_RS22630;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001411955.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 8333 9007 . + . ID=gene-AB11_RS22635;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AB11_RS22635;old_locus_tag=AB11_4351 NZ_JHDH01000162.1 Protein Homology CDS 8333 9007 . + 0 ID=cds-WP_001514703.1;Parent=gene-AB11_RS22635;Dbxref=GenBank:WP_001514703.1;Name=WP_001514703.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AB11_RS22635;product=6-hydroxyaminopurine reductase;protein_id=WP_001514703.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 9113 10486 . - . ID=gene-AB11_RS22640;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AB11_RS22640;old_locus_tag=AB11_4352 NZ_JHDH01000162.1 Protein Homology CDS 9113 10486 . - 0 ID=cds-WP_032224054.1;Parent=gene-AB11_RS22640;Dbxref=GenBank:WP_032224054.1;Name=WP_032224054.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AB11_RS22640;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_032224054.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 10483 11181 . - . ID=gene-AB11_RS22645;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AB11_RS22645;old_locus_tag=AB11_4353 NZ_JHDH01000162.1 Protein Homology CDS 10483 11181 . - 0 ID=cds-WP_001033722.1;Parent=gene-AB11_RS22645;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AB11_RS22645;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 11331 11831 . + . ID=gene-AB11_RS22650;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AB11_RS22650;old_locus_tag=AB11_4354 NZ_JHDH01000162.1 Protein Homology CDS 11331 11831 . + 0 ID=cds-WP_001223800.1;Parent=gene-AB11_RS22650;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AB11_RS22650;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 11980 12882 . + . ID=gene-AB11_RS22655;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AB11_RS22655;old_locus_tag=AB11_4355 NZ_JHDH01000162.1 Protein Homology CDS 11980 12882 . + 0 ID=cds-WP_001076742.1;Parent=gene-AB11_RS22655;Dbxref=GenBank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AB11_RS22655;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 13063 14025 . + . ID=gene-AB11_RS22660;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AB11_RS22660;old_locus_tag=AB11_4356 NZ_JHDH01000162.1 Protein Homology CDS 13063 14025 . + 0 ID=cds-WP_000591795.1;Parent=gene-AB11_RS22660;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AB11_RS22660;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 14344 15333 . + . ID=gene-AB11_RS22665;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AB11_RS22665;old_locus_tag=AB11_4357 NZ_JHDH01000162.1 Protein Homology CDS 14344 15333 . + 0 ID=cds-WP_001045689.1;Parent=gene-AB11_RS22665;Dbxref=GenBank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AB11_RS22665;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 15440 16195 . + . ID=gene-AB11_RS22670;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AB11_RS22670;old_locus_tag=AB11_4358 NZ_JHDH01000162.1 Protein Homology CDS 15440 16195 . + 0 ID=cds-WP_001514749.1;Parent=gene-AB11_RS22670;Dbxref=GenBank:WP_001514749.1;Name=WP_001514749.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AB11_RS22670;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001514749.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 16250 17017 . - . ID=gene-AB11_RS22675;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AB11_RS22675;old_locus_tag=AB11_4359 NZ_JHDH01000162.1 Protein Homology CDS 16250 17017 . - 0 ID=cds-WP_001216325.1;Parent=gene-AB11_RS22675;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AB11_RS22675;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 17125 17724 . - . ID=gene-AB11_RS22680;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AB11_RS22680;old_locus_tag=AB11_4360 NZ_JHDH01000162.1 Protein Homology CDS 17125 17724 . - 0 ID=cds-WP_000802226.1;Parent=gene-AB11_RS22680;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AB11_RS22680;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 17825 18265 . + . ID=gene-AB11_RS22685;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AB11_RS22685;old_locus_tag=AB11_4361 NZ_JHDH01000162.1 Protein Homology CDS 17825 18265 . + 0 ID=cds-WP_021571008.1;Parent=gene-AB11_RS22685;Dbxref=GenBank:WP_021571008.1;Name=WP_021571008.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AB11_RS22685;product=DUF805 domain-containing protein;protein_id=WP_021571008.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 18477 18776 . + . ID=gene-AB11_RS22690;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AB11_RS22690;old_locus_tag=AB11_4362 NZ_JHDH01000162.1 Protein Homology CDS 18477 18776 . + 0 ID=cds-WP_000655989.1;Parent=gene-AB11_RS22690;Dbxref=GenBank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418357.1;locus_tag=AB11_RS22690;product=DUF406 domain-containing protein;protein_id=WP_000655989.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 18803 19231 . + . ID=gene-AB11_RS22695;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AB11_RS22695;old_locus_tag=AB11_4363 NZ_JHDH01000162.1 Protein Homology CDS 18803 19231 . + 0 ID=cds-WP_000323556.1;Parent=gene-AB11_RS22695;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AB11_RS22695;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 19236 19982 . - . ID=gene-AB11_RS22700;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AB11_RS22700;old_locus_tag=AB11_4364 NZ_JHDH01000162.1 Protein Homology CDS 19236 19982 . - 0 ID=cds-WP_000796332.1;Parent=gene-AB11_RS22700;Dbxref=GenBank:WP_000796332.1;Name=WP_000796332.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418359.1;locus_tag=AB11_RS22700;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 20079 21089 . - . ID=gene-AB11_RS22705;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB11_RS22705;old_locus_tag=AB11_4365 NZ_JHDH01000162.1 Protein Homology CDS 20079 21089 . - 0 ID=cds-WP_001250644.1;Parent=gene-AB11_RS22705;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AB11_RS22705;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 21224 22732 . - . ID=gene-AB11_RS22710;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AB11_RS22710;old_locus_tag=AB11_4366 NZ_JHDH01000162.1 Protein Homology CDS 21224 22732 . - 0 ID=cds-WP_000136788.1;Parent=gene-AB11_RS22710;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AB11_RS22710;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 22755 23600 . - . ID=gene-AB11_RS22715;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AB11_RS22715;old_locus_tag=AB11_4367 NZ_JHDH01000162.1 Protein Homology CDS 22755 23600 . - 0 ID=cds-WP_000084268.1;Parent=gene-AB11_RS22715;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AB11_RS22715;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 24025 24270 . + . ID=gene-AB11_RS22720;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AB11_RS22720;old_locus_tag=AB11_4368 NZ_JHDH01000162.1 Protein Homology CDS 24025 24270 . + 0 ID=cds-WP_001296623.1;Parent=gene-AB11_RS22720;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AB11_RS22720;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 24355 24840 . - . ID=gene-AB11_RS22725;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AB11_RS22725;old_locus_tag=AB11_4369 NZ_JHDH01000162.1 Protein Homology CDS 24355 24840 . - 0 ID=cds-WP_000872908.1;Parent=gene-AB11_RS22725;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AB11_RS22725;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 24933 25859 . - . ID=gene-AB11_RS22730;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AB11_RS22730;old_locus_tag=AB11_4370 NZ_JHDH01000162.1 Protein Homology CDS 24933 25859 . - 0 ID=cds-WP_000139496.1;Parent=gene-AB11_RS22730;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AB11_RS22730;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 25926 27257 . - . ID=gene-AB11_RS22735;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AB11_RS22735;old_locus_tag=AB11_4371 NZ_JHDH01000162.1 Protein Homology CDS 25926 27257 . - 0 ID=cds-WP_001293341.1;Parent=gene-AB11_RS22735;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AB11_RS22735;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 27267 27797 . - . ID=gene-AB11_RS22740;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AB11_RS22740;old_locus_tag=AB11_4372 NZ_JHDH01000162.1 Protein Homology CDS 27267 27797 . - 0 ID=cds-WP_000208242.1;Parent=gene-AB11_RS22740;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AB11_RS22740;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 27890 28849 . - . ID=gene-AB11_RS22745;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AB11_RS22745;old_locus_tag=AB11_4373 NZ_JHDH01000162.1 Protein Homology CDS 27890 28849 . - 0 ID=cds-WP_000068828.1;Parent=gene-AB11_RS22745;Dbxref=GenBank:WP_000068828.1;Name=WP_000068828.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AB11_RS22745;product=cell division protein FtsN;protein_id=WP_000068828.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 28941 29966 . - . ID=gene-AB11_RS22750;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AB11_RS22750;old_locus_tag=AB11_4374 NZ_JHDH01000162.1 Protein Homology CDS 28941 29966 . - 0 ID=cds-WP_032224056.1;Parent=gene-AB11_RS22750;Dbxref=GenBank:WP_032224056.1;Name=WP_032224056.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AB11_RS22750;product=DNA-binding transcriptional regulator CytR;protein_id=WP_032224056.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 30122 32320 . - . ID=gene-AB11_RS22755;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AB11_RS22755;old_locus_tag=AB11_4376 NZ_JHDH01000162.1 Protein Homology CDS 30122 32320 . - 0 ID=cds-WP_032224058.1;Parent=gene-AB11_RS22755;Dbxref=GenBank:WP_032224058.1;Name=WP_032224058.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AB11_RS22755;product=primosomal protein N';protein_id=WP_032224058.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 32523 32735 . + . ID=gene-AB11_RS22760;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AB11_RS22760;old_locus_tag=AB11_4377 NZ_JHDH01000162.1 Protein Homology CDS 32523 32735 . + 0 ID=cds-WP_000710769.1;Parent=gene-AB11_RS22760;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AB11_RS22760;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 32796 33404 . - . ID=gene-AB11_RS22765;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AB11_RS22765;old_locus_tag=AB11_4378 NZ_JHDH01000162.1 Protein Homology CDS 32796 33404 . - 0 ID=cds-WP_000797353.1;Parent=gene-AB11_RS22765;Dbxref=GenBank:WP_000797353.1;Name=WP_000797353.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418372.1;locus_tag=AB11_RS22765;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797353.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 33588 33905 . - . ID=gene-AB11_RS22770;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AB11_RS22770;old_locus_tag=AB11_4379 NZ_JHDH01000162.1 Protein Homology CDS 33588 33905 . - 0 ID=cds-WP_000852812.1;Parent=gene-AB11_RS22770;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AB11_RS22770;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 34182 35342 . + . ID=gene-AB11_RS22775;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AB11_RS22775;old_locus_tag=AB11_4380 NZ_JHDH01000162.1 Protein Homology CDS 34182 35342 . + 0 ID=cds-WP_001295694.1;Parent=gene-AB11_RS22775;Dbxref=GenBank:WP_001295694.1;Name=WP_001295694.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AB11_RS22775;product=cystathionine gamma-synthase;protein_id=WP_001295694.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 35345 37777 . + . ID=gene-AB11_RS22780;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AB11_RS22780;old_locus_tag=AB11_4381 NZ_JHDH01000162.1 Protein Homology CDS 35345 37777 . + 0 ID=cds-WP_000110772.1;Parent=gene-AB11_RS22780;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AB11_RS22780;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 37916 38050 . - . ID=gene-AB11_RS25870;Name=AB11_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25870;old_locus_tag=AB11_4382 NZ_JHDH01000162.1 GeneMarkS-2+ CDS 37916 38050 . - 0 ID=cds-WP_000660586.1;Parent=gene-AB11_RS25870;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS25870;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 38126 39016 . + . ID=gene-AB11_RS22785;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AB11_RS22785;old_locus_tag=AB11_4383 NZ_JHDH01000162.1 Protein Homology CDS 38126 39016 . + 0 ID=cds-WP_000007523.1;Parent=gene-AB11_RS22785;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AB11_RS22785;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 39345 41525 . + . ID=gene-AB11_RS22790;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AB11_RS22790;old_locus_tag=AB11_4384 NZ_JHDH01000162.1 Protein Homology CDS 39345 41525 . + 0 ID=cds-WP_001295695.1;Parent=gene-AB11_RS22790;Dbxref=GenBank:WP_001295695.1;Name=WP_001295695.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=AB11_RS22790;product=catalase/peroxidase HPI;protein_id=WP_001295695.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 41618 42523 . + . ID=gene-AB11_RS22795;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AB11_RS22795;old_locus_tag=AB11_4385 NZ_JHDH01000162.1 Protein Homology CDS 41618 42523 . + 0 ID=cds-WP_001271242.1;Parent=gene-AB11_RS22795;Dbxref=GenBank:WP_001271242.1;Name=WP_001271242.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AB11_RS22795;product=cystine transporter YijE;protein_id=WP_001271242.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 42550 43167 . - . ID=gene-AB11_RS22800;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AB11_RS22800;old_locus_tag=AB11_4386 NZ_JHDH01000162.1 Protein Homology CDS 42550 43167 . - 0 ID=cds-WP_000647891.1;Parent=gene-AB11_RS22800;Dbxref=GenBank:WP_000647891.1;Name=WP_000647891.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AB11_RS22800;product=DUF1287 domain-containing protein;protein_id=WP_000647891.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 43442 44545 . - . ID=gene-AB11_RS22805;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AB11_RS22805;old_locus_tag=AB11_4387 NZ_JHDH01000162.1 Protein Homology CDS 43442 44545 . - 0 ID=cds-WP_000374004.1;Parent=gene-AB11_RS22805;Dbxref=GenBank:WP_000374004.1;Name=WP_000374004.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AB11_RS22805;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 44556 45218 . - . ID=gene-AB11_RS22810;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB11_RS22810;old_locus_tag=AB11_4388 NZ_JHDH01000162.1 Protein Homology CDS 44556 45218 . - 0 ID=cds-WP_000424840.1;Parent=gene-AB11_RS22810;Dbxref=GenBank:WP_000424840.1;Name=WP_000424840.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AB11_RS22810;product=fructose-6-phosphate aldolase;protein_id=WP_000424840.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 45230 47731 . - . ID=gene-AB11_RS22815;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB11_RS22815;old_locus_tag=AB11_4389 NZ_JHDH01000162.1 Protein Homology CDS 45230 47731 . - 0 ID=cds-WP_001174077.1;Parent=gene-AB11_RS22815;Dbxref=GenBank:WP_001174077.1;Name=WP_001174077.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AB11_RS22815;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001174077.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 48040 49119 . + . ID=gene-AB11_RS22820;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AB11_RS22820;old_locus_tag=AB11_4390 NZ_JHDH01000162.1 Protein Homology CDS 48040 49119 . + 0 ID=cds-WP_001004446.1;Parent=gene-AB11_RS22820;Dbxref=GenBank:WP_001004446.1;Name=WP_001004446.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AB11_RS22820;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004446.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 49134 49454 . + . ID=gene-AB11_RS22825;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AB11_RS22825;old_locus_tag=AB11_4391 NZ_JHDH01000162.1 Protein Homology CDS 49134 49454 . + 0 ID=cds-WP_000161265.1;Parent=gene-AB11_RS22825;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AB11_RS22825;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 49505 51802 . + . ID=gene-AB11_RS22830;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AB11_RS22830;old_locus_tag=AB11_4392 NZ_JHDH01000162.1 Protein Homology CDS 49505 51802 . + 0 ID=cds-WP_032224061.1;Parent=gene-AB11_RS22830;Dbxref=GenBank:WP_032224061.1;Name=WP_032224061.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AB11_RS22830;product=formate C-acetyltransferase;protein_id=WP_032224061.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 51768 52646 . + . ID=gene-AB11_RS22835;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AB11_RS22835;old_locus_tag=AB11_4393 NZ_JHDH01000162.1 Protein Homology CDS 51768 52646 . + 0 ID=cds-WP_000204144.1;Parent=gene-AB11_RS22835;Dbxref=GenBank:WP_000204144.1;Name=WP_000204144.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418387.3;locus_tag=AB11_RS22835;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204144.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 52648 52989 . + . ID=gene-AB11_RS22840;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AB11_RS22840;old_locus_tag=AB11_4394 NZ_JHDH01000162.1 Protein Homology CDS 52648 52989 . + 0 ID=cds-WP_001406376.1;Parent=gene-AB11_RS22840;Dbxref=GenBank:WP_001406376.1;Name=WP_001406376.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AB11_RS22840;product=PTS fructose-like transporter subunit IIB;protein_id=WP_001406376.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 52976 53827 . - . ID=gene-AB11_RS22845;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AB11_RS22845;old_locus_tag=AB11_4395 NZ_JHDH01000162.1 Protein Homology CDS 52976 53827 . - 0 ID=cds-WP_000274636.1;Parent=gene-AB11_RS22845;Dbxref=GenBank:WP_000274636.1;Name=WP_000274636.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=AB11_RS22845;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 54042 55775 . - . ID=gene-AB11_RS22850;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AB11_RS22850;old_locus_tag=AB11_4396 NZ_JHDH01000162.1 Protein Homology CDS 54042 55775 . - 0 ID=cds-WP_000556306.1;Parent=gene-AB11_RS22850;Dbxref=GenBank:WP_000556306.1;Name=WP_000556306.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AB11_RS22850;product=phosphoethanolamine transferase CptA;protein_id=WP_000556306.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 55957 58608 . - . ID=gene-AB11_RS22855;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AB11_RS22855;old_locus_tag=AB11_4397 NZ_JHDH01000162.1 Protein Homology CDS 55957 58608 . - 0 ID=cds-WP_001005586.1;Parent=gene-AB11_RS22855;Dbxref=GenBank:WP_001005586.1;Name=WP_001005586.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB11_RS22855;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005586.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 59452 60603 . - . ID=gene-AB11_RS22860;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AB11_RS22860;old_locus_tag=AB11_4398 NZ_JHDH01000162.1 Protein Homology CDS 59452 60603 . - 0 ID=cds-WP_001298964.1;Parent=gene-AB11_RS22860;Dbxref=GenBank:WP_001298964.1;Name=WP_001298964.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AB11_RS22860;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 60757 61761 . + . ID=gene-AB11_RS22865;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AB11_RS22865;old_locus_tag=AB11_4399 NZ_JHDH01000162.1 Protein Homology CDS 60757 61761 . + 0 ID=cds-WP_021571012.1;Parent=gene-AB11_RS22865;Dbxref=GenBank:WP_021571012.1;Name=WP_021571012.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AB11_RS22865;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_021571012.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 61769 62545 . + . ID=gene-AB11_RS22870;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AB11_RS22870;old_locus_tag=AB11_4400 NZ_JHDH01000162.1 Protein Homology CDS 61769 62545 . + 0 ID=cds-WP_001302318.1;Parent=gene-AB11_RS22870;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AB11_RS22870;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 62606 63979 . + . ID=gene-AB11_RS22875;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AB11_RS22875;old_locus_tag=AB11_4401 NZ_JHDH01000162.1 Protein Homology CDS 62606 63979 . + 0 ID=cds-WP_001230087.1;Parent=gene-AB11_RS22875;Dbxref=GenBank:WP_001230087.1;Name=WP_001230087.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AB11_RS22875;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 64246 65163 . + . ID=gene-AB11_RS22880;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AB11_RS22880;old_locus_tag=AB11_4402 NZ_JHDH01000162.1 Protein Homology CDS 64246 65163 . + 0 ID=cds-WP_001025939.1;Parent=gene-AB11_RS22880;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AB11_RS22880;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 65146 66546 . - . ID=gene-AB11_RS22885;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AB11_RS22885;old_locus_tag=AB11_4403 NZ_JHDH01000162.1 Protein Homology CDS 65146 66546 . - 0 ID=cds-WP_001120810.1;Parent=gene-AB11_RS22885;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AB11_RS22885;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 66877 67527 . + . ID=gene-AB11_RS22890;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AB11_RS22890;old_locus_tag=AB11_4405 NZ_JHDH01000162.1 Protein Homology CDS 66877 67527 . + 0 ID=cds-WP_001309117.1;Parent=gene-AB11_RS22890;Dbxref=GenBank:WP_001309117.1;Name=WP_001309117.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AB11_RS22890;product=HTH-type transcriptional repressor FabR;protein_id=WP_001309117.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 67527 67886 . + . ID=gene-AB11_RS22895;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AB11_RS22895;old_locus_tag=AB11_4406 NZ_JHDH01000162.1 Protein Homology CDS 67527 67886 . + 0 ID=cds-WP_000806411.1;Parent=gene-AB11_RS22895;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AB11_RS22895;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 67926 69026 . - . ID=gene-AB11_RS22900;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AB11_RS22900;old_locus_tag=AB11_4407 NZ_JHDH01000162.1 Protein Homology CDS 67926 69026 . - 0 ID=cds-WP_000187022.1;Parent=gene-AB11_RS22900;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AB11_RS22900;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JHDH01000162.1 cmsearch riboswitch 69140 69329 . + . ID=id-NZ_JHDH01000162.1:69140..69329;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000162.1 RefSeq gene 69395 71239 . + . ID=gene-AB11_RS22905;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AB11_RS22905;old_locus_tag=AB11_4408 NZ_JHDH01000162.1 Protein Homology CDS 69395 71239 . + 0 ID=cds-WP_032224063.1;Parent=gene-AB11_RS22905;Dbxref=GenBank:WP_032224063.1;Name=WP_032224063.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AB11_RS22905;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_032224063.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 71184 72041 . + . ID=gene-AB11_RS22910;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AB11_RS22910;old_locus_tag=AB11_4409 NZ_JHDH01000162.1 Protein Homology CDS 71184 72041 . + 0 ID=cds-WP_000201820.1;Parent=gene-AB11_RS22910;Dbxref=GenBank:WP_000201820.1;Name=WP_000201820.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418402.2;locus_tag=AB11_RS22910;product=glutamate racemase;protein_id=WP_000201820.1;transl_table=11 NZ_JHDH01000162.1 RefSeq gene 72415 73724 . + . ID=gene-AB11_RS22915;Name=AB11_RS22915;end_range=73724,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22915;old_locus_tag=AB11_4410;partial=true NZ_JHDH01000162.1 cmsearch rRNA 72415 73724 . + . ID=rna-AB11_RS22915;Parent=gene-AB11_RS22915;Dbxref=RFAM:RF00177;end_range=73724,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22915;partial=true;product=16S ribosomal RNA NZ_JHDH01000162.1 cmsearch exon 72415 73724 . + . ID=exon-AB11_RS22915-1;Parent=rna-AB11_RS22915;Dbxref=RFAM:RF00177;end_range=73724,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22915;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000163.1 1 10239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000163.1 RefSeq region 1 10239 . + . ID=NZ_JHDH01000163.1:1..10239;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000163.1 RefSeq gene 25 726 . + . ID=gene-AB11_RS22920;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AB11_RS22920;old_locus_tag=AB11_4411 NZ_JHDH01000163.1 Protein Homology CDS 25 726 . + 0 ID=cds-WP_000209826.1-2;Parent=gene-AB11_RS22920;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AB11_RS22920;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 1009 2172 . - . ID=gene-AB11_RS22925;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AB11_RS22925;old_locus_tag=AB11_4412 NZ_JHDH01000163.1 Protein Homology CDS 1009 2172 . - 0 ID=cds-WP_000438725.1;Parent=gene-AB11_RS22925;Dbxref=GenBank:WP_000438725.1;Name=WP_000438725.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AB11_RS22925;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 2182 4371 . - . ID=gene-AB11_RS22930;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AB11_RS22930;old_locus_tag=AB11_4413 NZ_JHDH01000163.1 Protein Homology CDS 2182 4371 . - 0 ID=cds-WP_000965926.1;Parent=gene-AB11_RS22930;Dbxref=GenBank:WP_000965926.1;Name=WP_000965926.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AB11_RS22930;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965926.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 4561 5892 . + . ID=gene-AB11_RS22935;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AB11_RS22935;old_locus_tag=AB11_4414 NZ_JHDH01000163.1 Protein Homology CDS 4561 5892 . + 0 ID=cds-WP_000444561.1;Parent=gene-AB11_RS22935;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AB11_RS22935;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 5892 6506 . + . ID=gene-AB11_RS22940;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AB11_RS22940;old_locus_tag=AB11_4415 NZ_JHDH01000163.1 Protein Homology CDS 5892 6506 . + 0 ID=cds-WP_001296979.1;Parent=gene-AB11_RS22940;Dbxref=GenBank:WP_001296979.1;Name=WP_001296979.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709652.2;locus_tag=AB11_RS22940;product=IMPACT family protein;protein_id=WP_001296979.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 6545 7996 . + . ID=gene-AB11_RS22945;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AB11_RS22945;old_locus_tag=AB11_4416 NZ_JHDH01000163.1 Protein Homology CDS 6545 7996 . + 0 ID=cds-WP_000545677.1;Parent=gene-AB11_RS22945;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AB11_RS22945;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 8008 8553 . + . ID=gene-AB11_RS22950;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AB11_RS22950;old_locus_tag=AB11_4417 NZ_JHDH01000163.1 Protein Homology CDS 8008 8553 . + 0 ID=cds-WP_000853970.1;Parent=gene-AB11_RS22950;Dbxref=GenBank:WP_000853970.1;Name=WP_000853970.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AB11_RS22950;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853970.1;transl_table=11 NZ_JHDH01000163.1 RefSeq gene 8930 10239 . + . ID=gene-AB11_RS22955;Name=AB11_RS22955;end_range=10239,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22955;old_locus_tag=AB11_4418;partial=true NZ_JHDH01000163.1 cmsearch rRNA 8930 10239 . + . ID=rna-AB11_RS22955;Parent=gene-AB11_RS22955;Dbxref=RFAM:RF00177;end_range=10239,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22955;partial=true;product=16S ribosomal RNA NZ_JHDH01000163.1 cmsearch exon 8930 10239 . + . ID=exon-AB11_RS22955-1;Parent=rna-AB11_RS22955;Dbxref=RFAM:RF00177;end_range=10239,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22955;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDH01000164.1 1 3402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000164.1 RefSeq region 1 3402 . + . ID=NZ_JHDH01000164.1:1..3402;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000164.1 RefSeq gene 1 193 . + . ID=gene-AB11_RS22960;Name=AB11_RS22960;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22960;partial=true;start_range=.,1 NZ_JHDH01000164.1 cmsearch rRNA 1 193 . + . ID=rna-AB11_RS22960;Parent=gene-AB11_RS22960;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22960;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000164.1 cmsearch exon 1 193 . + . ID=exon-AB11_RS22960-1;Parent=rna-AB11_RS22960;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22960;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDH01000164.1 RefSeq gene 365 440 . + . ID=gene-AB11_RS22965;Name=AB11_RS22965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS22965;old_locus_tag=AB11_4419 NZ_JHDH01000164.1 tRNAscan-SE tRNA 365 440 . + . ID=rna-AB11_RS22965;Parent=gene-AB11_RS22965;anticodon=(pos:399..401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22965;product=tRNA-Glu NZ_JHDH01000164.1 tRNAscan-SE exon 365 440 . + . ID=exon-AB11_RS22965-1;Parent=rna-AB11_RS22965;anticodon=(pos:399..401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS22965;product=tRNA-Glu NZ_JHDH01000164.1 RefSeq gene 634 3402 . + . ID=gene-AB11_RS22970;Name=AB11_RS22970;end_range=3402,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22970;old_locus_tag=AB11_4420;partial=true NZ_JHDH01000164.1 cmsearch rRNA 634 3402 . + . ID=rna-AB11_RS22970;Parent=gene-AB11_RS22970;Dbxref=RFAM:RF02541;end_range=3402,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22970;partial=true;product=23S ribosomal RNA NZ_JHDH01000164.1 cmsearch exon 634 3402 . + . ID=exon-AB11_RS22970-1;Parent=rna-AB11_RS22970;Dbxref=RFAM:RF02541;end_range=3402,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22970;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDH01000165.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000165.1 RefSeq region 1 2047 . + . ID=NZ_JHDH01000165.1:1..2047;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000165.1 RefSeq gene 177 1205 . + . ID=gene-AB11_RS22975;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AB11_RS22975;old_locus_tag=AB11_4422 NZ_JHDH01000165.1 Protein Homology CDS 177 1205 . + 0 ID=cds-WP_001016699.1-2;Parent=gene-AB11_RS22975;Dbxref=GenBank:WP_001016699.1;Name=WP_001016699.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418403.1;locus_tag=AB11_RS22975;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016699.1;transl_table=11 NZ_JHDH01000165.1 RefSeq gene 1202 2047 . + . ID=gene-AB11_RS22980;Name=birA;end_range=2047,.;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AB11_RS22980;old_locus_tag=AB11_4423;partial=true NZ_JHDH01000165.1 Protein Homology CDS 1202 2047 . + 0 ID=cds-WP_032224076.1;Parent=gene-AB11_RS22980;Dbxref=GenBank:WP_032224076.1;Name=WP_032224076.1;Ontology_term=GO:0036211,GO:0004077;end_range=2047,.;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418404.1;locus_tag=AB11_RS22980;partial=true;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_032224076.1;transl_table=11 ##sequence-region NZ_JHDH01000166.1 1 8432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000166.1 RefSeq region 1 8432 . + . ID=NZ_JHDH01000166.1:1..8432;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000166.1 RefSeq gene 17 2919 . + . ID=gene-AB11_RS22985;Name=AB11_RS22985;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB11_RS22985;old_locus_tag=AB11_4424 NZ_JHDH01000166.1 cmsearch rRNA 17 2919 . + . ID=rna-AB11_RS22985;Parent=gene-AB11_RS22985;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22985;product=23S ribosomal RNA NZ_JHDH01000166.1 cmsearch exon 17 2919 . + . ID=exon-AB11_RS22985-1;Parent=rna-AB11_RS22985;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22985;product=23S ribosomal RNA NZ_JHDH01000166.1 RefSeq gene 3014 3129 . + . ID=gene-AB11_RS22990;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB11_RS22990;old_locus_tag=AB11_4426 NZ_JHDH01000166.1 cmsearch rRNA 3014 3129 . + . ID=rna-AB11_RS22990;Parent=gene-AB11_RS22990;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22990;product=5S ribosomal RNA NZ_JHDH01000166.1 cmsearch exon 3014 3129 . + . ID=exon-AB11_RS22990-1;Parent=rna-AB11_RS22990;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB11_RS22990;product=5S ribosomal RNA NZ_JHDH01000166.1 RefSeq gene 3206 3589 . + . ID=gene-AB11_RS22995;Name=AB11_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS22995;old_locus_tag=AB11_4427 NZ_JHDH01000166.1 Protein Homology CDS 3206 3589 . + 0 ID=cds-WP_001326558.1;Parent=gene-AB11_RS22995;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AB11_RS22995;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11 NZ_JHDH01000166.1 RefSeq gene 3652 4095 . - . ID=gene-AB11_RS23000;Name=AB11_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23000 NZ_JHDH01000166.1 Protein Homology CDS 3652 4095 . - 0 ID=cds-WP_000237004.1;Parent=gene-AB11_RS23000;Dbxref=GenBank:WP_000237004.1;Name=WP_000237004.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AB11_RS23000;product=acetyltransferase;protein_id=WP_000237004.1;transl_table=11 NZ_JHDH01000166.1 RefSeq gene 4252 5181 . + . ID=gene-AB11_RS23005;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AB11_RS23005;old_locus_tag=AB11_4429 NZ_JHDH01000166.1 Protein Homology CDS 4252 5181 . + 0 ID=cds-WP_001122777.1;Parent=gene-AB11_RS23005;Dbxref=GenBank:WP_001122777.1;Name=WP_001122777.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AB11_RS23005;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122777.1;transl_table=11 NZ_JHDH01000166.1 RefSeq gene 5450 7051 . + . ID=gene-AB11_RS23010;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AB11_RS23010;old_locus_tag=AB11_4430 NZ_JHDH01000166.1 Protein Homology CDS 5450 7051 . + 0 ID=cds-WP_000138905.1;Parent=gene-AB11_RS23010;Dbxref=GenBank:WP_000138905.1;Name=WP_000138905.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AB11_RS23010;product=malate synthase A;protein_id=WP_000138905.1;transl_table=11 NZ_JHDH01000166.1 RefSeq gene 7081 8385 . + . ID=gene-AB11_RS23015;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AB11_RS23015;old_locus_tag=AB11_4431 NZ_JHDH01000166.1 Protein Homology CDS 7081 8385 . + 0 ID=cds-WP_000857856.1;Parent=gene-AB11_RS23015;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB11_RS23015;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 ##sequence-region NZ_JHDH01000167.1 1 26449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000167.1 RefSeq region 1 26449 . + . ID=NZ_JHDH01000167.1:1..26449;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000167.1 RefSeq gene 1 1053 . + . ID=gene-AB11_RS23020;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AB11_RS23020;old_locus_tag=AB11_4432;partial=true;start_range=.,1 NZ_JHDH01000167.1 Protein Homology CDS 1 1053 . + 0 ID=cds-WP_032213636.1-2;Parent=gene-AB11_RS23020;Dbxref=GenBank:WP_032213636.1;Name=WP_032213636.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB11_RS23020;partial=true;product=isocitrate lyase;protein_id=WP_032213636.1;start_range=.,1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 1530 3266 . + . ID=gene-AB11_RS23025;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AB11_RS23025;old_locus_tag=AB11_4433 NZ_JHDH01000167.1 Protein Homology CDS 1530 3266 . + 0 ID=cds-WP_001137220.1;Parent=gene-AB11_RS23025;Dbxref=GenBank:WP_001137220.1;Name=WP_001137220.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB11_RS23025;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137220.1;transl_table=11 NZ_JHDH01000167.1 RefSeq pseudogene 3235 5420 . - . ID=gene-AB11_RS23030;Name=espL4;gbkey=Gene;gene=espL4;gene_biotype=pseudogene;locus_tag=AB11_RS23030;pseudo=true NZ_JHDH01000167.1 Protein Homology CDS 3235 5420 . - 0 ID=cds-AB11_RS23030;Parent=gene-AB11_RS23030;Note=frameshifted;gbkey=CDS;gene=espL4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AB11_RS23030;product=type III secretion system effector EspL4;pseudo=true;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 5737 6561 . - . ID=gene-AB11_RS23035;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AB11_RS23035;old_locus_tag=AB11_4436 NZ_JHDH01000167.1 Protein Homology CDS 5737 6561 . - 0 ID=cds-WP_001385054.1;Parent=gene-AB11_RS23035;Dbxref=GenBank:WP_001385054.1;Name=WP_001385054.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AB11_RS23035;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_001385054.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 6761 10444 . + . ID=gene-AB11_RS23040;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AB11_RS23040;old_locus_tag=AB11_4437 NZ_JHDH01000167.1 Protein Homology CDS 6761 10444 . + 0 ID=cds-WP_000096011.1;Parent=gene-AB11_RS23040;Dbxref=GenBank:WP_000096011.1;Name=WP_000096011.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=AB11_RS23040;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 10664 12295 . + . ID=gene-AB11_RS23045;Name=AB11_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23045;old_locus_tag=AB11_4438 NZ_JHDH01000167.1 Protein Homology CDS 10664 12295 . + 0 ID=cds-WP_000956830.1;Parent=gene-AB11_RS23045;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AB11_RS23045;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 12386 13075 . - . ID=gene-AB11_RS23050;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AB11_RS23050;old_locus_tag=AB11_4439 NZ_JHDH01000167.1 Protein Homology CDS 12386 13075 . - 0 ID=cds-WP_000421763.1;Parent=gene-AB11_RS23050;Dbxref=GenBank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AB11_RS23050;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 13287 14159 . + . ID=gene-AB11_RS23055;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AB11_RS23055;old_locus_tag=AB11_4440 NZ_JHDH01000167.1 Protein Homology CDS 13287 14159 . + 0 ID=cds-WP_000936377.1;Parent=gene-AB11_RS23055;Dbxref=GenBank:WP_000936377.1;Name=WP_000936377.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418446.1;locus_tag=AB11_RS23055;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936377.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 14292 14564 . - . ID=gene-AB11_RS23060;Name=AB11_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23060;old_locus_tag=AB11_4441 NZ_JHDH01000167.1 Protein Homology CDS 14292 14564 . - 0 ID=cds-WP_001207634.1;Parent=gene-AB11_RS23060;Dbxref=GenBank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AB11_RS23060;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 14817 16166 . - . ID=gene-AB11_RS23065;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AB11_RS23065;old_locus_tag=AB11_4442 NZ_JHDH01000167.1 Protein Homology CDS 14817 16166 . - 0 ID=cds-WP_001290310.1;Parent=gene-AB11_RS23065;Dbxref=GenBank:WP_001290310.1;Name=WP_001290310.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418448.1;locus_tag=AB11_RS23065;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290310.1;transl_table=11 NZ_JHDH01000167.1 cmsearch riboswitch 16258 16454 . - . ID=id-NZ_JHDH01000167.1:16258..16454;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDH01000167.1 RefSeq gene 16691 18340 . + . ID=gene-AB11_RS23070;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AB11_RS23070;old_locus_tag=AB11_4443 NZ_JHDH01000167.1 Protein Homology CDS 16691 18340 . + 0 ID=cds-WP_000789986.1;Parent=gene-AB11_RS23070;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AB11_RS23070;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 18839 19081 . + . ID=gene-AB11_RS23075;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AB11_RS23075;old_locus_tag=AB11_4444 NZ_JHDH01000167.1 Protein Homology CDS 18839 19081 . + 0 ID=cds-WP_000757333.1;Parent=gene-AB11_RS23075;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AB11_RS23075;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 19195 19833 . + . ID=gene-AB11_RS23080;Name=AB11_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23080;old_locus_tag=AB11_4445 NZ_JHDH01000167.1 Protein Homology CDS 19195 19833 . + 0 ID=cds-WP_001412008.1;Parent=gene-AB11_RS23080;Dbxref=GenBank:WP_001412008.1;Name=WP_001412008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AB11_RS23080;product=YjbF family lipoprotein;protein_id=WP_001412008.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 19830 20567 . + . ID=gene-AB11_RS23085;Name=AB11_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23085;old_locus_tag=AB11_4446 NZ_JHDH01000167.1 Protein Homology CDS 19830 20567 . + 0 ID=cds-WP_000595558.1;Parent=gene-AB11_RS23085;Dbxref=GenBank:WP_000595558.1;Name=WP_000595558.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AB11_RS23085;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595558.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 20567 22663 . + . ID=gene-AB11_RS23090;Name=AB11_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23090;old_locus_tag=AB11_4447 NZ_JHDH01000167.1 Protein Homology CDS 20567 22663 . + 0 ID=cds-WP_000745706.1;Parent=gene-AB11_RS23090;Dbxref=GenBank:WP_000745706.1;Name=WP_000745706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AB11_RS23090;product=YjbH domain-containing protein;protein_id=WP_000745706.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 22710 22988 . - . ID=gene-AB11_RS23095;Name=AB11_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23095 NZ_JHDH01000167.1 Protein Homology CDS 22710 22988 . - 0 ID=cds-WP_001295279.1;Parent=gene-AB11_RS23095;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AB11_RS23095;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 22989 23132 . + . ID=gene-AB11_RS23100;Name=AB11_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23100;old_locus_tag=AB11_4449 NZ_JHDH01000167.1 GeneMarkS-2+ CDS 22989 23132 . + 0 ID=cds-WP_000487766.1;Parent=gene-AB11_RS23100;Dbxref=GenBank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS23100;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 23258 23668 . + . ID=gene-AB11_RS23105;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AB11_RS23105;old_locus_tag=AB11_4450 NZ_JHDH01000167.1 Protein Homology CDS 23258 23668 . + 0 ID=cds-WP_000202902.1;Parent=gene-AB11_RS23105;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AB11_RS23105;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 23712 25187 . - . ID=gene-AB11_RS23110;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AB11_RS23110;old_locus_tag=AB11_4451 NZ_JHDH01000167.1 Protein Homology CDS 23712 25187 . - 0 ID=cds-WP_001097274.1;Parent=gene-AB11_RS23110;Dbxref=GenBank:WP_001097274.1;Name=WP_001097274.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AB11_RS23110;product=D-xylose transporter XylE;protein_id=WP_001097274.1;transl_table=11 NZ_JHDH01000167.1 RefSeq gene 25323 26303 . + . ID=gene-AB11_RS23115;Name=AB11_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23115;old_locus_tag=AB11_4452 NZ_JHDH01000167.1 Protein Homology CDS 25323 26303 . + 0 ID=cds-WP_000019440.1-6;Parent=gene-AB11_RS23115;Dbxref=GenBank:WP_000019440.1;Name=WP_000019440.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS23115;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019440.1;transl_table=11 ##sequence-region NZ_JHDH01000168.1 1 56344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000168.1 RefSeq region 1 56344 . + . ID=NZ_JHDH01000168.1:1..56344;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000168.1 RefSeq gene 1 958 . + . ID=gene-AB11_RS23120;Name=AB11_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23120;old_locus_tag=AB11_4453;partial=true;start_range=.,1 NZ_JHDH01000168.1 Protein Homology CDS 1 958 . + 1 ID=cds-WP_032222538.1-6;Parent=gene-AB11_RS23120;Dbxref=GenBank:WP_032222538.1;Name=WP_032222538.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB11_RS23120;partial=true;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032222538.1;start_range=.,1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 1413 2303 . - . ID=gene-AB11_RS23125;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AB11_RS23125;old_locus_tag=AB11_4454 NZ_JHDH01000168.1 Protein Homology CDS 1413 2303 . - 0 ID=cds-WP_001252058.1;Parent=gene-AB11_RS23125;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AB11_RS23125;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 2318 3862 . - . ID=gene-AB11_RS23130;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AB11_RS23130;old_locus_tag=AB11_4455 NZ_JHDH01000168.1 Protein Homology CDS 2318 3862 . - 0 ID=cds-WP_001297290.1;Parent=gene-AB11_RS23130;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AB11_RS23130;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 4016 5206 . - . ID=gene-AB11_RS23135;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AB11_RS23135;old_locus_tag=AB11_4456 NZ_JHDH01000168.1 Protein Homology CDS 4016 5206 . - 0 ID=cds-WP_000695387.1;Parent=gene-AB11_RS23135;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AB11_RS23135;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 5571 6686 . + . ID=gene-AB11_RS23140;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AB11_RS23140;old_locus_tag=AB11_4457 NZ_JHDH01000168.1 Protein Homology CDS 5571 6686 . + 0 ID=cds-WP_000179165.1;Parent=gene-AB11_RS23140;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AB11_RS23140;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 6758 8098 . + . ID=gene-AB11_RS23145;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AB11_RS23145;old_locus_tag=AB11_4458 NZ_JHDH01000168.1 Protein Homology CDS 6758 8098 . + 0 ID=cds-WP_000973658.1;Parent=gene-AB11_RS23145;Dbxref=GenBank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AB11_RS23145;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 8341 9261 . + . ID=gene-AB11_RS23150;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AB11_RS23150;old_locus_tag=AB11_4459 NZ_JHDH01000168.1 Protein Homology CDS 8341 9261 . + 0 ID=cds-WP_000783444.1;Parent=gene-AB11_RS23150;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AB11_RS23150;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 9490 11070 . + . ID=gene-AB11_RS23155;Name=AB11_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23155;old_locus_tag=AB11_4460 NZ_JHDH01000168.1 Protein Homology CDS 9490 11070 . + 0 ID=cds-WP_032224086.1;Parent=gene-AB11_RS23155;Dbxref=GenBank:WP_032224086.1;Name=WP_032224086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313048.1;locus_tag=AB11_RS23155;product=SopA family protein;protein_id=WP_032224086.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 11293 11790 . + . ID=gene-AB11_RS23160;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AB11_RS23160;old_locus_tag=AB11_4461 NZ_JHDH01000168.1 Protein Homology CDS 11293 11790 . + 0 ID=cds-WP_001326644.1;Parent=gene-AB11_RS23160;Dbxref=GenBank:WP_001326644.1;Name=WP_001326644.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418463.4;locus_tag=AB11_RS23160;product=chorismate lyase;protein_id=WP_001326644.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 11803 12675 . + . ID=gene-AB11_RS23165;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AB11_RS23165;old_locus_tag=AB11_4462 NZ_JHDH01000168.1 Protein Homology CDS 11803 12675 . + 0 ID=cds-WP_000455227.1;Parent=gene-AB11_RS23165;Dbxref=GenBank:WP_000455227.1;Name=WP_000455227.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AB11_RS23165;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 12830 15253 . - . ID=gene-AB11_RS23170;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AB11_RS23170;old_locus_tag=AB11_4463 NZ_JHDH01000168.1 Protein Homology CDS 12830 15253 . - 0 ID=cds-WP_000017354.1;Parent=gene-AB11_RS23170;Dbxref=GenBank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AB11_RS23170;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 15424 15792 . + . ID=gene-AB11_RS23175;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AB11_RS23175;old_locus_tag=AB11_4464 NZ_JHDH01000168.1 Protein Homology CDS 15424 15792 . + 0 ID=cds-WP_000002907.1;Parent=gene-AB11_RS23175;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AB11_RS23175;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 15902 16510 . + . ID=gene-AB11_RS23180;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AB11_RS23180;old_locus_tag=AB11_4465 NZ_JHDH01000168.1 Protein Homology CDS 15902 16510 . + 0 ID=cds-WP_000646078.1;Parent=gene-AB11_RS23180;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AB11_RS23180;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 16583 17908 . + . ID=gene-AB11_RS23185;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AB11_RS23185;old_locus_tag=AB11_4466 NZ_JHDH01000168.1 Protein Homology CDS 16583 17908 . + 0 ID=cds-WP_001301116.1;Parent=gene-AB11_RS23185;Dbxref=GenBank:WP_001301116.1;Name=WP_001301116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AB11_RS23185;product=MATE family efflux transporter DinF;protein_id=WP_001301116.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 18024 18233 . + . ID=gene-AB11_RS23190;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AB11_RS23190;old_locus_tag=AB11_4467 NZ_JHDH01000168.1 Protein Homology CDS 18024 18233 . + 0 ID=cds-WP_001030593.1;Parent=gene-AB11_RS23190;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AB11_RS23190;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 18275 18790 . - . ID=gene-AB11_RS23195;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AB11_RS23195;old_locus_tag=AB11_4468 NZ_JHDH01000168.1 Protein Homology CDS 18275 18790 . - 0 ID=cds-WP_001295691.1;Parent=gene-AB11_RS23195;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AB11_RS23195;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JHDH01000168.1 RefSeq pseudogene 19108 20093 . + . ID=gene-AB11_RS23200;Name=AB11_RS23200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS23200;old_locus_tag=AB11_4470;pseudo=true NZ_JHDH01000168.1 Protein Homology CDS 19108 20093 . + 0 ID=cds-AB11_RS23200;Parent=gene-AB11_RS23200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AB11_RS23200;product=DUF2713 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 20456 21493 . + . ID=gene-AB11_RS23205;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AB11_RS23205;old_locus_tag=AB11_4472 NZ_JHDH01000168.1 Protein Homology CDS 20456 21493 . + 0 ID=cds-WP_001329186.1;Parent=gene-AB11_RS23205;Dbxref=GenBank:WP_001329186.1;Name=WP_001329186.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AB11_RS23205;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001329186.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 21627 21869 . + . ID=gene-AB11_RS23210;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AB11_RS23210;old_locus_tag=AB11_4473 NZ_JHDH01000168.1 Protein Homology CDS 21627 21869 . + 0 ID=cds-WP_000891404.1;Parent=gene-AB11_RS23210;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AB11_RS23210;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 22035 23018 . - . ID=gene-AB11_RS23215;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AB11_RS23215;old_locus_tag=AB11_4474 NZ_JHDH01000168.1 Protein Homology CDS 22035 23018 . - 0 ID=cds-WP_000235509.1;Parent=gene-AB11_RS23215;Dbxref=GenBank:WP_000235509.1;Name=WP_000235509.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AB11_RS23215;product=quinone oxidoreductase;protein_id=WP_000235509.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 23101 24516 . + . ID=gene-AB11_RS23220;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AB11_RS23220;old_locus_tag=AB11_4475 NZ_JHDH01000168.1 Protein Homology CDS 23101 24516 . + 0 ID=cds-WP_000918363.1;Parent=gene-AB11_RS23220;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AB11_RS23220;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 24569 25648 . + . ID=gene-AB11_RS23225;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AB11_RS23225;old_locus_tag=AB11_4476 NZ_JHDH01000168.1 Protein Homology CDS 24569 25648 . + 0 ID=cds-WP_001147328.1;Parent=gene-AB11_RS23225;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AB11_RS23225;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 25901 27094 . + . ID=gene-AB11_RS23230;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AB11_RS23230;old_locus_tag=AB11_4478 NZ_JHDH01000168.1 Protein Homology CDS 25901 27094 . + 0 ID=cds-WP_000486985.1;Parent=gene-AB11_RS23230;Dbxref=GenBank:WP_000486985.1;Name=WP_000486985.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AB11_RS23230;product=aromatic amino acid transaminase;protein_id=WP_000486985.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 27596 27799 . - . ID=gene-AB11_RS23235;Name=yjbS;gbkey=Gene;gene=yjbS;gene_biotype=protein_coding;locus_tag=AB11_RS23235;old_locus_tag=AB11_4480 NZ_JHDH01000168.1 Protein Homology CDS 27596 27799 . - 0 ID=cds-WP_001321562.1;Parent=gene-AB11_RS23235;Dbxref=GenBank:WP_001321562.1;Name=WP_001321562.1;gbkey=CDS;gene=yjbS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AB11_RS23235;product=protein YjbS;protein_id=WP_001321562.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 28201 28914 . + . ID=gene-AB11_RS23240;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AB11_RS23240;old_locus_tag=AB11_4482 NZ_JHDH01000168.1 Protein Homology CDS 28201 28914 . + 0 ID=cds-WP_001226928.1;Parent=gene-AB11_RS23240;Dbxref=GenBank:WP_001226928.1;Name=WP_001226928.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AB11_RS23240;product=acid phosphatase AphA;protein_id=WP_001226928.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 29025 29441 . + . ID=gene-AB11_RS23245;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AB11_RS23245;old_locus_tag=AB11_4483 NZ_JHDH01000168.1 Protein Homology CDS 29025 29441 . + 0 ID=cds-WP_000270375.1;Parent=gene-AB11_RS23245;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AB11_RS23245;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 29445 29801 . + . ID=gene-AB11_RS23250;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AB11_RS23250;old_locus_tag=AB11_4484 NZ_JHDH01000168.1 Protein Homology CDS 29445 29801 . + 0 ID=cds-WP_000155657.1;Parent=gene-AB11_RS23250;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AB11_RS23250;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 29836 32658 . - . ID=gene-AB11_RS23255;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AB11_RS23255;old_locus_tag=AB11_4485 NZ_JHDH01000168.1 Protein Homology CDS 29836 32658 . - 0 ID=cds-WP_000357740.1;Parent=gene-AB11_RS23255;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AB11_RS23255;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 32912 33448 . + . ID=gene-AB11_RS23260;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AB11_RS23260;old_locus_tag=AB11_4486 NZ_JHDH01000168.1 Protein Homology CDS 32912 33448 . + 0 ID=cds-WP_000168305.1;Parent=gene-AB11_RS23260;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AB11_RS23260;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 33547 33828 . - . ID=gene-AB11_RS23265;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AB11_RS23265;old_locus_tag=AB11_4487 NZ_JHDH01000168.1 Protein Homology CDS 33547 33828 . - 0 ID=cds-WP_001295689.1;Parent=gene-AB11_RS23265;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AB11_RS23265;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 34258 35844 . + . ID=gene-AB11_RS23270;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AB11_RS23270;old_locus_tag=AB11_4488 NZ_JHDH01000168.1 Protein Homology CDS 34258 35844 . + 0 ID=cds-WP_032224090.1;Parent=gene-AB11_RS23270;Dbxref=GenBank:WP_032224090.1;Name=WP_032224090.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AB11_RS23270;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_032224090.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 35847 36170 . - . ID=gene-AB11_RS23275;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AB11_RS23275;old_locus_tag=AB11_4489 NZ_JHDH01000168.1 Protein Homology CDS 35847 36170 . - 0 ID=cds-WP_000019358.1;Parent=gene-AB11_RS23275;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AB11_RS23275;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 36256 36720 . + . ID=gene-AB11_RS23280;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AB11_RS23280;old_locus_tag=AB11_4490 NZ_JHDH01000168.1 Protein Homology CDS 36256 36720 . + 0 ID=cds-WP_000412428.1;Parent=gene-AB11_RS23280;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AB11_RS23280;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 37266 38615 . + . ID=gene-AB11_RS23285;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AB11_RS23285;old_locus_tag=AB11_4492 NZ_JHDH01000168.1 Protein Homology CDS 37266 38615 . + 0 ID=cds-WP_000106882.1;Parent=gene-AB11_RS23285;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AB11_RS23285;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 38767 40416 . + . ID=gene-AB11_RS23290;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AB11_RS23290;old_locus_tag=AB11_4493 NZ_JHDH01000168.1 Protein Homology CDS 38767 40416 . + 0 ID=cds-WP_000402207.1;Parent=gene-AB11_RS23290;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AB11_RS23290;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 40570 41862 . - . ID=gene-AB11_RS23295;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AB11_RS23295;old_locus_tag=AB11_4494 NZ_JHDH01000168.1 Protein Homology CDS 40570 41862 . - 0 ID=cds-WP_032224093.1;Parent=gene-AB11_RS23295;Dbxref=GenBank:WP_032224093.1;Name=WP_032224093.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AB11_RS23295;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_032224093.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 42040 43689 . - . ID=gene-AB11_RS23300;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AB11_RS23300;old_locus_tag=AB11_4495 NZ_JHDH01000168.1 Protein Homology CDS 42040 43689 . - 0 ID=cds-WP_000832573.1;Parent=gene-AB11_RS23300;Dbxref=GenBank:WP_000832573.1;Name=WP_000832573.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AB11_RS23300;product=cation/acetate symporter ActP;protein_id=WP_000832573.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 43686 44000 . - . ID=gene-AB11_RS23305;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AB11_RS23305;old_locus_tag=AB11_4496 NZ_JHDH01000168.1 Protein Homology CDS 43686 44000 . - 0 ID=cds-WP_001014565.1;Parent=gene-AB11_RS23305;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AB11_RS23305;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JHDH01000168.1 RefSeq pseudogene 44201 46160 . - . ID=gene-AB11_RS23310;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=AB11_RS23310;pseudo=true NZ_JHDH01000168.1 Protein Homology CDS 44201 46160 . - 0 ID=cds-AB11_RS23310;Parent=gene-AB11_RS23310;Note=frameshifted;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AB11_RS23310;product=acetate--CoA ligase;pseudo=true;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 46553 47989 . + . ID=gene-AB11_RS23315;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AB11_RS23315;old_locus_tag=AB11_4499 NZ_JHDH01000168.1 Protein Homology CDS 46553 47989 . + 0 ID=cds-WP_000196875.1;Parent=gene-AB11_RS23315;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AB11_RS23315;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 48034 48600 . + . ID=gene-AB11_RS23320;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AB11_RS23320;old_locus_tag=AB11_4500 NZ_JHDH01000168.1 Protein Homology CDS 48034 48600 . + 0 ID=cds-WP_001296647.1;Parent=gene-AB11_RS23320;Dbxref=GenBank:WP_001296647.1;Name=WP_001296647.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AB11_RS23320;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001296647.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 48597 49268 . + . ID=gene-AB11_RS23325;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AB11_RS23325;old_locus_tag=AB11_4501 NZ_JHDH01000168.1 Protein Homology CDS 48597 49268 . + 0 ID=cds-WP_000220281.1;Parent=gene-AB11_RS23325;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AB11_RS23325;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 49265 50221 . + . ID=gene-AB11_RS23330;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AB11_RS23330;old_locus_tag=AB11_4502 NZ_JHDH01000168.1 Protein Homology CDS 49265 50221 . + 0 ID=cds-WP_000195164.1;Parent=gene-AB11_RS23330;Dbxref=GenBank:WP_000195164.1;Name=WP_000195164.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AB11_RS23330;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195164.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 50241 51959 . + . ID=gene-AB11_RS23335;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AB11_RS23335;old_locus_tag=AB11_4503 NZ_JHDH01000168.1 Protein Homology CDS 50241 51959 . + 0 ID=cds-WP_071840912.1;Parent=gene-AB11_RS23335;Dbxref=GenBank:WP_071840912.1;Name=WP_071840912.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AB11_RS23335;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071840912.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 51952 52335 . + . ID=gene-AB11_RS23340;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AB11_RS23340;old_locus_tag=AB11_4504 NZ_JHDH01000168.1 Protein Homology CDS 51952 52335 . + 0 ID=cds-WP_001032525.1;Parent=gene-AB11_RS23340;Dbxref=GenBank:WP_001032525.1;Name=WP_001032525.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AB11_RS23340;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032525.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 52332 52928 . + . ID=gene-AB11_RS23345;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AB11_RS23345;old_locus_tag=AB11_4505 NZ_JHDH01000168.1 Protein Homology CDS 52332 52928 . + 0 ID=cds-WP_000812895.1;Parent=gene-AB11_RS23345;Dbxref=GenBank:WP_000812895.1;Name=WP_000812895.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AB11_RS23345;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812895.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 53270 54583 . + . ID=gene-AB11_RS23350;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AB11_RS23350;old_locus_tag=AB11_4507 NZ_JHDH01000168.1 Protein Homology CDS 53270 54583 . + 0 ID=cds-WP_000835799.1;Parent=gene-AB11_RS23350;Dbxref=GenBank:WP_000835799.1;Name=WP_000835799.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AB11_RS23350;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000835799.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 55113 55802 . - . ID=gene-AB11_RS23355;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AB11_RS23355;old_locus_tag=AB11_4508 NZ_JHDH01000168.1 Protein Homology CDS 55113 55802 . - 0 ID=cds-WP_000719886.1-2;Parent=gene-AB11_RS23355;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AB11_RS23355;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JHDH01000168.1 RefSeq gene 55896 56344 . - . ID=gene-AB11_RS23360;Name=AB11_RS23360;end_range=56344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23360;old_locus_tag=AB11_4509;partial=true NZ_JHDH01000168.1 Protein Homology CDS 55896 56344 . - 2 ID=cds-WP_032222702.1-2;Parent=gene-AB11_RS23360;Dbxref=GenBank:WP_032222702.1;Name=WP_032222702.1;Ontology_term=GO:0016491,GO:0043546;end_range=56344,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AB11_RS23360;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_032222702.1;transl_table=11 ##sequence-region NZ_JHDH01000169.1 1 95774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000169.1 RefSeq region 1 95774 . + . ID=NZ_JHDH01000169.1:1..95774;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000169.1 RefSeq gene 28 717 . - . ID=gene-AB11_RS23365;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AB11_RS23365;old_locus_tag=AB11_4510 NZ_JHDH01000169.1 Protein Homology CDS 28 717 . - 0 ID=cds-WP_000719886.1-3;Parent=gene-AB11_RS23365;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AB11_RS23365;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 811 2958 . - . ID=gene-AB11_RS23370;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AB11_RS23370;old_locus_tag=AB11_4511 NZ_JHDH01000169.1 Protein Homology CDS 811 2958 . - 0 ID=cds-WP_001300547.1;Parent=gene-AB11_RS23370;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AB11_RS23370;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(2539..2541)%2Caa:Sec);transl_table=11 NZ_JHDH01000169.1 RefSeq pseudogene 3156 4622 . - . ID=gene-AB11_RS23375;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=pseudogene;locus_tag=AB11_RS23375;old_locus_tag=AB11_4515;pseudo=true NZ_JHDH01000169.1 Protein Homology CDS 3156 4622 . - 0 ID=cds-AB11_RS23375;Parent=gene-AB11_RS23375;Note=internal stop;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418504.1;locus_tag=AB11_RS23375;product=multidrug efflux transporter outer membrane subunit MdtP;pseudo=true;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 4619 6670 . - . ID=gene-AB11_RS23380;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AB11_RS23380;old_locus_tag=AB11_4516 NZ_JHDH01000169.1 Protein Homology CDS 4619 6670 . - 0 ID=cds-WP_001275207.1;Parent=gene-AB11_RS23380;Dbxref=GenBank:WP_001275207.1;Name=WP_001275207.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AB11_RS23380;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_001275207.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 6670 7701 . - . ID=gene-AB11_RS23385;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AB11_RS23385;old_locus_tag=AB11_4517 NZ_JHDH01000169.1 Protein Homology CDS 6670 7701 . - 0 ID=cds-WP_000446378.1;Parent=gene-AB11_RS23385;Dbxref=GenBank:WP_000446378.1;Name=WP_000446378.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AB11_RS23385;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446378.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 7720 7995 . - . ID=gene-AB11_RS23390;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AB11_RS23390;old_locus_tag=AB11_4518 NZ_JHDH01000169.1 Protein Homology CDS 7720 7995 . - 0 ID=cds-WP_001295389.1;Parent=gene-AB11_RS23390;Dbxref=GenBank:WP_001295389.1;Name=WP_001295389.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AB11_RS23390;product=YtcA family lipoprotein;protein_id=WP_001295389.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 8204 10189 . - . ID=gene-AB11_RS23395;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AB11_RS23395;old_locus_tag=AB11_4519 NZ_JHDH01000169.1 Protein Homology CDS 8204 10189 . - 0 ID=cds-WP_001066021.1;Parent=gene-AB11_RS23395;Dbxref=GenBank:WP_001066021.1;Name=WP_001066021.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AB11_RS23395;product=alkyl sulfatase YjcS;protein_id=WP_001066021.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 10462 11391 . - . ID=gene-AB11_RS23400;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=AB11_RS23400;old_locus_tag=AB11_4520 NZ_JHDH01000169.1 Protein Homology CDS 10462 11391 . - 0 ID=cds-WP_021571026.1;Parent=gene-AB11_RS23400;Dbxref=GenBank:WP_021571026.1;Name=WP_021571026.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AB11_RS23400;product=allose kinase;protein_id=WP_021571026.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 11375 12070 . - . ID=gene-AB11_RS23405;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=AB11_RS23405;old_locus_tag=AB11_4521 NZ_JHDH01000169.1 Protein Homology CDS 11375 12070 . - 0 ID=cds-WP_001311314.1;Parent=gene-AB11_RS23405;Dbxref=GenBank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AB11_RS23405;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 12081 13061 . - . ID=gene-AB11_RS23410;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AB11_RS23410;old_locus_tag=AB11_4522 NZ_JHDH01000169.1 Protein Homology CDS 12081 13061 . - 0 ID=cds-WP_000507106.1;Parent=gene-AB11_RS23410;Dbxref=GenBank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AB11_RS23410;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 13040 14572 . - . ID=gene-AB11_RS23415;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=AB11_RS23415;old_locus_tag=AB11_4523 NZ_JHDH01000169.1 Protein Homology CDS 13040 14572 . - 0 ID=cds-WP_000235257.1;Parent=gene-AB11_RS23415;Dbxref=GenBank:WP_000235257.1;Name=WP_000235257.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AB11_RS23415;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_000235257.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 14699 15634 . - . ID=gene-AB11_RS23420;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AB11_RS23420;old_locus_tag=AB11_4524 NZ_JHDH01000169.1 Protein Homology CDS 14699 15634 . - 0 ID=cds-WP_001046187.1;Parent=gene-AB11_RS23420;Dbxref=GenBank:WP_001046187.1;Name=WP_001046187.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AB11_RS23420;product=D-allose transporter substrate-binding protein;protein_id=WP_001046187.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 15693 16583 . - . ID=gene-AB11_RS23425;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AB11_RS23425;old_locus_tag=AB11_4525 NZ_JHDH01000169.1 Protein Homology CDS 15693 16583 . - 0 ID=cds-WP_000083216.1;Parent=gene-AB11_RS23425;Dbxref=GenBank:WP_000083216.1;Name=WP_000083216.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AB11_RS23425;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000083216.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 16942 17391 . + . ID=gene-AB11_RS23430;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AB11_RS23430;old_locus_tag=AB11_4526 NZ_JHDH01000169.1 Protein Homology CDS 16942 17391 . + 0 ID=cds-WP_000716794.1;Parent=gene-AB11_RS23430;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AB11_RS23430;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 17460 17789 . + . ID=gene-AB11_RS23435;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AB11_RS23435;old_locus_tag=AB11_4527 NZ_JHDH01000169.1 Protein Homology CDS 17460 17789 . + 0 ID=cds-WP_000819745.1;Parent=gene-AB11_RS23435;Dbxref=GenBank:WP_000819745.1;Name=WP_000819745.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AB11_RS23435;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819745.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 17936 18694 . - . ID=gene-AB11_RS23440;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AB11_RS23440;old_locus_tag=AB11_4528 NZ_JHDH01000169.1 Protein Homology CDS 17936 18694 . - 0 ID=cds-WP_000059959.1;Parent=gene-AB11_RS23440;Dbxref=GenBank:WP_000059959.1;Name=WP_000059959.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AB11_RS23440;product=phosphonate metabolism protein PhnP;protein_id=WP_000059959.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 18696 19130 . - . ID=gene-AB11_RS23445;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AB11_RS23445;old_locus_tag=AB11_4529 NZ_JHDH01000169.1 Protein Homology CDS 18696 19130 . - 0 ID=cds-WP_032224104.1;Parent=gene-AB11_RS23445;Dbxref=GenBank:WP_032224104.1;Name=WP_032224104.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AB11_RS23445;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_032224104.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 19117 19674 . - . ID=gene-AB11_RS23450;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AB11_RS23450;old_locus_tag=AB11_4530 NZ_JHDH01000169.1 Protein Homology CDS 19117 19674 . - 0 ID=cds-WP_000147006.1;Parent=gene-AB11_RS23450;Dbxref=GenBank:WP_000147006.1;Name=WP_000147006.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AB11_RS23450;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000147006.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 19674 20810 . - . ID=gene-AB11_RS23455;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AB11_RS23455;old_locus_tag=AB11_4531 NZ_JHDH01000169.1 Protein Homology CDS 19674 20810 . - 0 ID=cds-WP_000586268.1;Parent=gene-AB11_RS23455;Dbxref=GenBank:WP_000586268.1;Name=WP_000586268.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AB11_RS23455;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586268.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 20807 21487 . - . ID=gene-AB11_RS23460;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AB11_RS23460;old_locus_tag=AB11_4532 NZ_JHDH01000169.1 Protein Homology CDS 20807 21487 . - 0 ID=cds-WP_000611426.1;Parent=gene-AB11_RS23460;Dbxref=GenBank:WP_000611426.1;Name=WP_000611426.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313106.1;locus_tag=AB11_RS23460;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611426.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 21598 22356 . - . ID=gene-AB11_RS23465;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AB11_RS23465;old_locus_tag=AB11_4533 NZ_JHDH01000169.1 Protein Homology CDS 21598 22356 . - 0 ID=cds-WP_001075518.1;Parent=gene-AB11_RS23465;Dbxref=GenBank:WP_001075518.1;Name=WP_001075518.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313107.1;locus_tag=AB11_RS23465;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075518.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 22353 23198 . - . ID=gene-AB11_RS23470;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AB11_RS23470;old_locus_tag=AB11_4534 NZ_JHDH01000169.1 Protein Homology CDS 22353 23198 . - 0 ID=cds-WP_000002307.1;Parent=gene-AB11_RS23470;Dbxref=GenBank:WP_000002307.1;Name=WP_000002307.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AB11_RS23470;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002307.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 23191 24255 . - . ID=gene-AB11_RS23475;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AB11_RS23475;old_locus_tag=AB11_4535 NZ_JHDH01000169.1 Protein Homology CDS 23191 24255 . - 0 ID=cds-WP_001351882.1;Parent=gene-AB11_RS23475;Dbxref=GenBank:WP_001351882.1;Name=WP_001351882.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AB11_RS23475;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001351882.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 24255 24839 . - . ID=gene-AB11_RS23480;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AB11_RS23480;old_locus_tag=AB11_4536 NZ_JHDH01000169.1 Protein Homology CDS 24255 24839 . - 0 ID=cds-WP_000171616.1;Parent=gene-AB11_RS23480;Dbxref=GenBank:WP_000171616.1;Name=WP_000171616.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=AB11_RS23480;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171616.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 24836 25288 . - . ID=gene-AB11_RS23485;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AB11_RS23485;old_locus_tag=AB11_4537 NZ_JHDH01000169.1 Protein Homology CDS 24836 25288 . - 0 ID=cds-WP_000542802.1;Parent=gene-AB11_RS23485;Dbxref=GenBank:WP_000542802.1;Name=WP_000542802.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AB11_RS23485;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542802.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 25289 26014 . - . ID=gene-AB11_RS23490;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AB11_RS23490;old_locus_tag=AB11_4538 NZ_JHDH01000169.1 Protein Homology CDS 25289 26014 . - 0 ID=cds-WP_001351883.1;Parent=gene-AB11_RS23490;Dbxref=GenBank:WP_001351883.1;Name=WP_001351883.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AB11_RS23490;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001351883.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 26035 26814 . - . ID=gene-AB11_RS23495;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AB11_RS23495;old_locus_tag=AB11_4539 NZ_JHDH01000169.1 Protein Homology CDS 26035 26814 . - 0 ID=cds-WP_001193500.1;Parent=gene-AB11_RS23495;Dbxref=GenBank:WP_001193500.1;Name=WP_001193500.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AB11_RS23495;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001193500.1;transl_table=11 NZ_JHDH01000169.1 RefSeq pseudogene 26920 27936 . - . ID=gene-AB11_RS23500;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=pseudogene;locus_tag=AB11_RS23500;old_locus_tag=AB11_4540;pseudo=true NZ_JHDH01000169.1 Protein Homology CDS 26920 27936 . - 0 ID=cds-AB11_RS23500;Parent=gene-AB11_RS23500;Note=internal stop;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AB11_RS23500;product=phosphonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 27961 28749 . - . ID=gene-AB11_RS23505;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AB11_RS23505;old_locus_tag=AB11_4541 NZ_JHDH01000169.1 Protein Homology CDS 27961 28749 . - 0 ID=cds-WP_001193408.1;Parent=gene-AB11_RS23505;Dbxref=GenBank:WP_001193408.1;Name=WP_001193408.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418530.1;locus_tag=AB11_RS23505;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193408.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 28882 29325 . - . ID=gene-AB11_RS23510;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AB11_RS23510;old_locus_tag=AB11_4542 NZ_JHDH01000169.1 Protein Homology CDS 28882 29325 . - 0 ID=cds-WP_001131339.1;Parent=gene-AB11_RS23510;Dbxref=GenBank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AB11_RS23510;product=VOC family metalloprotein YjdN;protein_id=WP_001131339.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 29683 30018 . - . ID=gene-AB11_RS23515;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AB11_RS23515;old_locus_tag=AB11_4543 NZ_JHDH01000169.1 Protein Homology CDS 29683 30018 . - 0 ID=cds-WP_001300891.1;Parent=gene-AB11_RS23515;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AB11_RS23515;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 30419 32647 . + . ID=gene-AB11_RS23520;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AB11_RS23520;old_locus_tag=AB11_4544 NZ_JHDH01000169.1 Protein Homology CDS 30419 32647 . + 0 ID=cds-WP_000288603.1;Parent=gene-AB11_RS23520;Dbxref=GenBank:WP_000288603.1;Name=WP_000288603.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AB11_RS23520;product=clamp-binding protein CrfC;protein_id=WP_000288603.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 32644 33510 . + . ID=gene-AB11_RS23525;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AB11_RS23525;old_locus_tag=AB11_4545 NZ_JHDH01000169.1 Protein Homology CDS 32644 33510 . + 0 ID=cds-WP_001556358.1;Parent=gene-AB11_RS23525;Dbxref=GenBank:WP_001556358.1;Name=WP_001556358.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AB11_RS23525;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_001556358.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 33774 35276 . + . ID=gene-AB11_RS23530;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AB11_RS23530;old_locus_tag=AB11_4546 NZ_JHDH01000169.1 Protein Homology CDS 33774 35276 . + 0 ID=cds-WP_001351884.1;Parent=gene-AB11_RS23530;Dbxref=GenBank:WP_001351884.1;Name=WP_001351884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AB11_RS23530;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001351884.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 35388 35477 . + . ID=gene-AB11_RS23535;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AB11_RS23535 NZ_JHDH01000169.1 Protein Homology CDS 35388 35477 . + 0 ID=cds-WP_000797657.1;Parent=gene-AB11_RS23535;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AB11_RS23535;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 35453 36553 . - . ID=gene-AB11_RS23540;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AB11_RS23540;old_locus_tag=AB11_4547 NZ_JHDH01000169.1 Protein Homology CDS 35453 36553 . - 0 ID=cds-WP_001051087.1;Parent=gene-AB11_RS23540;Dbxref=GenBank:WP_001051087.1;Name=WP_001051087.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AB11_RS23540;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051087.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 36554 37222 . - . ID=gene-AB11_RS23545;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AB11_RS23545;old_locus_tag=AB11_4548 NZ_JHDH01000169.1 Protein Homology CDS 36554 37222 . - 0 ID=cds-WP_000697915.1;Parent=gene-AB11_RS23545;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AB11_RS23545;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 37219 38862 . - . ID=gene-AB11_RS23550;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AB11_RS23550;old_locus_tag=AB11_4549 NZ_JHDH01000169.1 Protein Homology CDS 37219 38862 . - 0 ID=cds-WP_000919792.1;Parent=gene-AB11_RS23550;Dbxref=GenBank:WP_000919792.1;Name=WP_000919792.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AB11_RS23550;product=phosphoethanolamine transferase EptA;protein_id=WP_000919792.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 38966 40303 . - . ID=gene-AB11_RS23555;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AB11_RS23555;old_locus_tag=AB11_4550 NZ_JHDH01000169.1 Protein Homology CDS 38966 40303 . - 0 ID=cds-WP_000093154.1;Parent=gene-AB11_RS23555;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AB11_RS23555;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 40440 41201 . - . ID=gene-AB11_RS23560;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AB11_RS23560;old_locus_tag=AB11_4551 NZ_JHDH01000169.1 Protein Homology CDS 40440 41201 . - 0 ID=cds-WP_001217060.1;Parent=gene-AB11_RS23560;Dbxref=GenBank:WP_001217060.1;Name=WP_001217060.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418540.1;locus_tag=AB11_RS23560;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217060.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 41526 43793 . - . ID=gene-AB11_RS23565;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AB11_RS23565;old_locus_tag=AB11_4552 NZ_JHDH01000169.1 Protein Homology CDS 41526 43793 . - 0 ID=cds-WP_001381593.1;Parent=gene-AB11_RS23565;Dbxref=GenBank:WP_001381593.1;Name=WP_001381593.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AB11_RS23565;product=arginine decarboxylase;protein_id=WP_001381593.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 43992 44900 . - . ID=gene-AB11_RS23570;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AB11_RS23570;old_locus_tag=AB11_4553 NZ_JHDH01000169.1 Protein Homology CDS 43992 44900 . - 0 ID=cds-WP_001090758.1;Parent=gene-AB11_RS23570;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AB11_RS23570;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 45183 46538 . + . ID=gene-AB11_RS23575;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AB11_RS23575;old_locus_tag=AB11_4554 NZ_JHDH01000169.1 Protein Homology CDS 45183 46538 . + 0 ID=cds-WP_000986601.1;Parent=gene-AB11_RS23575;Dbxref=GenBank:WP_000986601.1;Name=WP_000986601.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AB11_RS23575;product=alpha-galactosidase;protein_id=WP_000986601.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 46641 48062 . + . ID=gene-AB11_RS23580;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AB11_RS23580;old_locus_tag=AB11_4555 NZ_JHDH01000169.1 Protein Homology CDS 46641 48062 . + 0 ID=cds-WP_000028111.1;Parent=gene-AB11_RS23580;Dbxref=GenBank:WP_000028111.1;Name=WP_000028111.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AB11_RS23580;product=melibiose:sodium transporter MelB;protein_id=WP_000028111.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 48201 48830 . - . ID=gene-AB11_RS23585;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AB11_RS23585;old_locus_tag=AB11_4556 NZ_JHDH01000169.1 Protein Homology CDS 48201 48830 . - 0 ID=cds-WP_001638650.1;Parent=gene-AB11_RS23585;Dbxref=GenBank:WP_001638650.1;Name=WP_001638650.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418545.1;locus_tag=AB11_RS23585;product=DUF2238 domain-containing protein;protein_id=WP_001638650.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 48953 50599 . - . ID=gene-AB11_RS23590;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB11_RS23590;old_locus_tag=AB11_4557 NZ_JHDH01000169.1 Protein Homology CDS 48953 50599 . - 0 ID=cds-WP_000066707.1;Parent=gene-AB11_RS23590;Dbxref=GenBank:WP_000066707.1;Name=WP_000066707.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AB11_RS23590;product=class I fumarate hydratase;protein_id=WP_000066707.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 50677 52017 . - . ID=gene-AB11_RS23595;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AB11_RS23595;old_locus_tag=AB11_4558 NZ_JHDH01000169.1 Protein Homology CDS 50677 52017 . - 0 ID=cds-WP_000899522.1;Parent=gene-AB11_RS23595;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AB11_RS23595;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 52588 53307 . - . ID=gene-AB11_RS23600;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AB11_RS23600;old_locus_tag=AB11_4559 NZ_JHDH01000169.1 Protein Homology CDS 52588 53307 . - 0 ID=cds-WP_000611288.1;Parent=gene-AB11_RS23600;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AB11_RS23600;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 53304 54935 . - . ID=gene-AB11_RS23605;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AB11_RS23605;old_locus_tag=AB11_4560 NZ_JHDH01000169.1 Protein Homology CDS 53304 54935 . - 0 ID=cds-WP_021571028.1;Parent=gene-AB11_RS23605;Dbxref=GenBank:WP_021571028.1;Name=WP_021571028.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AB11_RS23605;product=sensor histidine kinase;protein_id=WP_021571028.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 55116 55346 . + . ID=gene-AB11_RS23610;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AB11_RS23610;old_locus_tag=AB11_4562 NZ_JHDH01000169.1 Protein Homology CDS 55116 55346 . + 0 ID=cds-WP_000371704.1;Parent=gene-AB11_RS23610;Dbxref=GenBank:WP_000371704.1;Name=WP_000371704.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AB11_RS23610;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371704.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 55358 55630 . + . ID=gene-AB11_RS23615;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AB11_RS23615;old_locus_tag=AB11_4563 NZ_JHDH01000169.1 Protein Homology CDS 55358 55630 . + 0 ID=cds-WP_000405651.1;Parent=gene-AB11_RS23615;Dbxref=GenBank:WP_000405651.1;Name=WP_000405651.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418551.1;locus_tag=AB11_RS23615;product=GNAT family N-acetyltransferase;protein_id=WP_000405651.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 55857 56153 . + . ID=gene-AB11_RS23620;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB11_RS23620;old_locus_tag=AB11_4564 NZ_JHDH01000169.1 Protein Homology CDS 55857 56153 . + 0 ID=cds-WP_000398619.1;Parent=gene-AB11_RS23620;Dbxref=GenBank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AB11_RS23620;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 56181 56354 . + . ID=gene-AB11_RS23625;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AB11_RS23625;old_locus_tag=AB11_4565 NZ_JHDH01000169.1 Protein Homology CDS 56181 56354 . + 0 ID=cds-WP_001173343.1;Parent=gene-AB11_RS23625;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AB11_RS23625;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 56473 57990 . - . ID=gene-AB11_RS23630;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB11_RS23630;old_locus_tag=AB11_4566 NZ_JHDH01000169.1 Protein Homology CDS 56473 57990 . - 0 ID=cds-WP_001295074.1;Parent=gene-AB11_RS23630;Dbxref=GenBank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB11_RS23630;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 58227 59684 . - . ID=gene-AB11_RS23635;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AB11_RS23635;old_locus_tag=AB11_4567 NZ_JHDH01000169.1 Protein Homology CDS 58227 59684 . - 0 ID=cds-WP_000856829.1;Parent=gene-AB11_RS23635;Dbxref=GenBank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AB11_RS23635;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856829.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 59743 61890 . - . ID=gene-AB11_RS23640;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AB11_RS23640;old_locus_tag=AB11_4568 NZ_JHDH01000169.1 Protein Homology CDS 59743 61890 . - 0 ID=cds-WP_001295383.1;Parent=gene-AB11_RS23640;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AB11_RS23640;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 61970 63304 . - . ID=gene-AB11_RS23645;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AB11_RS23645;old_locus_tag=AB11_4569 NZ_JHDH01000169.1 Protein Homology CDS 61970 63304 . - 0 ID=cds-WP_000092909.1;Parent=gene-AB11_RS23645;Dbxref=GenBank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AB11_RS23645;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 63669 65207 . - . ID=gene-AB11_RS23650;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AB11_RS23650;old_locus_tag=AB11_4570 NZ_JHDH01000169.1 Protein Homology CDS 63669 65207 . - 0 ID=cds-WP_001187173.1;Parent=gene-AB11_RS23650;Dbxref=GenBank:WP_001187173.1;Name=WP_001187173.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418557.1;locus_tag=AB11_RS23650;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187173.1;transl_table=11 NZ_JHDH01000169.1 RefSeq pseudogene 65467 65626 . - . ID=gene-AB11_RS26125;Name=AB11_RS26125;end_range=65626,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26125;partial=true;pseudo=true NZ_JHDH01000169.1 Protein Homology CDS 65467 65626 . - 0 ID=cds-AB11_RS26125;Parent=gene-AB11_RS26125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=65626,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AB11_RS26125;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 65824 65899 . - . ID=gene-AB11_RS23655;Name=AB11_RS23655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS23655;old_locus_tag=AB11_4572 NZ_JHDH01000169.1 tRNAscan-SE tRNA 65824 65899 . - . ID=rna-AB11_RS23655;Parent=gene-AB11_RS23655;anticodon=(pos:complement(65864..65866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23655;product=tRNA-Phe NZ_JHDH01000169.1 tRNAscan-SE exon 65824 65899 . - . ID=exon-AB11_RS23655-1;Parent=rna-AB11_RS23655;anticodon=(pos:complement(65864..65866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23655;product=tRNA-Phe NZ_JHDH01000169.1 RefSeq gene 66006 66581 . - . ID=gene-AB11_RS23660;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AB11_RS23660;old_locus_tag=AB11_4573 NZ_JHDH01000169.1 Protein Homology CDS 66006 66581 . - 0 ID=cds-WP_001188520.1;Parent=gene-AB11_RS23660;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AB11_RS23660;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 66618 68315 . - . ID=gene-AB11_RS23665;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AB11_RS23665;old_locus_tag=AB11_4574 NZ_JHDH01000169.1 Protein Homology CDS 66618 68315 . - 0 ID=cds-WP_000068922.1;Parent=gene-AB11_RS23665;Dbxref=GenBank:WP_000068922.1;Name=WP_000068922.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AB11_RS23665;product=protein-disulfide reductase DsbD;protein_id=WP_000068922.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 68291 68629 . - . ID=gene-AB11_RS23670;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AB11_RS23670;old_locus_tag=AB11_4575 NZ_JHDH01000169.1 Protein Homology CDS 68291 68629 . - 0 ID=cds-WP_032224111.1;Parent=gene-AB11_RS23670;Dbxref=GenBank:WP_032224111.1;Name=WP_032224111.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AB11_RS23670;product=divalent cation tolerance protein CutA;protein_id=WP_032224111.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 68745 70046 . - . ID=gene-AB11_RS23675;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AB11_RS23675;old_locus_tag=AB11_4576 NZ_JHDH01000169.1 Protein Homology CDS 68745 70046 . - 0 ID=cds-WP_000961959.1;Parent=gene-AB11_RS23675;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AB11_RS23675;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 70164 71600 . - . ID=gene-AB11_RS23680;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AB11_RS23680;old_locus_tag=AB11_4577 NZ_JHDH01000169.1 Protein Homology CDS 70164 71600 . - 0 ID=cds-WP_000069437.1;Parent=gene-AB11_RS23680;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AB11_RS23680;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 71937 72413 . + . ID=gene-AB11_RS23685;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AB11_RS23685;old_locus_tag=AB11_4578 NZ_JHDH01000169.1 Protein Homology CDS 71937 72413 . + 0 ID=cds-WP_001267448.1;Parent=gene-AB11_RS23685;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AB11_RS23685;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 72429 73685 . - . ID=gene-AB11_RS23690;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AB11_RS23690;old_locus_tag=AB11_4579 NZ_JHDH01000169.1 Protein Homology CDS 72429 73685 . - 0 ID=cds-WP_000015837.1;Parent=gene-AB11_RS23690;Dbxref=GenBank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AB11_RS23690;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 73961 74254 . + . ID=gene-AB11_RS23695;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AB11_RS23695;old_locus_tag=AB11_4580 NZ_JHDH01000169.1 Protein Homology CDS 73961 74254 . + 0 ID=cds-WP_001026276.1;Parent=gene-AB11_RS23695;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AB11_RS23695;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 74298 75944 . + . ID=gene-AB11_RS23700;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AB11_RS23700;old_locus_tag=AB11_4581 NZ_JHDH01000169.1 Protein Homology CDS 74298 75944 . + 0 ID=cds-WP_000729117.1;Parent=gene-AB11_RS23700;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AB11_RS23700;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 76082 76435 . + . ID=gene-AB11_RS23705;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AB11_RS23705;old_locus_tag=AB11_4582 NZ_JHDH01000169.1 Protein Homology CDS 76082 76435 . + 0 ID=cds-WP_000558209.1;Parent=gene-AB11_RS23705;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AB11_RS23705;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 76628 77497 . - . ID=gene-AB11_RS23710;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AB11_RS23710;old_locus_tag=AB11_4583 NZ_JHDH01000169.1 Protein Homology CDS 76628 77497 . - 0 ID=cds-WP_032224114.1;Parent=gene-AB11_RS23710;Dbxref=GenBank:WP_032224114.1;Name=WP_032224114.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710010.2;locus_tag=AB11_RS23710;product=YjeJ family protein;protein_id=WP_032224114.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 77892 78920 . - . ID=gene-AB11_RS23715;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AB11_RS23715;old_locus_tag=AB11_4584 NZ_JHDH01000169.1 Protein Homology CDS 77892 78920 . - 0 ID=cds-WP_000940526.1;Parent=gene-AB11_RS23715;Dbxref=GenBank:WP_000940526.1;Name=WP_000940526.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=AB11_RS23715;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940526.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 78962 79528 . + . ID=gene-AB11_RS23720;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AB11_RS23720;old_locus_tag=AB11_4585 NZ_JHDH01000169.1 Protein Homology CDS 78962 79528 . + 0 ID=cds-WP_000257278.1;Parent=gene-AB11_RS23720;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AB11_RS23720;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 79580 79705 . + . ID=gene-AB11_RS23725;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AB11_RS23725;old_locus_tag=AB11_4586 NZ_JHDH01000169.1 Protein Homology CDS 79580 79705 . + 0 ID=cds-WP_000977757.1;Parent=gene-AB11_RS23725;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AB11_RS23725;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 79816 79962 . + . ID=gene-AB11_RS23730;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AB11_RS23730;old_locus_tag=AB11_4587 NZ_JHDH01000169.1 Protein Homology CDS 79816 79962 . + 0 ID=cds-WP_000239596.1;Parent=gene-AB11_RS23730;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AB11_RS23730;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 80144 80461 . + . ID=gene-AB11_RS23735;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AB11_RS23735;old_locus_tag=AB11_4588 NZ_JHDH01000169.1 Protein Homology CDS 80144 80461 . + 0 ID=cds-WP_000118482.1;Parent=gene-AB11_RS23735;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AB11_RS23735;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 80458 80991 . - . ID=gene-AB11_RS23740;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AB11_RS23740;old_locus_tag=AB11_4589 NZ_JHDH01000169.1 Protein Homology CDS 80458 80991 . - 0 ID=cds-WP_001238369.1;Parent=gene-AB11_RS23740;Dbxref=GenBank:WP_001238369.1;Name=WP_001238369.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AB11_RS23740;product=lipocalin Blc;protein_id=WP_001238369.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 81080 82213 . - . ID=gene-AB11_RS23745;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AB11_RS23745;old_locus_tag=AB11_4590 NZ_JHDH01000169.1 Protein Homology CDS 81080 82213 . - 0 ID=cds-WP_001300820.1;Parent=gene-AB11_RS23745;Dbxref=GenBank:WP_001300820.1;Name=WP_001300820.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AB11_RS23745;product=BlaEC family class C beta-lactamase;protein_id=WP_001300820.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 82276 82635 . - . ID=gene-AB11_RS23750;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AB11_RS23750;old_locus_tag=AB11_4591 NZ_JHDH01000169.1 Protein Homology CDS 82276 82635 . - 0 ID=cds-WP_000609663.1;Parent=gene-AB11_RS23750;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AB11_RS23750;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 82646 83041 . - . ID=gene-AB11_RS23755;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AB11_RS23755;old_locus_tag=AB11_4592 NZ_JHDH01000169.1 Protein Homology CDS 82646 83041 . - 0 ID=cds-WP_000208757.1;Parent=gene-AB11_RS23755;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AB11_RS23755;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 83052 83786 . - . ID=gene-AB11_RS23760;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AB11_RS23760;old_locus_tag=AB11_4593 NZ_JHDH01000169.1 Protein Homology CDS 83052 83786 . - 0 ID=cds-WP_000829498.1;Parent=gene-AB11_RS23760;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AB11_RS23760;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 83779 85587 . - . ID=gene-AB11_RS23765;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AB11_RS23765;old_locus_tag=AB11_4594 NZ_JHDH01000169.1 Protein Homology CDS 83779 85587 . - 0 ID=cds-WP_001192984.1;Parent=gene-AB11_RS23765;Dbxref=GenBank:WP_001192984.1;Name=WP_001192984.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AB11_RS23765;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192984.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 85912 86889 . + . ID=gene-AB11_RS23770;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AB11_RS23770;old_locus_tag=AB11_4595 NZ_JHDH01000169.1 Protein Homology CDS 85912 86889 . + 0 ID=cds-WP_000004771.1;Parent=gene-AB11_RS23770;Dbxref=GenBank:WP_000004771.1;Name=WP_000004771.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AB11_RS23770;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 87108 88610 . + . ID=gene-AB11_RS23775;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AB11_RS23775;old_locus_tag=AB11_4596 NZ_JHDH01000169.1 Protein Homology CDS 87108 88610 . + 0 ID=cds-WP_001336293.1;Parent=gene-AB11_RS23775;Dbxref=GenBank:WP_001336293.1;Name=WP_001336293.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AB11_RS23775;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001336293.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 88662 88976 . + . ID=gene-AB11_RS23780;Name=yjeN;gbkey=Gene;gene=yjeN;gene_biotype=protein_coding;locus_tag=AB11_RS23780;old_locus_tag=AB11_4597 NZ_JHDH01000169.1 Protein Homology CDS 88662 88976 . + 0 ID=cds-WP_000342867.1;Parent=gene-AB11_RS23780;Dbxref=GenBank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;gene=yjeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418581.1;locus_tag=AB11_RS23780;product=protein YjeN;protein_id=WP_000342867.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 88973 89287 . + . ID=gene-AB11_RS23785;Name=yjeO;gbkey=Gene;gene=yjeO;gene_biotype=protein_coding;locus_tag=AB11_RS23785;old_locus_tag=AB11_4598 NZ_JHDH01000169.1 Protein Homology CDS 88973 89287 . + 0 ID=cds-WP_001276180.1;Parent=gene-AB11_RS23785;Dbxref=GenBank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;gene=yjeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418582.1;locus_tag=AB11_RS23785;product=YjeO family protein;protein_id=WP_001276180.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 89316 92639 . - . ID=gene-AB11_RS23790;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AB11_RS23790;old_locus_tag=AB11_4599 NZ_JHDH01000169.1 Protein Homology CDS 89316 92639 . - 0 ID=cds-WP_001236847.1;Parent=gene-AB11_RS23790;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AB11_RS23790;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 92661 93629 . - . ID=gene-AB11_RS23795;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB11_RS23795;old_locus_tag=AB11_4600 NZ_JHDH01000169.1 Protein Homology CDS 92661 93629 . - 0 ID=cds-WP_000934920.1;Parent=gene-AB11_RS23795;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AB11_RS23795;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 93726 94778 . - . ID=gene-AB11_RS23800;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB11_RS23800;old_locus_tag=AB11_4601 NZ_JHDH01000169.1 Protein Homology CDS 93726 94778 . - 0 ID=cds-WP_000041970.1-2;Parent=gene-AB11_RS23800;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB11_RS23800;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 94873 95418 . + . ID=gene-AB11_RS23805;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB11_RS23805;old_locus_tag=AB11_4602 NZ_JHDH01000169.1 Protein Homology CDS 94873 95418 . + 0 ID=cds-WP_001295188.1-2;Parent=gene-AB11_RS23805;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB11_RS23805;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDH01000169.1 RefSeq gene 95629 95704 . + . ID=gene-AB11_RS23810;Name=AB11_RS23810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS23810;old_locus_tag=AB11_4603 NZ_JHDH01000169.1 tRNAscan-SE tRNA 95629 95704 . + . ID=rna-AB11_RS23810;Parent=gene-AB11_RS23810;anticodon=(pos:95662..95664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23810;product=tRNA-Gly NZ_JHDH01000169.1 tRNAscan-SE exon 95629 95704 . + . ID=exon-AB11_RS23810-1;Parent=rna-AB11_RS23810;anticodon=(pos:95662..95664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23810;product=tRNA-Gly ##sequence-region NZ_JHDH01000170.1 1 38937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000170.1 RefSeq region 1 38937 . + . ID=NZ_JHDH01000170.1:1..38937;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000170.1 RefSeq gene 1 960 . - . ID=gene-AB11_RS23815;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB11_RS23815;old_locus_tag=AB11_4604;partial=true;start_range=.,1 NZ_JHDH01000170.1 Protein Homology CDS 1 960 . - 0 ID=cds-WP_032205677.1;Parent=gene-AB11_RS23815;Dbxref=GenBank:WP_032205677.1;Name=WP_032205677.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB11_RS23815;partial=true;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_032205677.1;start_range=.,1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 1055 1600 . + . ID=gene-AB11_RS23820;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB11_RS23820;old_locus_tag=AB11_4605 NZ_JHDH01000170.1 Protein Homology CDS 1055 1600 . + 0 ID=cds-WP_001295188.1-3;Parent=gene-AB11_RS23820;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB11_RS23820;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 1811 1886 . + . ID=gene-AB11_RS23825;Name=AB11_RS23825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS23825;old_locus_tag=AB11_4606 NZ_JHDH01000170.1 tRNAscan-SE tRNA 1811 1886 . + . ID=rna-AB11_RS23825;Parent=gene-AB11_RS23825;anticodon=(pos:1844..1846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23825;product=tRNA-Gly NZ_JHDH01000170.1 tRNAscan-SE exon 1811 1886 . + . ID=exon-AB11_RS23825-1;Parent=rna-AB11_RS23825;anticodon=(pos:1844..1846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23825;product=tRNA-Gly NZ_JHDH01000170.1 RefSeq gene 1922 1997 . + . ID=gene-AB11_RS23830;Name=AB11_RS23830;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS23830;old_locus_tag=AB11_4607 NZ_JHDH01000170.1 tRNAscan-SE tRNA 1922 1997 . + . ID=rna-AB11_RS23830;Parent=gene-AB11_RS23830;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23830;product=tRNA-Gly NZ_JHDH01000170.1 tRNAscan-SE exon 1922 1997 . + . ID=exon-AB11_RS23830-1;Parent=rna-AB11_RS23830;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS23830;product=tRNA-Gly NZ_JHDH01000170.1 RefSeq gene 2231 2284 . + . ID=gene-AB11_RS23835;Name=AB11_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23835 NZ_JHDH01000170.1 Protein Homology CDS 2231 2284 . + 0 ID=cds-WP_010723271.1-3;Parent=gene-AB11_RS23835;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB11_RS23835;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 2267 3406 . - . ID=gene-AB11_RS23840;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB11_RS23840;old_locus_tag=AB11_4608 NZ_JHDH01000170.1 Protein Homology CDS 2267 3406 . - 0 ID=cds-WP_001294219.1-3;Parent=gene-AB11_RS23840;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB11_RS23840;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 3405 4952 . + . ID=gene-AB11_RS23845;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AB11_RS23845;old_locus_tag=AB11_4609 NZ_JHDH01000170.1 Protein Homology CDS 3405 4952 . + 0 ID=cds-WP_001351889.1;Parent=gene-AB11_RS23845;Dbxref=GenBank:WP_001351889.1;Name=WP_001351889.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AB11_RS23845;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001351889.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 4924 5385 . + . ID=gene-AB11_RS23850;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AB11_RS23850;old_locus_tag=AB11_4610 NZ_JHDH01000170.1 Protein Homology CDS 4924 5385 . + 0 ID=cds-WP_000981977.1;Parent=gene-AB11_RS23850;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AB11_RS23850;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 5404 6741 . + . ID=gene-AB11_RS23855;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AB11_RS23855;old_locus_tag=AB11_4611 NZ_JHDH01000170.1 Protein Homology CDS 5404 6741 . + 0 ID=cds-WP_000640382.1;Parent=gene-AB11_RS23855;Dbxref=GenBank:WP_000640382.1;Name=WP_000640382.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AB11_RS23855;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640382.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 6751 8598 . + . ID=gene-AB11_RS23860;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AB11_RS23860;old_locus_tag=AB11_4612 NZ_JHDH01000170.1 Protein Homology CDS 6751 8598 . + 0 ID=cds-WP_001122505.1;Parent=gene-AB11_RS23860;Dbxref=GenBank:WP_001122505.1;Name=WP_001122505.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AB11_RS23860;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122505.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 8591 9541 . + . ID=gene-AB11_RS23865;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AB11_RS23865;old_locus_tag=AB11_4613 NZ_JHDH01000170.1 Protein Homology CDS 8591 9541 . + 0 ID=cds-WP_001280345.1;Parent=gene-AB11_RS23865;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AB11_RS23865;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 9627 9935 . + . ID=gene-AB11_RS23870;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AB11_RS23870;old_locus_tag=AB11_4614 NZ_JHDH01000170.1 Protein Homology CDS 9627 9935 . + 0 ID=cds-WP_001051883.1;Parent=gene-AB11_RS23870;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AB11_RS23870;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 10011 11291 . + . ID=gene-AB11_RS23875;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AB11_RS23875;old_locus_tag=AB11_4615 NZ_JHDH01000170.1 Protein Homology CDS 10011 11291 . + 0 ID=cds-WP_000460360.1;Parent=gene-AB11_RS23875;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AB11_RS23875;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 11377 12636 . + . ID=gene-AB11_RS23880;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AB11_RS23880;old_locus_tag=AB11_4616 NZ_JHDH01000170.1 Protein Homology CDS 11377 12636 . + 0 ID=cds-WP_000312488.1;Parent=gene-AB11_RS23880;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AB11_RS23880;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 12639 13643 . + . ID=gene-AB11_RS23885;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AB11_RS23885;old_locus_tag=AB11_4617 NZ_JHDH01000170.1 Protein Homology CDS 12639 13643 . + 0 ID=cds-WP_001232412.1;Parent=gene-AB11_RS23885;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AB11_RS23885;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 13725 13922 . + . ID=gene-AB11_RS23890;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AB11_RS23890;old_locus_tag=AB11_4618 NZ_JHDH01000170.1 Protein Homology CDS 13725 13922 . + 0 ID=cds-WP_001089295.1;Parent=gene-AB11_RS23890;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AB11_RS23890;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 14026 15324 . + . ID=gene-AB11_RS23895;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AB11_RS23895;old_locus_tag=AB11_4619 NZ_JHDH01000170.1 Protein Homology CDS 14026 15324 . + 0 ID=cds-WP_000527955.1;Parent=gene-AB11_RS23895;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AB11_RS23895;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 15529 15954 . + . ID=gene-AB11_RS23900;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AB11_RS23900;old_locus_tag=AB11_4620 NZ_JHDH01000170.1 Protein Homology CDS 15529 15954 . + 0 ID=cds-WP_001177639.1;Parent=gene-AB11_RS23900;Dbxref=GenBank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AB11_RS23900;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 15993 18434 . + . ID=gene-AB11_RS23905;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AB11_RS23905;old_locus_tag=AB11_4621 NZ_JHDH01000170.1 Protein Homology CDS 15993 18434 . + 0 ID=cds-WP_000076332.1;Parent=gene-AB11_RS23905;Dbxref=GenBank:WP_000076332.1;Name=WP_000076332.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AB11_RS23905;product=ribonuclease R;protein_id=WP_000076332.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 18614 19345 . + . ID=gene-AB11_RS23910;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AB11_RS23910;old_locus_tag=AB11_4622 NZ_JHDH01000170.1 Protein Homology CDS 18614 19345 . + 0 ID=cds-WP_001293282.1;Parent=gene-AB11_RS23910;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AB11_RS23910;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 19472 19873 . + . ID=gene-AB11_RS23915;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AB11_RS23915;old_locus_tag=AB11_4623 NZ_JHDH01000170.1 Protein Homology CDS 19472 19873 . + 0 ID=cds-WP_000220128.1;Parent=gene-AB11_RS23915;Dbxref=GenBank:WP_000220128.1;Name=WP_000220128.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AB11_RS23915;product=YjfI family protein;protein_id=WP_000220128.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 19892 20590 . + . ID=gene-AB11_RS23920;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AB11_RS23920;old_locus_tag=AB11_4624 NZ_JHDH01000170.1 Protein Homology CDS 19892 20590 . + 0 ID=cds-WP_000511955.1;Parent=gene-AB11_RS23920;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AB11_RS23920;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 20641 21300 . + . ID=gene-AB11_RS23925;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AB11_RS23925;old_locus_tag=AB11_4625 NZ_JHDH01000170.1 Protein Homology CDS 20641 21300 . + 0 ID=cds-WP_001510634.1;Parent=gene-AB11_RS23925;Dbxref=GenBank:WP_001510634.1;Name=WP_001510634.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AB11_RS23925;product=YjfK family protein;protein_id=WP_001510634.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 21318 21716 . + . ID=gene-AB11_RS23930;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AB11_RS23930;old_locus_tag=AB11_4626 NZ_JHDH01000170.1 Protein Homology CDS 21318 21716 . + 0 ID=cds-WP_000547760.1;Parent=gene-AB11_RS23930;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AB11_RS23930;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 21726 22364 . + . ID=gene-AB11_RS23935;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AB11_RS23935;old_locus_tag=AB11_4627 NZ_JHDH01000170.1 Protein Homology CDS 21726 22364 . + 0 ID=cds-WP_000101685.1;Parent=gene-AB11_RS23935;Dbxref=GenBank:WP_000101685.1;Name=WP_000101685.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418606.1;locus_tag=AB11_RS23935;product=DUF1190 domain-containing protein;protein_id=WP_000101685.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 22367 23530 . + . ID=gene-AB11_RS23940;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AB11_RS23940;old_locus_tag=AB11_4628 NZ_JHDH01000170.1 Protein Homology CDS 22367 23530 . + 0 ID=cds-WP_000943964.1;Parent=gene-AB11_RS23940;Dbxref=GenBank:WP_000943964.1;Name=WP_000943964.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AB11_RS23940;product=glutathionylspermidine synthase family protein;protein_id=WP_000943964.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 23614 25239 . + . ID=gene-AB11_RS23945;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AB11_RS23945;old_locus_tag=AB11_4629 NZ_JHDH01000170.1 Protein Homology CDS 23614 25239 . + 0 ID=cds-WP_001295190.1;Parent=gene-AB11_RS23945;Dbxref=GenBank:WP_001295190.1;Name=WP_001295190.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AB11_RS23945;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001295190.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 25356 25631 . - . ID=gene-AB11_RS23950;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AB11_RS23950;old_locus_tag=AB11_4630 NZ_JHDH01000170.1 Protein Homology CDS 25356 25631 . - 0 ID=cds-WP_000811566.1;Parent=gene-AB11_RS23950;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AB11_RS23950;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 25780 26109 . - . ID=gene-AB11_RS23955;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AB11_RS23955;old_locus_tag=AB11_4631 NZ_JHDH01000170.1 Protein Homology CDS 25780 26109 . - 0 ID=cds-WP_000254633.1;Parent=gene-AB11_RS23955;Dbxref=GenBank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AB11_RS23955;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 26291 27040 . + . ID=gene-AB11_RS23960;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AB11_RS23960;old_locus_tag=AB11_4632 NZ_JHDH01000170.1 Protein Homology CDS 26291 27040 . + 0 ID=cds-WP_000569679.1;Parent=gene-AB11_RS23960;Dbxref=GenBank:WP_000569679.1;Name=WP_000569679.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313193.1;locus_tag=AB11_RS23960;product=esterase;protein_id=WP_000569679.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 27037 27792 . - . ID=gene-AB11_RS23965;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AB11_RS23965;old_locus_tag=AB11_4633 NZ_JHDH01000170.1 Protein Homology CDS 27037 27792 . - 0 ID=cds-WP_000133631.1;Parent=gene-AB11_RS23965;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AB11_RS23965;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 27900 28964 . - . ID=gene-AB11_RS23970;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AB11_RS23970;old_locus_tag=AB11_4634 NZ_JHDH01000170.1 Protein Homology CDS 27900 28964 . - 0 ID=cds-WP_001301370.1;Parent=gene-AB11_RS23970;Dbxref=GenBank:WP_001301370.1;Name=WP_001301370.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AB11_RS23970;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 29319 30716 . + . ID=gene-AB11_RS23975;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AB11_RS23975;old_locus_tag=AB11_4635 NZ_JHDH01000170.1 Protein Homology CDS 29319 30716 . + 0 ID=cds-WP_001351893.1;Parent=gene-AB11_RS23975;Dbxref=GenBank:WP_001351893.1;Name=WP_001351893.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AB11_RS23975;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001351893.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 30732 31037 . + . ID=gene-AB11_RS23980;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AB11_RS23980;old_locus_tag=AB11_4636 NZ_JHDH01000170.1 Protein Homology CDS 30732 31037 . + 0 ID=cds-WP_000218362.1;Parent=gene-AB11_RS23980;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AB11_RS23980;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 31047 31511 . + . ID=gene-AB11_RS23985;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AB11_RS23985;old_locus_tag=AB11_4637 NZ_JHDH01000170.1 Protein Homology CDS 31047 31511 . + 0 ID=cds-WP_000776505.1;Parent=gene-AB11_RS23985;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AB11_RS23985;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 31525 32175 . + . ID=gene-AB11_RS23990;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB11_RS23990;old_locus_tag=AB11_4638 NZ_JHDH01000170.1 Protein Homology CDS 31525 32175 . + 0 ID=cds-WP_000056760.1;Parent=gene-AB11_RS23990;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AB11_RS23990;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 32185 32388 . + . ID=gene-AB11_RS23995;Name=AB11_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS23995 NZ_JHDH01000170.1 Protein Homology CDS 32185 32388 . + 0 ID=cds-WP_016234185.1;Parent=gene-AB11_RS23995;Dbxref=GenBank:WP_016234185.1;Name=WP_016234185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949487.1;locus_tag=AB11_RS23995;product=hypothetical protein;protein_id=WP_016234185.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 32447 33295 . - . ID=gene-AB11_RS24000;Name=AB11_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24000;old_locus_tag=AB11_4639 NZ_JHDH01000170.1 Protein Homology CDS 32447 33295 . - 0 ID=cds-WP_032198269.1;Parent=gene-AB11_RS24000;Dbxref=GenBank:WP_032198269.1;Name=WP_032198269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234186.1;locus_tag=AB11_RS24000;product=DUF4942 domain-containing protein;protein_id=WP_032198269.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 33380 33577 . - . ID=gene-AB11_RS24005;Name=AB11_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24005;old_locus_tag=AB11_4640 NZ_JHDH01000170.1 Protein Homology CDS 33380 33577 . - 0 ID=cds-WP_000839250.1;Parent=gene-AB11_RS24005;Dbxref=GenBank:WP_000839250.1;Name=WP_000839250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AB11_RS24005;product=DUF957 domain-containing protein;protein_id=WP_000839250.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 33594 34082 . - . ID=gene-AB11_RS24010;Name=AB11_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24010;old_locus_tag=AB11_4641 NZ_JHDH01000170.1 Protein Homology CDS 33594 34082 . - 0 ID=cds-WP_000761698.1;Parent=gene-AB11_RS24010;Dbxref=GenBank:WP_000761698.1;Name=WP_000761698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=AB11_RS24010;product=DUF5983 family protein;protein_id=WP_000761698.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 34079 34456 . - . ID=gene-AB11_RS24015;Name=AB11_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24015;old_locus_tag=AB11_4642 NZ_JHDH01000170.1 Protein Homology CDS 34079 34456 . - 0 ID=cds-WP_032198290.1;Parent=gene-AB11_RS24015;Dbxref=GenBank:WP_032198290.1;Name=WP_032198290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854828.1;locus_tag=AB11_RS24015;product=TA system toxin CbtA family protein;protein_id=WP_032198290.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 34546 34914 . - . ID=gene-AB11_RS24020;Name=AB11_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24020;old_locus_tag=AB11_4643 NZ_JHDH01000170.1 Protein Homology CDS 34546 34914 . - 0 ID=cds-WP_001285402.1;Parent=gene-AB11_RS24020;Dbxref=GenBank:WP_001285402.1;Name=WP_001285402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012816826.1;locus_tag=AB11_RS24020;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001285402.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 35077 35298 . - . ID=gene-AB11_RS24025;Name=AB11_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24025;old_locus_tag=AB11_4645 NZ_JHDH01000170.1 Protein Homology CDS 35077 35298 . - 0 ID=cds-WP_000692323.1-2;Parent=gene-AB11_RS24025;Dbxref=GenBank:WP_000692323.1;Name=WP_000692323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310831.1;locus_tag=AB11_RS24025;product=DUF987 domain-containing protein;protein_id=WP_000692323.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 35367 35843 . - . ID=gene-AB11_RS24030;Name=AB11_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24030;old_locus_tag=AB11_4646 NZ_JHDH01000170.1 Protein Homology CDS 35367 35843 . - 0 ID=cds-WP_001747787.1;Parent=gene-AB11_RS24030;Dbxref=GenBank:WP_001747787.1;Name=WP_001747787.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB11_RS24030;product=JAB domain-containing protein;protein_id=WP_001747787.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 35859 36338 . - . ID=gene-AB11_RS24035;Name=AB11_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24035;old_locus_tag=AB11_4647 NZ_JHDH01000170.1 Protein Homology CDS 35859 36338 . - 0 ID=cds-WP_028131447.1;Parent=gene-AB11_RS24035;Dbxref=GenBank:WP_028131447.1;Name=WP_028131447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB11_RS24035;product=antirestriction protein;protein_id=WP_028131447.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 36601 37419 . - . ID=gene-AB11_RS24040;Name=AB11_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24040;old_locus_tag=AB11_4648 NZ_JHDH01000170.1 Protein Homology CDS 36601 37419 . - 0 ID=cds-WP_001573260.1;Parent=gene-AB11_RS24040;Dbxref=GenBank:WP_001573260.1;Name=WP_001573260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AB11_RS24040;product=DUF932 domain-containing protein;protein_id=WP_001573260.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 37588 37743 . - . ID=gene-AB11_RS24045;Name=AB11_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24045;old_locus_tag=AB11_4649 NZ_JHDH01000170.1 Protein Homology CDS 37588 37743 . - 0 ID=cds-WP_042960768.1;Parent=gene-AB11_RS24045;Dbxref=GenBank:WP_042960768.1;Name=WP_042960768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017787.6;locus_tag=AB11_RS24045;product=DUF905 family protein;protein_id=WP_042960768.1;transl_table=11 NZ_JHDH01000170.1 RefSeq gene 37822 38277 . - . ID=gene-AB11_RS24050;Name=AB11_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24050;old_locus_tag=AB11_4650 NZ_JHDH01000170.1 Protein Homology CDS 37822 38277 . - 0 ID=cds-WP_000581504.1;Parent=gene-AB11_RS24050;Dbxref=GenBank:WP_000581504.1;Name=WP_000581504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708767.1;locus_tag=AB11_RS24050;product=IrmA family protein;protein_id=WP_000581504.1;transl_table=11 NZ_JHDH01000170.1 RefSeq pseudogene 38353 38937 . - . ID=gene-AB11_RS24055;Name=AB11_RS24055;end_range=38937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24055;old_locus_tag=AB11_4651;partial=true;pseudo=true NZ_JHDH01000170.1 Protein Homology CDS 38353 38937 . - 0 ID=cds-AB11_RS24055;Parent=gene-AB11_RS24055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=38937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708766.2;locus_tag=AB11_RS24055;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000171.1 1 137792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000171.1 RefSeq region 1 137792 . + . ID=NZ_JHDH01000171.1:1..137792;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000171.1 RefSeq gene 1 458 . + . ID=gene-AB11_RS24060;Name=AB11_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24060;old_locus_tag=AB11_4652;partial=true;start_range=.,1 NZ_JHDH01000171.1 Protein Homology CDS 1 458 . + 2 ID=cds-WP_032224128.1;Parent=gene-AB11_RS24060;Dbxref=GenBank:WP_032224128.1;Name=WP_032224128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB11_RS24060;partial=true;product=IS3 family transposase;protein_id=WP_032224128.1;start_range=.,1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 471 545 . - . ID=gene-AB11_RS25645;Name=AB11_RS25645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25645;partial=true;pseudo=true;start_range=.,471 NZ_JHDH01000171.1 Protein Homology CDS 471 545 . - 0 ID=cds-AB11_RS25645;Parent=gene-AB11_RS25645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309391.1;locus_tag=AB11_RS25645;partial=true;product=hypothetical protein;pseudo=true;start_range=.,471;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 873 1061 . - . ID=gene-AB11_RS24070;Name=AB11_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24070 NZ_JHDH01000171.1 GeneMarkS-2+ CDS 873 1061 . - 0 ID=cds-WP_168728585.1;Parent=gene-AB11_RS24070;Dbxref=GenBank:WP_168728585.1;Name=WP_168728585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB11_RS24070;product=hypothetical protein;protein_id=WP_168728585.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 1359 1597 . - . ID=gene-AB11_RS25650;Name=AB11_RS25650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25650;partial=true;pseudo=true;start_range=.,1359 NZ_JHDH01000171.1 Protein Homology CDS 1359 1597 . - 0 ID=cds-AB11_RS25650;Parent=gene-AB11_RS25650;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088287.1;locus_tag=AB11_RS25650;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;start_range=.,1359;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 1866 2912 . - . ID=gene-AB11_RS24075;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=AB11_RS24075;old_locus_tag=AB11_4655 NZ_JHDH01000171.1 Protein Homology CDS 1866 2912 . - 0 ID=cds-WP_032198273.1;Parent=gene-AB11_RS24075;Dbxref=GenBank:WP_032198273.1;Name=WP_032198273.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308440.2;locus_tag=AB11_RS24075;product=ferric ABC transporter ATP-binding protein;protein_id=WP_032198273.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 2924 5002 . - . ID=gene-AB11_RS24080;Name=AB11_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24080;old_locus_tag=AB11_4656 NZ_JHDH01000171.1 Protein Homology CDS 2924 5002 . - 0 ID=cds-WP_016234044.1;Parent=gene-AB11_RS24080;Dbxref=GenBank:WP_016234044.1;Name=WP_016234044.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308441.1;locus_tag=AB11_RS24080;product=ABC transporter permease;protein_id=WP_016234044.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 5071 6102 . - . ID=gene-AB11_RS24085;Name=AB11_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24085;old_locus_tag=AB11_4657 NZ_JHDH01000171.1 Protein Homology CDS 5071 6102 . - 0 ID=cds-WP_000783757.1;Parent=gene-AB11_RS24085;Dbxref=GenBank:WP_000783757.1;Name=WP_000783757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308442.1;locus_tag=AB11_RS24085;product=ABC transporter substrate-binding protein;protein_id=WP_000783757.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 6099 7415 . - . ID=gene-AB11_RS24090;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AB11_RS24090;old_locus_tag=AB11_4658 NZ_JHDH01000171.1 Protein Homology CDS 6099 7415 . - 0 ID=cds-WP_077699310.1;Parent=gene-AB11_RS24090;Dbxref=GenBank:WP_077699310.1;Name=WP_077699310.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312597.1;locus_tag=AB11_RS24090;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_077699310.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 7488 9029 . - . ID=gene-AB11_RS24095;Name=AB11_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24095;old_locus_tag=AB11_4659 NZ_JHDH01000171.1 Protein Homology CDS 7488 9029 . - 0 ID=cds-WP_000089291.1;Parent=gene-AB11_RS24095;Dbxref=GenBank:WP_000089291.1;Name=WP_000089291.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308444.1;locus_tag=AB11_RS24095;product=MASE1 domain-containing sensor histidine kinase;protein_id=WP_000089291.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 9029 9658 . - . ID=gene-AB11_RS24100;Name=AB11_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24100;old_locus_tag=AB11_4660 NZ_JHDH01000171.1 Protein Homology CDS 9029 9658 . - 0 ID=cds-WP_000621911.1;Parent=gene-AB11_RS24100;Dbxref=GenBank:WP_000621911.1;Name=WP_000621911.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308445.1;locus_tag=AB11_RS24100;product=response regulator transcription factor;protein_id=WP_000621911.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 9941 11122 . - . ID=gene-AB11_RS24105;Name=AB11_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24105;old_locus_tag=AB11_4661 NZ_JHDH01000171.1 Protein Homology CDS 9941 11122 . - 0 ID=cds-WP_001131670.1;Parent=gene-AB11_RS24105;Dbxref=GenBank:WP_001131670.1;Name=WP_001131670.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131670.1;locus_tag=AB11_RS24105;product=tyrosine-type recombinase/integrase;protein_id=WP_001131670.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 11297 12112 . + . ID=gene-AB11_RS24110;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AB11_RS24110;old_locus_tag=AB11_4662 NZ_JHDH01000171.1 Protein Homology CDS 11297 12112 . + 0 ID=cds-WP_050436715.1;Parent=gene-AB11_RS24110;Dbxref=GenBank:WP_050436715.1;Name=WP_050436715.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692974.1;locus_tag=AB11_RS24110;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_050436715.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 12112 12798 . + . ID=gene-AB11_RS24115;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AB11_RS24115;old_locus_tag=AB11_4663 NZ_JHDH01000171.1 Protein Homology CDS 12112 12798 . + 0 ID=cds-WP_001170848.1;Parent=gene-AB11_RS24115;Dbxref=GenBank:WP_001170848.1;Name=WP_001170848.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418619.1;locus_tag=AB11_RS24115;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170848.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 12927 13202 . - . ID=gene-AB11_RS24120;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AB11_RS24120;old_locus_tag=AB11_4664 NZ_JHDH01000171.1 Protein Homology CDS 12927 13202 . - 0 ID=cds-WP_000492914.1;Parent=gene-AB11_RS24120;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AB11_RS24120;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 13529 13924 . + . ID=gene-AB11_RS24125;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AB11_RS24125;old_locus_tag=AB11_4665 NZ_JHDH01000171.1 Protein Homology CDS 13529 13924 . + 0 ID=cds-WP_001216676.1;Parent=gene-AB11_RS24125;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AB11_RS24125;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 13931 14245 . + . ID=gene-AB11_RS24130;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AB11_RS24130 NZ_JHDH01000171.1 Protein Homology CDS 13931 14245 . + 0 ID=cds-WP_001296681.1;Parent=gene-AB11_RS24130;Dbxref=GenBank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AB11_RS24130;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 14250 14477 . + . ID=gene-AB11_RS24135;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AB11_RS24135;old_locus_tag=AB11_4666 NZ_JHDH01000171.1 Protein Homology CDS 14250 14477 . + 0 ID=cds-WP_000135199.1;Parent=gene-AB11_RS24135;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AB11_RS24135;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 14519 14968 . + . ID=gene-AB11_RS24140;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AB11_RS24140;old_locus_tag=AB11_4667 NZ_JHDH01000171.1 Protein Homology CDS 14519 14968 . + 0 ID=cds-WP_001196062.1;Parent=gene-AB11_RS24140;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AB11_RS24140;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 15070 16347 . - . ID=gene-AB11_RS24145;Name=AB11_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24145;old_locus_tag=AB11_4668 NZ_JHDH01000171.1 Protein Homology CDS 15070 16347 . - 0 ID=cds-WP_001033615.1;Parent=gene-AB11_RS24145;Dbxref=GenBank:WP_001033615.1;Name=WP_001033615.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033602.1;locus_tag=AB11_RS24145;product=MFS transporter;protein_id=WP_001033615.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 16440 18511 . - . ID=gene-AB11_RS24150;Name=AB11_RS24150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24150;old_locus_tag=AB11_4669;pseudo=true NZ_JHDH01000171.1 Protein Homology CDS 16440 18511 . - 0 ID=cds-AB11_RS24150;Parent=gene-AB11_RS24150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591423.1;locus_tag=AB11_RS24150;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 18508 20049 . - . ID=gene-AB11_RS24155;Name=AB11_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24155;old_locus_tag=AB11_4670 NZ_JHDH01000171.1 Protein Homology CDS 18508 20049 . - 0 ID=cds-WP_001226947.1;Parent=gene-AB11_RS24155;Dbxref=GenBank:WP_001226947.1;Name=WP_001226947.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AB11_RS24155;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001226947.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 20059 20835 . - . ID=gene-AB11_RS24160;Name=AB11_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24160;old_locus_tag=AB11_4671 NZ_JHDH01000171.1 Protein Homology CDS 20059 20835 . - 0 ID=cds-WP_001283546.1;Parent=gene-AB11_RS24160;Dbxref=GenBank:WP_001283546.1;Name=WP_001283546.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AB11_RS24160;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283546.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 20845 21687 . - . ID=gene-AB11_RS24165;Name=AB11_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24165;old_locus_tag=AB11_4672 NZ_JHDH01000171.1 Protein Homology CDS 20845 21687 . - 0 ID=cds-WP_001205235.1;Parent=gene-AB11_RS24165;Dbxref=GenBank:WP_001205235.1;Name=WP_001205235.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AB11_RS24165;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_001205235.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 21697 22488 . - . ID=gene-AB11_RS24170;Name=AB11_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24170;old_locus_tag=AB11_4673 NZ_JHDH01000171.1 Protein Homology CDS 21697 22488 . - 0 ID=cds-WP_032224137.1;Parent=gene-AB11_RS24170;Dbxref=GenBank:WP_032224137.1;Name=WP_032224137.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AB11_RS24170;product=3-ketoacyl-ACP reductase;protein_id=WP_032224137.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 22701 23348 . + . ID=gene-AB11_RS24175;Name=AB11_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24175;old_locus_tag=AB11_4674 NZ_JHDH01000171.1 Protein Homology CDS 22701 23348 . + 0 ID=cds-WP_001318432.1;Parent=gene-AB11_RS24175;Dbxref=GenBank:WP_001318432.1;Name=WP_001318432.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AB11_RS24175;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001318432.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 23332 23970 . - . ID=gene-AB11_RS24180;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AB11_RS24180;old_locus_tag=AB11_4675 NZ_JHDH01000171.1 Protein Homology CDS 23332 23970 . - 0 ID=cds-WP_001119458.1;Parent=gene-AB11_RS24180;Dbxref=GenBank:WP_001119458.1;Name=WP_001119458.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AB11_RS24180;product=cell division protein YtfB;protein_id=WP_001119458.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 24189 24809 . + . ID=gene-AB11_RS24185;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AB11_RS24185;old_locus_tag=AB11_4676 NZ_JHDH01000171.1 Protein Homology CDS 24189 24809 . + 0 ID=cds-WP_000211237.1;Parent=gene-AB11_RS24185;Dbxref=GenBank:WP_000211237.1;Name=WP_000211237.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AB11_RS24185;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211237.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 25118 26530 . + . ID=gene-AB11_RS24190;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AB11_RS24190;old_locus_tag=AB11_4677 NZ_JHDH01000171.1 Protein Homology CDS 25118 26530 . + 0 ID=cds-WP_000228346.1;Parent=gene-AB11_RS24190;Dbxref=GenBank:WP_000228346.1;Name=WP_000228346.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AB11_RS24190;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 26575 27237 . - . ID=gene-AB11_RS24195;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AB11_RS24195;old_locus_tag=AB11_4678 NZ_JHDH01000171.1 Protein Homology CDS 26575 27237 . - 0 ID=cds-WP_000331456.1;Parent=gene-AB11_RS24195;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AB11_RS24195;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 27345 28310 . - . ID=gene-AB11_RS24200;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AB11_RS24200;old_locus_tag=AB11_4679 NZ_JHDH01000171.1 Protein Homology CDS 27345 28310 . - 0 ID=cds-WP_001295194.1;Parent=gene-AB11_RS24200;Dbxref=GenBank:WP_001295194.1;Name=WP_001295194.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AB11_RS24200;product=DMT family transporter;protein_id=WP_001295194.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 28419 29279 . - . ID=gene-AB11_RS24205;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AB11_RS24205;old_locus_tag=AB11_4680 NZ_JHDH01000171.1 Protein Homology CDS 28419 29279 . - 0 ID=cds-WP_000560597.1;Parent=gene-AB11_RS24205;Dbxref=GenBank:WP_000560597.1;Name=WP_000560597.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491469.1;locus_tag=AB11_RS24205;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560597.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 29368 29748 . + . ID=gene-AB11_RS24210;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AB11_RS24210;old_locus_tag=AB11_4681 NZ_JHDH01000171.1 Protein Homology CDS 29368 29748 . + 0 ID=cds-WP_000084622.1;Parent=gene-AB11_RS24210;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AB11_RS24210;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 29871 31814 . - . ID=gene-AB11_RS24215;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AB11_RS24215;old_locus_tag=AB11_4682 NZ_JHDH01000171.1 Protein Homology CDS 29871 31814 . - 0 ID=cds-WP_032224139.1;Parent=gene-AB11_RS24215;Dbxref=GenBank:WP_032224139.1;Name=WP_032224139.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AB11_RS24215;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_032224139.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 32004 32744 . + . ID=gene-AB11_RS24220;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AB11_RS24220;old_locus_tag=AB11_4683 NZ_JHDH01000171.1 Protein Homology CDS 32004 32744 . + 0 ID=cds-WP_000886900.1;Parent=gene-AB11_RS24220;Dbxref=GenBank:WP_000886900.1;Name=WP_000886900.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AB11_RS24220;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886900.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 32734 33291 . - . ID=gene-AB11_RS24225;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AB11_RS24225;old_locus_tag=AB11_4684 NZ_JHDH01000171.1 Protein Homology CDS 32734 33291 . - 0 ID=cds-WP_032224141.1;Parent=gene-AB11_RS24225;Dbxref=GenBank:WP_032224141.1;Name=WP_032224141.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AB11_RS24225;product=YtfJ family protein;protein_id=WP_032224141.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 33616 33822 . + . ID=gene-AB11_RS24230;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AB11_RS24230;old_locus_tag=AB11_4685 NZ_JHDH01000171.1 Protein Homology CDS 33616 33822 . + 0 ID=cds-WP_000689228.1;Parent=gene-AB11_RS24230;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AB11_RS24230;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 33884 35227 . - . ID=gene-AB11_RS24235;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AB11_RS24235;old_locus_tag=AB11_4686 NZ_JHDH01000171.1 Protein Homology CDS 33884 35227 . - 0 ID=cds-WP_000935036.1;Parent=gene-AB11_RS24235;Dbxref=GenBank:WP_000935036.1;Name=WP_000935036.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313223.1;locus_tag=AB11_RS24235;product=hemolysin family protein;protein_id=WP_000935036.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 35550 36188 . - . ID=gene-AB11_RS24240;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AB11_RS24240;old_locus_tag=AB11_4687 NZ_JHDH01000171.1 Protein Homology CDS 35550 36188 . - 0 ID=cds-WP_001295196.1;Parent=gene-AB11_RS24240;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AB11_RS24240;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 36394 38127 . + . ID=gene-AB11_RS24245;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AB11_RS24245;old_locus_tag=AB11_4689 NZ_JHDH01000171.1 Protein Homology CDS 36394 38127 . + 0 ID=cds-WP_001269316.1;Parent=gene-AB11_RS24245;Dbxref=GenBank:WP_001269316.1;Name=WP_001269316.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AB11_RS24245;product=autotransporter assembly complex protein TamA;protein_id=WP_001269316.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 38124 41903 . + . ID=gene-AB11_RS24250;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AB11_RS24250;old_locus_tag=AB11_4690 NZ_JHDH01000171.1 Protein Homology CDS 38124 41903 . + 0 ID=cds-WP_032224145.1;Parent=gene-AB11_RS24250;Dbxref=GenBank:WP_032224145.1;Name=WP_032224145.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313226.1;locus_tag=AB11_RS24250;product=autotransporter assembly complex protein TamB;protein_id=WP_032224145.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 41906 42247 . + . ID=gene-AB11_RS24255;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AB11_RS24255;old_locus_tag=AB11_4691 NZ_JHDH01000171.1 Protein Homology CDS 41906 42247 . + 0 ID=cds-WP_001219160.1;Parent=gene-AB11_RS24255;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AB11_RS24255;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 42627 43157 . - . ID=gene-AB11_RS24260;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AB11_RS24260;old_locus_tag=AB11_4693 NZ_JHDH01000171.1 Protein Homology CDS 42627 43157 . - 0 ID=cds-WP_000055072.1;Parent=gene-AB11_RS24260;Dbxref=GenBank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AB11_RS24260;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 43467 44423 . + . ID=gene-AB11_RS24265;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AB11_RS24265;old_locus_tag=AB11_4694 NZ_JHDH01000171.1 Protein Homology CDS 43467 44423 . + 0 ID=cds-WP_021571031.1;Parent=gene-AB11_RS24265;Dbxref=GenBank:WP_021571031.1;Name=WP_021571031.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AB11_RS24265;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_021571031.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 44563 46065 . + . ID=gene-AB11_RS24270;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AB11_RS24270;old_locus_tag=AB11_4695 NZ_JHDH01000171.1 Protein Homology CDS 44563 46065 . + 0 ID=cds-WP_000210557.1;Parent=gene-AB11_RS24270;Dbxref=GenBank:WP_000210557.1;Name=WP_000210557.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AB11_RS24270;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000210557.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 46079 47101 . + . ID=gene-AB11_RS24275;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AB11_RS24275;old_locus_tag=AB11_4696 NZ_JHDH01000171.1 Protein Homology CDS 46079 47101 . + 0 ID=cds-WP_001351895.1;Parent=gene-AB11_RS24275;Dbxref=GenBank:WP_001351895.1;Name=WP_001351895.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AB11_RS24275;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001351895.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 47088 48083 . + . ID=gene-AB11_RS24280;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AB11_RS24280;old_locus_tag=AB11_4697 NZ_JHDH01000171.1 Protein Homology CDS 47088 48083 . + 0 ID=cds-WP_000596015.1;Parent=gene-AB11_RS24280;Dbxref=GenBank:WP_000596015.1;Name=WP_000596015.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AB11_RS24280;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596015.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 48116 49114 . - . ID=gene-AB11_RS24285;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AB11_RS24285;old_locus_tag=AB11_4698 NZ_JHDH01000171.1 Protein Homology CDS 48116 49114 . - 0 ID=cds-WP_000853753.1;Parent=gene-AB11_RS24285;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AB11_RS24285;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 49290 50663 . + . ID=gene-AB11_RS24290;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AB11_RS24290;old_locus_tag=AB11_4700 NZ_JHDH01000171.1 Protein Homology CDS 49290 50663 . + 0 ID=cds-WP_001219792.1;Parent=gene-AB11_RS24290;Dbxref=GenBank:WP_001219792.1;Name=WP_001219792.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AB11_RS24290;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 50819 51370 . - . ID=gene-AB11_RS24295;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AB11_RS24295;old_locus_tag=AB11_4701 NZ_JHDH01000171.1 Protein Homology CDS 50819 51370 . - 0 ID=cds-WP_000166270.1;Parent=gene-AB11_RS24295;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AB11_RS24295;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 51464 52816 . + . ID=gene-AB11_RS24300;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AB11_RS24300;old_locus_tag=AB11_4702 NZ_JHDH01000171.1 Protein Homology CDS 51464 52816 . + 0 ID=cds-WP_001162171.1;Parent=gene-AB11_RS24300;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AB11_RS24300;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 52999 53385 . + . ID=gene-AB11_RS24305;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AB11_RS24305;old_locus_tag=AB11_4703 NZ_JHDH01000171.1 Protein Homology CDS 52999 53385 . + 0 ID=cds-WP_001232255.1;Parent=gene-AB11_RS24305;Dbxref=GenBank:WP_001232255.1;Name=WP_001232255.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AB11_RS24305;product=cytochrome b562;protein_id=WP_001232255.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 53430 53894 . - . ID=gene-AB11_RS24310;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AB11_RS24310;old_locus_tag=AB11_4704 NZ_JHDH01000171.1 Protein Homology CDS 53430 53894 . - 0 ID=cds-WP_001106226.1;Parent=gene-AB11_RS24310;Dbxref=GenBank:WP_001106226.1;Name=WP_001106226.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AB11_RS24310;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106226.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 54052 56190 . - . ID=gene-AB11_RS24315;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AB11_RS24315;old_locus_tag=AB11_4705 NZ_JHDH01000171.1 Protein Homology CDS 54052 56190 . - 0 ID=cds-WP_000187791.1;Parent=gene-AB11_RS24315;Dbxref=GenBank:WP_000187791.1;Name=WP_000187791.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AB11_RS24315;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187791.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 56584 58239 . - . ID=gene-AB11_RS24320;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AB11_RS24320;old_locus_tag=AB11_4706 NZ_JHDH01000171.1 Protein Homology CDS 56584 58239 . - 0 ID=cds-WP_000183355.1;Parent=gene-AB11_RS24320;Dbxref=GenBank:WP_000183355.1;Name=WP_000183355.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AB11_RS24320;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000183355.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 58289 59710 . - . ID=gene-AB11_RS24325;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AB11_RS24325;old_locus_tag=AB11_4707 NZ_JHDH01000171.1 Protein Homology CDS 58289 59710 . - 0 ID=cds-WP_001299664.1;Parent=gene-AB11_RS24325;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AB11_RS24325;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 59829 60776 . - . ID=gene-AB11_RS24330;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AB11_RS24330;old_locus_tag=AB11_4708 NZ_JHDH01000171.1 Protein Homology CDS 59829 60776 . - 0 ID=cds-WP_001181324.1;Parent=gene-AB11_RS24330;Dbxref=GenBank:WP_001181324.1;Name=WP_001181324.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AB11_RS24330;product=trehalose operon repressor TreR;protein_id=WP_001181324.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 60961 61014 . + . ID=gene-AB11_RS24335;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AB11_RS24335 NZ_JHDH01000171.1 Protein Homology CDS 60961 61014 . + 0 ID=cds-WP_001387276.1;Parent=gene-AB11_RS24335;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AB11_RS24335;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 61155 63851 . + . ID=gene-AB11_RS24340;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AB11_RS24340;old_locus_tag=AB11_4709 NZ_JHDH01000171.1 Protein Homology CDS 61155 63851 . + 0 ID=cds-WP_000471866.1;Parent=gene-AB11_RS24340;Dbxref=GenBank:WP_000471866.1;Name=WP_000471866.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AB11_RS24340;product=magnesium-translocating P-type ATPase;protein_id=WP_000471866.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 64057 64443 . - . ID=gene-AB11_RS24345;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AB11_RS24345;old_locus_tag=AB11_4710 NZ_JHDH01000171.1 Protein Homology CDS 64057 64443 . - 0 ID=cds-WP_000047539.1;Parent=gene-AB11_RS24345;Dbxref=GenBank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AB11_RS24345;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 64516 64977 . - . ID=gene-AB11_RS24350;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AB11_RS24350;old_locus_tag=AB11_4711 NZ_JHDH01000171.1 Protein Homology CDS 64516 64977 . - 0 ID=cds-WP_000148581.1;Parent=gene-AB11_RS24350;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AB11_RS24350;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 64990 65925 . - . ID=gene-AB11_RS24355;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AB11_RS24355;old_locus_tag=AB11_4712 NZ_JHDH01000171.1 Protein Homology CDS 64990 65925 . - 0 ID=cds-WP_000013046.1;Parent=gene-AB11_RS24355;Dbxref=GenBank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AB11_RS24355;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 65929 66063 . - . ID=gene-AB11_RS24360;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AB11_RS24360 NZ_JHDH01000171.1 Protein Homology CDS 65929 66063 . - 0 ID=cds-WP_001296693.1;Parent=gene-AB11_RS24360;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AB11_RS24360;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 66344 66739 . - . ID=gene-AB11_RS24365;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AB11_RS24365;old_locus_tag=AB11_4713 NZ_JHDH01000171.1 Protein Homology CDS 66344 66739 . - 0 ID=cds-WP_000230264.1;Parent=gene-AB11_RS24365;Dbxref=GenBank:WP_000230264.1;Name=WP_000230264.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AB11_RS24365;product=RidA family protein;protein_id=WP_000230264.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 66870 67583 . - . ID=gene-AB11_RS24370;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AB11_RS24370;old_locus_tag=AB11_4714 NZ_JHDH01000171.1 Protein Homology CDS 66870 67583 . - 0 ID=cds-WP_000500716.1;Parent=gene-AB11_RS24370;Dbxref=GenBank:WP_000500716.1;Name=WP_000500716.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AB11_RS24370;product=SDR family oxidoreductase;protein_id=WP_000500716.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 67654 68247 . + . ID=gene-AB11_RS24375;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AB11_RS24375;old_locus_tag=AB11_4715 NZ_JHDH01000171.1 Protein Homology CDS 67654 68247 . + 0 ID=cds-WP_000256672.1;Parent=gene-AB11_RS24375;Dbxref=GenBank:WP_000256672.1;Name=WP_000256672.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=AB11_RS24375;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256672.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 68392 68844 . + . ID=gene-AB11_RS24380;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AB11_RS24380;old_locus_tag=AB11_4716 NZ_JHDH01000171.1 Protein Homology CDS 68392 68844 . + 0 ID=cds-WP_000583471.1;Parent=gene-AB11_RS24380;Dbxref=GenBank:WP_000583471.1;Name=WP_000583471.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AB11_RS24380;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_000583471.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 68967 70550 . + . ID=gene-AB11_RS24385;Name=AB11_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24385;old_locus_tag=AB11_4717 NZ_JHDH01000171.1 Protein Homology CDS 68967 70550 . + 0 ID=cds-WP_001514407.1;Parent=gene-AB11_RS24385;Dbxref=GenBank:WP_001514407.1;Name=WP_001514407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619071.1;locus_tag=AB11_RS24385;product=hypothetical protein;protein_id=WP_001514407.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 70747 71751 . - . ID=gene-AB11_RS24390;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AB11_RS24390;old_locus_tag=AB11_4718 NZ_JHDH01000171.1 Protein Homology CDS 70747 71751 . - 0 ID=cds-WP_000012926.1;Parent=gene-AB11_RS24390;Dbxref=GenBank:WP_000012926.1;Name=WP_000012926.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AB11_RS24390;product=ornithine carbamoyltransferase;protein_id=WP_000012926.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 71913 72329 . + . ID=gene-AB11_RS24395;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AB11_RS24395;old_locus_tag=AB11_4719 NZ_JHDH01000171.1 Protein Homology CDS 71913 72329 . + 0 ID=cds-WP_000002953.1;Parent=gene-AB11_RS24395;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AB11_RS24395;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 72375 72878 . - . ID=gene-AB11_RS24400;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AB11_RS24400;old_locus_tag=AB11_4720 NZ_JHDH01000171.1 Protein Homology CDS 72375 72878 . - 0 ID=cds-WP_001059412.1;Parent=gene-AB11_RS24400;Dbxref=GenBank:WP_001059412.1;Name=WP_001059412.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AB11_RS24400;product=GNAT family N-acetyltransferase;protein_id=WP_001059412.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 73071 74267 . + . ID=gene-AB11_RS24405;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AB11_RS24405;old_locus_tag=AB11_4721 NZ_JHDH01000171.1 Protein Homology CDS 73071 74267 . + 0 ID=cds-WP_000079658.1;Parent=gene-AB11_RS24405;Dbxref=GenBank:WP_000079658.1;Name=WP_000079658.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AB11_RS24405;product=YjgN family protein;protein_id=WP_000079658.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 74321 77176 . - . ID=gene-AB11_RS24410;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AB11_RS24410;old_locus_tag=AB11_4722 NZ_JHDH01000171.1 Protein Homology CDS 74321 77176 . - 0 ID=cds-WP_032224149.1;Parent=gene-AB11_RS24410;Dbxref=GenBank:WP_032224149.1;Name=WP_032224149.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AB11_RS24410;product=valine--tRNA ligase;protein_id=WP_032224149.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 77176 77619 . - . ID=gene-AB11_RS24415;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AB11_RS24415;old_locus_tag=AB11_4723 NZ_JHDH01000171.1 Protein Homology CDS 77176 77619 . - 0 ID=cds-WP_000786399.1;Parent=gene-AB11_RS24415;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AB11_RS24415;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 77877 79388 . - . ID=gene-AB11_RS24420;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AB11_RS24420;old_locus_tag=AB11_4724 NZ_JHDH01000171.1 Protein Homology CDS 77877 79388 . - 0 ID=cds-WP_000397144.1;Parent=gene-AB11_RS24420;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AB11_RS24420;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 79542 79592 . + . ID=gene-AB11_RS25400;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AB11_RS25400 NZ_JHDH01000171.1 Protein Homology CDS 79542 79592 . + 0 ID=cds-WP_211180521.1;Parent=gene-AB11_RS25400;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AB11_RS25400;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 79655 80755 . + . ID=gene-AB11_RS24425;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB11_RS24425;old_locus_tag=AB11_4726 NZ_JHDH01000171.1 Protein Homology CDS 79655 80755 . + 0 ID=cds-WP_000584114.1;Parent=gene-AB11_RS24425;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AB11_RS24425;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 80755 81837 . + . ID=gene-AB11_RS24430;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB11_RS24430;old_locus_tag=AB11_4727 NZ_JHDH01000171.1 Protein Homology CDS 80755 81837 . + 0 ID=cds-WP_001295681.1;Parent=gene-AB11_RS24430;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AB11_RS24430;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 81956 83458 . - . ID=gene-AB11_RS24435;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AB11_RS24435;old_locus_tag=AB11_4728 NZ_JHDH01000171.1 Protein Homology CDS 81956 83458 . - 0 ID=cds-WP_001294550.1;Parent=gene-AB11_RS24435;Dbxref=GenBank:WP_001294550.1;Name=WP_001294550.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=AB11_RS24435;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_001294550.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 83588 84607 . - . ID=gene-AB11_RS24440;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AB11_RS24440;old_locus_tag=AB11_4729 NZ_JHDH01000171.1 Protein Homology CDS 83588 84607 . - 0 ID=cds-WP_001299662.1;Parent=gene-AB11_RS24440;Dbxref=GenBank:WP_001299662.1;Name=WP_001299662.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AB11_RS24440;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001299662.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 84804 84888 . + . ID=gene-AB11_RS24445;Name=AB11_RS24445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS24445;old_locus_tag=AB11_4731 NZ_JHDH01000171.1 tRNAscan-SE tRNA 84804 84888 . + . ID=rna-AB11_RS24445;Parent=gene-AB11_RS24445;anticodon=(pos:84838..84840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24445;product=tRNA-Leu NZ_JHDH01000171.1 tRNAscan-SE exon 84804 84888 . + . ID=exon-AB11_RS24445-1;Parent=rna-AB11_RS24445;anticodon=(pos:84838..84840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24445;product=tRNA-Leu NZ_JHDH01000171.1 RefSeq gene 85113 88229 . - . ID=gene-AB11_RS24450;Name=AB11_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24450;old_locus_tag=AB11_4732 NZ_JHDH01000171.1 Protein Homology CDS 85113 88229 . - 0 ID=cds-WP_021571035.1;Parent=gene-AB11_RS24450;Dbxref=GenBank:WP_021571035.1;Name=WP_021571035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764166.1;locus_tag=AB11_RS24450;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_021571035.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 88351 89562 . - . ID=gene-AB11_RS24455;Name=AB11_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24455;old_locus_tag=AB11_4733 NZ_JHDH01000171.1 Protein Homology CDS 88351 89562 . - 0 ID=cds-WP_032224152.1;Parent=gene-AB11_RS24455;Dbxref=GenBank:WP_032224152.1;Name=WP_032224152.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513663.1;locus_tag=AB11_RS24455;product=restriction endonuclease subunit S;protein_id=WP_032224152.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 89559 91115 . - . ID=gene-AB11_RS24460;Name=AB11_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24460;old_locus_tag=AB11_4734 NZ_JHDH01000171.1 Protein Homology CDS 89559 91115 . - 0 ID=cds-WP_032224154.1;Parent=gene-AB11_RS24460;Dbxref=GenBank:WP_032224154.1;Name=WP_032224154.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220915.1;locus_tag=AB11_RS24460;product=type I restriction-modification system subunit M;protein_id=WP_032224154.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 91421 92254 . + . ID=gene-AB11_RS24465;Name=AB11_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24465;old_locus_tag=AB11_4735 NZ_JHDH01000171.1 Protein Homology CDS 91421 92254 . + 0 ID=cds-WP_032224157.1;Parent=gene-AB11_RS24465;Dbxref=GenBank:WP_032224157.1;Name=WP_032224157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=AB11_RS24465;product=DUF4942 domain-containing protein;protein_id=WP_032224157.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 92613 94667 . + . ID=gene-AB11_RS24470;Name=AB11_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24470;old_locus_tag=AB11_4737 NZ_JHDH01000171.1 Protein Homology CDS 92613 94667 . + 0 ID=cds-WP_032224160.1;Parent=gene-AB11_RS24470;Dbxref=GenBank:WP_032224160.1;Name=WP_032224160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209166.1;locus_tag=AB11_RS24470;product=McrB family protein;protein_id=WP_032224160.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 94664 95974 . + . ID=gene-AB11_RS24475;Name=AB11_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24475;old_locus_tag=AB11_4738 NZ_JHDH01000171.1 Protein Homology CDS 94664 95974 . + 0 ID=cds-WP_021571038.1;Parent=gene-AB11_RS24475;Dbxref=GenBank:WP_021571038.1;Name=WP_021571038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842794.1;locus_tag=AB11_RS24475;product=McrC family protein;protein_id=WP_021571038.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 96037 96909 . - . ID=gene-AB11_RS24480;Name=AB11_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24480;old_locus_tag=AB11_4739 NZ_JHDH01000171.1 Protein Homology CDS 96037 96909 . - 0 ID=cds-WP_000168564.1;Parent=gene-AB11_RS24480;Dbxref=GenBank:WP_000168564.1;Name=WP_000168564.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168579.1;locus_tag=AB11_RS24480;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000168564.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 97046 97696 . + . ID=gene-AB11_RS24485;Name=AB11_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24485;old_locus_tag=AB11_4741 NZ_JHDH01000171.1 Protein Homology CDS 97046 97696 . + 0 ID=cds-WP_021571039.1;Parent=gene-AB11_RS24485;Dbxref=GenBank:WP_021571039.1;Name=WP_021571039.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586610.1;locus_tag=AB11_RS24485;product=HNH endonuclease;protein_id=WP_021571039.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 97696 97785 . + . ID=gene-AB11_RS26255;Name=AB11_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26255 NZ_JHDH01000171.1 Protein Homology CDS 97696 97785 . + 0 ID=cds-WP_418886024.1;Parent=gene-AB11_RS26255;Dbxref=GenBank:WP_418886024.1;Name=WP_418886024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AB11_RS26255;product=hypothetical protein;protein_id=WP_418886024.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 98118 98684 . - . ID=gene-AB11_RS26260;Name=AB11_RS26260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26260;partial=true;pseudo=true;start_range=.,98118 NZ_JHDH01000171.1 Protein Homology CDS 98118 98684 . - 0 ID=cds-AB11_RS26260;Parent=gene-AB11_RS26260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AB11_RS26260;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,98118;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 98749 99855 . - . ID=gene-AB11_RS24495;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AB11_RS24495;old_locus_tag=AB11_4743 NZ_JHDH01000171.1 Protein Homology CDS 98749 99855 . - 0 ID=cds-WP_032224163.1;Parent=gene-AB11_RS24495;Dbxref=GenBank:WP_032224163.1;Name=WP_032224163.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AB11_RS24495;product=N-acetylneuraminate epimerase;protein_id=WP_032224163.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 99875 100591 . - . ID=gene-AB11_RS24500;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AB11_RS24500;old_locus_tag=AB11_4744 NZ_JHDH01000171.1 Protein Homology CDS 99875 100591 . - 0 ID=cds-WP_001295734.1;Parent=gene-AB11_RS24500;Dbxref=GenBank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AB11_RS24500;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 102048 102650 . + . ID=gene-AB11_RS24505;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AB11_RS24505;old_locus_tag=AB11_4745 NZ_JHDH01000171.1 Protein Homology CDS 102048 102650 . + 0 ID=cds-WP_000790583.1;Parent=gene-AB11_RS24505;Dbxref=GenBank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB11_RS24505;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 103128 103724 . + . ID=gene-AB11_RS24510;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB11_RS24510;old_locus_tag=AB11_4746 NZ_JHDH01000171.1 Protein Homology CDS 103128 103724 . + 0 ID=cds-WP_000044711.1-2;Parent=gene-AB11_RS24510;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB11_RS24510;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 104205 104753 . + . ID=gene-AB11_RS24515;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB11_RS24515;old_locus_tag=AB11_4747 NZ_JHDH01000171.1 Protein Homology CDS 104205 104753 . + 0 ID=cds-WP_000695546.1-2;Parent=gene-AB11_RS24515;Dbxref=GenBank:WP_000695546.1;Name=WP_000695546.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AB11_RS24515;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695546.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 104818 105357 . + . ID=gene-AB11_RS24520;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AB11_RS24520;old_locus_tag=AB11_4748 NZ_JHDH01000171.1 Protein Homology CDS 104818 105357 . + 0 ID=cds-WP_000824105.1;Parent=gene-AB11_RS24520;Dbxref=GenBank:WP_000824105.1;Name=WP_000824105.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AB11_RS24520;product=fimbrial protein;protein_id=WP_000824105.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 105394 106119 . + . ID=gene-AB11_RS24525;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB11_RS24525;old_locus_tag=AB11_4749 NZ_JHDH01000171.1 Protein Homology CDS 105394 106119 . + 0 ID=cds-WP_000066560.1;Parent=gene-AB11_RS24525;Dbxref=GenBank:WP_000066560.1;Name=WP_000066560.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AB11_RS24525;product=type 1 fimbria chaperone FimC;protein_id=WP_000066560.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 106186 108822 . + . ID=gene-AB11_RS24530;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AB11_RS24530;old_locus_tag=AB11_4750 NZ_JHDH01000171.1 Protein Homology CDS 106186 108822 . + 0 ID=cds-WP_032224165.1;Parent=gene-AB11_RS24530;Dbxref=GenBank:WP_032224165.1;Name=WP_032224165.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=AB11_RS24530;product=fimbrial usher FimD;protein_id=WP_032224165.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 108832 109362 . + . ID=gene-AB11_RS24535;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AB11_RS24535;old_locus_tag=AB11_4751 NZ_JHDH01000171.1 Protein Homology CDS 108832 109362 . + 0 ID=cds-WP_001244826.1;Parent=gene-AB11_RS24535;Dbxref=GenBank:WP_001244826.1;Name=WP_001244826.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=AB11_RS24535;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244826.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 109435 109878 . + . ID=gene-AB11_RS24540;Name=AB11_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24540;old_locus_tag=AB11_4752 NZ_JHDH01000171.1 Protein Homology CDS 109435 109878 . + 0 ID=cds-WP_077897989.1;Parent=gene-AB11_RS24540;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585803.1;locus_tag=AB11_RS24540;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 109898 110800 . + . ID=gene-AB11_RS24545;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB11_RS24545;old_locus_tag=AB11_4753 NZ_JHDH01000171.1 Protein Homology CDS 109898 110800 . + 0 ID=cds-WP_000832229.1;Parent=gene-AB11_RS24545;Dbxref=GenBank:WP_000832229.1;Name=WP_000832229.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AB11_RS24545;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832229.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 111043 111135 . - . ID=gene-AB11_RS24550;Name=AB11_RS24550;end_range=111135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24550;partial=true;pseudo=true NZ_JHDH01000171.1 Protein Homology CDS 111043 111135 . - 0 ID=cds-AB11_RS24550;Parent=gene-AB11_RS24550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0035429,GO:0015128,GO:0016020;end_range=111135,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AB11_RS24550;partial=true;product=GntT/GntP/DsdX family permease;pseudo=true;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 111587 112771 . + . ID=gene-AB11_RS24555;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AB11_RS24555;old_locus_tag=AB11_4754 NZ_JHDH01000171.1 Protein Homology CDS 111587 112771 . + 0 ID=cds-WP_000438591.1;Parent=gene-AB11_RS24555;Dbxref=GenBank:WP_000438591.1;Name=WP_000438591.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AB11_RS24555;product=mannonate dehydratase;protein_id=WP_000438591.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 112852 114312 . + . ID=gene-AB11_RS24560;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AB11_RS24560;old_locus_tag=AB11_4755 NZ_JHDH01000171.1 Protein Homology CDS 112852 114312 . + 0 ID=cds-WP_000208222.1;Parent=gene-AB11_RS24560;Dbxref=GenBank:WP_000208222.1;Name=WP_000208222.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AB11_RS24560;product=fructuronate reductase;protein_id=WP_000208222.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 114527 115300 . + . ID=gene-AB11_RS24565;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AB11_RS24565;old_locus_tag=AB11_4756 NZ_JHDH01000171.1 Protein Homology CDS 114527 115300 . + 0 ID=cds-WP_032224166.1;Parent=gene-AB11_RS24565;Dbxref=GenBank:WP_032224166.1;Name=WP_032224166.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=AB11_RS24565;product=Uxu operon transcriptional regulator;protein_id=WP_032224166.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 115441 116271 . - . ID=gene-AB11_RS24570;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AB11_RS24570;old_locus_tag=AB11_4757 NZ_JHDH01000171.1 Protein Homology CDS 115441 116271 . - 0 ID=cds-WP_000062547.1;Parent=gene-AB11_RS24570;Dbxref=GenBank:WP_000062547.1;Name=WP_000062547.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AB11_RS24570;product=DUF2686 family protein;protein_id=WP_000062547.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 116557 116607 . + . ID=gene-AB11_RS26265;Name=AB11_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS26265 NZ_JHDH01000171.1 Protein Homology CDS 116557 116607 . + 0 ID=cds-WP_418886025.1;Parent=gene-AB11_RS26265;Dbxref=GenBank:WP_418886025.1;Name=WP_418886025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AB11_RS26265;product=hypothetical protein;protein_id=WP_418886025.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 116604 116747 . + . ID=gene-AB11_RS25880;Name=AB11_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25880 NZ_JHDH01000171.1 Protein Homology CDS 116604 116747 . + 0 ID=cds-WP_269439472.1;Parent=gene-AB11_RS25880;Dbxref=GenBank:WP_269439472.1;Name=WP_269439472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AB11_RS25880;product=hypothetical protein;protein_id=WP_269439472.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 116863 116946 . + . ID=gene-AB11_RS24575;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AB11_RS24575 NZ_JHDH01000171.1 Protein Homology CDS 116863 116946 . + 0 ID=cds-WP_123004000.1;Parent=gene-AB11_RS24575;Dbxref=GenBank:WP_123004000.1;Name=WP_123004000.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AB11_RS24575;product=iraD leader peptide IdlP;protein_id=WP_123004000.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 116943 117335 . + . ID=gene-AB11_RS24580;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AB11_RS24580;old_locus_tag=AB11_4759 NZ_JHDH01000171.1 Protein Homology CDS 116943 117335 . + 0 ID=cds-WP_021571042.1;Parent=gene-AB11_RS24580;Dbxref=GenBank:WP_021571042.1;Name=WP_021571042.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313312.2;locus_tag=AB11_RS24580;product=anti-adapter protein IraD;protein_id=WP_021571042.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 117328 118239 . - . ID=gene-AB11_RS24585;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AB11_RS24585;old_locus_tag=AB11_4760 NZ_JHDH01000171.1 Protein Homology CDS 117328 118239 . - 0 ID=cds-WP_000340758.1;Parent=gene-AB11_RS24585;Dbxref=GenBank:WP_000340758.1;Name=WP_000340758.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AB11_RS24585;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340758.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 118304 119476 . - . ID=gene-AB11_RS24590;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AB11_RS24590;old_locus_tag=AB11_4761 NZ_JHDH01000171.1 Protein Homology CDS 118304 119476 . - 0 ID=cds-WP_032224169.1;Parent=gene-AB11_RS24590;Dbxref=GenBank:WP_032224169.1;Name=WP_032224169.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AB11_RS24590;product=beta-aspartyl-peptidase;protein_id=WP_032224169.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 119489 119950 . - . ID=gene-AB11_RS24595;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AB11_RS24595;old_locus_tag=AB11_4762 NZ_JHDH01000171.1 Protein Homology CDS 119489 119950 . - 0 ID=cds-WP_000211971.1;Parent=gene-AB11_RS24595;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AB11_RS24595;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 119947 120630 . - . ID=gene-AB11_RS24600;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AB11_RS24600;old_locus_tag=AB11_4763 NZ_JHDH01000171.1 Protein Homology CDS 119947 120630 . - 0 ID=cds-WP_001295597.1;Parent=gene-AB11_RS24600;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AB11_RS24600;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 120880 121434 . + . ID=gene-AB11_RS24605;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AB11_RS24605;old_locus_tag=AB11_4765 NZ_JHDH01000171.1 Protein Homology CDS 120880 121434 . + 0 ID=cds-WP_001151863.1;Parent=gene-AB11_RS24605;Dbxref=GenBank:WP_001151863.1;Name=WP_001151863.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AB11_RS24605;product=RNA 2'-phosphotransferase;protein_id=WP_001151863.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 121447 122625 . - . ID=gene-AB11_RS24610;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AB11_RS24610;old_locus_tag=AB11_4766 NZ_JHDH01000171.1 Protein Homology CDS 121447 122625 . - 0 ID=cds-WP_001141202.1;Parent=gene-AB11_RS24610;Dbxref=GenBank:WP_001141202.1;Name=WP_001141202.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AB11_RS24610;product=MFS transporter;protein_id=WP_001141202.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 122693 123553 . - . ID=gene-AB11_RS24615;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AB11_RS24615;old_locus_tag=AB11_4767 NZ_JHDH01000171.1 Protein Homology CDS 122693 123553 . - 0 ID=cds-WP_001298932.1;Parent=gene-AB11_RS24615;Dbxref=GenBank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AB11_RS24615;product=SdiA-regulated domain-containing protein;protein_id=WP_001298932.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 123618 123875 . - . ID=gene-AB11_RS24620;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AB11_RS24620;old_locus_tag=AB11_4768 NZ_JHDH01000171.1 Protein Homology CDS 123618 123875 . - 0 ID=cds-WP_000657676.1;Parent=gene-AB11_RS24620;Dbxref=GenBank:WP_000657676.1;Name=WP_000657676.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AB11_RS24620;product=DUF3343 domain-containing protein;protein_id=WP_000657676.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 123872 124639 . - . ID=gene-AB11_RS24625;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AB11_RS24625;old_locus_tag=AB11_4769 NZ_JHDH01000171.1 Protein Homology CDS 123872 124639 . - 0 ID=cds-WP_000222491.1;Parent=gene-AB11_RS24625;Dbxref=GenBank:WP_000222491.1;Name=WP_000222491.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418754.2;locus_tag=AB11_RS24625;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222491.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 124649 125800 . - . ID=gene-AB11_RS24630;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AB11_RS24630;old_locus_tag=AB11_4770 NZ_JHDH01000171.1 Protein Homology CDS 124649 125800 . - 0 ID=cds-WP_001351906.1;Parent=gene-AB11_RS24630;Dbxref=GenBank:WP_001351906.1;Name=WP_001351906.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AB11_RS24630;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001351906.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 125916 127196 . - . ID=gene-AB11_RS24635;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AB11_RS24635;old_locus_tag=AB11_4771 NZ_JHDH01000171.1 Protein Homology CDS 125916 127196 . - 0 ID=cds-WP_001037408.1;Parent=gene-AB11_RS24635;Dbxref=GenBank:WP_001037408.1;Name=WP_001037408.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AB11_RS24635;product=DUF445 domain-containing protein;protein_id=WP_001037408.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 127237 128469 . - . ID=gene-AB11_RS24640;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AB11_RS24640;old_locus_tag=AB11_4772 NZ_JHDH01000171.1 Protein Homology CDS 127237 128469 . - 0 ID=cds-WP_001136978.1;Parent=gene-AB11_RS24640;Dbxref=GenBank:WP_001136978.1;Name=WP_001136978.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AB11_RS24640;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001136978.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 128936 129892 . + . ID=gene-AB11_RS24645;Name=AB11_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24645;old_locus_tag=AB11_4774 NZ_JHDH01000171.1 Protein Homology CDS 128936 129892 . + 0 ID=cds-WP_021571043.1;Parent=gene-AB11_RS24645;Dbxref=GenBank:WP_021571043.1;Name=WP_021571043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=AB11_RS24645;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_021571043.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 130135 131547 . - . ID=gene-AB11_RS24650;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=AB11_RS24650;old_locus_tag=AB11_4775 NZ_JHDH01000171.1 Protein Homology CDS 130135 131547 . - 0 ID=cds-WP_032224171.1;Parent=gene-AB11_RS24650;Dbxref=GenBank:WP_032224171.1;Name=WP_032224171.1;Ontology_term=GO:0030170;gbkey=CDS;gene=yjiR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=AB11_RS24650;product=aminotransferase-like domain-containing protein;protein_id=WP_032224171.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 131724 131888 . + . ID=gene-AB11_RS24655;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=AB11_RS24655;old_locus_tag=AB11_4776 NZ_JHDH01000171.1 Protein Homology CDS 131724 131888 . + 0 ID=cds-WP_000394276.1;Parent=gene-AB11_RS24655;Dbxref=GenBank:WP_000394276.1;Name=WP_000394276.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=AB11_RS24655;product=DUF1127 domain-containing protein;protein_id=WP_000394276.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 131985 132638 . + . ID=gene-AB11_RS25655;Name=AB11_RS25655;end_range=132638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS25655;partial=true;pseudo=true NZ_JHDH01000171.1 Protein Homology CDS 131985 132638 . + 0 ID=cds-AB11_RS25655;Parent=gene-AB11_RS25655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=132638,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.6;locus_tag=AB11_RS25655;partial=true;product=DUF262 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 132915 134078 . + . ID=gene-AB11_RS25660;Name=AB11_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25660 NZ_JHDH01000171.1 Protein Homology CDS 132915 134078 . + 0 ID=cds-WP_071531326.1;Parent=gene-AB11_RS25660;Dbxref=GenBank:WP_071531326.1;Name=WP_071531326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313332.1;locus_tag=AB11_RS25660;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_071531326.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 134125 134466 . - . ID=gene-AB11_RS24665;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=AB11_RS24665;old_locus_tag=AB11_4778 NZ_JHDH01000171.1 Protein Homology CDS 134125 134466 . - 0 ID=cds-WP_000132621.1;Parent=gene-AB11_RS24665;Dbxref=GenBank:WP_000132621.1;Name=WP_000132621.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710072.1;locus_tag=AB11_RS24665;product=endoribonuclease SymE;protein_id=WP_000132621.1;transl_table=11 NZ_JHDH01000171.1 RefSeq gene 134687 136450 . - . ID=gene-AB11_RS24670;Name=AB11_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24670;old_locus_tag=AB11_4779 NZ_JHDH01000171.1 Protein Homology CDS 134687 136450 . - 0 ID=cds-WP_021571045.1;Parent=gene-AB11_RS24670;Dbxref=GenBank:WP_021571045.1;Name=WP_021571045.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313333.1;locus_tag=AB11_RS24670;product=restriction endonuclease subunit S;protein_id=WP_021571045.1;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 136450 137112 . - . ID=gene-AB11_RS24675;Name=AB11_RS24675;end_range=137112,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24675;old_locus_tag=AB11_4780;partial=true;pseudo=true NZ_JHDH01000171.1 Protein Homology CDS 136450 137112 . - 0 ID=cds-AB11_RS24675;Parent=gene-AB11_RS24675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677,GO:0008170;end_range=137112,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=AB11_RS24675;partial=true;product=N-6 DNA methylase;pseudo=true;transl_table=11 NZ_JHDH01000171.1 RefSeq pseudogene 137178 137792 . + . ID=gene-AB11_RS24680;Name=AB11_RS24680;end_range=137792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24680;partial=true;pseudo=true NZ_JHDH01000171.1 Protein Homology CDS 137178 137792 . + 0 ID=cds-AB11_RS24680;Parent=gene-AB11_RS24680;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=137792,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS24680;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDH01000172.1 1 87812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444050 NZ_JHDH01000172.1 RefSeq region 1 87812 . + . ID=NZ_JHDH01000172.1:1..87812;Dbxref=taxon:1444050;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-176-05_S1_C1 NZ_JHDH01000172.1 RefSeq pseudogene 1 594 . + . ID=gene-AB11_RS24685;Name=AB11_RS24685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24685;old_locus_tag=AB11_4783;partial=true;pseudo=true;start_range=.,1 NZ_JHDH01000172.1 Protein Homology CDS 1 594 . + 0 ID=cds-AB11_RS24685;Parent=gene-AB11_RS24685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB11_RS24685;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDH01000172.1 RefSeq pseudogene 625 1110 . - . ID=gene-AB11_RS24690;Name=AB11_RS24690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS24690;old_locus_tag=AB11_4784;partial=true;pseudo=true;start_range=.,625 NZ_JHDH01000172.1 Protein Homology CDS 625 1110 . - 0 ID=cds-AB11_RS24690;Parent=gene-AB11_RS24690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=AB11_RS24690;partial=true;product=type I restriction endonuclease;pseudo=true;start_range=.,625;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 1388 3040 . + . ID=gene-AB11_RS24695;Name=AB11_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24695;old_locus_tag=AB11_4785 NZ_JHDH01000172.1 Protein Homology CDS 1388 3040 . + 0 ID=cds-WP_000387532.1;Parent=gene-AB11_RS24695;Dbxref=GenBank:WP_000387532.1;Name=WP_000387532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298048.1;locus_tag=AB11_RS24695;product=DUF262 domain-containing protein;protein_id=WP_000387532.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 3109 4065 . - . ID=gene-AB11_RS24700;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AB11_RS24700;old_locus_tag=AB11_4786 NZ_JHDH01000172.1 Protein Homology CDS 3109 4065 . - 0 ID=cds-WP_001295525.1;Parent=gene-AB11_RS24700;Dbxref=GenBank:WP_001295525.1;Name=WP_001295525.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AB11_RS24700;product=GTPase;protein_id=WP_001295525.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 4076 4279 . - . ID=gene-AB11_RS24705;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AB11_RS24705;old_locus_tag=AB11_4787 NZ_JHDH01000172.1 Protein Homology CDS 4076 4279 . - 0 ID=cds-WP_000467859.1;Parent=gene-AB11_RS24705;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AB11_RS24705;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 4410 6560 . - . ID=gene-AB11_RS24710;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AB11_RS24710;old_locus_tag=AB11_4788 NZ_JHDH01000172.1 Protein Homology CDS 4410 6560 . - 0 ID=cds-WP_001428843.1;Parent=gene-AB11_RS24710;Dbxref=GenBank:WP_001428843.1;Name=WP_001428843.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313340.2;locus_tag=AB11_RS24710;product=pyruvate/proton symporter BtsT;protein_id=WP_001428843.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 6953 7465 . - . ID=gene-AB11_RS24715;Name=AB11_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24715;old_locus_tag=AB11_4789 NZ_JHDH01000172.1 Protein Homology CDS 6953 7465 . - 0 ID=cds-WP_001175451.1;Parent=gene-AB11_RS24715;Dbxref=GenBank:WP_001175451.1;Name=WP_001175451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710082.1;locus_tag=AB11_RS24715;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001175451.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 7483 9045 . - . ID=gene-AB11_RS24720;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=AB11_RS24720;old_locus_tag=AB11_4790 NZ_JHDH01000172.1 Protein Homology CDS 7483 9045 . - 0 ID=cds-WP_000801473.1;Parent=gene-AB11_RS24720;Dbxref=GenBank:WP_000801473.1;Name=WP_000801473.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=AB11_RS24720;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801473.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 9296 10186 . - . ID=gene-AB11_RS24725;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=AB11_RS24725;old_locus_tag=AB11_4791 NZ_JHDH01000172.1 Protein Homology CDS 9296 10186 . - 0 ID=cds-WP_000332890.1;Parent=gene-AB11_RS24725;Dbxref=GenBank:WP_000332890.1;Name=WP_000332890.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801836.1;locus_tag=AB11_RS24725;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000332890.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 10196 11572 . - . ID=gene-AB11_RS24730;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=AB11_RS24730;old_locus_tag=AB11_4792 NZ_JHDH01000172.1 Protein Homology CDS 10196 11572 . - 0 ID=cds-WP_001285765.1;Parent=gene-AB11_RS24730;Dbxref=GenBank:WP_001285765.1;Name=WP_001285765.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=AB11_RS24730;product=4-hydroxyphenylacetate permease;protein_id=WP_001285765.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 11747 12535 . - . ID=gene-AB11_RS24735;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=AB11_RS24735;old_locus_tag=AB11_4793 NZ_JHDH01000172.1 Protein Homology CDS 11747 12535 . - 0 ID=cds-WP_000431702.1;Parent=gene-AB11_RS24735;Dbxref=GenBank:WP_000431702.1;Name=WP_000431702.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966060.1;locus_tag=AB11_RS24735;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000431702.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 12546 13349 . - . ID=gene-AB11_RS24740;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=AB11_RS24740;old_locus_tag=AB11_4794 NZ_JHDH01000172.1 Protein Homology CDS 12546 13349 . - 0 ID=cds-WP_000459750.1;Parent=gene-AB11_RS24740;Dbxref=GenBank:WP_000459750.1;Name=WP_000459750.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710089.2;locus_tag=AB11_RS24740;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000459750.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 13460 13840 . - . ID=gene-AB11_RS24745;Name=AB11_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24745;old_locus_tag=AB11_4795 NZ_JHDH01000172.1 Protein Homology CDS 13460 13840 . - 0 ID=cds-WP_001119863.1;Parent=gene-AB11_RS24745;Dbxref=GenBank:WP_001119863.1;Name=WP_001119863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710090.1;locus_tag=AB11_RS24745;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119863.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 13850 14701 . - . ID=gene-AB11_RS24750;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=AB11_RS24750;old_locus_tag=AB11_4796 NZ_JHDH01000172.1 Protein Homology CDS 13850 14701 . - 0 ID=cds-WP_000516990.1;Parent=gene-AB11_RS24750;Dbxref=GenBank:WP_000516990.1;Name=WP_000516990.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710091.1;locus_tag=AB11_RS24750;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516990.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 14703 16169 . - . ID=gene-AB11_RS24755;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=AB11_RS24755;old_locus_tag=AB11_4797 NZ_JHDH01000172.1 Protein Homology CDS 14703 16169 . - 0 ID=cds-WP_001431542.1;Parent=gene-AB11_RS24755;Dbxref=GenBank:WP_001431542.1;Name=WP_001431542.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=AB11_RS24755;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_001431542.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 16166 17455 . - . ID=gene-AB11_RS24760;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=AB11_RS24760;old_locus_tag=AB11_4798 NZ_JHDH01000172.1 Protein Homology CDS 16166 17455 . - 0 ID=cds-WP_021571048.1;Parent=gene-AB11_RS24760;Dbxref=GenBank:WP_021571048.1;Name=WP_021571048.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710093.2;locus_tag=AB11_RS24760;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_021571048.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 17727 18173 . + . ID=gene-AB11_RS24765;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=AB11_RS24765;old_locus_tag=AB11_4800 NZ_JHDH01000172.1 Protein Homology CDS 17727 18173 . + 0 ID=cds-WP_000543916.1;Parent=gene-AB11_RS24765;Dbxref=GenBank:WP_000543916.1;Name=WP_000543916.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710094.1;locus_tag=AB11_RS24765;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543916.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 18292 19947 . + . ID=gene-AB11_RS24770;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AB11_RS24770;old_locus_tag=AB11_4801 NZ_JHDH01000172.1 Protein Homology CDS 18292 19947 . + 0 ID=cds-WP_000919549.1;Parent=gene-AB11_RS24770;Dbxref=GenBank:WP_000919549.1;Name=WP_000919549.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=AB11_RS24770;product=methyl-accepting chemotaxis protein;protein_id=WP_000919549.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 19990 21261 . - . ID=gene-AB11_RS24775;Name=AB11_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24775;old_locus_tag=AB11_4802 NZ_JHDH01000172.1 Protein Homology CDS 19990 21261 . - 0 ID=cds-WP_000118640.1;Parent=gene-AB11_RS24775;Dbxref=GenBank:WP_000118640.1;Name=WP_000118640.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118634.1;locus_tag=AB11_RS24775;product=TRAP transporter large permease;protein_id=WP_000118640.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 21258 21731 . - . ID=gene-AB11_RS24780;Name=AB11_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24780;old_locus_tag=AB11_4803 NZ_JHDH01000172.1 Protein Homology CDS 21258 21731 . - 0 ID=cds-WP_001235676.1;Parent=gene-AB11_RS24780;Dbxref=GenBank:WP_001235676.1;Name=WP_001235676.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235677.1;locus_tag=AB11_RS24780;product=TRAP transporter small permease;protein_id=WP_001235676.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 21795 22766 . - . ID=gene-AB11_RS24785;Name=AB11_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24785;old_locus_tag=AB11_4804 NZ_JHDH01000172.1 Protein Homology CDS 21795 22766 . - 0 ID=cds-WP_000034589.1;Parent=gene-AB11_RS24785;Dbxref=GenBank:WP_000034589.1;Name=WP_000034589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034588.1;locus_tag=AB11_RS24785;product=C4-dicarboxylate TRAP transporter substrate-binding protein;protein_id=WP_000034589.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 23445 25097 . + . ID=gene-AB11_RS24790;Name=AB11_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24790;old_locus_tag=AB11_4806 NZ_JHDH01000172.1 Protein Homology CDS 23445 25097 . + 0 ID=cds-WP_021571049.1;Parent=gene-AB11_RS24790;Dbxref=GenBank:WP_021571049.1;Name=WP_021571049.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542845.1;locus_tag=AB11_RS24790;product=Na+/H+ antiporter;protein_id=WP_021571049.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 25268 26173 . - . ID=gene-AB11_RS24795;Name=AB11_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24795;old_locus_tag=AB11_4807 NZ_JHDH01000172.1 Protein Homology CDS 25268 26173 . - 0 ID=cds-WP_032224192.1;Parent=gene-AB11_RS24795;Dbxref=GenBank:WP_032224192.1;Name=WP_032224192.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091590.1;locus_tag=AB11_RS24795;product=GntR family transcriptional regulator;protein_id=WP_032224192.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 26312 27334 . + . ID=gene-AB11_RS24800;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AB11_RS24800;old_locus_tag=AB11_4808 NZ_JHDH01000172.1 Protein Homology CDS 26312 27334 . + 0 ID=cds-WP_021571050.1;Parent=gene-AB11_RS24800;Dbxref=GenBank:WP_021571050.1;Name=WP_021571050.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AB11_RS24800;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_021571050.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 27474 29765 . - . ID=gene-AB11_RS24805;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AB11_RS24805;old_locus_tag=AB11_4809 NZ_JHDH01000172.1 Protein Homology CDS 27474 29765 . - 0 ID=cds-WP_001292621.1;Parent=gene-AB11_RS24805;Dbxref=GenBank:WP_001292621.1;Name=WP_001292621.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AB11_RS24805;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292621.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 30018 30512 . - . ID=gene-AB11_RS24810;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AB11_RS24810;old_locus_tag=AB11_4810 NZ_JHDH01000172.1 Protein Homology CDS 30018 30512 . - 0 ID=cds-WP_001308243.1;Parent=gene-AB11_RS24810;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AB11_RS24810;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 30561 31298 . - . ID=gene-AB11_RS24815;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AB11_RS24815;old_locus_tag=AB11_4811 NZ_JHDH01000172.1 Protein Homology CDS 30561 31298 . - 0 ID=cds-WP_000799911.1;Parent=gene-AB11_RS24815;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AB11_RS24815;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 31301 31840 . - . ID=gene-AB11_RS24820;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AB11_RS24820;old_locus_tag=AB11_4812 NZ_JHDH01000172.1 Protein Homology CDS 31301 31840 . - 0 ID=cds-WP_000098818.1;Parent=gene-AB11_RS24820;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AB11_RS24820;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 31947 32420 . - . ID=gene-AB11_RS24825;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AB11_RS24825;old_locus_tag=AB11_4813 NZ_JHDH01000172.1 Protein Homology CDS 31947 32420 . - 0 ID=cds-WP_000538188.1;Parent=gene-AB11_RS24825;Dbxref=GenBank:WP_000538188.1;Name=WP_000538188.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AB11_RS24825;product=threonine/serine exporter;protein_id=WP_000538188.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 32411 33181 . - . ID=gene-AB11_RS24830;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AB11_RS24830;old_locus_tag=AB11_4814 NZ_JHDH01000172.1 Protein Homology CDS 32411 33181 . - 0 ID=cds-WP_001341281.1;Parent=gene-AB11_RS24830;Dbxref=GenBank:WP_001341281.1;Name=WP_001341281.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AB11_RS24830;product=threonine/serine exporter family protein;protein_id=WP_001341281.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 33802 34527 . + . ID=gene-AB11_RS24835;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=AB11_RS24835;old_locus_tag=AB11_4815 NZ_JHDH01000172.1 Protein Homology CDS 33802 34527 . + 0 ID=cds-WP_000936635.1;Parent=gene-AB11_RS24835;Dbxref=GenBank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AB11_RS24835;product=helix-turn-helix domain-containing protein;protein_id=WP_000936635.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 34485 35162 . + . ID=gene-AB11_RS24840;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AB11_RS24840;old_locus_tag=AB11_4816 NZ_JHDH01000172.1 Protein Homology CDS 34485 35162 . + 0 ID=cds-WP_001300509.1;Parent=gene-AB11_RS24840;Dbxref=GenBank:WP_001300509.1;Name=WP_001300509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AB11_RS24840;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001300509.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 35200 35988 . - . ID=gene-AB11_RS24845;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AB11_RS24845;old_locus_tag=AB11_4817 NZ_JHDH01000172.1 Protein Homology CDS 35200 35988 . - 0 ID=cds-WP_000331559.1;Parent=gene-AB11_RS24845;Dbxref=GenBank:WP_000331559.1;Name=WP_000331559.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AB11_RS24845;product=siderophore-iron reductase FhuF;protein_id=WP_000331559.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 36129 36365 . + . ID=gene-AB11_RS24850;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=AB11_RS24850;old_locus_tag=AB11_4818 NZ_JHDH01000172.1 Protein Homology CDS 36129 36365 . + 0 ID=cds-WP_001403902.1;Parent=gene-AB11_RS24850;Dbxref=GenBank:WP_001403902.1;Name=WP_001403902.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AB11_RS24850;product=DUF1435 domain-containing protein;protein_id=WP_001403902.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 36404 36490 . - . ID=gene-AB11_RS24855;Name=AB11_RS24855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS24855;old_locus_tag=AB11_4819 NZ_JHDH01000172.1 tRNAscan-SE tRNA 36404 36490 . - . ID=rna-AB11_RS24855;Parent=gene-AB11_RS24855;anticodon=(pos:complement(36454..36456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24855;product=tRNA-Leu NZ_JHDH01000172.1 tRNAscan-SE exon 36404 36490 . - . ID=exon-AB11_RS24855-1;Parent=rna-AB11_RS24855;anticodon=(pos:complement(36454..36456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24855;product=tRNA-Leu NZ_JHDH01000172.1 RefSeq gene 36525 36611 . - . ID=gene-AB11_RS24860;Name=AB11_RS24860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS24860;old_locus_tag=AB11_4820 NZ_JHDH01000172.1 tRNAscan-SE tRNA 36525 36611 . - . ID=rna-AB11_RS24860;Parent=gene-AB11_RS24860;anticodon=(pos:complement(36575..36577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24860;product=tRNA-Leu NZ_JHDH01000172.1 tRNAscan-SE exon 36525 36611 . - . ID=exon-AB11_RS24860-1;Parent=rna-AB11_RS24860;anticodon=(pos:complement(36575..36577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24860;product=tRNA-Leu NZ_JHDH01000172.1 RefSeq gene 36640 36726 . - . ID=gene-AB11_RS24865;Name=AB11_RS24865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB11_RS24865;old_locus_tag=AB11_4821 NZ_JHDH01000172.1 tRNAscan-SE tRNA 36640 36726 . - . ID=rna-AB11_RS24865;Parent=gene-AB11_RS24865;anticodon=(pos:complement(36690..36692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24865;product=tRNA-Leu NZ_JHDH01000172.1 tRNAscan-SE exon 36640 36726 . - . ID=exon-AB11_RS24865-1;Parent=rna-AB11_RS24865;anticodon=(pos:complement(36690..36692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB11_RS24865;product=tRNA-Leu NZ_JHDH01000172.1 RefSeq gene 37027 38058 . - . ID=gene-AB11_RS24870;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AB11_RS24870;old_locus_tag=AB11_4822 NZ_JHDH01000172.1 Protein Homology CDS 37027 38058 . - 0 ID=cds-WP_001272337.1;Parent=gene-AB11_RS24870;Dbxref=GenBank:WP_001272337.1;Name=WP_001272337.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AB11_RS24870;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272337.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 38161 38574 . + . ID=gene-AB11_RS24875;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AB11_RS24875;old_locus_tag=AB11_4823 NZ_JHDH01000172.1 Protein Homology CDS 38161 38574 . + 0 ID=cds-WP_000204021.1;Parent=gene-AB11_RS24875;Dbxref=GenBank:WP_000204021.1;Name=WP_000204021.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AB11_RS24875;product=DNA polymerase III subunit psi;protein_id=WP_000204021.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 38543 38989 . + . ID=gene-AB11_RS24880;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AB11_RS24880;old_locus_tag=AB11_4824 NZ_JHDH01000172.1 Protein Homology CDS 38543 38989 . + 0 ID=cds-WP_001092461.1;Parent=gene-AB11_RS24880;Dbxref=GenBank:WP_001092461.1;Name=WP_001092461.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AB11_RS24880;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 39004 39681 . + . ID=gene-AB11_RS24885;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AB11_RS24885;old_locus_tag=AB11_4825 NZ_JHDH01000172.1 Protein Homology CDS 39004 39681 . + 0 ID=cds-WP_000870700.1;Parent=gene-AB11_RS24885;Dbxref=GenBank:WP_000870700.1;Name=WP_000870700.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710113.1;locus_tag=AB11_RS24885;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870700.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 39772 41361 . + . ID=gene-AB11_RS24890;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AB11_RS24890;old_locus_tag=AB11_4826 NZ_JHDH01000172.1 Protein Homology CDS 39772 41361 . + 0 ID=cds-WP_000175943.1;Parent=gene-AB11_RS24890;Dbxref=GenBank:WP_000175943.1;Name=WP_000175943.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AB11_RS24890;product=peptide chain release factor 3;protein_id=WP_000175943.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 41754 42359 . + . ID=gene-AB11_RS24895;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AB11_RS24895;old_locus_tag=AB11_4827 NZ_JHDH01000172.1 Protein Homology CDS 41754 42359 . + 0 ID=cds-WP_001295748.1;Parent=gene-AB11_RS24895;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AB11_RS24895;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 42486 42647 . + . ID=gene-AB11_RS24900;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AB11_RS24900;old_locus_tag=AB11_4828 NZ_JHDH01000172.1 Protein Homology CDS 42486 42647 . + 0 ID=cds-WP_000490275.1;Parent=gene-AB11_RS24900;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AB11_RS24900;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 42769 43842 . + . ID=gene-AB11_RS24905;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AB11_RS24905;old_locus_tag=AB11_4829 NZ_JHDH01000172.1 Protein Homology CDS 42769 43842 . + 0 ID=cds-WP_001428864.1;Parent=gene-AB11_RS24905;Dbxref=GenBank:WP_001428864.1;Name=WP_001428864.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AB11_RS24905;product=patatin-like phospholipase family protein;protein_id=WP_001428864.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 43839 44621 . + . ID=gene-AB11_RS24910;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AB11_RS24910;old_locus_tag=AB11_4830 NZ_JHDH01000172.1 Protein Homology CDS 43839 44621 . + 0 ID=cds-WP_000563058.1;Parent=gene-AB11_RS24910;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AB11_RS24910;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 45239 46102 . - . ID=gene-AB11_RS24915;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AB11_RS24915;old_locus_tag=AB11_4831 NZ_JHDH01000172.1 Protein Homology CDS 45239 46102 . - 0 ID=cds-WP_001088439.1;Parent=gene-AB11_RS24915;Dbxref=GenBank:WP_001088439.1;Name=WP_001088439.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB11_RS24915;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088439.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 46074 47624 . - . ID=gene-AB11_RS24920;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AB11_RS24920;old_locus_tag=AB11_4832 NZ_JHDH01000172.1 Protein Homology CDS 46074 47624 . - 0 ID=cds-WP_001143194.1;Parent=gene-AB11_RS24920;Dbxref=GenBank:WP_001143194.1;Name=WP_001143194.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AB11_RS24920;product=YjjI family glycine radical enzyme;protein_id=WP_001143194.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 47882 48661 . + . ID=gene-AB11_RS24925;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AB11_RS24925;old_locus_tag=AB11_4834 NZ_JHDH01000172.1 Protein Homology CDS 47882 48661 . + 0 ID=cds-WP_001295412.1;Parent=gene-AB11_RS24925;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AB11_RS24925;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 48788 50110 . + . ID=gene-AB11_RS24930;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AB11_RS24930;old_locus_tag=AB11_4835 NZ_JHDH01000172.1 Protein Homology CDS 48788 50110 . + 0 ID=cds-WP_000477811.1;Parent=gene-AB11_RS24930;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AB11_RS24930;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 50162 51385 . + . ID=gene-AB11_RS24935;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AB11_RS24935;old_locus_tag=AB11_4836 NZ_JHDH01000172.1 Protein Homology CDS 50162 51385 . + 0 ID=cds-WP_000816480.1;Parent=gene-AB11_RS24935;Dbxref=GenBank:WP_000816480.1;Name=WP_000816480.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AB11_RS24935;product=phosphopentomutase;protein_id=WP_000816480.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 51465 52184 . + . ID=gene-AB11_RS24940;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AB11_RS24940;old_locus_tag=AB11_4837 NZ_JHDH01000172.1 Protein Homology CDS 51465 52184 . + 0 ID=cds-WP_000224879.1;Parent=gene-AB11_RS24940;Dbxref=GenBank:WP_000224879.1;Name=WP_000224879.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710124.2;locus_tag=AB11_RS24940;product=purine-nucleoside phosphorylase;protein_id=WP_000224879.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 52345 52608 . - . ID=gene-AB11_RS24945;Name=AB11_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS24945;old_locus_tag=AB11_4838 NZ_JHDH01000172.1 Protein Homology CDS 52345 52608 . - 0 ID=cds-WP_000566155.1;Parent=gene-AB11_RS24945;Dbxref=GenBank:WP_000566155.1;Name=WP_000566155.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AB11_RS24945;product=helix-turn-helix domain-containing protein;protein_id=WP_000566155.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 52640 53656 . - . ID=gene-AB11_RS24950;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AB11_RS24950;old_locus_tag=AB11_4839 NZ_JHDH01000172.1 Protein Homology CDS 52640 53656 . - 0 ID=cds-WP_000105890.1;Parent=gene-AB11_RS24950;Dbxref=GenBank:WP_000105890.1;Name=WP_000105890.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AB11_RS24950;product=lipoate--protein ligase LplA;protein_id=WP_000105890.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 53684 54328 . - . ID=gene-AB11_RS24955;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AB11_RS24955;old_locus_tag=AB11_4840 NZ_JHDH01000172.1 Protein Homology CDS 53684 54328 . - 0 ID=cds-WP_000124615.1;Parent=gene-AB11_RS24955;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AB11_RS24955;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 54434 55402 . + . ID=gene-AB11_RS24960;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AB11_RS24960;old_locus_tag=AB11_4841 NZ_JHDH01000172.1 Protein Homology CDS 54434 55402 . + 0 ID=cds-WP_001132956.1;Parent=gene-AB11_RS24960;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AB11_RS24960;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 55451 56833 . + . ID=gene-AB11_RS24965;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AB11_RS24965;old_locus_tag=AB11_4842 NZ_JHDH01000172.1 Protein Homology CDS 55451 56833 . + 0 ID=cds-WP_001029698.1;Parent=gene-AB11_RS24965;Dbxref=GenBank:WP_001029698.1;Name=WP_001029698.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AB11_RS24965;product=DNA repair protein RadA;protein_id=WP_001029698.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 56854 58086 . + . ID=gene-AB11_RS24970;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AB11_RS24970;old_locus_tag=AB11_4843 NZ_JHDH01000172.1 Protein Homology CDS 56854 58086 . + 0 ID=cds-WP_000093813.1;Parent=gene-AB11_RS24970;Dbxref=GenBank:WP_000093813.1;Name=WP_000093813.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AB11_RS24970;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093813.1;transl_table=11 NZ_JHDH01000172.1 RefSeq pseudogene 58137 58232 . + . ID=gene-AB11_RS26270;Name=AB11_RS26270;end_range=58232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB11_RS26270;partial=true;pseudo=true NZ_JHDH01000172.1 Protein Homology CDS 58137 58232 . + 0 ID=cds-AB11_RS26270;Parent=gene-AB11_RS26270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=58232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007436.1;locus_tag=AB11_RS26270;partial=true;product=NadS family protein;pseudo=true;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 58393 60060 . - . ID=gene-AB11_RS24975;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AB11_RS24975;old_locus_tag=AB11_4844 NZ_JHDH01000172.1 Protein Homology CDS 58393 60060 . - 0 ID=cds-WP_001482020.1;Parent=gene-AB11_RS24975;Dbxref=GenBank:WP_001482020.1;Name=WP_001482020.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AB11_RS24975;product=energy-dependent translational throttle protein EttA;protein_id=WP_001482020.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 60271 62208 . + . ID=gene-AB11_RS24980;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AB11_RS24980;old_locus_tag=AB11_4845 NZ_JHDH01000172.1 Protein Homology CDS 60271 62208 . + 0 ID=cds-WP_000409442.1;Parent=gene-AB11_RS24980;Dbxref=GenBank:WP_000409442.1;Name=WP_000409442.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AB11_RS24980;product=murein transglycosylase;protein_id=WP_000409442.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 62298 62624 . + . ID=gene-AB11_RS24985;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AB11_RS24985;old_locus_tag=AB11_4846 NZ_JHDH01000172.1 Protein Homology CDS 62298 62624 . + 0 ID=cds-WP_000068679.1;Parent=gene-AB11_RS24985;Dbxref=GenBank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AB11_RS24985;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 62709 63230 . - . ID=gene-AB11_RS24990;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AB11_RS24990;old_locus_tag=AB11_4847 NZ_JHDH01000172.1 Protein Homology CDS 62709 63230 . - 0 ID=cds-WP_001341279.1;Parent=gene-AB11_RS24990;Dbxref=GenBank:WP_001341279.1;Name=WP_001341279.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649724.1;locus_tag=AB11_RS24990;product=inosine/xanthosine triphosphatase;protein_id=WP_001341279.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 63282 63929 . + . ID=gene-AB11_RS24995;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AB11_RS24995;old_locus_tag=AB11_4848 NZ_JHDH01000172.1 Protein Homology CDS 63282 63929 . + 0 ID=cds-WP_000942344.1;Parent=gene-AB11_RS24995;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AB11_RS24995;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 63926 64795 . - . ID=gene-AB11_RS25000;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AB11_RS25000;old_locus_tag=AB11_4849 NZ_JHDH01000172.1 Protein Homology CDS 63926 64795 . - 0 ID=cds-WP_000371666.1;Parent=gene-AB11_RS25000;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AB11_RS25000;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 65006 65479 . + . ID=gene-AB11_RS25005;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AB11_RS25005;old_locus_tag=AB11_4850 NZ_JHDH01000172.1 Protein Homology CDS 65006 65479 . + 0 ID=cds-WP_000875487.1;Parent=gene-AB11_RS25005;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AB11_RS25005;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 65492 66181 . + . ID=gene-AB11_RS25010;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AB11_RS25010;old_locus_tag=AB11_4851 NZ_JHDH01000172.1 Protein Homology CDS 65492 66181 . + 0 ID=cds-WP_001188664.1;Parent=gene-AB11_RS25010;Dbxref=GenBank:WP_001188664.1;Name=WP_001188664.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AB11_RS25010;product=two-component system response regulator CreB;protein_id=WP_001188664.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 66181 67605 . + . ID=gene-AB11_RS25015;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AB11_RS25015;old_locus_tag=AB11_4852 NZ_JHDH01000172.1 Protein Homology CDS 66181 67605 . + 0 ID=cds-WP_001219614.1;Parent=gene-AB11_RS25015;Dbxref=GenBank:WP_001219614.1;Name=WP_001219614.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AB11_RS25015;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219614.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 67663 69015 . + . ID=gene-AB11_RS25020;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AB11_RS25020;old_locus_tag=AB11_4853 NZ_JHDH01000172.1 Protein Homology CDS 67663 69015 . + 0 ID=cds-WP_000920337.1;Parent=gene-AB11_RS25020;Dbxref=GenBank:WP_000920337.1;Name=WP_000920337.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710138.1;locus_tag=AB11_RS25020;product=cell envelope integrity protein CreD;protein_id=WP_000920337.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 69075 69791 . - . ID=gene-AB11_RS25025;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AB11_RS25025;old_locus_tag=AB11_4854 NZ_JHDH01000172.1 Protein Homology CDS 69075 69791 . - 0 ID=cds-WP_001194358.1;Parent=gene-AB11_RS25025;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AB11_RS25025;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 69887 70027 . + . ID=gene-AB11_RS25030;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AB11_RS25030 NZ_JHDH01000172.1 Protein Homology CDS 69887 70027 . + 0 ID=cds-WP_001303782.1;Parent=gene-AB11_RS25030;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AB11_RS25030;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 70427 71113 . + . ID=gene-AB11_RS25035;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AB11_RS25035;old_locus_tag=AB11_4855 NZ_JHDH01000172.1 Protein Homology CDS 70427 71113 . + 0 ID=cds-WP_001223167.1;Parent=gene-AB11_RS25035;Dbxref=GenBank:WP_001223167.1;Name=WP_001223167.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=AB11_RS25035;product=tRNA/rRNA methyltransferase;protein_id=WP_001223167.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 71327 71392 . + . ID=gene-AB11_RS25040;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AB11_RS25040 NZ_JHDH01000172.1 Protein Homology CDS 71327 71392 . + 0 ID=cds-WP_001386572.1;Parent=gene-AB11_RS25040;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AB11_RS25040;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JHDH01000172.1 cmsearch sequence_feature 71328 71447 . + . ID=id-NZ_JHDH01000172.1:71328..71447;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDH01000172.1 RefSeq gene 71473 73935 . + . ID=gene-AB11_RS25045;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AB11_RS25045;old_locus_tag=AB11_4856 NZ_JHDH01000172.1 Protein Homology CDS 71473 73935 . + 0 ID=cds-WP_001264697.1;Parent=gene-AB11_RS25045;Dbxref=GenBank:WP_001264697.1;Name=WP_001264697.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AB11_RS25045;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264697.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 73937 74869 . + . ID=gene-AB11_RS25050;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AB11_RS25050;old_locus_tag=AB11_4857 NZ_JHDH01000172.1 Protein Homology CDS 73937 74869 . + 0 ID=cds-WP_000241660.1;Parent=gene-AB11_RS25050;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AB11_RS25050;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 74870 76156 . + . ID=gene-AB11_RS25055;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AB11_RS25055;old_locus_tag=AB11_4858 NZ_JHDH01000172.1 Protein Homology CDS 74870 76156 . + 0 ID=cds-WP_001637140.1;Parent=gene-AB11_RS25055;Dbxref=GenBank:WP_001637140.1;Name=WP_001637140.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AB11_RS25055;product=threonine synthase;protein_id=WP_001637140.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 76370 76666 . + . ID=gene-AB11_RS25060;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AB11_RS25060;old_locus_tag=AB11_4859 NZ_JHDH01000172.1 Protein Homology CDS 76370 76666 . + 0 ID=cds-WP_000738721.1;Parent=gene-AB11_RS25060;Dbxref=GenBank:WP_000738721.1;Name=WP_000738721.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308032.1;locus_tag=AB11_RS25060;product=DUF2502 domain-containing protein;protein_id=WP_000738721.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 76819 77595 . - . ID=gene-AB11_RS25065;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AB11_RS25065;old_locus_tag=AB11_4860 NZ_JHDH01000172.1 Protein Homology CDS 76819 77595 . - 0 ID=cds-WP_000906203.1;Parent=gene-AB11_RS25065;Dbxref=GenBank:WP_000906203.1;Name=WP_000906203.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AB11_RS25065;product=peroxide stress protein YaaA;protein_id=WP_000906203.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 77665 79095 . - . ID=gene-AB11_RS25070;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AB11_RS25070;old_locus_tag=AB11_4861 NZ_JHDH01000172.1 Protein Homology CDS 77665 79095 . - 0 ID=cds-WP_001112563.1;Parent=gene-AB11_RS25070;Dbxref=GenBank:WP_001112563.1;Name=WP_001112563.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AB11_RS25070;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112563.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 79374 80327 . + . ID=gene-AB11_RS25075;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB11_RS25075;old_locus_tag=AB11_4862 NZ_JHDH01000172.1 Protein Homology CDS 79374 80327 . + 0 ID=cds-WP_032224196.1;Parent=gene-AB11_RS25075;Dbxref=GenBank:WP_032224196.1;Name=WP_032224196.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AB11_RS25075;product=transaldolase;protein_id=WP_032224196.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 80442 81029 . + . ID=gene-AB11_RS25080;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AB11_RS25080;old_locus_tag=AB11_4863 NZ_JHDH01000172.1 Protein Homology CDS 80442 81029 . + 0 ID=cds-WP_001094682.1;Parent=gene-AB11_RS25080;Dbxref=GenBank:WP_001094682.1;Name=WP_001094682.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AB11_RS25080;product=molybdopterin adenylyltransferase;protein_id=WP_001094682.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 81064 81630 . - . ID=gene-AB11_RS25085;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AB11_RS25085;old_locus_tag=AB11_4864 NZ_JHDH01000172.1 Protein Homology CDS 81064 81630 . - 0 ID=cds-WP_000528538.1;Parent=gene-AB11_RS25085;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AB11_RS25085;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 81779 82492 . - . ID=gene-AB11_RS25090;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AB11_RS25090;old_locus_tag=AB11_4865 NZ_JHDH01000172.1 Protein Homology CDS 81779 82492 . - 0 ID=cds-WP_032224198.1;Parent=gene-AB11_RS25090;Dbxref=GenBank:WP_032224198.1;Name=WP_032224198.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AB11_RS25090;product=acidic protein MsyB;protein_id=WP_032224198.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 82518 82922 . - . ID=gene-AB11_RS25095;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AB11_RS25095;old_locus_tag=AB11_4866 NZ_JHDH01000172.1 Protein Homology CDS 82518 82922 . - 0 ID=cds-WP_000843568.1;Parent=gene-AB11_RS25095;Dbxref=GenBank:WP_000843568.1;Name=WP_000843568.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AB11_RS25095;product=DUF2541 family protein;protein_id=WP_000843568.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 83299 85215 . + . ID=gene-AB11_RS25100;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AB11_RS25100;old_locus_tag=AB11_4867 NZ_JHDH01000172.1 Protein Homology CDS 83299 85215 . + 0 ID=cds-WP_000516135.1;Parent=gene-AB11_RS25100;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AB11_RS25100;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 85304 86434 . + . ID=gene-AB11_RS25105;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AB11_RS25105;old_locus_tag=AB11_4868 NZ_JHDH01000172.1 Protein Homology CDS 85304 86434 . + 0 ID=cds-WP_001118464.1;Parent=gene-AB11_RS25105;Dbxref=GenBank:WP_001118464.1;Name=WP_001118464.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AB11_RS25105;product=molecular chaperone DnaJ;protein_id=WP_001118464.1;transl_table=11 NZ_JHDH01000172.1 RefSeq gene 86581 87693 . + . ID=gene-AB11_RS25110;Name=AB11_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB11_RS25110;old_locus_tag=AB11_4869 NZ_JHDH01000172.1 Protein Homology CDS 86581 87693 . + 0 ID=cds-WP_032222612.1-8;Parent=gene-AB11_RS25110;Dbxref=GenBank:WP_032222612.1;Name=WP_032222612.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB11_RS25110;product=IS4-like element IS421 family transposase;protein_id=WP_032222612.1;transl_table=11 ###