##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM60129v1 #!genome-build-accession NCBI_Assembly:GCF_000601295.1 #!annotation-date 06/14/2025 09:55:01 #!annotation-source NCBI RefSeq GCF_000601295.1-RS_2025_06_14 ##sequence-region NZ_JHDO01000001.1 1 15423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000001.1 RefSeq region 1 15423 . + . ID=NZ_JHDO01000001.1:1..15423;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000001.1 RefSeq gene 1 174 . + . ID=gene-AB69_RS23060;Name=AB69_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23060;old_locus_tag=AB69_4822;partial=true;start_range=.,1 NZ_JHDO01000001.1 Protein Homology CDS 1 174 . + 0 ID=cds-WP_000112789.1;Parent=gene-AB69_RS23060;Dbxref=GenBank:WP_000112789.1;Name=WP_000112789.1;Ontology_term=GO:0042586;gbkey=CDS;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AB69_RS23060;partial=true;product=peptide deformylase;protein_id=WP_000112789.1;start_range=.,1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 189 290 . + . ID=gene-AB69_RS25815;Name=fmt;end_range=290,.;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=AB69_RS25815;old_locus_tag=AB69_4823;partial=true;pseudo=true NZ_JHDO01000001.1 Protein Homology CDS 189 290 . + 0 ID=cds-AB69_RS25815;Parent=gene-AB69_RS25815;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=290,.;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=AB69_RS25815;partial=true;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 487 678 . + . ID=gene-AB69_RS0123065;Name=AB69_RS0123065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123065 NZ_JHDO01000001.1 Protein Homology CDS 487 678 . + 0 ID=cds-WP_000175572.1;Parent=gene-AB69_RS0123065;Dbxref=GenBank:WP_000175572.1;Name=WP_000175572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703021.1;locus_tag=AB69_RS0123065;product=DUF2164 family protein;protein_id=WP_000175572.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 675 1037 . + . ID=gene-AB69_RS0123070;Name=AB69_RS0123070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123070;old_locus_tag=AB69_4824 NZ_JHDO01000001.1 Protein Homology CDS 675 1037 . + 0 ID=cds-WP_000181069.1;Parent=gene-AB69_RS0123070;Dbxref=GenBank:WP_000181069.1;Name=WP_000181069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547178.1;locus_tag=AB69_RS0123070;product=hypothetical protein;protein_id=WP_000181069.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 1370 1897 . - . ID=gene-AB69_RS23055;Name=AB69_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23055;old_locus_tag=AB69_4826 NZ_JHDO01000001.1 Protein Homology CDS 1370 1897 . - 0 ID=cds-WP_001196880.1;Parent=gene-AB69_RS23055;Dbxref=GenBank:WP_001196880.1;Name=WP_001196880.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669399.1;locus_tag=AB69_RS23055;product=DoxX family protein;protein_id=WP_001196880.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 1899 2657 . - . ID=gene-AB69_RS23050;Name=AB69_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23050;old_locus_tag=AB69_4827 NZ_JHDO01000001.1 Protein Homology CDS 1899 2657 . - 0 ID=cds-WP_001181584.1;Parent=gene-AB69_RS23050;Dbxref=GenBank:WP_001181584.1;Name=WP_001181584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579652.1;locus_tag=AB69_RS23050;product=HvfC/BufC N-terminal domain-containing protein;protein_id=WP_001181584.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 2626 3552 . - . ID=gene-AB69_RS23045;Name=bufB;gbkey=Gene;gene=bufB;gene_biotype=protein_coding;locus_tag=AB69_RS23045;old_locus_tag=AB69_4828 NZ_JHDO01000001.1 Protein Homology CDS 2626 3552 . - 0 ID=cds-WP_000989040.1;Parent=gene-AB69_RS23045;Dbxref=GenBank:WP_000989040.1;Name=WP_000989040.1;gbkey=CDS;gene=bufB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001606186.1;locus_tag=AB69_RS23045;product=MNIO family bufferin maturase;protein_id=WP_000989040.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 3584 3874 . - . ID=gene-AB69_RS23040;Name=AB69_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23040;old_locus_tag=AB69_4829 NZ_JHDO01000001.1 Protein Homology CDS 3584 3874 . - 0 ID=cds-WP_000754127.1;Parent=gene-AB69_RS23040;Dbxref=GenBank:WP_000754127.1;Name=WP_000754127.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754125.1;locus_tag=AB69_RS23040;product=BufA1 family periplasmic bufferin-type metallophore;protein_id=WP_000754127.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 4164 4721 . - . ID=gene-AB69_RS23035;Name=AB69_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23035;old_locus_tag=AB69_4830 NZ_JHDO01000001.1 Protein Homology CDS 4164 4721 . - 0 ID=cds-WP_000103553.1;Parent=gene-AB69_RS23035;Dbxref=GenBank:WP_000103553.1;Name=WP_000103553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584765.1;locus_tag=AB69_RS23035;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000103553.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 5460 5927 . + . ID=gene-AB69_RS30080;Name=AB69_RS30080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30080 NZ_JHDO01000001.1 GeneMarkS-2+ CDS 5460 5927 . + 0 ID=cds-WP_011387706.1;Parent=gene-AB69_RS30080;Dbxref=GenBank:WP_011387706.1;Name=WP_011387706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30080;product=hypothetical protein;protein_id=WP_011387706.1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 5995 6114 . - . ID=gene-AB69_RS25825;Name=AB69_RS25825;end_range=6114,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS25825;partial=true;pseudo=true NZ_JHDO01000001.1 Protein Homology CDS 5995 6114 . - 0 ID=cds-AB69_RS25825;Parent=gene-AB69_RS25825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB69_RS25825;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 6317 7297 . + . ID=gene-AB69_RS23025;Name=AB69_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23025;old_locus_tag=AB69_4833 NZ_JHDO01000001.1 Protein Homology CDS 6317 7297 . + 0 ID=cds-WP_001218105.1;Parent=gene-AB69_RS23025;Dbxref=GenBank:WP_001218105.1;Name=WP_001218105.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=AB69_RS23025;product=plasmid segregation protein ParM;protein_id=WP_001218105.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 7300 7722 . + . ID=gene-AB69_RS23020;Name=AB69_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23020;old_locus_tag=AB69_4834 NZ_JHDO01000001.1 Protein Homology CDS 7300 7722 . + 0 ID=cds-WP_000774834.1;Parent=gene-AB69_RS23020;Dbxref=GenBank:WP_000774834.1;Name=WP_000774834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=AB69_RS23020;product=plasmid partitioning/stability family protein;protein_id=WP_000774834.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 7746 8036 . + . ID=gene-AB69_RS28200;Name=AB69_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28200 NZ_JHDO01000001.1 Protein Homology CDS 7746 8036 . + 0 ID=cds-WP_032141698.1;Parent=gene-AB69_RS28200;Dbxref=GenBank:WP_032141698.1;Name=WP_032141698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AB69_RS28200;product=hypothetical protein;protein_id=WP_032141698.1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 8146 8241 . + . ID=gene-AB69_RS30085;Name=AB69_RS30085;end_range=8241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30085;old_locus_tag=AB69_4836;partial=true;pseudo=true NZ_JHDO01000001.1 Protein Homology CDS 8146 8241 . + 0 ID=cds-AB69_RS30085;Parent=gene-AB69_RS30085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AB69_RS30085;partial=true;product=DUF1281 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 8241 8546 . + . ID=gene-AB69_RS23015;Name=AB69_RS23015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS23015;old_locus_tag=AB69_4837;partial=true;pseudo=true;start_range=.,8241 NZ_JHDO01000001.1 Protein Homology CDS 8241 8546 . + 0 ID=cds-AB69_RS23015;Parent=gene-AB69_RS23015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AB69_RS23015;partial=true;product=DUF3560 domain-containing protein;pseudo=true;start_range=.,8241;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 8593 9156 . + . ID=gene-AB69_RS23010;Name=AB69_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23010;old_locus_tag=AB69_4838 NZ_JHDO01000001.1 Protein Homology CDS 8593 9156 . + 0 ID=cds-WP_001297832.1;Parent=gene-AB69_RS23010;Dbxref=GenBank:WP_001297832.1;Name=WP_001297832.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AB69_RS23010;product=methyltransferase;protein_id=WP_001297832.1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 9164 9373 . + . ID=gene-AB69_RS30090;Name=AB69_RS30090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30090;old_locus_tag=AB69_4839;partial=true;pseudo=true;start_range=.,9164 NZ_JHDO01000001.1 Protein Homology CDS 9164 9373 . + 0 ID=cds-AB69_RS30090;Parent=gene-AB69_RS30090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901240.1;locus_tag=AB69_RS30090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9164;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 9307 9543 . + . ID=gene-AB69_RS25840;Name=AB69_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS25840 NZ_JHDO01000001.1 Protein Homology CDS 9307 9543 . + 0 ID=cds-WP_071594222.1;Parent=gene-AB69_RS25840;Dbxref=GenBank:WP_071594222.1;Name=WP_071594222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001380705.1;locus_tag=AB69_RS25840;product=hypothetical protein;protein_id=WP_071594222.1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 9540 9714 . - . ID=gene-AB69_RS30750;Name=AB69_RS30750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30750;partial=true;pseudo=true;start_range=.,9540 NZ_JHDO01000001.1 Protein Homology CDS 9540 9714 . - 0 ID=cds-AB69_RS30750;Parent=gene-AB69_RS30750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB69_RS30750;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9540;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 9785 9990 . + . ID=gene-AB69_RS30755;Name=AB69_RS30755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30755;pseudo=true NZ_JHDO01000001.1 Protein Homology CDS 9785 9990 . + 0 ID=cds-AB69_RS30755;Parent=gene-AB69_RS30755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB69_RS30755;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 10016 10543 . + . ID=gene-AB69_RS23005;Name=AB69_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23005;old_locus_tag=AB69_4840 NZ_JHDO01000001.1 Protein Homology CDS 10016 10543 . + 0 ID=cds-WP_000290853.1;Parent=gene-AB69_RS23005;Dbxref=GenBank:WP_000290853.1;Name=WP_000290853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276102.1;locus_tag=AB69_RS23005;product=single-stranded DNA-binding protein;protein_id=WP_000290853.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 10601 10834 . + . ID=gene-AB69_RS23000;Name=AB69_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS23000;old_locus_tag=AB69_4841 NZ_JHDO01000001.1 Protein Homology CDS 10601 10834 . + 0 ID=cds-WP_000006028.1;Parent=gene-AB69_RS23000;Dbxref=GenBank:WP_000006028.1;Name=WP_000006028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AB69_RS23000;product=DUF905 family protein;protein_id=WP_000006028.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 10895 12859 . + . ID=gene-AB69_RS22995;Name=AB69_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22995;old_locus_tag=AB69_4842 NZ_JHDO01000001.1 Protein Homology CDS 10895 12859 . + 0 ID=cds-WP_000117104.1;Parent=gene-AB69_RS22995;Dbxref=GenBank:WP_000117104.1;Name=WP_000117104.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AB69_RS22995;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000117104.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 12914 13348 . + . ID=gene-AB69_RS22990;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AB69_RS22990;old_locus_tag=AB69_4843 NZ_JHDO01000001.1 Protein Homology CDS 12914 13348 . + 0 ID=cds-WP_000845955.1;Parent=gene-AB69_RS22990;Dbxref=GenBank:WP_000845955.1;Name=WP_000845955.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052658.1;locus_tag=AB69_RS22990;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845955.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 13345 14064 . + . ID=gene-AB69_RS22985;Name=AB69_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22985;old_locus_tag=AB69_4844 NZ_JHDO01000001.1 Protein Homology CDS 13345 14064 . + 0 ID=cds-WP_001276221.1;Parent=gene-AB69_RS22985;Dbxref=GenBank:WP_001276221.1;Name=WP_001276221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763821.1;locus_tag=AB69_RS22985;product=plasmid SOS inhibition protein A;protein_id=WP_001276221.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 14061 14375 . + . ID=gene-AB69_RS22980;Name=AB69_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22980;old_locus_tag=AB69_4845 NZ_JHDO01000001.1 Protein Homology CDS 14061 14375 . + 0 ID=cds-WP_000872086.1;Parent=gene-AB69_RS22980;Dbxref=GenBank:WP_000872086.1;Name=WP_000872086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562885.1;locus_tag=AB69_RS22980;product=hypothetical protein;protein_id=WP_000872086.1;transl_table=11 NZ_JHDO01000001.1 RefSeq pseudogene 14525 14677 . + . ID=gene-AB69_RS30095;Name=AB69_RS30095;end_range=14677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30095;partial=true;pseudo=true NZ_JHDO01000001.1 Protein Homology CDS 14525 14677 . + 0 ID=cds-AB69_RS30095;Parent=gene-AB69_RS30095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14677,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AB69_RS30095;partial=true;product=DUF5431 family protein;pseudo=true;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 14622 14744 . + . ID=gene-AB69_RS0123085;Name=AB69_RS0123085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123085 NZ_JHDO01000001.1 Protein Homology CDS 14622 14744 . + 0 ID=cds-WP_223163518.1;Parent=gene-AB69_RS0123085;Dbxref=GenBank:WP_223163518.1;Name=WP_223163518.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=AB69_RS0123085;product=Hok/Gef family protein;protein_id=WP_223163518.1;transl_table=11 NZ_JHDO01000001.1 RefSeq gene 14982 15317 . - . ID=gene-AB69_RS29910;Name=AB69_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29910 NZ_JHDO01000001.1 Protein Homology CDS 14982 15317 . - 0 ID=cds-WP_001381224.1;Parent=gene-AB69_RS29910;Dbxref=GenBank:WP_001381224.1;Name=WP_001381224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355714.1;locus_tag=AB69_RS29910;product=hypothetical protein;protein_id=WP_001381224.1;transl_table=11 ##sequence-region NZ_JHDO01000002.1 1 4092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000002.1 RefSeq region 1 4092 . + . ID=NZ_JHDO01000002.1:1..4092;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000002.1 RefSeq pseudogene 1 266 . + . ID=gene-AB69_RS22975;Name=AB69_RS22975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22975;old_locus_tag=AB69_4847;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000002.1 Protein Homology CDS 1 266 . + 2 ID=cds-AB69_RS22975;Parent=gene-AB69_RS22975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AB69_RS22975;partial=true;product=respiratory nitrate reductase subunit beta;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000002.1 RefSeq gene 263 973 . + . ID=gene-AB69_RS22970;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AB69_RS22970;old_locus_tag=AB69_4848 NZ_JHDO01000002.1 Protein Homology CDS 263 973 . + 0 ID=cds-WP_000571681.1;Parent=gene-AB69_RS22970;Dbxref=GenBank:WP_000571681.1;Name=WP_000571681.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AB69_RS22970;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571681.1;transl_table=11 NZ_JHDO01000002.1 RefSeq gene 973 1650 . + . ID=gene-AB69_RS22965;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB69_RS22965;old_locus_tag=AB69_4849 NZ_JHDO01000002.1 Protein Homology CDS 973 1650 . + 0 ID=cds-WP_001160110.1;Parent=gene-AB69_RS22965;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AB69_RS22965;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JHDO01000002.1 RefSeq gene 1834 1965 . - . ID=gene-AB69_RS25580;Name=AB69_RS25580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25580 NZ_JHDO01000002.1 cmsearch ncRNA 1834 1965 . - . ID=rna-AB69_RS25580;Parent=gene-AB69_RS25580;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25580;product=RtT sRNA NZ_JHDO01000002.1 cmsearch exon 1834 1965 . - . ID=exon-AB69_RS25580-1;Parent=rna-AB69_RS25580;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25580;product=RtT sRNA NZ_JHDO01000002.1 RefSeq gene 2012 2143 . - . ID=gene-AB69_RS25585;Name=AB69_RS25585;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25585 NZ_JHDO01000002.1 cmsearch ncRNA 2012 2143 . - . ID=rna-AB69_RS25585;Parent=gene-AB69_RS25585;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25585;product=RtT sRNA NZ_JHDO01000002.1 cmsearch exon 2012 2143 . - . ID=exon-AB69_RS25585-1;Parent=rna-AB69_RS25585;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25585;product=RtT sRNA NZ_JHDO01000002.1 RefSeq gene 2190 2274 . - . ID=gene-AB69_RS22960;Name=AB69_RS22960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22960;old_locus_tag=AB69_4850 NZ_JHDO01000002.1 tRNAscan-SE tRNA 2190 2274 . - . ID=rna-AB69_RS22960;Parent=gene-AB69_RS22960;anticodon=(pos:complement(2238..2240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22960;product=tRNA-Tyr NZ_JHDO01000002.1 tRNAscan-SE exon 2190 2274 . - . ID=exon-AB69_RS22960-1;Parent=rna-AB69_RS22960;anticodon=(pos:complement(2238..2240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22960;product=tRNA-Tyr NZ_JHDO01000002.1 RefSeq gene 2434 3276 . - . ID=gene-AB69_RS22955;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AB69_RS22955;old_locus_tag=AB69_4851 NZ_JHDO01000002.1 Protein Homology CDS 2434 3276 . - 0 ID=cds-WP_000555857.1;Parent=gene-AB69_RS22955;Dbxref=GenBank:WP_000555857.1;Name=WP_000555857.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AB69_RS22955;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JHDO01000002.1 RefSeq gene 3326 3784 . - . ID=gene-AB69_RS0123105;Name=AB69_RS0123105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123105;old_locus_tag=AB69_4852 NZ_JHDO01000002.1 Protein Homology CDS 3326 3784 . - 0 ID=cds-WP_001307143.1;Parent=gene-AB69_RS0123105;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AB69_RS0123105;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JHDO01000002.1 RefSeq gene 3897 4092 . + . ID=gene-AB69_RS22950;Name=AB69_RS22950;end_range=4092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22950;old_locus_tag=AB69_4853;partial=true NZ_JHDO01000002.1 Protein Homology CDS 3897 4092 . + 0 ID=cds-WP_032235587.1;Parent=gene-AB69_RS22950;Dbxref=GenBank:WP_032235587.1;Name=WP_032235587.1;Ontology_term=GO:0006629;end_range=4092,.;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AB69_RS22950;partial=true;product=patatin-like phospholipase family protein;protein_id=WP_032235587.1;transl_table=11 ##sequence-region NZ_JHDO01000003.1 1 628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000003.1 RefSeq region 1 628 . + . ID=NZ_JHDO01000003.1:1..628;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000003.1 RefSeq gene 54 628 . - . ID=gene-AB69_RS22945;Name=pstA;end_range=628,.;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AB69_RS22945;old_locus_tag=AB69_4854;partial=true NZ_JHDO01000003.1 Protein Homology CDS 54 628 . - 2 ID=cds-WP_032235592.1;Parent=gene-AB69_RS22945;Dbxref=GenBank:WP_032235592.1;Name=WP_032235592.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;end_range=628,.;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AB69_RS22945;partial=true;product=phosphate ABC transporter permease PstA;protein_id=WP_032235592.1;transl_table=11 ##sequence-region NZ_JHDO01000004.1 1 2200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000004.1 RefSeq region 1 2200 . + . ID=NZ_JHDO01000004.1:1..2200;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000004.1 RefSeq gene 1 747 . + . ID=gene-AB69_RS22940;Name=AB69_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22940;old_locus_tag=AB69_4855;partial=true;start_range=.,1 NZ_JHDO01000004.1 Protein Homology CDS 1 747 . + 0 ID=cds-WP_032235594.1;Parent=gene-AB69_RS22940;Dbxref=GenBank:WP_032235594.1;Name=WP_032235594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AB69_RS22940;partial=true;product=glycyl radical enzyme domain-containing protein;protein_id=WP_032235594.1;start_range=.,1;transl_table=11 NZ_JHDO01000004.1 RefSeq gene 719 1582 . + . ID=gene-AB69_RS22935;Name=AB69_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22935;old_locus_tag=AB69_4856 NZ_JHDO01000004.1 Protein Homology CDS 719 1582 . + 0 ID=cds-WP_001088415.1;Parent=gene-AB69_RS22935;Dbxref=GenBank:WP_001088415.1;Name=WP_001088415.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB69_RS22935;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088415.1;transl_table=11 ##sequence-region NZ_JHDO01000005.1 1 2050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000005.1 RefSeq region 1 2050 . + . ID=NZ_JHDO01000005.1:1..2050;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000005.1 RefSeq gene 1 1133 . - . ID=gene-AB69_RS22930;Name=AB69_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22930;old_locus_tag=AB69_4857;partial=true;start_range=.,1 NZ_JHDO01000005.1 Protein Homology CDS 1 1133 . - 0 ID=cds-WP_001254931.1;Parent=gene-AB69_RS22930;Dbxref=GenBank:WP_001254931.1;Name=WP_001254931.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AB69_RS22930;partial=true;product=IS30-like element IS30 family transposase;protein_id=WP_001254931.1;start_range=.,1;transl_table=11 NZ_JHDO01000005.1 RefSeq pseudogene 1130 1210 . - . ID=gene-AB69_RS30760;Name=AB69_RS30760;end_range=1210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30760;partial=true;pseudo=true NZ_JHDO01000005.1 Protein Homology CDS 1130 1210 . - 0 ID=cds-AB69_RS30760;Parent=gene-AB69_RS30760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305381.1;locus_tag=AB69_RS30760;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000005.1 RefSeq pseudogene 1195 2050 . + . ID=gene-AB69_RS22925;Name=AB69_RS22925;end_range=2050,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22925;old_locus_tag=AB69_4858;partial=true;pseudo=true;start_range=.,1195 NZ_JHDO01000005.1 Protein Homology CDS 1195 2050 . + 0 ID=cds-AB69_RS22925;Parent=gene-AB69_RS22925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2050,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB69_RS22925;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,1195;transl_table=11 ##sequence-region NZ_JHDO01000006.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000006.1 RefSeq region 1 705 . + . ID=NZ_JHDO01000006.1:1..705;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000006.1 RefSeq pseudogene 1 100 . - . ID=gene-AB69_RS29060;Name=AB69_RS29060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29060;old_locus_tag=AB69_4859;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000006.1 Protein Homology CDS 1 100 . - 0 ID=cds-AB69_RS29060;Parent=gene-AB69_RS29060;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB69_RS29060;partial=true;product=fertility inhibition protein FinO;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000006.1 RefSeq pseudogene 155 391 . - . ID=gene-AB69_RS22920;Name=AB69_RS22920;end_range=391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22920;old_locus_tag=AB69_4860;partial=true;pseudo=true NZ_JHDO01000006.1 Protein Homology CDS 155 391 . - 0 ID=cds-AB69_RS22920;Parent=gene-AB69_RS22920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AB69_RS22920;partial=true;product=TraX family protein;pseudo=true;transl_table=11 NZ_JHDO01000006.1 RefSeq pseudogene 385 518 . - . ID=gene-AB69_RS30765;Name=AB69_RS30765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30765;partial=true;pseudo=true;start_range=.,385 NZ_JHDO01000006.1 Protein Homology CDS 385 518 . - 0 ID=cds-AB69_RS30765;Parent=gene-AB69_RS30765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842804.1;locus_tag=AB69_RS30765;partial=true;product=single-stranded DNA-binding protein;pseudo=true;start_range=.,385;transl_table=11 NZ_JHDO01000006.1 RefSeq pseudogene 589 705 . + . ID=gene-AB69_RS30100;Name=AB69_RS30100;end_range=705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30100;partial=true;pseudo=true NZ_JHDO01000006.1 Protein Homology CDS 589 705 . + 0 ID=cds-AB69_RS30100;Parent=gene-AB69_RS30100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB69_RS30100;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000007.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000007.1 RefSeq region 1 410 . + . ID=NZ_JHDO01000007.1:1..410;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000007.1 RefSeq gene 1 410 . + . ID=gene-AB69_RS28220;Name=AB69_RS28220;end_range=410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28220;old_locus_tag=AB69_4861;partial=true;start_range=.,1 NZ_JHDO01000007.1 Protein Homology CDS 1 410 . + 0 ID=cds-WP_032235600.1;Parent=gene-AB69_RS28220;Dbxref=GenBank:WP_032235600.1;Name=WP_032235600.1;Ontology_term=GO:0004803;end_range=410,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AB69_RS28220;partial=true;product=ISAs1 family transposase;protein_id=WP_032235600.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDO01000008.1 1 2588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000008.1 RefSeq region 1 2588 . + . ID=NZ_JHDO01000008.1:1..2588;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000008.1 RefSeq gene 1 204 . + . ID=gene-AB69_RS22910;Name=AB69_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22910;old_locus_tag=AB69_4862;partial=true;start_range=.,1 NZ_JHDO01000008.1 GeneMarkS-2+ CDS 1 204 . + 0 ID=cds-WP_050428479.1;Parent=gene-AB69_RS22910;Dbxref=GenBank:WP_050428479.1;Name=WP_050428479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS22910;partial=true;product=hypothetical protein;protein_id=WP_050428479.1;start_range=.,1;transl_table=11 NZ_JHDO01000008.1 RefSeq gene 191 421 . + . ID=gene-AB69_RS25890;Name=AB69_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS25890 NZ_JHDO01000008.1 Protein Homology CDS 191 421 . + 0 ID=cds-WP_001380705.1;Parent=gene-AB69_RS25890;Dbxref=GenBank:WP_001380705.1;Name=WP_001380705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001380705.1;locus_tag=AB69_RS25890;product=hypothetical protein;protein_id=WP_001380705.1;transl_table=11 NZ_JHDO01000008.1 RefSeq gene 325 573 . - . ID=gene-AB69_RS30665;Name=AB69_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30665 NZ_JHDO01000008.1 Protein Homology CDS 325 573 . - 0 ID=cds-WP_077698067.1;Parent=gene-AB69_RS30665;Dbxref=GenBank:WP_077698067.1;Name=WP_077698067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403191.1;locus_tag=AB69_RS30665;product=hypothetical protein;protein_id=WP_077698067.1;transl_table=11 NZ_JHDO01000008.1 RefSeq gene 1086 1316 . + . ID=gene-AB69_RS0123125;Name=AB69_RS0123125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123125 NZ_JHDO01000008.1 Protein Homology CDS 1086 1316 . + 0 ID=cds-WP_000218642.1;Parent=gene-AB69_RS0123125;Dbxref=GenBank:WP_000218642.1;Name=WP_000218642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AB69_RS0123125;product=hypothetical protein;protein_id=WP_000218642.1;transl_table=11 NZ_JHDO01000008.1 RefSeq gene 1368 2588 . + . ID=gene-AB69_RS22905;Name=AB69_RS22905;end_range=2588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22905;old_locus_tag=AB69_4864;partial=true NZ_JHDO01000008.1 Protein Homology CDS 1368 2588 . + 0 ID=cds-WP_032235602.1;Parent=gene-AB69_RS22905;Dbxref=GenBank:WP_032235602.1;Name=WP_032235602.1;end_range=2588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AB69_RS22905;partial=true;product=DUF3560 domain-containing protein;protein_id=WP_032235602.1;transl_table=11 ##sequence-region NZ_JHDO01000009.1 1 8639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000009.1 RefSeq region 1 8639 . + . ID=NZ_JHDO01000009.1:1..8639;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000009.1 RefSeq gene 138 1040 . - . ID=gene-AB69_RS22900;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB69_RS22900;old_locus_tag=AB69_4865 NZ_JHDO01000009.1 Protein Homology CDS 138 1040 . - 0 ID=cds-WP_000832247.1;Parent=gene-AB69_RS22900;Dbxref=GenBank:WP_000832247.1;Name=WP_000832247.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418740.1;locus_tag=AB69_RS22900;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832247.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 1060 1503 . - . ID=gene-AB69_RS22895;Name=AB69_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22895;old_locus_tag=AB69_4866 NZ_JHDO01000009.1 Protein Homology CDS 1060 1503 . - 0 ID=cds-WP_077897989.1;Parent=gene-AB69_RS22895;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AB69_RS22895;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 1576 2106 . - . ID=gene-AB69_RS22890;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AB69_RS22890;old_locus_tag=AB69_4867 NZ_JHDO01000009.1 Protein Homology CDS 1576 2106 . - 0 ID=cds-WP_001244827.1;Parent=gene-AB69_RS22890;Dbxref=GenBank:WP_001244827.1;Name=WP_001244827.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418738.1;locus_tag=AB69_RS22890;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244827.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 2116 4752 . - . ID=gene-AB69_RS22885;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AB69_RS22885;old_locus_tag=AB69_4868 NZ_JHDO01000009.1 Protein Homology CDS 2116 4752 . - 0 ID=cds-WP_000121002.1;Parent=gene-AB69_RS22885;Dbxref=GenBank:WP_000121002.1;Name=WP_000121002.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418737.1;locus_tag=AB69_RS22885;product=fimbrial usher FimD;protein_id=WP_000121002.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 4819 5544 . - . ID=gene-AB69_RS22880;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB69_RS22880;old_locus_tag=AB69_4869 NZ_JHDO01000009.1 Protein Homology CDS 4819 5544 . - 0 ID=cds-WP_000066560.1;Parent=gene-AB69_RS22880;Dbxref=GenBank:WP_000066560.1;Name=WP_000066560.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AB69_RS22880;product=type 1 fimbria chaperone FimC;protein_id=WP_000066560.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 5581 6120 . - . ID=gene-AB69_RS22875;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AB69_RS22875;old_locus_tag=AB69_4870 NZ_JHDO01000009.1 Protein Homology CDS 5581 6120 . - 0 ID=cds-WP_000824114.1;Parent=gene-AB69_RS22875;Dbxref=GenBank:WP_000824114.1;Name=WP_000824114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AB69_RS22875;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 6185 6733 . - . ID=gene-AB69_RS22870;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB69_RS22870;old_locus_tag=AB69_4871 NZ_JHDO01000009.1 Protein Homology CDS 6185 6733 . - 0 ID=cds-WP_000695564.1;Parent=gene-AB69_RS22870;Dbxref=GenBank:WP_000695564.1;Name=WP_000695564.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418734.1;locus_tag=AB69_RS22870;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695564.1;transl_table=11 NZ_JHDO01000009.1 RefSeq gene 7216 7812 . - . ID=gene-AB69_RS22865;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB69_RS22865;old_locus_tag=AB69_4872 NZ_JHDO01000009.1 Protein Homology CDS 7216 7812 . - 0 ID=cds-WP_000044711.1;Parent=gene-AB69_RS22865;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB69_RS22865;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JHDO01000009.1 RefSeq pseudogene 8290 8639 . - . ID=gene-AB69_RS25915;Name=fimB;end_range=8639,.;gbkey=Gene;gene=fimB;gene_biotype=pseudogene;locus_tag=AB69_RS25915;old_locus_tag=AB69_4873;partial=true;pseudo=true NZ_JHDO01000009.1 Protein Homology CDS 8290 8639 . - 2 ID=cds-AB69_RS25915;Parent=gene-AB69_RS25915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8639,.;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB69_RS25915;partial=true;product=type 1 fimbria switch DNA invertase FimB;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000010.1 1 48017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000010.1 RefSeq region 1 48017 . + . ID=NZ_JHDO01000010.1:1..48017;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000010.1 RefSeq pseudogene 19 209 . + . ID=gene-AB69_RS30770;Name=AB69_RS30770;end_range=209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30770;partial=true;pseudo=true NZ_JHDO01000010.1 Protein Homology CDS 19 209 . + 0 ID=cds-AB69_RS30770;Parent=gene-AB69_RS30770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842804.1;locus_tag=AB69_RS30770;partial=true;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 348 1382 . - . ID=gene-AB69_RS22860;Name=AB69_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22860;old_locus_tag=AB69_4874 NZ_JHDO01000010.1 Protein Homology CDS 348 1382 . - 0 ID=cds-WP_422653645.1;Parent=gene-AB69_RS22860;Dbxref=GenBank:WP_422653645.1;Name=WP_422653645.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=AB69_RS22860;product=IS110 family transposase;protein_id=WP_422653645.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 1626 1922 . + . ID=gene-AB69_RS22855;Name=AB69_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22855;old_locus_tag=AB69_4875 NZ_JHDO01000010.1 Protein Homology CDS 1626 1922 . + 0 ID=cds-WP_001272251.1;Parent=gene-AB69_RS22855;Dbxref=GenBank:WP_001272251.1;Name=WP_001272251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545326.1;locus_tag=AB69_RS22855;product=hypothetical protein;protein_id=WP_001272251.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 2032 2853 . + . ID=gene-AB69_RS22850;Name=AB69_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22850;old_locus_tag=AB69_4876 NZ_JHDO01000010.1 Protein Homology CDS 2032 2853 . + 0 ID=cds-WP_001234437.1;Parent=gene-AB69_RS22850;Dbxref=GenBank:WP_001234437.1;Name=WP_001234437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AB69_RS22850;product=DUF932 domain-containing protein;protein_id=WP_001234437.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 3149 3751 . - . ID=gene-AB69_RS22845;Name=AB69_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22845;old_locus_tag=AB69_4877 NZ_JHDO01000010.1 Protein Homology CDS 3149 3751 . - 0 ID=cds-WP_072205450.1;Parent=gene-AB69_RS22845;Dbxref=GenBank:WP_072205450.1;Name=WP_072205450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AB69_RS22845;product=transglycosylase SLT domain-containing protein;protein_id=WP_072205450.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 4074 4457 . + . ID=gene-AB69_RS22840;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AB69_RS22840;old_locus_tag=AB69_4878 NZ_JHDO01000010.1 Protein Homology CDS 4074 4457 . + 0 ID=cds-WP_000124827.1;Parent=gene-AB69_RS22840;Dbxref=GenBank:WP_000124827.1;Name=WP_000124827.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AB69_RS22840;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_000124827.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 4651 5322 . + . ID=gene-AB69_RS22835;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AB69_RS22835;old_locus_tag=AB69_4879 NZ_JHDO01000010.1 Protein Homology CDS 4651 5322 . + 0 ID=cds-WP_000283565.1;Parent=gene-AB69_RS22835;Dbxref=GenBank:WP_000283565.1;Name=WP_000283565.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687056.1;locus_tag=AB69_RS22835;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_000283565.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 5459 5686 . + . ID=gene-AB69_RS0123135;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AB69_RS0123135 NZ_JHDO01000010.1 Protein Homology CDS 5459 5686 . + 0 ID=cds-WP_000089263.1;Parent=gene-AB69_RS0123135;Dbxref=GenBank:WP_000089263.1;Name=WP_000089263.1;gbkey=CDS;gene=traY;inference=COORDINATES: protein motif:HMM:NF010300.0;locus_tag=AB69_RS0123135;product=conjugal transfer relaxosome protein TraY;protein_id=WP_000089263.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 5719 6084 . + . ID=gene-AB69_RS22830;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AB69_RS22830;old_locus_tag=AB69_4880 NZ_JHDO01000010.1 Protein Homology CDS 5719 6084 . + 0 ID=cds-WP_001098999.1;Parent=gene-AB69_RS22830;Dbxref=GenBank:WP_001098999.1;Name=WP_001098999.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401864.1;locus_tag=AB69_RS22830;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001098999.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 6099 6410 . + . ID=gene-AB69_RS22825;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AB69_RS22825;old_locus_tag=AB69_4881 NZ_JHDO01000010.1 Protein Homology CDS 6099 6410 . + 0 ID=cds-WP_000012116.1;Parent=gene-AB69_RS22825;Dbxref=GenBank:WP_000012116.1;Name=WP_000012116.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AB69_RS22825;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012116.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 6432 6998 . + . ID=gene-AB69_RS22820;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB69_RS22820;old_locus_tag=AB69_4882 NZ_JHDO01000010.1 Protein Homology CDS 6432 6998 . + 0 ID=cds-WP_000399801.1;Parent=gene-AB69_RS22820;Dbxref=GenBank:WP_000399801.1;Name=WP_000399801.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AB69_RS22820;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399801.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 6985 7713 . + . ID=gene-AB69_RS22815;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AB69_RS22815;old_locus_tag=AB69_4883 NZ_JHDO01000010.1 Protein Homology CDS 6985 7713 . + 0 ID=cds-WP_001230778.1;Parent=gene-AB69_RS22815;Dbxref=GenBank:WP_001230778.1;Name=WP_001230778.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230803.1;locus_tag=AB69_RS22815;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230778.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 7713 9311 . + . ID=gene-AB69_RS22810;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AB69_RS22810;old_locus_tag=AB69_4884 NZ_JHDO01000010.1 Protein Homology CDS 7713 9311 . + 0 ID=cds-WP_074573980.1;Parent=gene-AB69_RS22810;Dbxref=GenBank:WP_074573980.1;Name=WP_074573980.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589092.1;locus_tag=AB69_RS22810;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_074573980.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 9202 9720 . + . ID=gene-AB69_RS0123140;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AB69_RS0123140 NZ_JHDO01000010.1 Protein Homology CDS 9202 9720 . + 0 ID=cds-WP_149007344.1;Parent=gene-AB69_RS0123140;Dbxref=GenBank:WP_149007344.1;Name=WP_149007344.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001345836.1;locus_tag=AB69_RS0123140;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_149007344.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 9707 10027 . + . ID=gene-AB69_RS22805;Name=AB69_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22805;old_locus_tag=AB69_4887 NZ_JHDO01000010.1 Protein Homology CDS 9707 10027 . + 0 ID=cds-WP_001057295.1;Parent=gene-AB69_RS22805;Dbxref=GenBank:WP_001057295.1;Name=WP_001057295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=AB69_RS22805;product=conjugal transfer protein TrbD;protein_id=WP_001057295.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 10020 10271 . + . ID=gene-AB69_RS22800;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AB69_RS22800;old_locus_tag=AB69_4888 NZ_JHDO01000010.1 Protein Homology CDS 10020 10271 . + 0 ID=cds-WP_001362535.1;Parent=gene-AB69_RS22800;Dbxref=GenBank:WP_001362535.1;Name=WP_001362535.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AB69_RS22800;product=conjugal transfer protein TrbG;protein_id=WP_001362535.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 10268 10783 . + . ID=gene-AB69_RS22795;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AB69_RS22795;old_locus_tag=AB69_4889 NZ_JHDO01000010.1 Protein Homology CDS 10268 10783 . + 0 ID=cds-WP_000809837.1;Parent=gene-AB69_RS22795;Dbxref=GenBank:WP_000809837.1;Name=WP_000809837.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AB69_RS22795;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809837.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 10918 11139 . + . ID=gene-AB69_RS25930;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AB69_RS25930;old_locus_tag=AB69_4890 NZ_JHDO01000010.1 Protein Homology CDS 10918 11139 . + 0 ID=cds-WP_001278694.1;Parent=gene-AB69_RS25930;Dbxref=GenBank:WP_001278694.1;Name=WP_001278694.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AB69_RS25930;product=conjugal transfer protein TraR;protein_id=WP_001278694.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 11299 13926 . + . ID=gene-AB69_RS22785;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AB69_RS22785;old_locus_tag=AB69_4891 NZ_JHDO01000010.1 Protein Homology CDS 11299 13926 . + 0 ID=cds-WP_032231687.1;Parent=gene-AB69_RS22785;Dbxref=GenBank:WP_032231687.1;Name=WP_032231687.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AB69_RS22785;product=type IV secretion system protein TraC;protein_id=WP_032231687.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 13923 14309 . + . ID=gene-AB69_RS22780;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AB69_RS22780;old_locus_tag=AB69_4892 NZ_JHDO01000010.1 Protein Homology CDS 13923 14309 . + 0 ID=cds-WP_000214080.1;Parent=gene-AB69_RS22780;Dbxref=GenBank:WP_000214080.1;Name=WP_000214080.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AB69_RS22780;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000214080.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 14306 14938 . + . ID=gene-AB69_RS22775;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AB69_RS22775;old_locus_tag=AB69_4893 NZ_JHDO01000010.1 Protein Homology CDS 14306 14938 . + 0 ID=cds-WP_001377749.1;Parent=gene-AB69_RS22775;Dbxref=GenBank:WP_001377749.1;Name=WP_001377749.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AB69_RS22775;product=type-F conjugative transfer system protein TraW;protein_id=WP_001377749.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 14935 15927 . + . ID=gene-AB69_RS22770;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AB69_RS22770;old_locus_tag=AB69_4894 NZ_JHDO01000010.1 Protein Homology CDS 14935 15927 . + 0 ID=cds-WP_000830836.1;Parent=gene-AB69_RS22770;Dbxref=GenBank:WP_000830836.1;Name=WP_000830836.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AB69_RS22770;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830836.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 15953 16261 . + . ID=gene-AB69_RS22765;Name=AB69_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22765;old_locus_tag=AB69_4895 NZ_JHDO01000010.1 Protein Homology CDS 15953 16261 . + 0 ID=cds-WP_032231685.1;Parent=gene-AB69_RS22765;Dbxref=GenBank:WP_032231685.1;Name=WP_032231685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297510.1;locus_tag=AB69_RS22765;product=hypothetical protein;protein_id=WP_032231685.1;transl_table=11 NZ_JHDO01000010.1 RefSeq pseudogene 16431 16748 . + . ID=gene-AB69_RS22760;Name=AB69_RS22760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22760;old_locus_tag=AB69_4897;partial=true;pseudo=true;start_range=.,16431 NZ_JHDO01000010.1 Protein Homology CDS 16431 16748 . + 0 ID=cds-AB69_RS22760;Parent=gene-AB69_RS22760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AB69_RS22760;partial=true;product=TraU family protein;pseudo=true;start_range=.,16431;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 16774 17235 . + . ID=gene-AB69_RS22755;Name=AB69_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22755;old_locus_tag=AB69_4898 NZ_JHDO01000010.1 Protein Homology CDS 16774 17235 . + 0 ID=cds-WP_000277848.1;Parent=gene-AB69_RS22755;Dbxref=GenBank:WP_000277848.1;Name=WP_000277848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277843.1;locus_tag=AB69_RS22755;product=hypothetical protein;protein_id=WP_000277848.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 17265 17717 . + . ID=gene-AB69_RS22750;Name=AB69_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22750;old_locus_tag=AB69_4899 NZ_JHDO01000010.1 Protein Homology CDS 17265 17717 . + 0 ID=cds-WP_000069431.1;Parent=gene-AB69_RS22750;Dbxref=GenBank:WP_000069431.1;Name=WP_000069431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233159.1;locus_tag=AB69_RS22750;product=hypothetical protein;protein_id=WP_000069431.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 17745 18383 . + . ID=gene-AB69_RS22745;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AB69_RS22745;old_locus_tag=AB69_4900 NZ_JHDO01000010.1 Protein Homology CDS 17745 18383 . + 0 ID=cds-WP_001104082.1;Parent=gene-AB69_RS22745;Dbxref=GenBank:WP_001104082.1;Name=WP_001104082.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733892.1;locus_tag=AB69_RS22745;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001104082.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 18380 18751 . + . ID=gene-AB69_RS0123145;Name=AB69_RS0123145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123145 NZ_JHDO01000010.1 Protein Homology CDS 18380 18751 . + 0 ID=cds-WP_032231684.1;Parent=gene-AB69_RS0123145;Dbxref=GenBank:WP_032231684.1;Name=WP_032231684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056340.1;locus_tag=AB69_RS0123145;product=hypothetical protein;protein_id=WP_032231684.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 18776 19198 . + . ID=gene-AB69_RS22740;Name=AB69_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22740;old_locus_tag=AB69_4901 NZ_JHDO01000010.1 Protein Homology CDS 18776 19198 . + 0 ID=cds-WP_001229313.1;Parent=gene-AB69_RS22740;Dbxref=GenBank:WP_001229313.1;Name=WP_001229313.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003982281.1;locus_tag=AB69_RS22740;product=HNH endonuclease;protein_id=WP_001229313.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 19195 21003 . + . ID=gene-AB69_RS22735;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AB69_RS22735;old_locus_tag=AB69_4902 NZ_JHDO01000010.1 Protein Homology CDS 19195 21003 . + 0 ID=cds-WP_001297501.1;Parent=gene-AB69_RS22735;Dbxref=GenBank:WP_001297501.1;Name=WP_001297501.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AB69_RS22735;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_001297501.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 21030 21290 . + . ID=gene-AB69_RS22730;Name=AB69_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22730;old_locus_tag=AB69_4903 NZ_JHDO01000010.1 Protein Homology CDS 21030 21290 . + 0 ID=cds-WP_001399778.1;Parent=gene-AB69_RS22730;Dbxref=GenBank:WP_001399778.1;Name=WP_001399778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AB69_RS22730;product=conjugal transfer protein TrbE;protein_id=WP_001399778.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 21283 22026 . + . ID=gene-AB69_RS22725;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AB69_RS22725;old_locus_tag=AB69_4904 NZ_JHDO01000010.1 Protein Homology CDS 21283 22026 . + 0 ID=cds-WP_001030371.1;Parent=gene-AB69_RS22725;Dbxref=GenBank:WP_001030371.1;Name=WP_001030371.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AB69_RS22725;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001030371.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 22040 22381 . + . ID=gene-AB69_RS0123150;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AB69_RS0123150 NZ_JHDO01000010.1 Protein Homology CDS 22040 22381 . + 0 ID=cds-WP_001423199.1;Parent=gene-AB69_RS0123150;Dbxref=GenBank:WP_001423199.1;Name=WP_001423199.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530454.1;locus_tag=AB69_RS0123150;product=conjugal transfer protein TrbA;protein_id=WP_001423199.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 22778 23062 . + . ID=gene-AB69_RS22720;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AB69_RS22720;old_locus_tag=AB69_4907 NZ_JHDO01000010.1 Protein Homology CDS 22778 23062 . + 0 ID=cds-WP_000624108.1;Parent=gene-AB69_RS22720;Dbxref=GenBank:WP_000624108.1;Name=WP_000624108.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AB69_RS22720;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_000624108.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 23049 23594 . + . ID=gene-AB69_RS22715;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AB69_RS22715;old_locus_tag=AB69_4908 NZ_JHDO01000010.1 Protein Homology CDS 23049 23594 . + 0 ID=cds-WP_032231681.1;Parent=gene-AB69_RS22715;Dbxref=GenBank:WP_032231681.1;Name=WP_032231681.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AB69_RS22715;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_032231681.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 23584 23898 . + . ID=gene-AB69_RS25935;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AB69_RS25935;old_locus_tag=AB69_4909 NZ_JHDO01000010.1 Protein Homology CDS 23584 23898 . + 0 ID=cds-WP_001353640.1;Parent=gene-AB69_RS25935;Dbxref=GenBank:WP_001353640.1;Name=WP_001353640.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233153.1;locus_tag=AB69_RS25935;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001353640.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 23852 24244 . + . ID=gene-AB69_RS22710;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=protein_coding;locus_tag=AB69_RS22710;old_locus_tag=AB69_4910 NZ_JHDO01000010.1 Protein Homology CDS 23852 24244 . + 0 ID=cds-WP_000138372.1;Parent=gene-AB69_RS22710;Dbxref=GenBank:WP_000138372.1;Name=WP_000138372.1;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138370.1;locus_tag=AB69_RS22710;product=F-type conjugal transfer protein TrbF;protein_id=WP_000138372.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 24231 25604 . + . ID=gene-AB69_RS22705;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AB69_RS22705;old_locus_tag=AB69_4911 NZ_JHDO01000010.1 Protein Homology CDS 24231 25604 . + 0 ID=cds-WP_032231679.1;Parent=gene-AB69_RS22705;Dbxref=GenBank:WP_032231679.1;Name=WP_032231679.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137361.1;locus_tag=AB69_RS22705;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_032231679.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 25601 28420 . + . ID=gene-AB69_RS22700;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AB69_RS22700;old_locus_tag=AB69_4912 NZ_JHDO01000010.1 Protein Homology CDS 25601 28420 . + 0 ID=cds-WP_032231677.1;Parent=gene-AB69_RS22700;Dbxref=GenBank:WP_032231677.1;Name=WP_032231677.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007068.1;locus_tag=AB69_RS22700;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_032231677.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 28439 28936 . + . ID=gene-AB69_RS0123160;Name=AB69_RS0123160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123160 NZ_JHDO01000010.1 Protein Homology CDS 28439 28936 . + 0 ID=cds-WP_000605862.1;Parent=gene-AB69_RS0123160;Dbxref=GenBank:WP_000605862.1;Name=WP_000605862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605858.1;locus_tag=AB69_RS0123160;product=entry exclusion protein;protein_id=WP_000605862.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 28968 29699 . + . ID=gene-AB69_RS22695;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AB69_RS22695;old_locus_tag=AB69_4913 NZ_JHDO01000010.1 Protein Homology CDS 28968 29699 . + 0 ID=cds-WP_000850422.1;Parent=gene-AB69_RS22695;Dbxref=GenBank:WP_000850422.1;Name=WP_000850422.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AB69_RS22695;product=conjugal transfer complement resistance protein TraT;protein_id=WP_000850422.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 29902 30639 . + . ID=gene-AB69_RS22690;Name=AB69_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22690;old_locus_tag=AB69_4914 NZ_JHDO01000010.1 Protein Homology CDS 29902 30639 . + 0 ID=cds-WP_032231676.1;Parent=gene-AB69_RS22690;Dbxref=GenBank:WP_032231676.1;Name=WP_032231676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831975.1;locus_tag=AB69_RS22690;product=hypothetical protein;protein_id=WP_032231676.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 30690 32870 . + . ID=gene-AB69_RS22685;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AB69_RS22685;old_locus_tag=AB69_4915 NZ_JHDO01000010.1 Protein Homology CDS 30690 32870 . + 0 ID=cds-WP_032235605.1;Parent=gene-AB69_RS22685;Dbxref=GenBank:WP_032235605.1;Name=WP_032235605.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577029.1;locus_tag=AB69_RS22685;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032235605.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 32870 38140 . + . ID=gene-AB69_RS22680;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AB69_RS22680;old_locus_tag=AB69_4916 NZ_JHDO01000010.1 Protein Homology CDS 32870 38140 . + 0 ID=cds-WP_032231673.1;Parent=gene-AB69_RS22680;Dbxref=GenBank:WP_032231673.1;Name=WP_032231673.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402905.1;locus_tag=AB69_RS22680;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032231673.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 38189 38608 . + . ID=gene-AB69_RS0123165;Name=AB69_RS0123165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123165 NZ_JHDO01000010.1 Protein Homology CDS 38189 38608 . + 0 ID=cds-WP_000451342.1;Parent=gene-AB69_RS0123165;Dbxref=GenBank:WP_000451342.1;Name=WP_000451342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001470742.1;locus_tag=AB69_RS0123165;product=hypothetical protein;protein_id=WP_000451342.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 38630 39364 . + . ID=gene-AB69_RS22675;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AB69_RS22675;old_locus_tag=AB69_4917 NZ_JHDO01000010.1 Protein Homology CDS 38630 39364 . + 0 ID=cds-WP_000432273.1;Parent=gene-AB69_RS22675;Dbxref=GenBank:WP_000432273.1;Name=WP_000432273.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686760.1;locus_tag=AB69_RS22675;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000432273.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 39419 39979 . + . ID=gene-AB69_RS22670;Name=AB69_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22670;old_locus_tag=AB69_4918 NZ_JHDO01000010.1 Protein Homology CDS 39419 39979 . + 0 ID=cds-WP_001400867.1;Parent=gene-AB69_RS22670;Dbxref=GenBank:WP_001400867.1;Name=WP_001400867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB69_RS22670;product=fertility inhibition protein FinO;protein_id=WP_001400867.1;transl_table=11 NZ_JHDO01000010.1 RefSeq pseudogene 40111 40260 . + . ID=gene-AB69_RS29080;Name=AB69_RS29080;end_range=40260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29080;old_locus_tag=AB69_4919;partial=true;pseudo=true NZ_JHDO01000010.1 Protein Homology CDS 40111 40260 . + 0 ID=cds-AB69_RS29080;Parent=gene-AB69_RS29080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=40260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958725.1;locus_tag=AB69_RS29080;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 40569 41030 . + . ID=gene-AB69_RS22665;Name=AB69_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22665;old_locus_tag=AB69_4921 NZ_JHDO01000010.1 Protein Homology CDS 40569 41030 . + 0 ID=cds-WP_001233844.1;Parent=gene-AB69_RS22665;Dbxref=GenBank:WP_001233844.1;Name=WP_001233844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AB69_RS22665;product=thermonuclease family protein;protein_id=WP_001233844.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 41076 41285 . + . ID=gene-AB69_RS22660;Name=AB69_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22660;old_locus_tag=AB69_4922 NZ_JHDO01000010.1 Protein Homology CDS 41076 41285 . + 0 ID=cds-WP_001353639.1;Parent=gene-AB69_RS22660;Dbxref=GenBank:WP_001353639.1;Name=WP_001353639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AB69_RS22660;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_001353639.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 41323 41913 . + . ID=gene-AB69_RS22655;Name=AB69_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22655;old_locus_tag=AB69_4923 NZ_JHDO01000010.1 Protein Homology CDS 41323 41913 . + 0 ID=cds-WP_000766807.1;Parent=gene-AB69_RS22655;Dbxref=GenBank:WP_000766807.1;Name=WP_000766807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AB69_RS22655;product=DUF2726 domain-containing protein;protein_id=WP_000766807.1;transl_table=11 NZ_JHDO01000010.1 RefSeq pseudogene 42153 42368 . + . ID=gene-AB69_RS29085;Name=repA;gbkey=Gene;gene=repA;gene_biotype=pseudogene;locus_tag=AB69_RS29085;pseudo=true NZ_JHDO01000010.1 Protein Homology CDS 42153 42368 . + 0 ID=cds-AB69_RS29085;Parent=gene-AB69_RS29085;Note=frameshifted;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083844.1;locus_tag=AB69_RS29085;product=replication regulatory protein RepA;pseudo=true;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 42641 42715 . + . ID=gene-AB69_RS0123180;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB69_RS0123180 NZ_JHDO01000010.1 Protein Homology CDS 42641 42715 . + 0 ID=cds-WP_001365705.1;Parent=gene-AB69_RS0123180;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AB69_RS0123180;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 42708 43565 . + . ID=gene-AB69_RS22650;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB69_RS22650;old_locus_tag=AB69_4925 NZ_JHDO01000010.1 Protein Homology CDS 42708 43565 . + 0 ID=cds-WP_000130987.1;Parent=gene-AB69_RS22650;Dbxref=GenBank:WP_000130987.1;Name=WP_000130987.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB69_RS22650;product=incFII family plasmid replication initiator RepA;protein_id=WP_000130987.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 44504 45157 . + . ID=gene-AB69_RS22645;Name=AB69_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22645;old_locus_tag=AB69_4928 NZ_JHDO01000010.1 Protein Homology CDS 44504 45157 . + 0 ID=cds-WP_000616807.1;Parent=gene-AB69_RS22645;Dbxref=GenBank:WP_000616807.1;Name=WP_000616807.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757010.1;locus_tag=AB69_RS22645;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_000616807.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 45250 45507 . + . ID=gene-AB69_RS29610;Name=pemI;gbkey=Gene;gene=pemI;gene_biotype=protein_coding;locus_tag=AB69_RS29610;old_locus_tag=AB69_4929 NZ_JHDO01000010.1 Protein Homology CDS 45250 45507 . + 0 ID=cds-WP_000557619.1;Parent=gene-AB69_RS29610;Dbxref=GenBank:WP_000557619.1;Name=WP_000557619.1;gbkey=CDS;gene=pemI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557619.1;locus_tag=AB69_RS29610;product=type II toxin-antitoxin system antitoxin PemI;protein_id=WP_000557619.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 45509 45841 . + . ID=gene-AB69_RS22635;Name=pemK-mt;gbkey=Gene;gene=pemK-mt;gene_biotype=protein_coding;locus_tag=AB69_RS22635;old_locus_tag=AB69_4930 NZ_JHDO01000010.1 Protein Homology CDS 45509 45841 . + 0 ID=cds-WP_000439434.1;Parent=gene-AB69_RS22635;Dbxref=GenBank:WP_000439434.1;Name=WP_000439434.1;gbkey=CDS;gene=pemK-mt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206891.1;locus_tag=AB69_RS22635;product=type II toxin-antitoxin system toxin endoribonuclease PemK-mt;protein_id=WP_000439434.1;transl_table=11 NZ_JHDO01000010.1 RefSeq gene 46126 47436 . + . ID=gene-AB69_RS22630;Name=AB69_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22630;old_locus_tag=AB69_4931 NZ_JHDO01000010.1 Protein Homology CDS 46126 47436 . + 0 ID=cds-WP_001262765.1;Parent=gene-AB69_RS22630;Dbxref=GenBank:WP_001262765.1;Name=WP_001262765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262762.1;locus_tag=AB69_RS22630;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_001262765.1;transl_table=11 NZ_JHDO01000010.1 RefSeq pseudogene 47465 48017 . + . ID=gene-AB69_RS28230;Name=AB69_RS28230;end_range=48017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28230;partial=true;pseudo=true NZ_JHDO01000010.1 Protein Homology CDS 47465 48017 . + 0 ID=cds-AB69_RS28230;Parent=gene-AB69_RS28230;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=48017,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28230;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000011.1 1 2582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000011.1 RefSeq region 1 2582 . + . ID=NZ_JHDO01000011.1:1..2582;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000011.1 RefSeq gene 255 1259 . - . ID=gene-AB69_RS22620;Name=AB69_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22620;old_locus_tag=AB69_4933 NZ_JHDO01000011.1 Protein Homology CDS 255 1259 . - 0 ID=cds-WP_001403858.1;Parent=gene-AB69_RS22620;Dbxref=GenBank:WP_001403858.1;Name=WP_001403858.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=AB69_RS22620;product=IS110 family transposase;protein_id=WP_001403858.1;transl_table=11 NZ_JHDO01000011.1 RefSeq gene 1626 2303 . + . ID=gene-AB69_RS22615;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB69_RS22615;old_locus_tag=AB69_4934 NZ_JHDO01000011.1 Protein Homology CDS 1626 2303 . + 0 ID=cds-WP_001339397.1;Parent=gene-AB69_RS22615;Dbxref=GenBank:WP_001339397.1;Name=WP_001339397.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AB69_RS22615;product=IS66-like element accessory protein TnpA;protein_id=WP_001339397.1;transl_table=11 NZ_JHDO01000011.1 RefSeq gene 2303 2582 . + . ID=gene-AB69_RS22610;Name=tnpB;end_range=2582,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB69_RS22610;old_locus_tag=AB69_4935;partial=true NZ_JHDO01000011.1 Protein Homology CDS 2303 2582 . + 0 ID=cds-WP_000624615.1;Parent=gene-AB69_RS22610;Dbxref=GenBank:WP_000624615.1;Name=WP_000624615.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;end_range=2582,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB69_RS22610;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624615.1;transl_table=11 ##sequence-region NZ_JHDO01000012.1 1 2902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000012.1 RefSeq region 1 2902 . + . ID=NZ_JHDO01000012.1:1..2902;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000012.1 RefSeq gene 1 306 . + . ID=gene-AB69_RS22605;Name=AB69_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22605;old_locus_tag=AB69_4936;partial=true;start_range=.,1 NZ_JHDO01000012.1 Protein Homology CDS 1 306 . + 0 ID=cds-WP_032230913.1;Parent=gene-AB69_RS22605;Dbxref=GenBank:WP_032230913.1;Name=WP_032230913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=AB69_RS22605;partial=true;product=IS91 family transposase;protein_id=WP_032230913.1;start_range=.,1;transl_table=11 NZ_JHDO01000012.1 RefSeq gene 527 718 . - . ID=gene-AB69_RS22600;Name=AB69_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22600;old_locus_tag=AB69_4937 NZ_JHDO01000012.1 Protein Homology CDS 527 718 . - 0 ID=cds-WP_000829597.1;Parent=gene-AB69_RS22600;Dbxref=GenBank:WP_000829597.1;Name=WP_000829597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000841011.1;locus_tag=AB69_RS22600;product=hypothetical protein;protein_id=WP_000829597.1;transl_table=11 NZ_JHDO01000012.1 RefSeq pseudogene 900 980 . + . ID=gene-AB69_RS30105;Name=AB69_RS30105;end_range=980,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30105;partial=true;pseudo=true NZ_JHDO01000012.1 Protein Homology CDS 900 980 . + 0 ID=cds-AB69_RS30105;Parent=gene-AB69_RS30105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_145811.1;locus_tag=AB69_RS30105;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000012.1 RefSeq gene 1012 2583 . - . ID=gene-AB69_RS22595;Name=AB69_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22595;old_locus_tag=AB69_4938 NZ_JHDO01000012.1 Protein Homology CDS 1012 2583 . - 0 ID=cds-WP_001743889.1;Parent=gene-AB69_RS22595;Dbxref=GenBank:WP_001743889.1;Name=WP_001743889.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB69_RS22595;product=IS66-like element ISCro1 family transposase;protein_id=WP_001743889.1;transl_table=11 NZ_JHDO01000012.1 RefSeq gene 2603 2902 . - . ID=gene-AB69_RS0123195;Name=tnpB;end_range=2902,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB69_RS0123195;partial=true NZ_JHDO01000012.1 Protein Homology CDS 2603 2902 . - 0 ID=cds-WP_148723907.1;Parent=gene-AB69_RS0123195;Dbxref=GenBank:WP_148723907.1;Name=WP_148723907.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;end_range=2902,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB69_RS0123195;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_148723907.1;transl_table=11 ##sequence-region NZ_JHDO01000013.1 1 7127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000013.1 RefSeq region 1 7127 . + . ID=NZ_JHDO01000013.1:1..7127;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000013.1 RefSeq gene 1 187 . - . ID=gene-AB69_RS22590;Name=AB69_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22590;old_locus_tag=AB69_4940;partial=true;start_range=.,1 NZ_JHDO01000013.1 Protein Homology CDS 1 187 . - 0 ID=cds-WP_032235612.1;Parent=gene-AB69_RS22590;Dbxref=GenBank:WP_032235612.1;Name=WP_032235612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958725.1;locus_tag=AB69_RS22590;partial=true;product=ANR family transcriptional regulator;protein_id=WP_032235612.1;start_range=.,1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 320 880 . - . ID=gene-AB69_RS22585;Name=AB69_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22585;old_locus_tag=AB69_4941 NZ_JHDO01000013.1 Protein Homology CDS 320 880 . - 0 ID=cds-WP_000840466.1;Parent=gene-AB69_RS22585;Dbxref=GenBank:WP_000840466.1;Name=WP_000840466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB69_RS22585;product=fertility inhibition protein FinO;protein_id=WP_000840466.1;transl_table=11 NZ_JHDO01000013.1 RefSeq pseudogene 983 1786 . - . ID=gene-AB69_RS0123200;Name=uilS;end_range=1786,.;gbkey=Gene;gene=uilS;gene_biotype=pseudogene;locus_tag=AB69_RS0123200;partial=true;pseudo=true NZ_JHDO01000013.1 Protein Homology CDS 983 1786 . - 0 ID=cds-AB69_RS0123200;Parent=gene-AB69_RS0123200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1786,.;gbkey=CDS;gene=uilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=AB69_RS0123200;partial=true;product=UilS family quorum-quenching N-acyl-homoserine lactonase;pseudo=true;transl_table=11 NZ_JHDO01000013.1 RefSeq pseudogene 1783 2640 . + . ID=gene-AB69_RS22580;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=AB69_RS22580;old_locus_tag=AB69_4943;partial=true;pseudo=true;start_range=.,1783 NZ_JHDO01000013.1 Protein Homology CDS 1783 2640 . + 0 ID=cds-AB69_RS22580;Parent=gene-AB69_RS22580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766293.1;locus_tag=AB69_RS22580;partial=true;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;start_range=.,1783;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 2645 3037 . - . ID=gene-AB69_RS22575;Name=AB69_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22575;old_locus_tag=AB69_4944 NZ_JHDO01000013.1 Protein Homology CDS 2645 3037 . - 0 ID=cds-WP_000340829.1;Parent=gene-AB69_RS22575;Dbxref=GenBank:WP_000340829.1;Name=WP_000340829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555635.1;locus_tag=AB69_RS22575;product=plasmid partitioning/stability family protein;protein_id=WP_000340829.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 3042 4013 . - . ID=gene-AB69_RS22570;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;locus_tag=AB69_RS22570;old_locus_tag=AB69_4945 NZ_JHDO01000013.1 Protein Homology CDS 3042 4013 . - 0 ID=cds-WP_001103690.1;Parent=gene-AB69_RS22570;Dbxref=GenBank:WP_001103690.1;Name=WP_001103690.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505082.1;locus_tag=AB69_RS22570;product=plasmid segregation protein ParM domain-containing protein;protein_id=WP_001103690.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 4242 4886 . + . ID=gene-AB69_RS22565;Name=AB69_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22565;old_locus_tag=AB69_4946 NZ_JHDO01000013.1 Protein Homology CDS 4242 4886 . + 0 ID=cds-WP_000633913.1;Parent=gene-AB69_RS22565;Dbxref=GenBank:WP_000633913.1;Name=WP_000633913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633910.1;locus_tag=AB69_RS22565;product=division plane positioning ATPase MipZ;protein_id=WP_000633913.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 4880 5155 . + . ID=gene-AB69_RS22560;Name=AB69_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22560;old_locus_tag=AB69_4947 NZ_JHDO01000013.1 Protein Homology CDS 4880 5155 . + 0 ID=cds-WP_000239529.1;Parent=gene-AB69_RS22560;Dbxref=GenBank:WP_000239529.1;Name=WP_000239529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241708.1;locus_tag=AB69_RS22560;product=hypothetical protein;protein_id=WP_000239529.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 5293 6084 . - . ID=gene-AB69_RS22555;Name=AB69_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22555;old_locus_tag=AB69_4948 NZ_JHDO01000013.1 Protein Homology CDS 5293 6084 . - 0 ID=cds-WP_032231262.1;Parent=gene-AB69_RS22555;Dbxref=GenBank:WP_032231262.1;Name=WP_032231262.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016493.1;locus_tag=AB69_RS22555;product=site-specific integrase;protein_id=WP_032231262.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 6081 6587 . - . ID=gene-AB69_RS22550;Name=AB69_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22550;old_locus_tag=AB69_4949 NZ_JHDO01000013.1 Protein Homology CDS 6081 6587 . - 0 ID=cds-WP_235836326.1;Parent=gene-AB69_RS22550;Dbxref=GenBank:WP_235836326.1;Name=WP_235836326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001385965.1;locus_tag=AB69_RS22550;product=hypothetical protein;protein_id=WP_235836326.1;transl_table=11 NZ_JHDO01000013.1 RefSeq gene 6578 7127 . + . ID=gene-AB69_RS22545;Name=AB69_RS22545;end_range=7127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22545;old_locus_tag=AB69_4950;partial=true NZ_JHDO01000013.1 Protein Homology CDS 6578 7127 . + 0 ID=cds-WP_016247604.1;Parent=gene-AB69_RS22545;Dbxref=GenBank:WP_016247604.1;Name=WP_016247604.1;Ontology_term=GO:0006313,GO:0004803;end_range=7127,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22545;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_016247604.1;transl_table=11 ##sequence-region NZ_JHDO01000014.1 1 2224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000014.1 RefSeq region 1 2224 . + . ID=NZ_JHDO01000014.1:1..2224;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000014.1 RefSeq gene 1 240 . + . ID=gene-AB69_RS22540;Name=AB69_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22540;old_locus_tag=AB69_4951;partial=true;start_range=.,1 NZ_JHDO01000014.1 Protein Homology CDS 1 240 . + 0 ID=cds-WP_248785133.1;Parent=gene-AB69_RS22540;Dbxref=GenBank:WP_248785133.1;Name=WP_248785133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_145811.1;locus_tag=AB69_RS22540;partial=true;product=hypothetical protein;protein_id=WP_248785133.1;start_range=.,1;transl_table=11 NZ_JHDO01000014.1 RefSeq pseudogene 257 712 . + . ID=gene-AB69_RS0123205;Name=AB69_RS0123205;end_range=712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123205;partial=true;pseudo=true NZ_JHDO01000014.1 Protein Homology CDS 257 712 . + 0 ID=cds-AB69_RS0123205;Parent=gene-AB69_RS0123205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=712,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=AB69_RS0123205;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000014.1 RefSeq gene 933 1283 . - . ID=gene-AB69_RS22535;Name=AB69_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22535;old_locus_tag=AB69_4953 NZ_JHDO01000014.1 Protein Homology CDS 933 1283 . - 0 ID=cds-WP_032231645.1;Parent=gene-AB69_RS22535;Dbxref=GenBank:WP_032231645.1;Name=WP_032231645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=AB69_RS22535;product=DNA-binding protein;protein_id=WP_032231645.1;transl_table=11 NZ_JHDO01000014.1 RefSeq pseudogene 1270 1614 . - . ID=gene-AB69_RS30110;Name=AB69_RS30110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30110;pseudo=true NZ_JHDO01000014.1 Protein Homology CDS 1270 1614 . - 0 ID=cds-AB69_RS30110;Parent=gene-AB69_RS30110;Note=internal stop;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026082.1;locus_tag=AB69_RS30110;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JHDO01000014.1 RefSeq pseudogene 1829 2224 . + . ID=gene-AB69_RS22530;Name=AB69_RS22530;end_range=2224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22530;old_locus_tag=AB69_4955;partial=true;pseudo=true;start_range=.,1829 NZ_JHDO01000014.1 Protein Homology CDS 1829 2224 . + 0 ID=cds-AB69_RS22530;Parent=gene-AB69_RS22530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2224,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=AB69_RS22530;partial=true;product=transposase;pseudo=true;start_range=.,1829;transl_table=11 ##sequence-region NZ_JHDO01000015.1 1 914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000015.1 RefSeq region 1 914 . + . ID=NZ_JHDO01000015.1:1..914;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000015.1 RefSeq pseudogene 1 211 . - . ID=gene-AB69_RS22525;Name=AB69_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22525;old_locus_tag=AB69_4956;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000015.1 Protein Homology CDS 1 211 . - 0 ID=cds-AB69_RS22525;Parent=gene-AB69_RS22525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AB69_RS22525;partial=true;product=ribose 1%2C5-bisphosphokinase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000015.1 RefSeq gene 211 914 . - . ID=gene-AB69_RS22520;Name=phnM;end_range=914,.;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AB69_RS22520;old_locus_tag=AB69_4957;partial=true NZ_JHDO01000015.1 Protein Homology CDS 211 914 . - 2 ID=cds-WP_032235616.1;Parent=gene-AB69_RS22520;Dbxref=GenBank:WP_032235616.1;Name=WP_032235616.1;Ontology_term=GO:0019700,GO:0016810;end_range=914,.;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068563.1;locus_tag=AB69_RS22520;partial=true;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_032235616.1;transl_table=11 ##sequence-region NZ_JHDO01000016.1 1 2054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000016.1 RefSeq region 1 2054 . + . ID=NZ_JHDO01000016.1:1..2054;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000016.1 RefSeq gene 173 1075 . - . ID=gene-AB69_RS22515;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB69_RS22515;old_locus_tag=AB69_4958 NZ_JHDO01000016.1 Protein Homology CDS 173 1075 . - 0 ID=cds-WP_000832247.1-2;Parent=gene-AB69_RS22515;Dbxref=GenBank:WP_000832247.1;Name=WP_000832247.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418740.1;locus_tag=AB69_RS22515;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832247.1;transl_table=11 NZ_JHDO01000016.1 RefSeq gene 1095 1538 . - . ID=gene-AB69_RS22510;Name=AB69_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22510;old_locus_tag=AB69_4959 NZ_JHDO01000016.1 Protein Homology CDS 1095 1538 . - 0 ID=cds-WP_077897989.1-2;Parent=gene-AB69_RS22510;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AB69_RS22510;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11 NZ_JHDO01000016.1 RefSeq gene 1611 2054 . - . ID=gene-AB69_RS22505;Name=fimF;end_range=2054,.;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AB69_RS22505;old_locus_tag=AB69_4960;partial=true NZ_JHDO01000016.1 Protein Homology CDS 1611 2054 . - 0 ID=cds-WP_032235618.1;Parent=gene-AB69_RS22505;Dbxref=GenBank:WP_032235618.1;Name=WP_032235618.1;end_range=2054,.;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418738.1;locus_tag=AB69_RS22505;partial=true;product=type 1 fimbria minor subunit FimF;protein_id=WP_032235618.1;transl_table=11 ##sequence-region NZ_JHDO01000017.1 1 11141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000017.1 RefSeq region 1 11141 . + . ID=NZ_JHDO01000017.1:1..11141;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000017.1 RefSeq gene 1 427 . + . ID=gene-AB69_RS0123220;Name=AB69_RS0123220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123220;old_locus_tag=AB69_4961;partial=true;start_range=.,1 NZ_JHDO01000017.1 Protein Homology CDS 1 427 . + 1 ID=cds-WP_032174702.1;Parent=gene-AB69_RS0123220;Dbxref=GenBank:WP_032174702.1;Name=WP_032174702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AB69_RS0123220;partial=true;product=DNA-binding domain-containing protein;protein_id=WP_032174702.1;start_range=.,1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 412 1272 . + . ID=gene-AB69_RS22500;Name=AB69_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22500;old_locus_tag=AB69_4962 NZ_JHDO01000017.1 Protein Homology CDS 412 1272 . + 0 ID=cds-WP_000493383.1;Parent=gene-AB69_RS22500;Dbxref=GenBank:WP_000493383.1;Name=WP_000493383.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493383.1;locus_tag=AB69_RS22500;product=EamA family transporter;protein_id=WP_000493383.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 1304 2503 . - . ID=gene-AB69_RS22495;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=AB69_RS22495;old_locus_tag=AB69_4963 NZ_JHDO01000017.1 Protein Homology CDS 1304 2503 . - 0 ID=cds-WP_000804064.1;Parent=gene-AB69_RS22495;Dbxref=GenBank:WP_000804064.1;Name=WP_000804064.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=AB69_RS22495;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_000804064.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 2609 3259 . + . ID=gene-AB69_RS22490;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=AB69_RS22490;old_locus_tag=AB69_4964 NZ_JHDO01000017.1 Protein Homology CDS 2609 3259 . + 0 ID=cds-WP_000164043.1;Parent=gene-AB69_RS22490;Dbxref=GenBank:WP_000164043.1;Name=WP_000164043.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=AB69_RS22490;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_000164043.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 4536 4970 . - . ID=gene-AB69_RS22485;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=AB69_RS22485;old_locus_tag=AB69_4965 NZ_JHDO01000017.1 Protein Homology CDS 4536 4970 . - 0 ID=cds-WP_000429836.1;Parent=gene-AB69_RS22485;Dbxref=GenBank:WP_000429836.1;Name=WP_000429836.1;Ontology_term=GO:0006355,GO:0046689,GO:0003677,GO:0045340;gbkey=CDS;gene=merR;go_function=DNA binding|0003677||IEA,mercury ion binding|0045340||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1;locus_tag=AB69_RS22485;product=Hg(II)-responsive transcriptional regulator;protein_id=WP_000429836.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 5042 5392 . + . ID=gene-AB69_RS22480;Name=AB69_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22480;old_locus_tag=AB69_4966 NZ_JHDO01000017.1 Protein Homology CDS 5042 5392 . + 0 ID=cds-WP_001294663.1;Parent=gene-AB69_RS22480;Dbxref=GenBank:WP_001294663.1;Name=WP_001294663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011111453.1;locus_tag=AB69_RS22480;product=mercuric transport protein MerT;protein_id=WP_001294663.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 5406 5681 . + . ID=gene-AB69_RS22475;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=AB69_RS22475;old_locus_tag=AB69_4967 NZ_JHDO01000017.1 Protein Homology CDS 5406 5681 . + 0 ID=cds-WP_000732292.1;Parent=gene-AB69_RS22475;Dbxref=GenBank:WP_000732292.1;Name=WP_000732292.1;Ontology_term=GO:0046689,GO:0045340,GO:0042597;gbkey=CDS;gene=merP;go_component=periplasmic space|0042597||IEA;go_function=mercury ion binding|0045340||IEA;go_process=response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636750.1;locus_tag=AB69_RS22475;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_000732292.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 5717 6139 . + . ID=gene-AB69_RS22470;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=AB69_RS22470;old_locus_tag=AB69_4968 NZ_JHDO01000017.1 Protein Homology CDS 5717 6139 . + 0 ID=cds-WP_001340589.1;Parent=gene-AB69_RS22470;Dbxref=GenBank:WP_001340589.1;Name=WP_001340589.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239395.1;locus_tag=AB69_RS22470;product=organomercurial transporter MerC;protein_id=WP_001340589.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 6191 7885 . + . ID=gene-AB69_RS22465;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=AB69_RS22465;old_locus_tag=AB69_4969 NZ_JHDO01000017.1 Protein Homology CDS 6191 7885 . + 0 ID=cds-WP_000105636.1;Parent=gene-AB69_RS22465;Dbxref=GenBank:WP_000105636.1;Name=WP_000105636.1;Ontology_term=GO:0046689,GO:0050787,GO:0016152,GO:0045340,GO:0050660,GO:0050661;gbkey=CDS;gene=merA;go_function=mercury (II) reductase (NADP+) activity|0016152||IEA,mercury ion binding|0045340||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=response to mercury ion|0046689||IEA,detoxification of mercury ion|0050787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=AB69_RS22465;product=mercury(II) reductase;protein_id=WP_000105636.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 7903 8265 . + . ID=gene-AB69_RS22460;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=AB69_RS22460;old_locus_tag=AB69_4970 NZ_JHDO01000017.1 Protein Homology CDS 7903 8265 . + 0 ID=cds-WP_001277456.1;Parent=gene-AB69_RS22460;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=AB69_RS22460;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 8262 8498 . + . ID=gene-AB69_RS22455;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=AB69_RS22455;old_locus_tag=AB69_4971 NZ_JHDO01000017.1 Protein Homology CDS 8262 8498 . + 0 ID=cds-WP_000993386.1;Parent=gene-AB69_RS22455;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102820.1;locus_tag=AB69_RS22455;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 8534 9202 . + . ID=gene-AB69_RS22450;Name=AB69_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22450;old_locus_tag=AB69_4972 NZ_JHDO01000017.1 Protein Homology CDS 8534 9202 . + 0 ID=cds-WP_001300294.1;Parent=gene-AB69_RS22450;Dbxref=GenBank:WP_001300294.1;Name=WP_001300294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AB69_RS22450;product=EAL domain-containing protein;protein_id=WP_001300294.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 9277 10545 . + . ID=gene-AB69_RS22445;Name=AB69_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22445;old_locus_tag=AB69_4973 NZ_JHDO01000017.1 Protein Homology CDS 9277 10545 . + 0 ID=cds-WP_000179845.1;Parent=gene-AB69_RS22445;Dbxref=GenBank:WP_000179845.1;Name=WP_000179845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AB69_RS22445;product=DNA-binding domain-containing protein;protein_id=WP_000179845.1;transl_table=11 NZ_JHDO01000017.1 RefSeq gene 10592 11141 . + . ID=gene-AB69_RS22440;Name=AB69_RS22440;end_range=11141,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22440;old_locus_tag=AB69_4974;partial=true NZ_JHDO01000017.1 Protein Homology CDS 10592 11141 . + 0 ID=cds-WP_016247604.1-2;Parent=gene-AB69_RS22440;Dbxref=GenBank:WP_016247604.1;Name=WP_016247604.1;Ontology_term=GO:0006313,GO:0004803;end_range=11141,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22440;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_016247604.1;transl_table=11 ##sequence-region NZ_JHDO01000018.1 1 1680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000018.1 RefSeq region 1 1680 . + . ID=NZ_JHDO01000018.1:1..1680;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000018.1 RefSeq gene 19 366 . - . ID=gene-AB69_RS22435;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB69_RS22435;old_locus_tag=AB69_4975 NZ_JHDO01000018.1 Protein Homology CDS 19 366 . - 0 ID=cds-WP_000624622.1;Parent=gene-AB69_RS22435;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB69_RS22435;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JHDO01000018.1 RefSeq gene 366 1043 . - . ID=gene-AB69_RS22430;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB69_RS22430;old_locus_tag=AB69_4976 NZ_JHDO01000018.1 Protein Homology CDS 366 1043 . - 0 ID=cds-WP_001339397.1-2;Parent=gene-AB69_RS22430;Dbxref=GenBank:WP_001339397.1;Name=WP_001339397.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AB69_RS22430;product=IS66-like element accessory protein TnpA;protein_id=WP_001339397.1;transl_table=11 NZ_JHDO01000018.1 RefSeq pseudogene 1088 1426 . + . ID=gene-AB69_RS25975;Name=AB69_RS25975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS25975;partial=true;pseudo=true;start_range=.,1088 NZ_JHDO01000018.1 Protein Homology CDS 1088 1426 . + 0 ID=cds-AB69_RS25975;Parent=gene-AB69_RS25975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=AB69_RS25975;partial=true;product=transposase;pseudo=true;start_range=.,1088;transl_table=11 ##sequence-region NZ_JHDO01000019.1 1 5091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000019.1 RefSeq region 1 5091 . + . ID=NZ_JHDO01000019.1:1..5091;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000019.1 RefSeq pseudogene 1 129 . + . ID=gene-AB69_RS22425;Name=AB69_RS22425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22425;old_locus_tag=AB69_4978;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000019.1 Protein Homology CDS 1 129 . + 0 ID=cds-AB69_RS22425;Parent=gene-AB69_RS22425;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22425;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000019.1 RefSeq pseudogene 181 405 . - . ID=gene-AB69_RS22420;Name=AB69_RS22420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22420;old_locus_tag=AB69_4979;partial=true;pseudo=true;start_range=.,181 NZ_JHDO01000019.1 Protein Homology CDS 181 405 . - 0 ID=cds-AB69_RS22420;Parent=gene-AB69_RS22420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AB69_RS22420;partial=true;product=recombinase family protein;pseudo=true;start_range=.,181;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 531 731 . - . ID=gene-AB69_RS30775;Name=AB69_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30775;old_locus_tag=AB69_4980 NZ_JHDO01000019.1 Protein Homology CDS 531 731 . - 0 ID=cds-WP_000993264.1;Parent=gene-AB69_RS30775;Dbxref=GenBank:WP_000993264.1;Name=WP_000993264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993264.1;locus_tag=AB69_RS30775;product=DUF3330 domain-containing protein;protein_id=WP_000993264.1;transl_table=11 NZ_JHDO01000019.1 RefSeq pseudogene 831 1115 . - . ID=gene-AB69_RS30780;Name=AB69_RS30780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30780;partial=true;pseudo=true;start_range=.,831 NZ_JHDO01000019.1 Protein Homology CDS 831 1115 . - 0 ID=cds-AB69_RS30780;Parent=gene-AB69_RS30780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=AB69_RS30780;partial=true;product=hypothetical protein;pseudo=true;start_range=.,831;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 1084 2097 . - . ID=gene-AB69_RS22410;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=AB69_RS22410;old_locus_tag=AB69_4981 NZ_JHDO01000019.1 Protein Homology CDS 1084 2097 . - 0 ID=cds-WP_000845048.1;Parent=gene-AB69_RS22410;Dbxref=GenBank:WP_000845048.1;Name=WP_000845048.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1;locus_tag=AB69_RS22410;product=class 1 integron integrase IntI1;protein_id=WP_000845048.1;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 2255 2728 . + . ID=gene-AB69_RS0123250;Name=dfrA7;gbkey=Gene;gene=dfrA7;gene_biotype=protein_coding;locus_tag=AB69_RS0123250 NZ_JHDO01000019.1 Protein Homology CDS 2255 2728 . + 0 ID=cds-WP_000703418.1;Parent=gene-AB69_RS0123250;Dbxref=GenBank:WP_000703418.1;Name=WP_000703418.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA7;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389366.1;locus_tag=AB69_RS0123250;product=trimethoprim-resistant dihydrofolate reductase DfrA7;protein_id=WP_000703418.1;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 2958 3305 . + . ID=gene-AB69_RS0123255;Name=AB69_RS0123255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123255 NZ_JHDO01000019.1 Protein Homology CDS 2958 3305 . + 0 ID=cds-WP_000679427.1;Parent=gene-AB69_RS0123255;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=AB69_RS0123255;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 3299 4138 . + . ID=gene-AB69_RS22405;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=AB69_RS22405;old_locus_tag=AB69_4982 NZ_JHDO01000019.1 Protein Homology CDS 3299 4138 . + 0 ID=cds-WP_000259031.1;Parent=gene-AB69_RS22405;Dbxref=GenBank:WP_000259031.1;Name=WP_000259031.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=AB69_RS22405;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=WP_000259031.1;transl_table=11 NZ_JHDO01000019.1 RefSeq gene 4372 5076 . - . ID=gene-AB69_RS22400;Name=AB69_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22400;old_locus_tag=AB69_4983 NZ_JHDO01000019.1 Protein Homology CDS 4372 5076 . - 0 ID=cds-WP_001067855.1;Parent=gene-AB69_RS22400;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22400;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_JHDO01000020.1 1 1233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000020.1 RefSeq region 1 1233 . + . ID=NZ_JHDO01000020.1:1..1233;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000020.1 RefSeq gene 287 1233 . + . ID=gene-AB69_RS22395;Name=AB69_RS22395;end_range=1233,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS22395;old_locus_tag=AB69_4984;partial=true NZ_JHDO01000020.1 cmsearch rRNA 287 1233 . + . ID=rna-AB69_RS22395;Parent=gene-AB69_RS22395;Dbxref=RFAM:RF00177;end_range=1233,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS22395;partial=true;product=16S ribosomal RNA NZ_JHDO01000020.1 cmsearch exon 287 1233 . + . ID=exon-AB69_RS22395-1;Parent=rna-AB69_RS22395;Dbxref=RFAM:RF00177;end_range=1233,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS22395;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000021.1 1 1287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000021.1 RefSeq region 1 1287 . + . ID=NZ_JHDO01000021.1:1..1287;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000021.1 RefSeq gene 1 893 . + . ID=gene-AB69_RS22390;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AB69_RS22390;old_locus_tag=AB69_4985;partial=true;start_range=.,1 NZ_JHDO01000021.1 Protein Homology CDS 1 893 . + 2 ID=cds-WP_032180705.1;Parent=gene-AB69_RS22390;Dbxref=GenBank:WP_032180705.1;Name=WP_032180705.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AB69_RS22390;partial=true;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_032180705.1;start_range=.,1;transl_table=11 NZ_JHDO01000021.1 RefSeq gene 1172 1287 . + . ID=gene-AB69_RS30115;Name=AB69_RS30115;end_range=1287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30115;old_locus_tag=AB69_4986;partial=true NZ_JHDO01000021.1 Protein Homology CDS 1172 1287 . + 0 ID=cds-WP_001490832.1;Parent=gene-AB69_RS30115;Dbxref=GenBank:WP_001490832.1;Name=WP_001490832.1;end_range=1287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414887.2;locus_tag=AB69_RS30115;partial=true;product=hypothetical protein;protein_id=WP_001490832.1;transl_table=11 ##sequence-region NZ_JHDO01000022.1 1 8297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000022.1 RefSeq region 1 8297 . + . ID=NZ_JHDO01000022.1:1..8297;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000022.1 RefSeq gene 1 204 . + . ID=gene-AB69_RS22385;Name=AB69_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22385;old_locus_tag=AB69_4987;partial=true;start_range=.,1 NZ_JHDO01000022.1 Protein Homology CDS 1 204 . + 0 ID=cds-WP_031969424.1;Parent=gene-AB69_RS22385;Dbxref=GenBank:WP_031969424.1;Name=WP_031969424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22385;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_031969424.1;start_range=.,1;transl_table=11 NZ_JHDO01000022.1 RefSeq pseudogene 258 515 . + . ID=gene-AB69_RS29920;Name=AB69_RS29920;end_range=515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29920;partial=true;pseudo=true;start_range=.,258 NZ_JHDO01000022.1 Protein Homology CDS 258 515 . + 0 ID=cds-AB69_RS29920;Parent=gene-AB69_RS29920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_061586541.1;locus_tag=AB69_RS29920;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;start_range=.,258;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 622 1458 . - . ID=gene-AB69_RS22380;Name=AB69_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22380;old_locus_tag=AB69_4988 NZ_JHDO01000022.1 Protein Homology CDS 622 1458 . - 0 ID=cds-WP_000480972.1;Parent=gene-AB69_RS22380;Dbxref=GenBank:WP_000480972.1;Name=WP_000480972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AB69_RS22380;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480972.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 1458 2261 . - . ID=gene-AB69_RS22375;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AB69_RS22375;old_locus_tag=AB69_4989 NZ_JHDO01000022.1 Protein Homology CDS 1458 2261 . - 0 ID=cds-WP_001082319.1;Parent=gene-AB69_RS22375;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AB69_RS22375;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 2322 3137 . - . ID=gene-AB69_RS22370;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=AB69_RS22370;old_locus_tag=AB69_4990 NZ_JHDO01000022.1 Protein Homology CDS 2322 3137 . - 0 ID=cds-WP_001043260.1;Parent=gene-AB69_RS22370;Dbxref=GenBank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=AB69_RS22370;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 3474 3677 . + . ID=gene-AB69_RS0123260;Name=AB69_RS0123260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123260 NZ_JHDO01000022.1 GeneMarkS-2+ CDS 3474 3677 . + 0 ID=cds-WP_000131876.1;Parent=gene-AB69_RS0123260;Dbxref=GenBank:WP_000131876.1;Name=WP_000131876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS0123260;product=hypothetical protein;protein_id=WP_000131876.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 3668 3889 . + . ID=gene-AB69_RS0123265;Name=AB69_RS0123265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123265 NZ_JHDO01000022.1 GeneMarkS-2+ CDS 3668 3889 . + 0 ID=cds-WP_001251694.1;Parent=gene-AB69_RS0123265;Dbxref=GenBank:WP_001251694.1;Name=WP_001251694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS0123265;product=hypothetical protein;protein_id=WP_001251694.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 4124 5110 . - . ID=gene-AB69_RS0123270;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=AB69_RS0123270 NZ_JHDO01000022.1 Protein Homology CDS 4124 5110 . - 0 ID=cds-WP_000852935.1;Parent=gene-AB69_RS0123270;Dbxref=GenBank:WP_000852935.1;Name=WP_000852935.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024818.1;locus_tag=AB69_RS0123270;product=MobV family relaxase;protein_id=WP_000852935.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 6580 6915 . - . ID=gene-AB69_RS0123280;Name=AB69_RS0123280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123280 NZ_JHDO01000022.1 Protein Homology CDS 6580 6915 . - 0 ID=cds-WP_001340323.1;Parent=gene-AB69_RS0123280;Dbxref=GenBank:WP_001340323.1;Name=WP_001340323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579148.1;locus_tag=AB69_RS0123280;product=hypothetical protein;protein_id=WP_001340323.1;transl_table=11 NZ_JHDO01000022.1 RefSeq gene 7253 8233 . + . ID=gene-AB69_RS22365;Name=AB69_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22365;old_locus_tag=AB69_4995 NZ_JHDO01000022.1 Protein Homology CDS 7253 8233 . + 0 ID=cds-WP_001218107.1;Parent=gene-AB69_RS22365;Dbxref=GenBank:WP_001218107.1;Name=WP_001218107.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=AB69_RS22365;product=plasmid segregation protein ParM;protein_id=WP_001218107.1;transl_table=11 ##sequence-region NZ_JHDO01000023.1 1 11772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000023.1 RefSeq region 1 11772 . + . ID=NZ_JHDO01000023.1:1..11772;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000023.1 RefSeq gene 1 204 . + . ID=gene-AB69_RS22360;Name=AB69_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22360;old_locus_tag=AB69_4996;partial=true;start_range=.,1 NZ_JHDO01000023.1 Protein Homology CDS 1 204 . + 0 ID=cds-WP_113706129.1;Parent=gene-AB69_RS22360;Dbxref=GenBank:WP_113706129.1;Name=WP_113706129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22360;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_113706129.1;start_range=.,1;transl_table=11 NZ_JHDO01000023.1 RefSeq pseudogene 257 457 . - . ID=gene-AB69_RS30120;Name=AB69_RS30120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30120;partial=true;pseudo=true;start_range=.,257 NZ_JHDO01000023.1 Protein Homology CDS 257 457 . - 0 ID=cds-AB69_RS30120;Parent=gene-AB69_RS30120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796228.1;locus_tag=AB69_RS30120;partial=true;product=hypothetical protein;pseudo=true;start_range=.,257;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 501 851 . - . ID=gene-AB69_RS22355;Name=AB69_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22355;old_locus_tag=AB69_4997 NZ_JHDO01000023.1 Protein Homology CDS 501 851 . - 0 ID=cds-WP_032231268.1;Parent=gene-AB69_RS22355;Dbxref=GenBank:WP_032231268.1;Name=WP_032231268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493378.1;locus_tag=AB69_RS22355;product=hypothetical protein;protein_id=WP_032231268.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 1441 1638 . + . ID=gene-AB69_RS0123285;Name=AB69_RS0123285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123285 NZ_JHDO01000023.1 Protein Homology CDS 1441 1638 . + 0 ID=cds-WP_000215657.1;Parent=gene-AB69_RS0123285;Dbxref=GenBank:WP_000215657.1;Name=WP_000215657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215657.1;locus_tag=AB69_RS0123285;product=hypothetical protein;protein_id=WP_000215657.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 1635 1928 . - . ID=gene-AB69_RS22350;Name=AB69_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22350;old_locus_tag=AB69_4998 NZ_JHDO01000023.1 Protein Homology CDS 1635 1928 . - 0 ID=cds-WP_032231269.1;Parent=gene-AB69_RS22350;Dbxref=GenBank:WP_032231269.1;Name=WP_032231269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642771.1;locus_tag=AB69_RS22350;product=hypothetical protein;protein_id=WP_032231269.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 1948 3081 . - . ID=gene-AB69_RS22345;Name=AB69_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22345;old_locus_tag=AB69_4999 NZ_JHDO01000023.1 Protein Homology CDS 1948 3081 . - 0 ID=cds-WP_032231270.1;Parent=gene-AB69_RS22345;Dbxref=GenBank:WP_032231270.1;Name=WP_032231270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483870.1;locus_tag=AB69_RS22345;product=DUF3800 domain-containing protein;protein_id=WP_032231270.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 3344 6463 . - . ID=gene-AB69_RS22340;Name=AB69_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22340;old_locus_tag=AB69_5000 NZ_JHDO01000023.1 Protein Homology CDS 3344 6463 . - 0 ID=cds-WP_032231271.1;Parent=gene-AB69_RS22340;Dbxref=GenBank:WP_032231271.1;Name=WP_032231271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467135.1;locus_tag=AB69_RS22340;product=hypothetical protein;protein_id=WP_032231271.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 6769 6999 . + . ID=gene-AB69_RS22335;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=AB69_RS22335;old_locus_tag=AB69_5001 NZ_JHDO01000023.1 Protein Homology CDS 6769 6999 . + 0 ID=cds-WP_001261287.1;Parent=gene-AB69_RS22335;Dbxref=GenBank:WP_001261287.1;Name=WP_001261287.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=AB69_RS22335;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_001261287.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 6996 7412 . + . ID=gene-AB69_RS22330;Name=AB69_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22330;old_locus_tag=AB69_5002 NZ_JHDO01000023.1 Protein Homology CDS 6996 7412 . + 0 ID=cds-WP_001044768.1;Parent=gene-AB69_RS22330;Dbxref=GenBank:WP_001044768.1;Name=WP_001044768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=AB69_RS22330;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_001044768.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 7574 9712 . - . ID=gene-AB69_RS22325;Name=AB69_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22325;old_locus_tag=AB69_5003 NZ_JHDO01000023.1 Protein Homology CDS 7574 9712 . - 0 ID=cds-WP_032231273.1;Parent=gene-AB69_RS22325;Dbxref=GenBank:WP_032231273.1;Name=WP_032231273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350636.1;locus_tag=AB69_RS22325;product=AAA family ATPase;protein_id=WP_032231273.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 10066 10323 . + . ID=gene-AB69_RS22320;Name=AB69_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22320;old_locus_tag=AB69_5004 NZ_JHDO01000023.1 Protein Homology CDS 10066 10323 . + 0 ID=cds-WP_000371887.1;Parent=gene-AB69_RS22320;Dbxref=GenBank:WP_000371887.1;Name=WP_000371887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343099.1;locus_tag=AB69_RS22320;product=hypothetical protein;protein_id=WP_000371887.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 10323 10913 . + . ID=gene-AB69_RS0123290;Name=AB69_RS0123290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123290 NZ_JHDO01000023.1 Protein Homology CDS 10323 10913 . + 0 ID=cds-WP_000194548.1;Parent=gene-AB69_RS0123290;Dbxref=GenBank:WP_000194548.1;Name=WP_000194548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=AB69_RS0123290;product=hypothetical protein;protein_id=WP_000194548.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 10931 11278 . - . ID=gene-AB69_RS22315;Name=AB69_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22315;old_locus_tag=AB69_5006 NZ_JHDO01000023.1 Protein Homology CDS 10931 11278 . - 0 ID=cds-WP_000142443.1;Parent=gene-AB69_RS22315;Dbxref=GenBank:WP_000142443.1;Name=WP_000142443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=AB69_RS22315;product=DUF6404 family protein;protein_id=WP_000142443.1;transl_table=11 NZ_JHDO01000023.1 RefSeq gene 11505 11772 . - . ID=gene-AB69_RS22310;Name=AB69_RS22310;end_range=11772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22310;old_locus_tag=AB69_5008;partial=true NZ_JHDO01000023.1 Protein Homology CDS 11505 11772 . - 1 ID=cds-WP_000212398.1;Parent=gene-AB69_RS22310;Dbxref=GenBank:WP_000212398.1;Name=WP_000212398.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=11772,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS22310;partial=true;product=IS1 family transposase;protein_id=WP_000212398.1;transl_table=11 ##sequence-region NZ_JHDO01000024.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000024.1 RefSeq region 1 3597 . + . ID=NZ_JHDO01000024.1:1..3597;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000024.1 RefSeq gene 1 1611 . - . ID=gene-AB69_RS22305;Name=AB69_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22305;old_locus_tag=AB69_5009;partial=true;start_range=.,1 NZ_JHDO01000024.1 Protein Homology CDS 1 1611 . - 0 ID=cds-WP_032235628.1;Parent=gene-AB69_RS22305;Dbxref=GenBank:WP_032235628.1;Name=WP_032235628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB69_RS22305;partial=true;product=MASE1 domain-containing protein;protein_id=WP_032235628.1;start_range=.,1;transl_table=11 NZ_JHDO01000024.1 RefSeq gene 1820 1895 . - . ID=gene-AB69_RS22300;Name=AB69_RS22300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22300;old_locus_tag=AB69_5010 NZ_JHDO01000024.1 tRNAscan-SE tRNA 1820 1895 . - . ID=rna-AB69_RS22300;Parent=gene-AB69_RS22300;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22300;product=tRNA-Ala NZ_JHDO01000024.1 tRNAscan-SE exon 1820 1895 . - . ID=exon-AB69_RS22300-1;Parent=rna-AB69_RS22300;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22300;product=tRNA-Ala NZ_JHDO01000024.1 RefSeq gene 1935 2010 . - . ID=gene-AB69_RS22295;Name=AB69_RS22295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22295;old_locus_tag=AB69_5011 NZ_JHDO01000024.1 tRNAscan-SE tRNA 1935 2010 . - . ID=rna-AB69_RS22295;Parent=gene-AB69_RS22295;anticodon=(pos:complement(1975..1977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22295;product=tRNA-Ala NZ_JHDO01000024.1 tRNAscan-SE exon 1935 2010 . - . ID=exon-AB69_RS22295-1;Parent=rna-AB69_RS22295;anticodon=(pos:complement(1975..1977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22295;product=tRNA-Ala NZ_JHDO01000024.1 RefSeq gene 2231 2590 . + . ID=gene-AB69_RS22290;Name=AB69_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22290;old_locus_tag=AB69_5012 NZ_JHDO01000024.1 Protein Homology CDS 2231 2590 . + 0 ID=cds-WP_000472021.1;Parent=gene-AB69_RS22290;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB69_RS22290;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDO01000024.1 RefSeq gene 2592 2984 . + . ID=gene-AB69_RS22285;Name=AB69_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22285;old_locus_tag=AB69_5013 NZ_JHDO01000024.1 Protein Homology CDS 2592 2984 . + 0 ID=cds-WP_000826503.1;Parent=gene-AB69_RS22285;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB69_RS22285;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDO01000024.1 RefSeq pseudogene 3036 3597 . - . ID=gene-AB69_RS22280;Name=gltX;end_range=3597,.;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=AB69_RS22280;old_locus_tag=AB69_5014;partial=true;pseudo=true NZ_JHDO01000024.1 Protein Homology CDS 3036 3597 . - 1 ID=cds-AB69_RS22280;Parent=gene-AB69_RS22280;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3597,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB69_RS22280;partial=true;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000025.1 1 5071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000025.1 RefSeq region 1 5071 . + . ID=NZ_JHDO01000025.1:1..5071;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000025.1 RefSeq gene 1 1119 . + . ID=gene-AB69_RS22275;Name=AB69_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22275;old_locus_tag=AB69_5015;partial=true;start_range=.,1 NZ_JHDO01000025.1 Protein Homology CDS 1 1119 . + 0 ID=cds-WP_050428482.1;Parent=gene-AB69_RS22275;Dbxref=GenBank:WP_050428482.1;Name=WP_050428482.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB69_RS22275;partial=true;product=IS66-like element ISCro1 family transposase;protein_id=WP_050428482.1;start_range=.,1;transl_table=11 NZ_JHDO01000025.1 RefSeq gene 1364 3304 . - . ID=gene-AB69_RS22270;Name=AB69_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22270;old_locus_tag=AB69_5016 NZ_JHDO01000025.1 Protein Homology CDS 1364 3304 . - 0 ID=cds-WP_001399645.1;Parent=gene-AB69_RS22270;Dbxref=GenBank:WP_001399645.1;Name=WP_001399645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399645.1;locus_tag=AB69_RS22270;product=DUF262 domain-containing protein;protein_id=WP_001399645.1;transl_table=11 NZ_JHDO01000025.1 RefSeq gene 3651 3950 . - . ID=gene-AB69_RS22265;Name=AB69_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22265;old_locus_tag=AB69_5017 NZ_JHDO01000025.1 Protein Homology CDS 3651 3950 . - 0 ID=cds-WP_001399644.1;Parent=gene-AB69_RS22265;Dbxref=GenBank:WP_001399644.1;Name=WP_001399644.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528606.1;locus_tag=AB69_RS22265;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001399644.1;transl_table=11 NZ_JHDO01000025.1 RefSeq gene 3940 4203 . - . ID=gene-AB69_RS22260;Name=AB69_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22260;old_locus_tag=AB69_5018 NZ_JHDO01000025.1 Protein Homology CDS 3940 4203 . - 0 ID=cds-WP_001399643.1;Parent=gene-AB69_RS22260;Dbxref=GenBank:WP_001399643.1;Name=WP_001399643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089474.1;locus_tag=AB69_RS22260;product=hypothetical protein;protein_id=WP_001399643.1;transl_table=11 NZ_JHDO01000025.1 RefSeq pseudogene 4223 4360 . - . ID=gene-AB69_RS30125;Name=AB69_RS30125;end_range=4360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30125;partial=true;pseudo=true NZ_JHDO01000025.1 Protein Homology CDS 4223 4360 . - 0 ID=cds-AB69_RS30125;Parent=gene-AB69_RS30125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077272.1;locus_tag=AB69_RS30125;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000026.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000026.1 RefSeq region 1 2047 . + . ID=NZ_JHDO01000026.1:1..2047;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000026.1 RefSeq pseudogene 1 464 . - . ID=gene-AB69_RS22255;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=pseudogene;locus_tag=AB69_RS22255;old_locus_tag=AB69_5020;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000026.1 Protein Homology CDS 1 464 . - 0 ID=cds-AB69_RS22255;Parent=gene-AB69_RS22255;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB69_RS22255;partial=true;product=cysteine desulfurase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000026.1 RefSeq gene 576 1064 . - . ID=gene-AB69_RS22250;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB69_RS22250;old_locus_tag=AB69_5021 NZ_JHDO01000026.1 Protein Homology CDS 576 1064 . - 0 ID=cds-WP_001241357.1;Parent=gene-AB69_RS22250;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB69_RS22250;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JHDO01000026.1 RefSeq gene 1425 2047 . - . ID=gene-AB69_RS22245;Name=trmJ;end_range=2047,.;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AB69_RS22245;old_locus_tag=AB69_5022;partial=true NZ_JHDO01000026.1 Protein Homology CDS 1425 2047 . - 2 ID=cds-WP_032213604.1;Parent=gene-AB69_RS22245;Dbxref=GenBank:WP_032213604.1;Name=WP_032213604.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;end_range=2047,.;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AB69_RS22245;partial=true;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_032213604.1;transl_table=11 ##sequence-region NZ_JHDO01000027.1 1 4808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000027.1 RefSeq region 1 4808 . + . ID=NZ_JHDO01000027.1:1..4808;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000027.1 RefSeq gene 1 596 . - . ID=gene-AB69_RS22240;Name=AB69_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22240;old_locus_tag=AB69_5023;partial=true;start_range=.,1 NZ_JHDO01000027.1 Protein Homology CDS 1 596 . - 0 ID=cds-WP_000031754.1;Parent=gene-AB69_RS22240;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB69_RS22240;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;start_range=.,1;transl_table=11 NZ_JHDO01000027.1 RefSeq gene 711 786 . - . ID=gene-AB69_RS22235;Name=AB69_RS22235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22235;old_locus_tag=AB69_5024 NZ_JHDO01000027.1 tRNAscan-SE tRNA 711 786 . - . ID=rna-AB69_RS22235;Parent=gene-AB69_RS22235;anticodon=(pos:complement(751..753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22235;product=tRNA-Thr NZ_JHDO01000027.1 tRNAscan-SE exon 711 786 . - . ID=exon-AB69_RS22235-1;Parent=rna-AB69_RS22235;anticodon=(pos:complement(751..753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22235;product=tRNA-Thr NZ_JHDO01000027.1 RefSeq gene 793 867 . - . ID=gene-AB69_RS22230;Name=AB69_RS22230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22230;old_locus_tag=AB69_5025 NZ_JHDO01000027.1 tRNAscan-SE tRNA 793 867 . - . ID=rna-AB69_RS22230;Parent=gene-AB69_RS22230;anticodon=(pos:complement(832..834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22230;product=tRNA-Gly NZ_JHDO01000027.1 tRNAscan-SE exon 793 867 . - . ID=exon-AB69_RS22230-1;Parent=rna-AB69_RS22230;anticodon=(pos:complement(832..834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22230;product=tRNA-Gly NZ_JHDO01000027.1 RefSeq gene 984 1068 . - . ID=gene-AB69_RS22225;Name=AB69_RS22225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22225;old_locus_tag=AB69_5026 NZ_JHDO01000027.1 tRNAscan-SE tRNA 984 1068 . - . ID=rna-AB69_RS22225;Parent=gene-AB69_RS22225;anticodon=(pos:complement(1032..1034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22225;product=tRNA-Tyr NZ_JHDO01000027.1 tRNAscan-SE exon 984 1068 . - . ID=exon-AB69_RS22225-1;Parent=rna-AB69_RS22225;anticodon=(pos:complement(1032..1034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22225;product=tRNA-Tyr NZ_JHDO01000027.1 RefSeq gene 1077 1152 . - . ID=gene-AB69_RS22220;Name=AB69_RS22220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS22220;old_locus_tag=AB69_5027 NZ_JHDO01000027.1 tRNAscan-SE tRNA 1077 1152 . - . ID=rna-AB69_RS22220;Parent=gene-AB69_RS22220;anticodon=(pos:complement(1117..1119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22220;product=tRNA-Thr NZ_JHDO01000027.1 tRNAscan-SE exon 1077 1152 . - . ID=exon-AB69_RS22220-1;Parent=rna-AB69_RS22220;anticodon=(pos:complement(1117..1119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS22220;product=tRNA-Thr NZ_JHDO01000027.1 RefSeq gene 1514 2464 . + . ID=gene-AB69_RS22215;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AB69_RS22215;old_locus_tag=AB69_5029 NZ_JHDO01000027.1 Protein Homology CDS 1514 2464 . + 0 ID=cds-WP_000023081.1;Parent=gene-AB69_RS22215;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AB69_RS22215;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JHDO01000027.1 RefSeq gene 2493 3458 . - . ID=gene-AB69_RS22210;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AB69_RS22210;old_locus_tag=AB69_5030 NZ_JHDO01000027.1 Protein Homology CDS 2493 3458 . - 0 ID=cds-WP_000654630.1;Parent=gene-AB69_RS22210;Dbxref=GenBank:WP_000654630.1;Name=WP_000654630.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418404.1;locus_tag=AB69_RS22210;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000654630.1;transl_table=11 NZ_JHDO01000027.1 RefSeq gene 3455 4483 . - . ID=gene-AB69_RS22205;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AB69_RS22205;old_locus_tag=AB69_5031 NZ_JHDO01000027.1 Protein Homology CDS 3455 4483 . - 0 ID=cds-WP_032231588.1;Parent=gene-AB69_RS22205;Dbxref=GenBank:WP_032231588.1;Name=WP_032231588.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418403.1;locus_tag=AB69_RS22205;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_032231588.1;transl_table=11 ##sequence-region NZ_JHDO01000028.1 1 3038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000028.1 RefSeq region 1 3038 . + . ID=NZ_JHDO01000028.1:1..3038;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000028.1 RefSeq gene 50 628 . - . ID=gene-AB69_RS22200;Name=AB69_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22200;old_locus_tag=AB69_5032 NZ_JHDO01000028.1 Protein Homology CDS 50 628 . - 0 ID=cds-WP_077698072.1;Parent=gene-AB69_RS22200;Dbxref=GenBank:WP_077698072.1;Name=WP_077698072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001700399.1;locus_tag=AB69_RS22200;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_077698072.1;transl_table=11 NZ_JHDO01000028.1 RefSeq gene 926 1786 . - . ID=gene-AB69_RS22195;Name=AB69_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22195;old_locus_tag=AB69_5033 NZ_JHDO01000028.1 Protein Homology CDS 926 1786 . - 0 ID=cds-WP_032231440.1;Parent=gene-AB69_RS22195;Dbxref=GenBank:WP_032231440.1;Name=WP_032231440.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588735.1;locus_tag=AB69_RS22195;product=helix-turn-helix domain-containing protein;protein_id=WP_032231440.1;transl_table=11 NZ_JHDO01000028.1 RefSeq pseudogene 2224 3038 . + . ID=gene-AB69_RS28270;Name=AB69_RS28270;end_range=3038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28270;partial=true;pseudo=true NZ_JHDO01000028.1 Protein Homology CDS 2224 3038 . + 0 ID=cds-AB69_RS28270;Parent=gene-AB69_RS28270;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3038,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS28270;partial=true;product=IS3-like element IS2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000029.1 1 2748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000029.1 RefSeq region 1 2748 . + . ID=NZ_JHDO01000029.1:1..2748;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000029.1 RefSeq gene 1 550 . - . ID=gene-AB69_RS22185;Name=AB69_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22185;old_locus_tag=AB69_5036;partial=true;start_range=.,1 NZ_JHDO01000029.1 Protein Homology CDS 1 550 . - 0 ID=cds-WP_016247604.1-3;Parent=gene-AB69_RS22185;Dbxref=GenBank:WP_016247604.1;Name=WP_016247604.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS22185;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_016247604.1;start_range=.,1;transl_table=11 NZ_JHDO01000029.1 RefSeq pseudogene 614 952 . + . ID=gene-AB69_RS22180;Name=AB69_RS22180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22180;old_locus_tag=AB69_5037;partial=true;pseudo=true;start_range=.,614 NZ_JHDO01000029.1 Protein Homology CDS 614 952 . + 0 ID=cds-AB69_RS22180;Parent=gene-AB69_RS22180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AB69_RS22180;partial=true;product=recombinase family protein;pseudo=true;start_range=.,614;transl_table=11 NZ_JHDO01000029.1 RefSeq gene 1135 1995 . + . ID=gene-AB69_RS22175;Name=AB69_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22175;old_locus_tag=AB69_5038 NZ_JHDO01000029.1 Protein Homology CDS 1135 1995 . + 0 ID=cds-WP_000027057.1;Parent=gene-AB69_RS22175;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB69_RS22175;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JHDO01000029.1 RefSeq pseudogene 2109 2701 . - . ID=gene-AB69_RS22170;Name=AB69_RS22170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22170;old_locus_tag=AB69_5039;partial=true;pseudo=true;start_range=.,2109 NZ_JHDO01000029.1 Protein Homology CDS 2109 2701 . - 0 ID=cds-AB69_RS22170;Parent=gene-AB69_RS22170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS22170;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,2109;transl_table=11 ##sequence-region NZ_JHDO01000030.1 1 3415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000030.1 RefSeq region 1 3415 . + . ID=NZ_JHDO01000030.1:1..3415;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000030.1 RefSeq gene 31 1193 . - . ID=gene-AB69_RS22165;Name=AB69_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22165;old_locus_tag=AB69_5040 NZ_JHDO01000030.1 Protein Homology CDS 932 1193 . - 0 ID=cds-WP_113706130.1;Parent=gene-AB69_RS22165;Dbxref=GenBank:WP_113706130.1;Name=WP_113706130.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS22165;product=IS3-like element IS3 family transposase;protein_id=WP_113706130.1;transl_table=11 NZ_JHDO01000030.1 Protein Homology CDS 31 932 . - 2 ID=cds-WP_113706130.1;Parent=gene-AB69_RS22165;Dbxref=GenBank:WP_113706130.1;Name=WP_113706130.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS22165;product=IS3-like element IS3 family transposase;protein_id=WP_113706130.1;transl_table=11 NZ_JHDO01000030.1 RefSeq gene 1514 2311 . - . ID=gene-AB69_RS22155;Name=AB69_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22155;old_locus_tag=AB69_5042 NZ_JHDO01000030.1 Protein Homology CDS 1514 2311 . - 0 ID=cds-WP_032231695.1;Parent=gene-AB69_RS22155;Dbxref=GenBank:WP_032231695.1;Name=WP_032231695.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001684615.1;locus_tag=AB69_RS22155;product=helix-turn-helix transcriptional regulator;protein_id=WP_032231695.1;transl_table=11 NZ_JHDO01000030.1 RefSeq pseudogene 2960 3415 . - . ID=gene-AB69_RS0123310;Name=AB69_RS0123310;end_range=3415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123310;partial=true;pseudo=true NZ_JHDO01000030.1 Protein Homology CDS 2960 3415 . - 0 ID=cds-AB69_RS0123310;Parent=gene-AB69_RS0123310;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3415,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS0123310;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000031.1 1 7558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000031.1 RefSeq region 1 7558 . + . ID=NZ_JHDO01000031.1:1..7558;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000031.1 RefSeq gene 1 273 . + . ID=gene-AB69_RS22150;Name=AB69_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22150;old_locus_tag=AB69_5046;partial=true;start_range=.,1 NZ_JHDO01000031.1 Protein Homology CDS 1 273 . + 0 ID=cds-WP_032235639.1;Parent=gene-AB69_RS22150;Dbxref=GenBank:WP_032235639.1;Name=WP_032235639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=AB69_RS22150;partial=true;product=plasmid partitioning/stability family protein;protein_id=WP_032235639.1;start_range=.,1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 297 587 . + . ID=gene-AB69_RS28280;Name=AB69_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28280 NZ_JHDO01000031.1 Protein Homology CDS 297 587 . + 0 ID=cds-WP_113706131.1;Parent=gene-AB69_RS28280;Dbxref=GenBank:WP_113706131.1;Name=WP_113706131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AB69_RS28280;product=hypothetical protein;protein_id=WP_113706131.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 697 1599 . + . ID=gene-AB69_RS22145;Name=AB69_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22145;old_locus_tag=AB69_5048 NZ_JHDO01000031.1 Protein Homology CDS 697 1599 . + 0 ID=cds-WP_001438601.1;Parent=gene-AB69_RS22145;Dbxref=GenBank:WP_001438601.1;Name=WP_001438601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AB69_RS22145;product=DUF1281 domain-containing protein;protein_id=WP_001438601.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 1596 1838 . + . ID=gene-AB69_RS30130;Name=AB69_RS30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30130;old_locus_tag=AB69_5049 NZ_JHDO01000031.1 Protein Homology CDS 1596 1838 . + 0 ID=cds-WP_001503439.1;Parent=gene-AB69_RS30130;Dbxref=GenBank:WP_001503439.1;Name=WP_001503439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697961.1;locus_tag=AB69_RS30130;product=hypothetical protein;protein_id=WP_001503439.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 1936 2952 . + . ID=gene-AB69_RS22140;Name=AB69_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22140;old_locus_tag=AB69_5050 NZ_JHDO01000031.1 Protein Homology CDS 1936 2952 . + 0 ID=cds-WP_000219394.1;Parent=gene-AB69_RS22140;Dbxref=GenBank:WP_000219394.1;Name=WP_000219394.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219394.1;locus_tag=AB69_RS22140;product=IS110-like element ISShdy1 family transposase;protein_id=WP_000219394.1;transl_table=11 NZ_JHDO01000031.1 RefSeq pseudogene 3499 3573 . + . ID=gene-AB69_RS30135;Name=AB69_RS30135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30135;partial=true;pseudo=true;start_range=.,3499 NZ_JHDO01000031.1 Protein Homology CDS 3499 3573 . + 0 ID=cds-AB69_RS30135;Parent=gene-AB69_RS30135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052644.1;locus_tag=AB69_RS30135;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3499;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 3649 4332 . + . ID=gene-AB69_RS22135;Name=AB69_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22135;old_locus_tag=AB69_5053 NZ_JHDO01000031.1 Protein Homology CDS 3649 4332 . + 0 ID=cds-WP_000086125.1;Parent=gene-AB69_RS22135;Dbxref=GenBank:WP_000086125.1;Name=WP_000086125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=AB69_RS22135;product=DNA methylase;protein_id=WP_000086125.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 4333 4554 . + . ID=gene-AB69_RS22130;Name=AB69_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22130;old_locus_tag=AB69_5054 NZ_JHDO01000031.1 Protein Homology CDS 4333 4554 . + 0 ID=cds-WP_001104871.1;Parent=gene-AB69_RS22130;Dbxref=GenBank:WP_001104871.1;Name=WP_001104871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AB69_RS22130;product=hypothetical protein;protein_id=WP_001104871.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 4448 5002 . + . ID=gene-AB69_RS22125;Name=AB69_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22125;old_locus_tag=AB69_5055 NZ_JHDO01000031.1 Protein Homology CDS 4448 5002 . + 0 ID=cds-WP_126130113.1;Parent=gene-AB69_RS22125;Dbxref=GenBank:WP_126130113.1;Name=WP_126130113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AB69_RS22125;product=DUF1380 family protein;protein_id=WP_126130113.1;transl_table=11 NZ_JHDO01000031.1 RefSeq pseudogene 5047 5822 . + . ID=gene-AB69_RS0123320;Name=AB69_RS0123320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123320;old_locus_tag=AB69_5056;pseudo=true NZ_JHDO01000031.1 Protein Homology CDS 5047 5822 . + 0 ID=cds-AB69_RS0123320;Parent=gene-AB69_RS0123320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AB69_RS0123320;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 6237 6662 . + . ID=gene-AB69_RS22120;Name=AB69_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22120;old_locus_tag=AB69_5057 NZ_JHDO01000031.1 Protein Homology CDS 6237 6662 . + 0 ID=cds-WP_001198882.1;Parent=gene-AB69_RS22120;Dbxref=GenBank:WP_001198882.1;Name=WP_001198882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AB69_RS22120;product=antirestriction protein;protein_id=WP_001198882.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 6709 7131 . + . ID=gene-AB69_RS22115;Name=AB69_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22115;old_locus_tag=AB69_5058 NZ_JHDO01000031.1 Protein Homology CDS 6709 7131 . + 0 ID=cds-WP_000271739.1;Parent=gene-AB69_RS22115;Dbxref=GenBank:WP_000271739.1;Name=WP_000271739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AB69_RS22115;product=DUF1380 family protein;protein_id=WP_000271739.1;transl_table=11 NZ_JHDO01000031.1 RefSeq gene 7128 7319 . + . ID=gene-AB69_RS22110;Name=AB69_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22110;old_locus_tag=AB69_5059 NZ_JHDO01000031.1 Protein Homology CDS 7128 7319 . + 0 ID=cds-WP_001024838.1;Parent=gene-AB69_RS22110;Dbxref=GenBank:WP_001024838.1;Name=WP_001024838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AB69_RS22110;product=hypothetical protein;protein_id=WP_001024838.1;transl_table=11 ##sequence-region NZ_JHDO01000032.1 1 2127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000032.1 RefSeq region 1 2127 . + . ID=NZ_JHDO01000032.1:1..2127;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000032.1 RefSeq gene 1 859 . + . ID=gene-AB69_RS22105;Name=AB69_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22105;old_locus_tag=AB69_5061;partial=true;start_range=.,1 NZ_JHDO01000032.1 Protein Homology CDS 1 859 . + 1 ID=cds-WP_032235642.1;Parent=gene-AB69_RS22105;Dbxref=GenBank:WP_032235642.1;Name=WP_032235642.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB69_RS22105;partial=true;product=IS3-like element IS600 family transposase;protein_id=WP_032235642.1;start_range=.,1;transl_table=11 NZ_JHDO01000032.1 RefSeq gene 903 2015 . + . ID=gene-AB69_RS22100;Name=AB69_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22100;old_locus_tag=AB69_5062 NZ_JHDO01000032.1 Protein Homology CDS 903 2015 . + 0 ID=cds-WP_001300563.1;Parent=gene-AB69_RS22100;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS22100;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDO01000033.1 1 1589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000033.1 RefSeq region 1 1589 . + . ID=NZ_JHDO01000033.1:1..1589;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000033.1 RefSeq gene 1 1116 . - . ID=gene-AB69_RS22095;Name=AB69_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22095;old_locus_tag=AB69_5063;partial=true;start_range=.,1 NZ_JHDO01000033.1 Protein Homology CDS 867 1116 . - 0 ID=cds-WP_112031860.1;Parent=gene-AB69_RS22095;Dbxref=GenBank:WP_112031860.1;Name=WP_112031860.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB69_RS22095;partial=true;product=IS3-like element IS600 family transposase;protein_id=WP_112031860.1;transl_table=11 NZ_JHDO01000033.1 Protein Homology CDS 1 867 . - 2 ID=cds-WP_112031860.1;Parent=gene-AB69_RS22095;Dbxref=GenBank:WP_112031860.1;Name=WP_112031860.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB69_RS22095;partial=true;product=IS3-like element IS600 family transposase;protein_id=WP_112031860.1;start_range=.,1;transl_table=11 NZ_JHDO01000033.1 RefSeq pseudogene 1183 1589 . + . ID=gene-AB69_RS0123325;Name=AB69_RS0123325;end_range=1589,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123325;old_locus_tag=AB69_5065;partial=true;pseudo=true;start_range=.,1183 NZ_JHDO01000033.1 Protein Homology CDS 1183 1589 . + 0 ID=cds-AB69_RS0123325;Parent=gene-AB69_RS0123325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=1589,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AB69_RS0123325;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1183;transl_table=11 ##sequence-region NZ_JHDO01000034.1 1 2447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000034.1 RefSeq region 1 2447 . + . ID=NZ_JHDO01000034.1:1..2447;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000034.1 RefSeq gene 258 515 . + . ID=gene-AB69_RS22085;Name=AB69_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22085;old_locus_tag=AB69_5066 NZ_JHDO01000034.1 Protein Homology CDS 258 515 . + 0 ID=cds-WP_032231641.1;Parent=gene-AB69_RS22085;Dbxref=GenBank:WP_032231641.1;Name=WP_032231641.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083834.1;locus_tag=AB69_RS22085;product=replication regulatory protein RepA;protein_id=WP_032231641.1;transl_table=11 NZ_JHDO01000034.1 RefSeq gene 749 823 . + . ID=gene-AB69_RS30515;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB69_RS30515 NZ_JHDO01000034.1 Protein Homology CDS 749 823 . + 0 ID=cds-WP_001375168.1;Parent=gene-AB69_RS30515;Dbxref=GenBank:WP_001375168.1;Name=WP_001375168.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001375168.1;locus_tag=AB69_RS30515;product=RepA leader peptide Tap;protein_id=WP_001375168.1;transl_table=11 NZ_JHDO01000034.1 RefSeq gene 816 1673 . + . ID=gene-AB69_RS22080;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB69_RS22080;old_locus_tag=AB69_5067 NZ_JHDO01000034.1 Protein Homology CDS 816 1673 . + 0 ID=cds-WP_032231642.1;Parent=gene-AB69_RS22080;Dbxref=GenBank:WP_032231642.1;Name=WP_032231642.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB69_RS22080;product=incFII family plasmid replication initiator RepA;protein_id=WP_032231642.1;transl_table=11 ##sequence-region NZ_JHDO01000035.1 1 632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000035.1 RefSeq region 1 632 . + . ID=NZ_JHDO01000035.1:1..632;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000035.1 RefSeq gene 1 632 . - . ID=gene-AB69_RS0123330;Name=AB69_RS0123330;end_range=632,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0123330;partial=true;start_range=.,1 NZ_JHDO01000035.1 cmsearch rRNA 1 632 . - . ID=rna-AB69_RS0123330;Parent=gene-AB69_RS0123330;Dbxref=RFAM:RF00177;end_range=632,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0123330;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000035.1 cmsearch exon 1 632 . - . ID=exon-AB69_RS0123330-1;Parent=rna-AB69_RS0123330;Dbxref=RFAM:RF00177;end_range=632,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0123330;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JHDO01000036.1 1 3330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000036.1 RefSeq region 1 3330 . + . ID=NZ_JHDO01000036.1:1..3330;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000036.1 RefSeq gene 1 1166 . + . ID=gene-AB69_RS0123335;Name=AB69_RS0123335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123335;old_locus_tag=AB69_5070;partial=true;start_range=.,1 NZ_JHDO01000036.1 Protein Homology CDS 1 1166 . + 2 ID=cds-WP_032179035.1;Parent=gene-AB69_RS0123335;Dbxref=GenBank:WP_032179035.1;Name=WP_032179035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=AB69_RS0123335;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032179035.1;start_range=.,1;transl_table=11 NZ_JHDO01000036.1 RefSeq gene 1150 1632 . + . ID=gene-AB69_RS30520;Name=AB69_RS30520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30520 NZ_JHDO01000036.1 Protein Homology CDS 1150 1632 . + 0 ID=cds-WP_000939263.1;Parent=gene-AB69_RS30520;Dbxref=GenBank:WP_000939263.1;Name=WP_000939263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415974.1;locus_tag=AB69_RS30520;product=YdcD family protein;protein_id=WP_000939263.1;transl_table=11 NZ_JHDO01000036.1 RefSeq gene 1547 1732 . - . ID=gene-AB69_RS29625;Name=AB69_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29625 NZ_JHDO01000036.1 Protein Homology CDS 1547 1732 . - 0 ID=cds-WP_120795385.1;Parent=gene-AB69_RS29625;Dbxref=GenBank:WP_120795385.1;Name=WP_120795385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518780.1;locus_tag=AB69_RS29625;product=protein YncO;protein_id=WP_120795385.1;transl_table=11 NZ_JHDO01000036.1 RefSeq pseudogene 1814 2958 . + . ID=gene-AB69_RS22075;Name=AB69_RS22075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22075;old_locus_tag=AB69_5072;pseudo=true NZ_JHDO01000036.1 Protein Homology CDS 1814 2958 . + 0 ID=cds-AB69_RS22075;Parent=gene-AB69_RS22075;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027427.1;locus_tag=AB69_RS22075;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000036.1 RefSeq gene 3044 3330 . + . ID=gene-AB69_RS22070;Name=AB69_RS22070;end_range=3330,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22070;old_locus_tag=AB69_5074;partial=true NZ_JHDO01000036.1 Protein Homology CDS 3044 3330 . + 0 ID=cds-WP_024174890.1;Parent=gene-AB69_RS22070;Dbxref=GenBank:WP_024174890.1;Name=WP_024174890.1;Ontology_term=GO:0004803;end_range=3330,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AB69_RS22070;partial=true;product=ISAs1 family transposase;protein_id=WP_024174890.1;transl_table=11 ##sequence-region NZ_JHDO01000037.1 1 3812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000037.1 RefSeq region 1 3812 . + . ID=NZ_JHDO01000037.1:1..3812;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000037.1 RefSeq gene 1 280 . + . ID=gene-AB69_RS22065;Name=AB69_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22065;old_locus_tag=AB69_5075;partial=true;start_range=.,1 NZ_JHDO01000037.1 Protein Homology CDS 1 280 . + 1 ID=cds-WP_032235647.1;Parent=gene-AB69_RS22065;Dbxref=GenBank:WP_032235647.1;Name=WP_032235647.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS22065;partial=true;product=IS1 family transposase;protein_id=WP_032235647.1;start_range=.,1;transl_table=11 NZ_JHDO01000037.1 RefSeq gene 317 505 . + . ID=gene-AB69_RS0123345;Name=AB69_RS0123345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123345 NZ_JHDO01000037.1 Protein Homology CDS 317 505 . + 0 ID=cds-WP_032231435.1;Parent=gene-AB69_RS0123345;Dbxref=GenBank:WP_032231435.1;Name=WP_032231435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312821.1;locus_tag=AB69_RS0123345;product=hypothetical protein;protein_id=WP_032231435.1;transl_table=11 NZ_JHDO01000037.1 RefSeq gene 626 1366 . + . ID=gene-AB69_RS22060;Name=AB69_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22060;old_locus_tag=AB69_5076 NZ_JHDO01000037.1 Protein Homology CDS 626 1366 . + 0 ID=cds-WP_032231434.1;Parent=gene-AB69_RS22060;Dbxref=GenBank:WP_032231434.1;Name=WP_032231434.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=AB69_RS22060;product=tyrosine-type recombinase/integrase;protein_id=WP_032231434.1;transl_table=11 NZ_JHDO01000037.1 RefSeq gene 1645 2622 . - . ID=gene-AB69_RS22055;Name=AB69_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22055;old_locus_tag=AB69_5078 NZ_JHDO01000037.1 Protein Homology CDS 1645 2622 . - 0 ID=cds-WP_000361612.1;Parent=gene-AB69_RS22055;Dbxref=GenBank:WP_000361612.1;Name=WP_000361612.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=AB69_RS22055;product=RepB family plasmid replication initiator protein;protein_id=WP_000361612.1;transl_table=11 NZ_JHDO01000037.1 RefSeq gene 3707 3812 . + . ID=gene-AB69_RS26110;Name=AB69_RS26110;end_range=3812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26110;partial=true NZ_JHDO01000037.1 Protein Homology CDS 3707 3812 . + 0 ID=cds-WP_001625827.1;Parent=gene-AB69_RS26110;Dbxref=GenBank:WP_001625827.1;Name=WP_001625827.1;Ontology_term=GO:0006313;end_range=3812,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS26110;partial=true;product=insertion element IS1 2 protein insA;protein_id=WP_001625827.1;transl_table=11 ##sequence-region NZ_JHDO01000038.1 1 4041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000038.1 RefSeq region 1 4041 . + . ID=NZ_JHDO01000038.1:1..4041;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000038.1 RefSeq gene 1 330 . + . ID=gene-AB69_RS0123360;Name=AB69_RS0123360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123360;partial=true;start_range=.,1 NZ_JHDO01000038.1 Protein Homology CDS 1 330 . + 0 ID=cds-WP_024184777.1;Parent=gene-AB69_RS0123360;Dbxref=GenBank:WP_024184777.1;Name=WP_024184777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=AB69_RS0123360;partial=true;product=IS110 family transposase;protein_id=WP_024184777.1;start_range=.,1;transl_table=11 NZ_JHDO01000038.1 RefSeq pseudogene 810 1007 . - . ID=gene-AB69_RS22050;Name=AB69_RS22050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS22050;old_locus_tag=AB69_5081;partial=true;pseudo=true;start_range=.,810 NZ_JHDO01000038.1 Protein Homology CDS 810 1007 . - 0 ID=cds-AB69_RS22050;Parent=gene-AB69_RS22050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052678.1;locus_tag=AB69_RS22050;partial=true;product=hypothetical protein;pseudo=true;start_range=.,810;transl_table=11 NZ_JHDO01000038.1 RefSeq gene 1023 1418 . - . ID=gene-AB69_RS22045;Name=AB69_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22045;old_locus_tag=AB69_5082 NZ_JHDO01000038.1 Protein Homology CDS 1023 1418 . - 0 ID=cds-WP_001398513.1;Parent=gene-AB69_RS22045;Dbxref=GenBank:WP_001398513.1;Name=WP_001398513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398513.1;locus_tag=AB69_RS22045;product=hypothetical protein;protein_id=WP_001398513.1;transl_table=11 NZ_JHDO01000038.1 RefSeq gene 1459 1665 . - . ID=gene-AB69_RS22040;Name=AB69_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22040;old_locus_tag=AB69_5083 NZ_JHDO01000038.1 Protein Homology CDS 1459 1665 . - 0 ID=cds-WP_000561970.1;Parent=gene-AB69_RS22040;Dbxref=GenBank:WP_000561970.1;Name=WP_000561970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000561970.1;locus_tag=AB69_RS22040;product=hypothetical protein;protein_id=WP_000561970.1;transl_table=11 NZ_JHDO01000038.1 RefSeq gene 1856 2686 . - . ID=gene-AB69_RS22035;Name=AB69_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22035;old_locus_tag=AB69_5084 NZ_JHDO01000038.1 Protein Homology CDS 1856 2686 . - 0 ID=cds-WP_001398512.1;Parent=gene-AB69_RS22035;Dbxref=GenBank:WP_001398512.1;Name=WP_001398512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398512.1;locus_tag=AB69_RS22035;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_001398512.1;transl_table=11 NZ_JHDO01000038.1 RefSeq gene 2699 3133 . - . ID=gene-AB69_RS22030;Name=AB69_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22030;old_locus_tag=AB69_5085 NZ_JHDO01000038.1 Protein Homology CDS 2699 3133 . - 0 ID=cds-WP_001398511.1;Parent=gene-AB69_RS22030;Dbxref=GenBank:WP_001398511.1;Name=WP_001398511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398511.1;locus_tag=AB69_RS22030;product=hypothetical protein;protein_id=WP_001398511.1;transl_table=11 NZ_JHDO01000038.1 RefSeq pseudogene 3203 3468 . - . ID=gene-AB69_RS29930;Name=AB69_RS29930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29930;pseudo=true NZ_JHDO01000038.1 Protein Homology CDS 3203 3468 . - 0 ID=cds-AB69_RS29930;Parent=gene-AB69_RS29930;Note=frameshifted;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969979.1;locus_tag=AB69_RS29930;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JHDO01000038.1 RefSeq gene 3712 4041 . - . ID=gene-AB69_RS0123365;Name=AB69_RS0123365;end_range=4041,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123365;partial=true NZ_JHDO01000038.1 Protein Homology CDS 3712 4041 . - 0 ID=cds-WP_024184777.1-2;Parent=gene-AB69_RS0123365;Dbxref=GenBank:WP_024184777.1;Name=WP_024184777.1;end_range=4041,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=AB69_RS0123365;partial=true;product=IS110 family transposase;protein_id=WP_024184777.1;transl_table=11 ##sequence-region NZ_JHDO01000039.1 1 945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000039.1 RefSeq region 1 945 . + . ID=NZ_JHDO01000039.1:1..945;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000039.1 RefSeq pseudogene 1 330 . + . ID=gene-AB69_RS22025;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=pseudogene;locus_tag=AB69_RS22025;old_locus_tag=AB69_5088;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000039.1 Protein Homology CDS 1 330 . + 0 ID=cds-AB69_RS22025;Parent=gene-AB69_RS22025;Note=catalyzes the O-acetylation of serine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AB69_RS22025;partial=true;product=serine O-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000039.1 RefSeq gene 383 856 . - . ID=gene-AB69_RS22020;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AB69_RS22020;old_locus_tag=AB69_5089 NZ_JHDO01000039.1 Protein Homology CDS 383 856 . - 0 ID=cds-WP_000932347.1;Parent=gene-AB69_RS22020;Dbxref=GenBank:WP_000932347.1;Name=WP_000932347.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418063.1;locus_tag=AB69_RS22020;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932347.1;transl_table=11 ##sequence-region NZ_JHDO01000040.1 1 5406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000040.1 RefSeq region 1 5406 . + . ID=NZ_JHDO01000040.1:1..5406;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000040.1 RefSeq gene 43 1194 . + . ID=gene-AB69_RS22015;Name=AB69_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22015;old_locus_tag=AB69_5090 NZ_JHDO01000040.1 Protein Homology CDS 43 1194 . + 0 ID=cds-WP_001254932.1;Parent=gene-AB69_RS22015;Dbxref=GenBank:WP_001254932.1;Name=WP_001254932.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AB69_RS22015;product=IS30-like element IS30 family transposase;protein_id=WP_001254932.1;transl_table=11 NZ_JHDO01000040.1 RefSeq pseudogene 1204 2109 . + . ID=gene-AB69_RS29140;Name=AB69_RS29140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29140;old_locus_tag=AB69_5091;partial=true;pseudo=true;start_range=.,1204 NZ_JHDO01000040.1 Protein Homology CDS 1204 2109 . + 0 ID=cds-AB69_RS29140;Parent=gene-AB69_RS29140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AB69_RS29140;partial=true;product=IS3-like element IS911 family transposase;pseudo=true;start_range=.,1204;transl_table=11 NZ_JHDO01000040.1 RefSeq pseudogene 2119 2304 . - . ID=gene-AB69_RS29145;Name=AB69_RS29145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29145;partial=true;pseudo=true;start_range=.,2119 NZ_JHDO01000040.1 Protein Homology CDS 2119 2304 . - 0 ID=cds-AB69_RS29145;Parent=gene-AB69_RS29145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AB69_RS29145;partial=true;product=DUF2254 domain-containing protein;pseudo=true;start_range=.,2119;transl_table=11 NZ_JHDO01000040.1 RefSeq gene 2367 4364 . - . ID=gene-AB69_RS22005;Name=AB69_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22005;old_locus_tag=AB69_5092 NZ_JHDO01000040.1 Protein Homology CDS 2367 4364 . - 0 ID=cds-WP_001293436.1;Parent=gene-AB69_RS22005;Dbxref=GenBank:WP_001293436.1;Name=WP_001293436.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AB69_RS22005;product=BCCT family transporter;protein_id=WP_001293436.1;transl_table=11 NZ_JHDO01000040.1 RefSeq gene 4518 5406 . - . ID=gene-AB69_RS22000;Name=AB69_RS22000;end_range=5406,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS22000;old_locus_tag=AB69_5093;partial=true NZ_JHDO01000040.1 Protein Homology CDS 4518 5406 . - 1 ID=cds-WP_000385505.1;Parent=gene-AB69_RS22000;Dbxref=GenBank:WP_000385505.1;Name=WP_000385505.1;Ontology_term=GO:0006313,GO:0004803;end_range=5406,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB69_RS22000;partial=true;product=IS3-like element IS600 family transposase;protein_id=WP_000385505.1;transl_table=11 ##sequence-region NZ_JHDO01000041.1 1 2646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000041.1 RefSeq region 1 2646 . + . ID=NZ_JHDO01000041.1:1..2646;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000041.1 RefSeq gene 1 1549 . - . ID=gene-AB69_RS21995;Name=AB69_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21995;old_locus_tag=AB69_5094;partial=true;start_range=.,1 NZ_JHDO01000041.1 Protein Homology CDS 1 1549 . - 0 ID=cds-WP_032231638.1;Parent=gene-AB69_RS21995;Dbxref=GenBank:WP_032231638.1;Name=WP_032231638.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB69_RS21995;partial=true;product=IS66-like element ISCro1 family transposase;protein_id=WP_032231638.1;start_range=.,1;transl_table=11 NZ_JHDO01000041.1 RefSeq gene 1569 1916 . - . ID=gene-AB69_RS21990;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB69_RS21990;old_locus_tag=AB69_5095 NZ_JHDO01000041.1 Protein Homology CDS 1569 1916 . - 0 ID=cds-WP_000624622.1-2;Parent=gene-AB69_RS21990;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB69_RS21990;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JHDO01000041.1 RefSeq gene 1916 2593 . - . ID=gene-AB69_RS21985;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB69_RS21985;old_locus_tag=AB69_5096 NZ_JHDO01000041.1 Protein Homology CDS 1916 2593 . - 0 ID=cds-WP_001339397.1-3;Parent=gene-AB69_RS21985;Dbxref=GenBank:WP_001339397.1;Name=WP_001339397.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AB69_RS21985;product=IS66-like element accessory protein TnpA;protein_id=WP_001339397.1;transl_table=11 ##sequence-region NZ_JHDO01000042.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000042.1 RefSeq region 1 2047 . + . ID=NZ_JHDO01000042.1:1..2047;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000042.1 RefSeq gene 1 789 . - . ID=gene-AB69_RS21980;Name=AB69_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21980;old_locus_tag=AB69_5097;partial=true;start_range=.,1 NZ_JHDO01000042.1 Protein Homology CDS 1 789 . - 0 ID=cds-WP_021554688.1;Parent=gene-AB69_RS21980;Dbxref=GenBank:WP_021554688.1;Name=WP_021554688.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB69_RS21980;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=WP_021554688.1;start_range=.,1;transl_table=11 NZ_JHDO01000042.1 RefSeq gene 1264 2047 . - . ID=gene-AB69_RS21975;Name=argE;end_range=2047,.;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AB69_RS21975;old_locus_tag=AB69_5098;partial=true NZ_JHDO01000042.1 Protein Homology CDS 1264 2047 . - 1 ID=cds-WP_032181191.1;Parent=gene-AB69_RS21975;Dbxref=GenBank:WP_032181191.1;Name=WP_032181191.1;Ontology_term=GO:0006526,GO:0019213;end_range=2047,.;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AB69_RS21975;partial=true;product=acetylornithine deacetylase;protein_id=WP_032181191.1;transl_table=11 ##sequence-region NZ_JHDO01000043.1 1 3044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000043.1 RefSeq region 1 3044 . + . ID=NZ_JHDO01000043.1:1..3044;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000043.1 RefSeq gene 1 550 . - . ID=gene-AB69_RS21970;Name=AB69_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21970;old_locus_tag=AB69_5099;partial=true;start_range=.,1 NZ_JHDO01000043.1 Protein Homology CDS 1 550 . - 0 ID=cds-WP_016247604.1-4;Parent=gene-AB69_RS21970;Dbxref=GenBank:WP_016247604.1;Name=WP_016247604.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS21970;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_016247604.1;start_range=.,1;transl_table=11 NZ_JHDO01000043.1 RefSeq pseudogene 604 954 . + . ID=gene-AB69_RS26140;Name=AB69_RS26140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26140;old_locus_tag=AB69_5100;partial=true;pseudo=true;start_range=.,604 NZ_JHDO01000043.1 Protein Homology CDS 604 954 . + 0 ID=cds-AB69_RS26140;Parent=gene-AB69_RS26140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=AB69_RS26140;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,604;transl_table=11 NZ_JHDO01000043.1 RefSeq gene 1197 2060 . - . ID=gene-AB69_RS21965;Name=AB69_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21965;old_locus_tag=AB69_5101 NZ_JHDO01000043.1 Protein Homology CDS 1197 2060 . - 0 ID=cds-WP_032231266.1;Parent=gene-AB69_RS21965;Dbxref=GenBank:WP_032231266.1;Name=WP_032231266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803592.1;locus_tag=AB69_RS21965;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_032231266.1;transl_table=11 NZ_JHDO01000043.1 RefSeq gene 2077 2502 . - . ID=gene-AB69_RS0123375;Name=AB69_RS0123375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123375 NZ_JHDO01000043.1 Protein Homology CDS 2077 2502 . - 0 ID=cds-WP_024198578.1;Parent=gene-AB69_RS0123375;Dbxref=GenBank:WP_024198578.1;Name=WP_024198578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061207.1;locus_tag=AB69_RS0123375;product=hypothetical protein;protein_id=WP_024198578.1;transl_table=11 NZ_JHDO01000043.1 RefSeq gene 2596 2823 . - . ID=gene-AB69_RS30680;Name=AB69_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30680 NZ_JHDO01000043.1 Protein Homology CDS 2596 2823 . - 0 ID=cds-WP_306308578.1;Parent=gene-AB69_RS30680;Dbxref=GenBank:WP_306308578.1;Name=WP_306308578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340350.1;locus_tag=AB69_RS30680;product=hypothetical protein;protein_id=WP_306308578.1;transl_table=11 NZ_JHDO01000043.1 RefSeq pseudogene 2891 3044 . - . ID=gene-AB69_RS29155;Name=AB69_RS29155;end_range=3044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29155;old_locus_tag=AB69_5102;partial=true;pseudo=true NZ_JHDO01000043.1 Protein Homology CDS 2891 3044 . - 1 ID=cds-AB69_RS29155;Parent=gene-AB69_RS29155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS29155;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000044.1 1 1488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000044.1 RefSeq region 1 1488 . + . ID=NZ_JHDO01000044.1:1..1488;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000044.1 RefSeq pseudogene 1 257 . - . ID=gene-AB69_RS21955;Name=AB69_RS21955;end_range=257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS21955;old_locus_tag=AB69_5103;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000044.1 Protein Homology CDS 1 257 . - 0 ID=cds-AB69_RS21955;Parent=gene-AB69_RS21955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=257,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS21955;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000044.1 RefSeq pseudogene 289 1451 . - . ID=gene-AB69_RS26150;Name=AB69_RS26150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26150;pseudo=true NZ_JHDO01000044.1 Protein Homology CDS 289 1451 . - 0 ID=cds-AB69_RS26150;Parent=gene-AB69_RS26150;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS26150;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000045.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000045.1 RefSeq region 1 2047 . + . ID=NZ_JHDO01000045.1:1..2047;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000045.1 RefSeq gene 1 93 . + . ID=gene-AB69_RS26155;Name=AB69_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26155;partial=true;start_range=.,1 NZ_JHDO01000045.1 Protein Homology CDS 1 93 . + 0 ID=cds-WP_148731133.1;Parent=gene-AB69_RS26155;Dbxref=GenBank:WP_148731133.1;Name=WP_148731133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AB69_RS26155;partial=true;product=hypothetical protein;protein_id=WP_148731133.1;start_range=.,1;transl_table=11 NZ_JHDO01000045.1 RefSeq gene 147 230 . - . ID=gene-AB69_RS21940;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB69_RS21940;old_locus_tag=AB69_5107 NZ_JHDO01000045.1 Protein Homology CDS 147 230 . - 0 ID=cds-WP_001295215.1;Parent=gene-AB69_RS21940;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AB69_RS21940;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JHDO01000045.1 RefSeq gene 970 1323 . + . ID=gene-AB69_RS21935;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB69_RS21935;old_locus_tag=AB69_5109 NZ_JHDO01000045.1 Protein Homology CDS 970 1323 . + 0 ID=cds-WP_000008957.1;Parent=gene-AB69_RS21935;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB69_RS21935;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JHDO01000045.1 RefSeq pseudogene 1377 2047 . + . ID=gene-AB69_RS21930;Name=arsB;end_range=2047,.;gbkey=Gene;gene=arsB;gene_biotype=pseudogene;locus_tag=AB69_RS21930;old_locus_tag=AB69_5110;partial=true;pseudo=true NZ_JHDO01000045.1 Protein Homology CDS 1377 2047 . + 0 ID=cds-AB69_RS21930;Parent=gene-AB69_RS21930;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB69_RS21930;partial=true;product=arsenite/antimonite:H(+) antiporter ArsB;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000046.1 1 822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000046.1 RefSeq region 1 822 . + . ID=NZ_JHDO01000046.1:1..822;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000046.1 RefSeq pseudogene 1 775 . + . ID=gene-AB69_RS21925;Name=AB69_RS21925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS21925;old_locus_tag=AB69_5111;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000046.1 Protein Homology CDS 1 775 . + 1 ID=cds-AB69_RS21925;Parent=gene-AB69_RS21925;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418222.1;locus_tag=AB69_RS21925;partial=true;product=ketol-acid reductoisomerase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDO01000047.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000047.1 RefSeq region 1 2047 . + . ID=NZ_JHDO01000047.1:1..2047;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000047.1 RefSeq gene 1 419 . - . ID=gene-AB69_RS21920;Name=AB69_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21920;old_locus_tag=AB69_5112;partial=true;start_range=.,1 NZ_JHDO01000047.1 Protein Homology CDS 1 419 . - 0 ID=cds-WP_032183758.1;Parent=gene-AB69_RS21920;Dbxref=GenBank:WP_032183758.1;Name=WP_032183758.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AB69_RS21920;partial=true;product=PmbA/TldA family metallopeptidase;protein_id=WP_032183758.1;start_range=.,1;transl_table=11 NZ_JHDO01000047.1 RefSeq gene 758 2047 . - . ID=gene-AB69_RS21915;Name=AB69_RS21915;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21915;old_locus_tag=AB69_5113;partial=true NZ_JHDO01000047.1 Protein Homology CDS 758 2047 . - 0 ID=cds-WP_032183760.1;Parent=gene-AB69_RS21915;Dbxref=GenBank:WP_032183760.1;Name=WP_032183760.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AB69_RS21915;partial=true;product=AsmA-like C-terminal region-containing protein;protein_id=WP_032183760.1;transl_table=11 ##sequence-region NZ_JHDO01000048.1 1 204793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000048.1 RefSeq region 1 204793 . + . ID=NZ_JHDO01000048.1:1..204793;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000048.1 RefSeq pseudogene 1 553 . - . ID=gene-AB69_RS28310;Name=AB69_RS28310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28310;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000048.1 Protein Homology CDS 1 553 . - 0 ID=cds-AB69_RS28310;Parent=gene-AB69_RS28310;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28310;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 860 1123 . - . ID=gene-AB69_RS0123385;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AB69_RS0123385;old_locus_tag=AB69_0002 NZ_JHDO01000048.1 Protein Homology CDS 860 1123 . - 0 ID=cds-WP_001274021.1;Parent=gene-AB69_RS0123385;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AB69_RS0123385;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 1226 1444 . + . ID=gene-AB69_RS0123390;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AB69_RS0123390 NZ_JHDO01000048.1 Protein Homology CDS 1226 1444 . + 0 ID=cds-WP_001300728.1;Parent=gene-AB69_RS0123390;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AB69_RS0123390;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 1452 2393 . + . ID=gene-AB69_RS21905;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AB69_RS21905;old_locus_tag=AB69_0003 NZ_JHDO01000048.1 Protein Homology CDS 1452 2393 . + 0 ID=cds-WP_000767329.1;Parent=gene-AB69_RS21905;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AB69_RS21905;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 2436 5252 . + . ID=gene-AB69_RS21900;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AB69_RS21900;old_locus_tag=AB69_0004 NZ_JHDO01000048.1 Protein Homology CDS 2436 5252 . + 0 ID=cds-WP_001286857.1;Parent=gene-AB69_RS21900;Dbxref=GenBank:WP_001286857.1;Name=WP_001286857.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AB69_RS21900;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 5252 5746 . + . ID=gene-AB69_RS21895;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AB69_RS21895;old_locus_tag=AB69_0005 NZ_JHDO01000048.1 Protein Homology CDS 5252 5746 . + 0 ID=cds-WP_000083372.1;Parent=gene-AB69_RS21895;Dbxref=GenBank:WP_000083372.1;Name=WP_000083372.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AB69_RS21895;product=signal peptidase II;protein_id=WP_000083372.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 5871 6320 . + . ID=gene-AB69_RS21890;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AB69_RS21890;old_locus_tag=AB69_0006 NZ_JHDO01000048.1 Protein Homology CDS 5871 6320 . + 0 ID=cds-WP_000004655.1;Parent=gene-AB69_RS21890;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AB69_RS21890;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 6322 7272 . + . ID=gene-AB69_RS21885;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AB69_RS21885;old_locus_tag=AB69_0007 NZ_JHDO01000048.1 Protein Homology CDS 6322 7272 . + 0 ID=cds-WP_001166395.1;Parent=gene-AB69_RS21885;Dbxref=GenBank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AB69_RS21885;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 7338 8252 . + . ID=gene-AB69_RS21880;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AB69_RS21880;old_locus_tag=AB69_0008 NZ_JHDO01000048.1 Protein Homology CDS 7338 8252 . + 0 ID=cds-WP_001239142.1;Parent=gene-AB69_RS21880;Dbxref=GenBank:WP_001239142.1;Name=WP_001239142.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AB69_RS21880;product=ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 8419 9240 . + . ID=gene-AB69_RS21875;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AB69_RS21875;old_locus_tag=AB69_0009 NZ_JHDO01000048.1 Protein Homology CDS 8419 9240 . + 0 ID=cds-WP_000543604.1;Parent=gene-AB69_RS21875;Dbxref=GenBank:WP_000543604.1;Name=WP_000543604.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AB69_RS21875;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 9696 10844 . + . ID=gene-AB69_RS21870;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AB69_RS21870;old_locus_tag=AB69_0011 NZ_JHDO01000048.1 Protein Homology CDS 9696 10844 . + 0 ID=cds-WP_000597260.1;Parent=gene-AB69_RS21870;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AB69_RS21870;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 10862 14083 . + . ID=gene-AB69_RS21865;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AB69_RS21865;old_locus_tag=AB69_0012 NZ_JHDO01000048.1 Protein Homology CDS 10862 14083 . + 0 ID=cds-WP_001126348.1;Parent=gene-AB69_RS21865;Dbxref=GenBank:WP_001126348.1;Name=WP_001126348.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414574.1;locus_tag=AB69_RS21865;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126348.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 14345 14740 . + . ID=gene-AB69_RS21855;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AB69_RS21855;old_locus_tag=AB69_0014 NZ_JHDO01000048.1 Protein Homology CDS 14345 14740 . + 0 ID=cds-WP_000333125.1;Parent=gene-AB69_RS21855;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AB69_RS21855;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 14826 15416 . - . ID=gene-AB69_RS21850;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AB69_RS21850;old_locus_tag=AB69_0015 NZ_JHDO01000048.1 Protein Homology CDS 14826 15416 . - 0 ID=cds-WP_000122871.1;Parent=gene-AB69_RS21850;Dbxref=GenBank:WP_000122871.1;Name=WP_000122871.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414577.2;locus_tag=AB69_RS21850;product=carnitine operon protein CaiE;protein_id=WP_000122871.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 15422 16207 . - . ID=gene-AB69_RS21845;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AB69_RS21845;old_locus_tag=AB69_0016 NZ_JHDO01000048.1 Protein Homology CDS 15422 16207 . - 0 ID=cds-WP_032230751.1;Parent=gene-AB69_RS21845;Dbxref=GenBank:WP_032230751.1;Name=WP_032230751.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AB69_RS21845;product=crotonobetainyl-CoA hydratase;protein_id=WP_032230751.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 16316 17869 . - . ID=gene-AB69_RS21840;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AB69_RS21840;old_locus_tag=AB69_0017 NZ_JHDO01000048.1 Protein Homology CDS 16316 17869 . - 0 ID=cds-WP_001338228.1;Parent=gene-AB69_RS21840;Dbxref=GenBank:WP_001338228.1;Name=WP_001338228.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414579.4;locus_tag=AB69_RS21840;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001338228.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 17943 19160 . - . ID=gene-AB69_RS21835;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AB69_RS21835;old_locus_tag=AB69_0018 NZ_JHDO01000048.1 Protein Homology CDS 17943 19160 . - 0 ID=cds-WP_000349936.1;Parent=gene-AB69_RS21835;Dbxref=GenBank:WP_000349936.1;Name=WP_000349936.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414580.1;locus_tag=AB69_RS21835;product=L-carnitine CoA-transferase;protein_id=WP_000349936.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 19289 20431 . - . ID=gene-AB69_RS21830;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AB69_RS21830;old_locus_tag=AB69_0019 NZ_JHDO01000048.1 Protein Homology CDS 19289 20431 . - 0 ID=cds-WP_000347117.1;Parent=gene-AB69_RS21830;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AB69_RS21830;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 20462 21976 . - . ID=gene-AB69_RS21825;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AB69_RS21825;old_locus_tag=AB69_0020 NZ_JHDO01000048.1 Protein Homology CDS 20462 21976 . - 0 ID=cds-WP_000787103.1;Parent=gene-AB69_RS21825;Dbxref=GenBank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AB69_RS21825;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 22448 23218 . + . ID=gene-AB69_RS21820;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AB69_RS21820;old_locus_tag=AB69_0021 NZ_JHDO01000048.1 Protein Homology CDS 22448 23218 . + 0 ID=cds-WP_000692204.1;Parent=gene-AB69_RS21820;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AB69_RS21820;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JHDO01000048.1 RefSeq pseudogene 23233 24173 . + . ID=gene-AB69_RS0123405;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=pseudogene;locus_tag=AB69_RS0123405;old_locus_tag=AB69_0022;pseudo=true NZ_JHDO01000048.1 Protein Homology CDS 23233 24173 . + 0 ID=cds-AB69_RS0123405;Parent=gene-AB69_RS0123405;Note=frameshifted;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AB69_RS0123405;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 24224 25510 . + . ID=gene-AB69_RS21815;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AB69_RS21815;old_locus_tag=AB69_0023 NZ_JHDO01000048.1 Protein Homology CDS 24224 25510 . + 0 ID=cds-WP_001287715.1;Parent=gene-AB69_RS21815;Dbxref=GenBank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AB69_RS21815;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 25507 25794 . + . ID=gene-AB69_RS21810;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AB69_RS21810;old_locus_tag=AB69_0024 NZ_JHDO01000048.1 Protein Homology CDS 25507 25794 . + 0 ID=cds-WP_000203741.1;Parent=gene-AB69_RS21810;Dbxref=GenBank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AB69_RS21810;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 25852 27183 . + . ID=gene-AB69_RS21805;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=AB69_RS21805;old_locus_tag=AB69_0025 NZ_JHDO01000048.1 Protein Homology CDS 25852 27183 . + 0 ID=cds-WP_001183198.1;Parent=gene-AB69_RS21805;Dbxref=GenBank:WP_001183198.1;Name=WP_001183198.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AB69_RS21805;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 27291 27821 . + . ID=gene-AB69_RS21800;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AB69_RS21800;old_locus_tag=AB69_0026 NZ_JHDO01000048.1 Protein Homology CDS 27291 27821 . + 0 ID=cds-WP_032230754.1;Parent=gene-AB69_RS21800;Dbxref=GenBank:WP_032230754.1;Name=WP_032230754.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706002.1;locus_tag=AB69_RS21800;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_032230754.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 27814 29676 . + . ID=gene-AB69_RS21795;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AB69_RS21795;old_locus_tag=AB69_0027 NZ_JHDO01000048.1 Protein Homology CDS 27814 29676 . + 0 ID=cds-WP_000377129.1;Parent=gene-AB69_RS21795;Dbxref=GenBank:WP_000377129.1;Name=WP_000377129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AB69_RS21795;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377129.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 29868 30347 . + . ID=gene-AB69_RS21790;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AB69_RS21790;old_locus_tag=AB69_0028 NZ_JHDO01000048.1 Protein Homology CDS 29868 30347 . + 0 ID=cds-WP_000624375.1;Parent=gene-AB69_RS21790;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AB69_RS21790;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 30425 31267 . - . ID=gene-AB69_RS21785;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AB69_RS21785;old_locus_tag=AB69_0029 NZ_JHDO01000048.1 Protein Homology CDS 30425 31267 . - 0 ID=cds-WP_000257192.1;Parent=gene-AB69_RS21785;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AB69_RS21785;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 31274 31651 . - . ID=gene-AB69_RS0123410;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AB69_RS0123410;old_locus_tag=AB69_0030 NZ_JHDO01000048.1 Protein Homology CDS 31274 31651 . - 0 ID=cds-WP_000610901.1;Parent=gene-AB69_RS0123410;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AB69_RS0123410;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 31654 32475 . - . ID=gene-AB69_RS21780;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AB69_RS21780;old_locus_tag=AB69_0031 NZ_JHDO01000048.1 Protein Homology CDS 31654 32475 . - 0 ID=cds-WP_001065381.1;Parent=gene-AB69_RS21780;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AB69_RS21780;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 32472 33461 . - . ID=gene-AB69_RS21775;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AB69_RS21775;old_locus_tag=AB69_0032 NZ_JHDO01000048.1 Protein Homology CDS 32472 33461 . - 0 ID=cds-WP_001467900.1;Parent=gene-AB69_RS21775;Dbxref=GenBank:WP_001467900.1;Name=WP_001467900.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414594.1;locus_tag=AB69_RS21775;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_001467900.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 33461 34747 . - . ID=gene-AB69_RS21770;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AB69_RS21770;old_locus_tag=AB69_0033 NZ_JHDO01000048.1 Protein Homology CDS 33461 34747 . - 0 ID=cds-WP_000800457.1;Parent=gene-AB69_RS21770;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AB69_RS21770;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 34800 37154 . - . ID=gene-AB69_RS21765;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AB69_RS21765;old_locus_tag=AB69_0034 NZ_JHDO01000048.1 Protein Homology CDS 34800 37154 . - 0 ID=cds-WP_000746151.1;Parent=gene-AB69_RS21765;Dbxref=GenBank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AB69_RS21765;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 37409 38224 . + . ID=gene-AB69_RS21760;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AB69_RS21760;old_locus_tag=AB69_0035 NZ_JHDO01000048.1 Protein Homology CDS 37409 38224 . + 0 ID=cds-WP_001200579.1;Parent=gene-AB69_RS21760;Dbxref=GenBank:WP_001200579.1;Name=WP_001200579.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AB69_RS21760;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JHDO01000048.1 RefSeq pseudogene 38519 39200 . + . ID=gene-AB69_RS21755;Name=yabP;gbkey=Gene;gene=yabP;gene_biotype=pseudogene;locus_tag=AB69_RS21755;old_locus_tag=AB69_0036;pseudo=true NZ_JHDO01000048.1 Protein Homology CDS 38519 39200 . + 0 ID=cds-AB69_RS21755;Parent=gene-AB69_RS21755;Note=frameshifted;gbkey=CDS;gene=yabP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518734.1;locus_tag=AB69_RS21755;product=protein YabP;pseudo=true;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 39197 39355 . + . ID=gene-AB69_RS29635;Name=yabQ;gbkey=Gene;gene=yabQ;gene_biotype=protein_coding;locus_tag=AB69_RS29635 NZ_JHDO01000048.1 GeneMarkS-2+ CDS 39197 39355 . + 0 ID=cds-WP_001393554.1;Parent=gene-AB69_RS29635;Dbxref=GenBank:WP_001393554.1;Name=WP_001393554.1;gbkey=CDS;gene=yabQ;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29635;product=protein YabQ;protein_id=WP_001393554.1;transl_table=11 NZ_JHDO01000048.1 RefSeq pseudogene 39372 39550 . - . ID=gene-AB69_RS29160;Name=AB69_RS29160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29160;partial=true;pseudo=true;start_range=.,39372 NZ_JHDO01000048.1 Protein Homology CDS 39372 39550 . - 0 ID=cds-AB69_RS29160;Parent=gene-AB69_RS29160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244358.1;locus_tag=AB69_RS29160;partial=true;product=transposase DNA-binding-containing protein;pseudo=true;start_range=.,39372;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 39763 40422 . - . ID=gene-AB69_RS21750;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AB69_RS21750;old_locus_tag=AB69_0037 NZ_JHDO01000048.1 Protein Homology CDS 39763 40422 . - 0 ID=cds-WP_000525176.1;Parent=gene-AB69_RS21750;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AB69_RS21750;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 40434 43340 . - . ID=gene-AB69_RS21745;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AB69_RS21745;old_locus_tag=AB69_0038 NZ_JHDO01000048.1 Protein Homology CDS 40434 43340 . - 0 ID=cds-WP_001117011.1;Parent=gene-AB69_RS21745;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AB69_RS21745;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 43505 45856 . - . ID=gene-AB69_RS21740;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AB69_RS21740;old_locus_tag=AB69_0039 NZ_JHDO01000048.1 Protein Homology CDS 43505 45856 . - 0 ID=cds-WP_000035672.1;Parent=gene-AB69_RS21740;Dbxref=GenBank:WP_000035672.1;Name=WP_000035672.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=AB69_RS21740;product=DNA polymerase II;protein_id=WP_000035672.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 45931 46626 . - . ID=gene-AB69_RS21735;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB69_RS21735;old_locus_tag=AB69_0040 NZ_JHDO01000048.1 Protein Homology CDS 45931 46626 . - 0 ID=cds-WP_000888666.1;Parent=gene-AB69_RS21735;Dbxref=GenBank:WP_000888666.1;Name=WP_000888666.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AB69_RS21735;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 46911 48413 . - . ID=gene-AB69_RS21730;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AB69_RS21730;old_locus_tag=AB69_0041 NZ_JHDO01000048.1 Protein Homology CDS 46911 48413 . - 0 ID=cds-WP_000151748.1;Parent=gene-AB69_RS21730;Dbxref=GenBank:WP_000151748.1;Name=WP_000151748.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414604.1;locus_tag=AB69_RS21730;product=L-arabinose isomerase;protein_id=WP_000151748.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 48424 50124 . - . ID=gene-AB69_RS21725;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AB69_RS21725;old_locus_tag=AB69_0042 NZ_JHDO01000048.1 Protein Homology CDS 48424 50124 . - 0 ID=cds-WP_000951856.1;Parent=gene-AB69_RS21725;Dbxref=GenBank:WP_000951856.1;Name=WP_000951856.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AB69_RS21725;product=ribulokinase;protein_id=WP_000951856.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 50463 51341 . + . ID=gene-AB69_RS21720;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AB69_RS21720;old_locus_tag=AB69_0043 NZ_JHDO01000048.1 Protein Homology CDS 50463 51341 . + 0 ID=cds-WP_001300811.1;Parent=gene-AB69_RS21720;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AB69_RS21720;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 51427 52191 . + . ID=gene-AB69_RS21715;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AB69_RS21715;old_locus_tag=AB69_0044 NZ_JHDO01000048.1 Protein Homology CDS 51427 52191 . + 0 ID=cds-WP_001148390.1;Parent=gene-AB69_RS21715;Dbxref=GenBank:WP_001148390.1;Name=WP_001148390.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414607.1;locus_tag=AB69_RS21715;product=DedA family protein;protein_id=WP_001148390.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 52305 53003 . - . ID=gene-AB69_RS21710;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AB69_RS21710;old_locus_tag=AB69_0045 NZ_JHDO01000048.1 Protein Homology CDS 52305 53003 . - 0 ID=cds-WP_000916281.1;Parent=gene-AB69_RS21710;Dbxref=GenBank:WP_000916281.1;Name=WP_000916281.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414608.1;locus_tag=AB69_RS21710;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916281.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 52987 54597 . - . ID=gene-AB69_RS21705;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AB69_RS21705;old_locus_tag=AB69_0046 NZ_JHDO01000048.1 Protein Homology CDS 52987 54597 . - 0 ID=cds-WP_000235721.1;Parent=gene-AB69_RS21705;Dbxref=GenBank:WP_000235721.1;Name=WP_000235721.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414609.1;locus_tag=AB69_RS21705;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235721.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 54573 55556 . - . ID=gene-AB69_RS21700;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AB69_RS21700;old_locus_tag=AB69_0047 NZ_JHDO01000048.1 Protein Homology CDS 54573 55556 . - 0 ID=cds-WP_001301364.1;Parent=gene-AB69_RS21700;Dbxref=GenBank:WP_001301364.1;Name=WP_001301364.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AB69_RS21700;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001301364.1;transl_table=11 NZ_JHDO01000048.1 cmsearch riboswitch 55587 55686 . - . ID=id-NZ_JHDO01000048.1:55587..55686;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000048.1 RefSeq gene 55720 57375 . - . ID=gene-AB69_RS21695;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AB69_RS21695;old_locus_tag=AB69_0048 NZ_JHDO01000048.1 Protein Homology CDS 55720 57375 . - 0 ID=cds-WP_001138624.1;Parent=gene-AB69_RS21695;Dbxref=GenBank:WP_001138624.1;Name=WP_001138624.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414611.1;locus_tag=AB69_RS21695;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001138624.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 57464 57595 . + . ID=gene-AB69_RS21690;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AB69_RS21690;old_locus_tag=AB69_0049 NZ_JHDO01000048.1 Protein Homology CDS 57464 57595 . + 0 ID=cds-WP_001248770.1;Parent=gene-AB69_RS21690;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AB69_RS21690;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 57697 58875 . + . ID=gene-AB69_RS21685;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AB69_RS21685;old_locus_tag=AB69_0050 NZ_JHDO01000048.1 Protein Homology CDS 57697 58875 . + 0 ID=cds-WP_000637847.1;Parent=gene-AB69_RS21685;Dbxref=GenBank:WP_000637847.1;Name=WP_000637847.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AB69_RS21685;product=sugar efflux transporter SetA;protein_id=WP_000637847.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 58924 59529 . - . ID=gene-AB69_RS21680;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AB69_RS21680;old_locus_tag=AB69_0051 NZ_JHDO01000048.1 Protein Homology CDS 58924 59529 . - 0 ID=cds-WP_000818228.1;Parent=gene-AB69_RS21680;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AB69_RS21680;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 59540 60940 . - . ID=gene-AB69_RS21675;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AB69_RS21675;old_locus_tag=AB69_0052 NZ_JHDO01000048.1 Protein Homology CDS 59540 60940 . - 0 ID=cds-WP_001140652.1;Parent=gene-AB69_RS21675;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AB69_RS21675;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 60943 62034 . - . ID=gene-AB69_RS21670;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AB69_RS21670;old_locus_tag=AB69_0053 NZ_JHDO01000048.1 Protein Homology CDS 60943 62034 . - 0 ID=cds-WP_000042353.1;Parent=gene-AB69_RS21670;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AB69_RS21670;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 62034 63605 . - . ID=gene-AB69_RS21665;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AB69_RS21665;old_locus_tag=AB69_0054 NZ_JHDO01000048.1 Protein Homology CDS 62034 63605 . - 0 ID=cds-WP_000082850.1;Parent=gene-AB69_RS21665;Dbxref=GenBank:WP_000082850.1;Name=WP_000082850.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AB69_RS21665;product=2-isopropylmalate synthase;protein_id=WP_000082850.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 63698 63784 . - . ID=gene-AB69_RS0123415;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AB69_RS0123415 NZ_JHDO01000048.1 Protein Homology CDS 63698 63784 . - 0 ID=cds-WP_001300467.1;Parent=gene-AB69_RS0123415;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AB69_RS0123415;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 64444 65388 . + . ID=gene-AB69_RS21660;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AB69_RS21660;old_locus_tag=AB69_0056 NZ_JHDO01000048.1 Protein Homology CDS 64444 65388 . + 0 ID=cds-WP_001115472.1;Parent=gene-AB69_RS21660;Dbxref=GenBank:WP_001115472.1;Name=WP_001115472.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AB69_RS21660;product=transcriptional regulator LeuO;protein_id=WP_001115472.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 65543 65587 . - . ID=gene-AB69_RS29640;Name=AB69_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29640 NZ_JHDO01000048.1 Protein Homology CDS 65543 65587 . - 0 ID=cds-WP_120795371.1;Parent=gene-AB69_RS29640;Dbxref=GenBank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AB69_RS29640;product=protein YabR;protein_id=WP_120795371.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 65706 67430 . + . ID=gene-AB69_RS21655;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AB69_RS21655;old_locus_tag=AB69_0057 NZ_JHDO01000048.1 Protein Homology CDS 65706 67430 . + 0 ID=cds-WP_001295534.1;Parent=gene-AB69_RS21655;Dbxref=GenBank:WP_001295534.1;Name=WP_001295534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AB69_RS21655;product=acetolactate synthase 3 large subunit;protein_id=WP_001295534.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 67433 67924 . + . ID=gene-AB69_RS21650;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB69_RS21650;old_locus_tag=AB69_0058 NZ_JHDO01000048.1 Protein Homology CDS 67433 67924 . + 0 ID=cds-WP_001300383.1;Parent=gene-AB69_RS21650;Dbxref=GenBank:WP_001300383.1;Name=WP_001300383.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AB69_RS21650;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 67936 68022 . + . ID=gene-AB69_RS0123420;Name=AB69_RS0123420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123420 NZ_JHDO01000048.1 Protein Homology CDS 67936 68022 . + 0 ID=cds-WP_001303787.1;Parent=gene-AB69_RS0123420;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AB69_RS0123420;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 68104 69108 . + . ID=gene-AB69_RS21645;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AB69_RS21645;old_locus_tag=AB69_0059 NZ_JHDO01000048.1 Protein Homology CDS 68104 69108 . + 0 ID=cds-WP_000762401.1;Parent=gene-AB69_RS21645;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AB69_RS21645;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 69710 70168 . + . ID=gene-AB69_RS21640;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AB69_RS21640;old_locus_tag=AB69_0061 NZ_JHDO01000048.1 Protein Homology CDS 69710 70168 . + 0 ID=cds-WP_001295533.1;Parent=gene-AB69_RS21640;Dbxref=GenBank:WP_001295533.1;Name=WP_001295533.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AB69_RS21640;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295533.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 70170 71111 . + . ID=gene-AB69_RS21635;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AB69_RS21635;old_locus_tag=AB69_0062 NZ_JHDO01000048.1 Protein Homology CDS 70170 71111 . + 0 ID=cds-WP_000970479.1;Parent=gene-AB69_RS21635;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AB69_RS21635;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 71108 71473 . + . ID=gene-AB69_RS21630;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AB69_RS21630;old_locus_tag=AB69_0063 NZ_JHDO01000048.1 Protein Homology CDS 71108 71473 . + 0 ID=cds-WP_000625658.1;Parent=gene-AB69_RS21630;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AB69_RS21630;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 71489 73255 . + . ID=gene-AB69_RS21625;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AB69_RS21625;old_locus_tag=AB69_0064 NZ_JHDO01000048.1 Protein Homology CDS 71489 73255 . + 0 ID=cds-WP_000642196.1;Parent=gene-AB69_RS21625;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AB69_RS21625;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 73242 74729 . + . ID=gene-AB69_RS21620;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AB69_RS21620;old_locus_tag=AB69_0065 NZ_JHDO01000048.1 Protein Homology CDS 73242 74729 . + 0 ID=cds-WP_000785124.1;Parent=gene-AB69_RS21620;Dbxref=GenBank:WP_000785124.1;Name=WP_000785124.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=AB69_RS21620;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000785124.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 74726 76084 . + . ID=gene-AB69_RS21615;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AB69_RS21615;old_locus_tag=AB69_0066 NZ_JHDO01000048.1 Protein Homology CDS 74726 76084 . + 0 ID=cds-WP_032230756.1;Parent=gene-AB69_RS21615;Dbxref=GenBank:WP_032230756.1;Name=WP_032230756.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AB69_RS21615;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_032230756.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 76078 77160 . + . ID=gene-AB69_RS21610;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AB69_RS21610;old_locus_tag=AB69_0067 NZ_JHDO01000048.1 Protein Homology CDS 76078 77160 . + 0 ID=cds-WP_000964131.1;Parent=gene-AB69_RS21610;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AB69_RS21610;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 77163 78479 . + . ID=gene-AB69_RS21605;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AB69_RS21605;old_locus_tag=AB69_0068 NZ_JHDO01000048.1 Protein Homology CDS 77163 78479 . + 0 ID=cds-WP_000796481.1;Parent=gene-AB69_RS21605;Dbxref=GenBank:WP_000796481.1;Name=WP_000796481.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AB69_RS21605;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 78479 79723 . + . ID=gene-AB69_RS21600;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AB69_RS21600;old_locus_tag=AB69_0069 NZ_JHDO01000048.1 Protein Homology CDS 78479 79723 . + 0 ID=cds-WP_001295532.1;Parent=gene-AB69_RS21600;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AB69_RS21600;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 79720 80787 . + . ID=gene-AB69_RS21595;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AB69_RS21595;old_locus_tag=AB69_0070 NZ_JHDO01000048.1 Protein Homology CDS 79720 80787 . + 0 ID=cds-WP_000016560.1;Parent=gene-AB69_RS21595;Dbxref=GenBank:WP_000016560.1;Name=WP_000016560.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AB69_RS21595;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016560.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 80841 82316 . + . ID=gene-AB69_RS21590;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AB69_RS21590;old_locus_tag=AB69_0071 NZ_JHDO01000048.1 Protein Homology CDS 80841 82316 . + 0 ID=cds-WP_001096049.1;Parent=gene-AB69_RS21590;Dbxref=GenBank:WP_001096049.1;Name=WP_001096049.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AB69_RS21590;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096049.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 82309 83229 . + . ID=gene-AB69_RS21585;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AB69_RS21585;old_locus_tag=AB69_0072 NZ_JHDO01000048.1 Protein Homology CDS 82309 83229 . + 0 ID=cds-WP_000130056.1;Parent=gene-AB69_RS21585;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AB69_RS21585;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 83231 84061 . + . ID=gene-AB69_RS21580;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AB69_RS21580;old_locus_tag=AB69_0073 NZ_JHDO01000048.1 Protein Homology CDS 83231 84061 . + 0 ID=cds-WP_000075748.1;Parent=gene-AB69_RS21580;Dbxref=GenBank:WP_000075748.1;Name=WP_000075748.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414635.1;locus_tag=AB69_RS21580;product=cell division protein FtsQ;protein_id=WP_000075748.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 84058 85320 . + . ID=gene-AB69_RS21575;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AB69_RS21575;old_locus_tag=AB69_0074 NZ_JHDO01000048.1 Protein Homology CDS 84058 85320 . + 0 ID=cds-WP_032230757.1;Parent=gene-AB69_RS21575;Dbxref=GenBank:WP_032230757.1;Name=WP_032230757.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AB69_RS21575;product=cell division protein FtsA;protein_id=WP_032230757.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 85381 86532 . + . ID=gene-AB69_RS21570;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AB69_RS21570;old_locus_tag=AB69_0075 NZ_JHDO01000048.1 Protein Homology CDS 85381 86532 . + 0 ID=cds-WP_000462776.1;Parent=gene-AB69_RS21570;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AB69_RS21570;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 86633 87550 . + . ID=gene-AB69_RS21565;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AB69_RS21565;old_locus_tag=AB69_0076 NZ_JHDO01000048.1 Protein Homology CDS 86633 87550 . + 0 ID=cds-WP_000595482.1;Parent=gene-AB69_RS21565;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AB69_RS21565;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 87781 88293 . + . ID=gene-AB69_RS21560;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AB69_RS21560;old_locus_tag=AB69_0077 NZ_JHDO01000048.1 Protein Homology CDS 87781 88293 . + 0 ID=cds-WP_000014321.1;Parent=gene-AB69_RS21560;Dbxref=GenBank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AB69_RS21560;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 88355 91060 . + . ID=gene-AB69_RS21555;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AB69_RS21555;old_locus_tag=AB69_0078 NZ_JHDO01000048.1 Protein Homology CDS 88355 91060 . + 0 ID=cds-WP_000905789.1;Parent=gene-AB69_RS21555;Dbxref=GenBank:WP_000905789.1;Name=WP_000905789.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414640.1;locus_tag=AB69_RS21555;product=preprotein translocase subunit SecA;protein_id=WP_000905789.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 91120 91509 . + . ID=gene-AB69_RS21550;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AB69_RS21550;old_locus_tag=AB69_0079 NZ_JHDO01000048.1 Protein Homology CDS 91120 91509 . + 0 ID=cds-WP_000736007.1;Parent=gene-AB69_RS21550;Dbxref=GenBank:WP_000736007.1;Name=WP_000736007.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AB69_RS21550;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736007.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 91725 91922 . - . ID=gene-AB69_RS21545;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AB69_RS21545;old_locus_tag=AB69_0080 NZ_JHDO01000048.1 Protein Homology CDS 91725 91922 . - 0 ID=cds-WP_000005042.1;Parent=gene-AB69_RS21545;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AB69_RS21545;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 91932 92675 . - . ID=gene-AB69_RS21540;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AB69_RS21540;old_locus_tag=AB69_0081 NZ_JHDO01000048.1 Protein Homology CDS 91932 92675 . - 0 ID=cds-WP_001194734.1;Parent=gene-AB69_RS21540;Dbxref=GenBank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AB69_RS21540;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 92675 93295 . - . ID=gene-AB69_RS21535;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AB69_RS21535;old_locus_tag=AB69_0082 NZ_JHDO01000048.1 Protein Homology CDS 92675 93295 . - 0 ID=cds-WP_001269520.1;Parent=gene-AB69_RS21535;Dbxref=GenBank:WP_001269520.1;Name=WP_001269520.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AB69_RS21535;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 93320 93364 . + . ID=gene-AB69_RS29935;Name=AB69_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29935 NZ_JHDO01000048.1 Protein Homology CDS 93320 93364 . + 0 ID=cds-WP_120795372.1;Parent=gene-AB69_RS29935;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AB69_RS29935;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 93520 94563 . + . ID=gene-AB69_RS21530;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AB69_RS21530;old_locus_tag=AB69_0083 NZ_JHDO01000048.1 Protein Homology CDS 93520 94563 . + 0 ID=cds-WP_001217338.1;Parent=gene-AB69_RS21530;Dbxref=GenBank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AB69_RS21530;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 94598 95800 . - . ID=gene-AB69_RS21525;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AB69_RS21525;old_locus_tag=AB69_0084 NZ_JHDO01000048.1 Protein Homology CDS 94598 95800 . - 0 ID=cds-WP_000157266.1;Parent=gene-AB69_RS21525;Dbxref=GenBank:WP_000157266.1;Name=WP_000157266.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=AB69_RS21525;product=protein transport protein HofC;protein_id=WP_000157266.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 95790 97175 . - . ID=gene-AB69_RS21520;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB69_RS21520;old_locus_tag=AB69_0085 NZ_JHDO01000048.1 Protein Homology CDS 95790 97175 . - 0 ID=cds-WP_001025145.1;Parent=gene-AB69_RS21520;Dbxref=GenBank:WP_001025145.1;Name=WP_001025145.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414649.1;locus_tag=AB69_RS21520;product=type II secretion system protein GspE;protein_id=WP_001025145.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 97185 97625 . - . ID=gene-AB69_RS21515;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AB69_RS21515;old_locus_tag=AB69_0086 NZ_JHDO01000048.1 Protein Homology CDS 97185 97625 . - 0 ID=cds-WP_000360904.1;Parent=gene-AB69_RS21515;Dbxref=GenBank:WP_000360904.1;Name=WP_000360904.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AB69_RS21515;product=prepilin peptidase-dependent pilin;protein_id=WP_000360904.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 97828 98721 . - . ID=gene-AB69_RS21510;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AB69_RS21510;old_locus_tag=AB69_0087 NZ_JHDO01000048.1 Protein Homology CDS 97828 98721 . - 0 ID=cds-WP_001135174.1;Parent=gene-AB69_RS21510;Dbxref=GenBank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AB69_RS21510;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 98809 99360 . + . ID=gene-AB69_RS21505;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AB69_RS21505;old_locus_tag=AB69_0088 NZ_JHDO01000048.1 Protein Homology CDS 98809 99360 . + 0 ID=cds-WP_000923721.1;Parent=gene-AB69_RS21505;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AB69_RS21505;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 99357 100211 . + . ID=gene-AB69_RS21500;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AB69_RS21500;old_locus_tag=AB69_0089 NZ_JHDO01000048.1 Protein Homology CDS 99357 100211 . + 0 ID=cds-WP_000172005.1;Parent=gene-AB69_RS21500;Dbxref=GenBank:WP_000172005.1;Name=WP_000172005.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AB69_RS21500;product=beta-lactamase regulator AmpE;protein_id=WP_000172005.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 100254 101627 . - . ID=gene-AB69_RS21495;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AB69_RS21495;old_locus_tag=AB69_0090 NZ_JHDO01000048.1 Protein Homology CDS 100254 101627 . - 0 ID=cds-WP_000969915.1;Parent=gene-AB69_RS21495;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AB69_RS21495;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 102168 102932 . + . ID=gene-AB69_RS21490;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AB69_RS21490;old_locus_tag=AB69_0091 NZ_JHDO01000048.1 Protein Homology CDS 102168 102932 . + 0 ID=cds-WP_000331776.1;Parent=gene-AB69_RS21490;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AB69_RS21490;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 103093 105756 . + . ID=gene-AB69_RS21485;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AB69_RS21485;old_locus_tag=AB69_0092 NZ_JHDO01000048.1 Protein Homology CDS 103093 105756 . + 0 ID=cds-WP_000003820.1;Parent=gene-AB69_RS21485;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AB69_RS21485;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 105771 107663 . + . ID=gene-AB69_RS21480;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AB69_RS21480;old_locus_tag=AB69_0093 NZ_JHDO01000048.1 Protein Homology CDS 105771 107663 . + 0 ID=cds-WP_000963518.1;Parent=gene-AB69_RS21480;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AB69_RS21480;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 107988 109412 . + . ID=gene-AB69_RS21475;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AB69_RS21475;old_locus_tag=AB69_0094 NZ_JHDO01000048.1 Protein Homology CDS 107988 109412 . + 0 ID=cds-WP_000102485.1;Parent=gene-AB69_RS21475;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AB69_RS21475;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 109483 111336 . - . ID=gene-AB69_RS21470;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AB69_RS21470;old_locus_tag=AB69_0095 NZ_JHDO01000048.1 Protein Homology CDS 109483 111336 . - 0 ID=cds-WP_032230759.1;Parent=gene-AB69_RS21470;Dbxref=GenBank:WP_032230759.1;Name=WP_032230759.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414659.1;locus_tag=AB69_RS21470;product=DUF3300 domain-containing protein;protein_id=WP_032230759.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 111691 114288 . + . ID=gene-AB69_RS21465;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AB69_RS21465;old_locus_tag=AB69_0096 NZ_JHDO01000048.1 Protein Homology CDS 111691 114288 . + 0 ID=cds-WP_001307570.1;Parent=gene-AB69_RS21465;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AB69_RS21465;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 114464 114826 . + . ID=gene-AB69_RS21460;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AB69_RS21460;old_locus_tag=AB69_0097 NZ_JHDO01000048.1 Protein Homology CDS 114464 114826 . + 0 ID=cds-WP_000384306.1;Parent=gene-AB69_RS21460;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AB69_RS21460;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 114864 115658 . - . ID=gene-AB69_RS21455;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AB69_RS21455;old_locus_tag=AB69_0098 NZ_JHDO01000048.1 Protein Homology CDS 114864 115658 . - 0 ID=cds-WP_000734287.1;Parent=gene-AB69_RS21455;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AB69_RS21455;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 115674 116540 . - . ID=gene-AB69_RS21450;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AB69_RS21450;old_locus_tag=AB69_0099 NZ_JHDO01000048.1 Protein Homology CDS 115674 116540 . - 0 ID=cds-WP_000818411.1;Parent=gene-AB69_RS21450;Dbxref=GenBank:WP_000818411.1;Name=WP_000818411.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AB69_RS21450;product=polyamine aminopropyltransferase;protein_id=WP_000818411.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 116646 116993 . - . ID=gene-AB69_RS21445;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AB69_RS21445;old_locus_tag=AB69_0100 NZ_JHDO01000048.1 Protein Homology CDS 116646 116993 . - 0 ID=cds-WP_001295568.1;Parent=gene-AB69_RS21445;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AB69_RS21445;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 117159 118709 . + . ID=gene-AB69_RS21440;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AB69_RS21440;old_locus_tag=AB69_0101 NZ_JHDO01000048.1 Protein Homology CDS 117159 118709 . + 0 ID=cds-WP_001189647.1;Parent=gene-AB69_RS21440;Dbxref=GenBank:WP_001189647.1;Name=WP_001189647.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AB69_RS21440;product=multicopper oxidase CueO;protein_id=WP_001189647.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 118911 121301 . - . ID=gene-AB69_RS21435;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AB69_RS21435;old_locus_tag=AB69_0102 NZ_JHDO01000048.1 Protein Homology CDS 118911 121301 . - 0 ID=cds-WP_032230761.1;Parent=gene-AB69_RS21435;Dbxref=GenBank:WP_032230761.1;Name=WP_032230761.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AB69_RS21435;product=quinoprotein glucose dehydrogenase;protein_id=WP_032230761.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 121507 122043 . + . ID=gene-AB69_RS21430;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AB69_RS21430;old_locus_tag=AB69_0103 NZ_JHDO01000048.1 Protein Homology CDS 121507 122043 . + 0 ID=cds-WP_000683335.1;Parent=gene-AB69_RS21430;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AB69_RS21430;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 122084 122746 . - . ID=gene-AB69_RS21425;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AB69_RS21425;old_locus_tag=AB69_0104 NZ_JHDO01000048.1 Protein Homology CDS 122084 122746 . - 0 ID=cds-WP_000651599.1;Parent=gene-AB69_RS21425;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AB69_RS21425;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 122855 123781 . + . ID=gene-AB69_RS21420;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AB69_RS21420;old_locus_tag=AB69_0105 NZ_JHDO01000048.1 Protein Homology CDS 122855 123781 . + 0 ID=cds-WP_000150637.1;Parent=gene-AB69_RS21420;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AB69_RS21420;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 123778 124548 . + . ID=gene-AB69_RS21415;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AB69_RS21415;old_locus_tag=AB69_0106 NZ_JHDO01000048.1 Protein Homology CDS 123778 124548 . + 0 ID=cds-WP_000972203.1;Parent=gene-AB69_RS21415;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AB69_RS21415;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 124653 125093 . + . ID=gene-AB69_RS21410;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AB69_RS21410;old_locus_tag=AB69_0107 NZ_JHDO01000048.1 Protein Homology CDS 124653 125093 . + 0 ID=cds-WP_000901987.1;Parent=gene-AB69_RS21410;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AB69_RS21410;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 125157 126386 . + . ID=gene-AB69_RS21405;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AB69_RS21405;old_locus_tag=AB69_0108 NZ_JHDO01000048.1 Protein Homology CDS 125157 126386 . + 0 ID=cds-WP_000277917.1;Parent=gene-AB69_RS21405;Dbxref=GenBank:WP_000277917.1;Name=WP_000277917.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AB69_RS21405;product=polysaccharide deacetylase family protein;protein_id=WP_000277917.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 126390 126770 . - . ID=gene-AB69_RS21400;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AB69_RS21400;old_locus_tag=AB69_0109 NZ_JHDO01000048.1 Protein Homology CDS 126390 126770 . - 0 ID=cds-WP_000621515.1;Parent=gene-AB69_RS21400;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AB69_RS21400;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 127044 127946 . + . ID=gene-AB69_RS21395;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AB69_RS21395;old_locus_tag=AB69_0111 NZ_JHDO01000048.1 Protein Homology CDS 127044 127946 . + 0 ID=cds-WP_000339954.1;Parent=gene-AB69_RS21395;Dbxref=GenBank:WP_000339954.1;Name=WP_000339954.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AB69_RS21395;product=recombination-promoting nuclease RpnC;protein_id=WP_000339954.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 128020 128871 . - . ID=gene-AB69_RS21390;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AB69_RS21390;old_locus_tag=AB69_0112 NZ_JHDO01000048.1 Protein Homology CDS 128020 128871 . - 0 ID=cds-WP_000905383.1;Parent=gene-AB69_RS21390;Dbxref=GenBank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AB69_RS21390;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 128883 129677 . - . ID=gene-AB69_RS21385;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AB69_RS21385;old_locus_tag=AB69_0113 NZ_JHDO01000048.1 Protein Homology CDS 128883 129677 . - 0 ID=cds-WP_000805497.1;Parent=gene-AB69_RS21385;Dbxref=GenBank:WP_000805497.1;Name=WP_000805497.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AB69_RS21385;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 129791 131041 . - . ID=gene-AB69_RS21380;Name=yadC;gbkey=Gene;gene=yadC;gene_biotype=protein_coding;locus_tag=AB69_RS21380;old_locus_tag=AB69_0114 NZ_JHDO01000048.1 Protein Homology CDS 129791 131041 . - 0 ID=cds-WP_284729375.1;Parent=gene-AB69_RS21380;Dbxref=GenBank:WP_284729375.1;Name=WP_284729375.1;gbkey=CDS;gene=yadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AB69_RS21380;product=fimbrial tip-adhesin YadC;protein_id=WP_284729375.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 131079 131675 . - . ID=gene-AB69_RS21375;Name=yadK;gbkey=Gene;gene=yadK;gene_biotype=protein_coding;locus_tag=AB69_RS21375;old_locus_tag=AB69_0115 NZ_JHDO01000048.1 Protein Homology CDS 131079 131675 . - 0 ID=cds-WP_000553749.1;Parent=gene-AB69_RS21375;Dbxref=GenBank:WP_000553749.1;Name=WP_000553749.1;gbkey=CDS;gene=yadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AB69_RS21375;product=fimbrial-like protein;protein_id=WP_000553749.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 131702 132307 . - . ID=gene-AB69_RS21370;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AB69_RS21370;old_locus_tag=AB69_0116 NZ_JHDO01000048.1 Protein Homology CDS 131702 132307 . - 0 ID=cds-WP_001310526.1;Parent=gene-AB69_RS21370;Dbxref=GenBank:WP_001310526.1;Name=WP_001310526.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414679.1;locus_tag=AB69_RS21370;product=fimbrial-like protein YadL;protein_id=WP_001310526.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 132319 132888 . - . ID=gene-AB69_RS0123435;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;locus_tag=AB69_RS0123435;old_locus_tag=AB69_0117 NZ_JHDO01000048.1 Protein Homology CDS 132319 132888 . - 0 ID=cds-WP_000598300.1;Parent=gene-AB69_RS0123435;Dbxref=GenBank:WP_000598300.1;Name=WP_000598300.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadM;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AB69_RS0123435;product=fimbrial protein;protein_id=WP_000598300.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 132905 135502 . - . ID=gene-AB69_RS21365;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AB69_RS21365;old_locus_tag=AB69_0119 NZ_JHDO01000048.1 Protein Homology CDS 132905 135502 . - 0 ID=cds-WP_000151606.1;Parent=gene-AB69_RS21365;Dbxref=GenBank:WP_000151606.1;Name=WP_000151606.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AB69_RS21365;product=Yad fimbria usher protein HtrE;protein_id=WP_000151606.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 135537 136277 . - . ID=gene-AB69_RS21360;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;locus_tag=AB69_RS21360;old_locus_tag=AB69_0120 NZ_JHDO01000048.1 Protein Homology CDS 135537 136277 . - 0 ID=cds-WP_000465928.1;Parent=gene-AB69_RS21360;Dbxref=GenBank:WP_000465928.1;Name=WP_000465928.1;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AB69_RS21360;product=fimbrial chaperone;protein_id=WP_000465928.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 136375 136959 . - . ID=gene-AB69_RS21355;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AB69_RS21355;old_locus_tag=AB69_0121 NZ_JHDO01000048.1 Protein Homology CDS 136375 136959 . - 0 ID=cds-WP_000038438.1;Parent=gene-AB69_RS21355;Dbxref=GenBank:WP_000038438.1;Name=WP_000038438.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AB69_RS21355;product=fimbrial protein;protein_id=WP_000038438.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 137329 137808 . - . ID=gene-AB69_RS21350;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AB69_RS21350;old_locus_tag=AB69_0122 NZ_JHDO01000048.1 Protein Homology CDS 137329 137808 . - 0 ID=cds-WP_000215139.1;Parent=gene-AB69_RS21350;Dbxref=GenBank:WP_000215139.1;Name=WP_000215139.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414684.1;locus_tag=AB69_RS21350;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215139.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 137805 139202 . - . ID=gene-AB69_RS21345;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AB69_RS21345;old_locus_tag=AB69_0123 NZ_JHDO01000048.1 Protein Homology CDS 137805 139202 . - 0 ID=cds-WP_010723084.1;Parent=gene-AB69_RS21345;Dbxref=GenBank:WP_010723084.1;Name=WP_010723084.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AB69_RS21345;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_010723084.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 139262 140158 . - . ID=gene-AB69_RS21340;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AB69_RS21340;old_locus_tag=AB69_0124 NZ_JHDO01000048.1 Protein Homology CDS 139262 140158 . - 0 ID=cds-WP_000132715.1;Parent=gene-AB69_RS21340;Dbxref=GenBank:WP_000132715.1;Name=WP_000132715.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AB69_RS21340;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132715.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 140225 140680 . - . ID=gene-AB69_RS21335;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AB69_RS21335;old_locus_tag=AB69_0125 NZ_JHDO01000048.1 Protein Homology CDS 140225 140680 . - 0 ID=cds-WP_001155227.1;Parent=gene-AB69_RS21335;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AB69_RS21335;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 140858 141562 . - . ID=gene-AB69_RS21330;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AB69_RS21330;old_locus_tag=AB69_0126 NZ_JHDO01000048.1 Protein Homology CDS 140858 141562 . - 0 ID=cds-WP_000396036.1;Parent=gene-AB69_RS21330;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AB69_RS21330;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 141577 142107 . - . ID=gene-AB69_RS21325;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AB69_RS21325;old_locus_tag=AB69_0127 NZ_JHDO01000048.1 Protein Homology CDS 141577 142107 . - 0 ID=cds-WP_001294700.1;Parent=gene-AB69_RS21325;Dbxref=GenBank:WP_001294700.1;Name=WP_001294700.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AB69_RS21325;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 142181 144610 . + . ID=gene-AB69_RS21320;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AB69_RS21320;old_locus_tag=AB69_0128 NZ_JHDO01000048.1 Protein Homology CDS 142181 144610 . + 0 ID=cds-WP_001360098.1;Parent=gene-AB69_RS21320;Dbxref=GenBank:WP_001360098.1;Name=WP_001360098.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AB69_RS21320;product=ATP-dependent helicase HrpB;protein_id=WP_001360098.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 144806 147340 . + . ID=gene-AB69_RS21315;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AB69_RS21315;old_locus_tag=AB69_0129 NZ_JHDO01000048.1 Protein Homology CDS 144806 147340 . + 0 ID=cds-WP_000918162.1;Parent=gene-AB69_RS21315;Dbxref=GenBank:WP_000918162.1;Name=WP_000918162.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414691.1;locus_tag=AB69_RS21315;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918162.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 147560 149803 . + . ID=gene-AB69_RS21310;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AB69_RS21310;old_locus_tag=AB69_0131 NZ_JHDO01000048.1 Protein Homology CDS 147560 149803 . + 0 ID=cds-WP_000124438.1;Parent=gene-AB69_RS21310;Dbxref=GenBank:WP_000124438.1;Name=WP_000124438.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AB69_RS21310;product=ferrichrome porin FhuA;protein_id=WP_000124438.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 149854 150651 . + . ID=gene-AB69_RS21305;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AB69_RS21305;old_locus_tag=AB69_0132 NZ_JHDO01000048.1 Protein Homology CDS 149854 150651 . + 0 ID=cds-WP_001158931.1;Parent=gene-AB69_RS21305;Dbxref=GenBank:WP_001158931.1;Name=WP_001158931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AB69_RS21305;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 150651 151541 . + . ID=gene-AB69_RS21300;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AB69_RS21300;old_locus_tag=AB69_0133 NZ_JHDO01000048.1 Protein Homology CDS 150651 151541 . + 0 ID=cds-WP_032230777.1;Parent=gene-AB69_RS21300;Dbxref=GenBank:WP_032230777.1;Name=WP_032230777.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AB69_RS21300;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_032230777.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 151538 153520 . + . ID=gene-AB69_RS21295;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AB69_RS21295;old_locus_tag=AB69_0134 NZ_JHDO01000048.1 Protein Homology CDS 151538 153520 . + 0 ID=cds-WP_000044054.1;Parent=gene-AB69_RS21295;Dbxref=GenBank:WP_000044054.1;Name=WP_000044054.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AB69_RS21295;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_000044054.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 153678 154958 . - . ID=gene-AB69_RS21290;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AB69_RS21290;old_locus_tag=AB69_0135 NZ_JHDO01000048.1 Protein Homology CDS 153678 154958 . - 0 ID=cds-WP_000045305.1;Parent=gene-AB69_RS21290;Dbxref=GenBank:WP_000045305.1;Name=WP_000045305.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AB69_RS21290;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045305.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 155124 155171 . + . ID=gene-AB69_RS30155;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AB69_RS30155 NZ_JHDO01000048.1 Protein Homology CDS 155124 155171 . + 0 ID=cds-WP_211180485.1;Parent=gene-AB69_RS30155;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AB69_RS30155;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 155183 156604 . + . ID=gene-AB69_RS21285;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AB69_RS21285;old_locus_tag=AB69_0136 NZ_JHDO01000048.1 Protein Homology CDS 155183 156604 . + 0 ID=cds-WP_000845394.1;Parent=gene-AB69_RS21285;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AB69_RS21285;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 156628 156693 . + . ID=gene-AB69_RS29645;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AB69_RS29645 NZ_JHDO01000048.1 Protein Homology CDS 156628 156693 . + 0 ID=cds-WP_120795373.1;Parent=gene-AB69_RS29645;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AB69_RS29645;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 156686 157030 . + . ID=gene-AB69_RS21280;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AB69_RS21280;old_locus_tag=AB69_0137 NZ_JHDO01000048.1 Protein Homology CDS 156686 157030 . + 0 ID=cds-WP_001295564.1;Parent=gene-AB69_RS21280;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AB69_RS21280;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 157077 157700 . - . ID=gene-AB69_RS21275;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AB69_RS21275;old_locus_tag=AB69_0138 NZ_JHDO01000048.1 Protein Homology CDS 157077 157700 . - 0 ID=cds-WP_000964221.1;Parent=gene-AB69_RS21275;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AB69_RS21275;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 157738 158538 . - . ID=gene-AB69_RS21270;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AB69_RS21270;old_locus_tag=AB69_0139 NZ_JHDO01000048.1 Protein Homology CDS 157738 158538 . - 0 ID=cds-WP_001129927.1;Parent=gene-AB69_RS21270;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AB69_RS21270;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 158531 159229 . - . ID=gene-AB69_RS21265;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AB69_RS21265;old_locus_tag=AB69_0140 NZ_JHDO01000048.1 Protein Homology CDS 158531 159229 . - 0 ID=cds-WP_000689844.1;Parent=gene-AB69_RS21265;Dbxref=GenBank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AB69_RS21265;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 159313 160830 . + . ID=gene-AB69_RS21260;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AB69_RS21260;old_locus_tag=AB69_0141 NZ_JHDO01000048.1 Protein Homology CDS 159313 160830 . + 0 ID=cds-WP_000057067.1;Parent=gene-AB69_RS21260;Dbxref=GenBank:WP_000057067.1;Name=WP_000057067.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AB69_RS21260;product=dGTPase;protein_id=WP_000057067.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 160960 162384 . + . ID=gene-AB69_RS21255;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AB69_RS21255;old_locus_tag=AB69_0142 NZ_JHDO01000048.1 Protein Homology CDS 160960 162384 . + 0 ID=cds-WP_000753946.1;Parent=gene-AB69_RS21255;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AB69_RS21255;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 162539 163696 . + . ID=gene-AB69_RS21250;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AB69_RS21250;old_locus_tag=AB69_0143 NZ_JHDO01000048.1 Protein Homology CDS 162539 163696 . + 0 ID=cds-WP_032230778.1;Parent=gene-AB69_RS21250;Dbxref=GenBank:WP_032230778.1;Name=WP_032230778.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414704.4;locus_tag=AB69_RS21250;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_032230778.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 163785 164171 . - . ID=gene-AB69_RS21245;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AB69_RS21245;old_locus_tag=AB69_0144 NZ_JHDO01000048.1 Protein Homology CDS 163785 164171 . - 0 ID=cds-WP_000272188.1;Parent=gene-AB69_RS21245;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AB69_RS21245;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 164333 165145 . - . ID=gene-AB69_RS21240;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AB69_RS21240;old_locus_tag=AB69_0145 NZ_JHDO01000048.1 Protein Homology CDS 164333 165145 . - 0 ID=cds-WP_000625631.1;Parent=gene-AB69_RS21240;Dbxref=GenBank:WP_000625631.1;Name=WP_000625631.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AB69_RS21240;product=phosphodiesterase YaeI;protein_id=WP_000625631.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 165199 166023 . - . ID=gene-AB69_RS21235;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AB69_RS21235;old_locus_tag=AB69_0146 NZ_JHDO01000048.1 Protein Homology CDS 165199 166023 . - 0 ID=cds-WP_001186650.1;Parent=gene-AB69_RS21235;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AB69_RS21235;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 166054 168726 . - . ID=gene-AB69_RS21230;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AB69_RS21230;old_locus_tag=AB69_0147 NZ_JHDO01000048.1 Protein Homology CDS 166054 168726 . - 0 ID=cds-WP_001094586.1;Parent=gene-AB69_RS21230;Dbxref=GenBank:WP_001094586.1;Name=WP_001094586.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414709.1;locus_tag=AB69_RS21230;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094586.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 168788 169582 . - . ID=gene-AB69_RS21225;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AB69_RS21225;old_locus_tag=AB69_0148 NZ_JHDO01000048.1 Protein Homology CDS 168788 169582 . - 0 ID=cds-WP_001018194.1;Parent=gene-AB69_RS21225;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AB69_RS21225;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 169950 170675 . + . ID=gene-AB69_RS21220;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AB69_RS21220;old_locus_tag=AB69_0149 NZ_JHDO01000048.1 Protein Homology CDS 169950 170675 . + 0 ID=cds-WP_000246882.1;Parent=gene-AB69_RS21220;Dbxref=GenBank:WP_000246882.1;Name=WP_000246882.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AB69_RS21220;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 170933 171784 . + . ID=gene-AB69_RS21215;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AB69_RS21215;old_locus_tag=AB69_0151 NZ_JHDO01000048.1 Protein Homology CDS 170933 171784 . + 0 ID=cds-WP_000818114.1;Parent=gene-AB69_RS21215;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AB69_RS21215;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 171931 172656 . + . ID=gene-AB69_RS21210;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AB69_RS21210;old_locus_tag=AB69_0152 NZ_JHDO01000048.1 Protein Homology CDS 171931 172656 . + 0 ID=cds-WP_000224573.1;Parent=gene-AB69_RS21210;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AB69_RS21210;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 172948 173505 . + . ID=gene-AB69_RS21205;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AB69_RS21205;old_locus_tag=AB69_0153 NZ_JHDO01000048.1 Protein Homology CDS 172948 173505 . + 0 ID=cds-WP_000622418.1;Parent=gene-AB69_RS21205;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AB69_RS21205;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 173597 174793 . + . ID=gene-AB69_RS21200;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AB69_RS21200;old_locus_tag=AB69_0154 NZ_JHDO01000048.1 Protein Homology CDS 173597 174793 . + 0 ID=cds-WP_000811923.1;Parent=gene-AB69_RS21200;Dbxref=GenBank:WP_000811923.1;Name=WP_000811923.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AB69_RS21200;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 174982 175740 . + . ID=gene-AB69_RS21195;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AB69_RS21195;old_locus_tag=AB69_0155 NZ_JHDO01000048.1 Protein Homology CDS 174982 175740 . + 0 ID=cds-WP_001295562.1;Parent=gene-AB69_RS21195;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AB69_RS21195;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 175753 176610 . + . ID=gene-AB69_RS21190;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AB69_RS21190;old_locus_tag=AB69_0157 NZ_JHDO01000048.1 Protein Homology CDS 175753 176610 . + 0 ID=cds-WP_000922446.1;Parent=gene-AB69_RS21190;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AB69_RS21190;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 176622 177974 . + . ID=gene-AB69_RS21185;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AB69_RS21185;old_locus_tag=AB69_0158 NZ_JHDO01000048.1 Protein Homology CDS 176622 177974 . + 0 ID=cds-WP_001295561.1;Parent=gene-AB69_RS21185;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AB69_RS21185;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 178004 180436 . + . ID=gene-AB69_RS21180;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AB69_RS21180;old_locus_tag=AB69_0159 NZ_JHDO01000048.1 Protein Homology CDS 178004 180436 . + 0 ID=cds-WP_001240896.1;Parent=gene-AB69_RS21180;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AB69_RS21180;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 180558 181043 . + . ID=gene-AB69_RS21175;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AB69_RS21175;old_locus_tag=AB69_0160 NZ_JHDO01000048.1 Protein Homology CDS 180558 181043 . + 0 ID=cds-WP_000758956.1;Parent=gene-AB69_RS21175;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AB69_RS21175;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 181047 182072 . + . ID=gene-AB69_RS21170;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AB69_RS21170;old_locus_tag=AB69_0161 NZ_JHDO01000048.1 Protein Homology CDS 181047 182072 . + 0 ID=cds-WP_001139279.1;Parent=gene-AB69_RS21170;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AB69_RS21170;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 182177 182632 . + . ID=gene-AB69_RS21165;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AB69_RS21165;old_locus_tag=AB69_0162 NZ_JHDO01000048.1 Protein Homology CDS 182177 182632 . + 0 ID=cds-WP_000210739.1;Parent=gene-AB69_RS21165;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AB69_RS21165;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 182636 183424 . + . ID=gene-AB69_RS21160;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AB69_RS21160;old_locus_tag=AB69_0163 NZ_JHDO01000048.1 Protein Homology CDS 182636 183424 . + 0 ID=cds-WP_000565966.1;Parent=gene-AB69_RS21160;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AB69_RS21160;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 183424 184572 . + . ID=gene-AB69_RS21155;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AB69_RS21155;old_locus_tag=AB69_0164 NZ_JHDO01000048.1 Protein Homology CDS 183424 184572 . + 0 ID=cds-WP_000139654.1;Parent=gene-AB69_RS21155;Dbxref=GenBank:WP_000139654.1;Name=WP_000139654.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AB69_RS21155;product=lipid-A-disaccharide synthase;protein_id=WP_000139654.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 184569 185165 . + . ID=gene-AB69_RS21150;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AB69_RS21150;old_locus_tag=AB69_0165 NZ_JHDO01000048.1 Protein Homology CDS 184569 185165 . + 0 ID=cds-WP_000569430.1;Parent=gene-AB69_RS21150;Dbxref=GenBank:WP_000569430.1;Name=WP_000569430.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=AB69_RS21150;product=ribonuclease HII;protein_id=WP_000569430.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 185202 188684 . + . ID=gene-AB69_RS21145;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AB69_RS21145;old_locus_tag=AB69_0166 NZ_JHDO01000048.1 Protein Homology CDS 185202 188684 . + 0 ID=cds-WP_001294757.1;Parent=gene-AB69_RS21145;Dbxref=GenBank:WP_001294757.1;Name=WP_001294757.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AB69_RS21145;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 188697 189656 . + . ID=gene-AB69_RS21140;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AB69_RS21140;old_locus_tag=AB69_0167 NZ_JHDO01000048.1 Protein Homology CDS 188697 189656 . + 0 ID=cds-WP_000055741.1;Parent=gene-AB69_RS21140;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AB69_RS21140;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 189755 191896 . + . ID=gene-AB69_RS21135;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AB69_RS21135;old_locus_tag=AB69_0168 NZ_JHDO01000048.1 Protein Homology CDS 189755 191896 . + 0 ID=cds-WP_001020973.1;Parent=gene-AB69_RS21135;Dbxref=GenBank:WP_001020973.1;Name=WP_001020973.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AB69_RS21135;product=lysine decarboxylase LdcC;protein_id=WP_001020973.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 191953 192342 . + . ID=gene-AB69_RS21130;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AB69_RS21130;old_locus_tag=AB69_0169 NZ_JHDO01000048.1 Protein Homology CDS 191953 192342 . + 0 ID=cds-WP_000901099.1;Parent=gene-AB69_RS21130;Dbxref=GenBank:WP_000901099.1;Name=WP_000901099.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414729.4;locus_tag=AB69_RS21130;product=VOC family protein;protein_id=WP_000901099.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 192407 193705 . + . ID=gene-AB69_RS21125;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AB69_RS21125;old_locus_tag=AB69_0170 NZ_JHDO01000048.1 Protein Homology CDS 192407 193705 . + 0 ID=cds-WP_000176549.1;Parent=gene-AB69_RS21125;Dbxref=GenBank:WP_000176549.1;Name=WP_000176549.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414730.1;locus_tag=AB69_RS21125;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000176549.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 193754 194014 . - . ID=gene-AB69_RS21120;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AB69_RS21120;old_locus_tag=AB69_0171 NZ_JHDO01000048.1 Protein Homology CDS 193754 194014 . - 0 ID=cds-WP_000062312.1;Parent=gene-AB69_RS21120;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AB69_RS21120;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 194001 194201 . - . ID=gene-AB69_RS21115;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AB69_RS21115;old_locus_tag=AB69_0172 NZ_JHDO01000048.1 Protein Homology CDS 194001 194201 . - 0 ID=cds-WP_000417058.1;Parent=gene-AB69_RS21115;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AB69_RS21115;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 194367 194912 . + . ID=gene-AB69_RS21110;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AB69_RS21110;old_locus_tag=AB69_0173 NZ_JHDO01000048.1 Protein Homology CDS 194367 194912 . + 0 ID=cds-WP_001185290.1;Parent=gene-AB69_RS21110;Dbxref=GenBank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AB69_RS21110;product=YaeQ family protein;protein_id=WP_001185290.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 194909 195331 . + . ID=gene-AB69_RS21105;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AB69_RS21105;old_locus_tag=AB69_0174 NZ_JHDO01000048.1 Protein Homology CDS 194909 195331 . + 0 ID=cds-WP_000635537.1;Parent=gene-AB69_RS21105;Dbxref=GenBank:WP_000635537.1;Name=WP_000635537.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414733.1;locus_tag=AB69_RS21105;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635537.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 195345 196055 . + . ID=gene-AB69_RS21100;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AB69_RS21100;old_locus_tag=AB69_0175 NZ_JHDO01000048.1 Protein Homology CDS 195345 196055 . + 0 ID=cds-WP_000239163.1;Parent=gene-AB69_RS21100;Dbxref=GenBank:WP_000239163.1;Name=WP_000239163.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414734.1;locus_tag=AB69_RS21100;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239163.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 196255 197079 . - . ID=gene-AB69_RS21095;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AB69_RS21095;old_locus_tag=AB69_0176 NZ_JHDO01000048.1 Protein Homology CDS 196255 197079 . - 0 ID=cds-WP_001336393.1;Parent=gene-AB69_RS21095;Dbxref=GenBank:WP_001336393.1;Name=WP_001336393.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=AB69_RS21095;product=YaeF family permuted papain-like enzyme;protein_id=WP_001336393.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 197133 198851 . - . ID=gene-AB69_RS21090;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AB69_RS21090;old_locus_tag=AB69_0177 NZ_JHDO01000048.1 Protein Homology CDS 197133 198851 . - 0 ID=cds-WP_001260712.1;Parent=gene-AB69_RS21090;Dbxref=GenBank:WP_001260712.1;Name=WP_001260712.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AB69_RS21090;product=proline--tRNA ligase;protein_id=WP_001260712.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 198963 199670 . - . ID=gene-AB69_RS21085;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AB69_RS21085;old_locus_tag=AB69_0178 NZ_JHDO01000048.1 Protein Homology CDS 198963 199670 . - 0 ID=cds-WP_000094011.1;Parent=gene-AB69_RS21085;Dbxref=GenBank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AB69_RS21085;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 199667 200071 . - . ID=gene-AB69_RS21080;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AB69_RS21080;old_locus_tag=AB69_0179 NZ_JHDO01000048.1 Protein Homology CDS 199667 200071 . - 0 ID=cds-WP_001202329.1;Parent=gene-AB69_RS21080;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AB69_RS21080;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 200189 201004 . - . ID=gene-AB69_RS21075;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AB69_RS21075;old_locus_tag=AB69_0180 NZ_JHDO01000048.1 Protein Homology CDS 200189 201004 . - 0 ID=cds-WP_000874226.1;Parent=gene-AB69_RS21075;Dbxref=GenBank:WP_000874226.1;Name=WP_000874226.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414739.1;locus_tag=AB69_RS21075;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874226.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 201044 201697 . - . ID=gene-AB69_RS21070;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AB69_RS21070;old_locus_tag=AB69_0181 NZ_JHDO01000048.1 Protein Homology CDS 201044 201697 . - 0 ID=cds-WP_001294600.1;Parent=gene-AB69_RS21070;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AB69_RS21070;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 201690 202721 . - . ID=gene-AB69_RS21065;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AB69_RS21065;old_locus_tag=AB69_0182 NZ_JHDO01000048.1 Protein Homology CDS 201690 202721 . - 0 ID=cds-WP_000594006.1;Parent=gene-AB69_RS21065;Dbxref=GenBank:WP_000594006.1;Name=WP_000594006.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AB69_RS21065;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594006.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 202909 203484 . + . ID=gene-AB69_RS21060;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AB69_RS21060;old_locus_tag=AB69_0183 NZ_JHDO01000048.1 Protein Homology CDS 202909 203484 . + 0 ID=cds-WP_001140187.1;Parent=gene-AB69_RS21060;Dbxref=GenBank:WP_001140187.1;Name=WP_001140187.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AB69_RS21060;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11 NZ_JHDO01000048.1 RefSeq gene 203847 204793 . + . ID=gene-AB69_RS21055;Name=AB69_RS21055;end_range=204793,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS21055;old_locus_tag=AB69_0184;partial=true NZ_JHDO01000048.1 cmsearch rRNA 203847 204793 . + . ID=rna-AB69_RS21055;Parent=gene-AB69_RS21055;Dbxref=RFAM:RF00177;end_range=204793,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS21055;partial=true;product=16S ribosomal RNA NZ_JHDO01000048.1 cmsearch exon 203847 204793 . + . ID=exon-AB69_RS21055-1;Parent=rna-AB69_RS21055;Dbxref=RFAM:RF00177;end_range=204793,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS21055;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000049.1 1 19955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000049.1 RefSeq region 1 19955 . + . ID=NZ_JHDO01000049.1:1..19955;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000049.1 RefSeq gene 31 1193 . - . ID=gene-AB69_RS21050;Name=AB69_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21050;old_locus_tag=AB69_0185 NZ_JHDO01000049.1 Protein Homology CDS 932 1193 . - 0 ID=cds-WP_113706132.1;Parent=gene-AB69_RS21050;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS21050;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000049.1 Protein Homology CDS 31 932 . - 2 ID=cds-WP_113706132.1;Parent=gene-AB69_RS21050;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS21050;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000049.1 RefSeq pseudogene 1261 1383 . - . ID=gene-AB69_RS29165;Name=AB69_RS29165;end_range=1383,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29165;partial=true;pseudo=true;start_range=.,1261 NZ_JHDO01000049.1 Protein Homology CDS 1261 1383 . - 0 ID=cds-AB69_RS29165;Parent=gene-AB69_RS29165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1383,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=AB69_RS29165;partial=true;product=transposase;pseudo=true;start_range=.,1261;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 1621 1902 . + . ID=gene-AB69_RS0123445;Name=AB69_RS0123445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123445 NZ_JHDO01000049.1 Protein Homology CDS 1621 1902 . + 0 ID=cds-WP_000643630.1;Parent=gene-AB69_RS0123445;Dbxref=GenBank:WP_000643630.1;Name=WP_000643630.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568597.1;locus_tag=AB69_RS0123445;product=helix-turn-helix domain-containing protein;protein_id=WP_000643630.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 1937 2506 . + . ID=gene-AB69_RS21040;Name=hsp20;gbkey=Gene;gene=hsp20;gene_biotype=protein_coding;locus_tag=AB69_RS21040;old_locus_tag=AB69_0188 NZ_JHDO01000049.1 Protein Homology CDS 1937 2506 . + 0 ID=cds-WP_000350438.1;Parent=gene-AB69_RS21040;Dbxref=GenBank:WP_000350438.1;Name=WP_000350438.1;gbkey=CDS;gene=hsp20;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847761.1;locus_tag=AB69_RS21040;product=small heat shock protein sHSP20;protein_id=WP_000350438.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 2612 5461 . + . ID=gene-AB69_RS21035;Name=clpK;gbkey=Gene;gene=clpK;gene_biotype=protein_coding;locus_tag=AB69_RS21035;old_locus_tag=AB69_0189 NZ_JHDO01000049.1 Protein Homology CDS 2612 5461 . + 0 ID=cds-WP_032230765.1;Parent=gene-AB69_RS21035;Dbxref=GenBank:WP_032230765.1;Name=WP_032230765.1;gbkey=CDS;gene=clpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101613.1;locus_tag=AB69_RS21035;product=heat shock survival AAA family ATPase ClpK;protein_id=WP_032230765.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 5461 5652 . + . ID=gene-AB69_RS0123450;Name=AB69_RS0123450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123450 NZ_JHDO01000049.1 Protein Homology CDS 5461 5652 . + 0 ID=cds-WP_001446316.1;Parent=gene-AB69_RS0123450;Dbxref=GenBank:WP_001446316.1;Name=WP_001446316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187030.1;locus_tag=AB69_RS0123450;product=hypothetical protein;protein_id=WP_001446316.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 5713 7431 . + . ID=gene-AB69_RS21030;Name=AB69_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21030;old_locus_tag=AB69_0190 NZ_JHDO01000049.1 Protein Homology CDS 5713 7431 . + 0 ID=cds-WP_032230767.1;Parent=gene-AB69_RS21030;Dbxref=GenBank:WP_032230767.1;Name=WP_032230767.1;Ontology_term=GO:0030163,GO:0004176,GO:0004222,GO:0005524,GO:0008270,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA,ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000412525.1;locus_tag=AB69_RS21030;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=WP_032230767.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 7519 7977 . + . ID=gene-AB69_RS21025;Name=hsp20-GI;gbkey=Gene;gene=hsp20-GI;gene_biotype=protein_coding;locus_tag=AB69_RS21025;old_locus_tag=AB69_0191 NZ_JHDO01000049.1 Protein Homology CDS 7519 7977 . + 0 ID=cds-WP_001275372.1;Parent=gene-AB69_RS21025;Dbxref=GenBank:WP_001275372.1;Name=WP_001275372.1;gbkey=CDS;gene=hsp20-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275372.1;locus_tag=AB69_RS21025;product=small heat shock protein sHSP20-GI;protein_id=WP_001275372.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 8000 8914 . + . ID=gene-AB69_RS21020;Name=yfdX1;gbkey=Gene;gene=yfdX1;gene_biotype=protein_coding;locus_tag=AB69_RS21020;old_locus_tag=AB69_0192 NZ_JHDO01000049.1 Protein Homology CDS 8000 8914 . + 0 ID=cds-WP_001022485.1;Parent=gene-AB69_RS21020;Dbxref=GenBank:WP_001022485.1;Name=WP_001022485.1;gbkey=CDS;gene=yfdX1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022486.1;locus_tag=AB69_RS21020;product=heat resistance protein YfdX1;protein_id=WP_001022485.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 9017 9904 . + . ID=gene-AB69_RS21015;Name=yfdX2;gbkey=Gene;gene=yfdX2;gene_biotype=protein_coding;locus_tag=AB69_RS21015;old_locus_tag=AB69_0193 NZ_JHDO01000049.1 Protein Homology CDS 9017 9904 . + 0 ID=cds-WP_001567935.1;Parent=gene-AB69_RS21015;Dbxref=GenBank:WP_001567935.1;Name=WP_001567935.1;gbkey=CDS;gene=yfdX2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721696.1;locus_tag=AB69_RS21015;product=heat resistance protein YfdX2;protein_id=WP_001567935.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 10001 10612 . + . ID=gene-AB69_RS21010;Name=hdeD-GI;gbkey=Gene;gene=hdeD-GI;gene_biotype=protein_coding;locus_tag=AB69_RS21010;old_locus_tag=AB69_0194 NZ_JHDO01000049.1 Protein Homology CDS 10001 10612 . + 0 ID=cds-WP_001090783.1;Parent=gene-AB69_RS21010;Dbxref=GenBank:WP_001090783.1;Name=WP_001090783.1;gbkey=CDS;gene=hdeD-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090783.1;locus_tag=AB69_RS21010;product=heat resistance membrane protein HdeD-GI;protein_id=WP_001090783.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 10692 11837 . + . ID=gene-AB69_RS21005;Name=AB69_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS21005;old_locus_tag=AB69_0195 NZ_JHDO01000049.1 Protein Homology CDS 10692 11837 . + 0 ID=cds-WP_001723515.1;Parent=gene-AB69_RS21005;Dbxref=GenBank:WP_001723515.1;Name=WP_001723515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166993.1;locus_tag=AB69_RS21005;product=hypothetical protein;protein_id=WP_001723515.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 11827 12267 . + . ID=gene-AB69_RS0123455;Name=trx-GI;gbkey=Gene;gene=trx-GI;gene_biotype=protein_coding;locus_tag=AB69_RS0123455 NZ_JHDO01000049.1 Protein Homology CDS 11827 12267 . + 0 ID=cds-WP_000786816.1;Parent=gene-AB69_RS0123455;Dbxref=GenBank:WP_000786816.1;Name=WP_000786816.1;gbkey=CDS;gene=trx-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786816.1;locus_tag=AB69_RS0123455;product=heat resistance system thioredoxin Trx-GI;protein_id=WP_000786816.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 12271 13986 . + . ID=gene-AB69_RS21000;Name=kefB-GI;gbkey=Gene;gene=kefB-GI;gene_biotype=protein_coding;locus_tag=AB69_RS21000;old_locus_tag=AB69_0197 NZ_JHDO01000049.1 Protein Homology CDS 12271 13986 . + 0 ID=cds-WP_001567932.1;Parent=gene-AB69_RS21000;Dbxref=GenBank:WP_001567932.1;Name=WP_001567932.1;gbkey=CDS;gene=kefB-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156527.1;locus_tag=AB69_RS21000;product=heat resistance system K+/H+ antiporter KefB-GI;protein_id=WP_001567932.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 13983 14480 . + . ID=gene-AB69_RS20995;Name=psiE-GI;gbkey=Gene;gene=psiE-GI;gene_biotype=protein_coding;locus_tag=AB69_RS20995;old_locus_tag=AB69_0198 NZ_JHDO01000049.1 Protein Homology CDS 13983 14480 . + 0 ID=cds-WP_000843381.1;Parent=gene-AB69_RS20995;Dbxref=GenBank:WP_000843381.1;Name=WP_000843381.1;gbkey=CDS;gene=psiE-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843382.1;locus_tag=AB69_RS20995;product=heat resistance protein PsiE-GI;protein_id=WP_000843381.1;transl_table=11 NZ_JHDO01000049.1 RefSeq pseudogene 14458 15424 . + . ID=gene-AB69_RS26245;Name=AB69_RS26245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26245;pseudo=true NZ_JHDO01000049.1 Protein Homology CDS 14458 15424 . + 0 ID=cds-AB69_RS26245;Parent=gene-AB69_RS26245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196690.1;locus_tag=AB69_RS26245;product=zinc metalloprotease HtpX;pseudo=true;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 15449 16600 . + . ID=gene-AB69_RS20980;Name=AB69_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20980;old_locus_tag=AB69_0201 NZ_JHDO01000049.1 Protein Homology CDS 15449 16600 . + 0 ID=cds-WP_032230770.1;Parent=gene-AB69_RS20980;Dbxref=GenBank:WP_032230770.1;Name=WP_032230770.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323730.1;locus_tag=AB69_RS20980;product=S1C family serine protease;protein_id=WP_032230770.1;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 16825 17805 . - . ID=gene-AB69_RS20975;Name=AB69_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20975;old_locus_tag=AB69_0202 NZ_JHDO01000049.1 Protein Homology CDS 16825 17805 . - 0 ID=cds-WP_032230772.1;Parent=gene-AB69_RS20975;Dbxref=GenBank:WP_032230772.1;Name=WP_032230772.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270155.1;locus_tag=AB69_RS20975;product=IS5 family transposase;protein_id=WP_032230772.1;transl_table=11 NZ_JHDO01000049.1 RefSeq pseudogene 17856 18749 . - . ID=gene-AB69_RS20970;Name=AB69_RS20970;end_range=18749,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20970;old_locus_tag=AB69_0203;partial=true;pseudo=true NZ_JHDO01000049.1 Protein Homology CDS 17856 18749 . - 0 ID=cds-AB69_RS20970;Parent=gene-AB69_RS20970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=18749,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612005.1;locus_tag=AB69_RS20970;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000049.1 RefSeq gene 18762 19913 . - . ID=gene-AB69_RS20965;Name=AB69_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20965;old_locus_tag=AB69_0204 NZ_JHDO01000049.1 Protein Homology CDS 18762 19913 . - 0 ID=cds-WP_001254932.1-2;Parent=gene-AB69_RS20965;Dbxref=GenBank:WP_001254932.1;Name=WP_001254932.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AB69_RS20965;product=IS30-like element IS30 family transposase;protein_id=WP_001254932.1;transl_table=11 ##sequence-region NZ_JHDO01000050.1 1 1739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000050.1 RefSeq region 1 1739 . + . ID=NZ_JHDO01000050.1:1..1739;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000050.1 RefSeq gene 114 1739 . + . ID=gene-AB69_RS20960;Name=AB69_RS20960;end_range=1739,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS20960;old_locus_tag=AB69_0205;partial=true NZ_JHDO01000050.1 cmsearch rRNA 114 1739 . + . ID=rna-AB69_RS20960;Parent=gene-AB69_RS20960;Dbxref=RFAM:RF02541;end_range=1739,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS20960;partial=true;product=23S ribosomal RNA NZ_JHDO01000050.1 cmsearch exon 114 1739 . + . ID=exon-AB69_RS20960-1;Parent=rna-AB69_RS20960;Dbxref=RFAM:RF02541;end_range=1739,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS20960;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDO01000051.1 1 23094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000051.1 RefSeq region 1 23094 . + . ID=NZ_JHDO01000051.1:1..23094;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000051.1 RefSeq gene 1 1168 . + . ID=gene-AB69_RS0123460;Name=AB69_RS0123460;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0123460;partial=true;start_range=.,1 NZ_JHDO01000051.1 cmsearch rRNA 1 1168 . + . ID=rna-AB69_RS0123460;Parent=gene-AB69_RS0123460;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0123460;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000051.1 cmsearch exon 1 1168 . + . ID=exon-AB69_RS0123460-1;Parent=rna-AB69_RS0123460;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0123460;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000051.1 RefSeq gene 1264 1379 . + . ID=gene-AB69_RS20955;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS20955;old_locus_tag=AB69_0206 NZ_JHDO01000051.1 cmsearch rRNA 1264 1379 . + . ID=rna-AB69_RS20955;Parent=gene-AB69_RS20955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS20955;product=5S ribosomal RNA NZ_JHDO01000051.1 cmsearch exon 1264 1379 . + . ID=exon-AB69_RS20955-1;Parent=rna-AB69_RS20955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS20955;product=5S ribosomal RNA NZ_JHDO01000051.1 RefSeq gene 1434 1510 . + . ID=gene-AB69_RS20950;Name=AB69_RS20950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS20950;old_locus_tag=AB69_0207 NZ_JHDO01000051.1 tRNAscan-SE tRNA 1434 1510 . + . ID=rna-AB69_RS20950;Parent=gene-AB69_RS20950;anticodon=(pos:1468..1470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20950;product=tRNA-Asp NZ_JHDO01000051.1 tRNAscan-SE exon 1434 1510 . + . ID=exon-AB69_RS20950-1;Parent=rna-AB69_RS20950;anticodon=(pos:1468..1470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20950;product=tRNA-Asp NZ_JHDO01000051.1 RefSeq gene 1673 2476 . + . ID=gene-AB69_RS20945;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AB69_RS20945;old_locus_tag=AB69_0208 NZ_JHDO01000051.1 Protein Homology CDS 1673 2476 . + 0 ID=cds-WP_000997010.1;Parent=gene-AB69_RS20945;Dbxref=GenBank:WP_000997010.1;Name=WP_000997010.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AB69_RS20945;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997010.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 2473 3387 . - . ID=gene-AB69_RS20940;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AB69_RS20940;old_locus_tag=AB69_0209 NZ_JHDO01000051.1 Protein Homology CDS 2473 3387 . - 0 ID=cds-WP_000648572.1;Parent=gene-AB69_RS20940;Dbxref=GenBank:WP_000648572.1;Name=WP_000648572.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AB69_RS20940;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648572.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 3628 4428 . + . ID=gene-AB69_RS20935;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AB69_RS20935;old_locus_tag=AB69_0210 NZ_JHDO01000051.1 Protein Homology CDS 3628 4428 . + 0 ID=cds-WP_001230983.1;Parent=gene-AB69_RS20935;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AB69_RS20935;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 4432 5055 . + . ID=gene-AB69_RS20930;Name=yafE;gbkey=Gene;gene=yafE;gene_biotype=protein_coding;locus_tag=AB69_RS20930;old_locus_tag=AB69_0211 NZ_JHDO01000051.1 Protein Homology CDS 4432 5055 . + 0 ID=cds-WP_000016007.1;Parent=gene-AB69_RS20930;Dbxref=GenBank:WP_000016007.1;Name=WP_000016007.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;gene=yafE;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=AB69_RS20930;product=class I SAM-dependent methyltransferase;protein_id=WP_000016007.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 5103 6461 . - . ID=gene-AB69_RS20925;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AB69_RS20925;old_locus_tag=AB69_0212 NZ_JHDO01000051.1 Protein Homology CDS 5103 6461 . - 0 ID=cds-WP_032235663.1;Parent=gene-AB69_RS20925;Dbxref=GenBank:WP_032235663.1;Name=WP_032235663.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AB69_RS20925;product=murein transglycosylase D;protein_id=WP_032235663.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 6533 7288 . - . ID=gene-AB69_RS20920;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AB69_RS20920;old_locus_tag=AB69_0213 NZ_JHDO01000051.1 Protein Homology CDS 6533 7288 . - 0 ID=cds-WP_001052715.1;Parent=gene-AB69_RS20920;Dbxref=GenBank:WP_001052715.1;Name=WP_001052715.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AB69_RS20920;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052715.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 7322 8044 . + . ID=gene-AB69_RS20915;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AB69_RS20915;old_locus_tag=AB69_0214 NZ_JHDO01000051.1 Protein Homology CDS 7322 8044 . + 0 ID=cds-WP_001326702.1;Parent=gene-AB69_RS20915;Dbxref=GenBank:WP_001326702.1;Name=WP_001326702.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AB69_RS20915;product=class I SAM-dependent methyltransferase;protein_id=WP_001326702.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 8041 8508 . - . ID=gene-AB69_RS20910;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AB69_RS20910;old_locus_tag=AB69_0215 NZ_JHDO01000051.1 Protein Homology CDS 8041 8508 . - 0 ID=cds-WP_000917883.1;Parent=gene-AB69_RS20910;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AB69_RS20910;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 8573 9304 . + . ID=gene-AB69_RS20905;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AB69_RS20905;old_locus_tag=AB69_0216 NZ_JHDO01000051.1 Protein Homology CDS 8573 9304 . + 0 ID=cds-WP_001340895.1;Parent=gene-AB69_RS20905;Dbxref=GenBank:WP_001340895.1;Name=WP_001340895.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414751.1;locus_tag=AB69_RS20905;product=DNA polymerase III subunit epsilon;protein_id=WP_001340895.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 9437 9513 . + . ID=gene-AB69_RS20900;Name=AB69_RS20900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS20900;old_locus_tag=AB69_0217 NZ_JHDO01000051.1 tRNAscan-SE tRNA 9437 9513 . + . ID=rna-AB69_RS20900;Parent=gene-AB69_RS20900;anticodon=(pos:9471..9473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20900;product=tRNA-Asp NZ_JHDO01000051.1 tRNAscan-SE exon 9437 9513 . + . ID=exon-AB69_RS20900-1;Parent=rna-AB69_RS20900;anticodon=(pos:9471..9473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20900;product=tRNA-Asp NZ_JHDO01000051.1 RefSeq gene 9841 10626 . + . ID=gene-AB69_RS20895;Name=AB69_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20895;old_locus_tag=AB69_0218 NZ_JHDO01000051.1 Protein Homology CDS 9841 10626 . + 0 ID=cds-WP_032230783.1;Parent=gene-AB69_RS20895;Dbxref=GenBank:WP_032230783.1;Name=WP_032230783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414752.1;locus_tag=AB69_RS20895;product=hypothetical protein;protein_id=WP_032230783.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 10763 11242 . - . ID=gene-AB69_RS0123465;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;locus_tag=AB69_RS0123465 NZ_JHDO01000051.1 Protein Homology CDS 10763 11242 . - 0 ID=cds-WP_001236645.1;Parent=gene-AB69_RS0123465;Dbxref=GenBank:WP_001236645.1;Name=WP_001236645.1;gbkey=CDS;gene=ykfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165307.1;locus_tag=AB69_RS0123465;product=protein YkfM;protein_id=WP_001236645.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 11252 12166 . - . ID=gene-AB69_RS20890;Name=AB69_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20890;old_locus_tag=AB69_0219 NZ_JHDO01000051.1 Protein Homology CDS 11252 12166 . - 0 ID=cds-WP_000908066.1;Parent=gene-AB69_RS20890;Dbxref=GenBank:WP_000908066.1;Name=WP_000908066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908053.1;locus_tag=AB69_RS20890;product=hypothetical protein;protein_id=WP_000908066.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 12210 12692 . - . ID=gene-AB69_RS20885;Name=AB69_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20885;old_locus_tag=AB69_0220 NZ_JHDO01000051.1 Protein Homology CDS 12210 12692 . - 0 ID=cds-WP_001284199.1;Parent=gene-AB69_RS20885;Dbxref=GenBank:WP_001284199.1;Name=WP_001284199.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284197.1;locus_tag=AB69_RS20885;product=Hcp family type VI secretion system effector;protein_id=WP_001284199.1;transl_table=11 NZ_JHDO01000051.1 RefSeq pseudogene 12716 13354 . - . ID=gene-AB69_RS0123470;Name=AB69_RS0123470;end_range=13354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123470;partial=true;pseudo=true NZ_JHDO01000051.1 Protein Homology CDS 12716 13354 . - 0 ID=cds-AB69_RS0123470;Parent=gene-AB69_RS0123470;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087757.1;locus_tag=AB69_RS0123470;partial=true;product=VasL domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000051.1 RefSeq pseudogene 13352 14151 . - . ID=gene-AB69_RS30160;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=AB69_RS30160;partial=true;pseudo=true;start_range=.,13352 NZ_JHDO01000051.1 Protein Homology CDS 13352 14151 . - 0 ID=cds-AB69_RS30160;Parent=gene-AB69_RS30160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308255.1;locus_tag=AB69_RS30160;partial=true;product=type VI secretion system baseplate subunit TssG;pseudo=true;start_range=.,13352;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 14115 15965 . - . ID=gene-AB69_RS20880;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AB69_RS20880;old_locus_tag=AB69_0224 NZ_JHDO01000051.1 Protein Homology CDS 14115 15965 . - 0 ID=cds-WP_000393852.1;Parent=gene-AB69_RS20880;Dbxref=GenBank:WP_000393852.1;Name=WP_000393852.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=AB69_RS20880;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000393852.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 15969 16382 . - . ID=gene-AB69_RS20875;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=AB69_RS20875;old_locus_tag=AB69_0225 NZ_JHDO01000051.1 Protein Homology CDS 15969 16382 . - 0 ID=cds-WP_000611744.1;Parent=gene-AB69_RS20875;Dbxref=GenBank:WP_000611744.1;Name=WP_000611744.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308257.1;locus_tag=AB69_RS20875;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000611744.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 16389 17864 . - . ID=gene-AB69_RS20870;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AB69_RS20870;old_locus_tag=AB69_0226 NZ_JHDO01000051.1 Protein Homology CDS 16389 17864 . - 0 ID=cds-WP_000056989.1;Parent=gene-AB69_RS20870;Dbxref=GenBank:WP_000056989.1;Name=WP_000056989.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501045.1;locus_tag=AB69_RS20870;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000056989.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 17915 18139 . - . ID=gene-AB69_RS20865;Name=AB69_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20865;old_locus_tag=AB69_0227 NZ_JHDO01000051.1 Protein Homology CDS 17915 18139 . - 0 ID=cds-WP_000123970.1;Parent=gene-AB69_RS20865;Dbxref=GenBank:WP_000123970.1;Name=WP_000123970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308259.1;locus_tag=AB69_RS20865;product=hypothetical protein;protein_id=WP_000123970.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 18174 18674 . - . ID=gene-AB69_RS20860;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=AB69_RS20860;old_locus_tag=AB69_0228 NZ_JHDO01000051.1 Protein Homology CDS 18174 18674 . - 0 ID=cds-WP_001483317.1;Parent=gene-AB69_RS20860;Dbxref=GenBank:WP_001483317.1;Name=WP_001483317.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=AB69_RS20860;product=type VI secretion system contractile sheath small subunit;protein_id=WP_001483317.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 19369 19887 . + . ID=gene-AB69_RS20850;Name=AB69_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20850;old_locus_tag=AB69_0230 NZ_JHDO01000051.1 Protein Homology CDS 19369 19887 . + 0 ID=cds-WP_001142958.1;Parent=gene-AB69_RS20850;Dbxref=GenBank:WP_001142958.1;Name=WP_001142958.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=AB69_RS20850;product=Hcp family type VI secretion system effector;protein_id=WP_001142958.1;transl_table=11 NZ_JHDO01000051.1 RefSeq pseudogene 20010 21419 . + . ID=gene-AB69_RS20845;Name=AB69_RS20845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20845;old_locus_tag=AB69_0231;partial=true;pseudo=true;start_range=.,20010 NZ_JHDO01000051.1 Protein Homology CDS 20010 21419 . + 0 ID=cds-AB69_RS20845;Parent=gene-AB69_RS20845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763881.1;locus_tag=AB69_RS20845;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,20010;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 21397 21789 . + . ID=gene-AB69_RS0123480;Name=AB69_RS0123480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123480 NZ_JHDO01000051.1 Protein Homology CDS 21397 21789 . + 0 ID=cds-WP_001101839.1;Parent=gene-AB69_RS0123480;Dbxref=GenBank:WP_001101839.1;Name=WP_001101839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101839.1;locus_tag=AB69_RS0123480;product=hypothetical protein;protein_id=WP_001101839.1;transl_table=11 NZ_JHDO01000051.1 RefSeq gene 22220 23094 . + . ID=gene-AB69_RS20840;Name=AB69_RS20840;end_range=23094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20840;old_locus_tag=AB69_0233;partial=true NZ_JHDO01000051.1 Protein Homology CDS 22220 23094 . + 0 ID=cds-WP_032235664.1;Parent=gene-AB69_RS20840;Dbxref=GenBank:WP_032235664.1;Name=WP_032235664.1;Ontology_term=GO:0004803;end_range=23094,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS20840;partial=true;product=ISAs1 family transposase;protein_id=WP_032235664.1;transl_table=11 ##sequence-region NZ_JHDO01000052.1 1 25200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000052.1 RefSeq region 1 25200 . + . ID=NZ_JHDO01000052.1:1..25200;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000052.1 RefSeq pseudogene 1 512 . + . ID=gene-AB69_RS20835;Name=AB69_RS20835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20835;old_locus_tag=AB69_0234;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000052.1 Protein Homology CDS 1 512 . + 2 ID=cds-AB69_RS20835;Parent=gene-AB69_RS20835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS20835;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 553 1323 . - . ID=gene-AB69_RS20830;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AB69_RS20830;old_locus_tag=AB69_0235 NZ_JHDO01000052.1 Protein Homology CDS 553 1323 . - 0 ID=cds-WP_001118036.1;Parent=gene-AB69_RS20830;Dbxref=GenBank:WP_001118036.1;Name=WP_001118036.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414754.1;locus_tag=AB69_RS20830;product=2-oxoglutaramate amidase;protein_id=WP_001118036.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 1504 1950 . + . ID=gene-AB69_RS20825;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AB69_RS20825;old_locus_tag=AB69_0236 NZ_JHDO01000052.1 Protein Homology CDS 1504 1950 . + 0 ID=cds-WP_001308392.1;Parent=gene-AB69_RS20825;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AB69_RS20825;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 1993 4437 . - . ID=gene-AB69_RS20820;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AB69_RS20820;old_locus_tag=AB69_0237 NZ_JHDO01000052.1 Protein Homology CDS 1993 4437 . - 0 ID=cds-WP_000973083.1;Parent=gene-AB69_RS20820;Dbxref=GenBank:WP_000973083.1;Name=WP_000973083.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AB69_RS20820;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973083.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 4677 5255 . + . ID=gene-AB69_RS20815;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AB69_RS20815;old_locus_tag=AB69_0238 NZ_JHDO01000052.1 Protein Homology CDS 4677 5255 . + 0 ID=cds-WP_000284050.1;Parent=gene-AB69_RS20815;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AB69_RS20815;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 5461 6228 . + . ID=gene-AB69_RS20810;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AB69_RS20810;old_locus_tag=AB69_0239 NZ_JHDO01000052.1 Protein Homology CDS 5461 6228 . + 0 ID=cds-WP_000333380.1;Parent=gene-AB69_RS20810;Dbxref=GenBank:WP_000333380.1;Name=WP_000333380.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AB69_RS20810;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 6199 6939 . - . ID=gene-AB69_RS20805;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AB69_RS20805;old_locus_tag=AB69_0240 NZ_JHDO01000052.1 Protein Homology CDS 6199 6939 . - 0 ID=cds-WP_001225679.1;Parent=gene-AB69_RS20805;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AB69_RS20805;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 7095 7373 . - . ID=gene-AB69_RS0123485;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AB69_RS0123485;old_locus_tag=AB69_0241 NZ_JHDO01000052.1 Protein Homology CDS 7095 7373 . - 0 ID=cds-WP_000615983.1;Parent=gene-AB69_RS0123485;Dbxref=GenBank:WP_000615983.1;Name=WP_000615983.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AB69_RS0123485;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615983.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 7376 7636 . - . ID=gene-AB69_RS20800;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AB69_RS20800;old_locus_tag=AB69_0242 NZ_JHDO01000052.1 Protein Homology CDS 7376 7636 . - 0 ID=cds-WP_000729703.1;Parent=gene-AB69_RS20800;Dbxref=GenBank:WP_000729703.1;Name=WP_000729703.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414761.1;locus_tag=AB69_RS20800;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729703.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 7846 8595 . + . ID=gene-AB69_RS20795;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AB69_RS20795;old_locus_tag=AB69_0244 NZ_JHDO01000052.1 Protein Homology CDS 7846 8595 . + 0 ID=cds-WP_000056849.1;Parent=gene-AB69_RS20795;Dbxref=GenBank:WP_000056849.1;Name=WP_000056849.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414762.1;locus_tag=AB69_RS20795;product=C40 family peptidase;protein_id=WP_000056849.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 8771 9268 . + . ID=gene-AB69_RS20790;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AB69_RS20790;old_locus_tag=AB69_0245 NZ_JHDO01000052.1 Protein Homology CDS 8771 9268 . + 0 ID=cds-WP_000006255.1;Parent=gene-AB69_RS20790;Dbxref=GenBank:WP_000006255.1;Name=WP_000006255.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414763.1;locus_tag=AB69_RS20790;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006255.1;transl_table=11 NZ_JHDO01000052.1 RefSeq pseudogene 9492 11210 . - . ID=gene-AB69_RS20785;Name=AB69_RS20785;end_range=11210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20785;old_locus_tag=AB69_0246;partial=true;pseudo=true NZ_JHDO01000052.1 Protein Homology CDS 9492 11210 . - 0 ID=cds-AB69_RS20785;Parent=gene-AB69_RS20785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0044780,GO:0071978;end_range=11210,.;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AB69_RS20785;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 11176 11961 . + . ID=gene-AB69_RS20780;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AB69_RS20780;old_locus_tag=AB69_0247 NZ_JHDO01000052.1 Protein Homology CDS 11176 11961 . + 0 ID=cds-WP_000207552.1;Parent=gene-AB69_RS20780;Dbxref=GenBank:WP_000207552.1;Name=WP_000207552.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706230.2;locus_tag=AB69_RS20780;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_000207552.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 12032 13087 . + . ID=gene-AB69_RS20775;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AB69_RS20775;old_locus_tag=AB69_0248 NZ_JHDO01000052.1 Protein Homology CDS 12032 13087 . + 0 ID=cds-WP_001226164.1;Parent=gene-AB69_RS20775;Dbxref=GenBank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AB69_RS20775;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 13139 13432 . + . ID=gene-AB69_RS20770;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AB69_RS20770;old_locus_tag=AB69_0249 NZ_JHDO01000052.1 Protein Homology CDS 13139 13432 . + 0 ID=cds-WP_000554758.1;Parent=gene-AB69_RS20770;Dbxref=GenBank:WP_000554758.1;Name=WP_000554758.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414767.1;locus_tag=AB69_RS20770;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554758.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 13435 13833 . + . ID=gene-AB69_RS20765;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AB69_RS20765;old_locus_tag=AB69_0250 NZ_JHDO01000052.1 Protein Homology CDS 13435 13833 . + 0 ID=cds-WP_001263489.1;Parent=gene-AB69_RS20765;Dbxref=GenBank:WP_001263489.1;Name=WP_001263489.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414768.1;locus_tag=AB69_RS20765;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_001263489.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 13843 14295 . + . ID=gene-AB69_RS20760;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AB69_RS20760;old_locus_tag=AB69_0251 NZ_JHDO01000052.1 Protein Homology CDS 13843 14295 . + 0 ID=cds-WP_001059892.1;Parent=gene-AB69_RS20760;Dbxref=GenBank:WP_001059892.1;Name=WP_001059892.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414769.1;locus_tag=AB69_RS20760;product=GNAT family N-acetyltransferase;protein_id=WP_001059892.1;transl_table=11 NZ_JHDO01000052.1 RefSeq pseudogene 14613 14819 . + . ID=gene-AB69_RS20755;Name=AB69_RS20755;end_range=14819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20755;old_locus_tag=AB69_0252;partial=true;pseudo=true NZ_JHDO01000052.1 Protein Homology CDS 14613 14819 . + 0 ID=cds-AB69_RS20755;Parent=gene-AB69_RS20755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AB69_RS20755;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JHDO01000052.1 RefSeq pseudogene 14830 15336 . + . ID=gene-AB69_RS20750;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=AB69_RS20750;old_locus_tag=AB69_0253;partial=true;pseudo=true;start_range=.,14830 NZ_JHDO01000052.1 Protein Homology CDS 14830 15336 . + 0 ID=cds-AB69_RS20750;Parent=gene-AB69_RS20750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AB69_RS20750;partial=true;product=peptide chain release factor H;pseudo=true;start_range=.,14830;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 15393 16850 . - . ID=gene-AB69_RS20745;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AB69_RS20745;old_locus_tag=AB69_0254 NZ_JHDO01000052.1 Protein Homology CDS 15393 16850 . - 0 ID=cds-WP_001292994.1;Parent=gene-AB69_RS20745;Dbxref=GenBank:WP_001292994.1;Name=WP_001292994.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414772.1;locus_tag=AB69_RS20745;product=cytosol nonspecific dipeptidase;protein_id=WP_001292994.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 17111 17569 . + . ID=gene-AB69_RS20740;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AB69_RS20740;old_locus_tag=AB69_0255 NZ_JHDO01000052.1 Protein Homology CDS 17111 17569 . + 0 ID=cds-WP_001291990.1;Parent=gene-AB69_RS20740;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AB69_RS20740;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 17661 18905 . + . ID=gene-AB69_RS20735;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AB69_RS20735;old_locus_tag=AB69_0256 NZ_JHDO01000052.1 Protein Homology CDS 17661 18905 . + 0 ID=cds-WP_000189532.1;Parent=gene-AB69_RS20735;Dbxref=GenBank:WP_000189532.1;Name=WP_000189532.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AB69_RS20735;product=esterase FrsA;protein_id=WP_000189532.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 18963 19364 . + . ID=gene-AB69_RS20730;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AB69_RS20730;old_locus_tag=AB69_0257 NZ_JHDO01000052.1 Protein Homology CDS 18963 19364 . + 0 ID=cds-WP_000174677.1;Parent=gene-AB69_RS20730;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AB69_RS20730;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 19403 20458 . - . ID=gene-AB69_RS20725;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AB69_RS20725;old_locus_tag=AB69_0258 NZ_JHDO01000052.1 Protein Homology CDS 19403 20458 . - 0 ID=cds-WP_000749863.1;Parent=gene-AB69_RS20725;Dbxref=GenBank:WP_000749863.1;Name=WP_000749863.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414776.1;locus_tag=AB69_RS20725;product=phosphoporin PhoE;protein_id=WP_000749863.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 20746 21849 . + . ID=gene-AB69_RS20720;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AB69_RS20720;old_locus_tag=AB69_0259 NZ_JHDO01000052.1 Protein Homology CDS 20746 21849 . + 0 ID=cds-WP_001285288.1;Parent=gene-AB69_RS20720;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AB69_RS20720;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 21861 23114 . + . ID=gene-AB69_RS20715;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AB69_RS20715;old_locus_tag=AB69_0260 NZ_JHDO01000052.1 Protein Homology CDS 21861 23114 . + 0 ID=cds-WP_000893278.1;Parent=gene-AB69_RS20715;Dbxref=GenBank:WP_000893278.1;Name=WP_000893278.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AB69_RS20715;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 23229 23304 . + . ID=gene-AB69_RS20710;Name=AB69_RS20710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS20710;old_locus_tag=AB69_0261 NZ_JHDO01000052.1 tRNAscan-SE tRNA 23229 23304 . + . ID=rna-AB69_RS20710;Parent=gene-AB69_RS20710;anticodon=(pos:23262..23264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20710;product=tRNA-Thr NZ_JHDO01000052.1 tRNAscan-SE exon 23229 23304 . + . ID=exon-AB69_RS20710-1;Parent=rna-AB69_RS20710;anticodon=(pos:23262..23264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS20710;product=tRNA-Thr NZ_JHDO01000052.1 RefSeq gene 23468 24664 . + . ID=gene-AB69_RS20705;Name=AB69_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20705;old_locus_tag=AB69_0262 NZ_JHDO01000052.1 Protein Homology CDS 23468 24664 . + 0 ID=cds-WP_032230790.1;Parent=gene-AB69_RS20705;Dbxref=GenBank:WP_032230790.1;Name=WP_032230790.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683255.1;locus_tag=AB69_RS20705;product=tyrosine-type recombinase/integrase;protein_id=WP_032230790.1;transl_table=11 NZ_JHDO01000052.1 RefSeq gene 24836 25200 . - . ID=gene-AB69_RS20700;Name=AB69_RS20700;end_range=25200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20700;old_locus_tag=AB69_0263;partial=true NZ_JHDO01000052.1 Protein Homology CDS 24836 25200 . - 2 ID=cds-WP_032235668.1;Parent=gene-AB69_RS20700;Dbxref=GenBank:WP_032235668.1;Name=WP_032235668.1;end_range=25200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS20700;partial=true;product=IS3 family transposase;protein_id=WP_032235668.1;transl_table=11 ##sequence-region NZ_JHDO01000053.1 1 10680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000053.1 RefSeq region 1 10680 . + . ID=NZ_JHDO01000053.1:1..10680;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000053.1 RefSeq gene 1 327 . + . ID=gene-AB69_RS20695;Name=AB69_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20695;old_locus_tag=AB69_0264;partial=true;start_range=.,1 NZ_JHDO01000053.1 Protein Homology CDS 1 327 . + 0 ID=cds-WP_021558203.1;Parent=gene-AB69_RS20695;Dbxref=GenBank:WP_021558203.1;Name=WP_021558203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS20695;partial=true;product=IS3 family transposase;protein_id=WP_021558203.1;start_range=.,1;transl_table=11 NZ_JHDO01000053.1 RefSeq pseudogene 381 452 . + . ID=gene-AB69_RS29180;Name=AB69_RS29180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29180;partial=true;pseudo=true;start_range=.,381 NZ_JHDO01000053.1 Protein Homology CDS 381 452 . + 0 ID=cds-AB69_RS29180;Parent=gene-AB69_RS29180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AB69_RS29180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,381;transl_table=11 NZ_JHDO01000053.1 RefSeq pseudogene 463 1160 . - . ID=gene-AB69_RS28325;Name=AB69_RS28325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28325;pseudo=true NZ_JHDO01000053.1 Protein Homology CDS 463 1160 . - 0 ID=cds-AB69_RS28325;Parent=gene-AB69_RS28325;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB69_RS28325;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 1247 1315 . - . ID=gene-AB69_RS30165;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AB69_RS30165 NZ_JHDO01000053.1 Protein Homology CDS 1247 1315 . - 0 ID=cds-WP_211180522.1;Parent=gene-AB69_RS30165;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AB69_RS30165;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 1452 1973 . + . ID=gene-AB69_RS20675;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AB69_RS20675;old_locus_tag=AB69_0268 NZ_JHDO01000053.1 Protein Homology CDS 1452 1973 . + 0 ID=cds-WP_001283626.1;Parent=gene-AB69_RS20675;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AB69_RS20675;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 1970 2923 . + . ID=gene-AB69_RS20670;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AB69_RS20670;old_locus_tag=AB69_0269 NZ_JHDO01000053.1 Protein Homology CDS 1970 2923 . + 0 ID=cds-WP_001068910.1;Parent=gene-AB69_RS20670;Dbxref=GenBank:WP_001068910.1;Name=WP_001068910.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AB69_RS20670;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001068910.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 3010 5334 . + . ID=gene-AB69_RS20665;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AB69_RS20665;old_locus_tag=AB69_0270 NZ_JHDO01000053.1 Protein Homology CDS 3010 5334 . + 0 ID=cds-WP_000188262.1;Parent=gene-AB69_RS20665;Dbxref=GenBank:WP_000188262.1;Name=WP_000188262.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AB69_RS20665;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_000188262.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 5379 6281 . + . ID=gene-AB69_RS20660;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AB69_RS20660;old_locus_tag=AB69_0271 NZ_JHDO01000053.1 Protein Homology CDS 5379 6281 . + 0 ID=cds-WP_000879164.1;Parent=gene-AB69_RS20660;Dbxref=GenBank:WP_000879164.1;Name=WP_000879164.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AB69_RS20660;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879164.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 6278 7276 . + . ID=gene-AB69_RS20655;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AB69_RS20655;old_locus_tag=AB69_0272 NZ_JHDO01000053.1 Protein Homology CDS 6278 7276 . + 0 ID=cds-WP_000125187.1;Parent=gene-AB69_RS20655;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AB69_RS20655;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 7273 8229 . + . ID=gene-AB69_RS20650;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AB69_RS20650;old_locus_tag=AB69_0273 NZ_JHDO01000053.1 Protein Homology CDS 7273 8229 . + 0 ID=cds-WP_000684865.1;Parent=gene-AB69_RS20650;Dbxref=GenBank:WP_000684865.1;Name=WP_000684865.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AB69_RS20650;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684865.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 8230 8997 . + . ID=gene-AB69_RS0123495;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AB69_RS0123495;old_locus_tag=AB69_0275 NZ_JHDO01000053.1 Protein Homology CDS 8230 8997 . + 0 ID=cds-WP_032230794.1;Parent=gene-AB69_RS0123495;Dbxref=GenBank:WP_032230794.1;Name=WP_032230794.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AB69_RS0123495;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_032230794.1;transl_table=11 NZ_JHDO01000053.1 RefSeq gene 9554 9811 . - . ID=gene-AB69_RS29660;Name=AB69_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29660;old_locus_tag=AB69_0276 NZ_JHDO01000053.1 GeneMarkS-2+ CDS 9554 9811 . - 0 ID=cds-WP_000177057.1;Parent=gene-AB69_RS29660;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29660;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JHDO01000053.1 RefSeq pseudogene 9894 10680 . - . ID=gene-AB69_RS25590;Name=AB69_RS25590;end_range=10680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS25590;old_locus_tag=AB69_0277;partial=true;pseudo=true NZ_JHDO01000053.1 Protein Homology CDS 9894 10680 . - 2 ID=cds-AB69_RS25590;Parent=gene-AB69_RS25590;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10680,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AB69_RS25590;partial=true;product=IS3-like element ISEc52 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000054.1 1 50615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000054.1 RefSeq region 1 50615 . + . ID=NZ_JHDO01000054.1:1..50615;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000054.1 RefSeq gene 38 1200 . + . ID=gene-AB69_RS20635;Name=AB69_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20635;old_locus_tag=AB69_0279 NZ_JHDO01000054.1 Protein Homology CDS 38 299 . + 0 ID=cds-WP_113706132.1-2;Parent=gene-AB69_RS20635;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS20635;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000054.1 Protein Homology CDS 299 1200 . + 2 ID=cds-WP_113706132.1-2;Parent=gene-AB69_RS20635;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS20635;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 1362 1568 . - . ID=gene-AB69_RS0123510;Name=AB69_RS0123510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123510 NZ_JHDO01000054.1 Protein Homology CDS 1362 1568 . - 0 ID=cds-WP_000288254.1;Parent=gene-AB69_RS0123510;Dbxref=GenBank:WP_000288254.1;Name=WP_000288254.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288254.1;locus_tag=AB69_RS0123510;product=helix-turn-helix transcriptional regulator;protein_id=WP_000288254.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 1711 2286 . - . ID=gene-AB69_RS20630;Name=AB69_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20630;old_locus_tag=AB69_0280 NZ_JHDO01000054.1 Protein Homology CDS 1711 2286 . - 0 ID=cds-WP_032230800.1;Parent=gene-AB69_RS20630;Dbxref=GenBank:WP_032230800.1;Name=WP_032230800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567940.1;locus_tag=AB69_RS20630;product=rolling circle replication-associated protein;protein_id=WP_032230800.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 2781 3947 . + . ID=gene-AB69_RS20625;Name=AB69_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20625;old_locus_tag=AB69_0281 NZ_JHDO01000054.1 Protein Homology CDS 2781 3947 . + 0 ID=cds-WP_032230801.1;Parent=gene-AB69_RS20625;Dbxref=GenBank:WP_032230801.1;Name=WP_032230801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068158.1;locus_tag=AB69_RS20625;product=hypothetical protein;protein_id=WP_032230801.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 4045 4908 . + . ID=gene-AB69_RS20620;Name=AB69_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20620;old_locus_tag=AB69_0282 NZ_JHDO01000054.1 Protein Homology CDS 4045 4908 . + 0 ID=cds-WP_032230803.1;Parent=gene-AB69_RS20620;Dbxref=GenBank:WP_032230803.1;Name=WP_032230803.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026173.1;locus_tag=AB69_RS20620;product=GTPase family protein;protein_id=WP_032230803.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 5000 5821 . + . ID=gene-AB69_RS20615;Name=AB69_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20615;old_locus_tag=AB69_0283 NZ_JHDO01000054.1 Protein Homology CDS 5000 5821 . + 0 ID=cds-WP_032230804.1;Parent=gene-AB69_RS20615;Dbxref=GenBank:WP_032230804.1;Name=WP_032230804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414786.4;locus_tag=AB69_RS20615;product=DUF932 domain-containing protein;protein_id=WP_032230804.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 6038 6739 . + . ID=gene-AB69_RS20610;Name=yfjR;gbkey=Gene;gene=yfjR;gene_biotype=protein_coding;locus_tag=AB69_RS20610;old_locus_tag=AB69_0284 NZ_JHDO01000054.1 Protein Homology CDS 6038 6739 . + 0 ID=cds-WP_032230805.1;Parent=gene-AB69_RS20610;Dbxref=GenBank:WP_032230805.1;Name=WP_032230805.1;gbkey=CDS;gene=yfjR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417123.1;locus_tag=AB69_RS20610;product=WYL domain-containing protein;protein_id=WP_032230805.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 6780 7016 . + . ID=gene-AB69_RS20605;Name=ypjK;gbkey=Gene;gene=ypjK;gene_biotype=protein_coding;locus_tag=AB69_RS20605;old_locus_tag=AB69_0285 NZ_JHDO01000054.1 Protein Homology CDS 6780 7016 . + 0 ID=cds-WP_032230807.1;Parent=gene-AB69_RS20605;Dbxref=GenBank:WP_032230807.1;Name=WP_032230807.1;gbkey=CDS;gene=ypjK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144029.1;locus_tag=AB69_RS20605;product=protein YpjK;protein_id=WP_032230807.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 7016 7456 . + . ID=gene-AB69_RS20600;Name=yfjS;gbkey=Gene;gene=yfjS;gene_biotype=protein_coding;locus_tag=AB69_RS20600;old_locus_tag=AB69_0286 NZ_JHDO01000054.1 Protein Homology CDS 7016 7456 . + 0 ID=cds-WP_032230808.1;Parent=gene-AB69_RS20600;Dbxref=GenBank:WP_032230808.1;Name=WP_032230808.1;gbkey=CDS;gene=yfjS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417124.4;locus_tag=AB69_RS20600;product=YfjS/YafY family lipoprotein;protein_id=WP_032230808.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 7480 7947 . + . ID=gene-AB69_RS20595;Name=yfjT;gbkey=Gene;gene=yfjT;gene_biotype=protein_coding;locus_tag=AB69_RS20595;old_locus_tag=AB69_0287 NZ_JHDO01000054.1 Protein Homology CDS 7480 7947 . + 0 ID=cds-WP_032230809.1;Parent=gene-AB69_RS20595;Dbxref=GenBank:WP_032230809.1;Name=WP_032230809.1;gbkey=CDS;gene=yfjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417125.1;locus_tag=AB69_RS20595;product=protein YfjT;protein_id=WP_032230809.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 8671 9615 . + . ID=gene-AB69_RS20590;Name=AB69_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20590;old_locus_tag=AB69_0288 NZ_JHDO01000054.1 Protein Homology CDS 8671 9615 . + 0 ID=cds-WP_032230811.1;Parent=gene-AB69_RS20590;Dbxref=GenBank:WP_032230811.1;Name=WP_032230811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742131.1;locus_tag=AB69_RS20590;product=hypothetical protein;protein_id=WP_032230811.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 9934 11118 . + . ID=gene-AB69_RS20585;Name=AB69_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20585;old_locus_tag=AB69_0289 NZ_JHDO01000054.1 Protein Homology CDS 9934 11118 . + 0 ID=cds-WP_032230812.1;Parent=gene-AB69_RS20585;Dbxref=GenBank:WP_032230812.1;Name=WP_032230812.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181755.1;locus_tag=AB69_RS20585;product=MFS transporter;protein_id=WP_032230812.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 11145 11837 . + . ID=gene-AB69_RS20580;Name=AB69_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20580;old_locus_tag=AB69_0290 NZ_JHDO01000054.1 Protein Homology CDS 11145 11837 . + 0 ID=cds-WP_032230813.1;Parent=gene-AB69_RS20580;Dbxref=GenBank:WP_032230813.1;Name=WP_032230813.1;Ontology_term=GO:0006751,GO:0061928;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916403.1;locus_tag=AB69_RS20580;product=gamma-glutamylcyclotransferase;protein_id=WP_032230813.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 11834 12715 . + . ID=gene-AB69_RS20575;Name=AB69_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20575;old_locus_tag=AB69_0291 NZ_JHDO01000054.1 Protein Homology CDS 11834 12715 . + 0 ID=cds-WP_032230814.1;Parent=gene-AB69_RS20575;Dbxref=GenBank:WP_032230814.1;Name=WP_032230814.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722115.1;locus_tag=AB69_RS20575;product=LysR family transcriptional regulator;protein_id=WP_032230814.1;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 13018 13110 . + . ID=gene-AB69_RS30685;Name=AB69_RS30685;end_range=13110,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30685;partial=true;pseudo=true;start_range=.,13018 NZ_JHDO01000054.1 Protein Homology CDS 13018 13110 . + 0 ID=cds-AB69_RS30685;Parent=gene-AB69_RS30685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=13110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194654.1;locus_tag=AB69_RS30685;partial=true;product=DUF905 family protein;pseudo=true;start_range=.,13018;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 13223 13546 . + . ID=gene-AB69_RS29190;Name=AB69_RS29190;end_range=13546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29190;old_locus_tag=AB69_0292;partial=true;pseudo=true NZ_JHDO01000054.1 Protein Homology CDS 13223 13546 . + 0 ID=cds-AB69_RS29190;Parent=gene-AB69_RS29190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783821.1;locus_tag=AB69_RS29190;partial=true;product=antirestriction protein;pseudo=true;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 13621 13989 . + . ID=gene-AB69_RS26290;Name=AB69_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26290;old_locus_tag=AB69_0293 NZ_JHDO01000054.1 Protein Homology CDS 13621 13989 . + 0 ID=cds-WP_071996064.1;Parent=gene-AB69_RS26290;Dbxref=GenBank:WP_071996064.1;Name=WP_071996064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818667.1;locus_tag=AB69_RS26290;product=TA system toxin CbtA family protein;protein_id=WP_071996064.1;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 14310 14648 . - . ID=gene-AB69_RS0123515;Name=AB69_RS0123515;end_range=14648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123515;partial=true;pseudo=true NZ_JHDO01000054.1 Protein Homology CDS 14310 14648 . - 0 ID=cds-AB69_RS0123515;Parent=gene-AB69_RS0123515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308332.2;locus_tag=AB69_RS0123515;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 14699 15655 . - . ID=gene-AB69_RS20565;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=AB69_RS20565;old_locus_tag=AB69_0295 NZ_JHDO01000054.1 Protein Homology CDS 14699 15655 . - 0 ID=cds-WP_000121359.1;Parent=gene-AB69_RS20565;Dbxref=GenBank:WP_000121359.1;Name=WP_000121359.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=AB69_RS20565;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_000121359.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 15665 17863 . - . ID=gene-AB69_RS20560;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;locus_tag=AB69_RS20560;old_locus_tag=AB69_0296 NZ_JHDO01000054.1 Protein Homology CDS 15665 17863 . - 0 ID=cds-WP_000667026.1;Parent=gene-AB69_RS20560;Dbxref=GenBank:WP_000667026.1;Name=WP_000667026.1;gbkey=CDS;gene=paoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=AB69_RS20560;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_000667026.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 17860 18816 . - . ID=gene-AB69_RS20555;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;locus_tag=AB69_RS20555;old_locus_tag=AB69_0297 NZ_JHDO01000054.1 Protein Homology CDS 17860 18816 . - 0 ID=cds-WP_000643333.1;Parent=gene-AB69_RS20555;Dbxref=GenBank:WP_000643333.1;Name=WP_000643333.1;gbkey=CDS;gene=paoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=AB69_RS20555;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643333.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 18813 19502 . - . ID=gene-AB69_RS20550;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=AB69_RS20550;old_locus_tag=AB69_0298 NZ_JHDO01000054.1 Protein Homology CDS 18813 19502 . - 0 ID=cds-WP_000070700.1;Parent=gene-AB69_RS20550;Dbxref=GenBank:WP_000070700.1;Name=WP_000070700.1;Ontology_term=GO:0046872,GO:0047770,GO:0051536;gbkey=CDS;gene=paoA;go_function=metal ion binding|0046872||IEA,carboxylate reductase activity|0047770||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=AB69_RS20550;product=aldehyde dehydrogenase iron-sulfur subunit PaoA;protein_id=WP_000070700.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 19920 20534 . + . ID=gene-AB69_RS20545;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=protein_coding;locus_tag=AB69_RS20545;old_locus_tag=AB69_0300 NZ_JHDO01000054.1 Protein Homology CDS 19920 20534 . + 0 ID=cds-WP_001019920.1;Parent=gene-AB69_RS20545;Dbxref=GenBank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;gene=yagU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=AB69_RS20545;product=YagU family protein;protein_id=WP_001019920.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 20782 21111 . - . ID=gene-AB69_RS0123520;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;locus_tag=AB69_RS0123520 NZ_JHDO01000054.1 Protein Homology CDS 20782 21111 . - 0 ID=cds-WP_001303809.1;Parent=gene-AB69_RS0123520;Dbxref=GenBank:WP_001303809.1;Name=WP_001303809.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;gene=ykgJ;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=AB69_RS0123520;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 21424 22134 . - . ID=gene-AB69_RS20540;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;locus_tag=AB69_RS20540;old_locus_tag=AB69_0302 NZ_JHDO01000054.1 Protein Homology CDS 21424 22134 . - 0 ID=cds-WP_001350485.1;Parent=gene-AB69_RS20540;Dbxref=GenBank:WP_001350485.1;Name=WP_001350485.1;gbkey=CDS;gene=ecpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=AB69_RS20540;product=fimbrial chaperone EcpE;protein_id=WP_001350485.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 22103 23746 . - . ID=gene-AB69_RS20535;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=AB69_RS20535;old_locus_tag=AB69_0303 NZ_JHDO01000054.1 Protein Homology CDS 22103 23746 . - 0 ID=cds-WP_001310578.1;Parent=gene-AB69_RS20535;Dbxref=GenBank:WP_001310578.1;Name=WP_001310578.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=AB69_RS20535;product=fimbrial adhesin EcpD;protein_id=WP_001310578.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 23736 26261 . - . ID=gene-AB69_RS20530;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=yagX;locus_tag=AB69_RS20530;old_locus_tag=AB69_0304 NZ_JHDO01000054.1 Protein Homology CDS 23736 26261 . - 0 ID=cds-WP_001131096.1;Parent=gene-AB69_RS20530;Dbxref=GenBank:WP_001131096.1;Name=WP_001131096.1;gbkey=CDS;gene=ecpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=AB69_RS20530;product=fimbrial usher EcpC;protein_id=WP_001131096.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 26287 26955 . - . ID=gene-AB69_RS20525;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=yagY;locus_tag=AB69_RS20525;old_locus_tag=AB69_0305 NZ_JHDO01000054.1 Protein Homology CDS 26287 26955 . - 0 ID=cds-WP_000716398.1;Parent=gene-AB69_RS20525;Dbxref=GenBank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;gene=ecpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=AB69_RS20525;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 27013 27600 . - . ID=gene-AB69_RS20520;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=AB69_RS20520;old_locus_tag=AB69_0306 NZ_JHDO01000054.1 Protein Homology CDS 27013 27600 . - 0 ID=cds-WP_000730978.1;Parent=gene-AB69_RS20520;Dbxref=GenBank:WP_000730978.1;Name=WP_000730978.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=AB69_RS20520;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_000730978.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 27675 28217 . - . ID=gene-AB69_RS20515;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AB69_RS20515;old_locus_tag=AB69_0307 NZ_JHDO01000054.1 Protein Homology CDS 27675 28217 . - 0 ID=cds-WP_001301257.1;Parent=gene-AB69_RS20515;Dbxref=GenBank:WP_001301257.1;Name=WP_001301257.1;Ontology_term=GO:0006355,GO:1902021,GO:0003677;gbkey=CDS;gene=ecpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of bacterial-type flagellum-dependent cell motility|1902021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AB69_RS20515;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001301257.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 29041 29268 . + . ID=gene-AB69_RS0123525;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=AB69_RS0123525 NZ_JHDO01000054.1 Protein Homology CDS 29041 29268 . + 0 ID=cds-WP_001147279.1;Parent=gene-AB69_RS0123525;Dbxref=GenBank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AB69_RS0123525;product=protein YkgL;protein_id=WP_001147279.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 29303 29443 . - . ID=gene-AB69_RS20510;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AB69_RS20510;old_locus_tag=AB69_0308 NZ_JHDO01000054.1 Protein Homology CDS 29303 29443 . - 0 ID=cds-WP_000866436.1;Parent=gene-AB69_RS20510;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AB69_RS20510;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 29443 29706 . - . ID=gene-AB69_RS20505;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=AB69_RS20505;old_locus_tag=AB69_0309 NZ_JHDO01000054.1 Protein Homology CDS 29443 29706 . - 0 ID=cds-WP_000803998.1;Parent=gene-AB69_RS20505;Dbxref=GenBank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AB69_RS20505;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 30070 30171 . - . ID=gene-AB69_RS30690;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AB69_RS30690 NZ_JHDO01000054.1 Protein Homology CDS 30070 30171 . - 0 ID=cds-WP_000662258.1;Parent=gene-AB69_RS30690;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AB69_RS30690;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 30645 30734 . - . ID=gene-AB69_RS30170;Name=AB69_RS30170;end_range=30734,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30170;partial=true;pseudo=true NZ_JHDO01000054.1 Protein Homology CDS 30645 30734 . - 0 ID=cds-AB69_RS30170;Parent=gene-AB69_RS30170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AB69_RS30170;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 31286 34358 . + . ID=gene-AB69_RS0123535;Name=AB69_RS0123535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123535;pseudo=true NZ_JHDO01000054.1 Protein Homology CDS 31286 34358 . + 0 ID=cds-AB69_RS0123535;Parent=gene-AB69_RS0123535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AB69_RS0123535;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 34498 35349 . - . ID=gene-AB69_RS20500;Name=AB69_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20500;old_locus_tag=AB69_0313 NZ_JHDO01000054.1 Protein Homology CDS 34498 35349 . - 0 ID=cds-WP_000621009.1;Parent=gene-AB69_RS20500;Dbxref=GenBank:WP_000621009.1;Name=WP_000621009.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AB69_RS20500;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JHDO01000054.1 RefSeq pseudogene 35652 35780 . + . ID=gene-AB69_RS29670;Name=AB69_RS29670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29670;partial=true;pseudo=true;start_range=.,35652 NZ_JHDO01000054.1 Protein Homology CDS 35652 35780 . + 0 ID=cds-AB69_RS29670;Parent=gene-AB69_RS29670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AB69_RS29670;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,35652;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 35939 36532 . - . ID=gene-AB69_RS20495;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AB69_RS20495;old_locus_tag=AB69_0314 NZ_JHDO01000054.1 Protein Homology CDS 35939 36532 . - 0 ID=cds-WP_001299021.1;Parent=gene-AB69_RS20495;Dbxref=GenBank:WP_001299021.1;Name=WP_001299021.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AB69_RS20495;product=reactive chlorine species resistance protein RclC;protein_id=WP_001299021.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 36544 36780 . - . ID=gene-AB69_RS20490;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AB69_RS20490;old_locus_tag=AB69_0315 NZ_JHDO01000054.1 Protein Homology CDS 36544 36780 . - 0 ID=cds-WP_000474084.1;Parent=gene-AB69_RS20490;Dbxref=GenBank:WP_000474084.1;Name=WP_000474084.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AB69_RS20490;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474084.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 36889 38214 . - . ID=gene-AB69_RS20485;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AB69_RS20485;old_locus_tag=AB69_0316 NZ_JHDO01000054.1 Protein Homology CDS 36889 38214 . - 0 ID=cds-WP_001046307.1;Parent=gene-AB69_RS20485;Dbxref=GenBank:WP_001046307.1;Name=WP_001046307.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AB69_RS20485;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046307.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 38440 39294 . + . ID=gene-AB69_RS20480;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AB69_RS20480;old_locus_tag=AB69_0317 NZ_JHDO01000054.1 Protein Homology CDS 38440 39294 . + 0 ID=cds-WP_000339594.1;Parent=gene-AB69_RS20480;Dbxref=GenBank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414839.1;locus_tag=AB69_RS20480;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339594.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 39821 40540 . + . ID=gene-AB69_RS20475;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AB69_RS20475;old_locus_tag=AB69_0319 NZ_JHDO01000054.1 Protein Homology CDS 39821 40540 . + 0 ID=cds-WP_001102108.1;Parent=gene-AB69_RS20475;Dbxref=GenBank:WP_001102108.1;Name=WP_001102108.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AB69_RS20475;product=(Fe-S)-binding protein;protein_id=WP_001102108.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 40551 41978 . + . ID=gene-AB69_RS20470;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AB69_RS20470;old_locus_tag=AB69_0320 NZ_JHDO01000054.1 Protein Homology CDS 40551 41978 . + 0 ID=cds-WP_000023927.1;Parent=gene-AB69_RS20470;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AB69_RS20470;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 41971 42666 . + . ID=gene-AB69_RS20465;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AB69_RS20465;old_locus_tag=AB69_0321 NZ_JHDO01000054.1 Protein Homology CDS 41971 42666 . + 0 ID=cds-WP_000370307.1;Parent=gene-AB69_RS20465;Dbxref=GenBank:WP_000370307.1;Name=WP_000370307.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AB69_RS20465;product=LutC/YkgG family protein;protein_id=WP_000370307.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 42909 43577 . - . ID=gene-AB69_RS20460;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AB69_RS20460;old_locus_tag=AB69_0322 NZ_JHDO01000054.1 Protein Homology CDS 42909 43577 . - 0 ID=cds-WP_001209100.1;Parent=gene-AB69_RS20460;Dbxref=GenBank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AB69_RS20460;product=protein YkgH;protein_id=WP_001209100.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 43790 45460 . - . ID=gene-AB69_RS20455;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AB69_RS20455;old_locus_tag=AB69_0323 NZ_JHDO01000054.1 Protein Homology CDS 43790 45460 . - 0 ID=cds-WP_001159094.1;Parent=gene-AB69_RS20455;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AB69_RS20455;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 45474 46946 . - . ID=gene-AB69_RS20450;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AB69_RS20450;old_locus_tag=AB69_0324 NZ_JHDO01000054.1 Protein Homology CDS 45474 46946 . - 0 ID=cds-WP_000089110.1;Parent=gene-AB69_RS20450;Dbxref=GenBank:WP_000089110.1;Name=WP_000089110.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AB69_RS20450;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089110.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 46960 47547 . - . ID=gene-AB69_RS20445;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AB69_RS20445;old_locus_tag=AB69_0325 NZ_JHDO01000054.1 Protein Homology CDS 46960 47547 . - 0 ID=cds-WP_032230818.1;Parent=gene-AB69_RS20445;Dbxref=GenBank:WP_032230818.1;Name=WP_032230818.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AB69_RS20445;product=transcriptional regulator BetI;protein_id=WP_032230818.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 47676 49709 . + . ID=gene-AB69_RS20440;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AB69_RS20440;old_locus_tag=AB69_0326 NZ_JHDO01000054.1 Protein Homology CDS 47676 49709 . + 0 ID=cds-WP_000131044.1;Parent=gene-AB69_RS20440;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AB69_RS20440;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 50015 50089 . + . ID=gene-AB69_RS29675;Name=AB69_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29675 NZ_JHDO01000054.1 Protein Homology CDS 50015 50089 . + 0 ID=cds-WP_120795374.1;Parent=gene-AB69_RS29675;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AB69_RS29675;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JHDO01000054.1 RefSeq gene 50365 50615 . + . ID=gene-AB69_RS20435;Name=AB69_RS20435;end_range=50615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20435;old_locus_tag=AB69_0327;partial=true NZ_JHDO01000054.1 Protein Homology CDS 50365 50615 . + 0 ID=cds-WP_000567707.1;Parent=gene-AB69_RS20435;Dbxref=GenBank:WP_000567707.1;Name=WP_000567707.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=50615,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS20435;partial=true;product=transposase;protein_id=WP_000567707.1;transl_table=11 ##sequence-region NZ_JHDO01000055.1 1 6190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000055.1 RefSeq region 1 6190 . + . ID=NZ_JHDO01000055.1:1..6190;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000055.1 RefSeq pseudogene 492 614 . - . ID=gene-AB69_RS30175;Name=AB69_RS30175;end_range=614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30175;partial=true;pseudo=true NZ_JHDO01000055.1 Protein Homology CDS 492 614 . - 0 ID=cds-AB69_RS30175;Parent=gene-AB69_RS30175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=AB69_RS30175;partial=true;product=phage integrase family protein;pseudo=true;transl_table=11 NZ_JHDO01000055.1 RefSeq pseudogene 1060 1251 . - . ID=gene-AB69_RS0123565;Name=AB69_RS0123565;end_range=1251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123565;partial=true;pseudo=true NZ_JHDO01000055.1 Protein Homology CDS 1060 1251 . - 0 ID=cds-AB69_RS0123565;Parent=gene-AB69_RS0123565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AB69_RS0123565;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000055.1 RefSeq gene 1487 2173 . + . ID=gene-AB69_RS20430;Name=AB69_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20430;old_locus_tag=AB69_0328 NZ_JHDO01000055.1 Protein Homology CDS 1487 2173 . + 0 ID=cds-WP_024180935.1;Parent=gene-AB69_RS20430;Dbxref=GenBank:WP_024180935.1;Name=WP_024180935.1;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388865.1;locus_tag=AB69_RS20430;product=PIG-L deacetylase family protein;protein_id=WP_024180935.1;transl_table=11 NZ_JHDO01000055.1 RefSeq gene 2177 3388 . + . ID=gene-AB69_RS26325;Name=AB69_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26325;old_locus_tag=AB69_0329 NZ_JHDO01000055.1 Protein Homology CDS 2177 3388 . + 0 ID=cds-WP_001700396.1;Parent=gene-AB69_RS26325;Dbxref=GenBank:WP_001700396.1;Name=WP_001700396.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353664.1;locus_tag=AB69_RS26325;product=glycosyltransferase;protein_id=WP_001700396.1;transl_table=11 NZ_JHDO01000055.1 RefSeq gene 3339 3938 . + . ID=gene-AB69_RS0123570;Name=AB69_RS0123570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123570 NZ_JHDO01000055.1 Protein Homology CDS 3339 3938 . + 0 ID=cds-WP_167594799.1;Parent=gene-AB69_RS0123570;Dbxref=GenBank:WP_167594799.1;Name=WP_167594799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142151.1;locus_tag=AB69_RS0123570;product=acetyltransferase;protein_id=WP_167594799.1;transl_table=11 NZ_JHDO01000055.1 RefSeq gene 3938 4720 . + . ID=gene-AB69_RS20425;Name=AB69_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20425;old_locus_tag=AB69_0330 NZ_JHDO01000055.1 Protein Homology CDS 3938 4720 . + 0 ID=cds-WP_024180937.1;Parent=gene-AB69_RS20425;Dbxref=GenBank:WP_024180937.1;Name=WP_024180937.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234584.1;locus_tag=AB69_RS20425;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_024180937.1;transl_table=11 NZ_JHDO01000055.1 RefSeq pseudogene 4866 5024 . - . ID=gene-AB69_RS25705;Name=AB69_RS25705;end_range=5024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS25705;old_locus_tag=AB69_0331;partial=true;pseudo=true NZ_JHDO01000055.1 Protein Homology CDS 4866 5024 . - 0 ID=cds-AB69_RS25705;Parent=gene-AB69_RS25705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=5024,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=AB69_RS25705;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000055.1 RefSeq pseudogene 5053 5715 . - . ID=gene-AB69_RS28355;Name=AB69_RS28355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28355;partial=true;pseudo=true;start_range=.,5053 NZ_JHDO01000055.1 Protein Homology CDS 5053 5715 . - 0 ID=cds-AB69_RS28355;Parent=gene-AB69_RS28355;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=AB69_RS28355;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,5053;transl_table=11 NZ_JHDO01000055.1 RefSeq gene 5832 6190 . - . ID=gene-AB69_RS20410;Name=AB69_RS20410;end_range=6190,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20410;old_locus_tag=AB69_0335;partial=true NZ_JHDO01000055.1 Protein Homology CDS 5832 6190 . - 2 ID=cds-WP_248785134.1;Parent=gene-AB69_RS20410;Dbxref=GenBank:WP_248785134.1;Name=WP_248785134.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6190,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS20410;partial=true;product=IS1 family transposase;protein_id=WP_248785134.1;transl_table=11 ##sequence-region NZ_JHDO01000056.1 1 20016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000056.1 RefSeq region 1 20016 . + . ID=NZ_JHDO01000056.1:1..20016;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000056.1 RefSeq gene 1 296 . + . ID=gene-AB69_RS20405;Name=AB69_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20405;old_locus_tag=AB69_0336;partial=true;start_range=.,1 NZ_JHDO01000056.1 Protein Homology CDS 1 296 . + 2 ID=cds-WP_032235674.1;Parent=gene-AB69_RS20405;Dbxref=GenBank:WP_032235674.1;Name=WP_032235674.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976766.1;locus_tag=AB69_RS20405;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235674.1;start_range=.,1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 623 1711 . + . ID=gene-AB69_RS20400;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AB69_RS20400;old_locus_tag=AB69_0337 NZ_JHDO01000056.1 Protein Homology CDS 623 1711 . + 0 ID=cds-WP_001301264.1;Parent=gene-AB69_RS20400;Dbxref=GenBank:WP_001301264.1;Name=WP_001301264.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AB69_RS20400;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001301264.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 1753 2685 . - . ID=gene-AB69_RS20395;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AB69_RS20395;old_locus_tag=AB69_0338 NZ_JHDO01000056.1 Protein Homology CDS 1753 2685 . - 0 ID=cds-WP_001084399.1;Parent=gene-AB69_RS20395;Dbxref=GenBank:WP_001084399.1;Name=WP_001084399.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AB69_RS20395;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084399.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 2777 3274 . - . ID=gene-AB69_RS20390;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=AB69_RS20390;old_locus_tag=AB69_0339 NZ_JHDO01000056.1 Protein Homology CDS 2777 3274 . - 0 ID=cds-WP_001013892.1;Parent=gene-AB69_RS20390;Dbxref=GenBank:WP_001013892.1;Name=WP_001013892.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yahC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AB69_RS20390;product=DUF1097 domain-containing protein;protein_id=WP_001013892.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 3532 4137 . + . ID=gene-AB69_RS20385;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AB69_RS20385;old_locus_tag=AB69_0340 NZ_JHDO01000056.1 Protein Homology CDS 3532 4137 . + 0 ID=cds-WP_000023635.1;Parent=gene-AB69_RS20385;Dbxref=GenBank:WP_000023635.1;Name=WP_000023635.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AB69_RS20385;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 4177 5040 . + . ID=gene-AB69_RS20380;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AB69_RS20380;old_locus_tag=AB69_0341 NZ_JHDO01000056.1 Protein Homology CDS 4177 5040 . + 0 ID=cds-WP_032230834.1;Parent=gene-AB69_RS20380;Dbxref=GenBank:WP_032230834.1;Name=WP_032230834.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AB69_RS20380;product=DUF2877 domain-containing protein;protein_id=WP_032230834.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 5030 6577 . + . ID=gene-AB69_RS20375;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB69_RS20375;old_locus_tag=AB69_0342 NZ_JHDO01000056.1 Protein Homology CDS 5030 6577 . + 0 ID=cds-WP_000111836.1;Parent=gene-AB69_RS20375;Dbxref=GenBank:WP_000111836.1;Name=WP_000111836.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AB69_RS20375;product=acyl-CoA synthetase FdrA;protein_id=WP_000111836.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 6577 7995 . + . ID=gene-AB69_RS20370;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AB69_RS20370;old_locus_tag=AB69_0343 NZ_JHDO01000056.1 Protein Homology CDS 6577 7995 . + 0 ID=cds-WP_000083429.1;Parent=gene-AB69_RS20370;Dbxref=GenBank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AB69_RS20370;product=DUF1116 domain-containing protein;protein_id=WP_000083429.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 8045 8341 . + . ID=gene-AB69_RS20365;Name=yahH;gbkey=Gene;gene=yahH;gene_biotype=protein_coding;locus_tag=AB69_RS20365;old_locus_tag=AB69_0344 NZ_JHDO01000056.1 GeneMarkS-2+ CDS 8045 8341 . + 0 ID=cds-WP_001295687.1;Parent=gene-AB69_RS20365;Dbxref=GenBank:WP_001295687.1;Name=WP_001295687.1;gbkey=CDS;gene=yahH;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS20365;product=protein YahH;protein_id=WP_001295687.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 8417 9367 . + . ID=gene-AB69_RS20360;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AB69_RS20360;old_locus_tag=AB69_0345 NZ_JHDO01000056.1 Protein Homology CDS 8417 9367 . + 0 ID=cds-WP_000661672.1;Parent=gene-AB69_RS20360;Dbxref=GenBank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AB69_RS20360;product=carbamate kinase family protein;protein_id=WP_000661672.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 9377 10759 . + . ID=gene-AB69_RS20355;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AB69_RS20355;old_locus_tag=AB69_0346 NZ_JHDO01000056.1 Protein Homology CDS 9377 10759 . + 0 ID=cds-WP_000665120.1;Parent=gene-AB69_RS20355;Dbxref=GenBank:WP_000665120.1;Name=WP_000665120.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AB69_RS20355;product=amidohydrolase family protein;protein_id=WP_000665120.1;transl_table=11 NZ_JHDO01000056.1 RefSeq pseudogene 10975 11049 . + . ID=gene-AB69_RS30180;Name=AB69_RS30180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30180;partial=true;pseudo=true;start_range=.,10975 NZ_JHDO01000056.1 Protein Homology CDS 10975 11049 . + 0 ID=cds-AB69_RS30180;Parent=gene-AB69_RS30180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AB69_RS30180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10975;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 11136 12185 . + . ID=gene-AB69_RS20350;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AB69_RS20350;old_locus_tag=AB69_0347 NZ_JHDO01000056.1 Protein Homology CDS 11136 12185 . + 0 ID=cds-WP_000692754.1;Parent=gene-AB69_RS20350;Dbxref=GenBank:WP_000692754.1;Name=WP_000692754.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AB69_RS20350;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692754.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 12428 13243 . + . ID=gene-AB69_RS20345;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AB69_RS20345;old_locus_tag=AB69_0348 NZ_JHDO01000056.1 Protein Homology CDS 12428 13243 . + 0 ID=cds-WP_001301260.1;Parent=gene-AB69_RS20345;Dbxref=GenBank:WP_001301260.1;Name=WP_001301260.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=AB69_RS20345;product=protein YahL;protein_id=WP_001301260.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 13656 13901 . + . ID=gene-AB69_RS0123575;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AB69_RS0123575 NZ_JHDO01000056.1 Protein Homology CDS 13656 13901 . + 0 ID=cds-WP_000290616.1;Parent=gene-AB69_RS0123575;Dbxref=GenBank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AB69_RS0123575;product=protein YahM;protein_id=WP_000290616.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 13918 14589 . - . ID=gene-AB69_RS20340;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AB69_RS20340;old_locus_tag=AB69_0351 NZ_JHDO01000056.1 Protein Homology CDS 13918 14589 . - 0 ID=cds-WP_074528849.1;Parent=gene-AB69_RS20340;Dbxref=GenBank:WP_074528849.1;Name=WP_074528849.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AB69_RS20340;product=LysE family transporter;protein_id=WP_074528849.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 14736 15011 . + . ID=gene-AB69_RS20335;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AB69_RS20335;old_locus_tag=AB69_0352 NZ_JHDO01000056.1 Protein Homology CDS 14736 15011 . + 0 ID=cds-WP_000691956.1;Parent=gene-AB69_RS20335;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AB69_RS20335;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 15109 16695 . - . ID=gene-AB69_RS20330;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AB69_RS20330;old_locus_tag=AB69_0354 NZ_JHDO01000056.1 Protein Homology CDS 15109 16695 . - 0 ID=cds-WP_000941041.1;Parent=gene-AB69_RS20330;Dbxref=GenBank:WP_000941041.1;Name=WP_000941041.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AB69_RS20330;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941041.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 16934 17824 . + . ID=gene-AB69_RS20325;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AB69_RS20325;old_locus_tag=AB69_0355 NZ_JHDO01000056.1 Protein Homology CDS 16934 17824 . + 0 ID=cds-WP_000052206.1;Parent=gene-AB69_RS20325;Dbxref=GenBank:WP_000052206.1;Name=WP_000052206.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AB69_RS20325;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_JHDO01000056.1 RefSeq gene 18450 19619 . + . ID=gene-AB69_RS20320;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AB69_RS20320;old_locus_tag=AB69_0356 NZ_JHDO01000056.1 Protein Homology CDS 18450 19619 . + 0 ID=cds-WP_001285927.1;Parent=gene-AB69_RS20320;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AB69_RS20320;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JHDO01000056.1 RefSeq pseudogene 19653 20016 . + . ID=gene-AB69_RS20315;Name=AB69_RS20315;end_range=20016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20315;old_locus_tag=AB69_0357;partial=true;pseudo=true NZ_JHDO01000056.1 Protein Homology CDS 19653 20016 . + 0 ID=cds-AB69_RS20315;Parent=gene-AB69_RS20315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=20016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308414.1;locus_tag=AB69_RS20315;partial=true;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000057.1 1 31842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000057.1 RefSeq region 1 31842 . + . ID=NZ_JHDO01000057.1:1..31842;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000057.1 RefSeq gene 62 1231 . + . ID=gene-AB69_RS20310;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AB69_RS20310;old_locus_tag=AB69_0358 NZ_JHDO01000057.1 Protein Homology CDS 62 1231 . + 0 ID=cds-WP_001285927.1-2;Parent=gene-AB69_RS20310;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AB69_RS20310;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 1265 2716 . + . ID=gene-AB69_RS20305;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AB69_RS20305;old_locus_tag=AB69_0359 NZ_JHDO01000057.1 Protein Homology CDS 1265 2716 . + 0 ID=cds-WP_001275859.1;Parent=gene-AB69_RS20305;Dbxref=GenBank:WP_001275859.1;Name=WP_001275859.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AB69_RS20305;product=2-methylcitrate dehydratase;protein_id=WP_001275859.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 2756 4642 . + . ID=gene-AB69_RS20300;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AB69_RS20300;old_locus_tag=AB69_0360 NZ_JHDO01000057.1 Protein Homology CDS 2756 4642 . + 0 ID=cds-WP_000010285.1;Parent=gene-AB69_RS20300;Dbxref=GenBank:WP_000010285.1;Name=WP_000010285.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414869.1;locus_tag=AB69_RS20300;product=propionate--CoA ligase;protein_id=WP_000010285.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 4972 6231 . + . ID=gene-AB69_RS20295;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AB69_RS20295;old_locus_tag=AB69_0361 NZ_JHDO01000057.1 Protein Homology CDS 4972 6231 . + 0 ID=cds-WP_000076233.1;Parent=gene-AB69_RS20295;Dbxref=GenBank:WP_000076233.1;Name=WP_000076233.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AB69_RS20295;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 6221 7504 . + . ID=gene-AB69_RS20290;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AB69_RS20290;old_locus_tag=AB69_0362 NZ_JHDO01000057.1 Protein Homology CDS 6221 7504 . + 0 ID=cds-WP_001301240.1;Parent=gene-AB69_RS20290;Dbxref=GenBank:WP_001301240.1;Name=WP_001301240.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AB69_RS20290;product=cytosine/isoguanine deaminase;protein_id=WP_001301240.1;transl_table=11 NZ_JHDO01000057.1 RefSeq pseudogene 7641 7724 . - . ID=gene-AB69_RS30785;Name=AB69_RS30785;end_range=7724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30785;partial=true;pseudo=true NZ_JHDO01000057.1 Protein Homology CDS 7641 7724 . - 0 ID=cds-AB69_RS30785;Parent=gene-AB69_RS30785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AB69_RS30785;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000057.1 RefSeq pseudogene 7841 7924 . - . ID=gene-AB69_RS30790;Name=AB69_RS30790;end_range=7924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30790;partial=true;pseudo=true NZ_JHDO01000057.1 Protein Homology CDS 7841 7924 . - 0 ID=cds-AB69_RS30790;Parent=gene-AB69_RS30790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AB69_RS30790;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 8041 8940 . - . ID=gene-AB69_RS20285;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AB69_RS20285;old_locus_tag=AB69_0363 NZ_JHDO01000057.1 Protein Homology CDS 8041 8940 . - 0 ID=cds-WP_000952503.1;Parent=gene-AB69_RS20285;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AB69_RS20285;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 9049 9708 . + . ID=gene-AB69_RS20280;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AB69_RS20280;old_locus_tag=AB69_0364 NZ_JHDO01000057.1 Protein Homology CDS 9049 9708 . + 0 ID=cds-WP_000658652.1;Parent=gene-AB69_RS20280;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AB69_RS20280;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 9739 10209 . + . ID=gene-AB69_RS20275;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AB69_RS20275;old_locus_tag=AB69_0365 NZ_JHDO01000057.1 Protein Homology CDS 9739 10209 . + 0 ID=cds-WP_000616243.1;Parent=gene-AB69_RS20275;Dbxref=GenBank:WP_000616243.1;Name=WP_000616243.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AB69_RS20275;product=cyanase;protein_id=WP_000616243.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 10215 11396 . + . ID=gene-AB69_RS20270;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AB69_RS20270;old_locus_tag=AB69_0366 NZ_JHDO01000057.1 Protein Homology CDS 10215 11396 . + 0 ID=cds-WP_001301263.1;Parent=gene-AB69_RS20270;Dbxref=GenBank:WP_001301263.1;Name=WP_001301263.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AB69_RS20270;product=cyanate transporter CynX;protein_id=WP_001301263.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 11499 12110 . - . ID=gene-AB69_RS20265;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AB69_RS20265;old_locus_tag=AB69_0367 NZ_JHDO01000057.1 Protein Homology CDS 11499 12110 . - 0 ID=cds-WP_032230843.1;Parent=gene-AB69_RS20265;Dbxref=GenBank:WP_032230843.1;Name=WP_032230843.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AB69_RS20265;product=galactoside O-acetyltransferase;protein_id=WP_032230843.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 12176 13429 . - . ID=gene-AB69_RS20260;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AB69_RS20260;old_locus_tag=AB69_0368 NZ_JHDO01000057.1 Protein Homology CDS 12176 13429 . - 0 ID=cds-WP_032230840.1;Parent=gene-AB69_RS20260;Dbxref=GenBank:WP_032230840.1;Name=WP_032230840.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AB69_RS20260;product=lactose permease;protein_id=WP_032230840.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 13481 16555 . - . ID=gene-AB69_RS20255;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AB69_RS20255;old_locus_tag=AB69_0369 NZ_JHDO01000057.1 Protein Homology CDS 13481 16555 . - 0 ID=cds-WP_032230842.1;Parent=gene-AB69_RS20255;Dbxref=GenBank:WP_032230842.1;Name=WP_032230842.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AB69_RS20255;product=beta-galactosidase;protein_id=WP_032230842.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 16678 17760 . - . ID=gene-AB69_RS20250;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AB69_RS20250;old_locus_tag=AB69_0370 NZ_JHDO01000057.1 Protein Homology CDS 16678 17760 . - 0 ID=cds-WP_000805902.1;Parent=gene-AB69_RS20250;Dbxref=GenBank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AB69_RS20250;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 17837 18670 . - . ID=gene-AB69_RS20245;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AB69_RS20245;old_locus_tag=AB69_0371 NZ_JHDO01000057.1 Protein Homology CDS 17837 18670 . - 0 ID=cds-WP_001301325.1;Parent=gene-AB69_RS20245;Dbxref=GenBank:WP_001301325.1;Name=WP_001301325.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AB69_RS20245;product=DNA-binding transcriptional regulator;protein_id=WP_001301325.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 18861 20525 . + . ID=gene-AB69_RS20240;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AB69_RS20240;old_locus_tag=AB69_0372 NZ_JHDO01000057.1 Protein Homology CDS 18861 20525 . + 0 ID=cds-WP_001007407.1;Parent=gene-AB69_RS20240;Dbxref=GenBank:WP_001007407.1;Name=WP_001007407.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414881.1;locus_tag=AB69_RS20240;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007407.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 20527 21471 . + . ID=gene-AB69_RS20235;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AB69_RS20235;old_locus_tag=AB69_0373 NZ_JHDO01000057.1 Protein Homology CDS 20527 21471 . + 0 ID=cds-WP_000543457.1;Parent=gene-AB69_RS20235;Dbxref=GenBank:WP_000543457.1;Name=WP_000543457.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AB69_RS20235;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543457.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 21489 22355 . + . ID=gene-AB69_RS20230;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AB69_RS20230;old_locus_tag=AB69_0374 NZ_JHDO01000057.1 Protein Homology CDS 21489 22355 . + 0 ID=cds-WP_000121907.1;Parent=gene-AB69_RS20230;Dbxref=GenBank:WP_000121907.1;Name=WP_000121907.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AB69_RS20230;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121907.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 22365 23174 . + . ID=gene-AB69_RS20225;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AB69_RS20225;old_locus_tag=AB69_0375 NZ_JHDO01000057.1 Protein Homology CDS 22365 23174 . + 0 ID=cds-WP_000160710.1;Parent=gene-AB69_RS20225;Dbxref=GenBank:WP_000160710.1;Name=WP_000160710.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AB69_RS20225;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160710.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 23171 24121 . + . ID=gene-AB69_RS20220;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AB69_RS20220;old_locus_tag=AB69_0376 NZ_JHDO01000057.1 Protein Homology CDS 23171 24121 . + 0 ID=cds-WP_000044314.1;Parent=gene-AB69_RS20220;Dbxref=GenBank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AB69_RS20220;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 24118 25131 . + . ID=gene-AB69_RS20215;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AB69_RS20215;old_locus_tag=AB69_0377 NZ_JHDO01000057.1 Protein Homology CDS 24118 25131 . + 0 ID=cds-WP_001013499.1;Parent=gene-AB69_RS20215;Dbxref=GenBank:WP_001013499.1;Name=WP_001013499.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AB69_RS20215;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 25709 26920 . + . ID=gene-AB69_RS20210;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AB69_RS20210;old_locus_tag=AB69_0378 NZ_JHDO01000057.1 Protein Homology CDS 25709 26920 . + 0 ID=cds-WP_000107627.1;Parent=gene-AB69_RS20210;Dbxref=GenBank:WP_000107627.1;Name=WP_000107627.1;gbkey=CDS;gene=mhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414887.2;locus_tag=AB69_RS20210;product=3-(3-hydroxy-phenyl)propionate transporter;protein_id=WP_000107627.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 27022 27561 . + . ID=gene-AB69_RS20205;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AB69_RS20205;old_locus_tag=AB69_0379 NZ_JHDO01000057.1 Protein Homology CDS 27022 27561 . + 0 ID=cds-WP_001096705.1;Parent=gene-AB69_RS20205;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AB69_RS20205;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 27785 28618 . - . ID=gene-AB69_RS20200;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AB69_RS20200;old_locus_tag=AB69_0380 NZ_JHDO01000057.1 Protein Homology CDS 27785 28618 . - 0 ID=cds-WP_000419083.1;Parent=gene-AB69_RS20200;Dbxref=GenBank:WP_000419083.1;Name=WP_000419083.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AB69_RS20200;product=S-formylglutathione hydrolase;protein_id=WP_000419083.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 28712 29821 . - . ID=gene-AB69_RS20195;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AB69_RS20195;old_locus_tag=AB69_0381 NZ_JHDO01000057.1 Protein Homology CDS 28712 29821 . - 0 ID=cds-WP_000842100.1;Parent=gene-AB69_RS20195;Dbxref=GenBank:WP_000842100.1;Name=WP_000842100.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AB69_RS20195;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842100.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 29856 30131 . - . ID=gene-AB69_RS20190;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AB69_RS20190;old_locus_tag=AB69_0382 NZ_JHDO01000057.1 Protein Homology CDS 29856 30131 . - 0 ID=cds-WP_001141271.1;Parent=gene-AB69_RS20190;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AB69_RS20190;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JHDO01000057.1 RefSeq gene 30320 31093 . - . ID=gene-AB69_RS20185;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AB69_RS20185;old_locus_tag=AB69_0383 NZ_JHDO01000057.1 Protein Homology CDS 30320 31093 . - 0 ID=cds-WP_000596084.1;Parent=gene-AB69_RS20185;Dbxref=GenBank:WP_000596084.1;Name=WP_000596084.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AB69_RS20185;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000596084.1;transl_table=11 NZ_JHDO01000057.1 RefSeq pseudogene 31095 31244 . - . ID=gene-AB69_RS26380;Name=AB69_RS26380;end_range=31244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26380;partial=true;pseudo=true NZ_JHDO01000057.1 Protein Homology CDS 31095 31244 . - 0 ID=cds-AB69_RS26380;Parent=gene-AB69_RS26380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=31244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231914.1;locus_tag=AB69_RS26380;partial=true;product=transferase;pseudo=true;transl_table=11 NZ_JHDO01000057.1 RefSeq pseudogene 31290 31842 . + . ID=gene-AB69_RS28365;Name=AB69_RS28365;end_range=31842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28365;partial=true;pseudo=true NZ_JHDO01000057.1 Protein Homology CDS 31290 31842 . + 0 ID=cds-AB69_RS28365;Parent=gene-AB69_RS28365;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31842,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28365;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000058.1 1 143344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000058.1 RefSeq region 1 143344 . + . ID=NZ_JHDO01000058.1:1..143344;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000058.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS20175;Name=AB69_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20175;old_locus_tag=AB69_0385 NZ_JHDO01000058.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1;Parent=gene-AB69_RS20175;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS20175;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000058.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1;Parent=gene-AB69_RS20175;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS20175;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000058.1 RefSeq pseudogene 762 1211 . - . ID=gene-AB69_RS20170;Name=AB69_RS20170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20170;old_locus_tag=AB69_0386;partial=true;pseudo=true;start_range=.,762 NZ_JHDO01000058.1 Protein Homology CDS 762 1211 . - 0 ID=cds-AB69_RS20170;Parent=gene-AB69_RS20170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602184.1;locus_tag=AB69_RS20170;partial=true;product=acetyltransferase;pseudo=true;start_range=.,762;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 1189 2385 . - . ID=gene-AB69_RS20165;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AB69_RS20165;old_locus_tag=AB69_0387 NZ_JHDO01000058.1 Protein Homology CDS 1189 2385 . - 0 ID=cds-WP_000860444.1;Parent=gene-AB69_RS20165;Dbxref=GenBank:WP_000860444.1;Name=WP_000860444.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AB69_RS20165;product=glycosyltransferase;protein_id=WP_000860444.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 2410 2529 . + . ID=gene-AB69_RS30795;Name=AB69_RS30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30795 NZ_JHDO01000058.1 Protein Homology CDS 2410 2529 . + 0 ID=cds-WP_120795375.1;Parent=gene-AB69_RS30795;Dbxref=GenBank:WP_120795375.1;Name=WP_120795375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AB69_RS30795;product=protein YkiC;protein_id=WP_120795375.1;transl_table=11 NZ_JHDO01000058.1 RefSeq pseudogene 2656 3066 . - . ID=gene-AB69_RS30800;Name=AB69_RS30800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30800;partial=true;pseudo=true;start_range=.,2656 NZ_JHDO01000058.1 Protein Homology CDS 2656 3066 . - 0 ID=cds-AB69_RS30800;Parent=gene-AB69_RS30800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AB69_RS30800;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,2656;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 3682 4644 . + . ID=gene-AB69_RS20155;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AB69_RS20155;old_locus_tag=AB69_0390 NZ_JHDO01000058.1 Protein Homology CDS 3682 4644 . + 0 ID=cds-WP_001018417.1;Parent=gene-AB69_RS20155;Dbxref=GenBank:WP_001018417.1;Name=WP_001018417.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AB69_RS20155;product=taurine ABC transporter substrate-binding protein;protein_id=WP_001018417.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 4657 5424 . + . ID=gene-AB69_RS20150;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AB69_RS20150;old_locus_tag=AB69_0391 NZ_JHDO01000058.1 Protein Homology CDS 4657 5424 . + 0 ID=cds-WP_000939375.1;Parent=gene-AB69_RS20150;Dbxref=GenBank:WP_000939375.1;Name=WP_000939375.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414900.1;locus_tag=AB69_RS20150;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939375.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 5421 6248 . + . ID=gene-AB69_RS20145;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AB69_RS20145;old_locus_tag=AB69_0392 NZ_JHDO01000058.1 Protein Homology CDS 5421 6248 . + 0 ID=cds-WP_000114620.1;Parent=gene-AB69_RS20145;Dbxref=GenBank:WP_000114620.1;Name=WP_000114620.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414901.1;locus_tag=AB69_RS20145;product=taurine ABC transporter permease TauC;protein_id=WP_000114620.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 6245 7096 . + . ID=gene-AB69_RS20140;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AB69_RS20140;old_locus_tag=AB69_0393 NZ_JHDO01000058.1 Protein Homology CDS 6245 7096 . + 0 ID=cds-WP_000004027.1;Parent=gene-AB69_RS20140;Dbxref=GenBank:WP_000004027.1;Name=WP_000004027.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414902.1;locus_tag=AB69_RS20140;product=taurine dioxygenase;protein_id=WP_000004027.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 7203 8177 . - . ID=gene-AB69_RS20135;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AB69_RS20135;old_locus_tag=AB69_0394 NZ_JHDO01000058.1 Protein Homology CDS 7203 8177 . - 0 ID=cds-WP_001295337.1;Parent=gene-AB69_RS20135;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AB69_RS20135;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 8701 11607 . + . ID=gene-AB69_RS20130;Name=AB69_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20130;old_locus_tag=AB69_0396 NZ_JHDO01000058.1 Protein Homology CDS 8701 11607 . + 0 ID=cds-WP_000556441.1;Parent=gene-AB69_RS20130;Dbxref=GenBank:WP_000556441.1;Name=WP_000556441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=AB69_RS20130;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556441.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 11695 12318 . + . ID=gene-AB69_RS20125;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AB69_RS20125;old_locus_tag=AB69_0397 NZ_JHDO01000058.1 Protein Homology CDS 11695 12318 . + 0 ID=cds-WP_001295335.1;Parent=gene-AB69_RS20125;Dbxref=GenBank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AB69_RS20125;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295335.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 12319 13476 . - . ID=gene-AB69_RS20120;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AB69_RS20120;old_locus_tag=AB69_0398 NZ_JHDO01000058.1 Protein Homology CDS 12319 13476 . - 0 ID=cds-WP_000830741.1;Parent=gene-AB69_RS20120;Dbxref=GenBank:WP_000830741.1;Name=WP_000830741.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AB69_RS20120;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830741.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 13828 15048 . + . ID=gene-AB69_RS20110;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AB69_RS20110;old_locus_tag=AB69_0400 NZ_JHDO01000058.1 Protein Homology CDS 13828 15048 . + 0 ID=cds-WP_001301663.1;Parent=gene-AB69_RS20110;Dbxref=GenBank:WP_001301663.1;Name=WP_001301663.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308454.1;locus_tag=AB69_RS20110;product=peptide antibiotic transporter SbmA;protein_id=WP_001301663.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 15061 16155 . + . ID=gene-AB69_RS20105;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AB69_RS20105;old_locus_tag=AB69_0401 NZ_JHDO01000058.1 Protein Homology CDS 15061 16155 . + 0 ID=cds-WP_000092067.1;Parent=gene-AB69_RS20105;Dbxref=GenBank:WP_000092067.1;Name=WP_000092067.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414912.1;locus_tag=AB69_RS20105;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092067.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 16214 16522 . - . ID=gene-AB69_RS20100;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AB69_RS20100;old_locus_tag=AB69_0402 NZ_JHDO01000058.1 Protein Homology CDS 16214 16522 . - 0 ID=cds-WP_000763151.1;Parent=gene-AB69_RS20100;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AB69_RS20100;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 16782 16994 . + . ID=gene-AB69_RS29200;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AB69_RS29200;old_locus_tag=AB69_0403 NZ_JHDO01000058.1 Protein Homology CDS 16782 16994 . + 0 ID=cds-WP_001295334.1;Parent=gene-AB69_RS29200;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AB69_RS29200;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 17018 18112 . - . ID=gene-AB69_RS20090;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AB69_RS20090;old_locus_tag=AB69_0404 NZ_JHDO01000058.1 Protein Homology CDS 17018 18112 . - 0 ID=cds-WP_000413677.1;Parent=gene-AB69_RS20090;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AB69_RS20090;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 18190 18393 . + . ID=gene-AB69_RS20085;Name=AB69_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS20085;old_locus_tag=AB69_0405 NZ_JHDO01000058.1 Protein Homology CDS 18190 18393 . + 0 ID=cds-WP_001300163.1;Parent=gene-AB69_RS20085;Dbxref=GenBank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AB69_RS20085;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 18575 18835 . + . ID=gene-AB69_RS20080;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AB69_RS20080;old_locus_tag=AB69_0406 NZ_JHDO01000058.1 Protein Homology CDS 18575 18835 . + 0 ID=cds-WP_000792970.1;Parent=gene-AB69_RS20080;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AB69_RS20080;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 18936 20351 . + . ID=gene-AB69_RS20075;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AB69_RS20075;old_locus_tag=AB69_0407 NZ_JHDO01000058.1 Protein Homology CDS 18936 20351 . + 0 ID=cds-WP_000814403.1;Parent=gene-AB69_RS20075;Dbxref=GenBank:WP_000814403.1;Name=WP_000814403.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AB69_RS20075;product=alkaline phosphatase;protein_id=WP_000814403.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 20470 20790 . + . ID=gene-AB69_RS20070;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AB69_RS20070;old_locus_tag=AB69_0408 NZ_JHDO01000058.1 Protein Homology CDS 20470 20790 . + 0 ID=cds-WP_001295332.1;Parent=gene-AB69_RS20070;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AB69_RS20070;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 20892 22007 . + . ID=gene-AB69_RS20065;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AB69_RS20065;old_locus_tag=AB69_0409 NZ_JHDO01000058.1 Protein Homology CDS 20892 22007 . + 0 ID=cds-WP_000484048.1;Parent=gene-AB69_RS20065;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AB69_RS20065;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 22024 22833 . - . ID=gene-AB69_RS20060;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AB69_RS20060;old_locus_tag=AB69_0410 NZ_JHDO01000058.1 Protein Homology CDS 22024 22833 . - 0 ID=cds-WP_001295331.1;Parent=gene-AB69_RS20060;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AB69_RS20060;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 22953 23411 . + . ID=gene-AB69_RS20055;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AB69_RS20055;old_locus_tag=AB69_0411 NZ_JHDO01000058.1 Protein Homology CDS 22953 23411 . + 0 ID=cds-WP_000158159.1;Parent=gene-AB69_RS20055;Dbxref=GenBank:WP_000158159.1;Name=WP_000158159.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414921.2;locus_tag=AB69_RS20055;product=YaiI/YqxD family protein;protein_id=WP_000158159.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 23594 24118 . + . ID=gene-AB69_RS20050;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AB69_RS20050;old_locus_tag=AB69_0412 NZ_JHDO01000058.1 Protein Homology CDS 23594 24118 . + 0 ID=cds-WP_000193393.1;Parent=gene-AB69_RS20050;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AB69_RS20050;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 24168 24359 . + . ID=gene-AB69_RS20045;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AB69_RS20045;old_locus_tag=AB69_0413 NZ_JHDO01000058.1 Protein Homology CDS 24168 24359 . + 0 ID=cds-WP_001142439.1;Parent=gene-AB69_RS20045;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AB69_RS20045;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 24617 25294 . + . ID=gene-AB69_RS20040;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AB69_RS20040;old_locus_tag=AB69_0414 NZ_JHDO01000058.1 Protein Homology CDS 24617 25294 . + 0 ID=cds-WP_001276420.1;Parent=gene-AB69_RS20040;Dbxref=GenBank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AB69_RS20040;product=AroM family protein;protein_id=WP_001276420.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 25366 25650 . + . ID=gene-AB69_RS20035;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AB69_RS20035;old_locus_tag=AB69_0415 NZ_JHDO01000058.1 Protein Homology CDS 25366 25650 . + 0 ID=cds-WP_000941942.1;Parent=gene-AB69_RS20035;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AB69_RS20035;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JHDO01000058.1 RefSeq pseudogene 25798 26139 . + . ID=gene-AB69_RS20030;Name=AB69_RS20030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS20030;old_locus_tag=AB69_0416;partial=true;pseudo=true;start_range=.,25798 NZ_JHDO01000058.1 Protein Homology CDS 25798 26139 . + 0 ID=cds-AB69_RS20030;Parent=gene-AB69_RS20030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AB69_RS20030;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,25798;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 26136 26219 . + . ID=gene-AB69_RS29680;Name=AB69_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29680 NZ_JHDO01000058.1 Protein Homology CDS 26136 26219 . + 0 ID=cds-WP_120795376.1;Parent=gene-AB69_RS29680;Dbxref=GenBank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AB69_RS29680;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 26297 27208 . - . ID=gene-AB69_RS20025;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AB69_RS20025;old_locus_tag=AB69_0417 NZ_JHDO01000058.1 Protein Homology CDS 26297 27208 . - 0 ID=cds-WP_001298537.1;Parent=gene-AB69_RS20025;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AB69_RS20025;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 27333 28241 . + . ID=gene-AB69_RS20020;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AB69_RS20020;old_locus_tag=AB69_0418 NZ_JHDO01000058.1 Protein Homology CDS 27333 28241 . + 0 ID=cds-WP_001219309.1;Parent=gene-AB69_RS20020;Dbxref=GenBank:WP_001219309.1;Name=WP_001219309.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AB69_RS20020;product=fructokinase;protein_id=WP_001219309.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 28486 29670 . - . ID=gene-AB69_RS20015;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AB69_RS20015;old_locus_tag=AB69_0420 NZ_JHDO01000058.1 Protein Homology CDS 28486 29670 . - 0 ID=cds-WP_001326926.1;Parent=gene-AB69_RS20015;Dbxref=GenBank:WP_001326926.1;Name=WP_001326926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AB69_RS20015;product=MFS transporter AraJ;protein_id=WP_001326926.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 29796 32942 . - . ID=gene-AB69_RS20010;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AB69_RS20010;old_locus_tag=AB69_0421 NZ_JHDO01000058.1 Protein Homology CDS 29796 32942 . - 0 ID=cds-WP_000698951.1;Parent=gene-AB69_RS20010;Dbxref=GenBank:WP_000698951.1;Name=WP_000698951.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414931.1;locus_tag=AB69_RS20010;product=exonuclease subunit SbcC;protein_id=WP_000698951.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 32939 34141 . - . ID=gene-AB69_RS20005;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AB69_RS20005;old_locus_tag=AB69_0422 NZ_JHDO01000058.1 Protein Homology CDS 32939 34141 . - 0 ID=cds-WP_001221319.1;Parent=gene-AB69_RS20005;Dbxref=GenBank:WP_001221319.1;Name=WP_001221319.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AB69_RS20005;product=exonuclease subunit SbcD;protein_id=WP_001221319.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 34331 35020 . + . ID=gene-AB69_RS20000;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AB69_RS20000;old_locus_tag=AB69_0424 NZ_JHDO01000058.1 Protein Homology CDS 34331 35020 . + 0 ID=cds-WP_000113933.1;Parent=gene-AB69_RS20000;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AB69_RS20000;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 35078 36373 . + . ID=gene-AB69_RS19995;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AB69_RS19995;old_locus_tag=AB69_0425 NZ_JHDO01000058.1 Protein Homology CDS 35078 36373 . + 0 ID=cds-WP_000893623.1;Parent=gene-AB69_RS19995;Dbxref=GenBank:WP_000893623.1;Name=WP_000893623.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=AB69_RS19995;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893623.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 36780 38099 . + . ID=gene-AB69_RS19990;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AB69_RS19990;old_locus_tag=AB69_0427 NZ_JHDO01000058.1 Protein Homology CDS 36780 38099 . + 0 ID=cds-WP_000149639.1;Parent=gene-AB69_RS19990;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AB69_RS19990;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 38175 39548 . + . ID=gene-AB69_RS19985;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AB69_RS19985;old_locus_tag=AB69_0428 NZ_JHDO01000058.1 Protein Homology CDS 38175 39548 . + 0 ID=cds-WP_001295329.1;Parent=gene-AB69_RS19985;Dbxref=GenBank:WP_001295329.1;Name=WP_001295329.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AB69_RS19985;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 39704 41521 . + . ID=gene-AB69_RS19980;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AB69_RS19980;old_locus_tag=AB69_0429 NZ_JHDO01000058.1 Protein Homology CDS 39704 41521 . + 0 ID=cds-WP_001310597.1;Parent=gene-AB69_RS19980;Dbxref=GenBank:WP_001310597.1;Name=WP_001310597.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AB69_RS19980;product=maltodextrin glucosidase;protein_id=WP_001310597.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 41526 42107 . - . ID=gene-AB69_RS19975;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AB69_RS19975;old_locus_tag=AB69_0430 NZ_JHDO01000058.1 Protein Homology CDS 41526 42107 . - 0 ID=cds-WP_001009885.1;Parent=gene-AB69_RS19975;Dbxref=GenBank:WP_001009885.1;Name=WP_001009885.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AB69_RS19975;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 42200 43270 . + . ID=gene-AB69_RS19970;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AB69_RS19970;old_locus_tag=AB69_0431 NZ_JHDO01000058.1 Protein Homology CDS 42200 43270 . + 0 ID=cds-WP_001266503.1;Parent=gene-AB69_RS19970;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AB69_RS19970;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 43326 44453 . + . ID=gene-AB69_RS19965;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AB69_RS19965;old_locus_tag=AB69_0432 NZ_JHDO01000058.1 Protein Homology CDS 43326 44453 . + 0 ID=cds-WP_000667319.1;Parent=gene-AB69_RS19965;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AB69_RS19965;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 44476 44808 . + . ID=gene-AB69_RS19960;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AB69_RS19960;old_locus_tag=AB69_0433 NZ_JHDO01000058.1 Protein Homology CDS 44476 44808 . + 0 ID=cds-WP_000007629.1;Parent=gene-AB69_RS19960;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AB69_RS19960;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 44836 46683 . + . ID=gene-AB69_RS19955;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AB69_RS19955;old_locus_tag=AB69_0434 NZ_JHDO01000058.1 Protein Homology CDS 44836 46683 . + 0 ID=cds-WP_000934822.1;Parent=gene-AB69_RS19955;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AB69_RS19955;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 46694 47665 . + . ID=gene-AB69_RS19950;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AB69_RS19950;old_locus_tag=AB69_0435 NZ_JHDO01000058.1 Protein Homology CDS 46694 47665 . + 0 ID=cds-WP_000046637.1;Parent=gene-AB69_RS19950;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AB69_RS19950;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 47794 48141 . + . ID=gene-AB69_RS19945;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AB69_RS19945;old_locus_tag=AB69_0436 NZ_JHDO01000058.1 Protein Homology CDS 47794 48141 . + 0 ID=cds-WP_000974813.1;Parent=gene-AB69_RS19945;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AB69_RS19945;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 48318 49202 . - . ID=gene-AB69_RS19940;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AB69_RS19940;old_locus_tag=AB69_0437 NZ_JHDO01000058.1 Protein Homology CDS 48318 49202 . - 0 ID=cds-WP_001295328.1;Parent=gene-AB69_RS19940;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AB69_RS19940;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 49501 50040 . - . ID=gene-AB69_RS19935;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AB69_RS19935;old_locus_tag=AB69_0438 NZ_JHDO01000058.1 Protein Homology CDS 49501 50040 . - 0 ID=cds-WP_001326929.1;Parent=gene-AB69_RS19935;Dbxref=GenBank:WP_001326929.1;Name=WP_001326929.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AB69_RS19935;product=DUF3251 domain-containing protein;protein_id=WP_001326929.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 50191 50640 . + . ID=gene-AB69_RS0123595;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AB69_RS0123595;old_locus_tag=AB69_0439 NZ_JHDO01000058.1 Protein Homology CDS 50191 50640 . + 0 ID=cds-WP_000543535.1;Parent=gene-AB69_RS0123595;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AB69_RS0123595;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 50644 51747 . + . ID=gene-AB69_RS19930;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AB69_RS19930;old_locus_tag=AB69_0440 NZ_JHDO01000058.1 Protein Homology CDS 50644 51747 . + 0 ID=cds-WP_001150457.1;Parent=gene-AB69_RS19930;Dbxref=GenBank:WP_001150457.1;Name=WP_001150457.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AB69_RS19930;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150457.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 51836 52306 . + . ID=gene-AB69_RS19925;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AB69_RS19925;old_locus_tag=AB69_0441 NZ_JHDO01000058.1 Protein Homology CDS 51836 52306 . + 0 ID=cds-WP_001021161.1;Parent=gene-AB69_RS19925;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AB69_RS19925;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 52326 52745 . + . ID=gene-AB69_RS19920;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AB69_RS19920;old_locus_tag=AB69_0442 NZ_JHDO01000058.1 Protein Homology CDS 52326 52745 . + 0 ID=cds-WP_000801125.1;Parent=gene-AB69_RS19920;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AB69_RS19920;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 52823 53800 . + . ID=gene-AB69_RS19915;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AB69_RS19915;old_locus_tag=AB69_0443 NZ_JHDO01000058.1 Protein Homology CDS 52823 53800 . + 0 ID=cds-WP_000742109.1;Parent=gene-AB69_RS19915;Dbxref=GenBank:WP_000742109.1;Name=WP_000742109.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AB69_RS19915;product=thiamine-phosphate kinase;protein_id=WP_000742109.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 53778 54296 . + . ID=gene-AB69_RS19910;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AB69_RS19910;old_locus_tag=AB69_0444 NZ_JHDO01000058.1 Protein Homology CDS 53778 54296 . + 0 ID=cds-WP_000154044.1;Parent=gene-AB69_RS19910;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AB69_RS19910;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 54350 55324 . - . ID=gene-AB69_RS19905;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AB69_RS19905;old_locus_tag=AB69_0445 NZ_JHDO01000058.1 Protein Homology CDS 54350 55324 . - 0 ID=cds-WP_001199800.1;Parent=gene-AB69_RS19905;Dbxref=GenBank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AB69_RS19905;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 55504 57366 . - . ID=gene-AB69_RS19900;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AB69_RS19900;old_locus_tag=AB69_0446 NZ_JHDO01000058.1 Protein Homology CDS 55504 57366 . - 0 ID=cds-WP_000006797.1;Parent=gene-AB69_RS19900;Dbxref=GenBank:WP_000006797.1;Name=WP_000006797.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414954.1;locus_tag=AB69_RS19900;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006797.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 57391 58290 . - . ID=gene-AB69_RS19895;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AB69_RS19895;old_locus_tag=AB69_0447 NZ_JHDO01000058.1 Protein Homology CDS 57391 58290 . - 0 ID=cds-WP_000347217.1;Parent=gene-AB69_RS19895;Dbxref=GenBank:WP_000347217.1;Name=WP_000347217.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AB69_RS19895;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347217.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 58290 58532 . - . ID=gene-AB69_RS19890;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AB69_RS19890;old_locus_tag=AB69_0448 NZ_JHDO01000058.1 Protein Homology CDS 58290 58532 . - 0 ID=cds-WP_001124935.1;Parent=gene-AB69_RS19890;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AB69_RS19890;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 58738 60186 . + . ID=gene-AB69_RS19885;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AB69_RS19885;old_locus_tag=AB69_0449 NZ_JHDO01000058.1 Protein Homology CDS 58738 60186 . + 0 ID=cds-WP_032230850.1;Parent=gene-AB69_RS19885;Dbxref=GenBank:WP_032230850.1;Name=WP_032230850.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AB69_RS19885;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_032230850.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 60240 60830 . - . ID=gene-AB69_RS19880;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AB69_RS19880;old_locus_tag=AB69_0450 NZ_JHDO01000058.1 Protein Homology CDS 60240 60830 . - 0 ID=cds-WP_032230852.1;Parent=gene-AB69_RS19880;Dbxref=GenBank:WP_032230852.1;Name=WP_032230852.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308505.2;locus_tag=AB69_RS19880;product=protein deglycase YajL;protein_id=WP_032230852.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 60793 61704 . - . ID=gene-AB69_RS19875;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AB69_RS19875;old_locus_tag=AB69_0451 NZ_JHDO01000058.1 Protein Homology CDS 60793 61704 . - 0 ID=cds-WP_032230854.1;Parent=gene-AB69_RS19875;Dbxref=GenBank:WP_032230854.1;Name=WP_032230854.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AB69_RS19875;product=2-dehydropantoate 2-reductase;protein_id=WP_032230854.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 61872 62363 . + . ID=gene-AB69_RS19870;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AB69_RS19870;old_locus_tag=AB69_0452 NZ_JHDO01000058.1 Protein Homology CDS 61872 62363 . + 0 ID=cds-WP_001138904.1;Parent=gene-AB69_RS19870;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AB69_RS19870;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 62491 63855 . - . ID=gene-AB69_RS19865;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AB69_RS19865;old_locus_tag=AB69_0453 NZ_JHDO01000058.1 Protein Homology CDS 62491 63855 . - 0 ID=cds-WP_001000960.1;Parent=gene-AB69_RS19865;Dbxref=GenBank:WP_001000960.1;Name=WP_001000960.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414961.4;locus_tag=AB69_RS19865;product=MFS transporter;protein_id=WP_001000960.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 64004 64894 . - . ID=gene-AB69_RS19860;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AB69_RS19860;old_locus_tag=AB69_0454 NZ_JHDO01000058.1 Protein Homology CDS 64004 64894 . - 0 ID=cds-WP_000971336.1;Parent=gene-AB69_RS19860;Dbxref=GenBank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AB69_RS19860;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 64906 65235 . - . ID=gene-AB69_RS19855;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AB69_RS19855;old_locus_tag=AB69_0455 NZ_JHDO01000058.1 Protein Homology CDS 64906 65235 . - 0 ID=cds-WP_000019869.1;Parent=gene-AB69_RS19855;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AB69_RS19855;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 65235 65849 . - . ID=gene-AB69_RS19850;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AB69_RS19850;old_locus_tag=AB69_0456 NZ_JHDO01000058.1 Protein Homology CDS 65235 65849 . - 0 ID=cds-WP_000179819.1;Parent=gene-AB69_RS19850;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AB69_RS19850;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 65839 67830 . - . ID=gene-AB69_RS19845;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AB69_RS19845;old_locus_tag=AB69_0457 NZ_JHDO01000058.1 Protein Homology CDS 65839 67830 . - 0 ID=cds-WP_000467180.1;Parent=gene-AB69_RS19845;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AB69_RS19845;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 67852 68799 . - . ID=gene-AB69_RS19840;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AB69_RS19840;old_locus_tag=AB69_0458 NZ_JHDO01000058.1 Protein Homology CDS 67852 68799 . - 0 ID=cds-WP_001239436.1;Parent=gene-AB69_RS19840;Dbxref=GenBank:WP_001239436.1;Name=WP_001239436.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AB69_RS19840;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239436.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 69259 70734 . - . ID=gene-AB69_RS19835;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AB69_RS19835;old_locus_tag=AB69_0459 NZ_JHDO01000058.1 Protein Homology CDS 69259 70734 . - 0 ID=cds-WP_000098429.1;Parent=gene-AB69_RS19835;Dbxref=GenBank:WP_000098429.1;Name=WP_000098429.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AB69_RS19835;product=muropeptide MFS transporter AmpG;protein_id=WP_000098429.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 70778 71356 . - . ID=gene-AB69_RS19830;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AB69_RS19830;old_locus_tag=AB69_0460 NZ_JHDO01000058.1 Protein Homology CDS 70778 71356 . - 0 ID=cds-WP_001295326.1;Parent=gene-AB69_RS19830;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AB69_RS19830;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 71661 71978 . + . ID=gene-AB69_RS19825;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AB69_RS19825;old_locus_tag=AB69_0461 NZ_JHDO01000058.1 Protein Homology CDS 71661 71978 . + 0 ID=cds-WP_000973448.1;Parent=gene-AB69_RS19825;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AB69_RS19825;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 72322 73620 . + . ID=gene-AB69_RS19815;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AB69_RS19815;old_locus_tag=AB69_0463 NZ_JHDO01000058.1 Protein Homology CDS 72322 73620 . + 0 ID=cds-WP_001198386.1;Parent=gene-AB69_RS19815;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AB69_RS19815;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 73866 74489 . + . ID=gene-AB69_RS19810;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AB69_RS19810;old_locus_tag=AB69_0464 NZ_JHDO01000058.1 Protein Homology CDS 73866 74489 . + 0 ID=cds-WP_000122253.1;Parent=gene-AB69_RS19810;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AB69_RS19810;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 74615 75889 . + . ID=gene-AB69_RS19805;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AB69_RS19805;old_locus_tag=AB69_0465 NZ_JHDO01000058.1 Protein Homology CDS 74615 75889 . + 0 ID=cds-WP_000130305.1;Parent=gene-AB69_RS19805;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AB69_RS19805;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 76077 78431 . + . ID=gene-AB69_RS19800;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AB69_RS19800;old_locus_tag=AB69_0466 NZ_JHDO01000058.1 Protein Homology CDS 76077 78431 . + 0 ID=cds-WP_001295325.1;Parent=gene-AB69_RS19800;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AB69_RS19800;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 78622 78912 . + . ID=gene-AB69_RS19795;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AB69_RS19795;old_locus_tag=AB69_0467 NZ_JHDO01000058.1 Protein Homology CDS 78622 78912 . + 0 ID=cds-WP_254892905.1;Parent=gene-AB69_RS19795;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AB69_RS19795;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 79104 80975 . + . ID=gene-AB69_RS19790;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AB69_RS19790;old_locus_tag=AB69_0468 NZ_JHDO01000058.1 Protein Homology CDS 79104 80975 . + 0 ID=cds-WP_000969372.1;Parent=gene-AB69_RS19790;Dbxref=GenBank:WP_000969372.1;Name=WP_000969372.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AB69_RS19790;product=peptidylprolyl isomerase;protein_id=WP_000969372.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 81126 81497 . + . ID=gene-AB69_RS19785;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AB69_RS19785;old_locus_tag=AB69_0469 NZ_JHDO01000058.1 Protein Homology CDS 81126 81497 . + 0 ID=cds-WP_000680312.1;Parent=gene-AB69_RS19785;Dbxref=GenBank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AB69_RS19785;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680312.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 81591 81989 . + . ID=gene-AB69_RS19780;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AB69_RS19780;old_locus_tag=AB69_0470 NZ_JHDO01000058.1 Protein Homology CDS 81591 81989 . + 0 ID=cds-WP_001194534.1;Parent=gene-AB69_RS19780;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AB69_RS19780;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 82041 82736 . - . ID=gene-AB69_RS19775;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AB69_RS19775;old_locus_tag=AB69_0471 NZ_JHDO01000058.1 Protein Homology CDS 82041 82736 . - 0 ID=cds-WP_000817220.1;Parent=gene-AB69_RS19775;Dbxref=GenBank:WP_000817220.1;Name=WP_000817220.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414978.1;locus_tag=AB69_RS19775;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817220.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 82801 84501 . - . ID=gene-AB69_RS19770;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AB69_RS19770;old_locus_tag=AB69_0472 NZ_JHDO01000058.1 Protein Homology CDS 82801 84501 . - 0 ID=cds-WP_001238234.1;Parent=gene-AB69_RS19770;Dbxref=GenBank:WP_001238234.1;Name=WP_001238234.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414979.1;locus_tag=AB69_RS19770;product=SgrR family transcriptional regulator;protein_id=WP_001238234.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 84601 85419 . + . ID=gene-AB69_RS19765;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AB69_RS19765;old_locus_tag=AB69_0473 NZ_JHDO01000058.1 Protein Homology CDS 84601 85419 . + 0 ID=cds-WP_001336137.1;Parent=gene-AB69_RS19765;Dbxref=GenBank:WP_001336137.1;Name=WP_001336137.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AB69_RS19765;product=HMP-PP phosphatase;protein_id=WP_001336137.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 85572 86030 . + . ID=gene-AB69_RS19760;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AB69_RS19760;old_locus_tag=AB69_0474 NZ_JHDO01000058.1 Protein Homology CDS 85572 86030 . + 0 ID=cds-WP_000884589.1;Parent=gene-AB69_RS19760;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AB69_RS19760;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 86060 87832 . + . ID=gene-AB69_RS19755;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AB69_RS19755;old_locus_tag=AB69_0475 NZ_JHDO01000058.1 Protein Homology CDS 86060 87832 . + 0 ID=cds-WP_001235649.1;Parent=gene-AB69_RS19755;Dbxref=GenBank:WP_001235649.1;Name=WP_001235649.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414982.1;locus_tag=AB69_RS19755;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235649.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 87825 89606 . + . ID=gene-AB69_RS19750;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AB69_RS19750;old_locus_tag=AB69_0476 NZ_JHDO01000058.1 Protein Homology CDS 87825 89606 . + 0 ID=cds-WP_001256201.1;Parent=gene-AB69_RS19750;Dbxref=GenBank:WP_001256201.1;Name=WP_001256201.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AB69_RS19750;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256201.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 89787 90125 . + . ID=gene-AB69_RS19745;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AB69_RS19745;old_locus_tag=AB69_0478 NZ_JHDO01000058.1 Protein Homology CDS 89787 90125 . + 0 ID=cds-WP_000780338.1;Parent=gene-AB69_RS19745;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AB69_RS19745;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 90155 91441 . + . ID=gene-AB69_RS19740;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AB69_RS19740;old_locus_tag=AB69_0479 NZ_JHDO01000058.1 Protein Homology CDS 90155 91441 . + 0 ID=cds-WP_000685029.1;Parent=gene-AB69_RS19740;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AB69_RS19740;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 91490 92350 . - . ID=gene-AB69_RS19735;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AB69_RS19735;old_locus_tag=AB69_0480 NZ_JHDO01000058.1 Protein Homology CDS 91490 92350 . - 0 ID=cds-WP_000075876.1;Parent=gene-AB69_RS19735;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AB69_RS19735;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 92568 93140 . + . ID=gene-AB69_RS19730;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AB69_RS19730;old_locus_tag=AB69_0482 NZ_JHDO01000058.1 Protein Homology CDS 92568 93140 . + 0 ID=cds-WP_000779831.1;Parent=gene-AB69_RS19730;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AB69_RS19730;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 93171 93482 . - . ID=gene-AB69_RS19725;Name=AB69_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS19725;old_locus_tag=AB69_0483 NZ_JHDO01000058.1 Protein Homology CDS 93171 93482 . - 0 ID=cds-WP_000409911.1;Parent=gene-AB69_RS19725;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AB69_RS19725;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 93645 93741 . + . ID=gene-AB69_RS25710;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AB69_RS25710 NZ_JHDO01000058.1 cmsearch SRP_RNA 93645 93741 . + . ID=rna-AB69_RS25710;Parent=gene-AB69_RS25710;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25710;product=signal recognition particle sRNA small type NZ_JHDO01000058.1 cmsearch exon 93645 93741 . + . ID=exon-AB69_RS25710-1;Parent=rna-AB69_RS25710;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25710;product=signal recognition particle sRNA small type NZ_JHDO01000058.1 RefSeq gene 93861 94214 . + . ID=gene-AB69_RS19720;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AB69_RS19720;old_locus_tag=AB69_0484 NZ_JHDO01000058.1 Protein Homology CDS 93861 94214 . + 0 ID=cds-WP_000878140.1;Parent=gene-AB69_RS19720;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AB69_RS19720;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 94256 95806 . - . ID=gene-AB69_RS19715;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AB69_RS19715;old_locus_tag=AB69_0485 NZ_JHDO01000058.1 Protein Homology CDS 94256 95806 . - 0 ID=cds-WP_001310610.1;Parent=gene-AB69_RS19715;Dbxref=GenBank:WP_001310610.1;Name=WP_001310610.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414990.2;locus_tag=AB69_RS19715;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001310610.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 95970 96440 . - . ID=gene-AB69_RS19710;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AB69_RS19710;old_locus_tag=AB69_0486 NZ_JHDO01000058.1 Protein Homology CDS 95970 96440 . - 0 ID=cds-WP_000136192.1;Parent=gene-AB69_RS19710;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AB69_RS19710;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 96556 97107 . - . ID=gene-AB69_RS19705;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AB69_RS19705;old_locus_tag=AB69_0487 NZ_JHDO01000058.1 Protein Homology CDS 96556 97107 . - 0 ID=cds-WP_032230857.1;Parent=gene-AB69_RS19705;Dbxref=GenBank:WP_032230857.1;Name=WP_032230857.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AB69_RS19705;product=maltose O-acetyltransferase;protein_id=WP_032230857.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 97279 97497 . - . ID=gene-AB69_RS19700;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB69_RS19700;old_locus_tag=AB69_0488 NZ_JHDO01000058.1 Protein Homology CDS 97279 97497 . - 0 ID=cds-WP_001291435.1;Parent=gene-AB69_RS19700;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AB69_RS19700;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 97523 97897 . - . ID=gene-AB69_RS19695;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AB69_RS19695;old_locus_tag=AB69_0489 NZ_JHDO01000058.1 Protein Homology CDS 97523 97897 . - 0 ID=cds-WP_000344800.1;Parent=gene-AB69_RS19695;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AB69_RS19695;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 98443 101592 . - . ID=gene-AB69_RS19690;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AB69_RS19690;old_locus_tag=AB69_0490 NZ_JHDO01000058.1 Protein Homology CDS 98443 101592 . - 0 ID=cds-WP_032230858.1;Parent=gene-AB69_RS19690;Dbxref=GenBank:WP_032230858.1;Name=WP_032230858.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AB69_RS19690;product=efflux RND transporter permease AcrB;protein_id=WP_032230858.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 101615 102808 . - . ID=gene-AB69_RS19685;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AB69_RS19685;old_locus_tag=AB69_0491 NZ_JHDO01000058.1 Protein Homology CDS 101615 102808 . - 0 ID=cds-WP_001295324.1;Parent=gene-AB69_RS19685;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AB69_RS19685;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 102950 103597 . + . ID=gene-AB69_RS19680;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AB69_RS19680;old_locus_tag=AB69_0492 NZ_JHDO01000058.1 Protein Homology CDS 102950 103597 . + 0 ID=cds-WP_000101737.1;Parent=gene-AB69_RS19680;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AB69_RS19680;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 103725 107087 . + . ID=gene-AB69_RS19675;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AB69_RS19675;old_locus_tag=AB69_0493 NZ_JHDO01000058.1 Protein Homology CDS 103725 107087 . + 0 ID=cds-WP_000177732.1;Parent=gene-AB69_RS19675;Dbxref=GenBank:WP_000177732.1;Name=WP_000177732.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=AB69_RS19675;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 107299 107460 . - . ID=gene-AB69_RS19670;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AB69_RS19670;old_locus_tag=AB69_0494 NZ_JHDO01000058.1 Protein Homology CDS 107299 107460 . - 0 ID=cds-WP_000051153.1;Parent=gene-AB69_RS19670;Dbxref=GenBank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AB69_RS19670;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051153.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 107474 108001 . - . ID=gene-AB69_RS19665;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AB69_RS19665;old_locus_tag=AB69_0495 NZ_JHDO01000058.1 Protein Homology CDS 107474 108001 . - 0 ID=cds-WP_000844874.1;Parent=gene-AB69_RS19665;Dbxref=GenBank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AB69_RS19665;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 108071 108448 . + . ID=gene-AB69_RS19660;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AB69_RS19660;old_locus_tag=AB69_0496 NZ_JHDO01000058.1 Protein Homology CDS 108071 108448 . + 0 ID=cds-WP_001188905.1;Parent=gene-AB69_RS19660;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AB69_RS19660;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 108599 109150 . + . ID=gene-AB69_RS19655;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AB69_RS19655;old_locus_tag=AB69_0497 NZ_JHDO01000058.1 Protein Homology CDS 108599 109150 . + 0 ID=cds-WP_000127356.1;Parent=gene-AB69_RS19655;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AB69_RS19655;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 109279 111210 . + . ID=gene-AB69_RS19650;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AB69_RS19650;old_locus_tag=AB69_0498 NZ_JHDO01000058.1 Protein Homology CDS 109279 111210 . + 0 ID=cds-WP_000122013.1;Parent=gene-AB69_RS19650;Dbxref=GenBank:WP_000122013.1;Name=WP_000122013.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=AB69_RS19650;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122013.1;transl_table=11 NZ_JHDO01000058.1 cmsearch sequence_feature 110543 110607 . + . ID=id-AB69_RS19650;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS19650 NZ_JHDO01000058.1 RefSeq gene 111263 111592 . + . ID=gene-AB69_RS19645;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AB69_RS19645;old_locus_tag=AB69_0499 NZ_JHDO01000058.1 Protein Homology CDS 111263 111592 . + 0 ID=cds-WP_000467098.1;Parent=gene-AB69_RS19645;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AB69_RS19645;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 111592 112197 . + . ID=gene-AB69_RS19640;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AB69_RS19640;old_locus_tag=AB69_0500 NZ_JHDO01000058.1 Protein Homology CDS 111592 112197 . + 0 ID=cds-WP_001195025.1;Parent=gene-AB69_RS19640;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AB69_RS19640;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 112307 114181 . + . ID=gene-AB69_RS19635;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AB69_RS19635;old_locus_tag=AB69_0501 NZ_JHDO01000058.1 Protein Homology CDS 112307 114181 . + 0 ID=cds-WP_000678201.1;Parent=gene-AB69_RS19635;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AB69_RS19635;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 114362 115006 . + . ID=gene-AB69_RS19630;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AB69_RS19630;old_locus_tag=AB69_0502 NZ_JHDO01000058.1 Protein Homology CDS 114362 115006 . + 0 ID=cds-WP_001220233.1;Parent=gene-AB69_RS19630;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AB69_RS19630;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 115242 116204 . + . ID=gene-AB69_RS19625;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AB69_RS19625;old_locus_tag=AB69_0503 NZ_JHDO01000058.1 Protein Homology CDS 115242 116204 . + 0 ID=cds-WP_001250103.1;Parent=gene-AB69_RS19625;Dbxref=GenBank:WP_001250103.1;Name=WP_001250103.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AB69_RS19625;product=ferrochelatase;protein_id=WP_001250103.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 116201 117160 . - . ID=gene-AB69_RS19620;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AB69_RS19620;old_locus_tag=AB69_0504 NZ_JHDO01000058.1 Protein Homology CDS 116201 117160 . - 0 ID=cds-WP_000801812.1;Parent=gene-AB69_RS19620;Dbxref=GenBank:WP_000801812.1;Name=WP_000801812.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AB69_RS19620;product=acetyl esterase;protein_id=WP_000801812.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 117312 118616 . + . ID=gene-AB69_RS19615;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AB69_RS19615;old_locus_tag=AB69_0505 NZ_JHDO01000058.1 Protein Homology CDS 117312 118616 . + 0 ID=cds-WP_000671574.1;Parent=gene-AB69_RS19615;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AB69_RS19615;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 118722 120425 . - . ID=gene-AB69_RS19610;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AB69_RS19610;old_locus_tag=AB69_0506 NZ_JHDO01000058.1 Protein Homology CDS 118722 120425 . - 0 ID=cds-WP_032235678.1;Parent=gene-AB69_RS19610;Dbxref=GenBank:WP_032235678.1;Name=WP_032235678.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674073.1;locus_tag=AB69_RS19610;product=YbaL family putative K(+) efflux transporter;protein_id=WP_032235678.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 120663 121883 . - . ID=gene-AB69_RS19605;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AB69_RS19605;old_locus_tag=AB69_0507 NZ_JHDO01000058.1 Protein Homology CDS 120663 121883 . - 0 ID=cds-WP_001251634.1;Parent=gene-AB69_RS19605;Dbxref=GenBank:WP_001251634.1;Name=WP_001251634.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308559.1;locus_tag=AB69_RS19605;product=fosmidomycin MFS transporter;protein_id=WP_001251634.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 122101 123753 . + . ID=gene-AB69_RS19600;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AB69_RS19600;old_locus_tag=AB69_0508 NZ_JHDO01000058.1 Protein Homology CDS 122101 123753 . + 0 ID=cds-WP_032230861.1;Parent=gene-AB69_RS19600;Dbxref=GenBank:WP_032230861.1;Name=WP_032230861.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308560.1;locus_tag=AB69_RS19600;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_032230861.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 123790 124269 . - . ID=gene-AB69_RS19595;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AB69_RS19595;old_locus_tag=AB69_0509 NZ_JHDO01000058.1 Protein Homology CDS 123790 124269 . - 0 ID=cds-WP_000186631.1;Parent=gene-AB69_RS19595;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AB69_RS19595;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 124473 125267 . - . ID=gene-AB69_RS19590;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AB69_RS19590;old_locus_tag=AB69_0510 NZ_JHDO01000058.1 Protein Homology CDS 124473 125267 . - 0 ID=cds-WP_000365173.1;Parent=gene-AB69_RS19590;Dbxref=GenBank:WP_000365173.1;Name=WP_000365173.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AB69_RS19590;product=TraB/GumN family protein;protein_id=WP_000365173.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 125405 125746 . + . ID=gene-AB69_RS19585;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AB69_RS19585;old_locus_tag=AB69_0511 NZ_JHDO01000058.1 Protein Homology CDS 125405 125746 . + 0 ID=cds-WP_000806442.1;Parent=gene-AB69_RS19585;Dbxref=GenBank:WP_000806442.1;Name=WP_000806442.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AB69_RS19585;product=HigA family addiction module antitoxin;protein_id=WP_000806442.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 126062 128566 . - . ID=gene-AB69_RS19580;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AB69_RS19580;old_locus_tag=AB69_0512 NZ_JHDO01000058.1 Protein Homology CDS 126062 128566 . - 0 ID=cds-WP_001652831.1;Parent=gene-AB69_RS19580;Dbxref=GenBank:WP_001652831.1;Name=WP_001652831.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AB69_RS19580;product=copper-exporting P-type ATPase CopA;protein_id=WP_001652831.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 128828 129760 . + . ID=gene-AB69_RS19575;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AB69_RS19575;old_locus_tag=AB69_0513 NZ_JHDO01000058.1 Protein Homology CDS 128828 129760 . + 0 ID=cds-WP_000883034.1;Parent=gene-AB69_RS19575;Dbxref=GenBank:WP_000883034.1;Name=WP_000883034.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=AB69_RS19575;product=glutaminase A;protein_id=WP_000883034.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 129763 131055 . + . ID=gene-AB69_RS19570;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AB69_RS19570;old_locus_tag=AB69_0514 NZ_JHDO01000058.1 Protein Homology CDS 129763 131055 . + 0 ID=cds-WP_000982172.1;Parent=gene-AB69_RS19570;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AB69_RS19570;product=APC family permease;protein_id=WP_000982172.1;transl_table=11 NZ_JHDO01000058.1 RefSeq pseudogene 131086 131183 . + . ID=gene-AB69_RS30185;Name=AB69_RS30185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30185;partial=true;pseudo=true;start_range=.,131086 NZ_JHDO01000058.1 Protein Homology CDS 131086 131183 . + 0 ID=cds-AB69_RS30185;Parent=gene-AB69_RS30185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AB69_RS30185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,131086;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 131180 131587 . + . ID=gene-AB69_RS19565;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AB69_RS19565;old_locus_tag=AB69_0515 NZ_JHDO01000058.1 Protein Homology CDS 131180 131587 . + 0 ID=cds-WP_001026747.1;Parent=gene-AB69_RS19565;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AB69_RS19565;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 131588 132046 . - . ID=gene-AB69_RS19560;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AB69_RS19560;old_locus_tag=AB69_0516 NZ_JHDO01000058.1 Protein Homology CDS 131588 132046 . - 0 ID=cds-WP_000970323.1;Parent=gene-AB69_RS19560;Dbxref=GenBank:WP_000970323.1;Name=WP_000970323.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AB69_RS19560;product=NfeD family protein;protein_id=WP_000970323.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 132043 132960 . - . ID=gene-AB69_RS19555;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AB69_RS19555;old_locus_tag=AB69_0517 NZ_JHDO01000058.1 Protein Homology CDS 132043 132960 . - 0 ID=cds-WP_000904502.1;Parent=gene-AB69_RS19555;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AB69_RS19555;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 133106 133783 . + . ID=gene-AB69_RS19550;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AB69_RS19550;old_locus_tag=AB69_0518 NZ_JHDO01000058.1 Protein Homology CDS 133106 133783 . + 0 ID=cds-WP_001157540.1;Parent=gene-AB69_RS19550;Dbxref=GenBank:WP_001157540.1;Name=WP_001157540.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AB69_RS19550;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157540.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 133770 134549 . + . ID=gene-AB69_RS19545;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AB69_RS19545;old_locus_tag=AB69_0519 NZ_JHDO01000058.1 Protein Homology CDS 133770 134549 . + 0 ID=cds-WP_001295323.1;Parent=gene-AB69_RS19545;Dbxref=GenBank:WP_001295323.1;Name=WP_001295323.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AB69_RS19545;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001295323.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 134612 135466 . - . ID=gene-AB69_RS19540;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AB69_RS19540;old_locus_tag=AB69_0520 NZ_JHDO01000058.1 Protein Homology CDS 134612 135466 . - 0 ID=cds-WP_001300573.1;Parent=gene-AB69_RS19540;Dbxref=GenBank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AB69_RS19540;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 135527 136336 . - . ID=gene-AB69_RS19535;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AB69_RS19535;old_locus_tag=AB69_0521 NZ_JHDO01000058.1 Protein Homology CDS 135527 136336 . - 0 ID=cds-WP_074528738.1;Parent=gene-AB69_RS19535;Dbxref=GenBank:WP_074528738.1;Name=WP_074528738.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AB69_RS19535;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_074528738.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 136326 136949 . - . ID=gene-AB69_RS19530;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AB69_RS19530;old_locus_tag=AB69_0522 NZ_JHDO01000058.1 Protein Homology CDS 136326 136949 . - 0 ID=cds-WP_001295836.1;Parent=gene-AB69_RS19530;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AB69_RS19530;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 136920 137606 . + . ID=gene-AB69_RS19525;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AB69_RS19525;old_locus_tag=AB69_0523 NZ_JHDO01000058.1 Protein Homology CDS 136920 137606 . + 0 ID=cds-WP_001110573.1;Parent=gene-AB69_RS19525;Dbxref=GenBank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AB69_RS19525;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110573.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 137603 140017 . + . ID=gene-AB69_RS19520;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AB69_RS19520;old_locus_tag=AB69_0524 NZ_JHDO01000058.1 Protein Homology CDS 137603 140017 . + 0 ID=cds-WP_032230863.1;Parent=gene-AB69_RS19520;Dbxref=GenBank:WP_032230863.1;Name=WP_032230863.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AB69_RS19520;product=putative ABC transporter permease subunit YbbP;protein_id=WP_032230863.1;transl_table=11 NZ_JHDO01000058.1 RefSeq gene 140448 143344 . + . ID=gene-AB69_RS19515;Name=rhsD;end_range=143344,.;gbkey=Gene;gene=rhsD;gene_biotype=protein_coding;locus_tag=AB69_RS19515;old_locus_tag=AB69_0525;partial=true NZ_JHDO01000058.1 Protein Homology CDS 140448 143344 . + 0 ID=cds-WP_032230864.1;Parent=gene-AB69_RS19515;Dbxref=GenBank:WP_032230864.1;Name=WP_032230864.1;end_range=143344,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AB69_RS19515;partial=true;product=rhs element protein RhsD;protein_id=WP_032230864.1;transl_table=11 ##sequence-region NZ_JHDO01000059.1 1 39044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000059.1 RefSeq region 1 39044 . + . ID=NZ_JHDO01000059.1:1..39044;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000059.1 RefSeq pseudogene 1 1721 . + . ID=gene-AB69_RS19510;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AB69_RS19510;old_locus_tag=AB69_0526;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000059.1 Protein Homology CDS 1 1721 . + 2 ID=cds-AB69_RS19510;Parent=gene-AB69_RS19510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AB69_RS19510;partial=true;product=rhs element protein RhsD;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 1761 2129 . + . ID=gene-AB69_RS19505;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;locus_tag=AB69_RS19505;old_locus_tag=AB69_0527 NZ_JHDO01000059.1 Protein Homology CDS 1761 2129 . + 0 ID=cds-WP_000877768.1;Parent=gene-AB69_RS19505;Dbxref=GenBank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;gene=ybbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AB69_RS19505;product=YbbC/YhhH family protein;protein_id=WP_000877768.1;transl_table=11 NZ_JHDO01000059.1 RefSeq pseudogene 2153 2839 . + . ID=gene-AB69_RS19500;Name=AB69_RS19500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS19500;old_locus_tag=AB69_0528;partial=true;pseudo=true;start_range=.,2153 NZ_JHDO01000059.1 Protein Homology CDS 2153 2839 . + 0 ID=cds-AB69_RS19500;Parent=gene-AB69_RS19500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AB69_RS19500;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2153;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 2820 3080 . + . ID=gene-AB69_RS28395;Name=AB69_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28395 NZ_JHDO01000059.1 Protein Homology CDS 2820 3080 . + 0 ID=cds-WP_001320180.1;Parent=gene-AB69_RS28395;Dbxref=GenBank:WP_001320180.1;Name=WP_001320180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308588.1;locus_tag=AB69_RS28395;product=hypothetical protein;protein_id=WP_001320180.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 3137 3310 . + . ID=gene-AB69_RS29940;Name=AB69_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29940 NZ_JHDO01000059.1 Protein Homology CDS 3137 3310 . + 0 ID=cds-WP_001297301.1;Parent=gene-AB69_RS29940;Dbxref=GenBank:WP_001297301.1;Name=WP_001297301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297301.1;locus_tag=AB69_RS29940;product=hypothetical protein;protein_id=WP_001297301.1;transl_table=11 NZ_JHDO01000059.1 RefSeq pseudogene 3677 3772 . + . ID=gene-AB69_RS30805;Name=AB69_RS30805;end_range=3772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30805;partial=true;pseudo=true NZ_JHDO01000059.1 Protein Homology CDS 3677 3772 . + 0 ID=cds-AB69_RS30805;Parent=gene-AB69_RS30805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AB69_RS30805;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000059.1 RefSeq pseudogene 3831 4196 . - . ID=gene-AB69_RS19495;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;locus_tag=AB69_RS19495;old_locus_tag=AB69_0529;partial=true;pseudo=true;start_range=.,3831 NZ_JHDO01000059.1 Protein Homology CDS 3831 4196 . - 0 ID=cds-AB69_RS19495;Parent=gene-AB69_RS19495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ylbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AB69_RS19495;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3831;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 4312 5406 . - . ID=gene-AB69_RS19490;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AB69_RS19490;old_locus_tag=AB69_0530 NZ_JHDO01000059.1 Protein Homology CDS 4312 5406 . - 0 ID=cds-WP_001157936.1;Parent=gene-AB69_RS19490;Dbxref=GenBank:WP_001157936.1;Name=WP_001157936.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415036.1;locus_tag=AB69_RS19490;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157936.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 5475 6401 . - . ID=gene-AB69_RS19485;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AB69_RS19485;old_locus_tag=AB69_0531 NZ_JHDO01000059.1 Protein Homology CDS 5475 6401 . - 0 ID=cds-WP_032230874.1;Parent=gene-AB69_RS19485;Dbxref=GenBank:WP_032230874.1;Name=WP_032230874.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AB69_RS19485;product=HTH-type transcriptional activator AllS;protein_id=WP_032230874.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 6631 7113 . + . ID=gene-AB69_RS19480;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AB69_RS19480;old_locus_tag=AB69_0532 NZ_JHDO01000059.1 Protein Homology CDS 6631 7113 . + 0 ID=cds-WP_000776388.1;Parent=gene-AB69_RS19480;Dbxref=GenBank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AB69_RS19480;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 7191 8006 . + . ID=gene-AB69_RS19475;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AB69_RS19475;old_locus_tag=AB69_0533 NZ_JHDO01000059.1 Protein Homology CDS 7191 8006 . + 0 ID=cds-WP_000141275.1;Parent=gene-AB69_RS19475;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AB69_RS19475;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 8096 9877 . + . ID=gene-AB69_RS19470;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AB69_RS19470;old_locus_tag=AB69_0534 NZ_JHDO01000059.1 Protein Homology CDS 8096 9877 . + 0 ID=cds-WP_001096881.1;Parent=gene-AB69_RS19470;Dbxref=GenBank:WP_001096881.1;Name=WP_001096881.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AB69_RS19470;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 9890 10666 . + . ID=gene-AB69_RS19465;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AB69_RS19465;old_locus_tag=AB69_0535 NZ_JHDO01000059.1 Protein Homology CDS 9890 10666 . + 0 ID=cds-WP_001736945.1;Parent=gene-AB69_RS19465;Dbxref=GenBank:WP_001736945.1;Name=WP_001736945.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415041.1;locus_tag=AB69_RS19465;product=hydroxypyruvate isomerase;protein_id=WP_001736945.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 10766 11644 . + . ID=gene-AB69_RS19460;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AB69_RS19460;old_locus_tag=AB69_0536 NZ_JHDO01000059.1 Protein Homology CDS 10766 11644 . + 0 ID=cds-WP_000765839.1;Parent=gene-AB69_RS19460;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AB69_RS19460;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 11813 13267 . + . ID=gene-AB69_RS19455;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AB69_RS19455;old_locus_tag=AB69_0537 NZ_JHDO01000059.1 Protein Homology CDS 11813 13267 . + 0 ID=cds-WP_000401100.1;Parent=gene-AB69_RS19455;Dbxref=GenBank:WP_000401100.1;Name=WP_000401100.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AB69_RS19455;product=allantoin transporter;protein_id=WP_000401100.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 13327 14688 . + . ID=gene-AB69_RS19450;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AB69_RS19450;old_locus_tag=AB69_0538 NZ_JHDO01000059.1 Protein Homology CDS 13327 14688 . + 0 ID=cds-WP_000006900.1;Parent=gene-AB69_RS19450;Dbxref=GenBank:WP_000006900.1;Name=WP_000006900.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AB69_RS19450;product=allantoinase AllB;protein_id=WP_000006900.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 14745 16046 . + . ID=gene-AB69_RS19445;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AB69_RS19445;old_locus_tag=AB69_0539 NZ_JHDO01000059.1 Protein Homology CDS 14745 16046 . + 0 ID=cds-WP_001302767.1;Parent=gene-AB69_RS19445;Dbxref=GenBank:WP_001302767.1;Name=WP_001302767.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AB69_RS19445;product=uracil/xanthine transporter;protein_id=WP_001302767.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 16068 17213 . + . ID=gene-AB69_RS19440;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AB69_RS19440;old_locus_tag=AB69_0540 NZ_JHDO01000059.1 Protein Homology CDS 16068 17213 . + 0 ID=cds-WP_001333621.1;Parent=gene-AB69_RS19440;Dbxref=GenBank:WP_001333621.1;Name=WP_001333621.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AB69_RS19440;product=glycerate 3-kinase;protein_id=WP_001333621.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 17441 18226 . - . ID=gene-AB69_RS19435;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AB69_RS19435;old_locus_tag=AB69_0541 NZ_JHDO01000059.1 Protein Homology CDS 17441 18226 . - 0 ID=cds-WP_000540997.1;Parent=gene-AB69_RS19435;Dbxref=GenBank:WP_000540997.1;Name=WP_000540997.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415048.1;locus_tag=AB69_RS19435;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540997.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 18237 19472 . - . ID=gene-AB69_RS19430;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AB69_RS19430;old_locus_tag=AB69_0542 NZ_JHDO01000059.1 Protein Homology CDS 18237 19472 . - 0 ID=cds-WP_032230875.1;Parent=gene-AB69_RS19430;Dbxref=GenBank:WP_032230875.1;Name=WP_032230875.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AB69_RS19430;product=allantoate deiminase;protein_id=WP_032230875.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 19494 20543 . - . ID=gene-AB69_RS19425;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AB69_RS19425;old_locus_tag=AB69_0543 NZ_JHDO01000059.1 Protein Homology CDS 19494 20543 . - 0 ID=cds-WP_000703900.1;Parent=gene-AB69_RS19425;Dbxref=GenBank:WP_000703900.1;Name=WP_000703900.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415050.1;locus_tag=AB69_RS19425;product=ureidoglycolate dehydrogenase;protein_id=WP_000703900.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 20860 22527 . + . ID=gene-AB69_RS19420;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB69_RS19420;old_locus_tag=AB69_0544 NZ_JHDO01000059.1 Protein Homology CDS 20860 22527 . + 0 ID=cds-WP_000580840.1;Parent=gene-AB69_RS19420;Dbxref=GenBank:WP_000580840.1;Name=WP_000580840.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AB69_RS19420;product=acyl-CoA synthetase FdrA;protein_id=WP_000580840.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 22537 23796 . + . ID=gene-AB69_RS19415;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AB69_RS19415;old_locus_tag=AB69_0545 NZ_JHDO01000059.1 Protein Homology CDS 22537 23796 . + 0 ID=cds-WP_000495402.1;Parent=gene-AB69_RS19415;Dbxref=GenBank:WP_000495402.1;Name=WP_000495402.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AB69_RS19415;product=DUF1116 domain-containing protein;protein_id=WP_000495402.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 23807 24622 . + . ID=gene-AB69_RS19410;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AB69_RS19410;old_locus_tag=AB69_0546 NZ_JHDO01000059.1 Protein Homology CDS 23807 24622 . + 0 ID=cds-WP_000152517.1;Parent=gene-AB69_RS19410;Dbxref=GenBank:WP_000152517.1;Name=WP_000152517.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AB69_RS19410;product=DUF2877 domain-containing protein;protein_id=WP_000152517.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 24619 25512 . + . ID=gene-AB69_RS19405;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AB69_RS19405;old_locus_tag=AB69_0547 NZ_JHDO01000059.1 Protein Homology CDS 24619 25512 . + 0 ID=cds-WP_032182327.1;Parent=gene-AB69_RS19405;Dbxref=GenBank:WP_032182327.1;Name=WP_032182327.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AB69_RS19405;product=carbamate kinase;protein_id=WP_032182327.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 25707 26774 . - . ID=gene-AB69_RS19400;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AB69_RS19400;old_locus_tag=AB69_0548 NZ_JHDO01000059.1 Protein Homology CDS 25707 26774 . - 0 ID=cds-WP_000815524.1;Parent=gene-AB69_RS19400;Dbxref=GenBank:WP_000815524.1;Name=WP_000815524.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AB69_RS19400;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815524.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 26771 27280 . - . ID=gene-AB69_RS19395;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AB69_RS19395;old_locus_tag=AB69_0549 NZ_JHDO01000059.1 Protein Homology CDS 26771 27280 . - 0 ID=cds-WP_001295318.1;Parent=gene-AB69_RS19395;Dbxref=GenBank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AB69_RS19395;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 27398 28120 . - . ID=gene-AB69_RS19390;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AB69_RS19390;old_locus_tag=AB69_0550 NZ_JHDO01000059.1 Protein Homology CDS 27398 28120 . - 0 ID=cds-WP_000212253.1;Parent=gene-AB69_RS19390;Dbxref=GenBank:WP_000212253.1;Name=WP_000212253.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415057.1;locus_tag=AB69_RS19390;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212253.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 28123 28617 . - . ID=gene-AB69_RS19385;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AB69_RS19385;old_locus_tag=AB69_0551 NZ_JHDO01000059.1 Protein Homology CDS 28123 28617 . - 0 ID=cds-WP_000256002.1;Parent=gene-AB69_RS19385;Dbxref=GenBank:WP_000256002.1;Name=WP_000256002.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AB69_RS19385;product=peptidylprolyl isomerase B;protein_id=WP_000256002.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 28791 30176 . + . ID=gene-AB69_RS19380;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AB69_RS19380;old_locus_tag=AB69_0552 NZ_JHDO01000059.1 Protein Homology CDS 28791 30176 . + 0 ID=cds-WP_000912347.1;Parent=gene-AB69_RS19380;Dbxref=GenBank:WP_000912347.1;Name=WP_000912347.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AB69_RS19380;product=cysteine--tRNA ligase;protein_id=WP_000912347.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 30212 30733 . - . ID=gene-AB69_RS19375;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AB69_RS19375;old_locus_tag=AB69_0553 NZ_JHDO01000059.1 Protein Homology CDS 30212 30733 . - 0 ID=cds-WP_001143535.1;Parent=gene-AB69_RS19375;Dbxref=GenBank:WP_001143535.1;Name=WP_001143535.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415060.1;locus_tag=AB69_RS19375;product=metal-dependent hydrolase;protein_id=WP_001143535.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 30841 31053 . - . ID=gene-AB69_RS19370;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AB69_RS19370;old_locus_tag=AB69_0554 NZ_JHDO01000059.1 Protein Homology CDS 30841 31053 . - 0 ID=cds-WP_000190288.1;Parent=gene-AB69_RS19370;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AB69_RS19370;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 31055 31921 . - . ID=gene-AB69_RS19365;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AB69_RS19365;old_locus_tag=AB69_0555 NZ_JHDO01000059.1 Protein Homology CDS 31055 31921 . - 0 ID=cds-WP_000729155.1;Parent=gene-AB69_RS19365;Dbxref=GenBank:WP_000729155.1;Name=WP_000729155.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308618.1;locus_tag=AB69_RS19365;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729155.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 32401 32943 . + . ID=gene-AB69_RS19360;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB69_RS19360;old_locus_tag=AB69_0556 NZ_JHDO01000059.1 Protein Homology CDS 32401 32943 . + 0 ID=cds-WP_000776555.1;Parent=gene-AB69_RS19360;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AB69_RS19360;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 33163 33855 . + . ID=gene-AB69_RS19355;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB69_RS19355;old_locus_tag=AB69_0557 NZ_JHDO01000059.1 Protein Homology CDS 33163 33855 . + 0 ID=cds-WP_000988364.1;Parent=gene-AB69_RS19355;Dbxref=GenBank:WP_000988364.1;Name=WP_000988364.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AB69_RS19355;product=type 1 fimbria chaperone FimC;protein_id=WP_000988364.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 33886 36495 . + . ID=gene-AB69_RS19350;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=protein_coding;locus_tag=AB69_RS19350;old_locus_tag=AB69_0558 NZ_JHDO01000059.1 Protein Homology CDS 33886 36495 . + 0 ID=cds-WP_001310622.1;Parent=gene-AB69_RS19350;Dbxref=GenBank:WP_001310622.1;Name=WP_001310622.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AB69_RS19350;product=fimbrial biogenesis usher protein;protein_id=WP_001310622.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 36508 37515 . + . ID=gene-AB69_RS19345;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB69_RS19345;old_locus_tag=AB69_0560 NZ_JHDO01000059.1 Protein Homology CDS 36508 37515 . + 0 ID=cds-WP_000691056.1;Parent=gene-AB69_RS19345;Dbxref=GenBank:WP_000691056.1;Name=WP_000691056.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AB69_RS19345;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000691056.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 37526 38041 . + . ID=gene-AB69_RS0123610;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AB69_RS0123610 NZ_JHDO01000059.1 Protein Homology CDS 37526 38041 . + 0 ID=cds-WP_001255230.1;Parent=gene-AB69_RS0123610;Dbxref=GenBank:WP_001255230.1;Name=WP_001255230.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AB69_RS0123610;product=fimbria assembly protein;protein_id=WP_001255230.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 38044 38661 . - . ID=gene-AB69_RS19340;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AB69_RS19340;old_locus_tag=AB69_0562 NZ_JHDO01000059.1 Protein Homology CDS 38044 38661 . - 0 ID=cds-WP_001438665.1;Parent=gene-AB69_RS19340;Dbxref=GenBank:WP_001438665.1;Name=WP_001438665.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AB69_RS19340;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_001438665.1;transl_table=11 NZ_JHDO01000059.1 RefSeq gene 38766 39044 . + . ID=gene-AB69_RS19335;Name=AB69_RS19335;end_range=39044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS19335;old_locus_tag=AB69_0563;partial=true NZ_JHDO01000059.1 Protein Homology CDS 38766 39044 . + 0 ID=cds-WP_000567733.1;Parent=gene-AB69_RS19335;Dbxref=GenBank:WP_000567733.1;Name=WP_000567733.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=39044,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS19335;partial=true;product=transposase;protein_id=WP_000567733.1;transl_table=11 ##sequence-region NZ_JHDO01000060.1 1 26973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000060.1 RefSeq region 1 26973 . + . ID=NZ_JHDO01000060.1:1..26973;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000060.1 RefSeq pseudogene 1 272 . - . ID=gene-AB69_RS0123615;Name=AB69_RS0123615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123615;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000060.1 Protein Homology CDS 1 272 . - 0 ID=cds-AB69_RS0123615;Parent=gene-AB69_RS0123615;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AB69_RS0123615;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000060.1 RefSeq pseudogene 422 634 . + . ID=gene-AB69_RS30190;Name=AB69_RS30190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30190;old_locus_tag=AB69_0564;partial=true;pseudo=true;start_range=.,422 NZ_JHDO01000060.1 Protein Homology CDS 422 634 . + 0 ID=cds-AB69_RS30190;Parent=gene-AB69_RS30190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AB69_RS30190;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,422;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 818 2302 . - . ID=gene-AB69_RS19325;Name=AB69_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS19325;old_locus_tag=AB69_0565 NZ_JHDO01000060.1 Protein Homology CDS 818 2302 . - 0 ID=cds-WP_032230883.1;Parent=gene-AB69_RS19325;Dbxref=GenBank:WP_032230883.1;Name=WP_032230883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309689.1;locus_tag=AB69_RS19325;product=alpha/beta hydrolase;protein_id=WP_032230883.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 2489 3442 . - . ID=gene-AB69_RS19320;Name=ompT;gbkey=Gene;gene=ompT;gene_biotype=protein_coding;locus_tag=AB69_RS19320;old_locus_tag=AB69_0566 NZ_JHDO01000060.1 Protein Homology CDS 2489 3442 . - 0 ID=cds-WP_001201825.1;Parent=gene-AB69_RS19320;Dbxref=GenBank:WP_001201825.1;Name=WP_001201825.1;gbkey=CDS;gene=ompT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309690.1;locus_tag=AB69_RS19320;product=omptin family outer membrane protease OmpT;protein_id=WP_001201825.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 3955 4716 . - . ID=gene-AB69_RS19315;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AB69_RS19315;old_locus_tag=AB69_0568 NZ_JHDO01000060.1 Protein Homology CDS 3955 4716 . - 0 ID=cds-WP_032230885.1;Parent=gene-AB69_RS19315;Dbxref=GenBank:WP_032230885.1;Name=WP_032230885.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415098.1;locus_tag=AB69_RS19315;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_032230885.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 4899 5789 . - . ID=gene-AB69_RS19310;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AB69_RS19310;old_locus_tag=AB69_0569 NZ_JHDO01000060.1 Protein Homology CDS 4899 5789 . - 0 ID=cds-WP_001224604.1;Parent=gene-AB69_RS19310;Dbxref=GenBank:WP_001224604.1;Name=WP_001224604.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415099.1;locus_tag=AB69_RS19310;product=DUF4434 family protein;protein_id=WP_001224604.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 5790 8762 . - . ID=gene-AB69_RS19305;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AB69_RS19305;old_locus_tag=AB69_0570 NZ_JHDO01000060.1 Protein Homology CDS 5790 8762 . - 0 ID=cds-WP_032230886.1;Parent=gene-AB69_RS19305;Dbxref=GenBank:WP_032230886.1;Name=WP_032230886.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AB69_RS19305;product=bacteriophage adsorption protein NfrA;protein_id=WP_032230886.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 8749 10986 . - . ID=gene-AB69_RS19300;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AB69_RS19300;old_locus_tag=AB69_0571 NZ_JHDO01000060.1 Protein Homology CDS 8749 10986 . - 0 ID=cds-WP_000383932.1;Parent=gene-AB69_RS19300;Dbxref=GenBank:WP_000383932.1;Name=WP_000383932.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AB69_RS19300;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;protein_id=WP_000383932.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 11136 12578 . - . ID=gene-AB69_RS19295;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AB69_RS19295;old_locus_tag=AB69_0572 NZ_JHDO01000060.1 Protein Homology CDS 11136 12578 . - 0 ID=cds-WP_000253842.1;Parent=gene-AB69_RS19295;Dbxref=GenBank:WP_000253842.1;Name=WP_000253842.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415102.1;locus_tag=AB69_RS19295;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253842.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 12568 13251 . - . ID=gene-AB69_RS19290;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AB69_RS19290;old_locus_tag=AB69_0573 NZ_JHDO01000060.1 Protein Homology CDS 12568 13251 . - 0 ID=cds-WP_000770953.1;Parent=gene-AB69_RS19290;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AB69_RS19290;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 13408 14787 . + . ID=gene-AB69_RS19285;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AB69_RS19285;old_locus_tag=AB69_0574 NZ_JHDO01000060.1 Protein Homology CDS 13408 14787 . + 0 ID=cds-WP_000074244.1;Parent=gene-AB69_RS19285;Dbxref=GenBank:WP_000074244.1;Name=WP_000074244.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074244.1;locus_tag=AB69_RS19285;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074244.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 14814 15146 . + . ID=gene-AB69_RS19280;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AB69_RS19280;old_locus_tag=AB69_0575 NZ_JHDO01000060.1 Protein Homology CDS 14814 15146 . + 0 ID=cds-WP_000709880.1;Parent=gene-AB69_RS19280;Dbxref=GenBank:WP_000709880.1;Name=WP_000709880.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706420.1;locus_tag=AB69_RS19280;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709880.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 15162 16385 . + . ID=gene-AB69_RS19275;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AB69_RS19275;old_locus_tag=AB69_0576 NZ_JHDO01000060.1 Protein Homology CDS 15162 16385 . + 0 ID=cds-WP_032230887.1;Parent=gene-AB69_RS19275;Dbxref=GenBank:WP_032230887.1;Name=WP_032230887.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308639.1;locus_tag=AB69_RS19275;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_032230887.1;transl_table=11 NZ_JHDO01000060.1 RefSeq pseudogene 16397 19541 . + . ID=gene-AB69_RS0123625;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=pseudogene;locus_tag=AB69_RS0123625;old_locus_tag=AB69_0578;pseudo=true NZ_JHDO01000060.1 Protein Homology CDS 16397 19541 . + 0 ID=cds-AB69_RS0123625;Parent=gene-AB69_RS0123625;Note=frameshifted;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AB69_RS0123625;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;pseudo=true;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 19643 21019 . + . ID=gene-AB69_RS19270;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AB69_RS19270;old_locus_tag=AB69_0579 NZ_JHDO01000060.1 Protein Homology CDS 19643 21019 . + 0 ID=cds-WP_000786319.1;Parent=gene-AB69_RS19270;Dbxref=GenBank:WP_000786319.1;Name=WP_000786319.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AB69_RS19270;product=phenylalanine transporter;protein_id=WP_000786319.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 21100 22347 . - . ID=gene-AB69_RS19265;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AB69_RS19265;old_locus_tag=AB69_0580 NZ_JHDO01000060.1 Protein Homology CDS 21100 22347 . - 0 ID=cds-WP_001153148.1;Parent=gene-AB69_RS19265;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AB69_RS19265;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 22455 23108 . - . ID=gene-AB69_RS19260;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AB69_RS19260;old_locus_tag=AB69_0581 NZ_JHDO01000060.1 Protein Homology CDS 22455 23108 . - 0 ID=cds-WP_000351487.1;Parent=gene-AB69_RS19260;Dbxref=GenBank:WP_000351487.1;Name=WP_000351487.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415110.1;locus_tag=AB69_RS19260;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351487.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 23202 23570 . - . ID=gene-AB69_RS19255;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=AB69_RS19255;old_locus_tag=AB69_0582 NZ_JHDO01000060.1 Protein Homology CDS 23202 23570 . - 0 ID=cds-WP_000360951.1;Parent=gene-AB69_RS19255;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AB69_RS19255;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 23635 23883 . - . ID=gene-AB69_RS19250;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=AB69_RS19250;old_locus_tag=AB69_0583 NZ_JHDO01000060.1 Protein Homology CDS 23635 23883 . - 0 ID=cds-WP_000682509.1;Parent=gene-AB69_RS19250;Dbxref=GenBank:WP_000682509.1;Name=WP_000682509.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415112.1;locus_tag=AB69_RS19250;product=DUF1158 domain-containing protein;protein_id=WP_000682509.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 23949 25067 . - . ID=gene-AB69_RS19245;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=AB69_RS19245;old_locus_tag=AB69_0584 NZ_JHDO01000060.1 Protein Homology CDS 23949 25067 . - 0 ID=cds-WP_001130654.1;Parent=gene-AB69_RS19245;Dbxref=GenBank:WP_001130654.1;Name=WP_001130654.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AB69_RS19245;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130654.1;transl_table=11 NZ_JHDO01000060.1 RefSeq pseudogene 25283 25551 . - . ID=gene-AB69_RS30695;Name=AB69_RS30695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30695;pseudo=true NZ_JHDO01000060.1 Protein Homology CDS 25283 25551 . - 0 ID=cds-AB69_RS30695;Parent=gene-AB69_RS30695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AB69_RS30695;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 25520 25672 . + . ID=gene-AB69_RS19240;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AB69_RS19240;old_locus_tag=AB69_0585 NZ_JHDO01000060.1 Protein Homology CDS 25520 25672 . + 0 ID=cds-WP_000956455.1;Parent=gene-AB69_RS19240;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AB69_RS19240;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JHDO01000060.1 RefSeq gene 25749 26861 . + . ID=gene-AB69_RS19235;Name=AB69_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS19235;old_locus_tag=AB69_0586 NZ_JHDO01000060.1 Protein Homology CDS 25749 26861 . + 0 ID=cds-WP_001300563.1-2;Parent=gene-AB69_RS19235;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS19235;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDO01000061.1 1 87985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000061.1 RefSeq region 1 87985 . + . ID=NZ_JHDO01000061.1:1..87985;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000061.1 RefSeq gene 29 1141 . + . ID=gene-AB69_RS19230;Name=AB69_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS19230;old_locus_tag=AB69_0587 NZ_JHDO01000061.1 Protein Homology CDS 29 1141 . + 0 ID=cds-WP_001300563.1-3;Parent=gene-AB69_RS19230;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS19230;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 1423 2043 . - . ID=gene-AB69_RS19225;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AB69_RS19225;old_locus_tag=AB69_0589 NZ_JHDO01000061.1 Protein Homology CDS 1423 2043 . - 0 ID=cds-WP_001749708.1;Parent=gene-AB69_RS19225;Dbxref=GenBank:WP_001749708.1;Name=WP_001749708.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AB69_RS19225;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 2218 4458 . - . ID=gene-AB69_RS19220;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AB69_RS19220;old_locus_tag=AB69_0590 NZ_JHDO01000061.1 Protein Homology CDS 2218 4458 . - 0 ID=cds-WP_001034916.1;Parent=gene-AB69_RS19220;Dbxref=GenBank:WP_001034916.1;Name=WP_001034916.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AB69_RS19220;product=siderophore enterobactin receptor FepA;protein_id=WP_001034916.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 4701 5903 . + . ID=gene-AB69_RS19215;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AB69_RS19215;old_locus_tag=AB69_0592 NZ_JHDO01000061.1 Protein Homology CDS 4701 5903 . + 0 ID=cds-WP_000125843.1;Parent=gene-AB69_RS19215;Dbxref=GenBank:WP_000125843.1;Name=WP_000125843.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415117.2;locus_tag=AB69_RS19215;product=enterochelin esterase;protein_id=WP_000125843.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 5906 6124 . + . ID=gene-AB69_RS19210;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AB69_RS19210;old_locus_tag=AB69_0593 NZ_JHDO01000061.1 Protein Homology CDS 5906 6124 . + 0 ID=cds-WP_000885798.1;Parent=gene-AB69_RS19210;Dbxref=GenBank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AB69_RS19210;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 6121 10002 . + . ID=gene-AB69_RS19205;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AB69_RS19205;old_locus_tag=AB69_0594 NZ_JHDO01000061.1 Protein Homology CDS 6121 10002 . + 0 ID=cds-WP_032230893.1;Parent=gene-AB69_RS19205;Dbxref=GenBank:WP_032230893.1;Name=WP_032230893.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AB69_RS19205;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032230893.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 10218 11351 . + . ID=gene-AB69_RS19200;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AB69_RS19200;old_locus_tag=AB69_0596 NZ_JHDO01000061.1 Protein Homology CDS 10218 11351 . + 0 ID=cds-WP_000096692.1;Parent=gene-AB69_RS19200;Dbxref=GenBank:WP_000096692.1;Name=WP_000096692.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AB69_RS19200;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_000096692.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 11348 12163 . - . ID=gene-AB69_RS19195;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AB69_RS19195;old_locus_tag=AB69_0597 NZ_JHDO01000061.1 Protein Homology CDS 11348 12163 . - 0 ID=cds-WP_000140647.1;Parent=gene-AB69_RS19195;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AB69_RS19195;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 12160 13152 . - . ID=gene-AB69_RS19190;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AB69_RS19190;old_locus_tag=AB69_0598 NZ_JHDO01000061.1 Protein Homology CDS 12160 13152 . - 0 ID=cds-WP_000640988.1;Parent=gene-AB69_RS19190;Dbxref=GenBank:WP_000640988.1;Name=WP_000640988.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AB69_RS19190;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640988.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 13149 14153 . - . ID=gene-AB69_RS19185;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AB69_RS19185;old_locus_tag=AB69_0599 NZ_JHDO01000061.1 Protein Homology CDS 13149 14153 . - 0 ID=cds-WP_000016947.1;Parent=gene-AB69_RS19185;Dbxref=GenBank:WP_000016947.1;Name=WP_000016947.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415122.1;locus_tag=AB69_RS19185;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_000016947.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 14264 15514 . + . ID=gene-AB69_RS19180;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AB69_RS19180;old_locus_tag=AB69_0600 NZ_JHDO01000061.1 Protein Homology CDS 14264 15514 . + 0 ID=cds-WP_001041786.1;Parent=gene-AB69_RS19180;Dbxref=GenBank:WP_001041786.1;Name=WP_001041786.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AB69_RS19180;product=enterobactin transporter EntS;protein_id=WP_001041786.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 15518 16474 . - . ID=gene-AB69_RS19175;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AB69_RS19175;old_locus_tag=AB69_0601 NZ_JHDO01000061.1 Protein Homology CDS 15518 16474 . - 0 ID=cds-WP_001234311.1;Parent=gene-AB69_RS19175;Dbxref=GenBank:WP_001234311.1;Name=WP_001234311.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AB69_RS19175;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234311.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 16849 18024 . + . ID=gene-AB69_RS19170;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AB69_RS19170;old_locus_tag=AB69_0602 NZ_JHDO01000061.1 Protein Homology CDS 16849 18024 . + 0 ID=cds-WP_000381303.1;Parent=gene-AB69_RS19170;Dbxref=GenBank:WP_000381303.1;Name=WP_000381303.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AB69_RS19170;product=isochorismate synthase EntC;protein_id=WP_000381303.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 18034 19644 . + . ID=gene-AB69_RS19165;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AB69_RS19165;old_locus_tag=AB69_0603 NZ_JHDO01000061.1 Protein Homology CDS 18034 19644 . + 0 ID=cds-WP_000026812.1;Parent=gene-AB69_RS19165;Dbxref=GenBank:WP_000026812.1;Name=WP_000026812.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AB69_RS19165;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026812.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 19658 20515 . + . ID=gene-AB69_RS19160;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AB69_RS19160;old_locus_tag=AB69_0604 NZ_JHDO01000061.1 Protein Homology CDS 19658 20515 . + 0 ID=cds-WP_001007138.1;Parent=gene-AB69_RS19160;Dbxref=GenBank:WP_001007138.1;Name=WP_001007138.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AB69_RS19160;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007138.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 20515 21261 . + . ID=gene-AB69_RS19155;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AB69_RS19155;old_locus_tag=AB69_0605 NZ_JHDO01000061.1 Protein Homology CDS 20515 21261 . + 0 ID=cds-WP_000347651.1;Parent=gene-AB69_RS19155;Dbxref=GenBank:WP_000347651.1;Name=WP_000347651.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415128.1;locus_tag=AB69_RS19155;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347651.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 21264 21677 . + . ID=gene-AB69_RS19150;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AB69_RS19150;old_locus_tag=AB69_0606 NZ_JHDO01000061.1 Protein Homology CDS 21264 21677 . + 0 ID=cds-WP_000637953.1;Parent=gene-AB69_RS19150;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AB69_RS19150;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 21858 23963 . + . ID=gene-AB69_RS19145;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AB69_RS19145;old_locus_tag=AB69_0607 NZ_JHDO01000061.1 Protein Homology CDS 21858 23963 . + 0 ID=cds-WP_001043156.1;Parent=gene-AB69_RS19145;Dbxref=GenBank:WP_001043156.1;Name=WP_001043156.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AB69_RS19145;product=pyruvate/proton symporter CstA;protein_id=WP_001043156.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 24146 24343 . + . ID=gene-AB69_RS19140;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AB69_RS19140;old_locus_tag=AB69_0608 NZ_JHDO01000061.1 Protein Homology CDS 24146 24343 . + 0 ID=cds-WP_000460431.1;Parent=gene-AB69_RS19140;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AB69_RS19140;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 24353 25441 . - . ID=gene-AB69_RS19135;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AB69_RS19135;old_locus_tag=AB69_0609 NZ_JHDO01000061.1 Protein Homology CDS 24353 25441 . - 0 ID=cds-WP_001120441.1;Parent=gene-AB69_RS19135;Dbxref=GenBank:WP_001120441.1;Name=WP_001120441.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415132.1;locus_tag=AB69_RS19135;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120441.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 25550 26710 . + . ID=gene-AB69_RS19130;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AB69_RS19130;old_locus_tag=AB69_0610 NZ_JHDO01000061.1 Protein Homology CDS 25550 26710 . + 0 ID=cds-WP_032230894.1;Parent=gene-AB69_RS19130;Dbxref=GenBank:WP_032230894.1;Name=WP_032230894.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AB69_RS19130;product=methionine-oxo-acid transaminase;protein_id=WP_032230894.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 26711 27340 . - . ID=gene-AB69_RS19125;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AB69_RS19125;old_locus_tag=AB69_0611 NZ_JHDO01000061.1 Protein Homology CDS 26711 27340 . - 0 ID=cds-WP_000502945.1;Parent=gene-AB69_RS19125;Dbxref=GenBank:WP_000502945.1;Name=WP_000502945.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AB69_RS19125;product=IbrB-like domain-containing protein;protein_id=WP_000502945.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 27313 28533 . - . ID=gene-AB69_RS19120;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AB69_RS19120;old_locus_tag=AB69_0612 NZ_JHDO01000061.1 Protein Homology CDS 27313 28533 . - 0 ID=cds-WP_000029825.1;Parent=gene-AB69_RS19120;Dbxref=GenBank:WP_000029825.1;Name=WP_000029825.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AB69_RS19120;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029825.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 28680 29582 . - . ID=gene-AB69_RS19115;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AB69_RS19115;old_locus_tag=AB69_0613 NZ_JHDO01000061.1 Protein Homology CDS 28680 29582 . - 0 ID=cds-WP_032230895.1;Parent=gene-AB69_RS19115;Dbxref=GenBank:WP_032230895.1;Name=WP_032230895.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AB69_RS19115;product=DNA-binding transcriptional repressor CitR;protein_id=WP_032230895.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 29791 30537 . - . ID=gene-AB69_RS19110;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AB69_RS19110;old_locus_tag=AB69_0614 NZ_JHDO01000061.1 Protein Homology CDS 29791 30537 . - 0 ID=cds-WP_024211175.1;Parent=gene-AB69_RS19110;Dbxref=GenBank:WP_024211175.1;Name=WP_024211175.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AB69_RS19110;product=thiol:disulfide interchange protein DsbG;protein_id=WP_024211175.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 30909 31472 . + . ID=gene-AB69_RS19105;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AB69_RS19105;old_locus_tag=AB69_0615 NZ_JHDO01000061.1 Protein Homology CDS 30909 31472 . + 0 ID=cds-WP_000052796.1;Parent=gene-AB69_RS19105;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AB69_RS19105;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 31717 33282 . + . ID=gene-AB69_RS19100;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AB69_RS19100;old_locus_tag=AB69_0617 NZ_JHDO01000061.1 Protein Homology CDS 31717 33282 . + 0 ID=cds-WP_000887629.1;Parent=gene-AB69_RS19100;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AB69_RS19100;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 33403 33831 . - . ID=gene-AB69_RS19095;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AB69_RS19095;old_locus_tag=AB69_0618 NZ_JHDO01000061.1 Protein Homology CDS 33403 33831 . - 0 ID=cds-WP_000278509.1;Parent=gene-AB69_RS19095;Dbxref=GenBank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AB69_RS19095;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 34052 35290 . + . ID=gene-AB69_RS19090;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AB69_RS19090;old_locus_tag=AB69_0619 NZ_JHDO01000061.1 Protein Homology CDS 34052 35290 . + 0 ID=cds-WP_000646173.1;Parent=gene-AB69_RS19090;Dbxref=GenBank:WP_000646173.1;Name=WP_000646173.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415141.1;locus_tag=AB69_RS19090;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646173.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 35294 35383 . - . ID=gene-AB69_RS30545;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AB69_RS30545 NZ_JHDO01000061.1 Protein Homology CDS 35294 35383 . - 0 ID=cds-WP_000796528.1;Parent=gene-AB69_RS30545;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AB69_RS30545;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 35521 35931 . - . ID=gene-AB69_RS19085;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AB69_RS19085;old_locus_tag=AB69_0621 NZ_JHDO01000061.1 Protein Homology CDS 35521 35931 . - 0 ID=cds-WP_000089731.1;Parent=gene-AB69_RS19085;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AB69_RS19085;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 36161 36967 . - . ID=gene-AB69_RS19080;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AB69_RS19080;old_locus_tag=AB69_0622 NZ_JHDO01000061.1 Protein Homology CDS 36161 36967 . - 0 ID=cds-WP_000643397.1;Parent=gene-AB69_RS19080;Dbxref=GenBank:WP_000643397.1;Name=WP_000643397.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AB69_RS19080;product=ribonuclease I;protein_id=WP_000643397.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 37081 38544 . - . ID=gene-AB69_RS19075;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AB69_RS19075;old_locus_tag=AB69_0623 NZ_JHDO01000061.1 Protein Homology CDS 37081 38544 . - 0 ID=cds-WP_000050323.1;Parent=gene-AB69_RS19075;Dbxref=GenBank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AB69_RS19075;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 38595 39473 . - . ID=gene-AB69_RS19070;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AB69_RS19070;old_locus_tag=AB69_0624 NZ_JHDO01000061.1 Protein Homology CDS 38595 39473 . - 0 ID=cds-WP_000062457.1;Parent=gene-AB69_RS19070;Dbxref=GenBank:WP_000062457.1;Name=WP_000062457.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AB69_RS19070;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062457.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 39448 39999 . - . ID=gene-AB69_RS19065;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AB69_RS19065;old_locus_tag=AB69_0625 NZ_JHDO01000061.1 Protein Homology CDS 39448 39999 . - 0 ID=cds-WP_000550422.1;Parent=gene-AB69_RS19065;Dbxref=GenBank:WP_000550422.1;Name=WP_000550422.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AB69_RS19065;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550422.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 40003 41535 . - . ID=gene-AB69_RS19060;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AB69_RS19060;old_locus_tag=AB69_0626 NZ_JHDO01000061.1 Protein Homology CDS 40003 41535 . - 0 ID=cds-WP_000192245.1;Parent=gene-AB69_RS19060;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AB69_RS19060;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 41546 42454 . - . ID=gene-AB69_RS19055;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AB69_RS19055;old_locus_tag=AB69_0627 NZ_JHDO01000061.1 Protein Homology CDS 41546 42454 . - 0 ID=cds-WP_000622357.1;Parent=gene-AB69_RS19055;Dbxref=GenBank:WP_000622357.1;Name=WP_000622357.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AB69_RS19055;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622357.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 42451 42747 . - . ID=gene-AB69_RS19050;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AB69_RS19050;old_locus_tag=AB69_0628 NZ_JHDO01000061.1 Protein Homology CDS 42451 42747 . - 0 ID=cds-WP_000700703.1;Parent=gene-AB69_RS19050;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AB69_RS19050;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 42762 43820 . - . ID=gene-AB69_RS19045;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AB69_RS19045;old_locus_tag=AB69_0629 NZ_JHDO01000061.1 Protein Homology CDS 42762 43820 . - 0 ID=cds-WP_000467705.1;Parent=gene-AB69_RS19045;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AB69_RS19045;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 44199 45857 . + . ID=gene-AB69_RS19040;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AB69_RS19040;old_locus_tag=AB69_0630 NZ_JHDO01000061.1 Protein Homology CDS 44199 45857 . + 0 ID=cds-WP_000939767.1;Parent=gene-AB69_RS19040;Dbxref=GenBank:WP_000939767.1;Name=WP_000939767.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AB69_RS19040;product=sensor histidine kinase DpiB;protein_id=WP_000939767.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 45826 46506 . + . ID=gene-AB69_RS19035;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AB69_RS19035;old_locus_tag=AB69_0631 NZ_JHDO01000061.1 Protein Homology CDS 45826 46506 . + 0 ID=cds-WP_000126500.1;Parent=gene-AB69_RS19035;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AB69_RS19035;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 46547 47932 . - . ID=gene-AB69_RS19030;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB69_RS19030;old_locus_tag=AB69_0632 NZ_JHDO01000061.1 Protein Homology CDS 46547 47932 . - 0 ID=cds-WP_000955063.1;Parent=gene-AB69_RS19030;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AB69_RS19030;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 48521 49081 . + . ID=gene-AB69_RS19025;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AB69_RS19025;old_locus_tag=AB69_0634 NZ_JHDO01000061.1 Protein Homology CDS 48521 49081 . + 0 ID=cds-WP_001103094.1;Parent=gene-AB69_RS19025;Dbxref=GenBank:WP_001103094.1;Name=WP_001103094.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AB69_RS19025;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 49256 49465 . + . ID=gene-AB69_RS19020;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB69_RS19020;old_locus_tag=AB69_0635 NZ_JHDO01000061.1 Protein Homology CDS 49256 49465 . + 0 ID=cds-WP_000034825.1;Parent=gene-AB69_RS19020;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AB69_RS19020;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 49519 49902 . - . ID=gene-AB69_RS19015;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AB69_RS19015;old_locus_tag=AB69_0636 NZ_JHDO01000061.1 Protein Homology CDS 49519 49902 . - 0 ID=cds-WP_000939747.1;Parent=gene-AB69_RS19015;Dbxref=GenBank:WP_000939747.1;Name=WP_000939747.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415157.1;locus_tag=AB69_RS19015;product=fluoride efflux transporter CrcB;protein_id=WP_000939747.1;transl_table=11 NZ_JHDO01000061.1 RefSeq pseudogene 49995 50782 . + . ID=gene-AB69_RS0123640;Name=AB69_RS0123640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123640;old_locus_tag=AB69_0638;pseudo=true NZ_JHDO01000061.1 Protein Homology CDS 49995 50782 . + 0 ID=cds-AB69_RS0123640;Parent=gene-AB69_RS0123640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AB69_RS0123640;product=deaminated glutathione amidase;pseudo=true;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 50911 51114 . + . ID=gene-AB69_RS19010;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AB69_RS19010;old_locus_tag=AB69_0639 NZ_JHDO01000061.1 Protein Homology CDS 50911 51114 . + 0 ID=cds-WP_000503931.1;Parent=gene-AB69_RS19010;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AB69_RS19010;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 51215 52180 . - . ID=gene-AB69_RS19005;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AB69_RS19005;old_locus_tag=AB69_0640 NZ_JHDO01000061.1 Protein Homology CDS 51215 52180 . - 0 ID=cds-WP_000042632.1;Parent=gene-AB69_RS19005;Dbxref=GenBank:WP_000042632.1;Name=WP_000042632.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AB69_RS19005;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 52389 53342 . - . ID=gene-AB69_RS19000;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AB69_RS19000;old_locus_tag=AB69_0641 NZ_JHDO01000061.1 Protein Homology CDS 52389 53342 . - 0 ID=cds-WP_000378026.1;Parent=gene-AB69_RS19000;Dbxref=GenBank:WP_000378026.1;Name=WP_000378026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AB69_RS19000;product=YbeF family transcriptional regulator;protein_id=WP_000378026.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 53601 54242 . - . ID=gene-AB69_RS18995;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AB69_RS18995;old_locus_tag=AB69_0642 NZ_JHDO01000061.1 Protein Homology CDS 53601 54242 . - 0 ID=cds-WP_000284027.1;Parent=gene-AB69_RS18995;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AB69_RS18995;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 54343 54606 . - . ID=gene-AB69_RS18990;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AB69_RS18990;old_locus_tag=AB69_0643 NZ_JHDO01000061.1 Protein Homology CDS 54343 54606 . - 0 ID=cds-WP_000850550.1;Parent=gene-AB69_RS18990;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AB69_RS18990;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 54716 55927 . - . ID=gene-AB69_RS18985;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AB69_RS18985;old_locus_tag=AB69_0644 NZ_JHDO01000061.1 Protein Homology CDS 54716 55927 . - 0 ID=cds-WP_001092082.1;Parent=gene-AB69_RS18985;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AB69_RS18985;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 56066 57154 . - . ID=gene-AB69_RS18980;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AB69_RS18980;old_locus_tag=AB69_0646 NZ_JHDO01000061.1 Protein Homology CDS 56066 57154 . - 0 ID=cds-WP_001231430.1;Parent=gene-AB69_RS18980;Dbxref=GenBank:WP_001231430.1;Name=WP_001231430.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AB69_RS18980;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231430.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 57165 58277 . - . ID=gene-AB69_RS18975;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AB69_RS18975;old_locus_tag=AB69_0647 NZ_JHDO01000061.1 Protein Homology CDS 57165 58277 . - 0 ID=cds-WP_000131719.1;Parent=gene-AB69_RS18975;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AB69_RS18975;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 58280 60181 . - . ID=gene-AB69_RS18970;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AB69_RS18970;old_locus_tag=AB69_0648 NZ_JHDO01000061.1 Protein Homology CDS 58280 60181 . - 0 ID=cds-WP_000776191.1;Parent=gene-AB69_RS18970;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AB69_RS18970;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 60212 60679 . - . ID=gene-AB69_RS18965;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AB69_RS18965;old_locus_tag=AB69_0649 NZ_JHDO01000061.1 Protein Homology CDS 60212 60679 . - 0 ID=cds-WP_000776104.1;Parent=gene-AB69_RS18965;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AB69_RS18965;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 60683 61000 . - . ID=gene-AB69_RS18960;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AB69_RS18960;old_locus_tag=AB69_0650 NZ_JHDO01000061.1 Protein Homology CDS 60683 61000 . - 0 ID=cds-WP_001161664.1;Parent=gene-AB69_RS18960;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AB69_RS18960;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 61260 61871 . - . ID=gene-AB69_RS18955;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AB69_RS18955;old_locus_tag=AB69_0651 NZ_JHDO01000061.1 Protein Homology CDS 61260 61871 . - 0 ID=cds-WP_001241872.1;Parent=gene-AB69_RS18955;Dbxref=GenBank:WP_001241872.1;Name=WP_001241872.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415171.1;locus_tag=AB69_RS18955;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241872.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 61895 62536 . - . ID=gene-AB69_RS18950;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AB69_RS18950;old_locus_tag=AB69_0652 NZ_JHDO01000061.1 Protein Homology CDS 61895 62536 . - 0 ID=cds-WP_000838889.1;Parent=gene-AB69_RS18950;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AB69_RS18950;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 62538 63569 . - . ID=gene-AB69_RS18945;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AB69_RS18945;old_locus_tag=AB69_0653 NZ_JHDO01000061.1 Protein Homology CDS 62538 63569 . - 0 ID=cds-WP_032230898.1;Parent=gene-AB69_RS18945;Dbxref=GenBank:WP_032230898.1;Name=WP_032230898.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415173.1;locus_tag=AB69_RS18945;product=DNA polymerase III subunit delta;protein_id=WP_032230898.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 63569 64150 . - . ID=gene-AB69_RS18940;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AB69_RS18940;old_locus_tag=AB69_0654 NZ_JHDO01000061.1 Protein Homology CDS 63569 64150 . - 0 ID=cds-WP_001269673.1;Parent=gene-AB69_RS18940;Dbxref=GenBank:WP_001269673.1;Name=WP_001269673.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AB69_RS18940;product=LPS assembly lipoprotein LptE;protein_id=WP_001269673.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 64165 66747 . - . ID=gene-AB69_RS18935;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AB69_RS18935;old_locus_tag=AB69_0655 NZ_JHDO01000061.1 Protein Homology CDS 64165 66747 . - 0 ID=cds-WP_001340834.1;Parent=gene-AB69_RS18935;Dbxref=GenBank:WP_001340834.1;Name=WP_001340834.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AB69_RS18935;product=leucine--tRNA ligase;protein_id=WP_001340834.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 66982 67464 . + . ID=gene-AB69_RS18930;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AB69_RS18930;old_locus_tag=AB69_0656 NZ_JHDO01000061.1 Protein Homology CDS 66982 67464 . + 0 ID=cds-WP_001044880.1;Parent=gene-AB69_RS18930;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AB69_RS18930;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 67534 68511 . - . ID=gene-AB69_RS18925;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AB69_RS18925;old_locus_tag=AB69_0657 NZ_JHDO01000061.1 Protein Homology CDS 67534 68511 . - 0 ID=cds-WP_000578178.1;Parent=gene-AB69_RS18925;Dbxref=GenBank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AB69_RS18925;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578178.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 68675 69382 . + . ID=gene-AB69_RS18920;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AB69_RS18920;old_locus_tag=AB69_0658 NZ_JHDO01000061.1 Protein Homology CDS 68675 69382 . + 0 ID=cds-WP_000367023.1;Parent=gene-AB69_RS18920;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AB69_RS18920;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 69379 70806 . + . ID=gene-AB69_RS18915;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AB69_RS18915;old_locus_tag=AB69_0659 NZ_JHDO01000061.1 Protein Homology CDS 69379 70806 . + 0 ID=cds-WP_000786572.1;Parent=gene-AB69_RS18915;Dbxref=GenBank:WP_000786572.1;Name=WP_000786572.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AB69_RS18915;product=J domain-containing protein;protein_id=WP_000786572.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 70816 71370 . - . ID=gene-AB69_RS18910;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AB69_RS18910;old_locus_tag=AB69_0660 NZ_JHDO01000061.1 Protein Homology CDS 70816 71370 . - 0 ID=cds-WP_001035673.1;Parent=gene-AB69_RS18910;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AB69_RS18910;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 71472 72179 . + . ID=gene-AB69_RS18905;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AB69_RS18905;old_locus_tag=AB69_0661 NZ_JHDO01000061.1 Protein Homology CDS 71472 72179 . + 0 ID=cds-WP_001030934.1;Parent=gene-AB69_RS18905;Dbxref=GenBank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AB69_RS18905;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 72176 73627 . + . ID=gene-AB69_RS18900;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AB69_RS18900;old_locus_tag=AB69_0662 NZ_JHDO01000061.1 Protein Homology CDS 72176 73627 . + 0 ID=cds-WP_001300403.1;Parent=gene-AB69_RS18900;Dbxref=GenBank:WP_001300403.1;Name=WP_001300403.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AB69_RS18900;product=co-chaperone DjlC;protein_id=WP_001300403.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 73687 75357 . - . ID=gene-AB69_RS18895;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AB69_RS18895;old_locus_tag=AB69_0663 NZ_JHDO01000061.1 Protein Homology CDS 73687 75357 . - 0 ID=cds-WP_000367875.1;Parent=gene-AB69_RS18895;Dbxref=GenBank:WP_000367875.1;Name=WP_000367875.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AB69_RS18895;product=molecular chaperone HscC;protein_id=WP_000367875.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 75441 76376 . - . ID=gene-AB69_RS18890;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AB69_RS18890;old_locus_tag=AB69_0664 NZ_JHDO01000061.1 Protein Homology CDS 75441 76376 . - 0 ID=cds-WP_001207520.1;Parent=gene-AB69_RS18890;Dbxref=GenBank:WP_001207520.1;Name=WP_001207520.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415184.1;locus_tag=AB69_RS18890;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207520.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 76494 77219 . - . ID=gene-AB69_RS18885;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AB69_RS18885;old_locus_tag=AB69_0665 NZ_JHDO01000061.1 Protein Homology CDS 76494 77219 . - 0 ID=cds-WP_000631384.1;Parent=gene-AB69_RS18885;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AB69_RS18885;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 77219 77893 . - . ID=gene-AB69_RS18880;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AB69_RS18880;old_locus_tag=AB69_0666 NZ_JHDO01000061.1 Protein Homology CDS 77219 77893 . - 0 ID=cds-WP_000272824.1;Parent=gene-AB69_RS18880;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AB69_RS18880;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 77893 78633 . - . ID=gene-AB69_RS18875;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AB69_RS18875;old_locus_tag=AB69_0667 NZ_JHDO01000061.1 Protein Homology CDS 77893 78633 . - 0 ID=cds-WP_000020941.1;Parent=gene-AB69_RS18875;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AB69_RS18875;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 78803 79711 . - . ID=gene-AB69_RS18870;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AB69_RS18870;old_locus_tag=AB69_0668 NZ_JHDO01000061.1 Protein Homology CDS 78803 79711 . - 0 ID=cds-WP_001177086.1;Parent=gene-AB69_RS18870;Dbxref=GenBank:WP_001177086.1;Name=WP_001177086.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415188.1;locus_tag=AB69_RS18870;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177086.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 80108 81646 . - . ID=gene-AB69_RS18865;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AB69_RS18865;old_locus_tag=AB69_0670 NZ_JHDO01000061.1 Protein Homology CDS 80108 81646 . - 0 ID=cds-WP_000853021.1;Parent=gene-AB69_RS18865;Dbxref=GenBank:WP_000853021.1;Name=WP_000853021.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AB69_RS18865;product=apolipoprotein N-acyltransferase;protein_id=WP_000853021.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 81671 82549 . - . ID=gene-AB69_RS18860;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AB69_RS18860;old_locus_tag=AB69_0671 NZ_JHDO01000061.1 Protein Homology CDS 81671 82549 . - 0 ID=cds-WP_001278605.1;Parent=gene-AB69_RS18860;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AB69_RS18860;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 82639 83106 . - . ID=gene-AB69_RS18855;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AB69_RS18855;old_locus_tag=AB69_0672 NZ_JHDO01000061.1 Protein Homology CDS 82639 83106 . - 0 ID=cds-WP_000084469.1;Parent=gene-AB69_RS18855;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AB69_RS18855;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 83103 84143 . - . ID=gene-AB69_RS18850;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AB69_RS18850;old_locus_tag=AB69_0673 NZ_JHDO01000061.1 Protein Homology CDS 83103 84143 . - 0 ID=cds-WP_001018040.1;Parent=gene-AB69_RS18850;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AB69_RS18850;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 84296 85720 . - . ID=gene-AB69_RS18845;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AB69_RS18845;old_locus_tag=AB69_0675 NZ_JHDO01000061.1 Protein Homology CDS 84296 85720 . - 0 ID=cds-WP_000162740.1;Parent=gene-AB69_RS18845;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AB69_RS18845;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 85866 87041 . + . ID=gene-AB69_RS18840;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AB69_RS18840;old_locus_tag=AB69_0676 NZ_JHDO01000061.1 Protein Homology CDS 85866 87041 . + 0 ID=cds-WP_000184541.1;Parent=gene-AB69_RS18840;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AB69_RS18840;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JHDO01000061.1 RefSeq gene 87195 87269 . - . ID=gene-AB69_RS18835;Name=AB69_RS18835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18835;old_locus_tag=AB69_0677 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87195 87269 . - . ID=rna-AB69_RS18835;Parent=gene-AB69_RS18835;anticodon=(pos:complement(87235..87237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18835;product=tRNA-Gln NZ_JHDO01000061.1 tRNAscan-SE exon 87195 87269 . - . ID=exon-AB69_RS18835-1;Parent=rna-AB69_RS18835;anticodon=(pos:complement(87235..87237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18835;product=tRNA-Gln NZ_JHDO01000061.1 RefSeq gene 87307 87381 . - . ID=gene-AB69_RS18830;Name=AB69_RS18830;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18830;old_locus_tag=AB69_0678 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87307 87381 . - . ID=rna-AB69_RS18830;Parent=gene-AB69_RS18830;anticodon=(pos:complement(87347..87349));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18830;product=tRNA-Gln NZ_JHDO01000061.1 tRNAscan-SE exon 87307 87381 . - . ID=exon-AB69_RS18830-1;Parent=rna-AB69_RS18830;anticodon=(pos:complement(87347..87349));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18830;product=tRNA-Gln NZ_JHDO01000061.1 RefSeq gene 87419 87493 . - . ID=gene-AB69_RS18825;Name=AB69_RS18825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18825;old_locus_tag=AB69_0679 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87419 87493 . - . ID=rna-AB69_RS18825;Parent=gene-AB69_RS18825;anticodon=(pos:complement(87459..87461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18825;product=tRNA-Gln NZ_JHDO01000061.1 tRNAscan-SE exon 87419 87493 . - . ID=exon-AB69_RS18825-1;Parent=rna-AB69_RS18825;anticodon=(pos:complement(87459..87461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18825;product=tRNA-Gln NZ_JHDO01000061.1 RefSeq gene 87531 87605 . - . ID=gene-AB69_RS18820;Name=AB69_RS18820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18820;old_locus_tag=AB69_0680 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87531 87605 . - . ID=rna-AB69_RS18820;Parent=gene-AB69_RS18820;anticodon=(pos:complement(87571..87573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18820;product=tRNA-Gln NZ_JHDO01000061.1 tRNAscan-SE exon 87531 87605 . - . ID=exon-AB69_RS18820-1;Parent=rna-AB69_RS18820;anticodon=(pos:complement(87571..87573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18820;product=tRNA-Gln NZ_JHDO01000061.1 RefSeq gene 87653 87729 . - . ID=gene-AB69_RS18815;Name=AB69_RS18815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18815;old_locus_tag=AB69_0681 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87653 87729 . - . ID=rna-AB69_RS18815;Parent=gene-AB69_RS18815;anticodon=(pos:complement(87693..87695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18815;product=tRNA-Met NZ_JHDO01000061.1 tRNAscan-SE exon 87653 87729 . - . ID=exon-AB69_RS18815-1;Parent=rna-AB69_RS18815;anticodon=(pos:complement(87693..87695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18815;product=tRNA-Met NZ_JHDO01000061.1 RefSeq gene 87745 87819 . - . ID=gene-AB69_RS18810;Name=AB69_RS18810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18810;old_locus_tag=AB69_0682 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87745 87819 . - . ID=rna-AB69_RS18810;Parent=gene-AB69_RS18810;anticodon=(pos:complement(87785..87787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18810;product=tRNA-Gln NZ_JHDO01000061.1 tRNAscan-SE exon 87745 87819 . - . ID=exon-AB69_RS18810-1;Parent=rna-AB69_RS18810;anticodon=(pos:complement(87785..87787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18810;product=tRNA-Gln NZ_JHDO01000061.1 RefSeq gene 87843 87927 . - . ID=gene-AB69_RS18805;Name=AB69_RS18805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18805;old_locus_tag=AB69_0683 NZ_JHDO01000061.1 tRNAscan-SE tRNA 87843 87927 . - . ID=rna-AB69_RS18805;Parent=gene-AB69_RS18805;anticodon=(pos:complement(87891..87893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18805;product=tRNA-Leu NZ_JHDO01000061.1 tRNAscan-SE exon 87843 87927 . - . ID=exon-AB69_RS18805-1;Parent=rna-AB69_RS18805;anticodon=(pos:complement(87891..87893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18805;product=tRNA-Leu ##sequence-region NZ_JHDO01000062.1 1 740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000062.1 RefSeq region 1 740 . + . ID=NZ_JHDO01000062.1:1..740;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000062.1 RefSeq gene 95 171 . - . ID=gene-AB69_RS18800;Name=AB69_RS18800;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18800;old_locus_tag=AB69_0684 NZ_JHDO01000062.1 tRNAscan-SE tRNA 95 171 . - . ID=rna-AB69_RS18800;Parent=gene-AB69_RS18800;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18800;product=tRNA-Met NZ_JHDO01000062.1 tRNAscan-SE exon 95 171 . - . ID=exon-AB69_RS18800-1;Parent=rna-AB69_RS18800;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18800;product=tRNA-Met NZ_JHDO01000062.1 RefSeq gene 187 261 . - . ID=gene-AB69_RS18795;Name=AB69_RS18795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18795;old_locus_tag=AB69_0685 NZ_JHDO01000062.1 tRNAscan-SE tRNA 187 261 . - . ID=rna-AB69_RS18795;Parent=gene-AB69_RS18795;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18795;product=tRNA-Gln NZ_JHDO01000062.1 tRNAscan-SE exon 187 261 . - . ID=exon-AB69_RS18795-1;Parent=rna-AB69_RS18795;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18795;product=tRNA-Gln NZ_JHDO01000062.1 RefSeq gene 285 369 . - . ID=gene-AB69_RS18790;Name=AB69_RS18790;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18790;old_locus_tag=AB69_0686 NZ_JHDO01000062.1 tRNAscan-SE tRNA 285 369 . - . ID=rna-AB69_RS18790;Parent=gene-AB69_RS18790;anticodon=(pos:complement(333..335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18790;product=tRNA-Leu NZ_JHDO01000062.1 tRNAscan-SE exon 285 369 . - . ID=exon-AB69_RS18790-1;Parent=rna-AB69_RS18790;anticodon=(pos:complement(333..335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18790;product=tRNA-Leu NZ_JHDO01000062.1 RefSeq gene 379 455 . - . ID=gene-AB69_RS18785;Name=AB69_RS18785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18785;old_locus_tag=AB69_0687 NZ_JHDO01000062.1 tRNAscan-SE tRNA 379 455 . - . ID=rna-AB69_RS18785;Parent=gene-AB69_RS18785;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18785;product=tRNA-Met NZ_JHDO01000062.1 tRNAscan-SE exon 379 455 . - . ID=exon-AB69_RS18785-1;Parent=rna-AB69_RS18785;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18785;product=tRNA-Met NZ_JHDO01000062.1 RefSeq gene 471 545 . - . ID=gene-AB69_RS18780;Name=AB69_RS18780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18780;old_locus_tag=AB69_0688 NZ_JHDO01000062.1 tRNAscan-SE tRNA 471 545 . - . ID=rna-AB69_RS18780;Parent=gene-AB69_RS18780;anticodon=(pos:complement(511..513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18780;product=tRNA-Gln NZ_JHDO01000062.1 tRNAscan-SE exon 471 545 . - . ID=exon-AB69_RS18780-1;Parent=rna-AB69_RS18780;anticodon=(pos:complement(511..513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18780;product=tRNA-Gln NZ_JHDO01000062.1 RefSeq gene 569 653 . - . ID=gene-AB69_RS18775;Name=AB69_RS18775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18775;old_locus_tag=AB69_0689 NZ_JHDO01000062.1 tRNAscan-SE tRNA 569 653 . - . ID=rna-AB69_RS18775;Parent=gene-AB69_RS18775;anticodon=(pos:complement(617..619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18775;product=tRNA-Leu NZ_JHDO01000062.1 tRNAscan-SE exon 569 653 . - . ID=exon-AB69_RS18775-1;Parent=rna-AB69_RS18775;anticodon=(pos:complement(617..619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18775;product=tRNA-Leu NZ_JHDO01000062.1 RefSeq gene 663 739 . - . ID=gene-AB69_RS18770;Name=AB69_RS18770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18770;old_locus_tag=AB69_0690 NZ_JHDO01000062.1 tRNAscan-SE tRNA 663 739 . - . ID=rna-AB69_RS18770;Parent=gene-AB69_RS18770;anticodon=(pos:complement(703..705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18770;product=tRNA-Met NZ_JHDO01000062.1 tRNAscan-SE exon 663 739 . - . ID=exon-AB69_RS18770-1;Parent=rna-AB69_RS18770;anticodon=(pos:complement(703..705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18770;product=tRNA-Met ##sequence-region NZ_JHDO01000063.1 1 34330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000063.1 RefSeq region 1 34330 . + . ID=NZ_JHDO01000063.1:1..34330;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000063.1 RefSeq gene 1 616 . + . ID=gene-AB69_RS18765;Name=AB69_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18765;old_locus_tag=AB69_0691;partial=true;start_range=.,1 NZ_JHDO01000063.1 Protein Homology CDS 1 616 . + 1 ID=cds-WP_032184392.1;Parent=gene-AB69_RS18765;Dbxref=GenBank:WP_032184392.1;Name=WP_032184392.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AB69_RS18765;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_032184392.1;start_range=.,1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 770 844 . - . ID=gene-AB69_RS18760;Name=AB69_RS18760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18760;old_locus_tag=AB69_0693 NZ_JHDO01000063.1 tRNAscan-SE tRNA 770 844 . - . ID=rna-AB69_RS18760;Parent=gene-AB69_RS18760;anticodon=(pos:complement(810..812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18760;product=tRNA-Gln NZ_JHDO01000063.1 tRNAscan-SE exon 770 844 . - . ID=exon-AB69_RS18760-1;Parent=rna-AB69_RS18760;anticodon=(pos:complement(810..812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18760;product=tRNA-Gln NZ_JHDO01000063.1 RefSeq gene 892 968 . - . ID=gene-AB69_RS18755;Name=AB69_RS18755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18755;old_locus_tag=AB69_0694 NZ_JHDO01000063.1 tRNAscan-SE tRNA 892 968 . - . ID=rna-AB69_RS18755;Parent=gene-AB69_RS18755;anticodon=(pos:complement(932..934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18755;product=tRNA-Met NZ_JHDO01000063.1 tRNAscan-SE exon 892 968 . - . ID=exon-AB69_RS18755-1;Parent=rna-AB69_RS18755;anticodon=(pos:complement(932..934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18755;product=tRNA-Met NZ_JHDO01000063.1 RefSeq gene 984 1058 . - . ID=gene-AB69_RS18750;Name=AB69_RS18750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18750;old_locus_tag=AB69_0695 NZ_JHDO01000063.1 tRNAscan-SE tRNA 984 1058 . - . ID=rna-AB69_RS18750;Parent=gene-AB69_RS18750;anticodon=(pos:complement(1024..1026));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18750;product=tRNA-Gln NZ_JHDO01000063.1 tRNAscan-SE exon 984 1058 . - . ID=exon-AB69_RS18750-1;Parent=rna-AB69_RS18750;anticodon=(pos:complement(1024..1026));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18750;product=tRNA-Gln NZ_JHDO01000063.1 RefSeq gene 1093 1167 . - . ID=gene-AB69_RS18745;Name=AB69_RS18745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18745;old_locus_tag=AB69_0696 NZ_JHDO01000063.1 tRNAscan-SE tRNA 1093 1167 . - . ID=rna-AB69_RS18745;Parent=gene-AB69_RS18745;anticodon=(pos:complement(1133..1135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18745;product=tRNA-Gln NZ_JHDO01000063.1 tRNAscan-SE exon 1093 1167 . - . ID=exon-AB69_RS18745-1;Parent=rna-AB69_RS18745;anticodon=(pos:complement(1133..1135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18745;product=tRNA-Gln NZ_JHDO01000063.1 RefSeq gene 1202 1276 . - . ID=gene-AB69_RS18740;Name=AB69_RS18740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18740;old_locus_tag=AB69_0697 NZ_JHDO01000063.1 tRNAscan-SE tRNA 1202 1276 . - . ID=rna-AB69_RS18740;Parent=gene-AB69_RS18740;anticodon=(pos:complement(1242..1244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18740;product=tRNA-Gln NZ_JHDO01000063.1 tRNAscan-SE exon 1202 1276 . - . ID=exon-AB69_RS18740-1;Parent=rna-AB69_RS18740;anticodon=(pos:complement(1242..1244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18740;product=tRNA-Gln NZ_JHDO01000063.1 RefSeq gene 1311 1385 . - . ID=gene-AB69_RS18735;Name=AB69_RS18735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18735;old_locus_tag=AB69_0698 NZ_JHDO01000063.1 tRNAscan-SE tRNA 1311 1385 . - . ID=rna-AB69_RS18735;Parent=gene-AB69_RS18735;anticodon=(pos:complement(1351..1353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18735;product=tRNA-Gln NZ_JHDO01000063.1 tRNAscan-SE exon 1311 1385 . - . ID=exon-AB69_RS18735-1;Parent=rna-AB69_RS18735;anticodon=(pos:complement(1351..1353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18735;product=tRNA-Gln NZ_JHDO01000063.1 RefSeq gene 1409 1493 . - . ID=gene-AB69_RS18730;Name=AB69_RS18730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18730;old_locus_tag=AB69_0699 NZ_JHDO01000063.1 tRNAscan-SE tRNA 1409 1493 . - . ID=rna-AB69_RS18730;Parent=gene-AB69_RS18730;anticodon=(pos:complement(1457..1459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18730;product=tRNA-Leu NZ_JHDO01000063.1 tRNAscan-SE exon 1409 1493 . - . ID=exon-AB69_RS18730-1;Parent=rna-AB69_RS18730;anticodon=(pos:complement(1457..1459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18730;product=tRNA-Leu NZ_JHDO01000063.1 RefSeq gene 1503 1579 . - . ID=gene-AB69_RS18725;Name=AB69_RS18725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18725;old_locus_tag=AB69_0700 NZ_JHDO01000063.1 tRNAscan-SE tRNA 1503 1579 . - . ID=rna-AB69_RS18725;Parent=gene-AB69_RS18725;anticodon=(pos:complement(1543..1545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18725;product=tRNA-Met NZ_JHDO01000063.1 tRNAscan-SE exon 1503 1579 . - . ID=exon-AB69_RS18725-1;Parent=rna-AB69_RS18725;anticodon=(pos:complement(1543..1545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18725;product=tRNA-Met NZ_JHDO01000063.1 RefSeq gene 1959 3623 . - . ID=gene-AB69_RS18720;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AB69_RS18720;old_locus_tag=AB69_0701 NZ_JHDO01000063.1 Protein Homology CDS 1959 3623 . - 0 ID=cds-WP_000337077.1;Parent=gene-AB69_RS18720;Dbxref=GenBank:WP_000337077.1;Name=WP_000337077.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB69_RS18720;product=asparagine synthase B;protein_id=WP_000337077.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 4020 4772 . - . ID=gene-AB69_RS18715;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AB69_RS18715;old_locus_tag=AB69_0703 NZ_JHDO01000063.1 Protein Homology CDS 4020 4772 . - 0 ID=cds-WP_000153129.1;Parent=gene-AB69_RS18715;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AB69_RS18715;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 4820 6040 . - . ID=gene-AB69_RS18710;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AB69_RS18710;old_locus_tag=AB69_0704 NZ_JHDO01000063.1 Protein Homology CDS 4820 6040 . - 0 ID=cds-WP_000187594.1;Parent=gene-AB69_RS18710;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AB69_RS18710;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 6049 7197 . - . ID=gene-AB69_RS18705;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AB69_RS18705;old_locus_tag=AB69_0705 NZ_JHDO01000063.1 Protein Homology CDS 6049 7197 . - 0 ID=cds-WP_000271153.1;Parent=gene-AB69_RS18705;Dbxref=GenBank:WP_000271153.1;Name=WP_000271153.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AB69_RS18705;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271153.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 7257 8057 . - . ID=gene-AB69_RS18700;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AB69_RS18700;old_locus_tag=AB69_0706 NZ_JHDO01000063.1 Protein Homology CDS 7257 8057 . - 0 ID=cds-WP_001237072.1;Parent=gene-AB69_RS18700;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AB69_RS18700;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 8390 10336 . + . ID=gene-AB69_RS18695;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AB69_RS18695;old_locus_tag=AB69_0708 NZ_JHDO01000063.1 Protein Homology CDS 8390 10336 . + 0 ID=cds-WP_001023094.1;Parent=gene-AB69_RS18695;Dbxref=GenBank:WP_001023094.1;Name=WP_001023094.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415205.1;locus_tag=AB69_RS18695;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023094.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 10306 10428 . - . ID=gene-AB69_RS30555;Name=AB69_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30555;old_locus_tag=AB69_0709 NZ_JHDO01000063.1 GeneMarkS-2+ CDS 10306 10428 . - 0 ID=cds-WP_001297734.1;Parent=gene-AB69_RS30555;Dbxref=GenBank:WP_001297734.1;Name=WP_001297734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30555;product=hypothetical protein;protein_id=WP_001297734.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 10539 12203 . + . ID=gene-AB69_RS18690;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AB69_RS18690;old_locus_tag=AB69_0710 NZ_JHDO01000063.1 Protein Homology CDS 10539 12203 . + 0 ID=cds-WP_001287154.1;Parent=gene-AB69_RS18690;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AB69_RS18690;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 12780 14186 . + . ID=gene-AB69_RS18685;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AB69_RS18685;old_locus_tag=AB69_0711 NZ_JHDO01000063.1 Protein Homology CDS 12780 14186 . + 0 ID=cds-WP_001258819.1;Parent=gene-AB69_RS18685;Dbxref=GenBank:WP_001258819.1;Name=WP_001258819.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AB69_RS18685;product=chitoporin ChiP;protein_id=WP_001258819.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 14236 14562 . + . ID=gene-AB69_RS18680;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AB69_RS18680;old_locus_tag=AB69_0712 NZ_JHDO01000063.1 Protein Homology CDS 14236 14562 . + 0 ID=cds-WP_000733579.1;Parent=gene-AB69_RS18680;Dbxref=GenBank:WP_000733579.1;Name=WP_000733579.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415208.1;locus_tag=AB69_RS18680;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733579.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 14646 15092 . - . ID=gene-AB69_RS18675;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AB69_RS18675;old_locus_tag=AB69_0713 NZ_JHDO01000063.1 Protein Homology CDS 14646 15092 . - 0 ID=cds-WP_000131702.1;Parent=gene-AB69_RS18675;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AB69_RS18675;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 15085 15171 . - . ID=gene-AB69_RS0123650;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AB69_RS0123650 NZ_JHDO01000063.1 Protein Homology CDS 15085 15171 . - 0 ID=cds-WP_001406816.1;Parent=gene-AB69_RS0123650;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AB69_RS0123650;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 15381 15911 . - . ID=gene-AB69_RS18670;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AB69_RS18670;old_locus_tag=AB69_0714 NZ_JHDO01000063.1 Protein Homology CDS 15381 15911 . - 0 ID=cds-WP_001018618.1;Parent=gene-AB69_RS18670;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AB69_RS18670;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 16051 16344 . - . ID=gene-AB69_RS18665;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AB69_RS18665;old_locus_tag=AB69_0715 NZ_JHDO01000063.1 Protein Homology CDS 16051 16344 . - 0 ID=cds-WP_001300829.1;Parent=gene-AB69_RS18665;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AB69_RS18665;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 16484 17248 . - . ID=gene-AB69_RS18660;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AB69_RS18660;old_locus_tag=AB69_0716 NZ_JHDO01000063.1 Protein Homology CDS 16484 17248 . - 0 ID=cds-WP_000773307.1;Parent=gene-AB69_RS18660;Dbxref=GenBank:WP_000773307.1;Name=WP_000773307.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415212.1;locus_tag=AB69_RS18660;product=esterase;protein_id=WP_000773307.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 17433 17978 . + . ID=gene-AB69_RS18655;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AB69_RS18655;old_locus_tag=AB69_0717 NZ_JHDO01000063.1 Protein Homology CDS 17433 17978 . + 0 ID=cds-WP_000848387.1;Parent=gene-AB69_RS18655;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AB69_RS18655;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 18004 19644 . + . ID=gene-AB69_RS18650;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AB69_RS18650;old_locus_tag=AB69_0718 NZ_JHDO01000063.1 Protein Homology CDS 18004 19644 . + 0 ID=cds-WP_001354238.1;Parent=gene-AB69_RS18650;Dbxref=GenBank:WP_001354238.1;Name=WP_001354238.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AB69_RS18650;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001354238.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 19858 20352 . + . ID=gene-AB69_RS18645;Name=AB69_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18645;old_locus_tag=AB69_0719 NZ_JHDO01000063.1 Protein Homology CDS 19858 20352 . + 0 ID=cds-WP_000856353.1;Parent=gene-AB69_RS18645;Dbxref=GenBank:WP_000856353.1;Name=WP_000856353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AB69_RS18645;product=lipoprotein;protein_id=WP_000856353.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 20393 21043 . - . ID=gene-AB69_RS18640;Name=AB69_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18640;old_locus_tag=AB69_0720 NZ_JHDO01000063.1 Protein Homology CDS 20393 21043 . - 0 ID=cds-WP_001208814.1;Parent=gene-AB69_RS18640;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AB69_RS18640;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11 NZ_JHDO01000063.1 RefSeq pseudogene 21167 21301 . - . ID=gene-AB69_RS0123660;Name=AB69_RS0123660;end_range=21301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123660;partial=true;pseudo=true NZ_JHDO01000063.1 Protein Homology CDS 21167 21301 . - 0 ID=cds-AB69_RS0123660;Parent=gene-AB69_RS0123660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=21301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AB69_RS0123660;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 21392 22711 . - . ID=gene-AB69_RS18635;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AB69_RS18635;old_locus_tag=AB69_0721 NZ_JHDO01000063.1 Protein Homology CDS 21392 22711 . - 0 ID=cds-WP_032230903.1;Parent=gene-AB69_RS18635;Dbxref=GenBank:WP_032230903.1;Name=WP_032230903.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AB69_RS18635;product=putrescine-ornithine antiporter;protein_id=WP_032230903.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 22708 24906 . - . ID=gene-AB69_RS18630;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AB69_RS18630;old_locus_tag=AB69_0722 NZ_JHDO01000063.1 Protein Homology CDS 22708 24906 . - 0 ID=cds-WP_000040192.1;Parent=gene-AB69_RS18630;Dbxref=GenBank:WP_000040192.1;Name=WP_000040192.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415220.1;locus_tag=AB69_RS18630;product=ornithine decarboxylase SpeF;protein_id=WP_000040192.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 25164 25268 . - . ID=gene-AB69_RS30195;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AB69_RS30195 NZ_JHDO01000063.1 Protein Homology CDS 25164 25268 . - 0 ID=cds-WP_211180488.1;Parent=gene-AB69_RS30195;Dbxref=GenBank:WP_211180488.1;Name=WP_211180488.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AB69_RS30195;product=leader peptide SpeFL;protein_id=WP_211180488.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 25502 26179 . - . ID=gene-AB69_RS18625;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AB69_RS18625;old_locus_tag=AB69_0724 NZ_JHDO01000063.1 Protein Homology CDS 25502 26179 . - 0 ID=cds-WP_000186076.1;Parent=gene-AB69_RS18625;Dbxref=GenBank:WP_000186076.1;Name=WP_000186076.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AB69_RS18625;product=two-component system response regulator KdpE;protein_id=WP_000186076.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 26176 28860 . - . ID=gene-AB69_RS18620;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AB69_RS18620;old_locus_tag=AB69_0725 NZ_JHDO01000063.1 Protein Homology CDS 26176 28860 . - 0 ID=cds-WP_032230905.1;Parent=gene-AB69_RS18620;Dbxref=GenBank:WP_032230905.1;Name=WP_032230905.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415223.1;locus_tag=AB69_RS18620;product=two-component system sensor histidine kinase KdpD;protein_id=WP_032230905.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 28853 29425 . - . ID=gene-AB69_RS18615;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AB69_RS18615;old_locus_tag=AB69_0726 NZ_JHDO01000063.1 Protein Homology CDS 28853 29425 . - 0 ID=cds-WP_001300431.1;Parent=gene-AB69_RS18615;Dbxref=GenBank:WP_001300431.1;Name=WP_001300431.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AB69_RS18615;product=K(+)-transporting ATPase subunit C;protein_id=WP_001300431.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 29434 31482 . - . ID=gene-AB69_RS18610;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AB69_RS18610;old_locus_tag=AB69_0727 NZ_JHDO01000063.1 Protein Homology CDS 29434 31482 . - 0 ID=cds-WP_032230907.1;Parent=gene-AB69_RS18610;Dbxref=GenBank:WP_032230907.1;Name=WP_032230907.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AB69_RS18610;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_032230907.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 31505 33178 . - . ID=gene-AB69_RS18605;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AB69_RS18605;old_locus_tag=AB69_0728 NZ_JHDO01000063.1 Protein Homology CDS 31505 33178 . - 0 ID=cds-WP_000741131.1;Parent=gene-AB69_RS18605;Dbxref=GenBank:WP_000741131.1;Name=WP_000741131.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AB69_RS18605;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 33178 33267 . - . ID=gene-AB69_RS0123670;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AB69_RS0123670 NZ_JHDO01000063.1 Protein Homology CDS 33178 33267 . - 0 ID=cds-WP_001272653.1;Parent=gene-AB69_RS0123670;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AB69_RS0123670;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 33580 33786 . + . ID=gene-AB69_RS18600;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AB69_RS18600;old_locus_tag=AB69_0730 NZ_JHDO01000063.1 Protein Homology CDS 33580 33786 . + 0 ID=cds-WP_000424924.1;Parent=gene-AB69_RS18600;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AB69_RS18600;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JHDO01000063.1 RefSeq gene 34029 34330 . + . ID=gene-AB69_RS18595;Name=AB69_RS18595;end_range=34330,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18595;old_locus_tag=AB69_0731;partial=true NZ_JHDO01000063.1 Protein Homology CDS 34029 34330 . + 0 ID=cds-WP_000015129.1;Parent=gene-AB69_RS18595;Dbxref=GenBank:WP_000015129.1;Name=WP_000015129.1;end_range=34330,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB69_RS18595;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_000015129.1;transl_table=11 ##sequence-region NZ_JHDO01000064.1 1 1378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000064.1 RefSeq region 1 1378 . + . ID=NZ_JHDO01000064.1:1..1378;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000064.1 RefSeq pseudogene 1 1378 . + . ID=gene-AB69_RS18590;Name=rhsC;end_range=1378,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AB69_RS18590;old_locus_tag=AB69_0732;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000064.1 Protein Homology CDS 1 1378 . + 0 ID=cds-AB69_RS18590;Parent=gene-AB69_RS18590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1378,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB69_RS18590;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDO01000065.1 1 1729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000065.1 RefSeq region 1 1729 . + . ID=NZ_JHDO01000065.1:1..1729;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000065.1 RefSeq pseudogene 1 1729 . + . ID=gene-AB69_RS26540;Name=rhsC;end_range=1729,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AB69_RS26540;old_locus_tag=AB69_0733;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000065.1 Protein Homology CDS 1 1729 . + 0 ID=cds-AB69_RS26540;Parent=gene-AB69_RS26540;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1729,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB69_RS26540;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDO01000066.1 1 2205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000066.1 RefSeq region 1 2205 . + . ID=NZ_JHDO01000066.1:1..2205;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000066.1 RefSeq gene 1 918 . + . ID=gene-AB69_RS18585;Name=AB69_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18585;old_locus_tag=AB69_0734;partial=true;start_range=.,1 NZ_JHDO01000066.1 Protein Homology CDS 1 918 . + 0 ID=cds-WP_001402953.1;Parent=gene-AB69_RS18585;Dbxref=GenBank:WP_001402953.1;Name=WP_001402953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AB69_RS18585;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_001402953.1;start_range=.,1;transl_table=11 NZ_JHDO01000066.1 RefSeq gene 915 1484 . + . ID=gene-AB69_RS18580;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=AB69_RS18580;old_locus_tag=AB69_0735 NZ_JHDO01000066.1 Protein Homology CDS 915 1484 . + 0 ID=cds-WP_032230921.1;Parent=gene-AB69_RS18580;Dbxref=GenBank:WP_032230921.1;Name=WP_032230921.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AB69_RS18580;product=protein YbfC;protein_id=WP_032230921.1;transl_table=11 NZ_JHDO01000066.1 RefSeq pseudogene 1653 2205 . + . ID=gene-AB69_RS28425;Name=AB69_RS28425;end_range=2205,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28425;partial=true;pseudo=true NZ_JHDO01000066.1 Protein Homology CDS 1653 2205 . + 0 ID=cds-AB69_RS28425;Parent=gene-AB69_RS28425;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2205,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28425;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000067.1 1 45226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000067.1 RefSeq region 1 45226 . + . ID=NZ_JHDO01000067.1:1..45226;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000067.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS18570;Name=AB69_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18570;old_locus_tag=AB69_0737 NZ_JHDO01000067.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-2;Parent=gene-AB69_RS18570;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS18570;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000067.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-2;Parent=gene-AB69_RS18570;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS18570;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000067.1 RefSeq pseudogene 881 1117 . + . ID=gene-AB69_RS18565;Name=ybfQ;end_range=1117,.;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=AB69_RS18565;old_locus_tag=AB69_0738;partial=true;pseudo=true NZ_JHDO01000067.1 Protein Homology CDS 881 1117 . + 0 ID=cds-AB69_RS18565;Parent=gene-AB69_RS18565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1117,.;gbkey=CDS;gene=ybfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229500.1;locus_tag=AB69_RS18565;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000067.1 RefSeq pseudogene 1261 2397 . + . ID=gene-AB69_RS18560;Name=AB69_RS18560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS18560;old_locus_tag=AB69_0739;pseudo=true NZ_JHDO01000067.1 Protein Homology CDS 1261 2397 . + 0 ID=cds-AB69_RS18560;Parent=gene-AB69_RS18560;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS18560;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000067.1 RefSeq pseudogene 2528 3286 . + . ID=gene-AB69_RS18555;Name=ybfD;end_range=3286,.;gbkey=Gene;gene=ybfD;gene_biotype=pseudogene;locus_tag=AB69_RS18555;old_locus_tag=AB69_0740;partial=true;pseudo=true NZ_JHDO01000067.1 Protein Homology CDS 2528 3286 . + 0 ID=cds-AB69_RS18555;Parent=gene-AB69_RS18555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3286,.;gbkey=CDS;gene=ybfD;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS18555;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 3437 3946 . + . ID=gene-AB69_RS18550;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AB69_RS18550;old_locus_tag=AB69_0741 NZ_JHDO01000067.1 Protein Homology CDS 3437 3946 . + 0 ID=cds-WP_001053305.1;Parent=gene-AB69_RS18550;Dbxref=GenBank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AB69_RS18550;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 3943 5361 . + . ID=gene-AB69_RS18545;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AB69_RS18545;old_locus_tag=AB69_0742 NZ_JHDO01000067.1 Protein Homology CDS 3943 5361 . + 0 ID=cds-WP_000207142.1;Parent=gene-AB69_RS18545;Dbxref=GenBank:WP_000207142.1;Name=WP_000207142.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415236.1;locus_tag=AB69_RS18545;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000207142.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 5403 6884 . - . ID=gene-AB69_RS18540;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AB69_RS18540;old_locus_tag=AB69_0743 NZ_JHDO01000067.1 Protein Homology CDS 5403 6884 . - 0 ID=cds-WP_001032689.1;Parent=gene-AB69_RS18540;Dbxref=GenBank:WP_001032689.1;Name=WP_001032689.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415237.1;locus_tag=AB69_RS18540;product=dipeptide permease DtpD;protein_id=WP_001032689.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 7155 7898 . + . ID=gene-AB69_RS18535;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AB69_RS18535;old_locus_tag=AB69_0744 NZ_JHDO01000067.1 Protein Homology CDS 7155 7898 . + 0 ID=cds-WP_000798871.1;Parent=gene-AB69_RS18535;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AB69_RS18535;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 7921 8577 . + . ID=gene-AB69_RS18530;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AB69_RS18530;old_locus_tag=AB69_0745 NZ_JHDO01000067.1 Protein Homology CDS 7921 8577 . + 0 ID=cds-WP_001188343.1;Parent=gene-AB69_RS18530;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AB69_RS18530;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 8571 9503 . + . ID=gene-AB69_RS18525;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AB69_RS18525;old_locus_tag=AB69_0746 NZ_JHDO01000067.1 Protein Homology CDS 8571 9503 . + 0 ID=cds-WP_000912724.1;Parent=gene-AB69_RS18525;Dbxref=GenBank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AB69_RS18525;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912724.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 9493 10227 . + . ID=gene-AB69_RS18520;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AB69_RS18520;old_locus_tag=AB69_0747 NZ_JHDO01000067.1 Protein Homology CDS 9493 10227 . + 0 ID=cds-WP_000687112.1;Parent=gene-AB69_RS18520;Dbxref=GenBank:WP_000687112.1;Name=WP_000687112.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AB69_RS18520;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687112.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 10263 11054 . + . ID=gene-AB69_RS18515;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AB69_RS18515;old_locus_tag=AB69_0748 NZ_JHDO01000067.1 Protein Homology CDS 10263 11054 . + 0 ID=cds-WP_001113989.1;Parent=gene-AB69_RS18515;Dbxref=GenBank:WP_001113989.1;Name=WP_001113989.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AB69_RS18515;product=endonuclease VIII;protein_id=WP_001113989.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 11051 12097 . - . ID=gene-AB69_RS18510;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AB69_RS18510;old_locus_tag=AB69_0749 NZ_JHDO01000067.1 Protein Homology CDS 11051 12097 . - 0 ID=cds-WP_001336221.1;Parent=gene-AB69_RS18510;Dbxref=GenBank:WP_001336221.1;Name=WP_001336221.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AB69_RS18510;product=AbrB family transcriptional regulator;protein_id=WP_001336221.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 12249 13310 . - . ID=gene-AB69_RS18505;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AB69_RS18505;old_locus_tag=AB69_0750 NZ_JHDO01000067.1 Protein Homology CDS 12249 13310 . - 0 ID=cds-WP_001272410.1;Parent=gene-AB69_RS18505;Dbxref=GenBank:WP_001272410.1;Name=WP_001272410.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AB69_RS18505;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 13307 14035 . - . ID=gene-AB69_RS18500;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AB69_RS18500;old_locus_tag=AB69_0751 NZ_JHDO01000067.1 Protein Homology CDS 13307 14035 . - 0 ID=cds-WP_000142799.1;Parent=gene-AB69_RS18500;Dbxref=GenBank:WP_000142799.1;Name=WP_000142799.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415245.1;locus_tag=AB69_RS18500;product=fimbrial biogenesis chaperone;protein_id=WP_000142799.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 14050 16506 . - . ID=gene-AB69_RS18495;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=AB69_RS18495;old_locus_tag=AB69_0752 NZ_JHDO01000067.1 Protein Homology CDS 14050 16506 . - 0 ID=cds-WP_001310647.1;Parent=gene-AB69_RS18495;Dbxref=GenBank:WP_001310647.1;Name=WP_001310647.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ybgQ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AB69_RS18495;product=fimbria/pilus outer membrane usher protein;protein_id=WP_001310647.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 16557 17123 . - . ID=gene-AB69_RS18490;Name=ybgD;gbkey=Gene;gene=ybgD;gene_biotype=protein_coding;locus_tag=AB69_RS18490;old_locus_tag=AB69_0753 NZ_JHDO01000067.1 Protein Homology CDS 16557 17123 . - 0 ID=cds-WP_032230923.1;Parent=gene-AB69_RS18490;Dbxref=GenBank:WP_032230923.1;Name=WP_032230923.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415247.1;locus_tag=AB69_RS18490;product=fimbrial protein;protein_id=WP_032230923.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 17513 18796 . - . ID=gene-AB69_RS18485;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AB69_RS18485;old_locus_tag=AB69_0754 NZ_JHDO01000067.1 Protein Homology CDS 17513 18796 . - 0 ID=cds-WP_000785834.1;Parent=gene-AB69_RS18485;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AB69_RS18485;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 19002 19109 . - . ID=gene-AB69_RS29690;Name=AB69_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29690 NZ_JHDO01000067.1 Protein Homology CDS 19002 19109 . - 0 ID=cds-WP_001305582.1;Parent=gene-AB69_RS29690;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AB69_RS29690;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 19490 19894 . + . ID=gene-AB69_RS0123685;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AB69_RS0123685;old_locus_tag=AB69_0755 NZ_JHDO01000067.1 Protein Homology CDS 19490 19894 . + 0 ID=cds-WP_000263347.1;Parent=gene-AB69_RS0123685;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AB69_RS0123685;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 19888 20235 . + . ID=gene-AB69_RS18480;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AB69_RS18480;old_locus_tag=AB69_0756 NZ_JHDO01000067.1 Protein Homology CDS 19888 20235 . + 0 ID=cds-WP_000254365.1;Parent=gene-AB69_RS18480;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AB69_RS18480;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 20235 22001 . + . ID=gene-AB69_RS18475;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AB69_RS18475;old_locus_tag=AB69_0757 NZ_JHDO01000067.1 Protein Homology CDS 20235 22001 . + 0 ID=cds-WP_000775540.1;Parent=gene-AB69_RS18475;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AB69_RS18475;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 22017 22733 . + . ID=gene-AB69_RS18470;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AB69_RS18470;old_locus_tag=AB69_0758 NZ_JHDO01000067.1 Protein Homology CDS 22017 22733 . + 0 ID=cds-WP_001235254.1;Parent=gene-AB69_RS18470;Dbxref=GenBank:WP_001235254.1;Name=WP_001235254.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AB69_RS18470;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235254.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 23034 25835 . + . ID=gene-AB69_RS18465;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AB69_RS18465;old_locus_tag=AB69_0760 NZ_JHDO01000067.1 Protein Homology CDS 23034 25835 . + 0 ID=cds-WP_001181473.1;Parent=gene-AB69_RS18465;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AB69_RS18465;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 25850 27067 . + . ID=gene-AB69_RS18460;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AB69_RS18460;old_locus_tag=AB69_0761 NZ_JHDO01000067.1 Protein Homology CDS 25850 27067 . + 0 ID=cds-WP_000099823.1;Parent=gene-AB69_RS18460;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AB69_RS18460;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 27433 28599 . + . ID=gene-AB69_RS18455;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AB69_RS18455;old_locus_tag=AB69_0762 NZ_JHDO01000067.1 Protein Homology CDS 27433 28599 . + 0 ID=cds-WP_001048602.1;Parent=gene-AB69_RS18455;Dbxref=GenBank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AB69_RS18455;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 28599 29468 . + . ID=gene-AB69_RS18450;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AB69_RS18450;old_locus_tag=AB69_0763 NZ_JHDO01000067.1 Protein Homology CDS 28599 29468 . + 0 ID=cds-WP_000025458.1;Parent=gene-AB69_RS18450;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AB69_RS18450;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 29572 30294 . - . ID=gene-AB69_RS18445;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AB69_RS18445;old_locus_tag=AB69_0764 NZ_JHDO01000067.1 Protein Homology CDS 29572 30294 . - 0 ID=cds-WP_000509902.1;Parent=gene-AB69_RS18445;Dbxref=GenBank:WP_000509902.1;Name=WP_000509902.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AB69_RS18445;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 30463 32379 . + . ID=gene-AB69_RS18440;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AB69_RS18440;old_locus_tag=AB69_0765 NZ_JHDO01000067.1 Protein Homology CDS 30463 32379 . + 0 ID=cds-WP_032230926.1;Parent=gene-AB69_RS18440;Dbxref=GenBank:WP_032230926.1;Name=WP_032230926.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AB69_RS18440;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_032230926.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 32397 35030 . + . ID=gene-AB69_RS18435;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AB69_RS18435;old_locus_tag=AB69_0766 NZ_JHDO01000067.1 Protein Homology CDS 32397 35030 . + 0 ID=cds-WP_032230925.1;Parent=gene-AB69_RS18435;Dbxref=GenBank:WP_032230925.1;Name=WP_032230925.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AB69_RS18435;product=mannosylglycerate hydrolase;protein_id=WP_032230925.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 35877 37445 . + . ID=gene-AB69_RS18425;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AB69_RS18425;old_locus_tag=AB69_0768 NZ_JHDO01000067.1 Protein Homology CDS 35877 37445 . + 0 ID=cds-WP_000884361.1;Parent=gene-AB69_RS18425;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AB69_RS18425;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 37461 38600 . + . ID=gene-AB69_RS18420;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AB69_RS18420;old_locus_tag=AB69_0769 NZ_JHDO01000067.1 Protein Homology CDS 37461 38600 . + 0 ID=cds-WP_000568275.1;Parent=gene-AB69_RS18420;Dbxref=GenBank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AB69_RS18420;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 38615 38728 . + . ID=gene-AB69_RS18415;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AB69_RS18415;old_locus_tag=AB69_0770 NZ_JHDO01000067.1 Protein Homology CDS 38615 38728 . + 0 ID=cds-WP_000270282.1;Parent=gene-AB69_RS18415;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AB69_RS18415;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 38728 39021 . + . ID=gene-AB69_RS18410;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AB69_RS18410;old_locus_tag=AB69_0771 NZ_JHDO01000067.1 Protein Homology CDS 38728 39021 . + 0 ID=cds-WP_000034602.1;Parent=gene-AB69_RS18410;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AB69_RS18410;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 39171 39575 . + . ID=gene-AB69_RS18405;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AB69_RS18405;old_locus_tag=AB69_0772 NZ_JHDO01000067.1 Protein Homology CDS 39171 39575 . + 0 ID=cds-WP_001098384.1;Parent=gene-AB69_RS18405;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AB69_RS18405;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 39572 40264 . + . ID=gene-AB69_RS18400;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AB69_RS18400;old_locus_tag=AB69_0773 NZ_JHDO01000067.1 Protein Homology CDS 39572 40264 . + 0 ID=cds-WP_000131314.1;Parent=gene-AB69_RS18400;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AB69_RS18400;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 40268 40696 . + . ID=gene-AB69_RS18395;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AB69_RS18395;old_locus_tag=AB69_0774 NZ_JHDO01000067.1 Protein Homology CDS 40268 40696 . + 0 ID=cds-WP_000090097.1;Parent=gene-AB69_RS18395;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AB69_RS18395;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 40761 42026 . + . ID=gene-AB69_RS18390;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AB69_RS18390;old_locus_tag=AB69_0775 NZ_JHDO01000067.1 Protein Homology CDS 40761 42026 . + 0 ID=cds-WP_000030637.1;Parent=gene-AB69_RS18390;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AB69_RS18390;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 42159 43451 . + . ID=gene-AB69_RS18385;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AB69_RS18385;old_locus_tag=AB69_0776 NZ_JHDO01000067.1 Protein Homology CDS 42159 43451 . + 0 ID=cds-WP_001295307.1;Parent=gene-AB69_RS18385;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AB69_RS18385;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 43486 44007 . + . ID=gene-AB69_RS18380;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AB69_RS18380;old_locus_tag=AB69_0777 NZ_JHDO01000067.1 Protein Homology CDS 43486 44007 . + 0 ID=cds-WP_001295306.1;Parent=gene-AB69_RS18380;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AB69_RS18380;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 44017 44808 . + . ID=gene-AB69_RS18375;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AB69_RS18375;old_locus_tag=AB69_0778 NZ_JHDO01000067.1 Protein Homology CDS 44017 44808 . + 0 ID=cds-WP_000097571.1;Parent=gene-AB69_RS18375;Dbxref=GenBank:WP_000097571.1;Name=WP_000097571.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415270.1;locus_tag=AB69_RS18375;product=cell division protein CpoB;protein_id=WP_000097571.1;transl_table=11 NZ_JHDO01000067.1 RefSeq gene 44973 45048 . + . ID=gene-AB69_RS18370;Name=AB69_RS18370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18370;old_locus_tag=AB69_0779 NZ_JHDO01000067.1 tRNAscan-SE tRNA 44973 45048 . + . ID=rna-AB69_RS18370;Parent=gene-AB69_RS18370;anticodon=(pos:45006..45008);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18370;product=tRNA-Lys NZ_JHDO01000067.1 tRNAscan-SE exon 44973 45048 . + . ID=exon-AB69_RS18370-1;Parent=rna-AB69_RS18370;anticodon=(pos:45006..45008);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18370;product=tRNA-Lys ##sequence-region NZ_JHDO01000068.1 1 1235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000068.1 RefSeq region 1 1235 . + . ID=NZ_JHDO01000068.1:1..1235;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000068.1 RefSeq gene 170 245 . + . ID=gene-AB69_RS18365;Name=AB69_RS18365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18365;old_locus_tag=AB69_0781 NZ_JHDO01000068.1 tRNAscan-SE tRNA 170 245 . + . ID=rna-AB69_RS18365;Parent=gene-AB69_RS18365;anticodon=(pos:203..205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18365;product=tRNA-Lys NZ_JHDO01000068.1 tRNAscan-SE exon 170 245 . + . ID=exon-AB69_RS18365-1;Parent=rna-AB69_RS18365;anticodon=(pos:203..205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18365;product=tRNA-Lys NZ_JHDO01000068.1 RefSeq gene 378 453 . + . ID=gene-AB69_RS18360;Name=AB69_RS18360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18360;old_locus_tag=AB69_0782 NZ_JHDO01000068.1 tRNAscan-SE tRNA 378 453 . + . ID=rna-AB69_RS18360;Parent=gene-AB69_RS18360;anticodon=(pos:411..413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18360;product=tRNA-Lys NZ_JHDO01000068.1 tRNAscan-SE exon 378 453 . + . ID=exon-AB69_RS18360-1;Parent=rna-AB69_RS18360;anticodon=(pos:411..413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18360;product=tRNA-Lys NZ_JHDO01000068.1 RefSeq gene 584 659 . + . ID=gene-AB69_RS18355;Name=AB69_RS18355;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18355;old_locus_tag=AB69_0783 NZ_JHDO01000068.1 tRNAscan-SE tRNA 584 659 . + . ID=rna-AB69_RS18355;Parent=gene-AB69_RS18355;anticodon=(pos:617..619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18355;product=tRNA-Val NZ_JHDO01000068.1 tRNAscan-SE exon 584 659 . + . ID=exon-AB69_RS18355-1;Parent=rna-AB69_RS18355;anticodon=(pos:617..619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18355;product=tRNA-Val NZ_JHDO01000068.1 RefSeq gene 662 737 . + . ID=gene-AB69_RS18350;Name=AB69_RS18350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18350;old_locus_tag=AB69_0784 NZ_JHDO01000068.1 tRNAscan-SE tRNA 662 737 . + . ID=rna-AB69_RS18350;Parent=gene-AB69_RS18350;anticodon=(pos:695..697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18350;product=tRNA-Lys NZ_JHDO01000068.1 tRNAscan-SE exon 662 737 . + . ID=exon-AB69_RS18350-1;Parent=rna-AB69_RS18350;anticodon=(pos:695..697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18350;product=tRNA-Lys NZ_JHDO01000068.1 RefSeq gene 887 962 . + . ID=gene-AB69_RS18345;Name=AB69_RS18345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18345;old_locus_tag=AB69_0785 NZ_JHDO01000068.1 tRNAscan-SE tRNA 887 962 . + . ID=rna-AB69_RS18345;Parent=gene-AB69_RS18345;anticodon=(pos:920..922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18345;product=tRNA-Val NZ_JHDO01000068.1 tRNAscan-SE exon 887 962 . + . ID=exon-AB69_RS18345-1;Parent=rna-AB69_RS18345;anticodon=(pos:920..922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18345;product=tRNA-Val NZ_JHDO01000068.1 RefSeq gene 966 1041 . + . ID=gene-AB69_RS18340;Name=AB69_RS18340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS18340;old_locus_tag=AB69_0786 NZ_JHDO01000068.1 tRNAscan-SE tRNA 966 1041 . + . ID=rna-AB69_RS18340;Parent=gene-AB69_RS18340;anticodon=(pos:999..1001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18340;product=tRNA-Lys NZ_JHDO01000068.1 tRNAscan-SE exon 966 1041 . + . ID=exon-AB69_RS18340-1;Parent=rna-AB69_RS18340;anticodon=(pos:999..1001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS18340;product=tRNA-Lys ##sequence-region NZ_JHDO01000069.1 1 70819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000069.1 RefSeq region 1 70819 . + . ID=NZ_JHDO01000069.1:1..70819;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000069.1 RefSeq gene 77 202 . + . ID=gene-AB69_RS25745;Name=AB69_RS25745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25745 NZ_JHDO01000069.1 cmsearch ncRNA 77 202 . + . ID=rna-AB69_RS25745;Parent=gene-AB69_RS25745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25745;product=RtT sRNA NZ_JHDO01000069.1 cmsearch exon 77 202 . + . ID=exon-AB69_RS25745-1;Parent=rna-AB69_RS25745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25745;product=RtT sRNA NZ_JHDO01000069.1 RefSeq gene 479 1522 . + . ID=gene-AB69_RS18335;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB69_RS18335;old_locus_tag=AB69_0788 NZ_JHDO01000069.1 Protein Homology CDS 479 1522 . + 0 ID=cds-WP_000115290.1;Parent=gene-AB69_RS18335;Dbxref=GenBank:WP_000115290.1;Name=WP_000115290.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB69_RS18335;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 1560 2279 . + . ID=gene-AB69_RS18330;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AB69_RS18330;old_locus_tag=AB69_0789 NZ_JHDO01000069.1 Protein Homology CDS 1560 2279 . + 0 ID=cds-WP_000345410.1;Parent=gene-AB69_RS18330;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AB69_RS18330;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 2276 3217 . - . ID=gene-AB69_RS18325;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AB69_RS18325;old_locus_tag=AB69_0790 NZ_JHDO01000069.1 Protein Homology CDS 2276 3217 . - 0 ID=cds-WP_000951292.1;Parent=gene-AB69_RS18325;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AB69_RS18325;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 3331 3711 . - . ID=gene-AB69_RS18320;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AB69_RS18320;old_locus_tag=AB69_0791 NZ_JHDO01000069.1 Protein Homology CDS 3331 3711 . - 0 ID=cds-WP_000784351.1;Parent=gene-AB69_RS18320;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AB69_RS18320;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 4027 5079 . + . ID=gene-AB69_RS18315;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AB69_RS18315;old_locus_tag=AB69_0792 NZ_JHDO01000069.1 Protein Homology CDS 4027 5079 . + 0 ID=cds-WP_001109196.1;Parent=gene-AB69_RS18315;Dbxref=GenBank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AB69_RS18315;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 5237 5989 . - . ID=gene-AB69_RS18310;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AB69_RS18310;old_locus_tag=AB69_0793 NZ_JHDO01000069.1 Protein Homology CDS 5237 5989 . - 0 ID=cds-WP_001295305.1;Parent=gene-AB69_RS18310;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AB69_RS18310;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 6191 7231 . - . ID=gene-AB69_RS18305;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AB69_RS18305;old_locus_tag=AB69_0795 NZ_JHDO01000069.1 Protein Homology CDS 6191 7231 . - 0 ID=cds-WP_000931389.1;Parent=gene-AB69_RS18305;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AB69_RS18305;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 7225 8373 . - . ID=gene-AB69_RS18300;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AB69_RS18300;old_locus_tag=AB69_0796 NZ_JHDO01000069.1 Protein Homology CDS 7225 8373 . - 0 ID=cds-WP_001427167.1;Parent=gene-AB69_RS18300;Dbxref=GenBank:WP_001427167.1;Name=WP_001427167.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AB69_RS18300;product=galactokinase;protein_id=WP_001427167.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 8377 9423 . - . ID=gene-AB69_RS18295;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AB69_RS18295;old_locus_tag=AB69_0797 NZ_JHDO01000069.1 Protein Homology CDS 8377 9423 . - 0 ID=cds-WP_000191497.1;Parent=gene-AB69_RS18295;Dbxref=GenBank:WP_000191497.1;Name=WP_000191497.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AB69_RS18295;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 9433 10449 . - . ID=gene-AB69_RS18290;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AB69_RS18290;old_locus_tag=AB69_0798 NZ_JHDO01000069.1 Protein Homology CDS 9433 10449 . - 0 ID=cds-WP_001265438.1;Parent=gene-AB69_RS18290;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AB69_RS18290;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 10710 12182 . - . ID=gene-AB69_RS18285;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AB69_RS18285;old_locus_tag=AB69_0799 NZ_JHDO01000069.1 Protein Homology CDS 10710 12182 . - 0 ID=cds-WP_000096869.1;Parent=gene-AB69_RS18285;Dbxref=GenBank:WP_000096869.1;Name=WP_000096869.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AB69_RS18285;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096869.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 12250 13038 . - . ID=gene-AB69_RS18280;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AB69_RS18280;old_locus_tag=AB69_0800 NZ_JHDO01000069.1 Protein Homology CDS 12250 13038 . - 0 ID=cds-WP_001147439.1;Parent=gene-AB69_RS18280;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AB69_RS18280;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 13167 13316 . + . ID=gene-AB69_RS18275;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AB69_RS18275;old_locus_tag=AB69_0801 NZ_JHDO01000069.1 Protein Homology CDS 13167 13316 . + 0 ID=cds-WP_000891515.1;Parent=gene-AB69_RS18275;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AB69_RS18275;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 13483 14256 . + . ID=gene-AB69_RS18270;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AB69_RS18270;old_locus_tag=AB69_0802 NZ_JHDO01000069.1 Protein Homology CDS 13483 14256 . + 0 ID=cds-WP_000101984.1;Parent=gene-AB69_RS18270;Dbxref=GenBank:WP_000101984.1;Name=WP_000101984.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AB69_RS18270;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 14256 14945 . + . ID=gene-AB69_RS18265;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AB69_RS18265;old_locus_tag=AB69_0803 NZ_JHDO01000069.1 Protein Homology CDS 14256 14945 . + 0 ID=cds-WP_000604034.1;Parent=gene-AB69_RS18265;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AB69_RS18265;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 14948 16006 . + . ID=gene-AB69_RS18260;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AB69_RS18260;old_locus_tag=AB69_0804 NZ_JHDO01000069.1 Protein Homology CDS 14948 16006 . + 0 ID=cds-WP_000891692.1;Parent=gene-AB69_RS18260;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AB69_RS18260;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 16007 16825 . - . ID=gene-AB69_RS18255;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AB69_RS18255;old_locus_tag=AB69_0805 NZ_JHDO01000069.1 Protein Homology CDS 16007 16825 . - 0 ID=cds-WP_001300666.1;Parent=gene-AB69_RS18255;Dbxref=GenBank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AB69_RS18255;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 16980 17975 . + . ID=gene-AB69_RS18250;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AB69_RS18250;old_locus_tag=AB69_0806 NZ_JHDO01000069.1 Protein Homology CDS 16980 17975 . + 0 ID=cds-WP_032230950.1;Parent=gene-AB69_RS18250;Dbxref=GenBank:WP_032230950.1;Name=WP_032230950.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AB69_RS18250;product=6-phosphogluconolactonase;protein_id=WP_032230950.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 18016 18969 . - . ID=gene-AB69_RS18245;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AB69_RS18245;old_locus_tag=AB69_0807 NZ_JHDO01000069.1 Protein Homology CDS 18016 18969 . - 0 ID=cds-WP_000679972.1;Parent=gene-AB69_RS18245;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AB69_RS18245;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 19153 20205 . + . ID=gene-AB69_RS18240;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AB69_RS18240;old_locus_tag=AB69_0809 NZ_JHDO01000069.1 Protein Homology CDS 19153 20205 . + 0 ID=cds-WP_000723652.1;Parent=gene-AB69_RS18240;Dbxref=GenBank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AB69_RS18240;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JHDO01000069.1 RefSeq pseudogene 20281 21713 . + . ID=gene-AB69_RS18235;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=pseudogene;locus_tag=AB69_RS18235;old_locus_tag=AB69_0810;pseudo=true NZ_JHDO01000069.1 Protein Homology CDS 20281 21713 . + 0 ID=cds-AB69_RS18235;Parent=gene-AB69_RS18235;Note=frameshifted;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AB69_RS18235;product=anion permease;pseudo=true;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 21896 24157 . + . ID=gene-AB69_RS18230;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AB69_RS18230;old_locus_tag=AB69_0812 NZ_JHDO01000069.1 Protein Homology CDS 21896 24157 . + 0 ID=cds-WP_032230949.1;Parent=gene-AB69_RS18230;Dbxref=GenBank:WP_032230949.1;Name=WP_032230949.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AB69_RS18230;product=hydratase;protein_id=WP_032230949.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 24391 25674 . - . ID=gene-AB69_RS18225;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AB69_RS18225;old_locus_tag=AB69_0813 NZ_JHDO01000069.1 Protein Homology CDS 24391 25674 . - 0 ID=cds-WP_001091569.1;Parent=gene-AB69_RS18225;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AB69_RS18225;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 25826 26302 . - . ID=gene-AB69_RS18220;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AB69_RS18220;old_locus_tag=AB69_0814 NZ_JHDO01000069.1 Protein Homology CDS 25826 26302 . - 0 ID=cds-WP_000767389.1;Parent=gene-AB69_RS18220;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AB69_RS18220;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 26361 27650 . - . ID=gene-AB69_RS18215;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AB69_RS18215;old_locus_tag=AB69_0815 NZ_JHDO01000069.1 Protein Homology CDS 26361 27650 . - 0 ID=cds-WP_001295303.1;Parent=gene-AB69_RS18215;Dbxref=GenBank:WP_001295303.1;Name=WP_001295303.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AB69_RS18215;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001295303.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 27737 28777 . + . ID=gene-AB69_RS18210;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AB69_RS18210;old_locus_tag=AB69_0816 NZ_JHDO01000069.1 Protein Homology CDS 27737 28777 . + 0 ID=cds-WP_000951213.1;Parent=gene-AB69_RS18210;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AB69_RS18210;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 28774 29928 . + . ID=gene-AB69_RS18205;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AB69_RS18205;old_locus_tag=AB69_0817 NZ_JHDO01000069.1 Protein Homology CDS 28774 29928 . + 0 ID=cds-WP_000118826.1;Parent=gene-AB69_RS18205;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AB69_RS18205;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 29915 30670 . + . ID=gene-AB69_RS18200;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AB69_RS18200;old_locus_tag=AB69_0818 NZ_JHDO01000069.1 Protein Homology CDS 29915 30670 . + 0 ID=cds-WP_000246761.1;Parent=gene-AB69_RS18200;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AB69_RS18200;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 30663 31340 . + . ID=gene-AB69_RS18195;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB69_RS18195;old_locus_tag=AB69_0819 NZ_JHDO01000069.1 Protein Homology CDS 30663 31340 . + 0 ID=cds-WP_000044843.1;Parent=gene-AB69_RS18195;Dbxref=GenBank:WP_000044843.1;Name=WP_000044843.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AB69_RS18195;product=dethiobiotin synthase;protein_id=WP_000044843.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 31919 33940 . + . ID=gene-AB69_RS18190;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AB69_RS18190;old_locus_tag=AB69_0820 NZ_JHDO01000069.1 Protein Homology CDS 31919 33940 . + 0 ID=cds-WP_000042533.1;Parent=gene-AB69_RS18190;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AB69_RS18190;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 34132 35040 . - . ID=gene-AB69_RS18185;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AB69_RS18185;old_locus_tag=AB69_0821 NZ_JHDO01000069.1 Protein Homology CDS 34132 35040 . - 0 ID=cds-WP_001295302.1;Parent=gene-AB69_RS18185;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AB69_RS18185;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JHDO01000069.1 cmsearch riboswitch 35305 35449 . + . ID=id-NZ_JHDO01000069.1:35305..35449;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000069.1 RefSeq gene 35437 36426 . + . ID=gene-AB69_RS18180;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AB69_RS18180;old_locus_tag=AB69_0822 NZ_JHDO01000069.1 Protein Homology CDS 35437 36426 . + 0 ID=cds-WP_001340186.1;Parent=gene-AB69_RS18180;Dbxref=GenBank:WP_001340186.1;Name=WP_001340186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AB69_RS18180;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001340186.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 36448 36960 . + . ID=gene-AB69_RS18175;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AB69_RS18175;old_locus_tag=AB69_0823 NZ_JHDO01000069.1 Protein Homology CDS 36448 36960 . + 0 ID=cds-WP_000084639.1;Parent=gene-AB69_RS18175;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AB69_RS18175;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 36963 37448 . + . ID=gene-AB69_RS18170;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AB69_RS18170;old_locus_tag=AB69_0824 NZ_JHDO01000069.1 Protein Homology CDS 36963 37448 . + 0 ID=cds-WP_000080885.1;Parent=gene-AB69_RS18170;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AB69_RS18170;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 37441 37686 . + . ID=gene-AB69_RS18165;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AB69_RS18165;old_locus_tag=AB69_0825 NZ_JHDO01000069.1 Protein Homology CDS 37441 37686 . + 0 ID=cds-WP_000598621.1;Parent=gene-AB69_RS18165;Dbxref=GenBank:WP_000598621.1;Name=WP_000598621.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AB69_RS18165;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598621.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 37688 38140 . + . ID=gene-AB69_RS18160;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AB69_RS18160;old_locus_tag=AB69_0826 NZ_JHDO01000069.1 Protein Homology CDS 37688 38140 . + 0 ID=cds-WP_000852296.1;Parent=gene-AB69_RS18160;Dbxref=GenBank:WP_000852296.1;Name=WP_000852296.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AB69_RS18160;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852296.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 38277 38981 . + . ID=gene-AB69_RS18155;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AB69_RS18155;old_locus_tag=AB69_0827 NZ_JHDO01000069.1 Protein Homology CDS 38277 38981 . + 0 ID=cds-WP_000373624.1;Parent=gene-AB69_RS18155;Dbxref=GenBank:WP_000373624.1;Name=WP_000373624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AB69_RS18155;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 39186 39899 . + . ID=gene-AB69_RS18150;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AB69_RS18150;old_locus_tag=AB69_0828 NZ_JHDO01000069.1 Protein Homology CDS 39186 39899 . + 0 ID=cds-WP_032230948.1;Parent=gene-AB69_RS18150;Dbxref=GenBank:WP_032230948.1;Name=WP_032230948.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AB69_RS18150;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032230948.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 39935 40891 . - . ID=gene-AB69_RS18145;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AB69_RS18145;old_locus_tag=AB69_0829 NZ_JHDO01000069.1 Protein Homology CDS 39935 40891 . - 0 ID=cds-WP_000045450.1;Parent=gene-AB69_RS18145;Dbxref=GenBank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AB69_RS18145;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045450.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 40891 42132 . - . ID=gene-AB69_RS18140;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AB69_RS18140;old_locus_tag=AB69_0830 NZ_JHDO01000069.1 Protein Homology CDS 40891 42132 . - 0 ID=cds-WP_000650337.1;Parent=gene-AB69_RS18140;Dbxref=GenBank:WP_000650337.1;Name=WP_000650337.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AB69_RS18140;product=cardiolipin synthase ClsB;protein_id=WP_000650337.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 42129 42890 . - . ID=gene-AB69_RS18135;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AB69_RS18135;old_locus_tag=AB69_0831 NZ_JHDO01000069.1 Protein Homology CDS 42129 42890 . - 0 ID=cds-WP_001113348.1;Parent=gene-AB69_RS18135;Dbxref=GenBank:WP_001113348.1;Name=WP_001113348.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AB69_RS18135;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 43023 43433 . + . ID=gene-AB69_RS18130;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AB69_RS18130;old_locus_tag=AB69_0832 NZ_JHDO01000069.1 Protein Homology CDS 43023 43433 . + 0 ID=cds-WP_000871982.1;Parent=gene-AB69_RS18130;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AB69_RS18130;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 43395 44501 . - . ID=gene-AB69_RS18125;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AB69_RS18125;old_locus_tag=AB69_0833 NZ_JHDO01000069.1 Protein Homology CDS 43395 44501 . - 0 ID=cds-WP_000469031.1;Parent=gene-AB69_RS18125;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AB69_RS18125;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 44512 45645 . - . ID=gene-AB69_RS18120;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AB69_RS18120;old_locus_tag=AB69_0834 NZ_JHDO01000069.1 Protein Homology CDS 44512 45645 . - 0 ID=cds-WP_000070131.1;Parent=gene-AB69_RS18120;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AB69_RS18120;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 45638 47374 . - . ID=gene-AB69_RS18115;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AB69_RS18115;old_locus_tag=AB69_0835 NZ_JHDO01000069.1 Protein Homology CDS 45638 47374 . - 0 ID=cds-WP_000996107.1;Parent=gene-AB69_RS18115;Dbxref=GenBank:WP_000996107.1;Name=WP_000996107.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AB69_RS18115;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996107.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 47367 48362 . - . ID=gene-AB69_RS18110;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AB69_RS18110;old_locus_tag=AB69_0836 NZ_JHDO01000069.1 Protein Homology CDS 47367 48362 . - 0 ID=cds-WP_000743444.1;Parent=gene-AB69_RS18110;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AB69_RS18110;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 48365 49036 . - . ID=gene-AB69_RS18105;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AB69_RS18105;old_locus_tag=AB69_0837 NZ_JHDO01000069.1 Protein Homology CDS 48365 49036 . - 0 ID=cds-WP_001296991.1;Parent=gene-AB69_RS18105;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AB69_RS18105;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 49265 50629 . + . ID=gene-AB69_RS18100;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AB69_RS18100;old_locus_tag=AB69_0838 NZ_JHDO01000069.1 Protein Homology CDS 49265 50629 . + 0 ID=cds-WP_000007101.1;Parent=gene-AB69_RS18100;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AB69_RS18100;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 50861 51343 . - . ID=gene-AB69_RS18095;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AB69_RS18095;old_locus_tag=AB69_0839 NZ_JHDO01000069.1 Protein Homology CDS 50861 51343 . - 0 ID=cds-WP_001145126.1;Parent=gene-AB69_RS18095;Dbxref=GenBank:WP_001145126.1;Name=WP_001145126.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AB69_RS18095;product=N-glycosidase YbiA;protein_id=WP_001145126.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 51463 53613 . + . ID=gene-AB69_RS18090;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AB69_RS18090;old_locus_tag=AB69_0840 NZ_JHDO01000069.1 Protein Homology CDS 51463 53613 . + 0 ID=cds-WP_001340191.1;Parent=gene-AB69_RS18090;Dbxref=GenBank:WP_001340191.1;Name=WP_001340191.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AB69_RS18090;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 53641 54603 . + . ID=gene-AB69_RS18085;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AB69_RS18085;old_locus_tag=AB69_0841 NZ_JHDO01000069.1 Protein Homology CDS 53641 54603 . + 0 ID=cds-WP_000386551.1;Parent=gene-AB69_RS18085;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AB69_RS18085;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 54744 55829 . + . ID=gene-AB69_RS18080;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AB69_RS18080;old_locus_tag=AB69_0842 NZ_JHDO01000069.1 Protein Homology CDS 54744 55829 . + 0 ID=cds-WP_000443530.1;Parent=gene-AB69_RS18080;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AB69_RS18080;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 55896 55955 . + . ID=gene-AB69_RS30200;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AB69_RS30200 NZ_JHDO01000069.1 Protein Homology CDS 55896 55955 . + 0 ID=cds-WP_211180490.1;Parent=gene-AB69_RS30200;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AB69_RS30200;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 56058 56318 . - . ID=gene-AB69_RS18075;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AB69_RS18075;old_locus_tag=AB69_0843 NZ_JHDO01000069.1 Protein Homology CDS 56058 56318 . - 0 ID=cds-WP_000849301.1;Parent=gene-AB69_RS18075;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AB69_RS18075;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 56583 56849 . - . ID=gene-AB69_RS18070;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AB69_RS18070;old_locus_tag=AB69_0844 NZ_JHDO01000069.1 Protein Homology CDS 56583 56849 . - 0 ID=cds-WP_000146343.1;Parent=gene-AB69_RS18070;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AB69_RS18070;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 56923 57600 . - . ID=gene-AB69_RS18065;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AB69_RS18065;old_locus_tag=AB69_0845 NZ_JHDO01000069.1 Protein Homology CDS 56923 57600 . - 0 ID=cds-WP_000990177.1;Parent=gene-AB69_RS18065;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AB69_RS18065;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 57642 59924 . - . ID=gene-AB69_RS18060;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AB69_RS18060;old_locus_tag=AB69_0846 NZ_JHDO01000069.1 Protein Homology CDS 57642 59924 . - 0 ID=cds-WP_000430057.1;Parent=gene-AB69_RS18060;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AB69_RS18060;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 60189 60449 . - . ID=gene-AB69_RS29695;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AB69_RS29695;old_locus_tag=AB69_0847 NZ_JHDO01000069.1 Protein Homology CDS 60189 60449 . - 0 ID=cds-WP_000710619.1;Parent=gene-AB69_RS29695;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AB69_RS29695;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 60725 61651 . + . ID=gene-AB69_RS18050;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AB69_RS18050;old_locus_tag=AB69_0848 NZ_JHDO01000069.1 Protein Homology CDS 60725 61651 . + 0 ID=cds-WP_001295299.1;Parent=gene-AB69_RS18050;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AB69_RS18050;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 61648 63873 . - . ID=gene-AB69_RS18045;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AB69_RS18045;old_locus_tag=AB69_0849 NZ_JHDO01000069.1 Protein Homology CDS 61648 63873 . - 0 ID=cds-WP_001267253.1;Parent=gene-AB69_RS18045;Dbxref=GenBank:WP_001267253.1;Name=WP_001267253.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AB69_RS18045;product=mechanosensitive channel protein;protein_id=WP_001267253.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 64134 64856 . - . ID=gene-AB69_RS18040;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AB69_RS18040;old_locus_tag=AB69_0850 NZ_JHDO01000069.1 Protein Homology CDS 64134 64856 . - 0 ID=cds-WP_000569083.1;Parent=gene-AB69_RS18040;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AB69_RS18040;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 64853 65512 . - . ID=gene-AB69_RS18035;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AB69_RS18035;old_locus_tag=AB69_0851 NZ_JHDO01000069.1 Protein Homology CDS 64853 65512 . - 0 ID=cds-WP_001159065.1;Parent=gene-AB69_RS18035;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AB69_RS18035;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 65651 66397 . - . ID=gene-AB69_RS18030;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AB69_RS18030;old_locus_tag=AB69_0852 NZ_JHDO01000069.1 Protein Homology CDS 65651 66397 . - 0 ID=cds-WP_000843866.1;Parent=gene-AB69_RS18030;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AB69_RS18030;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 66801 67304 . - . ID=gene-AB69_RS18025;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AB69_RS18025;old_locus_tag=AB69_0853 NZ_JHDO01000069.1 Protein Homology CDS 66801 67304 . - 0 ID=cds-WP_000100800.1;Parent=gene-AB69_RS18025;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AB69_RS18025;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 67603 68490 . - . ID=gene-AB69_RS18020;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AB69_RS18020;old_locus_tag=AB69_0854 NZ_JHDO01000069.1 Protein Homology CDS 67603 68490 . - 0 ID=cds-WP_001295297.1;Parent=gene-AB69_RS18020;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AB69_RS18020;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 68725 68790 . + . ID=gene-AB69_RS29700;Name=AB69_RS29700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29700 NZ_JHDO01000069.1 Protein Homology CDS 68725 68790 . + 0 ID=cds-WP_120795379.1;Parent=gene-AB69_RS29700;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AB69_RS29700;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 68843 69358 . + . ID=gene-AB69_RS18015;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AB69_RS18015;old_locus_tag=AB69_0855 NZ_JHDO01000069.1 Protein Homology CDS 68843 69358 . + 0 ID=cds-WP_001295296.1;Parent=gene-AB69_RS18015;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AB69_RS18015;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JHDO01000069.1 RefSeq gene 69461 70807 . + . ID=gene-AB69_RS18010;Name=AB69_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18010;old_locus_tag=AB69_0856 NZ_JHDO01000069.1 Protein Homology CDS 69461 70807 . + 0 ID=cds-WP_000483767.1;Parent=gene-AB69_RS18010;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB69_RS18010;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JHDO01000070.1 1 218899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000070.1 RefSeq region 1 218899 . + . ID=NZ_JHDO01000070.1:1..218899;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000070.1 RefSeq gene 1 331 . - . ID=gene-AB69_RS18005;Name=AB69_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS18005;old_locus_tag=AB69_0857;partial=true;start_range=.,1 NZ_JHDO01000070.1 Protein Homology CDS 1 331 . - 0 ID=cds-WP_001755656.1;Parent=gene-AB69_RS18005;Dbxref=GenBank:WP_001755656.1;Name=WP_001755656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AB69_RS18005;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_001755656.1;start_range=.,1;transl_table=11 NZ_JHDO01000070.1 RefSeq pseudogene 398 655 . - . ID=gene-AB69_RS18000;Name=AB69_RS18000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS18000;old_locus_tag=AB69_0858;partial=true;pseudo=true;start_range=.,398 NZ_JHDO01000070.1 Protein Homology CDS 398 655 . - 0 ID=cds-AB69_RS18000;Parent=gene-AB69_RS18000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AB69_RS18000;partial=true;product=transposase;pseudo=true;start_range=.,398;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 743 946 . - . ID=gene-AB69_RS29235;Name=AB69_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29235;old_locus_tag=AB69_0859 NZ_JHDO01000070.1 Protein Homology CDS 743 946 . - 0 ID=cds-WP_000355616.1;Parent=gene-AB69_RS29235;Dbxref=GenBank:WP_000355616.1;Name=WP_000355616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.6;locus_tag=AB69_RS29235;product=MFS transporter;protein_id=WP_000355616.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 969 1226 . + . ID=gene-AB69_RS17990;Name=AB69_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS17990;old_locus_tag=AB69_0860 NZ_JHDO01000070.1 Protein Homology CDS 969 1226 . + 0 ID=cds-WP_000254999.1;Parent=gene-AB69_RS17990;Dbxref=GenBank:WP_000254999.1;Name=WP_000254999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028057.6;locus_tag=AB69_RS17990;product=surface-adhesin E family protein;protein_id=WP_000254999.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 1279 1404 . - . ID=gene-AB69_RS28445;Name=ythA;gbkey=Gene;gene=ythA;gene_biotype=protein_coding;locus_tag=AB69_RS28445 NZ_JHDO01000070.1 Protein Homology CDS 1279 1404 . - 0 ID=cds-WP_000594405.1;Parent=gene-AB69_RS28445;Dbxref=GenBank:WP_000594405.1;Name=WP_000594405.1;gbkey=CDS;gene=ythA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491548.1;locus_tag=AB69_RS28445;product=protein YthA;protein_id=WP_000594405.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 1447 2565 . - . ID=gene-AB69_RS17985;Name=nanY;gbkey=Gene;gene=nanY;gene_biotype=protein_coding;gene_synonym=yjhC;locus_tag=AB69_RS17985;old_locus_tag=AB69_0861 NZ_JHDO01000070.1 Protein Homology CDS 1447 2565 . - 0 ID=cds-WP_000611568.1;Parent=gene-AB69_RS17985;Dbxref=GenBank:WP_000611568.1;Name=WP_000611568.1;gbkey=CDS;gene=nanY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418700.2;locus_tag=AB69_RS17985;product=2%2C7-anhydro-N-acetylneuraminate hydratase;protein_id=WP_000611568.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 2577 3794 . - . ID=gene-AB69_RS17980;Name=nanX;gbkey=Gene;gene=nanX;gene_biotype=protein_coding;locus_tag=AB69_RS17980;old_locus_tag=AB69_0862 NZ_JHDO01000070.1 Protein Homology CDS 2577 3794 . - 0 ID=cds-WP_000179691.1;Parent=gene-AB69_RS17980;Dbxref=GenBank:WP_000179691.1;Name=WP_000179691.1;gbkey=CDS;gene=nanX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418699.4;locus_tag=AB69_RS17980;product=MFS transporter;protein_id=WP_000179691.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 4403 5749 . + . ID=gene-AB69_RS17975;Name=AB69_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS17975;old_locus_tag=AB69_0864 NZ_JHDO01000070.1 Protein Homology CDS 4403 5749 . + 0 ID=cds-WP_000483767.1-2;Parent=gene-AB69_RS17975;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB69_RS17975;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 5787 7370 . - . ID=gene-AB69_RS17970;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AB69_RS17970;old_locus_tag=AB69_0865 NZ_JHDO01000070.1 Protein Homology CDS 5787 7370 . - 0 ID=cds-WP_001054678.1;Parent=gene-AB69_RS17970;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AB69_RS17970;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 7642 7770 . - . ID=gene-AB69_RS17965;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AB69_RS17965;old_locus_tag=AB69_0866 NZ_JHDO01000070.1 Protein Homology CDS 7642 7770 . - 0 ID=cds-WP_001001761.1;Parent=gene-AB69_RS17965;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AB69_RS17965;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 7956 8423 . + . ID=gene-AB69_RS17960;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AB69_RS17960;old_locus_tag=AB69_0867 NZ_JHDO01000070.1 Protein Homology CDS 7956 8423 . + 0 ID=cds-WP_000091016.1;Parent=gene-AB69_RS17960;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AB69_RS17960;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 8420 9538 . + . ID=gene-AB69_RS17955;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AB69_RS17955;old_locus_tag=AB69_0868 NZ_JHDO01000070.1 Protein Homology CDS 8420 9538 . + 0 ID=cds-WP_000056442.1;Parent=gene-AB69_RS17955;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AB69_RS17955;product=anion transporter;protein_id=WP_000056442.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 9597 10517 . - . ID=gene-AB69_RS17950;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AB69_RS17950;old_locus_tag=AB69_0869 NZ_JHDO01000070.1 Protein Homology CDS 9597 10517 . - 0 ID=cds-WP_001056384.1;Parent=gene-AB69_RS17950;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AB69_RS17950;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 10736 12328 . + . ID=gene-AB69_RS17945;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AB69_RS17945;old_locus_tag=AB69_0870 NZ_JHDO01000070.1 Protein Homology CDS 10736 12328 . + 0 ID=cds-WP_000961458.1;Parent=gene-AB69_RS17945;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AB69_RS17945;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 12564 13829 . - . ID=gene-AB69_RS17940;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AB69_RS17940;old_locus_tag=AB69_0871 NZ_JHDO01000070.1 Protein Homology CDS 12564 13829 . - 0 ID=cds-WP_032230957.1;Parent=gene-AB69_RS17940;Dbxref=GenBank:WP_032230957.1;Name=WP_032230957.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AB69_RS17940;product=DUF1479 domain-containing protein;protein_id=WP_032230957.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 13981 14796 . - . ID=gene-AB69_RS17935;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AB69_RS17935;old_locus_tag=AB69_0872 NZ_JHDO01000070.1 Protein Homology CDS 13981 14796 . - 0 ID=cds-WP_000114235.1;Parent=gene-AB69_RS17935;Dbxref=GenBank:WP_000114235.1;Name=WP_000114235.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706699.1;locus_tag=AB69_RS17935;product=sugar-phosphatase YbiV;protein_id=WP_000114235.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 14942 17374 . - . ID=gene-AB69_RS17930;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AB69_RS17930;old_locus_tag=AB69_0873 NZ_JHDO01000070.1 Protein Homology CDS 14942 17374 . - 0 ID=cds-WP_000209359.1;Parent=gene-AB69_RS17930;Dbxref=GenBank:WP_000209359.1;Name=WP_000209359.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AB69_RS17930;product=glycyl radical protein;protein_id=WP_000209359.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 17380 18279 . - . ID=gene-AB69_RS17925;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AB69_RS17925;old_locus_tag=AB69_0874 NZ_JHDO01000070.1 Protein Homology CDS 17380 18279 . - 0 ID=cds-WP_001295295.1;Parent=gene-AB69_RS17925;Dbxref=GenBank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AB69_RS17925;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 18410 19072 . + . ID=gene-AB69_RS17920;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB69_RS17920;old_locus_tag=AB69_0875 NZ_JHDO01000070.1 Protein Homology CDS 18410 19072 . + 0 ID=cds-WP_032230958.1;Parent=gene-AB69_RS17920;Dbxref=GenBank:WP_032230958.1;Name=WP_032230958.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AB69_RS17920;product=fructose-6-phosphate aldolase;protein_id=WP_032230958.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 19251 20000 . - . ID=gene-AB69_RS17915;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AB69_RS17915;old_locus_tag=AB69_0876 NZ_JHDO01000070.1 Protein Homology CDS 19251 20000 . - 0 ID=cds-WP_000829261.1;Parent=gene-AB69_RS17915;Dbxref=GenBank:WP_000829261.1;Name=WP_000829261.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=AB69_RS17915;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829261.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 20000 21235 . - . ID=gene-AB69_RS17910;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AB69_RS17910;old_locus_tag=AB69_0877 NZ_JHDO01000070.1 Protein Homology CDS 20000 21235 . - 0 ID=cds-WP_000397381.1;Parent=gene-AB69_RS17910;Dbxref=GenBank:WP_000397381.1;Name=WP_000397381.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AB69_RS17910;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397381.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 21439 22404 . + . ID=gene-AB69_RS17905;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AB69_RS17905;old_locus_tag=AB69_0878 NZ_JHDO01000070.1 Protein Homology CDS 21439 22404 . + 0 ID=cds-WP_000513775.1;Parent=gene-AB69_RS17905;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AB69_RS17905;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 22391 24262 . + . ID=gene-AB69_RS17900;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AB69_RS17900;old_locus_tag=AB69_0879 NZ_JHDO01000070.1 Protein Homology CDS 22391 24262 . + 0 ID=cds-WP_001296993.1;Parent=gene-AB69_RS17900;Dbxref=GenBank:WP_001296993.1;Name=WP_001296993.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AB69_RS17900;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001296993.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 24282 25820 . + . ID=gene-AB69_RS17895;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AB69_RS17895;old_locus_tag=AB69_0880 NZ_JHDO01000070.1 Protein Homology CDS 24282 25820 . + 0 ID=cds-WP_000090130.1;Parent=gene-AB69_RS17895;Dbxref=GenBank:WP_000090130.1;Name=WP_000090130.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706707.2;locus_tag=AB69_RS17895;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090130.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 25838 26758 . + . ID=gene-AB69_RS17890;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AB69_RS17890;old_locus_tag=AB69_0881 NZ_JHDO01000070.1 Protein Homology CDS 25838 26758 . + 0 ID=cds-WP_032230960.1;Parent=gene-AB69_RS17890;Dbxref=GenBank:WP_032230960.1;Name=WP_032230960.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AB69_RS17890;product=glutathione ABC transporter permease GsiC;protein_id=WP_032230960.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 26761 27672 . + . ID=gene-AB69_RS17885;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AB69_RS17885;old_locus_tag=AB69_0882 NZ_JHDO01000070.1 Protein Homology CDS 26761 27672 . + 0 ID=cds-WP_001236044.1;Parent=gene-AB69_RS17885;Dbxref=GenBank:WP_001236044.1;Name=WP_001236044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=AB69_RS17885;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236044.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 27850 30198 . + . ID=gene-AB69_RS17880;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AB69_RS17880;old_locus_tag=AB69_0883 NZ_JHDO01000070.1 Protein Homology CDS 27850 30198 . + 0 ID=cds-WP_001354493.1;Parent=gene-AB69_RS17880;Dbxref=GenBank:WP_001354493.1;Name=WP_001354493.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AB69_RS17880;product=sensor domain-containing phosphodiesterase;protein_id=WP_001354493.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 30206 31534 . + . ID=gene-AB69_RS17875;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AB69_RS17875;old_locus_tag=AB69_0884 NZ_JHDO01000070.1 Protein Homology CDS 30206 31534 . + 0 ID=cds-WP_032230961.1;Parent=gene-AB69_RS17875;Dbxref=GenBank:WP_032230961.1;Name=WP_032230961.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308940.1;locus_tag=AB69_RS17875;product=GGDEF domain-containing protein;protein_id=WP_032230961.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 31581 32906 . - . ID=gene-AB69_RS17870;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AB69_RS17870;old_locus_tag=AB69_0885 NZ_JHDO01000070.1 Protein Homology CDS 31581 32906 . - 0 ID=cds-WP_000049367.1;Parent=gene-AB69_RS17870;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AB69_RS17870;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 33119 33502 . + . ID=gene-AB69_RS17865;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AB69_RS17865;old_locus_tag=AB69_0886 NZ_JHDO01000070.1 Protein Homology CDS 33119 33502 . + 0 ID=cds-WP_000497137.1;Parent=gene-AB69_RS17865;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AB69_RS17865;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 33613 34728 . + . ID=gene-AB69_RS17860;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AB69_RS17860;old_locus_tag=AB69_0887 NZ_JHDO01000070.1 Protein Homology CDS 33613 34728 . + 0 ID=cds-WP_032230963.1;Parent=gene-AB69_RS17860;Dbxref=GenBank:WP_032230963.1;Name=WP_032230963.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308944.1;locus_tag=AB69_RS17860;product=aldose sugar dehydrogenase YliI;protein_id=WP_032230963.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 34725 35351 . - . ID=gene-AB69_RS17855;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AB69_RS17855;old_locus_tag=AB69_0888 NZ_JHDO01000070.1 Protein Homology CDS 34725 35351 . - 0 ID=cds-WP_001295292.1;Parent=gene-AB69_RS17855;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AB69_RS17855;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 35598 36800 . + . ID=gene-AB69_RS17850;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AB69_RS17850;old_locus_tag=AB69_0889 NZ_JHDO01000070.1 Protein Homology CDS 35598 36800 . + 0 ID=cds-WP_000195961.1;Parent=gene-AB69_RS17850;Dbxref=GenBank:WP_000195961.1;Name=WP_000195961.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=AB69_RS17850;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195961.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 36847 37605 . - . ID=gene-AB69_RS17845;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AB69_RS17845;old_locus_tag=AB69_0890 NZ_JHDO01000070.1 Protein Homology CDS 36847 37605 . - 0 ID=cds-WP_000450121.1;Parent=gene-AB69_RS17845;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AB69_RS17845;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 37663 38259 . - . ID=gene-AB69_RS17840;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AB69_RS17840;old_locus_tag=AB69_0891 NZ_JHDO01000070.1 Protein Homology CDS 37663 38259 . - 0 ID=cds-WP_001295291.1;Parent=gene-AB69_RS17840;Dbxref=GenBank:WP_001295291.1;Name=WP_001295291.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AB69_RS17840;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 38544 39776 . + . ID=gene-AB69_RS17835;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AB69_RS17835;old_locus_tag=AB69_0892 NZ_JHDO01000070.1 Protein Homology CDS 38544 39776 . + 0 ID=cds-WP_001180081.1;Parent=gene-AB69_RS17835;Dbxref=GenBank:WP_001180081.1;Name=WP_001180081.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AB69_RS17835;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180081.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 39817 40101 . - . ID=gene-AB69_RS17830;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AB69_RS17830;old_locus_tag=AB69_0893 NZ_JHDO01000070.1 Protein Homology CDS 39817 40101 . - 0 ID=cds-WP_000605478.1;Parent=gene-AB69_RS17830;Dbxref=GenBank:WP_000605478.1;Name=WP_000605478.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AB69_RS17830;product=protein YbjH;protein_id=WP_000605478.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 40187 41002 . - . ID=gene-AB69_RS17825;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AB69_RS17825;old_locus_tag=AB69_0894 NZ_JHDO01000070.1 Protein Homology CDS 40187 41002 . - 0 ID=cds-WP_001299614.1;Parent=gene-AB69_RS17825;Dbxref=GenBank:WP_001299614.1;Name=WP_001299614.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AB69_RS17825;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_001299614.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 41002 42210 . - . ID=gene-AB69_RS17820;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AB69_RS17820;old_locus_tag=AB69_0895 NZ_JHDO01000070.1 Protein Homology CDS 41002 42210 . - 0 ID=cds-WP_000217844.1;Parent=gene-AB69_RS17820;Dbxref=GenBank:WP_000217844.1;Name=WP_000217844.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AB69_RS17820;product=MFS transporter;protein_id=WP_000217844.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 42294 42830 . + . ID=gene-AB69_RS17815;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AB69_RS17815;old_locus_tag=AB69_0896 NZ_JHDO01000070.1 Protein Homology CDS 42294 42830 . + 0 ID=cds-WP_001295289.1;Parent=gene-AB69_RS17815;Dbxref=GenBank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AB69_RS17815;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 43005 44690 . - . ID=gene-AB69_RS17810;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AB69_RS17810;old_locus_tag=AB69_0897 NZ_JHDO01000070.1 Protein Homology CDS 43005 44690 . - 0 ID=cds-WP_001024876.1;Parent=gene-AB69_RS17810;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AB69_RS17810;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 44960 45337 . + . ID=gene-AB69_RS17805;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AB69_RS17805;old_locus_tag=AB69_0898 NZ_JHDO01000070.1 Protein Homology CDS 44960 45337 . + 0 ID=cds-WP_000681108.1;Parent=gene-AB69_RS17805;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AB69_RS17805;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 45367 45624 . - . ID=gene-AB69_RS17800;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AB69_RS17800;old_locus_tag=AB69_0899 NZ_JHDO01000070.1 Protein Homology CDS 45367 45624 . - 0 ID=cds-WP_001195240.1;Parent=gene-AB69_RS17800;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AB69_RS17800;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 45784 46071 . + . ID=gene-AB69_RS17795;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AB69_RS17795;old_locus_tag=AB69_0900 NZ_JHDO01000070.1 Protein Homology CDS 45784 46071 . + 0 ID=cds-WP_001201560.1;Parent=gene-AB69_RS17795;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AB69_RS17795;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 46055 46777 . + . ID=gene-AB69_RS17790;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AB69_RS17790;old_locus_tag=AB69_0901 NZ_JHDO01000070.1 Protein Homology CDS 46055 46777 . + 0 ID=cds-WP_000189159.1;Parent=gene-AB69_RS17790;Dbxref=GenBank:WP_000189159.1;Name=WP_000189159.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AB69_RS17790;product=nitroreductase NfsA;protein_id=WP_000189159.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 46838 47740 . + . ID=gene-AB69_RS17785;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AB69_RS17785;old_locus_tag=AB69_0902 NZ_JHDO01000070.1 Protein Homology CDS 46838 47740 . + 0 ID=cds-WP_032230965.1;Parent=gene-AB69_RS17785;Dbxref=GenBank:WP_032230965.1;Name=WP_032230965.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AB69_RS17785;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_032230965.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 47828 48304 . + . ID=gene-AB69_RS17780;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AB69_RS17780;old_locus_tag=AB69_0903 NZ_JHDO01000070.1 Protein Homology CDS 47828 48304 . + 0 ID=cds-WP_000203025.1;Parent=gene-AB69_RS17780;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AB69_RS17780;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 48655 49767 . + . ID=gene-AB69_RS17770;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AB69_RS17770;old_locus_tag=AB69_0906 NZ_JHDO01000070.1 Protein Homology CDS 48655 49767 . + 0 ID=cds-WP_000126072.1;Parent=gene-AB69_RS17770;Dbxref=GenBank:WP_000126072.1;Name=WP_000126072.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AB69_RS17770;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126072.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 49862 50995 . + . ID=gene-AB69_RS17765;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AB69_RS17765;old_locus_tag=AB69_0907 NZ_JHDO01000070.1 Protein Homology CDS 49862 50995 . + 0 ID=cds-WP_000996005.1;Parent=gene-AB69_RS17765;Dbxref=GenBank:WP_000996005.1;Name=WP_000996005.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AB69_RS17765;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 51005 51958 . + . ID=gene-AB69_RS17760;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AB69_RS17760;old_locus_tag=AB69_0908 NZ_JHDO01000070.1 Protein Homology CDS 51005 51958 . + 0 ID=cds-WP_000105430.1;Parent=gene-AB69_RS17760;Dbxref=GenBank:WP_000105430.1;Name=WP_000105430.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415377.1;locus_tag=AB69_RS17760;product=putrescine ABC transporter permease PotH;protein_id=WP_000105430.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 51955 52800 . + . ID=gene-AB69_RS17755;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AB69_RS17755;old_locus_tag=AB69_0909 NZ_JHDO01000070.1 Protein Homology CDS 51955 52800 . + 0 ID=cds-WP_001061658.1;Parent=gene-AB69_RS17755;Dbxref=GenBank:WP_001061658.1;Name=WP_001061658.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AB69_RS17755;product=putrescine ABC transporter permease PotI;protein_id=WP_001061658.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 52860 53348 . + . ID=gene-AB69_RS17750;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AB69_RS17750;old_locus_tag=AB69_0910 NZ_JHDO01000070.1 Protein Homology CDS 52860 53348 . + 0 ID=cds-WP_000389260.1;Parent=gene-AB69_RS17750;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AB69_RS17750;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 53389 54516 . + . ID=gene-AB69_RS17745;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AB69_RS17745;old_locus_tag=AB69_0911 NZ_JHDO01000070.1 Protein Homology CDS 53389 54516 . + 0 ID=cds-WP_032218368.1;Parent=gene-AB69_RS17745;Dbxref=GenBank:WP_032218368.1;Name=WP_032218368.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415380.1;locus_tag=AB69_RS17745;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_032218368.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 54715 55446 . - . ID=gene-AB69_RS17740;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AB69_RS17740;old_locus_tag=AB69_0912 NZ_JHDO01000070.1 Protein Homology CDS 54715 55446 . - 0 ID=cds-WP_001295339.1;Parent=gene-AB69_RS17740;Dbxref=GenBank:WP_001295339.1;Name=WP_001295339.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AB69_RS17740;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295339.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 55737 56405 . - . ID=gene-AB69_RS17735;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AB69_RS17735;old_locus_tag=AB69_0913 NZ_JHDO01000070.1 Protein Homology CDS 55737 56405 . - 0 ID=cds-WP_000464491.1;Parent=gene-AB69_RS17735;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AB69_RS17735;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 56405 57121 . - . ID=gene-AB69_RS17730;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AB69_RS17730;old_locus_tag=AB69_0914 NZ_JHDO01000070.1 Protein Homology CDS 56405 57121 . - 0 ID=cds-WP_001001691.1;Parent=gene-AB69_RS17730;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AB69_RS17730;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 57128 57859 . - . ID=gene-AB69_RS17725;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AB69_RS17725;old_locus_tag=AB69_0915 NZ_JHDO01000070.1 Protein Homology CDS 57128 57859 . - 0 ID=cds-WP_000756569.1;Parent=gene-AB69_RS17725;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AB69_RS17725;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 57877 58605 . - . ID=gene-AB69_RS17720;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AB69_RS17720;old_locus_tag=AB69_0916 NZ_JHDO01000070.1 Protein Homology CDS 57877 58605 . - 0 ID=cds-WP_000027205.1;Parent=gene-AB69_RS17720;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AB69_RS17720;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 58823 59338 . - . ID=gene-AB69_RS17715;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AB69_RS17715;old_locus_tag=AB69_0917 NZ_JHDO01000070.1 Protein Homology CDS 58823 59338 . - 0 ID=cds-WP_001270734.1;Parent=gene-AB69_RS17715;Dbxref=GenBank:WP_001270734.1;Name=WP_001270734.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AB69_RS17715;product=lipoprotein;protein_id=WP_001270734.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 59464 59787 . + . ID=gene-AB69_RS17710;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AB69_RS17710;old_locus_tag=AB69_0918 NZ_JHDO01000070.1 Protein Homology CDS 59464 59787 . + 0 ID=cds-WP_001160737.1;Parent=gene-AB69_RS17710;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AB69_RS17710;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 59784 60614 . + . ID=gene-AB69_RS17705;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AB69_RS17705;old_locus_tag=AB69_0919 NZ_JHDO01000070.1 Protein Homology CDS 59784 60614 . + 0 ID=cds-WP_001252135.1;Parent=gene-AB69_RS17705;Dbxref=GenBank:WP_001252135.1;Name=WP_001252135.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AB69_RS17705;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001252135.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 60611 61624 . - . ID=gene-AB69_RS17700;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AB69_RS17700;old_locus_tag=AB69_0920 NZ_JHDO01000070.1 Protein Homology CDS 60611 61624 . - 0 ID=cds-WP_001338420.1;Parent=gene-AB69_RS17700;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AB69_RS17700;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 61723 63153 . - . ID=gene-AB69_RS17695;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AB69_RS17695;old_locus_tag=AB69_0921 NZ_JHDO01000070.1 Protein Homology CDS 61723 63153 . - 0 ID=cds-WP_001136554.1;Parent=gene-AB69_RS17695;Dbxref=GenBank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AB69_RS17695;product=SDR family oxidoreductase;protein_id=WP_001136554.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 63164 64165 . - . ID=gene-AB69_RS17690;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AB69_RS17690;old_locus_tag=AB69_0922 NZ_JHDO01000070.1 Protein Homology CDS 63164 64165 . - 0 ID=cds-WP_000566376.1;Parent=gene-AB69_RS17690;Dbxref=GenBank:WP_000566376.1;Name=WP_000566376.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415391.1;locus_tag=AB69_RS17690;product=low-specificity L-threonine aldolase;protein_id=WP_000566376.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 64202 65920 . - . ID=gene-AB69_RS17685;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AB69_RS17685;old_locus_tag=AB69_0923 NZ_JHDO01000070.1 Protein Homology CDS 64202 65920 . - 0 ID=cds-WP_000815337.1;Parent=gene-AB69_RS17685;Dbxref=GenBank:WP_000815337.1;Name=WP_000815337.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AB69_RS17685;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815337.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 66053 67021 . - . ID=gene-AB69_RS17680;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AB69_RS17680;old_locus_tag=AB69_0924 NZ_JHDO01000070.1 Protein Homology CDS 66053 67021 . - 0 ID=cds-WP_000178677.1;Parent=gene-AB69_RS17680;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AB69_RS17680;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 67033 68685 . - . ID=gene-AB69_RS17675;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AB69_RS17675;old_locus_tag=AB69_0925 NZ_JHDO01000070.1 Protein Homology CDS 67033 68685 . - 0 ID=cds-WP_000458809.1;Parent=gene-AB69_RS17675;Dbxref=GenBank:WP_000458809.1;Name=WP_000458809.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AB69_RS17675;product=hydroxylamine reductase;protein_id=WP_000458809.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 68829 69728 . - . ID=gene-AB69_RS17670;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AB69_RS17670;old_locus_tag=AB69_0926 NZ_JHDO01000070.1 Protein Homology CDS 68829 69728 . - 0 ID=cds-WP_000491142.1;Parent=gene-AB69_RS17670;Dbxref=GenBank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AB69_RS17670;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JHDO01000070.1 RefSeq pseudogene 70223 70918 . - . ID=gene-AB69_RS0123750;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=pseudogene;locus_tag=AB69_RS0123750;pseudo=true NZ_JHDO01000070.1 Protein Homology CDS 70223 70918 . - 0 ID=cds-AB69_RS0123750;Parent=gene-AB69_RS0123750;Note=internal stop;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AB69_RS0123750;product=aquaporin Z;pseudo=true;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 71344 73002 . + . ID=gene-AB69_RS17665;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AB69_RS17665;old_locus_tag=AB69_0929 NZ_JHDO01000070.1 Protein Homology CDS 71344 73002 . + 0 ID=cds-WP_032230967.1;Parent=gene-AB69_RS17665;Dbxref=GenBank:WP_032230967.1;Name=WP_032230967.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AB69_RS17665;product=ATP-dependent endonuclease;protein_id=WP_032230967.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 72999 73955 . - . ID=gene-AB69_RS17660;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AB69_RS17660;old_locus_tag=AB69_0930 NZ_JHDO01000070.1 Protein Homology CDS 72999 73955 . - 0 ID=cds-WP_139301659.1;Parent=gene-AB69_RS17660;Dbxref=GenBank:WP_139301659.1;Name=WP_139301659.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AB69_RS17660;product=VirK/YbjX family protein;protein_id=WP_139301659.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 74106 75221 . + . ID=gene-AB69_RS17655;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AB69_RS17655;old_locus_tag=AB69_0931 NZ_JHDO01000070.1 Protein Homology CDS 74106 75221 . + 0 ID=cds-WP_000746443.1;Parent=gene-AB69_RS17655;Dbxref=GenBank:WP_000746443.1;Name=WP_000746443.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415399.4;locus_tag=AB69_RS17655;product=macrolide transporter subunit MacA;protein_id=WP_000746443.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 75218 77164 . + . ID=gene-AB69_RS17650;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AB69_RS17650;old_locus_tag=AB69_0932 NZ_JHDO01000070.1 Protein Homology CDS 75218 77164 . + 0 ID=cds-WP_032230971.1;Parent=gene-AB69_RS17650;Dbxref=GenBank:WP_032230971.1;Name=WP_032230971.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415400.1;locus_tag=AB69_RS17650;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_032230971.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 77237 77461 . - . ID=gene-AB69_RS17645;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AB69_RS17645;old_locus_tag=AB69_0933 NZ_JHDO01000070.1 Protein Homology CDS 77237 77461 . - 0 ID=cds-WP_000410785.1;Parent=gene-AB69_RS17645;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AB69_RS17645;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 77611 77685 . + . ID=gene-AB69_RS30205;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AB69_RS30205 NZ_JHDO01000070.1 Protein Homology CDS 77611 77685 . + 0 ID=cds-WP_001406719.1;Parent=gene-AB69_RS30205;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AB69_RS30205;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 77784 78104 . + . ID=gene-AB69_RS17640;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AB69_RS17640;old_locus_tag=AB69_0934 NZ_JHDO01000070.1 Protein Homology CDS 77784 78104 . + 0 ID=cds-WP_000520781.1;Parent=gene-AB69_RS17640;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AB69_RS17640;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 78135 80411 . + . ID=gene-AB69_RS17635;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AB69_RS17635;old_locus_tag=AB69_0935 NZ_JHDO01000070.1 Protein Homology CDS 78135 80411 . + 0 ID=cds-WP_000934041.1;Parent=gene-AB69_RS17635;Dbxref=GenBank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AB69_RS17635;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 80755 80842 . - . ID=gene-AB69_RS17630;Name=AB69_RS17630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS17630;old_locus_tag=AB69_0936 NZ_JHDO01000070.1 tRNAscan-SE tRNA 80755 80842 . - . ID=rna-AB69_RS17630;Parent=gene-AB69_RS17630;anticodon=(pos:complement(80806..80808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS17630;product=tRNA-Ser NZ_JHDO01000070.1 tRNAscan-SE exon 80755 80842 . - . ID=exon-AB69_RS17630-1;Parent=rna-AB69_RS17630;anticodon=(pos:complement(80806..80808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS17630;product=tRNA-Ser NZ_JHDO01000070.1 RefSeq gene 81096 81314 . - . ID=gene-AB69_RS17625;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AB69_RS17625;old_locus_tag=AB69_0937 NZ_JHDO01000070.1 Protein Homology CDS 81096 81314 . - 0 ID=cds-WP_001040187.1;Parent=gene-AB69_RS17625;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AB69_RS17625;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 81599 82303 . - . ID=gene-AB69_RS17620;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AB69_RS17620;old_locus_tag=AB69_0938 NZ_JHDO01000070.1 Protein Homology CDS 81599 82303 . - 0 ID=cds-WP_001241678.1;Parent=gene-AB69_RS17620;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AB69_RS17620;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 82345 84066 . - . ID=gene-AB69_RS17615;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AB69_RS17615;old_locus_tag=AB69_0939 NZ_JHDO01000070.1 Protein Homology CDS 82345 84066 . - 0 ID=cds-WP_001202175.1;Parent=gene-AB69_RS17615;Dbxref=GenBank:WP_001202175.1;Name=WP_001202175.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AB69_RS17615;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202175.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 84067 85833 . - . ID=gene-AB69_RS17610;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AB69_RS17610;old_locus_tag=AB69_0940 NZ_JHDO01000070.1 Protein Homology CDS 84067 85833 . - 0 ID=cds-WP_001043598.1;Parent=gene-AB69_RS17610;Dbxref=GenBank:WP_001043598.1;Name=WP_001043598.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415407.1;locus_tag=AB69_RS17610;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043598.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 85956 86921 . - . ID=gene-AB69_RS17605;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AB69_RS17605;old_locus_tag=AB69_0941 NZ_JHDO01000070.1 Protein Homology CDS 85956 86921 . - 0 ID=cds-WP_000537418.1;Parent=gene-AB69_RS17605;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AB69_RS17605;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 87466 87960 . + . ID=gene-AB69_RS17600;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AB69_RS17600;old_locus_tag=AB69_0943 NZ_JHDO01000070.1 Protein Homology CDS 87466 87960 . + 0 ID=cds-WP_000228473.1;Parent=gene-AB69_RS17600;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AB69_RS17600;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 88095 92084 . + . ID=gene-AB69_RS17595;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AB69_RS17595;old_locus_tag=AB69_0944 NZ_JHDO01000070.1 Protein Homology CDS 88095 92084 . + 0 ID=cds-WP_000077038.1;Parent=gene-AB69_RS17595;Dbxref=GenBank:WP_000077038.1;Name=WP_000077038.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AB69_RS17595;product=DNA translocase FtsK;protein_id=WP_000077038.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 92243 92854 . + . ID=gene-AB69_RS17590;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AB69_RS17590;old_locus_tag=AB69_0945 NZ_JHDO01000070.1 Protein Homology CDS 92243 92854 . + 0 ID=cds-WP_001295343.1;Parent=gene-AB69_RS17590;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AB69_RS17590;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 92865 94208 . + . ID=gene-AB69_RS17585;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AB69_RS17585;old_locus_tag=AB69_0946 NZ_JHDO01000070.1 Protein Homology CDS 92865 94208 . + 0 ID=cds-WP_000067755.1;Parent=gene-AB69_RS17585;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AB69_RS17585;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 94299 95591 . + . ID=gene-AB69_RS17580;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AB69_RS17580;old_locus_tag=AB69_0947 NZ_JHDO01000070.1 Protein Homology CDS 94299 95591 . + 0 ID=cds-WP_000886683.1;Parent=gene-AB69_RS17580;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AB69_RS17580;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 95830 98274 . + . ID=gene-AB69_RS17575;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AB69_RS17575;old_locus_tag=AB69_0948 NZ_JHDO01000070.1 Protein Homology CDS 95830 98274 . + 0 ID=cds-WP_032230972.1;Parent=gene-AB69_RS17575;Dbxref=GenBank:WP_032230972.1;Name=WP_032230972.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AB69_RS17575;product=dimethylsulfoxide reductase subunit A;protein_id=WP_032230972.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 98285 98902 . + . ID=gene-AB69_RS17570;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AB69_RS17570;old_locus_tag=AB69_0949 NZ_JHDO01000070.1 Protein Homology CDS 98285 98902 . + 0 ID=cds-WP_000213098.1;Parent=gene-AB69_RS17570;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB69_RS17570;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 98904 99767 . + . ID=gene-AB69_RS17565;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AB69_RS17565;old_locus_tag=AB69_0950 NZ_JHDO01000070.1 Protein Homology CDS 98904 99767 . + 0 ID=cds-WP_000534637.1;Parent=gene-AB69_RS17565;Dbxref=GenBank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AB69_RS17565;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534637.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 99802 100428 . - . ID=gene-AB69_RS17560;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AB69_RS17560;old_locus_tag=AB69_0951 NZ_JHDO01000070.1 Protein Homology CDS 99802 100428 . - 0 ID=cds-WP_032230973.1;Parent=gene-AB69_RS17560;Dbxref=GenBank:WP_032230973.1;Name=WP_032230973.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AB69_RS17560;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_032230973.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 100742 101890 . + . ID=gene-AB69_RS17555;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AB69_RS17555;old_locus_tag=AB69_0952 NZ_JHDO01000070.1 Protein Homology CDS 100742 101890 . + 0 ID=cds-WP_000109259.1;Parent=gene-AB69_RS17555;Dbxref=GenBank:WP_000109259.1;Name=WP_000109259.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415418.1;locus_tag=AB69_RS17555;product=MFS transporter;protein_id=WP_000109259.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 102100 103530 . + . ID=gene-AB69_RS17550;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AB69_RS17550;old_locus_tag=AB69_0953 NZ_JHDO01000070.1 Protein Homology CDS 102100 103530 . + 0 ID=cds-WP_000918506.1;Parent=gene-AB69_RS17550;Dbxref=GenBank:WP_000918506.1;Name=WP_000918506.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AB69_RS17550;product=APC family permease;protein_id=WP_000918506.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 103531 104439 . - . ID=gene-AB69_RS17545;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AB69_RS17545;old_locus_tag=AB69_0954 NZ_JHDO01000070.1 Protein Homology CDS 103531 104439 . - 0 ID=cds-WP_001242684.1;Parent=gene-AB69_RS17545;Dbxref=GenBank:WP_001242684.1;Name=WP_001242684.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AB69_RS17545;product=LysR family transcriptional regulator;protein_id=WP_001242684.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 104539 105129 . + . ID=gene-AB69_RS17540;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=AB69_RS17540;old_locus_tag=AB69_0955 NZ_JHDO01000070.1 Protein Homology CDS 104539 105129 . + 0 ID=cds-WP_001190363.1;Parent=gene-AB69_RS17540;Dbxref=GenBank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AB69_RS17540;product=NAD(P)H oxidoreductase;protein_id=WP_001190363.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 105211 105951 . - . ID=gene-AB69_RS17535;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AB69_RS17535;old_locus_tag=AB69_0956 NZ_JHDO01000070.1 Protein Homology CDS 105211 105951 . - 0 ID=cds-WP_000111043.1;Parent=gene-AB69_RS17535;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AB69_RS17535;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 106143 108425 . - . ID=gene-AB69_RS17530;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AB69_RS17530;old_locus_tag=AB69_0957 NZ_JHDO01000070.1 Protein Homology CDS 106143 108425 . - 0 ID=cds-WP_001292822.1;Parent=gene-AB69_RS17530;Dbxref=GenBank:WP_001292822.1;Name=WP_001292822.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=AB69_RS17530;product=formate C-acetyltransferase;protein_id=WP_001292822.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 108480 109337 . - . ID=gene-AB69_RS29240;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AB69_RS29240;old_locus_tag=AB69_0958 NZ_JHDO01000070.1 Protein Homology CDS 108480 109337 . - 0 ID=cds-WP_000642546.1;Parent=gene-AB69_RS29240;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AB69_RS29240;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 109743 111503 . - . ID=gene-AB69_RS17520;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AB69_RS17520;old_locus_tag=AB69_0959 NZ_JHDO01000070.1 Protein Homology CDS 109743 111503 . - 0 ID=cds-WP_001295344.1;Parent=gene-AB69_RS17520;Dbxref=GenBank:WP_001295344.1;Name=WP_001295344.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AB69_RS17520;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001295344.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 111633 112325 . + . ID=gene-AB69_RS17515;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AB69_RS17515;old_locus_tag=AB69_0960 NZ_JHDO01000070.1 Protein Homology CDS 111633 112325 . + 0 ID=cds-WP_000642849.1;Parent=gene-AB69_RS17515;Dbxref=GenBank:WP_000642849.1;Name=WP_000642849.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AB69_RS17515;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 112524 113612 . + . ID=gene-AB69_RS17510;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AB69_RS17510;old_locus_tag=AB69_0961 NZ_JHDO01000070.1 Protein Homology CDS 112524 113612 . + 0 ID=cds-WP_000057149.1;Parent=gene-AB69_RS17510;Dbxref=GenBank:WP_000057149.1;Name=WP_000057149.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706825.1;locus_tag=AB69_RS17510;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057149.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 113683 114966 . + . ID=gene-AB69_RS17505;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AB69_RS17505;old_locus_tag=AB69_0962 NZ_JHDO01000070.1 Protein Homology CDS 113683 114966 . + 0 ID=cds-WP_000445231.1;Parent=gene-AB69_RS17505;Dbxref=GenBank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AB69_RS17505;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 115135 115899 . + . ID=gene-AB69_RS17500;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AB69_RS17500;old_locus_tag=AB69_0963 NZ_JHDO01000070.1 Protein Homology CDS 115135 115899 . + 0 ID=cds-WP_001295345.1;Parent=gene-AB69_RS17500;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AB69_RS17500;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 116072 116755 . + . ID=gene-AB69_RS17495;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AB69_RS17495;old_locus_tag=AB69_0964 NZ_JHDO01000070.1 Protein Homology CDS 116072 116755 . + 0 ID=cds-WP_000125016.1;Parent=gene-AB69_RS17495;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AB69_RS17495;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 116866 118539 . + . ID=gene-AB69_RS17490;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AB69_RS17490;old_locus_tag=AB69_0965 NZ_JHDO01000070.1 Protein Homology CDS 116866 118539 . + 0 ID=cds-WP_000140327.1;Parent=gene-AB69_RS17490;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AB69_RS17490;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 118699 118983 . + . ID=gene-AB69_RS17485;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AB69_RS17485;old_locus_tag=AB69_0966 NZ_JHDO01000070.1 Protein Homology CDS 118699 118983 . + 0 ID=cds-WP_000167336.1;Parent=gene-AB69_RS17485;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AB69_RS17485;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 119191 121455 . + . ID=gene-AB69_RS17480;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AB69_RS17480;old_locus_tag=AB69_0967 NZ_JHDO01000070.1 Protein Homology CDS 119191 121455 . + 0 ID=cds-WP_000705764.1;Parent=gene-AB69_RS17480;Dbxref=GenBank:WP_000705764.1;Name=WP_000705764.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AB69_RS17480;product=ComEC family protein;protein_id=WP_000705764.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 121492 123240 . + . ID=gene-AB69_RS17475;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AB69_RS17475;old_locus_tag=AB69_0968 NZ_JHDO01000070.1 Protein Homology CDS 121492 123240 . + 0 ID=cds-WP_000551270.1;Parent=gene-AB69_RS17475;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AB69_RS17475;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 123237 124223 . + . ID=gene-AB69_RS17470;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AB69_RS17470;old_locus_tag=AB69_0969 NZ_JHDO01000070.1 Protein Homology CDS 123237 124223 . + 0 ID=cds-WP_000570541.1;Parent=gene-AB69_RS17470;Dbxref=GenBank:WP_000570541.1;Name=WP_000570541.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309025.1;locus_tag=AB69_RS17470;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570541.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 124260 125492 . + . ID=gene-AB69_RS17465;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AB69_RS17465;old_locus_tag=AB69_0970 NZ_JHDO01000070.1 Protein Homology CDS 124260 125492 . + 0 ID=cds-WP_000056534.1;Parent=gene-AB69_RS17465;Dbxref=GenBank:WP_000056534.1;Name=WP_000056534.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AB69_RS17465;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056534.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 125544 125726 . + . ID=gene-AB69_RS17460;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AB69_RS17460;old_locus_tag=AB69_0971 NZ_JHDO01000070.1 Protein Homology CDS 125544 125726 . + 0 ID=cds-WP_000350058.1;Parent=gene-AB69_RS17460;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AB69_RS17460;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 125723 126469 . + . ID=gene-AB69_RS17455;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AB69_RS17455;old_locus_tag=AB69_0972 NZ_JHDO01000070.1 Protein Homology CDS 125723 126469 . + 0 ID=cds-WP_000011607.1;Parent=gene-AB69_RS17455;Dbxref=GenBank:WP_000011607.1;Name=WP_000011607.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=AB69_RS17455;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011607.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 126623 127516 . + . ID=gene-AB69_RS17450;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AB69_RS17450;old_locus_tag=AB69_0973 NZ_JHDO01000070.1 Protein Homology CDS 126623 127516 . + 0 ID=cds-WP_000436922.1;Parent=gene-AB69_RS17450;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AB69_RS17450;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 127493 128272 . - . ID=gene-AB69_RS17445;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AB69_RS17445;old_locus_tag=AB69_0974 NZ_JHDO01000070.1 Protein Homology CDS 127493 128272 . - 0 ID=cds-WP_000899600.1;Parent=gene-AB69_RS17445;Dbxref=GenBank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=AB69_RS17445;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 128408 129193 . + . ID=gene-AB69_RS17440;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AB69_RS17440;old_locus_tag=AB69_0975 NZ_JHDO01000070.1 Protein Homology CDS 128408 129193 . + 0 ID=cds-WP_001491177.1;Parent=gene-AB69_RS17440;Dbxref=GenBank:WP_001491177.1;Name=WP_001491177.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AB69_RS17440;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001491177.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 129190 130512 . + . ID=gene-AB69_RS17435;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AB69_RS17435;old_locus_tag=AB69_0976 NZ_JHDO01000070.1 Protein Homology CDS 129190 130512 . + 0 ID=cds-WP_001288850.1;Parent=gene-AB69_RS17435;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AB69_RS17435;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 130493 131197 . + . ID=gene-AB69_RS17430;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AB69_RS17430;old_locus_tag=AB69_0977 NZ_JHDO01000070.1 Protein Homology CDS 130493 131197 . + 0 ID=cds-WP_001295347.1;Parent=gene-AB69_RS17430;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AB69_RS17430;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 131197 135657 . + . ID=gene-AB69_RS17425;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AB69_RS17425;old_locus_tag=AB69_0978 NZ_JHDO01000070.1 Protein Homology CDS 131197 135657 . + 0 ID=cds-WP_000572668.1;Parent=gene-AB69_RS17425;Dbxref=GenBank:WP_000572668.1;Name=WP_000572668.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AB69_RS17425;product=chromosome partition protein MukB;protein_id=WP_000572668.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 135918 137765 . + . ID=gene-AB69_RS17420;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AB69_RS17420;old_locus_tag=AB69_0979 NZ_JHDO01000070.1 Protein Homology CDS 135918 137765 . + 0 ID=cds-WP_000925972.1;Parent=gene-AB69_RS17420;Dbxref=GenBank:WP_000925972.1;Name=WP_000925972.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AB69_RS17420;product=L%2CD-transpeptidase;protein_id=WP_000925972.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 137946 138494 . + . ID=gene-AB69_RS17415;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AB69_RS17415;old_locus_tag=AB69_0980 NZ_JHDO01000070.1 Protein Homology CDS 137946 138494 . + 0 ID=cds-WP_001295932.1;Parent=gene-AB69_RS17415;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AB69_RS17415;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 138521 139168 . + . ID=gene-AB69_RS17410;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AB69_RS17410;old_locus_tag=AB69_0981 NZ_JHDO01000070.1 Protein Homology CDS 138521 139168 . + 0 ID=cds-WP_001109486.1;Parent=gene-AB69_RS17410;Dbxref=GenBank:WP_001109486.1;Name=WP_001109486.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AB69_RS17410;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109486.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 139390 140580 . - . ID=gene-AB69_RS17405;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AB69_RS17405;old_locus_tag=AB69_0982 NZ_JHDO01000070.1 Protein Homology CDS 139390 140580 . - 0 ID=cds-WP_000462687.1;Parent=gene-AB69_RS17405;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AB69_RS17405;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 140765 141853 . - . ID=gene-AB69_RS17400;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AB69_RS17400;old_locus_tag=AB69_0983 NZ_JHDO01000070.1 Protein Homology CDS 140765 141853 . - 0 ID=cds-WP_000977906.1;Parent=gene-AB69_RS17400;Dbxref=GenBank:WP_000977906.1;Name=WP_000977906.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AB69_RS17400;product=porin OmpF;protein_id=WP_000977906.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 142455 143855 . - . ID=gene-AB69_RS17395;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AB69_RS17395;old_locus_tag=AB69_0984 NZ_JHDO01000070.1 Protein Homology CDS 142455 143855 . - 0 ID=cds-WP_000117881.1;Parent=gene-AB69_RS17395;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AB69_RS17395;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 144024 145226 . - . ID=gene-AB69_RS17390;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AB69_RS17390;old_locus_tag=AB69_0985 NZ_JHDO01000070.1 Protein Homology CDS 144024 145226 . - 0 ID=cds-WP_001307697.1;Parent=gene-AB69_RS17390;Dbxref=GenBank:WP_001307697.1;Name=WP_001307697.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AB69_RS17390;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 145492 148104 . + . ID=gene-AB69_RS17385;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AB69_RS17385;old_locus_tag=AB69_0987 NZ_JHDO01000070.1 Protein Homology CDS 145492 148104 . + 0 ID=cds-WP_032230975.1;Parent=gene-AB69_RS17385;Dbxref=GenBank:WP_032230975.1;Name=WP_032230975.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AB69_RS17385;product=aminopeptidase N;protein_id=WP_032230975.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 148147 148914 . - . ID=gene-AB69_RS17380;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AB69_RS17380;old_locus_tag=AB69_0988 NZ_JHDO01000070.1 Protein Homology CDS 148147 148914 . - 0 ID=cds-WP_032230976.1;Parent=gene-AB69_RS17380;Dbxref=GenBank:WP_032230976.1;Name=WP_032230976.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AB69_RS17380;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_032230976.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 148911 149702 . - . ID=gene-AB69_RS17375;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AB69_RS17375;old_locus_tag=AB69_0989 NZ_JHDO01000070.1 Protein Homology CDS 148911 149702 . - 0 ID=cds-WP_000235203.1;Parent=gene-AB69_RS17375;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AB69_RS17375;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 149713 150858 . - . ID=gene-AB69_RS17370;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AB69_RS17370;old_locus_tag=AB69_0990 NZ_JHDO01000070.1 Protein Homology CDS 149713 150858 . - 0 ID=cds-WP_000056006.1;Parent=gene-AB69_RS17370;Dbxref=GenBank:WP_000056006.1;Name=WP_000056006.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AB69_RS17370;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000056006.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 150855 151814 . - . ID=gene-AB69_RS17365;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AB69_RS17365;old_locus_tag=AB69_0991 NZ_JHDO01000070.1 Protein Homology CDS 150855 151814 . - 0 ID=cds-WP_032230977.1;Parent=gene-AB69_RS17365;Dbxref=GenBank:WP_032230977.1;Name=WP_032230977.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AB69_RS17365;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_032230977.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 151807 152382 . - . ID=gene-AB69_RS17360;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AB69_RS17360;old_locus_tag=AB69_0992 NZ_JHDO01000070.1 Protein Homology CDS 151807 152382 . - 0 ID=cds-WP_032230979.1;Parent=gene-AB69_RS17360;Dbxref=GenBank:WP_032230979.1;Name=WP_032230979.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AB69_RS17360;product=NADPH-dependent FMN reductase;protein_id=WP_032230979.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 152738 153277 . + . ID=gene-AB69_RS17355;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AB69_RS17355;old_locus_tag=AB69_0993 NZ_JHDO01000070.1 Protein Homology CDS 152738 153277 . + 0 ID=cds-WP_000750293.1;Parent=gene-AB69_RS17355;Dbxref=GenBank:WP_000750293.1;Name=WP_000750293.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AB69_RS17355;product=fimbrial protein;protein_id=WP_000750293.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 153360 154061 . + . ID=gene-AB69_RS17350;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AB69_RS17350;old_locus_tag=AB69_0994 NZ_JHDO01000070.1 Protein Homology CDS 153360 154061 . + 0 ID=cds-WP_001295349.1;Parent=gene-AB69_RS17350;Dbxref=GenBank:WP_001295349.1;Name=WP_001295349.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AB69_RS17350;product=fimbrial biogenesis chaperone;protein_id=WP_001295349.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 154086 156686 . + . ID=gene-AB69_RS17345;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AB69_RS17345;old_locus_tag=AB69_0995 NZ_JHDO01000070.1 Protein Homology CDS 154086 156686 . + 0 ID=cds-WP_000286312.1;Parent=gene-AB69_RS17345;Dbxref=GenBank:WP_000286312.1;Name=WP_000286312.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AB69_RS17345;product=fimbrial biogenesis usher protein;protein_id=WP_000286312.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 156677 157747 . + . ID=gene-AB69_RS17340;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AB69_RS17340;old_locus_tag=AB69_0996 NZ_JHDO01000070.1 Protein Homology CDS 156677 157747 . + 0 ID=cds-WP_001165668.1;Parent=gene-AB69_RS17340;Dbxref=GenBank:WP_001165668.1;Name=WP_001165668.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AB69_RS17340;product=fimbrial protein;protein_id=WP_001165668.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 157759 158301 . + . ID=gene-AB69_RS17335;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AB69_RS17335;old_locus_tag=AB69_0997 NZ_JHDO01000070.1 Protein Homology CDS 157759 158301 . + 0 ID=cds-WP_000730614.1;Parent=gene-AB69_RS17335;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AB69_RS17335;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 158309 158824 . + . ID=gene-AB69_RS17330;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AB69_RS17330;old_locus_tag=AB69_0998 NZ_JHDO01000070.1 Protein Homology CDS 158309 158824 . + 0 ID=cds-WP_000919497.1;Parent=gene-AB69_RS17330;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AB69_RS17330;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 158790 159527 . + . ID=gene-AB69_RS17325;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AB69_RS17325;old_locus_tag=AB69_0999 NZ_JHDO01000070.1 Protein Homology CDS 158790 159527 . + 0 ID=cds-WP_001111465.1;Parent=gene-AB69_RS17325;Dbxref=GenBank:WP_001111465.1;Name=WP_001111465.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AB69_RS17325;product=fimbrial chaperone;protein_id=WP_001111465.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 159638 160648 . + . ID=gene-AB69_RS17320;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AB69_RS17320;old_locus_tag=AB69_1000 NZ_JHDO01000070.1 Protein Homology CDS 159638 160648 . + 0 ID=cds-WP_001295352.1;Parent=gene-AB69_RS17320;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AB69_RS17320;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 160822 161364 . + . ID=gene-AB69_RS17315;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AB69_RS17315;old_locus_tag=AB69_1001 NZ_JHDO01000070.1 Protein Homology CDS 160822 161364 . + 0 ID=cds-WP_001295353.1;Parent=gene-AB69_RS17315;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AB69_RS17315;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 161361 162470 . - . ID=gene-AB69_RS17310;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AB69_RS17310;old_locus_tag=AB69_1002 NZ_JHDO01000070.1 Protein Homology CDS 161361 162470 . - 0 ID=cds-WP_000212426.1;Parent=gene-AB69_RS17310;Dbxref=GenBank:WP_000212426.1;Name=WP_000212426.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AB69_RS17310;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_000212426.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 162714 164822 . + . ID=gene-AB69_RS17305;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AB69_RS17305;old_locus_tag=AB69_1003 NZ_JHDO01000070.1 Protein Homology CDS 162714 164822 . + 0 ID=cds-WP_001086539.1;Parent=gene-AB69_RS17305;Dbxref=GenBank:WP_001086539.1;Name=WP_001086539.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415468.1;locus_tag=AB69_RS17305;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086539.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 164834 166741 . + . ID=gene-AB69_RS17300;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AB69_RS17300;old_locus_tag=AB69_1004 NZ_JHDO01000070.1 Protein Homology CDS 164834 166741 . + 0 ID=cds-WP_000053099.1;Parent=gene-AB69_RS17300;Dbxref=GenBank:WP_000053099.1;Name=WP_000053099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AB69_RS17300;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 166871 168124 . + . ID=gene-AB69_RS17295;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AB69_RS17295;old_locus_tag=AB69_1005 NZ_JHDO01000070.1 Protein Homology CDS 166871 168124 . + 0 ID=cds-WP_000333176.1;Parent=gene-AB69_RS17295;Dbxref=GenBank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AB69_RS17295;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 168129 169769 . + . ID=gene-AB69_RS17290;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AB69_RS17290;old_locus_tag=AB69_1006 NZ_JHDO01000070.1 Protein Homology CDS 168129 169769 . + 0 ID=cds-WP_000445533.1;Parent=gene-AB69_RS17290;Dbxref=GenBank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AB69_RS17290;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 169766 170329 . + . ID=gene-AB69_RS17285;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AB69_RS17285;old_locus_tag=AB69_1007 NZ_JHDO01000070.1 Protein Homology CDS 169766 170329 . + 0 ID=cds-WP_000759120.1;Parent=gene-AB69_RS17285;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AB69_RS17285;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 170585 170752 . + . ID=gene-AB69_RS0123765;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AB69_RS0123765 NZ_JHDO01000070.1 Protein Homology CDS 170585 170752 . + 0 ID=cds-WP_000828648.1;Parent=gene-AB69_RS0123765;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AB69_RS0123765;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 170822 171340 . - . ID=gene-AB69_RS17280;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AB69_RS17280;old_locus_tag=AB69_1008 NZ_JHDO01000070.1 Protein Homology CDS 170822 171340 . - 0 ID=cds-WP_000227927.1;Parent=gene-AB69_RS17280;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AB69_RS17280;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 171409 173169 . - . ID=gene-AB69_RS17275;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AB69_RS17275;old_locus_tag=AB69_1009 NZ_JHDO01000070.1 Protein Homology CDS 171409 173169 . - 0 ID=cds-WP_000156518.1;Parent=gene-AB69_RS17275;Dbxref=GenBank:WP_000156518.1;Name=WP_000156518.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AB69_RS17275;product=AAA family ATPase;protein_id=WP_000156518.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 173355 173807 . + . ID=gene-AB69_RS17270;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AB69_RS17270;old_locus_tag=AB69_1010 NZ_JHDO01000070.1 Protein Homology CDS 173355 173807 . + 0 ID=cds-WP_000877161.1;Parent=gene-AB69_RS17270;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AB69_RS17270;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 173883 174923 . - . ID=gene-AB69_RS17265;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AB69_RS17265;old_locus_tag=AB69_1011 NZ_JHDO01000070.1 Protein Homology CDS 173883 174923 . - 0 ID=cds-WP_000750416.1;Parent=gene-AB69_RS17265;Dbxref=GenBank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AB69_RS17265;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 175280 175789 . - . ID=gene-AB69_RS17260;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AB69_RS17260;old_locus_tag=AB69_1012 NZ_JHDO01000070.1 Protein Homology CDS 175280 175789 . - 0 ID=cds-WP_000288710.1;Parent=gene-AB69_RS17260;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AB69_RS17260;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 176008 176637 . + . ID=gene-AB69_RS17255;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AB69_RS17255;old_locus_tag=AB69_1013 NZ_JHDO01000070.1 Protein Homology CDS 176008 176637 . + 0 ID=cds-WP_000839153.1;Parent=gene-AB69_RS17255;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AB69_RS17255;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 176600 178762 . - . ID=gene-AB69_RS17250;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AB69_RS17250;old_locus_tag=AB69_1014 NZ_JHDO01000070.1 Protein Homology CDS 176600 178762 . - 0 ID=cds-WP_000875061.1;Parent=gene-AB69_RS17250;Dbxref=GenBank:WP_000875061.1;Name=WP_000875061.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AB69_RS17250;product=YccS family putative transporter;protein_id=WP_000875061.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 178772 179218 . - . ID=gene-AB69_RS17245;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AB69_RS17245;old_locus_tag=AB69_1015 NZ_JHDO01000070.1 Protein Homology CDS 178772 179218 . - 0 ID=cds-WP_001261235.1;Parent=gene-AB69_RS17245;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AB69_RS17245;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 179341 181395 . + . ID=gene-AB69_RS17240;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AB69_RS17240;old_locus_tag=AB69_1016 NZ_JHDO01000070.1 Protein Homology CDS 179341 181395 . + 0 ID=cds-WP_001295354.1;Parent=gene-AB69_RS17240;Dbxref=GenBank:WP_001295354.1;Name=WP_001295354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AB69_RS17240;product=DNA helicase IV;protein_id=WP_001295354.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 181427 181885 . - . ID=gene-AB69_RS17235;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AB69_RS17235;old_locus_tag=AB69_1017 NZ_JHDO01000070.1 Protein Homology CDS 181427 181885 . - 0 ID=cds-WP_000424181.1;Parent=gene-AB69_RS17235;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AB69_RS17235;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 181981 182643 . - . ID=gene-AB69_RS17230;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AB69_RS17230;old_locus_tag=AB69_1018 NZ_JHDO01000070.1 Protein Homology CDS 181981 182643 . - 0 ID=cds-WP_000847791.1;Parent=gene-AB69_RS17230;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AB69_RS17230;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 182816 183229 . + . ID=gene-AB69_RS17220;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AB69_RS17220;old_locus_tag=AB69_1020 NZ_JHDO01000070.1 Protein Homology CDS 182816 183229 . + 0 ID=cds-WP_001301418.1;Parent=gene-AB69_RS17220;Dbxref=GenBank:WP_001301418.1;Name=WP_001301418.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415485.4;locus_tag=AB69_RS17220;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 183274 183591 . - . ID=gene-AB69_RS17215;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AB69_RS17215;old_locus_tag=AB69_1021 NZ_JHDO01000070.1 Protein Homology CDS 183274 183591 . - 0 ID=cds-WP_001295356.1;Parent=gene-AB69_RS17215;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AB69_RS17215;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 183649 184839 . - . ID=gene-AB69_RS17210;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AB69_RS17210;old_locus_tag=AB69_1022 NZ_JHDO01000070.1 Protein Homology CDS 183649 184839 . - 0 ID=cds-WP_000116297.1;Parent=gene-AB69_RS17210;Dbxref=GenBank:WP_000116297.1;Name=WP_000116297.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AB69_RS17210;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116297.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 184934 185212 . + . ID=gene-AB69_RS17205;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AB69_RS17205;old_locus_tag=AB69_1023 NZ_JHDO01000070.1 Protein Homology CDS 184934 185212 . + 0 ID=cds-WP_001485659.1;Parent=gene-AB69_RS17205;Dbxref=GenBank:WP_001485659.1;Name=WP_001485659.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AB69_RS17205;product=acylphosphatase;protein_id=WP_001485659.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 185209 185538 . - . ID=gene-AB69_RS17200;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AB69_RS17200;old_locus_tag=AB69_1024 NZ_JHDO01000070.1 Protein Homology CDS 185209 185538 . - 0 ID=cds-WP_000904442.1;Parent=gene-AB69_RS17200;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AB69_RS17200;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 185629 186288 . - . ID=gene-AB69_RS17195;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AB69_RS17195;old_locus_tag=AB69_1025 NZ_JHDO01000070.1 Protein Homology CDS 185629 186288 . - 0 ID=cds-WP_000375136.1;Parent=gene-AB69_RS17195;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AB69_RS17195;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 186495 186582 . - . ID=gene-AB69_RS17190;Name=AB69_RS17190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS17190;old_locus_tag=AB69_1026 NZ_JHDO01000070.1 tRNAscan-SE tRNA 186495 186582 . - . ID=rna-AB69_RS17190;Parent=gene-AB69_RS17190;anticodon=(pos:complement(186546..186548));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS17190;product=tRNA-Ser NZ_JHDO01000070.1 tRNAscan-SE exon 186495 186582 . - . ID=exon-AB69_RS17190-1;Parent=rna-AB69_RS17190;anticodon=(pos:complement(186546..186548));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS17190;product=tRNA-Ser NZ_JHDO01000070.1 RefSeq gene 187009 188127 . + . ID=gene-AB69_RS17185;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AB69_RS17185;old_locus_tag=AB69_1027 NZ_JHDO01000070.1 Protein Homology CDS 187009 188127 . + 0 ID=cds-WP_001058323.1;Parent=gene-AB69_RS17185;Dbxref=GenBank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AB69_RS17185;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 188124 189917 . + . ID=gene-AB69_RS17180;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AB69_RS17180;old_locus_tag=AB69_1028 NZ_JHDO01000070.1 Protein Homology CDS 188124 189917 . + 0 ID=cds-WP_000107384.1;Parent=gene-AB69_RS17180;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AB69_RS17180;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 189936 190643 . + . ID=gene-AB69_RS17175;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AB69_RS17175;old_locus_tag=AB69_1029 NZ_JHDO01000070.1 Protein Homology CDS 189936 190643 . + 0 ID=cds-WP_001186424.1;Parent=gene-AB69_RS17175;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AB69_RS17175;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 190640 191227 . + . ID=gene-AB69_RS17170;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AB69_RS17170;old_locus_tag=AB69_1030 NZ_JHDO01000070.1 Protein Homology CDS 190640 191227 . + 0 ID=cds-WP_000003671.1;Parent=gene-AB69_RS17170;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AB69_RS17170;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 191224 191622 . + . ID=gene-AB69_RS17165;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AB69_RS17165;old_locus_tag=AB69_1031 NZ_JHDO01000070.1 Protein Homology CDS 191224 191622 . + 0 ID=cds-WP_000063978.1;Parent=gene-AB69_RS17165;Dbxref=GenBank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AB69_RS17165;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 191619 192476 . + . ID=gene-AB69_RS17160;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AB69_RS17160;old_locus_tag=AB69_1032 NZ_JHDO01000070.1 Protein Homology CDS 191619 192476 . + 0 ID=cds-WP_000004899.1;Parent=gene-AB69_RS17160;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AB69_RS17160;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 192610 194154 . + . ID=gene-AB69_RS17155;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AB69_RS17155;old_locus_tag=AB69_1033 NZ_JHDO01000070.1 Protein Homology CDS 192610 194154 . + 0 ID=cds-WP_000263577.1;Parent=gene-AB69_RS17155;Dbxref=GenBank:WP_000263577.1;Name=WP_000263577.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AB69_RS17155;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263577.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 194166 195302 . + . ID=gene-AB69_RS17150;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AB69_RS17150;old_locus_tag=AB69_1034 NZ_JHDO01000070.1 Protein Homology CDS 194166 195302 . + 0 ID=cds-WP_000460803.1;Parent=gene-AB69_RS17150;Dbxref=GenBank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AB69_RS17150;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460803.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 195315 195407 . + . ID=gene-AB69_RS0123775;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AB69_RS0123775 NZ_JHDO01000070.1 Protein Homology CDS 195315 195407 . + 0 ID=cds-WP_000270305.1;Parent=gene-AB69_RS0123775;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AB69_RS0123775;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 195487 196785 . + . ID=gene-AB69_RS17145;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AB69_RS17145;old_locus_tag=AB69_1035 NZ_JHDO01000070.1 Protein Homology CDS 195487 196785 . + 0 ID=cds-WP_001300464.1;Parent=gene-AB69_RS17145;Dbxref=GenBank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AB69_RS17145;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 196900 199080 . - . ID=gene-AB69_RS17140;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AB69_RS17140;old_locus_tag=AB69_1036 NZ_JHDO01000070.1 Protein Homology CDS 196900 199080 . - 0 ID=cds-WP_000208650.1;Parent=gene-AB69_RS17140;Dbxref=GenBank:WP_000208650.1;Name=WP_000208650.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=AB69_RS17140;product=tyrosine-protein kinase;protein_id=WP_000208650.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 199100 199546 . - . ID=gene-AB69_RS17135;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AB69_RS17135;old_locus_tag=AB69_1037 NZ_JHDO01000070.1 Protein Homology CDS 199100 199546 . - 0 ID=cds-WP_000057871.1;Parent=gene-AB69_RS17135;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AB69_RS17135;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 199534 200673 . - . ID=gene-AB69_RS17130;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AB69_RS17130;old_locus_tag=AB69_1038 NZ_JHDO01000070.1 Protein Homology CDS 199534 200673 . - 0 ID=cds-WP_001295357.1;Parent=gene-AB69_RS17130;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AB69_RS17130;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 200719 202815 . - . ID=gene-AB69_RS17125;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AB69_RS17125;old_locus_tag=AB69_1039 NZ_JHDO01000070.1 Protein Homology CDS 200719 202815 . - 0 ID=cds-WP_000742328.1;Parent=gene-AB69_RS17125;Dbxref=GenBank:WP_000742328.1;Name=WP_000742328.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415504.1;locus_tag=AB69_RS17125;product=YjbH domain-containing protein;protein_id=WP_000742328.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 202815 203561 . - . ID=gene-AB69_RS17120;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AB69_RS17120;old_locus_tag=AB69_1040 NZ_JHDO01000070.1 Protein Homology CDS 202815 203561 . - 0 ID=cds-WP_001038079.1;Parent=gene-AB69_RS17120;Dbxref=GenBank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AB69_RS17120;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 203558 204202 . - . ID=gene-AB69_RS17115;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AB69_RS17115;old_locus_tag=AB69_1041 NZ_JHDO01000070.1 Protein Homology CDS 203558 204202 . - 0 ID=cds-WP_001247610.1;Parent=gene-AB69_RS17115;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AB69_RS17115;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 204309 204614 . - . ID=gene-AB69_RS17110;Name=gfcA;gbkey=Gene;gene=gfcA;gene_biotype=protein_coding;locus_tag=AB69_RS17110;old_locus_tag=AB69_1042 NZ_JHDO01000070.1 Protein Homology CDS 204309 204614 . - 0 ID=cds-WP_001295358.1;Parent=gene-AB69_RS17110;Dbxref=GenBank:WP_001295358.1;Name=WP_001295358.1;gbkey=CDS;gene=gfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415507.2;locus_tag=AB69_RS17110;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001295358.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 205056 205268 . - . ID=gene-AB69_RS17105;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AB69_RS17105;old_locus_tag=AB69_1043 NZ_JHDO01000070.1 Protein Homology CDS 205056 205268 . - 0 ID=cds-WP_000087763.1;Parent=gene-AB69_RS17105;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AB69_RS17105;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 205554 205766 . + . ID=gene-AB69_RS17100;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AB69_RS17100;old_locus_tag=AB69_1044 NZ_JHDO01000070.1 Protein Homology CDS 205554 205766 . + 0 ID=cds-WP_000066490.1;Parent=gene-AB69_RS17100;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AB69_RS17100;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 205777 205965 . + . ID=gene-AB69_RS26635;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AB69_RS26635 NZ_JHDO01000070.1 Protein Homology CDS 205777 205965 . + 0 ID=cds-WP_071524879.1;Parent=gene-AB69_RS26635;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AB69_RS26635;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 205940 206170 . + . ID=gene-AB69_RS0123780;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AB69_RS0123780 NZ_JHDO01000070.1 Protein Homology CDS 205940 206170 . + 0 ID=cds-WP_001309400.1;Parent=gene-AB69_RS0123780;Dbxref=GenBank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AB69_RS0123780;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 206160 206333 . + . ID=gene-AB69_RS17095;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AB69_RS17095;old_locus_tag=AB69_1046 NZ_JHDO01000070.1 Protein Homology CDS 206160 206333 . + 0 ID=cds-WP_001019197.1;Parent=gene-AB69_RS17095;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AB69_RS17095;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 206382 207455 . - . ID=gene-AB69_RS17090;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AB69_RS17090;old_locus_tag=AB69_1047 NZ_JHDO01000070.1 Protein Homology CDS 206382 207455 . - 0 ID=cds-WP_000818477.1;Parent=gene-AB69_RS17090;Dbxref=GenBank:WP_000818477.1;Name=WP_000818477.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AB69_RS17090;product=4Fe-4S binding protein;protein_id=WP_000818477.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 207527 210271 . - . ID=gene-AB69_RS17085;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AB69_RS17085;old_locus_tag=AB69_1048 NZ_JHDO01000070.1 Protein Homology CDS 207527 210271 . - 0 ID=cds-WP_071996069.1;Parent=gene-AB69_RS17085;Dbxref=GenBank:WP_071996069.1;Name=WP_071996069.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AB69_RS17085;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071996069.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 210354 211382 . + . ID=gene-AB69_RS17080;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AB69_RS17080;old_locus_tag=AB69_1049 NZ_JHDO01000070.1 Protein Homology CDS 210354 211382 . + 0 ID=cds-WP_001264933.1;Parent=gene-AB69_RS17080;Dbxref=GenBank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AB69_RS17080;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 211355 212047 . - . ID=gene-AB69_RS17075;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AB69_RS17075;old_locus_tag=AB69_1050 NZ_JHDO01000070.1 Protein Homology CDS 211355 212047 . - 0 ID=cds-WP_001120125.1;Parent=gene-AB69_RS17075;Dbxref=GenBank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415515.1;locus_tag=AB69_RS17075;product=two-component system response regulator TorR;protein_id=WP_001120125.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 212177 213349 . + . ID=gene-AB69_RS17070;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AB69_RS17070;old_locus_tag=AB69_1051 NZ_JHDO01000070.1 Protein Homology CDS 212177 213349 . + 0 ID=cds-WP_001230242.1;Parent=gene-AB69_RS17070;Dbxref=GenBank:WP_001230242.1;Name=WP_001230242.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AB69_RS17070;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230242.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 213349 215895 . + . ID=gene-AB69_RS17065;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AB69_RS17065;old_locus_tag=AB69_1052 NZ_JHDO01000070.1 Protein Homology CDS 213349 215895 . + 0 ID=cds-WP_001062091.1;Parent=gene-AB69_RS17065;Dbxref=GenBank:WP_001062091.1;Name=WP_001062091.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AB69_RS17065;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001062091.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 215892 216491 . + . ID=gene-AB69_RS17060;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AB69_RS17060;old_locus_tag=AB69_1053 NZ_JHDO01000070.1 Protein Homology CDS 215892 216491 . + 0 ID=cds-WP_000209894.1;Parent=gene-AB69_RS17060;Dbxref=GenBank:WP_000209894.1;Name=WP_000209894.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AB69_RS17060;product=molecular chaperone TorD;protein_id=WP_000209894.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 216643 216948 . - . ID=gene-AB69_RS17055;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AB69_RS17055;old_locus_tag=AB69_1054 NZ_JHDO01000070.1 Protein Homology CDS 216643 216948 . - 0 ID=cds-WP_000024560.1;Parent=gene-AB69_RS17055;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AB69_RS17055;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 216948 217868 . - . ID=gene-AB69_RS17050;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AB69_RS17050;old_locus_tag=AB69_1055 NZ_JHDO01000070.1 Protein Homology CDS 216948 217868 . - 0 ID=cds-WP_000420621.1;Parent=gene-AB69_RS17050;Dbxref=GenBank:WP_000420621.1;Name=WP_000420621.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AB69_RS17050;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_JHDO01000070.1 RefSeq gene 218155 218852 . - . ID=gene-AB69_RS17045;Name=AB69_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS17045;old_locus_tag=AB69_1056 NZ_JHDO01000070.1 Protein Homology CDS 218603 218852 . - 0 ID=cds-WP_094096600.1-3;Parent=gene-AB69_RS17045;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS17045;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000070.1 Protein Homology CDS 218155 218603 . - 2 ID=cds-WP_094096600.1-3;Parent=gene-AB69_RS17045;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS17045;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JHDO01000071.1 1 32046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000071.1 RefSeq region 1 32046 . + . ID=NZ_JHDO01000071.1:1..32046;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000071.1 RefSeq pseudogene 1 553 . - . ID=gene-AB69_RS28465;Name=AB69_RS28465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28465;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000071.1 Protein Homology CDS 1 553 . - 0 ID=cds-AB69_RS28465;Parent=gene-AB69_RS28465;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28465;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 595 1863 . + . ID=gene-AB69_RS0123785;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=protein_coding;locus_tag=AB69_RS0123785 NZ_JHDO01000071.1 Protein Homology CDS 595 1863 . + 0 ID=cds-WP_032230986.1;Parent=gene-AB69_RS0123785;Dbxref=GenBank:WP_032230986.1;Name=WP_032230986.1;gbkey=CDS;gene=yccE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AB69_RS0123785;product=YccE family protein;protein_id=WP_032230986.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 2156 3397 . + . ID=gene-AB69_RS17035;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AB69_RS17035;old_locus_tag=AB69_1059 NZ_JHDO01000071.1 Protein Homology CDS 2156 3397 . + 0 ID=cds-WP_001044279.1;Parent=gene-AB69_RS17035;Dbxref=GenBank:WP_001044279.1;Name=WP_001044279.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AB69_RS17035;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044279.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 3435 3662 . - . ID=gene-AB69_RS17030;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AB69_RS17030;old_locus_tag=AB69_1060 NZ_JHDO01000071.1 Protein Homology CDS 3435 3662 . - 0 ID=cds-WP_001143120.1;Parent=gene-AB69_RS17030;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AB69_RS17030;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 3683 4279 . - . ID=gene-AB69_RS17025;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AB69_RS17025;old_locus_tag=AB69_1061 NZ_JHDO01000071.1 Protein Homology CDS 3683 4279 . - 0 ID=cds-WP_001151437.1;Parent=gene-AB69_RS17025;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AB69_RS17025;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 4652 4825 . + . ID=gene-AB69_RS0123795;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AB69_RS0123795 NZ_JHDO01000071.1 Protein Homology CDS 4652 4825 . + 0 ID=cds-WP_001273658.1;Parent=gene-AB69_RS0123795;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AB69_RS0123795;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 5082 6410 . - . ID=gene-AB69_RS17020;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AB69_RS17020;old_locus_tag=AB69_1063 NZ_JHDO01000071.1 Protein Homology CDS 5082 6410 . - 0 ID=cds-WP_001326838.1;Parent=gene-AB69_RS17020;Dbxref=GenBank:WP_001326838.1;Name=WP_001326838.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AB69_RS17020;product=pyrimidine utilization transport protein G;protein_id=WP_001326838.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 6431 6925 . - . ID=gene-AB69_RS17015;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AB69_RS17015;old_locus_tag=AB69_1064 NZ_JHDO01000071.1 Protein Homology CDS 6431 6925 . - 0 ID=cds-WP_001028083.1;Parent=gene-AB69_RS17015;Dbxref=GenBank:WP_001028083.1;Name=WP_001028083.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415527.4;locus_tag=AB69_RS17015;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028083.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 6936 7526 . - . ID=gene-AB69_RS17010;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AB69_RS17010;old_locus_tag=AB69_1065 NZ_JHDO01000071.1 Protein Homology CDS 6936 7526 . - 0 ID=cds-WP_001001176.1;Parent=gene-AB69_RS17010;Dbxref=GenBank:WP_001001176.1;Name=WP_001001176.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415528.1;locus_tag=AB69_RS17010;product=malonic semialdehyde reductase;protein_id=WP_001001176.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 7536 8336 . - . ID=gene-AB69_RS17005;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AB69_RS17005;old_locus_tag=AB69_1066 NZ_JHDO01000071.1 Protein Homology CDS 7536 8336 . - 0 ID=cds-WP_000777653.1;Parent=gene-AB69_RS17005;Dbxref=GenBank:WP_000777653.1;Name=WP_000777653.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415529.1;locus_tag=AB69_RS17005;product=pyrimidine utilization protein D;protein_id=WP_000777653.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 8344 8730 . - . ID=gene-AB69_RS17000;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AB69_RS17000;old_locus_tag=AB69_1067 NZ_JHDO01000071.1 Protein Homology CDS 8344 8730 . - 0 ID=cds-WP_001126780.1;Parent=gene-AB69_RS17000;Dbxref=GenBank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AB69_RS17000;product=3-aminoacrylate deaminase;protein_id=WP_001126780.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 8742 9434 . - . ID=gene-AB69_RS16995;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AB69_RS16995;old_locus_tag=AB69_1068 NZ_JHDO01000071.1 Protein Homology CDS 8742 9434 . - 0 ID=cds-WP_001393558.1;Parent=gene-AB69_RS16995;Dbxref=GenBank:WP_001393558.1;Name=WP_001393558.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AB69_RS16995;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001393558.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 9434 10525 . - . ID=gene-AB69_RS16990;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AB69_RS16990;old_locus_tag=AB69_1069 NZ_JHDO01000071.1 Protein Homology CDS 9434 10525 . - 0 ID=cds-WP_001340618.1;Parent=gene-AB69_RS16990;Dbxref=GenBank:WP_001340618.1;Name=WP_001340618.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AB69_RS16990;product=pyrimidine utilization protein A;protein_id=WP_001340618.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 10813 11451 . + . ID=gene-AB69_RS16985;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AB69_RS16985;old_locus_tag=AB69_1070 NZ_JHDO01000071.1 Protein Homology CDS 10813 11451 . + 0 ID=cds-WP_000191701.1;Parent=gene-AB69_RS16985;Dbxref=GenBank:WP_000191701.1;Name=WP_000191701.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AB69_RS16985;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191701.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 11491 15453 . - . ID=gene-AB69_RS16980;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AB69_RS16980;old_locus_tag=AB69_1071 NZ_JHDO01000071.1 Protein Homology CDS 11491 15453 . - 0 ID=cds-WP_032230987.1;Parent=gene-AB69_RS16980;Dbxref=GenBank:WP_032230987.1;Name=WP_032230987.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415534.1;locus_tag=AB69_RS16980;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_032230987.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 15508 15717 . + . ID=gene-AB69_RS0123800;Name=AB69_RS0123800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123800;old_locus_tag=AB69_1072 NZ_JHDO01000071.1 GeneMarkS-2+ CDS 15508 15717 . + 0 ID=cds-WP_000979516.1;Parent=gene-AB69_RS0123800;Dbxref=GenBank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS0123800;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 15876 17384 . + . ID=gene-AB69_RS16975;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AB69_RS16975;old_locus_tag=AB69_1074 NZ_JHDO01000071.1 Protein Homology CDS 15876 17384 . + 0 ID=cds-WP_001018479.1;Parent=gene-AB69_RS16975;Dbxref=GenBank:WP_001018479.1;Name=WP_001018479.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AB69_RS16975;product=sodium/proline symporter PutP;protein_id=WP_001018479.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 17589 17891 . - . ID=gene-AB69_RS29245;Name=AB69_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29245 NZ_JHDO01000071.1 GeneMarkS-2+ CDS 17589 17891 . - 0 ID=cds-WP_032230988.1;Parent=gene-AB69_RS29245;Dbxref=GenBank:WP_032230988.1;Name=WP_032230988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29245;product=hypothetical protein;protein_id=WP_032230988.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 17927 18757 . + . ID=gene-AB69_RS16970;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AB69_RS16970;old_locus_tag=AB69_1075 NZ_JHDO01000071.1 Protein Homology CDS 17927 18757 . + 0 ID=cds-WP_000497942.1;Parent=gene-AB69_RS16970;Dbxref=GenBank:WP_000497942.1;Name=WP_000497942.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AB69_RS16970;product=iron uptake transporter permease EfeU;protein_id=WP_000497942.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 18815 19942 . + . ID=gene-AB69_RS16965;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AB69_RS16965;old_locus_tag=AB69_1076 NZ_JHDO01000071.1 Protein Homology CDS 18815 19942 . + 0 ID=cds-WP_000154398.1;Parent=gene-AB69_RS16965;Dbxref=GenBank:WP_000154398.1;Name=WP_000154398.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415537.1;locus_tag=AB69_RS16965;product=iron uptake system protein EfeO;protein_id=WP_000154398.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 19948 21219 . + . ID=gene-AB69_RS16960;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AB69_RS16960;old_locus_tag=AB69_1077 NZ_JHDO01000071.1 Protein Homology CDS 19948 21219 . + 0 ID=cds-WP_032235682.1;Parent=gene-AB69_RS16960;Dbxref=GenBank:WP_032235682.1;Name=WP_032235682.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AB69_RS16960;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_032235682.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 21840 22628 . + . ID=gene-AB69_RS16955;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AB69_RS16955;old_locus_tag=AB69_1078 NZ_JHDO01000071.1 Protein Homology CDS 21840 22628 . + 0 ID=cds-WP_000533522.1;Parent=gene-AB69_RS16955;Dbxref=GenBank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AB69_RS16955;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 22678 23091 . - . ID=gene-AB69_RS16950;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AB69_RS16950;old_locus_tag=AB69_1079 NZ_JHDO01000071.1 Protein Homology CDS 22678 23091 . - 0 ID=cds-WP_001061095.1;Parent=gene-AB69_RS16950;Dbxref=GenBank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AB69_RS16950;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 23093 24418 . - . ID=gene-AB69_RS16945;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AB69_RS16945;old_locus_tag=AB69_1080 NZ_JHDO01000071.1 Protein Homology CDS 23093 24418 . - 0 ID=cds-WP_000610451.1;Parent=gene-AB69_RS16945;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AB69_RS16945;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 24411 26429 . - . ID=gene-AB69_RS16940;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AB69_RS16940;old_locus_tag=AB69_1081 NZ_JHDO01000071.1 Protein Homology CDS 24411 26429 . - 0 ID=cds-WP_000945561.1;Parent=gene-AB69_RS16940;Dbxref=GenBank:WP_000945561.1;Name=WP_000945561.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AB69_RS16940;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_000945561.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 26438 28861 . - . ID=gene-AB69_RS16935;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=AB69_RS16935;old_locus_tag=AB69_1082 NZ_JHDO01000071.1 Protein Homology CDS 26438 28861 . - 0 ID=cds-WP_032230991.1;Parent=gene-AB69_RS16935;Dbxref=GenBank:WP_032230991.1;Name=WP_032230991.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AB69_RS16935;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_032230991.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 29448 30806 . + . ID=gene-AB69_RS16930;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=AB69_RS16930;old_locus_tag=AB69_1083 NZ_JHDO01000071.1 Protein Homology CDS 29448 30806 . + 0 ID=cds-WP_000409873.1;Parent=gene-AB69_RS16930;Dbxref=GenBank:WP_000409873.1;Name=WP_000409873.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcT;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415544.1;locus_tag=AB69_RS16930;product=GGDEF domain-containing protein;protein_id=WP_000409873.1;transl_table=11 NZ_JHDO01000071.1 RefSeq gene 30847 32009 . - . ID=gene-AB69_RS16925;Name=AB69_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16925;old_locus_tag=AB69_1084 NZ_JHDO01000071.1 Protein Homology CDS 31748 32009 . - 0 ID=cds-WP_088556163.1;Parent=gene-AB69_RS16925;Dbxref=GenBank:WP_088556163.1;Name=WP_088556163.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16925;product=IS3-like element IS3 family transposase;protein_id=WP_088556163.1;transl_table=11 NZ_JHDO01000071.1 Protein Homology CDS 30847 31748 . - 2 ID=cds-WP_088556163.1;Parent=gene-AB69_RS16925;Dbxref=GenBank:WP_088556163.1;Name=WP_088556163.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16925;product=IS3-like element IS3 family transposase;protein_id=WP_088556163.1;transl_table=11 ##sequence-region NZ_JHDO01000072.1 1 91568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000072.1 RefSeq region 1 91568 . + . ID=NZ_JHDO01000072.1:1..91568;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000072.1 RefSeq gene 31 1193 . - . ID=gene-AB69_RS16915;Name=AB69_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16915;old_locus_tag=AB69_1086 NZ_JHDO01000072.1 Protein Homology CDS 932 1193 . - 0 ID=cds-WP_113706132.1-3;Parent=gene-AB69_RS16915;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16915;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000072.1 Protein Homology CDS 31 932 . - 2 ID=cds-WP_113706132.1-3;Parent=gene-AB69_RS16915;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16915;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000072.1 RefSeq pseudogene 1246 1602 . + . ID=gene-AB69_RS16905;Name=AB69_RS16905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS16905;old_locus_tag=AB69_1088;partial=true;pseudo=true;start_range=.,1246 NZ_JHDO01000072.1 Protein Homology CDS 1246 1602 . + 0 ID=cds-AB69_RS16905;Parent=gene-AB69_RS16905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AB69_RS16905;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,1246;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 1599 2585 . + . ID=gene-AB69_RS16900;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AB69_RS16900;old_locus_tag=AB69_1089 NZ_JHDO01000072.1 Protein Homology CDS 1599 2585 . + 0 ID=cds-WP_000611859.1;Parent=gene-AB69_RS16900;Dbxref=GenBank:WP_000611859.1;Name=WP_000611859.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AB69_RS16900;product=protein YcdU;protein_id=WP_000611859.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 2959 3095 . - . ID=gene-AB69_RS25750;Name=AB69_RS25750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25750 NZ_JHDO01000072.1 cmsearch ncRNA 2959 3095 . - . ID=rna-AB69_RS25750;Parent=gene-AB69_RS25750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25750;product=RtT sRNA NZ_JHDO01000072.1 cmsearch exon 2959 3095 . - . ID=exon-AB69_RS25750-1;Parent=rna-AB69_RS25750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25750;product=RtT sRNA NZ_JHDO01000072.1 RefSeq gene 3140 3227 . - . ID=gene-AB69_RS16895;Name=AB69_RS16895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS16895;old_locus_tag=AB69_1090 NZ_JHDO01000072.1 tRNAscan-SE tRNA 3140 3227 . - . ID=rna-AB69_RS16895;Parent=gene-AB69_RS16895;anticodon=(pos:complement(3191..3193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS16895;product=tRNA-Ser NZ_JHDO01000072.1 tRNAscan-SE exon 3140 3227 . - . ID=exon-AB69_RS16895-1;Parent=rna-AB69_RS16895;anticodon=(pos:complement(3191..3193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS16895;product=tRNA-Ser NZ_JHDO01000072.1 RefSeq gene 3461 4399 . + . ID=gene-AB69_RS16890;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AB69_RS16890;old_locus_tag=AB69_1091 NZ_JHDO01000072.1 Protein Homology CDS 3461 4399 . + 0 ID=cds-WP_000351317.1;Parent=gene-AB69_RS16890;Dbxref=GenBank:WP_000351317.1;Name=WP_000351317.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AB69_RS16890;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351317.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 4454 5191 . + . ID=gene-AB69_RS16885;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AB69_RS16885;old_locus_tag=AB69_1092 NZ_JHDO01000072.1 Protein Homology CDS 4454 5191 . + 0 ID=cds-WP_000283667.1;Parent=gene-AB69_RS16885;Dbxref=GenBank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415552.1;locus_tag=AB69_RS16885;product=zinc-binding phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 5215 5769 . + . ID=gene-AB69_RS16880;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AB69_RS16880;old_locus_tag=AB69_1093 NZ_JHDO01000072.1 Protein Homology CDS 5215 5769 . + 0 ID=cds-WP_001001921.1;Parent=gene-AB69_RS16880;Dbxref=GenBank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AB69_RS16880;product=molecular chaperone YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 5871 6362 . + . ID=gene-AB69_RS16875;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AB69_RS16875;old_locus_tag=AB69_1095 NZ_JHDO01000072.1 Protein Homology CDS 5871 6362 . + 0 ID=cds-WP_001300785.1;Parent=gene-AB69_RS16875;Dbxref=GenBank:WP_001300785.1;Name=WP_001300785.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AB69_RS16875;product=DUF1097 domain-containing protein;protein_id=WP_001300785.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 6426 7259 . - . ID=gene-AB69_RS16870;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AB69_RS16870;old_locus_tag=AB69_1096 NZ_JHDO01000072.1 Protein Homology CDS 6426 7259 . - 0 ID=cds-WP_001189321.1;Parent=gene-AB69_RS16870;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AB69_RS16870;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 7286 7702 . - . ID=gene-AB69_RS16865;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AB69_RS16865;old_locus_tag=AB69_1097 NZ_JHDO01000072.1 Protein Homology CDS 7286 7702 . - 0 ID=cds-WP_001264088.1;Parent=gene-AB69_RS16865;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AB69_RS16865;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 7727 8116 . - . ID=gene-AB69_RS16860;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AB69_RS16860;old_locus_tag=AB69_1098 NZ_JHDO01000072.1 Protein Homology CDS 7727 8116 . - 0 ID=cds-WP_000833288.1;Parent=gene-AB69_RS16860;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AB69_RS16860;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 8121 8771 . - . ID=gene-AB69_RS16855;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AB69_RS16855;old_locus_tag=AB69_1099 NZ_JHDO01000072.1 Protein Homology CDS 8121 8771 . - 0 ID=cds-WP_000481509.1;Parent=gene-AB69_RS16855;Dbxref=GenBank:WP_000481509.1;Name=WP_000481509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415558.1;locus_tag=AB69_RS16855;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481509.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 9526 9981 . + . ID=gene-AB69_RS16845;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AB69_RS16845;old_locus_tag=AB69_1102 NZ_JHDO01000072.1 Protein Homology CDS 9526 9981 . + 0 ID=cds-WP_000791650.1;Parent=gene-AB69_RS16845;Dbxref=GenBank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AB69_RS16845;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 10022 10477 . + . ID=gene-AB69_RS16840;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AB69_RS16840;old_locus_tag=AB69_1103 NZ_JHDO01000072.1 Protein Homology CDS 10022 10477 . + 0 ID=cds-WP_000771437.1;Parent=gene-AB69_RS16840;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AB69_RS16840;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 10536 10868 . + . ID=gene-AB69_RS16835;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AB69_RS16835;old_locus_tag=AB69_1104 NZ_JHDO01000072.1 Protein Homology CDS 10536 10868 . + 0 ID=cds-WP_032230995.1;Parent=gene-AB69_RS16835;Dbxref=GenBank:WP_032230995.1;Name=WP_032230995.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AB69_RS16835;product=curli assembly chaperone CsgC;protein_id=WP_032230995.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 10989 11300 . + . ID=gene-AB69_RS16830;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AB69_RS16830;old_locus_tag=AB69_1105 NZ_JHDO01000072.1 Protein Homology CDS 10989 11300 . + 0 ID=cds-WP_000489587.1;Parent=gene-AB69_RS16830;Dbxref=GenBank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415562.1;locus_tag=AB69_RS16830;product=protein YmdA;protein_id=WP_000489587.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 11395 11928 . + . ID=gene-AB69_RS16825;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AB69_RS16825;old_locus_tag=AB69_1106 NZ_JHDO01000072.1 Protein Homology CDS 11395 11928 . + 0 ID=cds-WP_000857405.1;Parent=gene-AB69_RS16825;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AB69_RS16825;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 11870 13351 . + . ID=gene-AB69_RS16820;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AB69_RS16820;old_locus_tag=AB69_1107 NZ_JHDO01000072.1 Protein Homology CDS 11870 13351 . + 0 ID=cds-WP_001307714.1;Parent=gene-AB69_RS16820;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AB69_RS16820;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 13359 14516 . - . ID=gene-AB69_RS16815;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AB69_RS16815;old_locus_tag=AB69_1108 NZ_JHDO01000072.1 Protein Homology CDS 13359 14516 . - 0 ID=cds-WP_001070375.1;Parent=gene-AB69_RS16815;Dbxref=GenBank:WP_001070375.1;Name=WP_001070375.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415565.1;locus_tag=AB69_RS16815;product=glucans biosynthesis protein MdoC;protein_id=WP_001070375.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 14910 16445 . + . ID=gene-AB69_RS16805;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AB69_RS16805;old_locus_tag=AB69_1110 NZ_JHDO01000072.1 Protein Homology CDS 14910 16445 . + 0 ID=cds-WP_001343212.1;Parent=gene-AB69_RS16805;Dbxref=GenBank:WP_001343212.1;Name=WP_001343212.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AB69_RS16805;product=glucans biosynthesis protein MdoG;protein_id=WP_001343212.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 16438 18981 . + . ID=gene-AB69_RS16800;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AB69_RS16800;old_locus_tag=AB69_1111 NZ_JHDO01000072.1 Protein Homology CDS 16438 18981 . + 0 ID=cds-WP_001295445.1;Parent=gene-AB69_RS16800;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AB69_RS16800;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 19154 19381 . + . ID=gene-AB69_RS16795;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AB69_RS16795;old_locus_tag=AB69_1112 NZ_JHDO01000072.1 Protein Homology CDS 19154 19381 . + 0 ID=cds-WP_001237205.1;Parent=gene-AB69_RS16795;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AB69_RS16795;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 19382 19756 . - . ID=gene-AB69_RS16790;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AB69_RS16790;old_locus_tag=AB69_1113 NZ_JHDO01000072.1 Protein Homology CDS 19382 19756 . - 0 ID=cds-WP_000180056.1;Parent=gene-AB69_RS16790;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AB69_RS16790;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 19839 21065 . - . ID=gene-AB69_RS16785;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AB69_RS16785;old_locus_tag=AB69_1114 NZ_JHDO01000072.1 Protein Homology CDS 19839 21065 . - 0 ID=cds-WP_000074172.1;Parent=gene-AB69_RS16785;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AB69_RS16785;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 21237 22157 . - . ID=gene-AB69_RS16780;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AB69_RS16780;old_locus_tag=AB69_1115 NZ_JHDO01000072.1 Protein Homology CDS 21237 22157 . - 0 ID=cds-WP_000183364.1;Parent=gene-AB69_RS16780;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AB69_RS16780;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 22382 23434 . + . ID=gene-AB69_RS16775;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AB69_RS16775;old_locus_tag=AB69_1116 NZ_JHDO01000072.1 Protein Homology CDS 22382 23434 . + 0 ID=cds-WP_001144615.1;Parent=gene-AB69_RS16775;Dbxref=GenBank:WP_001144615.1;Name=WP_001144615.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415573.1;locus_tag=AB69_RS16775;product=rhodanese-related sulfurtransferase;protein_id=WP_001144615.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 23476 24051 . - . ID=gene-AB69_RS16770;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AB69_RS16770;old_locus_tag=AB69_1117 NZ_JHDO01000072.1 Protein Homology CDS 23476 24051 . - 0 ID=cds-WP_000749261.1;Parent=gene-AB69_RS16770;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AB69_RS16770;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 24055 24621 . - . ID=gene-AB69_RS16765;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=AB69_RS16765;old_locus_tag=AB69_1118 NZ_JHDO01000072.1 Protein Homology CDS 24055 24621 . - 0 ID=cds-WP_000011114.1;Parent=gene-AB69_RS16765;Dbxref=GenBank:WP_000011114.1;Name=WP_000011114.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415575.1;locus_tag=AB69_RS16765;product=cytochrome b;protein_id=WP_000011114.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 24882 24995 . - . ID=gene-AB69_RS16760;Name=AB69_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16760;old_locus_tag=AB69_1120 NZ_JHDO01000072.1 Protein Homology CDS 24882 24995 . - 0 ID=cds-WP_001253418.1;Parent=gene-AB69_RS16760;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AB69_RS16760;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 25043 26161 . - . ID=gene-AB69_RS16755;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AB69_RS16755;old_locus_tag=AB69_1121 NZ_JHDO01000072.1 Protein Homology CDS 25043 26161 . - 0 ID=cds-WP_000872833.1;Parent=gene-AB69_RS16755;Dbxref=GenBank:WP_000872833.1;Name=WP_000872833.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415577.1;locus_tag=AB69_RS16755;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872833.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 26276 26530 . - . ID=gene-AB69_RS16750;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AB69_RS16750;old_locus_tag=AB69_1122 NZ_JHDO01000072.1 Protein Homology CDS 26276 26530 . - 0 ID=cds-WP_000414438.1;Parent=gene-AB69_RS16750;Dbxref=GenBank:WP_000414438.1;Name=WP_000414438.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415578.3;locus_tag=AB69_RS16750;product=biofilm formation regulator BssS;protein_id=WP_000414438.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 26818 27063 . - . ID=gene-AB69_RS16745;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AB69_RS16745;old_locus_tag=AB69_1123 NZ_JHDO01000072.1 Protein Homology CDS 26818 27063 . - 0 ID=cds-WP_001217754.1;Parent=gene-AB69_RS16745;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AB69_RS16745;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 27137 28183 . - . ID=gene-AB69_RS16740;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AB69_RS16740;old_locus_tag=AB69_1124 NZ_JHDO01000072.1 Protein Homology CDS 27137 28183 . - 0 ID=cds-WP_000126534.1;Parent=gene-AB69_RS16740;Dbxref=GenBank:WP_000126534.1;Name=WP_000126534.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AB69_RS16740;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 28289 28849 . - . ID=gene-AB69_RS16735;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AB69_RS16735;old_locus_tag=AB69_1125 NZ_JHDO01000072.1 Protein Homology CDS 28289 28849 . - 0 ID=cds-WP_001295443.1;Parent=gene-AB69_RS16735;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AB69_RS16735;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 28983 29630 . - . ID=gene-AB69_RS16730;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AB69_RS16730;old_locus_tag=AB69_1126 NZ_JHDO01000072.1 Protein Homology CDS 28983 29630 . - 0 ID=cds-WP_000780912.1;Parent=gene-AB69_RS16730;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AB69_RS16730;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 29694 30902 . - . ID=gene-AB69_RS16725;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AB69_RS16725;old_locus_tag=AB69_1127 NZ_JHDO01000072.1 Protein Homology CDS 29694 30902 . - 0 ID=cds-WP_000092206.1;Parent=gene-AB69_RS16725;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AB69_RS16725;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 31138 31722 . + . ID=gene-AB69_RS16720;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AB69_RS16720;old_locus_tag=AB69_1128 NZ_JHDO01000072.1 Protein Homology CDS 31138 31722 . + 0 ID=cds-WP_000468186.1;Parent=gene-AB69_RS16720;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AB69_RS16720;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 31733 32380 . + . ID=gene-AB69_RS16715;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AB69_RS16715;old_locus_tag=AB69_1129 NZ_JHDO01000072.1 Protein Homology CDS 31733 32380 . + 0 ID=cds-WP_000877107.1;Parent=gene-AB69_RS16715;Dbxref=GenBank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415585.1;locus_tag=AB69_RS16715;product=YceH family protein;protein_id=WP_000877107.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 32382 33305 . + . ID=gene-AB69_RS16710;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AB69_RS16710;old_locus_tag=AB69_1130 NZ_JHDO01000072.1 Protein Homology CDS 32382 33305 . + 0 ID=cds-WP_000736158.1;Parent=gene-AB69_RS16710;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AB69_RS16710;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 33415 34950 . + . ID=gene-AB69_RS16705;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AB69_RS16705;old_locus_tag=AB69_1131 NZ_JHDO01000072.1 Protein Homology CDS 33415 34950 . + 0 ID=cds-WP_001050683.1;Parent=gene-AB69_RS16705;Dbxref=GenBank:WP_001050683.1;Name=WP_001050683.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AB69_RS16705;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 34990 35406 . - . ID=gene-AB69_RS16700;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AB69_RS16700;old_locus_tag=AB69_1132 NZ_JHDO01000072.1 Protein Homology CDS 34990 35406 . - 0 ID=cds-WP_000197363.1;Parent=gene-AB69_RS16700;Dbxref=GenBank:WP_000197363.1;Name=WP_000197363.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AB69_RS16700;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197363.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 35411 35704 . - . ID=gene-AB69_RS16695;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AB69_RS16695;old_locus_tag=AB69_1133 NZ_JHDO01000072.1 Protein Homology CDS 35411 35704 . - 0 ID=cds-WP_000020880.1;Parent=gene-AB69_RS16695;Dbxref=GenBank:WP_000020880.1;Name=WP_000020880.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AB69_RS16695;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 35780 36439 . - . ID=gene-AB69_RS0123830;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AB69_RS0123830;old_locus_tag=AB69_1134 NZ_JHDO01000072.1 Protein Homology CDS 35780 36439 . - 0 ID=cds-WP_000905458.1;Parent=gene-AB69_RS0123830;Dbxref=GenBank:WP_000905458.1;Name=WP_000905458.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AB69_RS0123830;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000905458.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 36594 37010 . + . ID=gene-AB69_RS16690;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AB69_RS16690;old_locus_tag=AB69_1136 NZ_JHDO01000072.1 Protein Homology CDS 36594 37010 . + 0 ID=cds-WP_000884702.1;Parent=gene-AB69_RS16690;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AB69_RS16690;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 37014 37418 . + . ID=gene-AB69_RS16685;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AB69_RS16685;old_locus_tag=AB69_1137 NZ_JHDO01000072.1 Protein Homology CDS 37014 37418 . + 0 ID=cds-WP_001196460.1;Parent=gene-AB69_RS16685;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AB69_RS16685;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 37430 38125 . + . ID=gene-AB69_RS16680;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AB69_RS16680;old_locus_tag=AB69_1138 NZ_JHDO01000072.1 Protein Homology CDS 37430 38125 . + 0 ID=cds-WP_000020486.1;Parent=gene-AB69_RS16680;Dbxref=GenBank:WP_000020486.1;Name=WP_000020486.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415593.1;locus_tag=AB69_RS16680;product=flagellar hook assembly protein FlgD;protein_id=WP_000020486.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 38150 39358 . + . ID=gene-AB69_RS16675;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AB69_RS16675;old_locus_tag=AB69_1139 NZ_JHDO01000072.1 Protein Homology CDS 38150 39358 . + 0 ID=cds-WP_000885873.1;Parent=gene-AB69_RS16675;Dbxref=GenBank:WP_000885873.1;Name=WP_000885873.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AB69_RS16675;product=flagellar hook protein FlgE;protein_id=WP_000885873.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 39378 40133 . + . ID=gene-AB69_RS16670;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AB69_RS16670;old_locus_tag=AB69_1140 NZ_JHDO01000072.1 Protein Homology CDS 39378 40133 . + 0 ID=cds-WP_000349316.1;Parent=gene-AB69_RS16670;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AB69_RS16670;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 40305 41087 . + . ID=gene-AB69_RS16665;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AB69_RS16665;old_locus_tag=AB69_1141 NZ_JHDO01000072.1 Protein Homology CDS 40305 41087 . + 0 ID=cds-WP_000625837.1;Parent=gene-AB69_RS16665;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AB69_RS16665;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 41140 41838 . + . ID=gene-AB69_RS16660;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AB69_RS16660;old_locus_tag=AB69_1142 NZ_JHDO01000072.1 Protein Homology CDS 41140 41838 . + 0 ID=cds-WP_001295442.1;Parent=gene-AB69_RS16660;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AB69_RS16660;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 41850 42947 . + . ID=gene-AB69_RS16655;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AB69_RS16655;old_locus_tag=AB69_1143 NZ_JHDO01000072.1 Protein Homology CDS 41850 42947 . + 0 ID=cds-WP_000589326.1;Parent=gene-AB69_RS16655;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AB69_RS16655;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 42947 43888 . + . ID=gene-AB69_RS16650;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AB69_RS16650;old_locus_tag=AB69_1144 NZ_JHDO01000072.1 Protein Homology CDS 42947 43888 . + 0 ID=cds-WP_001295441.1;Parent=gene-AB69_RS16650;Dbxref=GenBank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AB69_RS16650;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 43954 45597 . + . ID=gene-AB69_RS16645;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AB69_RS16645;old_locus_tag=AB69_1145 NZ_JHDO01000072.1 Protein Homology CDS 43954 45597 . + 0 ID=cds-WP_000096479.1;Parent=gene-AB69_RS16645;Dbxref=GenBank:WP_000096479.1;Name=WP_000096479.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AB69_RS16645;product=flagellar hook-associated protein FlgK;protein_id=WP_000096479.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 45609 46562 . + . ID=gene-AB69_RS16640;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AB69_RS16640;old_locus_tag=AB69_1146 NZ_JHDO01000072.1 Protein Homology CDS 45609 46562 . + 0 ID=cds-WP_001212782.1;Parent=gene-AB69_RS16640;Dbxref=GenBank:WP_001212782.1;Name=WP_001212782.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AB69_RS16640;product=flagellar hook-associated protein FlgL;protein_id=WP_001212782.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 46758 49943 . - . ID=gene-AB69_RS16635;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AB69_RS16635;old_locus_tag=AB69_1147 NZ_JHDO01000072.1 Protein Homology CDS 46758 49943 . - 0 ID=cds-WP_000827360.1;Parent=gene-AB69_RS16635;Dbxref=GenBank:WP_000827360.1;Name=WP_000827360.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=AB69_RS16635;product=ribonuclease E;protein_id=WP_000827360.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 50516 51475 . + . ID=gene-AB69_RS16630;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AB69_RS16630;old_locus_tag=AB69_1149 NZ_JHDO01000072.1 Protein Homology CDS 50516 51475 . + 0 ID=cds-WP_000846343.1;Parent=gene-AB69_RS16630;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AB69_RS16630;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 51587 52171 . - . ID=gene-AB69_RS16625;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AB69_RS16625;old_locus_tag=AB69_1151 NZ_JHDO01000072.1 Protein Homology CDS 51587 52171 . - 0 ID=cds-WP_001125202.1;Parent=gene-AB69_RS16625;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AB69_RS16625;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 52370 52891 . + . ID=gene-AB69_RS16620;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AB69_RS16620;old_locus_tag=AB69_1152 NZ_JHDO01000072.1 Protein Homology CDS 52370 52891 . + 0 ID=cds-WP_001174481.1;Parent=gene-AB69_RS16620;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AB69_RS16620;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 52943 53116 . + . ID=gene-AB69_RS16615;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AB69_RS16615;old_locus_tag=AB69_1153 NZ_JHDO01000072.1 Protein Homology CDS 52943 53116 . + 0 ID=cds-WP_000290727.1;Parent=gene-AB69_RS16615;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AB69_RS16615;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 53197 54267 . + . ID=gene-AB69_RS16610;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AB69_RS16610;old_locus_tag=AB69_1154 NZ_JHDO01000072.1 Protein Homology CDS 53197 54267 . + 0 ID=cds-WP_071996070.1;Parent=gene-AB69_RS16610;Dbxref=GenBank:WP_071996070.1;Name=WP_071996070.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AB69_RS16610;product=phosphate acyltransferase PlsX;protein_id=WP_071996070.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 54335 55288 . + . ID=gene-AB69_RS16605;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AB69_RS16605;old_locus_tag=AB69_1155 NZ_JHDO01000072.1 Protein Homology CDS 54335 55288 . + 0 ID=cds-WP_000288132.1;Parent=gene-AB69_RS16605;Dbxref=GenBank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AB69_RS16605;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 55304 56233 . + . ID=gene-AB69_RS16600;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AB69_RS16600;old_locus_tag=AB69_1156 NZ_JHDO01000072.1 Protein Homology CDS 55304 56233 . + 0 ID=cds-WP_000191372.1;Parent=gene-AB69_RS16600;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AB69_RS16600;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 56246 56980 . + . ID=gene-AB69_RS16595;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AB69_RS16595;old_locus_tag=AB69_1157 NZ_JHDO01000072.1 Protein Homology CDS 56246 56980 . + 0 ID=cds-WP_001008535.1;Parent=gene-AB69_RS16595;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AB69_RS16595;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 57191 57427 . + . ID=gene-AB69_RS16590;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AB69_RS16590;old_locus_tag=AB69_1158 NZ_JHDO01000072.1 Protein Homology CDS 57191 57427 . + 0 ID=cds-WP_000103754.1;Parent=gene-AB69_RS16590;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AB69_RS16590;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 57515 58756 . + . ID=gene-AB69_RS16585;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AB69_RS16585;old_locus_tag=AB69_1159 NZ_JHDO01000072.1 Protein Homology CDS 57515 58756 . + 0 ID=cds-WP_000044679.1;Parent=gene-AB69_RS16585;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AB69_RS16585;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 58876 59685 . + . ID=gene-AB69_RS16580;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AB69_RS16580;old_locus_tag=AB69_1160 NZ_JHDO01000072.1 Protein Homology CDS 58876 59685 . + 0 ID=cds-WP_000478681.1;Parent=gene-AB69_RS16580;Dbxref=GenBank:WP_000478681.1;Name=WP_000478681.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415614.1;locus_tag=AB69_RS16580;product=aminodeoxychorismate lyase;protein_id=WP_000478681.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 59688 60710 . + . ID=gene-AB69_RS16575;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AB69_RS16575;old_locus_tag=AB69_1161 NZ_JHDO01000072.1 Protein Homology CDS 59688 60710 . + 0 ID=cds-WP_000756827.1;Parent=gene-AB69_RS16575;Dbxref=GenBank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AB69_RS16575;product=cell division protein YceG;protein_id=WP_000756827.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 60700 61341 . + . ID=gene-AB69_RS16570;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AB69_RS16570;old_locus_tag=AB69_1162 NZ_JHDO01000072.1 Protein Homology CDS 60700 61341 . + 0 ID=cds-WP_001257000.1;Parent=gene-AB69_RS16570;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AB69_RS16570;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 61338 62342 . + . ID=gene-AB69_RS16565;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AB69_RS16565;old_locus_tag=AB69_1163 NZ_JHDO01000072.1 Protein Homology CDS 61338 62342 . + 0 ID=cds-WP_001267956.1;Parent=gene-AB69_RS16565;Dbxref=GenBank:WP_001267956.1;Name=WP_001267956.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415617.1;locus_tag=AB69_RS16565;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 62353 63150 . + . ID=gene-AB69_RS16560;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AB69_RS16560;old_locus_tag=AB69_1164 NZ_JHDO01000072.1 Protein Homology CDS 62353 63150 . + 0 ID=cds-WP_000480245.1;Parent=gene-AB69_RS16560;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AB69_RS16560;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 63445 64878 . + . ID=gene-AB69_RS16555;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AB69_RS16555;old_locus_tag=AB69_1165 NZ_JHDO01000072.1 Protein Homology CDS 63445 64878 . + 0 ID=cds-WP_000475719.1;Parent=gene-AB69_RS16555;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AB69_RS16555;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 64938 67127 . - . ID=gene-AB69_RS16550;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AB69_RS16550;old_locus_tag=AB69_1166 NZ_JHDO01000072.1 Protein Homology CDS 64938 67127 . - 0 ID=cds-WP_032231000.1;Parent=gene-AB69_RS16550;Dbxref=GenBank:WP_032231000.1;Name=WP_032231000.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415620.1;locus_tag=AB69_RS16550;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_032231000.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 67461 67820 . + . ID=gene-AB69_RS16545;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AB69_RS16545;old_locus_tag=AB69_1167 NZ_JHDO01000072.1 Protein Homology CDS 67461 67820 . + 0 ID=cds-WP_000807125.1;Parent=gene-AB69_RS16545;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AB69_RS16545;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 67823 68200 . + . ID=gene-AB69_RS16540;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AB69_RS16540;old_locus_tag=AB69_1168 NZ_JHDO01000072.1 Protein Homology CDS 67823 68200 . + 0 ID=cds-WP_001225295.1;Parent=gene-AB69_RS16540;Dbxref=GenBank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415622.1;locus_tag=AB69_RS16540;product=YcfL family protein;protein_id=WP_001225295.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 68214 68855 . + . ID=gene-AB69_RS16535;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AB69_RS16535;old_locus_tag=AB69_1169 NZ_JHDO01000072.1 Protein Homology CDS 68214 68855 . + 0 ID=cds-WP_000164439.1;Parent=gene-AB69_RS16535;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AB69_RS16535;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 68836 69660 . + . ID=gene-AB69_RS16530;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AB69_RS16530;old_locus_tag=AB69_1170 NZ_JHDO01000072.1 Protein Homology CDS 68836 69660 . + 0 ID=cds-WP_001116592.1;Parent=gene-AB69_RS16530;Dbxref=GenBank:WP_001116592.1;Name=WP_001116592.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415624.1;locus_tag=AB69_RS16530;product=thiamine kinase;protein_id=WP_001116592.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 69671 70696 . + . ID=gene-AB69_RS16525;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AB69_RS16525;old_locus_tag=AB69_1171 NZ_JHDO01000072.1 Protein Homology CDS 69671 70696 . + 0 ID=cds-WP_000529320.1;Parent=gene-AB69_RS16525;Dbxref=GenBank:WP_000529320.1;Name=WP_000529320.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AB69_RS16525;product=beta-N-acetylhexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 70719 71261 . + . ID=gene-AB69_RS16520;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AB69_RS16520;old_locus_tag=AB69_1172 NZ_JHDO01000072.1 Protein Homology CDS 70719 71261 . + 0 ID=cds-WP_000587933.1;Parent=gene-AB69_RS16520;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AB69_RS16520;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 71661 72965 . + . ID=gene-AB69_RS16515;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AB69_RS16515;old_locus_tag=AB69_1173 NZ_JHDO01000072.1 Protein Homology CDS 71661 72965 . + 0 ID=cds-WP_000211045.1;Parent=gene-AB69_RS16515;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AB69_RS16515;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 73175 73714 . + . ID=gene-AB69_RS16510;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AB69_RS16510;old_locus_tag=AB69_1174 NZ_JHDO01000072.1 Protein Homology CDS 73175 73714 . + 0 ID=cds-WP_001043459.1;Parent=gene-AB69_RS16510;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AB69_RS16510;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 73776 74408 . - . ID=gene-AB69_RS16505;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AB69_RS16505;old_locus_tag=AB69_1175 NZ_JHDO01000072.1 Protein Homology CDS 73776 74408 . - 0 ID=cds-WP_001336528.1;Parent=gene-AB69_RS16505;Dbxref=GenBank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AB69_RS16505;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_001336528.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 74649 74906 . + . ID=gene-AB69_RS16500;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AB69_RS16500;old_locus_tag=AB69_1176 NZ_JHDO01000072.1 Protein Homology CDS 74649 74906 . + 0 ID=cds-WP_000800153.1;Parent=gene-AB69_RS16500;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AB69_RS16500;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 74988 75950 . - . ID=gene-AB69_RS16495;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AB69_RS16495;old_locus_tag=AB69_1177 NZ_JHDO01000072.1 Protein Homology CDS 74988 75950 . - 0 ID=cds-WP_001300895.1;Parent=gene-AB69_RS16495;Dbxref=GenBank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AB69_RS16495;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 76094 79540 . - . ID=gene-AB69_RS16490;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AB69_RS16490;old_locus_tag=AB69_1178 NZ_JHDO01000072.1 Protein Homology CDS 76094 79540 . - 0 ID=cds-WP_001115094.1;Parent=gene-AB69_RS16490;Dbxref=GenBank:WP_001115094.1;Name=WP_001115094.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AB69_RS16490;product=transcription-repair coupling factor;protein_id=WP_001115094.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 79668 80741 . - . ID=gene-AB69_RS16485;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AB69_RS16485;old_locus_tag=AB69_1179 NZ_JHDO01000072.1 Protein Homology CDS 79668 80741 . - 0 ID=cds-WP_000810253.1;Parent=gene-AB69_RS16485;Dbxref=GenBank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AB69_RS16485;product=acyltransferase family protein;protein_id=WP_000810253.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 81003 82202 . + . ID=gene-AB69_RS16480;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AB69_RS16480;old_locus_tag=AB69_1180 NZ_JHDO01000072.1 Protein Homology CDS 81003 82202 . + 0 ID=cds-WP_000284714.1;Parent=gene-AB69_RS16480;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AB69_RS16480;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 82195 82896 . + . ID=gene-AB69_RS16475;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AB69_RS16475;old_locus_tag=AB69_1181 NZ_JHDO01000072.1 Protein Homology CDS 82195 82896 . + 0 ID=cds-WP_001033694.1;Parent=gene-AB69_RS16475;Dbxref=GenBank:WP_001033694.1;Name=WP_001033694.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=AB69_RS16475;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 82896 84140 . + . ID=gene-AB69_RS16470;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AB69_RS16470;old_locus_tag=AB69_1182 NZ_JHDO01000072.1 Protein Homology CDS 82896 84140 . + 0 ID=cds-WP_001251348.1;Parent=gene-AB69_RS16470;Dbxref=GenBank:WP_001251348.1;Name=WP_001251348.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AB69_RS16470;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 84169 85080 . + . ID=gene-AB69_RS16465;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AB69_RS16465;old_locus_tag=AB69_1183 NZ_JHDO01000072.1 Protein Homology CDS 84169 85080 . + 0 ID=cds-WP_000291268.1;Parent=gene-AB69_RS16465;Dbxref=GenBank:WP_000291268.1;Name=WP_000291268.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AB69_RS16465;product=N-acetylglucosamine kinase;protein_id=WP_000291268.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 85096 85935 . + . ID=gene-AB69_RS16460;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AB69_RS16460;old_locus_tag=AB69_1184 NZ_JHDO01000072.1 Protein Homology CDS 85096 85935 . + 0 ID=cds-WP_000952737.1;Parent=gene-AB69_RS16460;Dbxref=GenBank:WP_000952737.1;Name=WP_000952737.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AB69_RS16460;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 86054 86842 . - . ID=gene-AB69_RS16455;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AB69_RS16455;old_locus_tag=AB69_1185 NZ_JHDO01000072.1 Protein Homology CDS 86054 86842 . - 0 ID=cds-WP_032231002.1;Parent=gene-AB69_RS16455;Dbxref=GenBank:WP_032231002.1;Name=WP_032231002.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AB69_RS16455;product=TPM domain-containing protein;protein_id=WP_032231002.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 86839 87300 . - . ID=gene-AB69_RS16450;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;locus_tag=AB69_RS16450;old_locus_tag=AB69_1186 NZ_JHDO01000072.1 Protein Homology CDS 86839 87300 . - 0 ID=cds-WP_000076376.1;Parent=gene-AB69_RS16450;Dbxref=GenBank:WP_000076376.1;Name=WP_000076376.1;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AB69_RS16450;product=DUF3592 domain-containing protein;protein_id=WP_000076376.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 87358 88404 . - . ID=gene-AB69_RS16445;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AB69_RS16445;old_locus_tag=AB69_1187 NZ_JHDO01000072.1 Protein Homology CDS 87358 88404 . - 0 ID=cds-WP_000759317.1;Parent=gene-AB69_RS16445;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AB69_RS16445;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 88401 89195 . - . ID=gene-AB69_RS16440;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AB69_RS16440;old_locus_tag=AB69_1188 NZ_JHDO01000072.1 Protein Homology CDS 88401 89195 . - 0 ID=cds-WP_000580316.1;Parent=gene-AB69_RS16440;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AB69_RS16440;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 89362 90480 . - . ID=gene-AB69_RS16435;Name=AB69_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16435;old_locus_tag=AB69_1189 NZ_JHDO01000072.1 Protein Homology CDS 89362 90480 . - 0 ID=cds-WP_000074976.1;Parent=gene-AB69_RS16435;Dbxref=GenBank:WP_000074976.1;Name=WP_000074976.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309528.1;locus_tag=AB69_RS16435;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_000074976.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 90449 90718 . - . ID=gene-AB69_RS16430;Name=AB69_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16430;old_locus_tag=AB69_1190 NZ_JHDO01000072.1 Protein Homology CDS 90449 90718 . - 0 ID=cds-WP_000003742.1;Parent=gene-AB69_RS16430;Dbxref=GenBank:WP_000003742.1;Name=WP_000003742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309529.1;locus_tag=AB69_RS16430;product=excisionase;protein_id=WP_000003742.1;transl_table=11 NZ_JHDO01000072.1 RefSeq gene 90780 91568 . - . ID=gene-AB69_RS16425;Name=AB69_RS16425;end_range=91568,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16425;old_locus_tag=AB69_1191;partial=true NZ_JHDO01000072.1 Protein Homology CDS 90780 91568 . - 0 ID=cds-WP_204361963.1;Parent=gene-AB69_RS16425;Dbxref=GenBank:WP_204361963.1;Name=WP_204361963.1;end_range=91568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AB69_RS16425;partial=true;product=3'-5' exonuclease;protein_id=WP_204361963.1;transl_table=11 ##sequence-region NZ_JHDO01000073.1 1 20699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000073.1 RefSeq region 1 20699 . + . ID=NZ_JHDO01000073.1:1..20699;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000073.1 RefSeq gene 1 295 . + . ID=gene-AB69_RS16420;Name=AB69_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16420;old_locus_tag=AB69_1192;partial=true;start_range=.,1 NZ_JHDO01000073.1 Protein Homology CDS 1 295 . + 1 ID=cds-WP_032235674.1-2;Parent=gene-AB69_RS16420;Dbxref=GenBank:WP_032235674.1;Name=WP_032235674.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976766.1;locus_tag=AB69_RS16420;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235674.1;start_range=.,1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 556 632 . + . ID=gene-AB69_RS16415;Name=AB69_RS16415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS16415;old_locus_tag=AB69_1194 NZ_JHDO01000073.1 tRNAscan-SE tRNA 556 632 . + . ID=rna-AB69_RS16415;Parent=gene-AB69_RS16415;anticodon=(pos:590..592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS16415;product=tRNA-Arg NZ_JHDO01000073.1 tRNAscan-SE exon 556 632 . + . ID=exon-AB69_RS16415-1;Parent=rna-AB69_RS16415;anticodon=(pos:590..592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS16415;product=tRNA-Arg NZ_JHDO01000073.1 RefSeq gene 648 1811 . - . ID=gene-AB69_RS16410;Name=intD;gbkey=Gene;gene=intD;gene_biotype=protein_coding;locus_tag=AB69_RS16410;old_locus_tag=AB69_1195 NZ_JHDO01000073.1 Protein Homology CDS 648 1811 . - 0 ID=cds-WP_032230878.1;Parent=gene-AB69_RS16410;Dbxref=GenBank:WP_032230878.1;Name=WP_032230878.1;gbkey=CDS;gene=intD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=AB69_RS16410;product=integrase;protein_id=WP_032230878.1;transl_table=11 NZ_JHDO01000073.1 RefSeq pseudogene 1962 2081 . - . ID=gene-AB69_RS30210;Name=AB69_RS30210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30210;old_locus_tag=AB69_1196;partial=true;pseudo=true;start_range=.,1962 NZ_JHDO01000073.1 Protein Homology CDS 1962 2081 . - 0 ID=cds-AB69_RS30210;Parent=gene-AB69_RS30210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311033.1;locus_tag=AB69_RS30210;partial=true;product=TraR/DksA family transcriptional regulator;pseudo=true;start_range=.,1962;transl_table=11 NZ_JHDO01000073.1 RefSeq pseudogene 2180 2257 . - . ID=gene-AB69_RS29945;Name=AB69_RS29945;end_range=2257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29945;partial=true;pseudo=true NZ_JHDO01000073.1 Protein Homology CDS 2180 2257 . - 0 ID=cds-AB69_RS29945;Parent=gene-AB69_RS29945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239470.1;locus_tag=AB69_RS29945;partial=true;product=cell division protein ZapA;pseudo=true;transl_table=11 NZ_JHDO01000073.1 RefSeq pseudogene 2254 2562 . + . ID=gene-AB69_RS0123850;Name=AB69_RS0123850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0123850;old_locus_tag=AB69_1197;partial=true;pseudo=true;start_range=.,2254 NZ_JHDO01000073.1 Protein Homology CDS 2254 2562 . + 0 ID=cds-AB69_RS0123850;Parent=gene-AB69_RS0123850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AB69_RS0123850;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,2254;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 2535 2672 . + . ID=gene-AB69_RS30700;Name=AB69_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30700 NZ_JHDO01000073.1 Protein Homology CDS 2535 2672 . + 0 ID=cds-WP_001309429.1;Parent=gene-AB69_RS30700;Dbxref=GenBank:WP_001309429.1;Name=WP_001309429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309429.1;locus_tag=AB69_RS30700;product=hypothetical protein;protein_id=WP_001309429.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 2617 3285 . - . ID=gene-AB69_RS0123855;Name=AB69_RS0123855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123855 NZ_JHDO01000073.1 Protein Homology CDS 2617 3285 . - 0 ID=cds-WP_000239881.1;Parent=gene-AB69_RS0123855;Dbxref=GenBank:WP_000239881.1;Name=WP_000239881.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AB69_RS0123855;product=class I SAM-dependent methyltransferase;protein_id=WP_000239881.1;transl_table=11 NZ_JHDO01000073.1 RefSeq pseudogene 3435 3608 . + . ID=gene-AB69_RS16405;Name=AB69_RS16405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS16405;old_locus_tag=AB69_1198;partial=true;pseudo=true;start_range=.,3435 NZ_JHDO01000073.1 Protein Homology CDS 3435 3608 . + 0 ID=cds-AB69_RS16405;Parent=gene-AB69_RS16405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AB69_RS16405;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,3435;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 3840 4703 . - . ID=gene-AB69_RS16400;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AB69_RS16400;old_locus_tag=AB69_1199 NZ_JHDO01000073.1 Protein Homology CDS 3840 4703 . - 0 ID=cds-WP_000799406.1;Parent=gene-AB69_RS16400;Dbxref=GenBank:WP_000799406.1;Name=WP_000799406.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309597.3;locus_tag=AB69_RS16400;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799406.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 4687 5823 . - . ID=gene-AB69_RS16395;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AB69_RS16395;old_locus_tag=AB69_1200 NZ_JHDO01000073.1 Protein Homology CDS 4687 5823 . - 0 ID=cds-WP_000531601.1;Parent=gene-AB69_RS16395;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AB69_RS16395;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 6073 7299 . + . ID=gene-AB69_RS16385;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AB69_RS16385;old_locus_tag=AB69_1202 NZ_JHDO01000073.1 Protein Homology CDS 6073 7299 . + 0 ID=cds-WP_000359434.1;Parent=gene-AB69_RS16385;Dbxref=GenBank:WP_000359434.1;Name=WP_000359434.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415645.1;locus_tag=AB69_RS16385;product=peptidase T;protein_id=WP_000359434.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 7348 8469 . - . ID=gene-AB69_RS16380;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AB69_RS16380;old_locus_tag=AB69_1203 NZ_JHDO01000073.1 Protein Homology CDS 7348 8469 . - 0 ID=cds-WP_000456506.1;Parent=gene-AB69_RS16380;Dbxref=GenBank:WP_000456506.1;Name=WP_000456506.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415646.4;locus_tag=AB69_RS16380;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456506.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 8545 10005 . - . ID=gene-AB69_RS16375;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AB69_RS16375;old_locus_tag=AB69_1204 NZ_JHDO01000073.1 Protein Homology CDS 8545 10005 . - 0 ID=cds-WP_000735412.1;Parent=gene-AB69_RS16375;Dbxref=GenBank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AB69_RS16375;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 10005 10676 . - . ID=gene-AB69_RS16370;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AB69_RS16370;old_locus_tag=AB69_1205 NZ_JHDO01000073.1 Protein Homology CDS 10005 10676 . - 0 ID=cds-WP_001265471.1;Parent=gene-AB69_RS16370;Dbxref=GenBank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AB69_RS16370;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 10845 12215 . - . ID=gene-AB69_RS16365;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AB69_RS16365;old_locus_tag=AB69_1206 NZ_JHDO01000073.1 Protein Homology CDS 10845 12215 . - 0 ID=cds-WP_000423742.1;Parent=gene-AB69_RS16365;Dbxref=GenBank:WP_000423742.1;Name=WP_000423742.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AB69_RS16365;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 12219 12860 . - . ID=gene-AB69_RS16360;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AB69_RS16360;old_locus_tag=AB69_1207 NZ_JHDO01000073.1 Protein Homology CDS 12219 12860 . - 0 ID=cds-WP_001297479.1;Parent=gene-AB69_RS16360;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AB69_RS16360;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 12896 14002 . - . ID=gene-AB69_RS16355;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AB69_RS16355;old_locus_tag=AB69_1208 NZ_JHDO01000073.1 Protein Homology CDS 12896 14002 . - 0 ID=cds-WP_001297484.1;Parent=gene-AB69_RS16355;Dbxref=GenBank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AB69_RS16355;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 14056 14517 . - . ID=gene-AB69_RS16350;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AB69_RS16350;old_locus_tag=AB69_1209 NZ_JHDO01000073.1 Protein Homology CDS 14056 14517 . - 0 ID=cds-WP_000476093.1;Parent=gene-AB69_RS16350;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AB69_RS16350;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 14527 15180 . - . ID=gene-AB69_RS16345;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AB69_RS16345;old_locus_tag=AB69_1210 NZ_JHDO01000073.1 Protein Homology CDS 14527 15180 . - 0 ID=cds-WP_001248691.1;Parent=gene-AB69_RS16345;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AB69_RS16345;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 15352 16602 . + . ID=gene-AB69_RS16340;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AB69_RS16340;old_locus_tag=AB69_1211 NZ_JHDO01000073.1 Protein Homology CDS 15352 16602 . + 0 ID=cds-WP_000444488.1;Parent=gene-AB69_RS16340;Dbxref=GenBank:WP_000444488.1;Name=WP_000444488.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AB69_RS16340;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444488.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 16705 17028 . - . ID=gene-AB69_RS0123860;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AB69_RS0123860 NZ_JHDO01000073.1 Protein Homology CDS 16705 17028 . - 0 ID=cds-WP_001295666.1;Parent=gene-AB69_RS0123860;Dbxref=GenBank:WP_001295666.1;Name=WP_001295666.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AB69_RS0123860;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 17283 17327 . - . ID=gene-AB69_RS29950;Name=AB69_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29950 NZ_JHDO01000073.1 Protein Homology CDS 17283 17327 . - 0 ID=cds-WP_120795380.1;Parent=gene-AB69_RS29950;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AB69_RS29950;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 17563 17673 . - . ID=gene-AB69_RS29715;Name=AB69_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29715 NZ_JHDO01000073.1 Protein Homology CDS 17563 17673 . - 0 ID=cds-WP_032082692.1;Parent=gene-AB69_RS29715;Dbxref=GenBank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AB69_RS29715;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 17726 18130 . - . ID=gene-AB69_RS16335;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AB69_RS16335;old_locus_tag=AB69_1212 NZ_JHDO01000073.1 Protein Homology CDS 17726 18130 . - 0 ID=cds-WP_000373101.1;Parent=gene-AB69_RS16335;Dbxref=GenBank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AB69_RS16335;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 18351 19082 . - . ID=gene-AB69_RS16330;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AB69_RS16330;old_locus_tag=AB69_1213 NZ_JHDO01000073.1 Protein Homology CDS 18351 19082 . - 0 ID=cds-WP_000332303.1;Parent=gene-AB69_RS16330;Dbxref=GenBank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AB69_RS16330;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 NZ_JHDO01000073.1 RefSeq pseudogene 19287 19442 . - . ID=gene-AB69_RS16325;Name=AB69_RS16325;end_range=19442,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS16325;old_locus_tag=AB69_1214;partial=true;pseudo=true NZ_JHDO01000073.1 Protein Homology CDS 19287 19442 . - 0 ID=cds-AB69_RS16325;Parent=gene-AB69_RS16325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19442,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AB69_RS16325;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000073.1 RefSeq gene 19507 20669 . + . ID=gene-AB69_RS16315;Name=AB69_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16315;old_locus_tag=AB69_1216 NZ_JHDO01000073.1 Protein Homology CDS 19507 19768 . + 0 ID=cds-WP_113706132.1-4;Parent=gene-AB69_RS16315;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16315;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000073.1 Protein Homology CDS 19768 20669 . + 2 ID=cds-WP_113706132.1-4;Parent=gene-AB69_RS16315;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16315;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 ##sequence-region NZ_JHDO01000074.1 1 56103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000074.1 RefSeq region 1 56103 . + . ID=NZ_JHDO01000074.1:1..56103;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000074.1 RefSeq gene 38 1200 . + . ID=gene-AB69_RS16305;Name=AB69_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16305;old_locus_tag=AB69_1218 NZ_JHDO01000074.1 Protein Homology CDS 38 299 . + 0 ID=cds-WP_113706132.1-5;Parent=gene-AB69_RS16305;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16305;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000074.1 Protein Homology CDS 299 1200 . + 2 ID=cds-WP_113706132.1-5;Parent=gene-AB69_RS16305;Dbxref=GenBank:WP_113706132.1;Name=WP_113706132.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB69_RS16305;product=IS3-like element IS3 family transposase;protein_id=WP_113706132.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 1214 2290 . - . ID=gene-AB69_RS16300;Name=AB69_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16300;old_locus_tag=AB69_1219 NZ_JHDO01000074.1 Protein Homology CDS 1214 2290 . - 0 ID=cds-WP_050428485.1;Parent=gene-AB69_RS16300;Dbxref=GenBank:WP_050428485.1;Name=WP_050428485.1;Ontology_term=GO:0007165,GO:0071111,GO:0071949;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA,FAD binding|0071949||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AB69_RS16300;product=diguanylate phosphodiesterase;protein_id=WP_050428485.1;transl_table=11 NZ_JHDO01000074.1 RefSeq pseudogene 2604 2840 . + . ID=gene-AB69_RS29255;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=pseudogene;locus_tag=AB69_RS29255;pseudo=true NZ_JHDO01000074.1 Protein Homology CDS 2604 2840 . + 0 ID=cds-AB69_RS29255;Parent=gene-AB69_RS29255;Note=internal stop;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AB69_RS29255;product=regulatory protein YcgZ;pseudo=true;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 2883 3155 . + . ID=gene-AB69_RS0123875;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AB69_RS0123875 NZ_JHDO01000074.1 Protein Homology CDS 2883 3155 . + 0 ID=cds-WP_000858002.1;Parent=gene-AB69_RS0123875;Dbxref=GenBank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AB69_RS0123875;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 3184 3450 . + . ID=gene-AB69_RS0123880;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AB69_RS0123880 NZ_JHDO01000074.1 Protein Homology CDS 3184 3450 . + 0 ID=cds-WP_000888772.1;Parent=gene-AB69_RS0123880;Dbxref=GenBank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AB69_RS0123880;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 3563 3811 . + . ID=gene-AB69_RS0123885;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AB69_RS0123885;old_locus_tag=AB69_1221 NZ_JHDO01000074.1 Protein Homology CDS 3563 3811 . + 0 ID=cds-WP_001065752.1;Parent=gene-AB69_RS0123885;Dbxref=GenBank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AB69_RS0123885;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 4143 5666 . + . ID=gene-AB69_RS0123890;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=AB69_RS0123890 NZ_JHDO01000074.1 Protein Homology CDS 4143 5666 . + 0 ID=cds-WP_032231010.1;Parent=gene-AB69_RS0123890;Dbxref=GenBank:WP_032231010.1;Name=WP_032231010.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AB69_RS0123890;product=EAL domain-containing protein;protein_id=WP_032231010.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 5798 6016 . + . ID=gene-AB69_RS16295;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AB69_RS16295;old_locus_tag=AB69_1223 NZ_JHDO01000074.1 Protein Homology CDS 5798 6016 . + 0 ID=cds-WP_001065861.1;Parent=gene-AB69_RS16295;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AB69_RS16295;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JHDO01000074.1 RefSeq pseudogene 6416 9064 . + . ID=gene-AB69_RS29730;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AB69_RS29730;pseudo=true NZ_JHDO01000074.1 Protein Homology CDS 6416 9064 . + 0 ID=cds-AB69_RS29730;Parent=gene-AB69_RS29730;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AB69_RS29730;product=autotransporter YcgH;pseudo=true;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 9121 9456 . - . ID=gene-AB69_RS16285;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AB69_RS16285;old_locus_tag=AB69_1227 NZ_JHDO01000074.1 Protein Homology CDS 9121 9456 . - 0 ID=cds-WP_000979977.1;Parent=gene-AB69_RS16285;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AB69_RS16285;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 9460 9804 . - . ID=gene-AB69_RS16280;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AB69_RS16280;old_locus_tag=AB69_1228 NZ_JHDO01000074.1 Protein Homology CDS 9460 9804 . - 0 ID=cds-WP_000726974.1;Parent=gene-AB69_RS16280;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AB69_RS16280;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 9806 9979 . - . ID=gene-AB69_RS0123905;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AB69_RS0123905 NZ_JHDO01000074.1 Protein Homology CDS 9806 9979 . - 0 ID=cds-WP_000122462.1;Parent=gene-AB69_RS0123905;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AB69_RS0123905;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 10080 10265 . + . ID=gene-AB69_RS26705;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AB69_RS26705 NZ_JHDO01000074.1 Protein Homology CDS 10080 10265 . + 0 ID=cds-WP_001325005.1;Parent=gene-AB69_RS26705;Dbxref=GenBank:WP_001325005.1;Name=WP_001325005.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AB69_RS26705;product=protein YmgJ;protein_id=WP_001325005.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 10226 10345 . + . ID=gene-AB69_RS29735;Name=AB69_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29735;old_locus_tag=AB69_1229 NZ_JHDO01000074.1 Protein Homology CDS 10226 10345 . + 0 ID=cds-WP_001131446.1;Parent=gene-AB69_RS29735;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AB69_RS29735;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JHDO01000074.1 RefSeq pseudogene 10380 10723 . + . ID=gene-AB69_RS28500;Name=AB69_RS28500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28500;partial=true;pseudo=true;start_range=.,10380 NZ_JHDO01000074.1 Protein Homology CDS 10380 10723 . + 0 ID=cds-AB69_RS28500;Parent=gene-AB69_RS28500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AB69_RS28500;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,10380;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 11095 11361 . - . ID=gene-AB69_RS16270;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AB69_RS16270;old_locus_tag=AB69_1231 NZ_JHDO01000074.1 Protein Homology CDS 11095 11361 . - 0 ID=cds-WP_001185665.1;Parent=gene-AB69_RS16270;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AB69_RS16270;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 11365 12177 . - . ID=gene-AB69_RS16265;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AB69_RS16265;old_locus_tag=AB69_1232 NZ_JHDO01000074.1 Protein Homology CDS 11365 12177 . - 0 ID=cds-WP_000101055.1;Parent=gene-AB69_RS16265;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AB69_RS16265;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 12201 12896 . - . ID=gene-AB69_RS16260;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AB69_RS16260;old_locus_tag=AB69_1233 NZ_JHDO01000074.1 Protein Homology CDS 12201 12896 . - 0 ID=cds-WP_000072536.1;Parent=gene-AB69_RS16260;Dbxref=GenBank:WP_000072536.1;Name=WP_000072536.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AB69_RS16260;product=septum site-determining protein MinC;protein_id=WP_000072536.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 13416 13784 . + . ID=gene-AB69_RS16255;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AB69_RS16255;old_locus_tag=AB69_1234 NZ_JHDO01000074.1 Protein Homology CDS 13416 13784 . + 0 ID=cds-WP_001056840.1;Parent=gene-AB69_RS16255;Dbxref=GenBank:WP_001056840.1;Name=WP_001056840.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AB69_RS16255;product=YcgJ family protein;protein_id=WP_001056840.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 13887 14288 . - . ID=gene-AB69_RS16250;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AB69_RS16250;old_locus_tag=AB69_1235 NZ_JHDO01000074.1 Protein Homology CDS 13887 14288 . - 0 ID=cds-WP_000695215.1;Parent=gene-AB69_RS16250;Dbxref=GenBank:WP_000695215.1;Name=WP_000695215.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415696.1;locus_tag=AB69_RS16250;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695215.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 14530 14823 . + . ID=gene-AB69_RS16245;Name=AB69_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16245;old_locus_tag=AB69_1237 NZ_JHDO01000074.1 Protein Homology CDS 14530 14823 . + 0 ID=cds-WP_001295992.1;Parent=gene-AB69_RS16245;Dbxref=GenBank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AB69_RS16245;product=YcgL domain-containing protein;protein_id=WP_001295992.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 14895 15554 . + . ID=gene-AB69_RS16240;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AB69_RS16240;old_locus_tag=AB69_1238 NZ_JHDO01000074.1 Protein Homology CDS 14895 15554 . + 0 ID=cds-WP_000284280.1;Parent=gene-AB69_RS16240;Dbxref=GenBank:WP_000284280.1;Name=WP_000284280.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415698.1;locus_tag=AB69_RS16240;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284280.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 15646 16092 . + . ID=gene-AB69_RS16235;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AB69_RS16235;old_locus_tag=AB69_1239 NZ_JHDO01000074.1 Protein Homology CDS 15646 16092 . + 0 ID=cds-WP_001306825.1;Parent=gene-AB69_RS16235;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AB69_RS16235;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 16299 17198 . - . ID=gene-AB69_RS16230;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=AB69_RS16230;old_locus_tag=AB69_1240 NZ_JHDO01000074.1 Protein Homology CDS 16299 17198 . - 0 ID=cds-WP_032231023.1;Parent=gene-AB69_RS16230;Dbxref=GenBank:WP_032231023.1;Name=WP_032231023.1;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AB69_RS16230;product=hemolysin HlyE;protein_id=WP_032231023.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 17571 17990 . + . ID=gene-AB69_RS16225;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AB69_RS16225;old_locus_tag=AB69_1241 NZ_JHDO01000074.1 Protein Homology CDS 17571 17990 . + 0 ID=cds-WP_000897378.1;Parent=gene-AB69_RS16225;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AB69_RS16225;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 17990 19258 . + . ID=gene-AB69_RS16220;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AB69_RS16220;old_locus_tag=AB69_1242 NZ_JHDO01000074.1 Protein Homology CDS 17990 19258 . + 0 ID=cds-WP_000457616.1;Parent=gene-AB69_RS16220;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AB69_RS16220;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 19304 19834 . - . ID=gene-AB69_RS16215;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AB69_RS16215;old_locus_tag=AB69_1243 NZ_JHDO01000074.1 Protein Homology CDS 19304 19834 . - 0 ID=cds-WP_000943459.1;Parent=gene-AB69_RS16215;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AB69_RS16215;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 19980 21521 . - . ID=gene-AB69_RS16210;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AB69_RS16210;old_locus_tag=AB69_1244 NZ_JHDO01000074.1 Protein Homology CDS 19980 21521 . - 0 ID=cds-WP_000406391.1;Parent=gene-AB69_RS16210;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AB69_RS16210;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 21742 22461 . + . ID=gene-AB69_RS16205;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AB69_RS16205;old_locus_tag=AB69_1245 NZ_JHDO01000074.1 Protein Homology CDS 21742 22461 . + 0 ID=cds-WP_000234823.1;Parent=gene-AB69_RS16205;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AB69_RS16205;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 22513 24045 . - . ID=gene-AB69_RS16200;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AB69_RS16200;old_locus_tag=AB69_1246 NZ_JHDO01000074.1 Protein Homology CDS 22513 24045 . - 0 ID=cds-WP_000190854.1;Parent=gene-AB69_RS16200;Dbxref=GenBank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AB69_RS16200;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 24375 25673 . + . ID=gene-AB69_RS16195;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AB69_RS16195;old_locus_tag=AB69_1247 NZ_JHDO01000074.1 Protein Homology CDS 24375 25673 . + 0 ID=cds-WP_032231014.1;Parent=gene-AB69_RS16195;Dbxref=GenBank:WP_032231014.1;Name=WP_032231014.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AB69_RS16195;product=D-amino acid dehydrogenase;protein_id=WP_032231014.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 25683 26753 . + . ID=gene-AB69_RS16190;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AB69_RS16190;old_locus_tag=AB69_1248 NZ_JHDO01000074.1 Protein Homology CDS 25683 26753 . + 0 ID=cds-WP_000197881.1;Parent=gene-AB69_RS16190;Dbxref=GenBank:WP_000197881.1;Name=WP_000197881.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AB69_RS16190;product=catabolic alanine racemase DadX;protein_id=WP_000197881.1;transl_table=11 NZ_JHDO01000074.1 RefSeq pseudogene 27064 27204 . + . ID=gene-AB69_RS30810;Name=AB69_RS30810;end_range=27204,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30810;partial=true;pseudo=true NZ_JHDO01000074.1 Protein Homology CDS 27064 27204 . + 0 ID=cds-AB69_RS30810;Parent=gene-AB69_RS30810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27204,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AB69_RS30810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 27139 28875 . - . ID=gene-AB69_RS16185;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AB69_RS16185;old_locus_tag=AB69_1250 NZ_JHDO01000074.1 Protein Homology CDS 27139 28875 . - 0 ID=cds-WP_000340194.1;Parent=gene-AB69_RS16185;Dbxref=GenBank:WP_000340194.1;Name=WP_000340194.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AB69_RS16185;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 28970 29884 . - . ID=gene-AB69_RS16180;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AB69_RS16180;old_locus_tag=AB69_1251 NZ_JHDO01000074.1 Protein Homology CDS 28970 29884 . - 0 ID=cds-WP_000051560.1;Parent=gene-AB69_RS16180;Dbxref=GenBank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AB69_RS16180;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 29984 30595 . + . ID=gene-AB69_RS16175;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AB69_RS16175;old_locus_tag=AB69_1252 NZ_JHDO01000074.1 Protein Homology CDS 29984 30595 . + 0 ID=cds-WP_001301104.1;Parent=gene-AB69_RS16175;Dbxref=GenBank:WP_001301104.1;Name=WP_001301104.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AB69_RS16175;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001301104.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 30597 31331 . - . ID=gene-AB69_RS16170;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AB69_RS16170;old_locus_tag=AB69_1253 NZ_JHDO01000074.1 Protein Homology CDS 30597 31331 . - 0 ID=cds-WP_000020169.1;Parent=gene-AB69_RS16170;Dbxref=GenBank:WP_000020169.1;Name=WP_000020169.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AB69_RS16170;product=flagellar brake protein YcgR;protein_id=WP_000020169.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 31532 31786 . + . ID=gene-AB69_RS16165;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AB69_RS16165;old_locus_tag=AB69_1254 NZ_JHDO01000074.1 Protein Homology CDS 31532 31786 . + 0 ID=cds-WP_001310727.1;Parent=gene-AB69_RS16165;Dbxref=GenBank:WP_001310727.1;Name=WP_001310727.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415713.1;locus_tag=AB69_RS16165;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_001310727.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 31964 32404 . + . ID=gene-AB69_RS16160;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AB69_RS16160;old_locus_tag=AB69_1255 NZ_JHDO01000074.1 Protein Homology CDS 31964 32404 . + 0 ID=cds-WP_000615067.1;Parent=gene-AB69_RS16160;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AB69_RS16160;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 32483 34180 . - . ID=gene-AB69_RS16155;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AB69_RS16155;old_locus_tag=AB69_1256 NZ_JHDO01000074.1 Protein Homology CDS 32483 34180 . - 0 ID=cds-WP_000841714.1;Parent=gene-AB69_RS16155;Dbxref=GenBank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AB69_RS16155;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 34500 35918 . - . ID=gene-AB69_RS16150;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AB69_RS16150;old_locus_tag=AB69_1258 NZ_JHDO01000074.1 Protein Homology CDS 34500 35918 . - 0 ID=cds-WP_001301101.1;Parent=gene-AB69_RS16150;Dbxref=GenBank:WP_001301101.1;Name=WP_001301101.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AB69_RS16150;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001301101.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 35929 36561 . - . ID=gene-AB69_RS16145;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AB69_RS16145;old_locus_tag=AB69_1259 NZ_JHDO01000074.1 Protein Homology CDS 35929 36561 . - 0 ID=cds-WP_000059411.1;Parent=gene-AB69_RS16145;Dbxref=GenBank:WP_000059411.1;Name=WP_000059411.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AB69_RS16145;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 36572 37642 . - . ID=gene-AB69_RS16140;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AB69_RS16140;old_locus_tag=AB69_1260 NZ_JHDO01000074.1 Protein Homology CDS 36572 37642 . - 0 ID=cds-WP_000733715.1;Parent=gene-AB69_RS16140;Dbxref=GenBank:WP_000733715.1;Name=WP_000733715.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AB69_RS16140;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 37870 39789 . + . ID=gene-AB69_RS16135;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AB69_RS16135;old_locus_tag=AB69_1261 NZ_JHDO01000074.1 Protein Homology CDS 37870 39789 . + 0 ID=cds-WP_032231015.1;Parent=gene-AB69_RS16135;Dbxref=GenBank:WP_032231015.1;Name=WP_032231015.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AB69_RS16135;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_032231015.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 39889 42756 . - . ID=gene-AB69_RS16130;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;locus_tag=AB69_RS16130;old_locus_tag=AB69_1262 NZ_JHDO01000074.1 Protein Homology CDS 39889 42756 . - 0 ID=cds-WP_001334788.1;Parent=gene-AB69_RS16130;Dbxref=GenBank:WP_001334788.1;Name=WP_001334788.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AB69_RS16130;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001334788.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 43525 44616 . - . ID=gene-AB69_RS16120;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AB69_RS16120;old_locus_tag=AB69_1264 NZ_JHDO01000074.1 Protein Homology CDS 43525 44616 . - 0 ID=cds-WP_000505866.1;Parent=gene-AB69_RS16120;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AB69_RS16120;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 44733 45317 . - . ID=gene-AB69_RS16115;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AB69_RS16115;old_locus_tag=AB69_1265 NZ_JHDO01000074.1 Protein Homology CDS 44733 45317 . - 0 ID=cds-WP_000152933.1;Parent=gene-AB69_RS16115;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AB69_RS16115;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 45595 45873 . + . ID=gene-AB69_RS16110;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AB69_RS16110;old_locus_tag=AB69_1266 NZ_JHDO01000074.1 Protein Homology CDS 45595 45873 . + 0 ID=cds-WP_000823885.1;Parent=gene-AB69_RS16110;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AB69_RS16110;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 45928 47607 . - . ID=gene-AB69_RS16105;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AB69_RS16105;old_locus_tag=AB69_1267 NZ_JHDO01000074.1 Protein Homology CDS 45928 47607 . - 0 ID=cds-WP_001033352.1;Parent=gene-AB69_RS16105;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AB69_RS16105;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 47732 48679 . - . ID=gene-AB69_RS16100;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AB69_RS16100;old_locus_tag=AB69_1268 NZ_JHDO01000074.1 Protein Homology CDS 47732 48679 . - 0 ID=cds-WP_001298109.1;Parent=gene-AB69_RS16100;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AB69_RS16100;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 48830 49681 . - . ID=gene-AB69_RS16095;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AB69_RS16095;old_locus_tag=AB69_1269 NZ_JHDO01000074.1 Protein Homology CDS 48830 49681 . - 0 ID=cds-WP_001260332.1;Parent=gene-AB69_RS16095;Dbxref=GenBank:WP_001260332.1;Name=WP_001260332.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309740.1;locus_tag=AB69_RS16095;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260332.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 49681 50304 . - . ID=gene-AB69_RS16090;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AB69_RS16090;old_locus_tag=AB69_1270 NZ_JHDO01000074.1 Protein Homology CDS 49681 50304 . - 0 ID=cds-WP_001130692.1;Parent=gene-AB69_RS16090;Dbxref=GenBank:WP_001130692.1;Name=WP_001130692.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AB69_RS16090;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130692.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 50518 51774 . + . ID=gene-AB69_RS16085;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AB69_RS16085;old_locus_tag=AB69_1271 NZ_JHDO01000074.1 Protein Homology CDS 50518 51774 . + 0 ID=cds-WP_001299679.1;Parent=gene-AB69_RS16085;Dbxref=GenBank:WP_001299679.1;Name=WP_001299679.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AB69_RS16085;product=glutamyl-tRNA reductase;protein_id=WP_001299679.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 51816 52898 . + . ID=gene-AB69_RS16080;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AB69_RS16080;old_locus_tag=AB69_1272 NZ_JHDO01000074.1 Protein Homology CDS 51816 52898 . + 0 ID=cds-WP_000804726.1;Parent=gene-AB69_RS16080;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AB69_RS16080;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 52898 53731 . + . ID=gene-AB69_RS16075;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AB69_RS16075;old_locus_tag=AB69_1273 NZ_JHDO01000074.1 Protein Homology CDS 52898 53731 . + 0 ID=cds-WP_000456467.1;Parent=gene-AB69_RS16075;Dbxref=GenBank:WP_000456467.1;Name=WP_000456467.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=AB69_RS16075;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456467.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 53728 54120 . + . ID=gene-AB69_RS16070;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AB69_RS16070;old_locus_tag=AB69_1274 NZ_JHDO01000074.1 Protein Homology CDS 53728 54120 . + 0 ID=cds-WP_032231017.1;Parent=gene-AB69_RS16070;Dbxref=GenBank:WP_032231017.1;Name=WP_032231017.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AB69_RS16070;product=invasion regulator SirB2;protein_id=WP_032231017.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 54124 54933 . + . ID=gene-AB69_RS16065;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AB69_RS16065;old_locus_tag=AB69_1275 NZ_JHDO01000074.1 Protein Homology CDS 54124 54933 . + 0 ID=cds-WP_001257044.1;Parent=gene-AB69_RS16065;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AB69_RS16065;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 54969 55823 . + . ID=gene-AB69_RS16060;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AB69_RS16060;old_locus_tag=AB69_1276 NZ_JHDO01000074.1 Protein Homology CDS 54969 55823 . + 0 ID=cds-WP_000811065.1;Parent=gene-AB69_RS16060;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AB69_RS16060;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JHDO01000074.1 RefSeq gene 55972 56079 . - . ID=gene-AB69_RS16055;Name=ldrA;gbkey=Gene;gene=ldrA;gene_biotype=protein_coding;locus_tag=AB69_RS16055;old_locus_tag=AB69_1277 NZ_JHDO01000074.1 Protein Homology CDS 55972 56079 . - 0 ID=cds-WP_000170955.1;Parent=gene-AB69_RS16055;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;gene=ldrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AB69_RS16055;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 ##sequence-region NZ_JHDO01000075.1 1 52576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000075.1 RefSeq region 1 52576 . + . ID=NZ_JHDO01000075.1:1..52576;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000075.1 RefSeq gene 432 539 . - . ID=gene-AB69_RS16050;Name=AB69_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS16050;old_locus_tag=AB69_1278 NZ_JHDO01000075.1 Protein Homology CDS 432 539 . - 0 ID=cds-WP_000170954.1;Parent=gene-AB69_RS16050;Dbxref=GenBank:WP_000170954.1;Name=WP_000170954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=AB69_RS16050;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170954.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 943 2043 . - . ID=gene-AB69_RS16045;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AB69_RS16045;old_locus_tag=AB69_1279 NZ_JHDO01000075.1 Protein Homology CDS 943 2043 . - 0 ID=cds-WP_000063607.1;Parent=gene-AB69_RS16045;Dbxref=GenBank:WP_000063607.1;Name=WP_000063607.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415734.1;locus_tag=AB69_RS16045;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000063607.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 2313 2543 . + . ID=gene-AB69_RS16040;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AB69_RS16040;old_locus_tag=AB69_1280 NZ_JHDO01000075.1 Protein Homology CDS 2313 2543 . + 0 ID=cds-WP_001146444.1;Parent=gene-AB69_RS16040;Dbxref=GenBank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AB69_RS16040;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 2701 3396 . + . ID=gene-AB69_RS16035;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AB69_RS16035;old_locus_tag=AB69_1281 NZ_JHDO01000075.1 Protein Homology CDS 2701 3396 . + 0 ID=cds-WP_001336325.1;Parent=gene-AB69_RS16035;Dbxref=GenBank:WP_001336325.1;Name=WP_001336325.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AB69_RS16035;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001336325.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 3440 3793 . - . ID=gene-AB69_RS16030;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AB69_RS16030;old_locus_tag=AB69_1282 NZ_JHDO01000075.1 Protein Homology CDS 3440 3793 . - 0 ID=cds-WP_001169669.1;Parent=gene-AB69_RS16030;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AB69_RS16030;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 3978 5372 . + . ID=gene-AB69_RS16025;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AB69_RS16025;old_locus_tag=AB69_1283 NZ_JHDO01000075.1 Protein Homology CDS 3978 5372 . + 0 ID=cds-WP_000086217.1;Parent=gene-AB69_RS16025;Dbxref=GenBank:WP_000086217.1;Name=WP_000086217.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AB69_RS16025;product=inverse autotransporter invasin YchO;protein_id=WP_000086217.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 5373 6023 . - . ID=gene-AB69_RS16020;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AB69_RS16020;old_locus_tag=AB69_1284 NZ_JHDO01000075.1 Protein Homology CDS 5373 6023 . - 0 ID=cds-WP_000070491.1;Parent=gene-AB69_RS16020;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AB69_RS16020;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 6016 7812 . - . ID=gene-AB69_RS16015;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AB69_RS16015;old_locus_tag=AB69_1285 NZ_JHDO01000075.1 Protein Homology CDS 6016 7812 . - 0 ID=cds-WP_000918073.1;Parent=gene-AB69_RS16015;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AB69_RS16015;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 8151 9542 . + . ID=gene-AB69_RS16005;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AB69_RS16005;old_locus_tag=AB69_1287 NZ_JHDO01000075.1 Protein Homology CDS 8151 9542 . + 0 ID=cds-WP_000019827.1;Parent=gene-AB69_RS16005;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AB69_RS16005;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 10058 13801 . + . ID=gene-AB69_RS16000;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AB69_RS16000;old_locus_tag=AB69_1288 NZ_JHDO01000075.1 Protein Homology CDS 10058 13801 . + 0 ID=cds-WP_000032939.1;Parent=gene-AB69_RS16000;Dbxref=GenBank:WP_000032939.1;Name=WP_000032939.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415742.1;locus_tag=AB69_RS16000;product=nitrate reductase subunit alpha;protein_id=WP_000032939.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 13798 15336 . + . ID=gene-AB69_RS15995;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB69_RS15995;old_locus_tag=AB69_1289 NZ_JHDO01000075.1 Protein Homology CDS 13798 15336 . + 0 ID=cds-WP_000702650.1;Parent=gene-AB69_RS15995;Dbxref=GenBank:WP_000702650.1;Name=WP_000702650.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415743.1;locus_tag=AB69_RS15995;product=nitrate reductase subunit beta;protein_id=WP_000702650.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 15333 16043 . + . ID=gene-AB69_RS15990;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AB69_RS15990;old_locus_tag=AB69_1290 NZ_JHDO01000075.1 Protein Homology CDS 15333 16043 . + 0 ID=cds-WP_000571681.1-2;Parent=gene-AB69_RS15990;Dbxref=GenBank:WP_000571681.1;Name=WP_000571681.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AB69_RS15990;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571681.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 16043 16720 . + . ID=gene-AB69_RS15985;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB69_RS15985;old_locus_tag=AB69_1291 NZ_JHDO01000075.1 Protein Homology CDS 16043 16720 . + 0 ID=cds-WP_001160110.1-2;Parent=gene-AB69_RS15985;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AB69_RS15985;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 16904 17035 . - . ID=gene-AB69_RS25605;Name=AB69_RS25605;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25605 NZ_JHDO01000075.1 cmsearch ncRNA 16904 17035 . - . ID=rna-AB69_RS25605;Parent=gene-AB69_RS25605;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25605;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 16904 17035 . - . ID=exon-AB69_RS25605-1;Parent=rna-AB69_RS25605;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25605;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 17082 17213 . - . ID=gene-AB69_RS25610;Name=AB69_RS25610;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25610 NZ_JHDO01000075.1 cmsearch ncRNA 17082 17213 . - . ID=rna-AB69_RS25610;Parent=gene-AB69_RS25610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25610;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 17082 17213 . - . ID=exon-AB69_RS25610-1;Parent=rna-AB69_RS25610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25610;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 17260 17391 . - . ID=gene-AB69_RS25615;Name=AB69_RS25615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25615 NZ_JHDO01000075.1 cmsearch ncRNA 17260 17391 . - . ID=rna-AB69_RS25615;Parent=gene-AB69_RS25615;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25615;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 17260 17391 . - . ID=exon-AB69_RS25615-1;Parent=rna-AB69_RS25615;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25615;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 17438 17569 . - . ID=gene-AB69_RS25620;Name=AB69_RS25620;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25620 NZ_JHDO01000075.1 cmsearch ncRNA 17438 17569 . - . ID=rna-AB69_RS25620;Parent=gene-AB69_RS25620;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25620;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 17438 17569 . - . ID=exon-AB69_RS25620-1;Parent=rna-AB69_RS25620;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25620;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 17616 17700 . - . ID=gene-AB69_RS15980;Name=AB69_RS15980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15980;old_locus_tag=AB69_1293 NZ_JHDO01000075.1 tRNAscan-SE tRNA 17616 17700 . - . ID=rna-AB69_RS15980;Parent=gene-AB69_RS15980;anticodon=(pos:complement(17664..17666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15980;product=tRNA-Tyr NZ_JHDO01000075.1 tRNAscan-SE exon 17616 17700 . - . ID=exon-AB69_RS15980-1;Parent=rna-AB69_RS15980;anticodon=(pos:complement(17664..17666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15980;product=tRNA-Tyr NZ_JHDO01000075.1 RefSeq gene 17735 17866 . - . ID=gene-AB69_RS25625;Name=AB69_RS25625;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25625 NZ_JHDO01000075.1 cmsearch ncRNA 17735 17866 . - . ID=rna-AB69_RS25625;Parent=gene-AB69_RS25625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25625;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 17735 17866 . - . ID=exon-AB69_RS25625-1;Parent=rna-AB69_RS25625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25625;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 17910 17994 . - . ID=gene-AB69_RS15975;Name=AB69_RS15975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15975;old_locus_tag=AB69_1294 NZ_JHDO01000075.1 tRNAscan-SE tRNA 17910 17994 . - . ID=rna-AB69_RS15975;Parent=gene-AB69_RS15975;anticodon=(pos:complement(17958..17960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15975;product=tRNA-Tyr NZ_JHDO01000075.1 tRNAscan-SE exon 17910 17994 . - . ID=exon-AB69_RS15975-1;Parent=rna-AB69_RS15975;anticodon=(pos:complement(17958..17960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15975;product=tRNA-Tyr NZ_JHDO01000075.1 RefSeq gene 18029 18160 . - . ID=gene-AB69_RS25630;Name=AB69_RS25630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25630 NZ_JHDO01000075.1 cmsearch ncRNA 18029 18160 . - . ID=rna-AB69_RS25630;Parent=gene-AB69_RS25630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25630;product=RtT sRNA NZ_JHDO01000075.1 cmsearch exon 18029 18160 . - . ID=exon-AB69_RS25630-1;Parent=rna-AB69_RS25630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25630;product=RtT sRNA NZ_JHDO01000075.1 RefSeq gene 18204 18288 . - . ID=gene-AB69_RS15970;Name=AB69_RS15970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15970;old_locus_tag=AB69_1295 NZ_JHDO01000075.1 tRNAscan-SE tRNA 18204 18288 . - . ID=rna-AB69_RS15970;Parent=gene-AB69_RS15970;anticodon=(pos:complement(18252..18254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15970;product=tRNA-Tyr NZ_JHDO01000075.1 tRNAscan-SE exon 18204 18288 . - . ID=exon-AB69_RS15970-1;Parent=rna-AB69_RS15970;anticodon=(pos:complement(18252..18254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15970;product=tRNA-Tyr NZ_JHDO01000075.1 RefSeq gene 18448 19290 . - . ID=gene-AB69_RS15965;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AB69_RS15965;old_locus_tag=AB69_1296 NZ_JHDO01000075.1 Protein Homology CDS 18448 19290 . - 0 ID=cds-WP_000555857.1-2;Parent=gene-AB69_RS15965;Dbxref=GenBank:WP_000555857.1;Name=WP_000555857.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AB69_RS15965;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 19340 19798 . - . ID=gene-AB69_RS0123920;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AB69_RS0123920;old_locus_tag=AB69_1297 NZ_JHDO01000075.1 Protein Homology CDS 19340 19798 . - 0 ID=cds-WP_001307143.1-2;Parent=gene-AB69_RS0123920;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AB69_RS0123920;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 19911 20816 . + . ID=gene-AB69_RS15960;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AB69_RS15960;old_locus_tag=AB69_1298 NZ_JHDO01000075.1 Protein Homology CDS 19911 20816 . + 0 ID=cds-WP_001295622.1;Parent=gene-AB69_RS15960;Dbxref=GenBank:WP_001295622.1;Name=WP_001295622.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AB69_RS15960;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 20908 21921 . + . ID=gene-AB69_RS15955;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AB69_RS15955;old_locus_tag=AB69_1299 NZ_JHDO01000075.1 Protein Homology CDS 20908 21921 . + 0 ID=cds-WP_000193447.1;Parent=gene-AB69_RS15955;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AB69_RS15955;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 22123 23031 . + . ID=gene-AB69_RS15950;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AB69_RS15950;old_locus_tag=AB69_1300 NZ_JHDO01000075.1 Protein Homology CDS 22123 23031 . + 0 ID=cds-WP_000718995.1;Parent=gene-AB69_RS15950;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AB69_RS15950;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 23175 23588 . - . ID=gene-AB69_RS15945;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AB69_RS15945;old_locus_tag=AB69_1301 NZ_JHDO01000075.1 Protein Homology CDS 23175 23588 . - 0 ID=cds-WP_001287378.1;Parent=gene-AB69_RS15945;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AB69_RS15945;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 24193 24810 . + . ID=gene-AB69_RS15940;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AB69_RS15940;old_locus_tag=AB69_1302 NZ_JHDO01000075.1 Protein Homology CDS 24193 24810 . + 0 ID=cds-WP_000068077.1;Parent=gene-AB69_RS15940;Dbxref=GenBank:WP_000068077.1;Name=WP_000068077.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415754.1;locus_tag=AB69_RS15940;product=thymidine kinase;protein_id=WP_000068077.1;transl_table=11 NZ_JHDO01000075.1 RefSeq pseudogene 25092 25988 . - . ID=gene-AB69_RS15935;Name=AB69_RS15935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15935;old_locus_tag=AB69_1303;pseudo=true NZ_JHDO01000075.1 Protein Homology CDS 25092 25988 . - 0 ID=cds-AB69_RS15935;Parent=gene-AB69_RS15935;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AB69_RS15935;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 26112 28787 . - . ID=gene-AB69_RS15930;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AB69_RS15930;old_locus_tag=AB69_1306 NZ_JHDO01000075.1 Protein Homology CDS 26112 28787 . - 0 ID=cds-WP_000301651.1;Parent=gene-AB69_RS15930;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AB69_RS15930;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 29180 29233 . + . ID=gene-AB69_RS30215;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB69_RS30215 NZ_JHDO01000075.1 Protein Homology CDS 29180 29233 . + 0 ID=cds-WP_211180492.1;Parent=gene-AB69_RS30215;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AB69_RS30215;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 29264 29911 . + . ID=gene-AB69_RS15925;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB69_RS15925;old_locus_tag=AB69_1307 NZ_JHDO01000075.1 Protein Homology CDS 29264 29911 . + 0 ID=cds-WP_000616554.1;Parent=gene-AB69_RS15925;Dbxref=GenBank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AB69_RS15925;product=NAAT family transporter YchE;protein_id=WP_000616554.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 30069 30365 . - . ID=gene-AB69_RS29740;Name=AB69_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29740 NZ_JHDO01000075.1 GeneMarkS-2+ CDS 30069 30365 . - 0 ID=cds-WP_001211521.1;Parent=gene-AB69_RS29740;Dbxref=GenBank:WP_001211521.1;Name=WP_001211521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29740;product=hypothetical protein;protein_id=WP_001211521.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 30649 32280 . + . ID=gene-AB69_RS15920;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AB69_RS15920;old_locus_tag=AB69_1309 NZ_JHDO01000075.1 Protein Homology CDS 30649 32280 . + 0 ID=cds-WP_032231029.1;Parent=gene-AB69_RS15920;Dbxref=GenBank:WP_032231029.1;Name=WP_032231029.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AB69_RS15920;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_032231029.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 32366 33286 . + . ID=gene-AB69_RS15915;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AB69_RS15915;old_locus_tag=AB69_1310 NZ_JHDO01000075.1 Protein Homology CDS 32366 33286 . + 0 ID=cds-WP_000911112.1;Parent=gene-AB69_RS15915;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AB69_RS15915;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 33301 34209 . + . ID=gene-AB69_RS15910;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AB69_RS15910;old_locus_tag=AB69_1311 NZ_JHDO01000075.1 Protein Homology CDS 33301 34209 . + 0 ID=cds-WP_000979661.1;Parent=gene-AB69_RS15910;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AB69_RS15910;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 34221 35234 . + . ID=gene-AB69_RS15905;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AB69_RS15905;old_locus_tag=AB69_1312 NZ_JHDO01000075.1 Protein Homology CDS 34221 35234 . + 0 ID=cds-WP_000110945.1;Parent=gene-AB69_RS15905;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AB69_RS15905;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 35231 36235 . + . ID=gene-AB69_RS15900;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AB69_RS15900;old_locus_tag=AB69_1313 NZ_JHDO01000075.1 Protein Homology CDS 35231 36235 . + 0 ID=cds-WP_000994905.1;Parent=gene-AB69_RS15900;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AB69_RS15900;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 36288 36617 . - . ID=gene-AB69_RS15895;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AB69_RS15895;old_locus_tag=AB69_1314 NZ_JHDO01000075.1 Protein Homology CDS 36288 36617 . - 0 ID=cds-WP_000366959.1;Parent=gene-AB69_RS15895;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AB69_RS15895;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 36652 38112 . - . ID=gene-AB69_RS15890;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AB69_RS15890;old_locus_tag=AB69_1315 NZ_JHDO01000075.1 Protein Homology CDS 36652 38112 . - 0 ID=cds-WP_000214516.1;Parent=gene-AB69_RS15890;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AB69_RS15890;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 38255 38428 . + . ID=gene-AB69_RS29745;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AB69_RS29745 NZ_JHDO01000075.1 Protein Homology CDS 38255 38428 . + 0 ID=cds-WP_001309467.1;Parent=gene-AB69_RS29745;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AB69_RS29745;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 38483 39736 . - . ID=gene-AB69_RS15885;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AB69_RS15885;old_locus_tag=AB69_1316 NZ_JHDO01000075.1 Protein Homology CDS 38483 39736 . - 0 ID=cds-WP_001295624.1;Parent=gene-AB69_RS15885;Dbxref=GenBank:WP_001295624.1;Name=WP_001295624.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415766.1;locus_tag=AB69_RS15885;product=voltage-gated potassium channel protein;protein_id=WP_001295624.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 40036 40332 . - . ID=gene-AB69_RS15880;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AB69_RS15880;old_locus_tag=AB69_1317 NZ_JHDO01000075.1 Protein Homology CDS 40036 40332 . - 0 ID=cds-WP_000967595.1;Parent=gene-AB69_RS15880;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AB69_RS15880;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 40556 41275 . + . ID=gene-AB69_RS15875;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AB69_RS15875;old_locus_tag=AB69_1318 NZ_JHDO01000075.1 Protein Homology CDS 40556 41275 . + 0 ID=cds-WP_001360141.1;Parent=gene-AB69_RS15875;Dbxref=GenBank:WP_001360141.1;Name=WP_001360141.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AB69_RS15875;product=TonB system transport protein TonB;protein_id=WP_001360141.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 41315 41713 . - . ID=gene-AB69_RS15870;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AB69_RS15870;old_locus_tag=AB69_1319 NZ_JHDO01000075.1 Protein Homology CDS 41315 41713 . - 0 ID=cds-WP_000108160.1;Parent=gene-AB69_RS15870;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AB69_RS15870;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 41818 42357 . - . ID=gene-AB69_RS15865;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AB69_RS15865;old_locus_tag=AB69_1320 NZ_JHDO01000075.1 Protein Homology CDS 41818 42357 . - 0 ID=cds-WP_000808667.1;Parent=gene-AB69_RS15865;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AB69_RS15865;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 42387 43130 . - . ID=gene-AB69_RS15860;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AB69_RS15860;old_locus_tag=AB69_1321 NZ_JHDO01000075.1 Protein Homology CDS 42387 43130 . - 0 ID=cds-WP_000028545.1;Parent=gene-AB69_RS15860;Dbxref=GenBank:WP_000028545.1;Name=WP_000028545.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AB69_RS15860;product=YciC family protein;protein_id=WP_000028545.1;transl_table=11 NZ_JHDO01000075.1 RefSeq pseudogene 43158 43247 . - . ID=gene-AB69_RS29290;Name=AB69_RS29290;end_range=43247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29290;partial=true;pseudo=true NZ_JHDO01000075.1 Protein Homology CDS 43158 43247 . - 0 ID=cds-AB69_RS29290;Parent=gene-AB69_RS29290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=43247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AB69_RS29290;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 43487 44125 . + . ID=gene-AB69_RS15855;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AB69_RS15855;old_locus_tag=AB69_1322 NZ_JHDO01000075.1 Protein Homology CDS 43487 44125 . + 0 ID=cds-WP_000737219.1;Parent=gene-AB69_RS15855;Dbxref=GenBank:WP_000737219.1;Name=WP_000737219.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AB69_RS15855;product=outer membrane protein OmpW;protein_id=WP_000737219.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 44171 45301 . - . ID=gene-AB69_RS15850;Name=AB69_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15850;old_locus_tag=AB69_1323 NZ_JHDO01000075.1 Protein Homology CDS 44171 45301 . - 0 ID=cds-WP_032231027.1;Parent=gene-AB69_RS15850;Dbxref=GenBank:WP_032231027.1;Name=WP_032231027.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AB69_RS15850;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_032231027.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 45279 45527 . - . ID=gene-AB69_RS0123935;Name=AB69_RS0123935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123935 NZ_JHDO01000075.1 Protein Homology CDS 45279 45527 . - 0 ID=cds-WP_000113189.1;Parent=gene-AB69_RS0123935;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AB69_RS0123935;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 45592 48063 . - . ID=gene-AB69_RS15845;Name=AB69_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15845;old_locus_tag=AB69_1324 NZ_JHDO01000075.1 Protein Homology CDS 45592 48063 . - 0 ID=cds-WP_032235683.1;Parent=gene-AB69_RS15845;Dbxref=GenBank:WP_032235683.1;Name=WP_032235683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AB69_RS15845;product=exonuclease;protein_id=WP_032235683.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 48143 48346 . - . ID=gene-AB69_RS15840;Name=AB69_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15840;old_locus_tag=AB69_1325 NZ_JHDO01000075.1 Protein Homology CDS 48143 48346 . - 0 ID=cds-WP_032231653.1;Parent=gene-AB69_RS15840;Dbxref=GenBank:WP_032231653.1;Name=WP_032231653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532593.1;locus_tag=AB69_RS15840;product=DUF1482 family protein;protein_id=WP_032231653.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 48343 48531 . - . ID=gene-AB69_RS0123940;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AB69_RS0123940 NZ_JHDO01000075.1 Protein Homology CDS 48343 48531 . - 0 ID=cds-WP_000450218.1;Parent=gene-AB69_RS0123940;Dbxref=GenBank:WP_000450218.1;Name=WP_000450218.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450218.1;locus_tag=AB69_RS0123940;product=cell division inhibition protein DicB;protein_id=WP_000450218.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 48542 49396 . - . ID=gene-AB69_RS15835;Name=AB69_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15835;old_locus_tag=AB69_1326 NZ_JHDO01000075.1 Protein Homology CDS 48542 49396 . - 0 ID=cds-WP_000935597.1;Parent=gene-AB69_RS15835;Dbxref=GenBank:WP_000935597.1;Name=WP_000935597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935599.1;locus_tag=AB69_RS15835;product=Rha family phage regulatory protein;protein_id=WP_000935597.1;transl_table=11 NZ_JHDO01000075.1 RefSeq pseudogene 49422 49502 . - . ID=gene-AB69_RS30815;Name=AB69_RS30815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30815;partial=true;pseudo=true;start_range=.,49422 NZ_JHDO01000075.1 Protein Homology CDS 49422 49502 . - 0 ID=cds-AB69_RS30815;Parent=gene-AB69_RS30815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001443775.1;locus_tag=AB69_RS30815;partial=true;product=cell division inhibition protein DicB;pseudo=true;start_range=.,49422;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 49644 49880 . + . ID=gene-AB69_RS26765;Name=AB69_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26765 NZ_JHDO01000075.1 Protein Homology CDS 49644 49880 . + 0 ID=cds-WP_235834889.1;Parent=gene-AB69_RS26765;Dbxref=GenBank:WP_235834889.1;Name=WP_235834889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020550.6;locus_tag=AB69_RS26765;product=DUF1883 domain-containing protein;protein_id=WP_235834889.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 49821 49970 . - . ID=gene-AB69_RS0123945;Name=AB69_RS0123945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123945;old_locus_tag=AB69_1327 NZ_JHDO01000075.1 GeneMarkS-2+ CDS 49821 49970 . - 0 ID=cds-WP_248785135.1;Parent=gene-AB69_RS0123945;Dbxref=GenBank:WP_248785135.1;Name=WP_248785135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS0123945;product=hypothetical protein;protein_id=WP_248785135.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 50403 50687 . + . ID=gene-AB69_RS0123955;Name=AB69_RS0123955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123955 NZ_JHDO01000075.1 Protein Homology CDS 50403 50687 . + 0 ID=cds-WP_001051723.1;Parent=gene-AB69_RS0123955;Dbxref=GenBank:WP_001051723.1;Name=WP_001051723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051724.1;locus_tag=AB69_RS0123955;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_001051723.1;transl_table=11 NZ_JHDO01000075.1 RefSeq pseudogene 50705 50830 . - . ID=gene-AB69_RS29955;Name=AB69_RS29955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29955;old_locus_tag=AB69_1328;partial=true;pseudo=true;start_range=.,50705 NZ_JHDO01000075.1 Protein Homology CDS 50705 50830 . - 0 ID=cds-AB69_RS29955;Parent=gene-AB69_RS29955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415662.2;locus_tag=AB69_RS29955;partial=true;product=hypothetical protein;pseudo=true;start_range=.,50705;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 50832 50987 . - . ID=gene-AB69_RS15830;Name=AB69_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15830;old_locus_tag=AB69_1329 NZ_JHDO01000075.1 Protein Homology CDS 50832 50987 . - 0 ID=cds-WP_074471882.1;Parent=gene-AB69_RS15830;Dbxref=GenBank:WP_074471882.1;Name=WP_074471882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AB69_RS15830;product=DUF1391 family protein;protein_id=WP_074471882.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 51250 51669 . - . ID=gene-AB69_RS0123960;Name=AB69_RS0123960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123960 NZ_JHDO01000075.1 Protein Homology CDS 51250 51669 . - 0 ID=cds-WP_000362153.1;Parent=gene-AB69_RS0123960;Dbxref=GenBank:WP_000362153.1;Name=WP_000362153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=AB69_RS0123960;product=hypothetical protein;protein_id=WP_000362153.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 51770 52051 . + . ID=gene-AB69_RS0123965;Name=AB69_RS0123965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0123965 NZ_JHDO01000075.1 Protein Homology CDS 51770 52051 . + 0 ID=cds-WP_000391950.1;Parent=gene-AB69_RS0123965;Dbxref=GenBank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391949.1;locus_tag=AB69_RS0123965;product=transcriptional regulator;protein_id=WP_000391950.1;transl_table=11 NZ_JHDO01000075.1 RefSeq gene 52035 52460 . + . ID=gene-AB69_RS15825;Name=AB69_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15825;old_locus_tag=AB69_1331 NZ_JHDO01000075.1 Protein Homology CDS 52035 52460 . + 0 ID=cds-WP_032231657.1;Parent=gene-AB69_RS15825;Dbxref=GenBank:WP_032231657.1;Name=WP_032231657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309098.1;locus_tag=AB69_RS15825;product=toxin YdaT family protein;protein_id=WP_032231657.1;transl_table=11 ##sequence-region NZ_JHDO01000076.1 1 8521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000076.1 RefSeq region 1 8521 . + . ID=NZ_JHDO01000076.1:1..8521;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000076.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS15820;Name=AB69_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15820;old_locus_tag=AB69_1332 NZ_JHDO01000076.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-4;Parent=gene-AB69_RS15820;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS15820;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000076.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-4;Parent=gene-AB69_RS15820;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS15820;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 995 1579 . + . ID=gene-AB69_RS15815;Name=AB69_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15815;old_locus_tag=AB69_1333 NZ_JHDO01000076.1 Protein Homology CDS 995 1579 . + 0 ID=cds-WP_032230828.1;Parent=gene-AB69_RS15815;Dbxref=GenBank:WP_032230828.1;Name=WP_032230828.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738261.1;locus_tag=AB69_RS15815;product=fimbrial protein;protein_id=WP_032230828.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 1654 2355 . + . ID=gene-AB69_RS15810;Name=AB69_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15810;old_locus_tag=AB69_1334 NZ_JHDO01000076.1 Protein Homology CDS 1654 2355 . + 0 ID=cds-WP_032230827.1;Parent=gene-AB69_RS15810;Dbxref=GenBank:WP_032230827.1;Name=WP_032230827.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523442.1;locus_tag=AB69_RS15810;product=fimbrial biogenesis chaperone;protein_id=WP_032230827.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 2450 2773 . + . ID=gene-AB69_RS0124005;Name=AB69_RS0124005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124005 NZ_JHDO01000076.1 Protein Homology CDS 2450 2773 . + 0 ID=cds-WP_235836324.1;Parent=gene-AB69_RS0124005;Dbxref=GenBank:WP_235836324.1;Name=WP_235836324.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595237.1;locus_tag=AB69_RS0124005;product=fimbria/pilus periplasmic chaperone;protein_id=WP_235836324.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 2800 5307 . + . ID=gene-AB69_RS15805;Name=AB69_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15805;old_locus_tag=AB69_1335 NZ_JHDO01000076.1 Protein Homology CDS 2800 5307 . + 0 ID=cds-WP_001701911.1;Parent=gene-AB69_RS15805;Dbxref=GenBank:WP_001701911.1;Name=WP_001701911.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701911.1;locus_tag=AB69_RS15805;product=fimbria/pilus outer membrane usher protein;protein_id=WP_001701911.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 5298 5984 . + . ID=gene-AB69_RS0124010;Name=AB69_RS0124010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124010 NZ_JHDO01000076.1 Protein Homology CDS 5298 5984 . + 0 ID=cds-WP_024180940.1;Parent=gene-AB69_RS0124010;Dbxref=GenBank:WP_024180940.1;Name=WP_024180940.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523439.1;locus_tag=AB69_RS0124010;product=fimbrial biogenesis chaperone;protein_id=WP_024180940.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 6051 6566 . + . ID=gene-AB69_RS15800;Name=AB69_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15800;old_locus_tag=AB69_1338 NZ_JHDO01000076.1 Protein Homology CDS 6051 6566 . + 0 ID=cds-WP_024180941.1;Parent=gene-AB69_RS15800;Dbxref=GenBank:WP_024180941.1;Name=WP_024180941.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523438.1;locus_tag=AB69_RS15800;product=fimbrial protein;protein_id=WP_024180941.1;transl_table=11 NZ_JHDO01000076.1 RefSeq gene 6675 7760 . + . ID=gene-AB69_RS15795;Name=AB69_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15795;old_locus_tag=AB69_1339 NZ_JHDO01000076.1 Protein Homology CDS 6675 7760 . + 0 ID=cds-WP_248785136.1;Parent=gene-AB69_RS15795;Dbxref=GenBank:WP_248785136.1;Name=WP_248785136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701919.1;locus_tag=AB69_RS15795;product=hypothetical protein;protein_id=WP_248785136.1;transl_table=11 NZ_JHDO01000076.1 RefSeq pseudogene 8156 8521 . + . ID=gene-AB69_RS0124015;Name=AB69_RS0124015;end_range=8521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124015;partial=true;pseudo=true NZ_JHDO01000076.1 Protein Homology CDS 8156 8521 . + 0 ID=cds-AB69_RS0124015;Parent=gene-AB69_RS0124015;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=8521,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB69_RS0124015;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000077.1 1 161583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000077.1 RefSeq region 1 161583 . + . ID=NZ_JHDO01000077.1:1..161583;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000077.1 RefSeq gene 48 1417 . + . ID=gene-AB69_RS28525;Name=AB69_RS28525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28525 NZ_JHDO01000077.1 Protein Homology CDS 48 528 . + 0 ID=cds-WP_085947770.1;Parent=gene-AB69_RS28525;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS28525;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDO01000077.1 Protein Homology CDS 528 1417 . + 2 ID=cds-WP_085947770.1;Parent=gene-AB69_RS28525;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS28525;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 1518 1673 . + . ID=gene-AB69_RS0124025;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AB69_RS0124025 NZ_JHDO01000077.1 Protein Homology CDS 1518 1673 . + 0 ID=cds-WP_000813254.1;Parent=gene-AB69_RS0124025;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB69_RS0124025;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 1715 1894 . - . ID=gene-AB69_RS30710;Name=AB69_RS30710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30710;old_locus_tag=AB69_1344 NZ_JHDO01000077.1 Protein Homology CDS 1715 1894 . - 0 ID=cds-WP_032231032.1;Parent=gene-AB69_RS30710;Dbxref=GenBank:WP_032231032.1;Name=WP_032231032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112740.1;locus_tag=AB69_RS30710;product=hypothetical protein;protein_id=WP_032231032.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 1841 2113 . + . ID=gene-AB69_RS0124030;Name=AB69_RS0124030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124030 NZ_JHDO01000077.1 Protein Homology CDS 1841 2113 . + 0 ID=cds-WP_032231033.1;Parent=gene-AB69_RS0124030;Dbxref=GenBank:WP_032231033.1;Name=WP_032231033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AB69_RS0124030;product=hypothetical protein;protein_id=WP_032231033.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 2115 3173 . + . ID=gene-AB69_RS15780;Name=AB69_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15780;old_locus_tag=AB69_1345 NZ_JHDO01000077.1 Protein Homology CDS 2115 3173 . + 0 ID=cds-WP_032231035.1;Parent=gene-AB69_RS15780;Dbxref=GenBank:WP_032231035.1;Name=WP_032231035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AB69_RS15780;product=DUF968 domain-containing protein;protein_id=WP_032231035.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 3174 3539 . + . ID=gene-AB69_RS15775;Name=AB69_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15775;old_locus_tag=AB69_1346 NZ_JHDO01000077.1 Protein Homology CDS 3174 3539 . + 0 ID=cds-WP_000140019.1;Parent=gene-AB69_RS15775;Dbxref=GenBank:WP_000140019.1;Name=WP_000140019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707876.1;locus_tag=AB69_RS15775;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000140019.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 3536 4225 . + . ID=gene-AB69_RS15770;Name=AB69_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15770;old_locus_tag=AB69_1347 NZ_JHDO01000077.1 Protein Homology CDS 3536 4225 . + 0 ID=cds-WP_001064887.1;Parent=gene-AB69_RS15770;Dbxref=GenBank:WP_001064887.1;Name=WP_001064887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064894.1;locus_tag=AB69_RS15770;product=bacteriophage antitermination protein Q;protein_id=WP_001064887.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 4370 5134 . + . ID=gene-AB69_RS15765;Name=AB69_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15765;old_locus_tag=AB69_1348 NZ_JHDO01000077.1 Protein Homology CDS 4370 5134 . + 0 ID=cds-WP_000392434.1;Parent=gene-AB69_RS15765;Dbxref=GenBank:WP_000392434.1;Name=WP_000392434.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392435.1;locus_tag=AB69_RS15765;product=serine/threonine-protein kinase;protein_id=WP_000392434.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 5131 5874 . + . ID=gene-AB69_RS15760;Name=AB69_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15760;old_locus_tag=AB69_1349 NZ_JHDO01000077.1 Protein Homology CDS 5131 5874 . + 0 ID=cds-WP_000615424.1;Parent=gene-AB69_RS15760;Dbxref=GenBank:WP_000615424.1;Name=WP_000615424.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615425.1;locus_tag=AB69_RS15760;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_000615424.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 6094 6291 . + . ID=gene-AB69_RS15755;Name=AB69_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15755;old_locus_tag=AB69_1350 NZ_JHDO01000077.1 Protein Homology CDS 6094 6291 . + 0 ID=cds-WP_000917767.1;Parent=gene-AB69_RS15755;Dbxref=GenBank:WP_000917767.1;Name=WP_000917767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AB69_RS15755;product=hypothetical protein;protein_id=WP_000917767.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 6442 7491 . + . ID=gene-AB69_RS15750;Name=AB69_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15750;old_locus_tag=AB69_1351 NZ_JHDO01000077.1 Protein Homology CDS 6442 7491 . + 0 ID=cds-WP_032231037.1;Parent=gene-AB69_RS15750;Dbxref=GenBank:WP_032231037.1;Name=WP_032231037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AB69_RS15750;product=DNA-methyltransferase;protein_id=WP_032231037.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 7541 7616 . + . ID=gene-AB69_RS15745;Name=AB69_RS15745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15745;old_locus_tag=AB69_1352 NZ_JHDO01000077.1 tRNAscan-SE tRNA 7541 7616 . + . ID=rna-AB69_RS15745;Parent=gene-AB69_RS15745;anticodon=(pos:7574..7576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15745;product=tRNA-Ile NZ_JHDO01000077.1 tRNAscan-SE exon 7541 7616 . + . ID=exon-AB69_RS15745-1;Parent=rna-AB69_RS15745;anticodon=(pos:7574..7576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15745;product=tRNA-Ile NZ_JHDO01000077.1 RefSeq gene 7624 7700 . + . ID=gene-AB69_RS0124035;Name=AB69_RS0124035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS0124035 NZ_JHDO01000077.1 tRNAscan-SE tRNA 7624 7700 . + . ID=rna-AB69_RS0124035;Parent=gene-AB69_RS0124035;anticodon=(pos:7658..7660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS0124035;product=tRNA-Arg NZ_JHDO01000077.1 tRNAscan-SE exon 7624 7700 . + . ID=exon-AB69_RS0124035-1;Parent=rna-AB69_RS0124035;anticodon=(pos:7658..7660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS0124035;product=tRNA-Arg NZ_JHDO01000077.1 RefSeq gene 7714 7790 . + . ID=gene-AB69_RS15740;Name=AB69_RS15740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15740;old_locus_tag=AB69_1353 NZ_JHDO01000077.1 tRNAscan-SE tRNA 7714 7790 . + . ID=rna-AB69_RS15740;Parent=gene-AB69_RS15740;anticodon=(pos:7748..7750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15740;product=tRNA-Arg NZ_JHDO01000077.1 tRNAscan-SE exon 7714 7790 . + . ID=exon-AB69_RS15740-1;Parent=rna-AB69_RS15740;anticodon=(pos:7748..7750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15740;product=tRNA-Arg NZ_JHDO01000077.1 RefSeq pseudogene 7884 8009 . - . ID=gene-AB69_RS30220;Name=AB69_RS30220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30220;partial=true;pseudo=true;start_range=.,7884 NZ_JHDO01000077.1 Protein Homology CDS 7884 8009 . - 0 ID=cds-AB69_RS30220;Parent=gene-AB69_RS30220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009199.1;locus_tag=AB69_RS30220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7884;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 8080 8415 . - . ID=gene-AB69_RS15735;Name=AB69_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15735;old_locus_tag=AB69_1354 NZ_JHDO01000077.1 Protein Homology CDS 8080 8415 . - 0 ID=cds-WP_000871291.1;Parent=gene-AB69_RS15735;Dbxref=GenBank:WP_000871291.1;Name=WP_000871291.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707425.1;locus_tag=AB69_RS15735;product=anti-adapter protein IraM;protein_id=WP_000871291.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 8675 8860 . + . ID=gene-AB69_RS15730;Name=AB69_RS15730;end_range=8860,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15730;old_locus_tag=AB69_1356;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 8675 8860 . + 0 ID=cds-AB69_RS15730;Parent=gene-AB69_RS15730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8860,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310289.1;locus_tag=AB69_RS15730;partial=true;product=DUF1737 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 8860 9021 . + . ID=gene-AB69_RS28530;Name=AB69_RS28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28530;old_locus_tag=AB69_1357 NZ_JHDO01000077.1 GeneMarkS-2+ CDS 8860 9021 . + 0 ID=cds-WP_001353249.1;Parent=gene-AB69_RS28530;Dbxref=GenBank:WP_001353249.1;Name=WP_001353249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS28530;product=hypothetical protein;protein_id=WP_001353249.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 9172 9387 . + . ID=gene-AB69_RS15725;Name=AB69_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15725;old_locus_tag=AB69_1358 NZ_JHDO01000077.1 Protein Homology CDS 9172 9387 . + 0 ID=cds-WP_000284510.1;Parent=gene-AB69_RS15725;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AB69_RS15725;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 9392 9571 . + . ID=gene-AB69_RS30820;Name=AB69_RS30820;end_range=9571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30820;old_locus_tag=AB69_1359;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 9392 9571 . + 0 ID=cds-AB69_RS30820;Parent=gene-AB69_RS30820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=AB69_RS30820;partial=true;product=DUF1327 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 9746 10279 . + . ID=gene-AB69_RS15715;Name=AB69_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15715;old_locus_tag=AB69_1360 NZ_JHDO01000077.1 Protein Homology CDS 9746 10279 . + 0 ID=cds-WP_032231039.1;Parent=gene-AB69_RS15715;Dbxref=GenBank:WP_032231039.1;Name=WP_032231039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309240.1;locus_tag=AB69_RS15715;product=lysozyme;protein_id=WP_032231039.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 10439 10576 . + . ID=gene-AB69_RS29960;Name=AB69_RS29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29960;old_locus_tag=AB69_1362 NZ_JHDO01000077.1 Protein Homology CDS 10439 10576 . + 0 ID=cds-WP_000459345.1;Parent=gene-AB69_RS29960;Dbxref=GenBank:WP_000459345.1;Name=WP_000459345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459350.1;locus_tag=AB69_RS29960;product=hypothetical protein;protein_id=WP_000459345.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 10578 11042 . + . ID=gene-AB69_RS30825;Name=AB69_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30825;old_locus_tag=AB69_1363 NZ_JHDO01000077.1 Protein Homology CDS 10578 11042 . + 0 ID=cds-WP_032231041.1;Parent=gene-AB69_RS30825;Dbxref=GenBank:WP_032231041.1;Name=WP_032231041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082537.1;locus_tag=AB69_RS30825;product=lysis protein;protein_id=WP_032231041.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 11350 11760 . - . ID=gene-AB69_RS0124050;Name=AB69_RS0124050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124050 NZ_JHDO01000077.1 Protein Homology CDS 11350 11760 . - 0 ID=cds-WP_032231042.1;Parent=gene-AB69_RS0124050;Dbxref=GenBank:WP_032231042.1;Name=WP_032231042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619138.1;locus_tag=AB69_RS0124050;product=DUF1398 domain-containing protein;protein_id=WP_032231042.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 11818 12051 . - . ID=gene-AB69_RS0124055;Name=AB69_RS0124055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124055 NZ_JHDO01000077.1 Protein Homology CDS 11818 12051 . - 0 ID=cds-WP_032231044.1;Parent=gene-AB69_RS0124055;Dbxref=GenBank:WP_032231044.1;Name=WP_032231044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AB69_RS0124055;product=YlcI/YnfO family protein;protein_id=WP_032231044.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 12479 12922 . + . ID=gene-AB69_RS0124065;Name=AB69_RS0124065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124065;old_locus_tag=AB69_1365 NZ_JHDO01000077.1 Protein Homology CDS 12479 12922 . + 0 ID=cds-WP_349251397.1;Parent=gene-AB69_RS0124065;Dbxref=GenBank:WP_349251397.1;Name=WP_349251397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324437.1;locus_tag=AB69_RS0124065;product=terminase small subunit;protein_id=WP_349251397.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 12844 13248 . + . ID=gene-AB69_RS15705;Name=AB69_RS15705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15705;old_locus_tag=AB69_1366;partial=true;pseudo=true;start_range=.,12844 NZ_JHDO01000077.1 Protein Homology CDS 12844 13248 . + 0 ID=cds-AB69_RS15705;Parent=gene-AB69_RS15705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706631.1;locus_tag=AB69_RS15705;partial=true;product=S49 family peptidase;pseudo=true;start_range=.,12844;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 13285 13632 . + . ID=gene-AB69_RS15700;Name=AB69_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15700;old_locus_tag=AB69_1367 NZ_JHDO01000077.1 Protein Homology CDS 13285 13632 . + 0 ID=cds-WP_000256823.1;Parent=gene-AB69_RS15700;Dbxref=GenBank:WP_000256823.1;Name=WP_000256823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309136.1;locus_tag=AB69_RS15700;product=head decoration protein;protein_id=WP_000256823.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 13690 14718 . + . ID=gene-AB69_RS15695;Name=AB69_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15695;old_locus_tag=AB69_1368 NZ_JHDO01000077.1 Protein Homology CDS 13690 14718 . + 0 ID=cds-WP_000522625.1;Parent=gene-AB69_RS15695;Dbxref=GenBank:WP_000522625.1;Name=WP_000522625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706633.1;locus_tag=AB69_RS15695;product=major capsid protein;protein_id=WP_000522625.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 14770 15138 . + . ID=gene-AB69_RS15690;Name=gpFI;gbkey=Gene;gene=gpFI;gene_biotype=protein_coding;locus_tag=AB69_RS15690;old_locus_tag=AB69_1369 NZ_JHDO01000077.1 Protein Homology CDS 14770 15138 . + 0 ID=cds-WP_000201509.1;Parent=gene-AB69_RS15690;Dbxref=GenBank:WP_000201509.1;Name=WP_000201509.1;gbkey=CDS;gene=gpFI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201507.1;locus_tag=AB69_RS15690;product=DNA-packaging protein FI;protein_id=WP_000201509.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 15131 15484 . + . ID=gene-AB69_RS15685;Name=AB69_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15685;old_locus_tag=AB69_1370 NZ_JHDO01000077.1 Protein Homology CDS 15131 15484 . + 0 ID=cds-WP_001204198.1;Parent=gene-AB69_RS15685;Dbxref=GenBank:WP_001204198.1;Name=WP_001204198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204533.1;locus_tag=AB69_RS15685;product=head-tail joining protein;protein_id=WP_001204198.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 15499 16074 . + . ID=gene-AB69_RS15680;Name=AB69_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15680;old_locus_tag=AB69_1371 NZ_JHDO01000077.1 Protein Homology CDS 15499 16074 . + 0 ID=cds-WP_000975011.1;Parent=gene-AB69_RS15680;Dbxref=GenBank:WP_000975011.1;Name=WP_000975011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310198.1;locus_tag=AB69_RS15680;product=phage tail protein;protein_id=WP_000975011.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 16071 16466 . + . ID=gene-AB69_RS30830;Name=AB69_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30830;old_locus_tag=AB69_1372 NZ_JHDO01000077.1 Protein Homology CDS 16071 16466 . + 0 ID=cds-WP_000683079.1;Parent=gene-AB69_RS30830;Dbxref=GenBank:WP_000683079.1;Name=WP_000683079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310197.1;locus_tag=AB69_RS30830;product=phage minor tail U family protein;protein_id=WP_000683079.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 16484 16756 . + . ID=gene-AB69_RS30835;Name=AB69_RS30835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30835;partial=true;pseudo=true;start_range=.,16484 NZ_JHDO01000077.1 Protein Homology CDS 16484 16756 . + 0 ID=cds-AB69_RS30835;Parent=gene-AB69_RS30835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309144.2;locus_tag=AB69_RS30835;partial=true;product=NlpC/P60 family protein;pseudo=true;start_range=.,16484;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 16753 17334 . + . ID=gene-AB69_RS15670;Name=AB69_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15670;old_locus_tag=AB69_1374 NZ_JHDO01000077.1 Protein Homology CDS 16753 17334 . + 0 ID=cds-WP_032265145.1;Parent=gene-AB69_RS15670;Dbxref=GenBank:WP_032265145.1;Name=WP_032265145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AB69_RS15670;product=tail assembly protein;protein_id=WP_032265145.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 17575 18210 . + . ID=gene-AB69_RS28545;Name=gpJ;end_range=18210,.;gbkey=Gene;gene=gpJ;gene_biotype=pseudogene;locus_tag=AB69_RS28545;old_locus_tag=AB69_1375;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 17575 18210 . + 0 ID=cds-AB69_RS28545;Parent=gene-AB69_RS28545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18210,.;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309148.1;locus_tag=AB69_RS28545;partial=true;product=TipJ family phage tail tip protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 18281 18457 . + . ID=gene-AB69_RS29295;Name=AB69_RS29295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29295;partial=true;pseudo=true;start_range=.,18281 NZ_JHDO01000077.1 Protein Homology CDS 18281 18457 . + 0 ID=cds-AB69_RS29295;Parent=gene-AB69_RS29295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AB69_RS29295;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,18281;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 18554 18823 . + . ID=gene-AB69_RS30840;Name=AB69_RS30840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30840;partial=true;pseudo=true;start_range=.,18554 NZ_JHDO01000077.1 Protein Homology CDS 18554 18823 . + 0 ID=cds-AB69_RS30840;Parent=gene-AB69_RS30840;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AB69_RS30840;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,18554;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 19046 19171 . + . ID=gene-AB69_RS26805;Name=AB69_RS26805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26805;old_locus_tag=AB69_1377;partial=true;pseudo=true;start_range=.,19046 NZ_JHDO01000077.1 Protein Homology CDS 19046 19171 . + 0 ID=cds-AB69_RS26805;Parent=gene-AB69_RS26805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AB69_RS26805;partial=true;product=OmpW family outer membrane protein;pseudo=true;start_range=.,19046;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 19231 19737 . - . ID=gene-AB69_RS15655;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AB69_RS15655;old_locus_tag=AB69_1378 NZ_JHDO01000077.1 Protein Homology CDS 19231 19737 . - 0 ID=cds-WP_001079505.1;Parent=gene-AB69_RS15655;Dbxref=GenBank:WP_001079505.1;Name=WP_001079505.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AB69_RS15655;product=ferritin-like domain-containing protein;protein_id=WP_001079505.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 19783 20283 . - . ID=gene-AB69_RS15650;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AB69_RS15650;old_locus_tag=AB69_1379 NZ_JHDO01000077.1 Protein Homology CDS 19783 20283 . - 0 ID=cds-WP_001056490.1;Parent=gene-AB69_RS15650;Dbxref=GenBank:WP_001056490.1;Name=WP_001056490.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AB69_RS15650;product=ferritin-like domain-containing protein;protein_id=WP_001056490.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 20369 20548 . - . ID=gene-AB69_RS15645;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AB69_RS15645;old_locus_tag=AB69_1380 NZ_JHDO01000077.1 Protein Homology CDS 20369 20548 . - 0 ID=cds-WP_000807651.1;Parent=gene-AB69_RS15645;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AB69_RS15645;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 20929 21735 . - . ID=gene-AB69_RS15640;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AB69_RS15640;old_locus_tag=AB69_1381 NZ_JHDO01000077.1 Protein Homology CDS 20929 21735 . - 0 ID=cds-WP_000443067.1;Parent=gene-AB69_RS15640;Dbxref=GenBank:WP_000443067.1;Name=WP_000443067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AB69_RS15640;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 21735 22928 . - . ID=gene-AB69_RS15635;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AB69_RS15635;old_locus_tag=AB69_1382 NZ_JHDO01000077.1 Protein Homology CDS 21735 22928 . - 0 ID=cds-WP_000209520.1;Parent=gene-AB69_RS15635;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AB69_RS15635;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 22940 24301 . - . ID=gene-AB69_RS15630;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AB69_RS15630;old_locus_tag=AB69_1383 NZ_JHDO01000077.1 Protein Homology CDS 22940 24301 . - 0 ID=cds-WP_000983871.1;Parent=gene-AB69_RS15630;Dbxref=GenBank:WP_000983871.1;Name=WP_000983871.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415778.3;locus_tag=AB69_RS15630;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_000983871.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 24302 25897 . - . ID=gene-AB69_RS15625;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AB69_RS15625;old_locus_tag=AB69_1384 NZ_JHDO01000077.1 Protein Homology CDS 24302 25897 . - 0 ID=cds-WP_000763511.1;Parent=gene-AB69_RS15625;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AB69_RS15625;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 25897 27459 . - . ID=gene-AB69_RS15620;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AB69_RS15620;old_locus_tag=AB69_1385 NZ_JHDO01000077.1 Protein Homology CDS 25897 27459 . - 0 ID=cds-WP_001194582.1;Parent=gene-AB69_RS15620;Dbxref=GenBank:WP_001194582.1;Name=WP_001194582.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AB69_RS15620;product=anthranilate synthase component I;protein_id=WP_001194582.1;transl_table=11 NZ_JHDO01000077.1 cmsearch sequence_feature 27481 27574 . - . ID=id-NZ_JHDO01000077.1:27481..27574;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000077.1 RefSeq gene 27551 27595 . - . ID=gene-AB69_RS26810;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AB69_RS26810 NZ_JHDO01000077.1 Protein Homology CDS 27551 27595 . - 0 ID=cds-WP_001700591.1;Parent=gene-AB69_RS26810;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AB69_RS26810;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 27733 28614 . + . ID=gene-AB69_RS15615;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AB69_RS15615;old_locus_tag=AB69_1386 NZ_JHDO01000077.1 Protein Homology CDS 27733 28614 . + 0 ID=cds-WP_001285661.1;Parent=gene-AB69_RS15615;Dbxref=GenBank:WP_001285661.1;Name=WP_001285661.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AB69_RS15615;product=RNase RNM;protein_id=WP_001285661.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 28611 29231 . + . ID=gene-AB69_RS15610;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AB69_RS15610;old_locus_tag=AB69_1387 NZ_JHDO01000077.1 Protein Homology CDS 28611 29231 . + 0 ID=cds-WP_001295575.1;Parent=gene-AB69_RS15610;Dbxref=GenBank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AB69_RS15610;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 29259 31154 . + . ID=gene-AB69_RS15605;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AB69_RS15605;old_locus_tag=AB69_1388 NZ_JHDO01000077.1 Protein Homology CDS 29259 31154 . + 0 ID=cds-WP_001326916.1;Parent=gene-AB69_RS15605;Dbxref=GenBank:WP_001326916.1;Name=WP_001326916.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AB69_RS15605;product=DUF2207 domain-containing protein;protein_id=WP_001326916.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 31365 32240 . + . ID=gene-AB69_RS15600;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AB69_RS15600;old_locus_tag=AB69_1389 NZ_JHDO01000077.1 Protein Homology CDS 31365 32240 . + 0 ID=cds-WP_001291217.1;Parent=gene-AB69_RS15600;Dbxref=GenBank:WP_001291217.1;Name=WP_001291217.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AB69_RS15600;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291217.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 32280 32870 . - . ID=gene-AB69_RS15595;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AB69_RS15595;old_locus_tag=AB69_1390 NZ_JHDO01000077.1 Protein Homology CDS 32280 32870 . - 0 ID=cds-WP_001278906.1;Parent=gene-AB69_RS15595;Dbxref=GenBank:WP_001278906.1;Name=WP_001278906.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AB69_RS15595;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278906.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 32867 33625 . - . ID=gene-AB69_RS15590;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AB69_RS15590;old_locus_tag=AB69_1391 NZ_JHDO01000077.1 Protein Homology CDS 32867 33625 . - 0 ID=cds-WP_032235684.1;Parent=gene-AB69_RS15590;Dbxref=GenBank:WP_032235684.1;Name=WP_032235684.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415787.1;locus_tag=AB69_RS15590;product=YciK family oxidoreductase;protein_id=WP_032235684.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 33845 34894 . + . ID=gene-AB69_RS15585;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AB69_RS15585;old_locus_tag=AB69_1392 NZ_JHDO01000077.1 Protein Homology CDS 33845 34894 . + 0 ID=cds-WP_000422045.1;Parent=gene-AB69_RS15585;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AB69_RS15585;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 34930 35181 . - . ID=gene-AB69_RS15580;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AB69_RS15580;old_locus_tag=AB69_1393 NZ_JHDO01000077.1 Protein Homology CDS 34930 35181 . - 0 ID=cds-WP_001031530.1;Parent=gene-AB69_RS15580;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AB69_RS15580;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 35561 38158 . + . ID=gene-AB69_RS15575;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AB69_RS15575;old_locus_tag=AB69_1394 NZ_JHDO01000077.1 Protein Homology CDS 35561 38158 . + 0 ID=cds-WP_001297122.1;Parent=gene-AB69_RS15575;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AB69_RS15575;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 38368 39342 . + . ID=gene-AB69_RS15570;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AB69_RS15570;old_locus_tag=AB69_1395 NZ_JHDO01000077.1 Protein Homology CDS 38368 39342 . + 0 ID=cds-WP_032231050.1;Parent=gene-AB69_RS15570;Dbxref=GenBank:WP_032231050.1;Name=WP_032231050.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AB69_RS15570;product=HTH-type transcriptional regulator CysB;protein_id=WP_032231050.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 39661 39801 . + . ID=gene-AB69_RS15565;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AB69_RS15565;old_locus_tag=AB69_1396 NZ_JHDO01000077.1 Protein Homology CDS 39661 39801 . + 0 ID=cds-WP_001300896.1;Parent=gene-AB69_RS15565;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AB69_RS15565;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 39804 39971 . + . ID=gene-AB69_RS15560;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AB69_RS15560;old_locus_tag=AB69_1397 NZ_JHDO01000077.1 Protein Homology CDS 39804 39971 . + 0 ID=cds-WP_001297116.1;Parent=gene-AB69_RS15560;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AB69_RS15560;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 40085 40180 . + . ID=gene-AB69_RS29750;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AB69_RS29750 NZ_JHDO01000077.1 Protein Homology CDS 40085 40180 . + 0 ID=cds-WP_001310756.1;Parent=gene-AB69_RS29750;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AB69_RS29750;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 40344 43019 . + . ID=gene-AB69_RS15555;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AB69_RS15555;old_locus_tag=AB69_1398 NZ_JHDO01000077.1 Protein Homology CDS 40344 43019 . + 0 ID=cds-WP_032231051.1;Parent=gene-AB69_RS15555;Dbxref=GenBank:WP_032231051.1;Name=WP_032231051.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AB69_RS15555;product=aconitate hydratase AcnA;protein_id=WP_032231051.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 43083 43673 . - . ID=gene-AB69_RS15550;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AB69_RS15550;old_locus_tag=AB69_1399 NZ_JHDO01000077.1 Protein Homology CDS 43083 43673 . - 0 ID=cds-WP_001176295.1;Parent=gene-AB69_RS15550;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AB69_RS15550;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 43843 44607 . + . ID=gene-AB69_RS15545;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AB69_RS15545;old_locus_tag=AB69_1400 NZ_JHDO01000077.1 Protein Homology CDS 43843 44607 . + 0 ID=cds-WP_001256538.1;Parent=gene-AB69_RS15545;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AB69_RS15545;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 44756 45064 . + . ID=gene-AB69_RS15540;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AB69_RS15540;old_locus_tag=AB69_1401 NZ_JHDO01000077.1 Protein Homology CDS 44756 45064 . + 0 ID=cds-WP_000876286.1;Parent=gene-AB69_RS15540;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AB69_RS15540;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 45071 46240 . + . ID=gene-AB69_RS15535;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AB69_RS15535;old_locus_tag=AB69_1402 NZ_JHDO01000077.1 Protein Homology CDS 45071 46240 . + 0 ID=cds-WP_000891353.1;Parent=gene-AB69_RS15535;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AB69_RS15535;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 46434 47171 . + . ID=gene-AB69_RS15530;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AB69_RS15530;old_locus_tag=AB69_1404 NZ_JHDO01000077.1 Protein Homology CDS 46434 47171 . + 0 ID=cds-WP_000176270.1;Parent=gene-AB69_RS15530;Dbxref=GenBank:WP_000176270.1;Name=WP_000176270.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AB69_RS15530;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 47171 47497 . + . ID=gene-AB69_RS15525;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AB69_RS15525;old_locus_tag=AB69_1405 NZ_JHDO01000077.1 Protein Homology CDS 47171 47497 . + 0 ID=cds-WP_001295580.1;Parent=gene-AB69_RS15525;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AB69_RS15525;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 47623 47841 . - . ID=gene-AB69_RS15520;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AB69_RS15520;old_locus_tag=AB69_1406 NZ_JHDO01000077.1 Protein Homology CDS 47623 47841 . - 0 ID=cds-WP_000498253.1;Parent=gene-AB69_RS15520;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AB69_RS15520;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 48110 48859 . - . ID=gene-AB69_RS15515;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AB69_RS15515;old_locus_tag=AB69_1407 NZ_JHDO01000077.1 Protein Homology CDS 48110 48859 . - 0 ID=cds-WP_001088621.1;Parent=gene-AB69_RS15515;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AB69_RS15515;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 48949 49122 . - . ID=gene-AB69_RS15510;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AB69_RS15510;old_locus_tag=AB69_1408 NZ_JHDO01000077.1 Protein Homology CDS 48949 49122 . - 0 ID=cds-WP_001288368.1;Parent=gene-AB69_RS15510;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AB69_RS15510;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 49160 49288 . + . ID=gene-AB69_RS30230;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AB69_RS30230 NZ_JHDO01000077.1 Protein Homology CDS 49160 49288 . + 0 ID=cds-WP_211180493.1;Parent=gene-AB69_RS30230;Dbxref=GenBank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AB69_RS30230;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 49270 51255 . - . ID=gene-AB69_RS15505;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AB69_RS15505;old_locus_tag=AB69_1409 NZ_JHDO01000077.1 Protein Homology CDS 49270 51255 . - 0 ID=cds-WP_000859945.1;Parent=gene-AB69_RS15505;Dbxref=GenBank:WP_000859945.1;Name=WP_000859945.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=AB69_RS15505;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000859945.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 51309 51412 . + . ID=gene-AB69_RS28555;Name=AB69_RS28555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28555;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 51309 51412 . + 0 ID=cds-AB69_RS28555;Parent=gene-AB69_RS28555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AB69_RS28555;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 51490 53424 . - . ID=gene-AB69_RS15500;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AB69_RS15500;old_locus_tag=AB69_1410 NZ_JHDO01000077.1 Protein Homology CDS 51490 53424 . - 0 ID=cds-WP_000484984.1;Parent=gene-AB69_RS15500;Dbxref=GenBank:WP_000484984.1;Name=WP_000484984.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AB69_RS15500;product=exoribonuclease II;protein_id=WP_000484984.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 53492 54619 . - . ID=gene-AB69_RS15495;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AB69_RS15495;old_locus_tag=AB69_1411 NZ_JHDO01000077.1 Protein Homology CDS 53492 54619 . - 0 ID=cds-WP_001335988.1;Parent=gene-AB69_RS15495;Dbxref=GenBank:WP_001335988.1;Name=WP_001335988.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AB69_RS15495;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001335988.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 54763 55551 . - . ID=gene-AB69_RS15490;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AB69_RS15490;old_locus_tag=AB69_1412 NZ_JHDO01000077.1 Protein Homology CDS 54763 55551 . - 0 ID=cds-WP_000506490.1;Parent=gene-AB69_RS15490;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AB69_RS15490;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 55919 56272 . - . ID=gene-AB69_RS15485;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AB69_RS15485;old_locus_tag=AB69_1413 NZ_JHDO01000077.1 Protein Homology CDS 55919 56272 . - 0 ID=cds-WP_000565727.1;Parent=gene-AB69_RS15485;Dbxref=GenBank:WP_000565727.1;Name=WP_000565727.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AB69_RS15485;product=DUF559 domain-containing protein;protein_id=WP_000565727.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 56340 57146 . - . ID=gene-AB69_RS15480;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AB69_RS15480;old_locus_tag=AB69_1414 NZ_JHDO01000077.1 Protein Homology CDS 56340 57146 . - 0 ID=cds-WP_000573407.1;Parent=gene-AB69_RS15480;Dbxref=GenBank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AB69_RS15480;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 57148 58140 . - . ID=gene-AB69_RS15475;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AB69_RS15475;old_locus_tag=AB69_1415 NZ_JHDO01000077.1 Protein Homology CDS 57148 58140 . - 0 ID=cds-WP_001128858.1;Parent=gene-AB69_RS15475;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AB69_RS15475;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 58140 59030 . - . ID=gene-AB69_RS15470;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AB69_RS15470;old_locus_tag=AB69_1416 NZ_JHDO01000077.1 Protein Homology CDS 58140 59030 . - 0 ID=cds-WP_001146163.1;Parent=gene-AB69_RS15470;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AB69_RS15470;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 59017 59982 . - . ID=gene-AB69_RS15465;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AB69_RS15465;old_locus_tag=AB69_1417 NZ_JHDO01000077.1 Protein Homology CDS 59017 59982 . - 0 ID=cds-WP_000583277.1;Parent=gene-AB69_RS15465;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AB69_RS15465;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 59979 61622 . - . ID=gene-AB69_RS15460;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AB69_RS15460;old_locus_tag=AB69_1418 NZ_JHDO01000077.1 Protein Homology CDS 59979 61622 . - 0 ID=cds-WP_001250216.1;Parent=gene-AB69_RS15460;Dbxref=GenBank:WP_001250216.1;Name=WP_001250216.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AB69_RS15460;product=ABC transporter substrate-binding protein SapA;protein_id=WP_001250216.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 61935 62180 . - . ID=gene-AB69_RS15455;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AB69_RS15455;old_locus_tag=AB69_1420 NZ_JHDO01000077.1 Protein Homology CDS 61935 62180 . - 0 ID=cds-WP_001015110.1;Parent=gene-AB69_RS15455;Dbxref=GenBank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AB69_RS15455;product=YmjA family protein;protein_id=WP_001015110.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 62314 63699 . - . ID=gene-AB69_RS15450;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AB69_RS15450;old_locus_tag=AB69_1421 NZ_JHDO01000077.1 Protein Homology CDS 62314 63699 . - 0 ID=cds-WP_000996856.1;Parent=gene-AB69_RS15450;Dbxref=GenBank:WP_000996856.1;Name=WP_000996856.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415812.4;locus_tag=AB69_RS15450;product=putrescine/proton symporter PuuP;protein_id=WP_000996856.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 63689 63853 . - . ID=gene-AB69_RS29755;Name=AB69_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29755 NZ_JHDO01000077.1 Protein Homology CDS 63689 63853 . - 0 ID=cds-WP_120795382.1;Parent=gene-AB69_RS29755;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AB69_RS29755;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 64002 65420 . - . ID=gene-AB69_RS15445;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AB69_RS15445;old_locus_tag=AB69_1422 NZ_JHDO01000077.1 Protein Homology CDS 64002 65420 . - 0 ID=cds-WP_032231053.1;Parent=gene-AB69_RS15445;Dbxref=GenBank:WP_032231053.1;Name=WP_032231053.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AB69_RS15445;product=glutamate-putrescine ligase;protein_id=WP_032231053.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 65632 66396 . + . ID=gene-AB69_RS15440;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AB69_RS15440;old_locus_tag=AB69_1423 NZ_JHDO01000077.1 Protein Homology CDS 65632 66396 . + 0 ID=cds-WP_001300506.1;Parent=gene-AB69_RS15440;Dbxref=GenBank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AB69_RS15440;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 66423 66980 . + . ID=gene-AB69_RS15435;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AB69_RS15435;old_locus_tag=AB69_1424 NZ_JHDO01000077.1 Protein Homology CDS 66423 66980 . + 0 ID=cds-WP_001278727.1;Parent=gene-AB69_RS15435;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AB69_RS15435;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 67255 68742 . + . ID=gene-AB69_RS15430;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AB69_RS15430;old_locus_tag=AB69_1425 NZ_JHDO01000077.1 Protein Homology CDS 67255 68742 . + 0 ID=cds-WP_001009090.1;Parent=gene-AB69_RS15430;Dbxref=GenBank:WP_001009090.1;Name=WP_001009090.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AB69_RS15430;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 68744 70024 . + . ID=gene-AB69_RS15425;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AB69_RS15425;old_locus_tag=AB69_1426 NZ_JHDO01000077.1 Protein Homology CDS 68744 70024 . + 0 ID=cds-WP_000134870.1;Parent=gene-AB69_RS15425;Dbxref=GenBank:WP_000134870.1;Name=WP_000134870.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AB69_RS15425;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134870.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 70062 71327 . + . ID=gene-AB69_RS15420;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AB69_RS15420;old_locus_tag=AB69_1427 NZ_JHDO01000077.1 Protein Homology CDS 70062 71327 . + 0 ID=cds-WP_000069232.1;Parent=gene-AB69_RS15420;Dbxref=GenBank:WP_000069232.1;Name=WP_000069232.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AB69_RS15420;product=4-aminobutyrate transaminase;protein_id=WP_000069232.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 71447 72424 . - . ID=gene-AB69_RS15415;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AB69_RS15415;old_locus_tag=AB69_1428 NZ_JHDO01000077.1 Protein Homology CDS 71447 72424 . - 0 ID=cds-WP_000852835.1;Parent=gene-AB69_RS15415;Dbxref=GenBank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AB69_RS15415;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 72591 73259 . + . ID=gene-AB69_RS15410;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AB69_RS15410;old_locus_tag=AB69_1429 NZ_JHDO01000077.1 Protein Homology CDS 72591 73259 . + 0 ID=cds-WP_000511025.1;Parent=gene-AB69_RS15410;Dbxref=GenBank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AB69_RS15410;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 73313 73537 . + . ID=gene-AB69_RS15405;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AB69_RS15405;old_locus_tag=AB69_1430 NZ_JHDO01000077.1 Protein Homology CDS 73313 73537 . + 0 ID=cds-WP_001274963.1;Parent=gene-AB69_RS15405;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AB69_RS15405;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 73537 73896 . + . ID=gene-AB69_RS15400;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AB69_RS15400;old_locus_tag=AB69_1431 NZ_JHDO01000077.1 Protein Homology CDS 73537 73896 . + 0 ID=cds-WP_000907387.1;Parent=gene-AB69_RS15400;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AB69_RS15400;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 73905 74126 . + . ID=gene-AB69_RS15395;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AB69_RS15395;old_locus_tag=AB69_1432 NZ_JHDO01000077.1 Protein Homology CDS 73905 74126 . + 0 ID=cds-WP_032231055.1;Parent=gene-AB69_RS15395;Dbxref=GenBank:WP_032231055.1;Name=WP_032231055.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AB69_RS15395;product=phage shock protein PspD;protein_id=WP_032231055.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 74201 74515 . + . ID=gene-AB69_RS15390;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AB69_RS15390;old_locus_tag=AB69_1433 NZ_JHDO01000077.1 Protein Homology CDS 74201 74515 . + 0 ID=cds-WP_000473109.1;Parent=gene-AB69_RS15390;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AB69_RS15390;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 74728 76407 . + . ID=gene-AB69_RS15385;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AB69_RS15385;old_locus_tag=AB69_1434 NZ_JHDO01000077.1 Protein Homology CDS 74728 76407 . + 0 ID=cds-WP_000810500.1;Parent=gene-AB69_RS15385;Dbxref=GenBank:WP_000810500.1;Name=WP_000810500.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AB69_RS15385;product=glucosylglycerate phosphorylase;protein_id=WP_000810500.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 76421 77713 . + . ID=gene-AB69_RS15380;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AB69_RS15380;old_locus_tag=AB69_1435 NZ_JHDO01000077.1 Protein Homology CDS 76421 77713 . + 0 ID=cds-WP_032231056.1;Parent=gene-AB69_RS15380;Dbxref=GenBank:WP_032231056.1;Name=WP_032231056.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AB69_RS15380;product=ABC transporter substrate-binding protein;protein_id=WP_032231056.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 77734 78615 . + . ID=gene-AB69_RS15375;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AB69_RS15375;old_locus_tag=AB69_1436 NZ_JHDO01000077.1 Protein Homology CDS 77734 78615 . + 0 ID=cds-WP_001080790.1;Parent=gene-AB69_RS15375;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AB69_RS15375;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 78602 79444 . + . ID=gene-AB69_RS15370;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AB69_RS15370;old_locus_tag=AB69_1437 NZ_JHDO01000077.1 Protein Homology CDS 78602 79444 . + 0 ID=cds-WP_032231058.1;Parent=gene-AB69_RS15370;Dbxref=GenBank:WP_032231058.1;Name=WP_032231058.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AB69_RS15370;product=carbohydrate ABC transporter permease;protein_id=WP_032231058.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 79475 80527 . + . ID=gene-AB69_RS15365;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AB69_RS15365;old_locus_tag=AB69_1438 NZ_JHDO01000077.1 Protein Homology CDS 79475 80527 . + 0 ID=cds-WP_000737347.1;Parent=gene-AB69_RS15365;Dbxref=GenBank:WP_000737347.1;Name=WP_000737347.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AB69_RS15365;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 80546 81334 . + . ID=gene-AB69_RS15360;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AB69_RS15360;old_locus_tag=AB69_1439 NZ_JHDO01000077.1 Protein Homology CDS 80546 81334 . + 0 ID=cds-WP_000690230.1;Parent=gene-AB69_RS15360;Dbxref=GenBank:WP_000690230.1;Name=WP_000690230.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AB69_RS15360;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000690230.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 81344 82399 . + . ID=gene-AB69_RS15355;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AB69_RS15355;old_locus_tag=AB69_1440 NZ_JHDO01000077.1 Protein Homology CDS 81344 82399 . + 0 ID=cds-WP_050428509.1;Parent=gene-AB69_RS15355;Dbxref=GenBank:WP_050428509.1;Name=WP_050428509.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309921.1;locus_tag=AB69_RS15355;product=Gfo/Idh/MocA family protein;protein_id=WP_050428509.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 82396 84663 . + . ID=gene-AB69_RS15350;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AB69_RS15350;old_locus_tag=AB69_1441 NZ_JHDO01000077.1 Protein Homology CDS 82396 84663 . + 0 ID=cds-WP_021544764.1;Parent=gene-AB69_RS15350;Dbxref=GenBank:WP_021544764.1;Name=WP_021544764.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AB69_RS15350;product=kojibiose phosphorylase;protein_id=WP_021544764.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 84660 85319 . + . ID=gene-AB69_RS15345;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AB69_RS15345;old_locus_tag=AB69_1442 NZ_JHDO01000077.1 Protein Homology CDS 84660 85319 . + 0 ID=cds-WP_000775794.1;Parent=gene-AB69_RS15345;Dbxref=GenBank:WP_000775794.1;Name=WP_000775794.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AB69_RS15345;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 85333 86415 . + . ID=gene-AB69_RS15340;Name=AB69_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15340;old_locus_tag=AB69_1443 NZ_JHDO01000077.1 Protein Homology CDS 85333 86415 . + 0 ID=cds-WP_032231059.1;Parent=gene-AB69_RS15340;Dbxref=GenBank:WP_032231059.1;Name=WP_032231059.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AB69_RS15340;product=ABC transporter ATP-binding protein;protein_id=WP_032231059.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 86460 87365 . + . ID=gene-AB69_RS15335;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AB69_RS15335;old_locus_tag=AB69_1444 NZ_JHDO01000077.1 Protein Homology CDS 86460 87365 . + 0 ID=cds-WP_032231060.1;Parent=gene-AB69_RS15335;Dbxref=GenBank:WP_032231060.1;Name=WP_032231060.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AB69_RS15335;product=monomeric porin OmpG;protein_id=WP_032231060.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 87476 88474 . - . ID=gene-AB69_RS15330;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AB69_RS15330;old_locus_tag=AB69_1445 NZ_JHDO01000077.1 Protein Homology CDS 87476 88474 . - 0 ID=cds-WP_000075375.1;Parent=gene-AB69_RS15330;Dbxref=GenBank:WP_000075375.1;Name=WP_000075375.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AB69_RS15330;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075375.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 88630 90027 . + . ID=gene-AB69_RS15325;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AB69_RS15325;old_locus_tag=AB69_1446 NZ_JHDO01000077.1 Protein Homology CDS 88630 90027 . + 0 ID=cds-WP_000825777.1;Parent=gene-AB69_RS15325;Dbxref=GenBank:WP_000825777.1;Name=WP_000825777.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AB69_RS15325;product=YcjX family protein;protein_id=WP_000825777.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 90024 91085 . + . ID=gene-AB69_RS15320;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AB69_RS15320;old_locus_tag=AB69_1447 NZ_JHDO01000077.1 Protein Homology CDS 90024 91085 . + 0 ID=cds-WP_000138728.1;Parent=gene-AB69_RS15320;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AB69_RS15320;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 91233 92774 . + . ID=gene-AB69_RS15315;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AB69_RS15315;old_locus_tag=AB69_1448 NZ_JHDO01000077.1 Protein Homology CDS 91233 92774 . + 0 ID=cds-WP_032231062.1;Parent=gene-AB69_RS15315;Dbxref=GenBank:WP_032231062.1;Name=WP_032231062.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AB69_RS15315;product=transcriptional regulator TyrR;protein_id=WP_032231062.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 92818 93324 . - . ID=gene-AB69_RS15310;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AB69_RS15310;old_locus_tag=AB69_1449 NZ_JHDO01000077.1 Protein Homology CDS 92818 93324 . - 0 ID=cds-WP_000084387.1;Parent=gene-AB69_RS15310;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AB69_RS15310;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 93443 94408 . + . ID=gene-AB69_RS15305;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AB69_RS15305;old_locus_tag=AB69_1450 NZ_JHDO01000077.1 Protein Homology CDS 93443 94408 . + 0 ID=cds-WP_001261211.1;Parent=gene-AB69_RS15305;Dbxref=GenBank:WP_001261211.1;Name=WP_001261211.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415841.4;locus_tag=AB69_RS15305;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001261211.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 94383 95111 . - . ID=gene-AB69_RS15300;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AB69_RS15300;old_locus_tag=AB69_1451 NZ_JHDO01000077.1 Protein Homology CDS 94383 95111 . - 0 ID=cds-WP_001295589.1;Parent=gene-AB69_RS15300;Dbxref=GenBank:WP_001295589.1;Name=WP_001295589.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AB69_RS15300;product=murein tripeptide amidase MpaA;protein_id=WP_001295589.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 95188 95376 . - . ID=gene-AB69_RS15295;Name=AB69_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15295;old_locus_tag=AB69_1452 NZ_JHDO01000077.1 Protein Homology CDS 95188 95376 . - 0 ID=cds-WP_001295590.1;Parent=gene-AB69_RS15295;Dbxref=GenBank:WP_001295590.1;Name=WP_001295590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AB69_RS15295;product=NAD(P)H-binding protein;protein_id=WP_001295590.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 95447 96367 . - . ID=gene-AB69_RS15290;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AB69_RS15290;old_locus_tag=AB69_1453 NZ_JHDO01000077.1 Protein Homology CDS 95447 96367 . - 0 ID=cds-WP_001302107.1;Parent=gene-AB69_RS15290;Dbxref=GenBank:WP_001302107.1;Name=WP_001302107.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309936.2;locus_tag=AB69_RS15290;product=alpha/beta hydrolase;protein_id=WP_001302107.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 96505 97404 . + . ID=gene-AB69_RS15285;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AB69_RS15285;old_locus_tag=AB69_1454 NZ_JHDO01000077.1 Protein Homology CDS 96505 97404 . + 0 ID=cds-WP_000817688.1;Parent=gene-AB69_RS15285;Dbxref=GenBank:WP_000817688.1;Name=WP_000817688.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=AB69_RS15285;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817688.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 97741 99354 . + . ID=gene-AB69_RS15280;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AB69_RS15280;old_locus_tag=AB69_1455 NZ_JHDO01000077.1 Protein Homology CDS 97741 99354 . + 0 ID=cds-WP_000683020.1;Parent=gene-AB69_RS15280;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AB69_RS15280;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 99405 100436 . - . ID=gene-AB69_RS15275;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AB69_RS15275;old_locus_tag=AB69_1456 NZ_JHDO01000077.1 Protein Homology CDS 99405 100436 . - 0 ID=cds-WP_000559900.1;Parent=gene-AB69_RS15275;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AB69_RS15275;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 100680 100937 . + . ID=gene-AB69_RS15270;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AB69_RS15270;old_locus_tag=AB69_1457 NZ_JHDO01000077.1 Protein Homology CDS 100680 100937 . + 0 ID=cds-WP_000605090.1;Parent=gene-AB69_RS15270;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AB69_RS15270;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 100987 101937 . - . ID=gene-AB69_RS15265;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AB69_RS15265;old_locus_tag=AB69_1458 NZ_JHDO01000077.1 Protein Homology CDS 100987 101937 . - 0 ID=cds-WP_001262123.1;Parent=gene-AB69_RS15265;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AB69_RS15265;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 102089 102841 . - . ID=gene-AB69_RS15260;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AB69_RS15260;old_locus_tag=AB69_1459 NZ_JHDO01000077.1 Protein Homology CDS 102089 102841 . - 0 ID=cds-WP_000611911.1;Parent=gene-AB69_RS15260;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AB69_RS15260;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 103036 103551 . - . ID=gene-AB69_RS15255;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AB69_RS15255;old_locus_tag=AB69_1460 NZ_JHDO01000077.1 Protein Homology CDS 103036 103551 . - 0 ID=cds-WP_000945021.1;Parent=gene-AB69_RS15255;Dbxref=GenBank:WP_000945021.1;Name=WP_000945021.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AB69_RS15255;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945021.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 103562 105088 . - . ID=gene-AB69_RS15250;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AB69_RS15250;old_locus_tag=AB69_1461 NZ_JHDO01000077.1 Protein Homology CDS 103562 105088 . - 0 ID=cds-WP_000062967.1;Parent=gene-AB69_RS15250;Dbxref=GenBank:WP_000062967.1;Name=WP_000062967.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AB69_RS15250;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062967.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 105125 106570 . - . ID=gene-AB69_RS15245;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AB69_RS15245;old_locus_tag=AB69_1462 NZ_JHDO01000077.1 Protein Homology CDS 105125 106570 . - 0 ID=cds-WP_032231063.1;Parent=gene-AB69_RS15245;Dbxref=GenBank:WP_032231063.1;Name=WP_032231063.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AB69_RS15245;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_032231063.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 106570 107880 . - . ID=gene-AB69_RS15240;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AB69_RS15240;old_locus_tag=AB69_1463 NZ_JHDO01000077.1 Protein Homology CDS 106570 107880 . - 0 ID=cds-WP_032231065.1;Parent=gene-AB69_RS15240;Dbxref=GenBank:WP_032231065.1;Name=WP_032231065.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AB69_RS15240;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_032231065.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 108056 108964 . + . ID=gene-AB69_RS15235;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AB69_RS15235;old_locus_tag=AB69_1464 NZ_JHDO01000077.1 Protein Homology CDS 108056 108964 . + 0 ID=cds-WP_032231066.1;Parent=gene-AB69_RS15235;Dbxref=GenBank:WP_032231066.1;Name=WP_032231066.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AB69_RS15235;product=LysR family transcriptional regulator;protein_id=WP_032231066.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 109294 109857 . + . ID=gene-AB69_RS15230;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AB69_RS15230;old_locus_tag=AB69_1465 NZ_JHDO01000077.1 Protein Homology CDS 109294 109857 . + 0 ID=cds-WP_032231069.1;Parent=gene-AB69_RS15230;Dbxref=GenBank:WP_032231069.1;Name=WP_032231069.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AB69_RS15230;product=DNA endonuclease SmrA;protein_id=WP_032231069.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 109878 111110 . - . ID=gene-AB69_RS15225;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AB69_RS15225;old_locus_tag=AB69_1466 NZ_JHDO01000077.1 Protein Homology CDS 109878 111110 . - 0 ID=cds-WP_000628065.1;Parent=gene-AB69_RS15225;Dbxref=GenBank:WP_000628065.1;Name=WP_000628065.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309952.2;locus_tag=AB69_RS15225;product=diguanylate cyclase DgcM;protein_id=WP_000628065.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 111304 111351 . + . ID=gene-AB69_RS30235;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AB69_RS30235 NZ_JHDO01000077.1 Protein Homology CDS 111304 111351 . + 0 ID=cds-WP_211180494.1;Parent=gene-AB69_RS30235;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AB69_RS30235;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 111365 112348 . + . ID=gene-AB69_RS15220;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AB69_RS15220;old_locus_tag=AB69_1467 NZ_JHDO01000077.1 Protein Homology CDS 111365 112348 . + 0 ID=cds-WP_000387388.1;Parent=gene-AB69_RS15220;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AB69_RS15220;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 112623 112796 . + . ID=gene-AB69_RS30570;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AB69_RS30570 NZ_JHDO01000077.1 Protein Homology CDS 112623 112796 . + 0 ID=cds-WP_001296046.1;Parent=gene-AB69_RS30570;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AB69_RS30570;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 112826 114199 . + . ID=gene-AB69_RS15215;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AB69_RS15215;old_locus_tag=AB69_1468 NZ_JHDO01000077.1 Protein Homology CDS 112826 114199 . + 0 ID=cds-WP_000123745.1;Parent=gene-AB69_RS15215;Dbxref=GenBank:WP_000123745.1;Name=WP_000123745.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=AB69_RS15215;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123745.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 114328 115263 . - . ID=gene-AB69_RS15210;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AB69_RS15210;old_locus_tag=AB69_1469 NZ_JHDO01000077.1 Protein Homology CDS 114328 115263 . - 0 ID=cds-WP_001157407.1;Parent=gene-AB69_RS15210;Dbxref=GenBank:WP_001157407.1;Name=WP_001157407.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=AB69_RS15210;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001157407.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 115315 116550 . - . ID=gene-AB69_RS26825;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;locus_tag=AB69_RS26825;old_locus_tag=AB69_1470 NZ_JHDO01000077.1 Protein Homology CDS 115315 116550 . - 0 ID=cds-WP_001684879.1;Parent=gene-AB69_RS26825;Dbxref=GenBank:WP_001684879.1;Name=WP_001684879.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intR;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415861.1;locus_tag=AB69_RS26825;product=tyrosine-type recombinase/integrase;protein_id=WP_001684879.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 116552 116767 . - . ID=gene-AB69_RS15205;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=AB69_RS15205;old_locus_tag=AB69_1471 NZ_JHDO01000077.1 Protein Homology CDS 116552 116767 . - 0 ID=cds-WP_001684880.1;Parent=gene-AB69_RS15205;Dbxref=GenBank:WP_001684880.1;Name=WP_001684880.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309957.2;locus_tag=AB69_RS15205;product=excisionase XisR;protein_id=WP_001684880.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 116867 117055 . - . ID=gene-AB69_RS15200;Name=AB69_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15200;old_locus_tag=AB69_1472 NZ_JHDO01000077.1 Protein Homology CDS 116867 117055 . - 0 ID=cds-WP_001302840.1;Parent=gene-AB69_RS15200;Dbxref=GenBank:WP_001302840.1;Name=WP_001302840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309958.1;locus_tag=AB69_RS15200;product=DUF1187 family protein;protein_id=WP_001302840.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 117048 117242 . - . ID=gene-AB69_RS0124130;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=AB69_RS0124130 NZ_JHDO01000077.1 Protein Homology CDS 117048 117242 . - 0 ID=cds-WP_032194519.1;Parent=gene-AB69_RS0124130;Dbxref=GenBank:WP_032194519.1;Name=WP_032194519.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=AB69_RS0124130;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_032194519.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 117306 118394 . - . ID=gene-AB69_RS15195;Name=AB69_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15195;old_locus_tag=AB69_1473 NZ_JHDO01000077.1 Protein Homology CDS 117306 118394 . - 0 ID=cds-WP_001684881.1;Parent=gene-AB69_RS15195;Dbxref=GenBank:WP_001684881.1;Name=WP_001684881.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001700820.1;locus_tag=AB69_RS15195;product=RecT family recombinase;protein_id=WP_001684881.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 118409 121576 . - . ID=gene-AB69_RS15190;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=AB69_RS15190;old_locus_tag=AB69_1474 NZ_JHDO01000077.1 Protein Homology CDS 118409 121576 . - 0 ID=cds-WP_032231070.1;Parent=gene-AB69_RS15190;Dbxref=GenBank:WP_032231070.1;Name=WP_032231070.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692680.1;locus_tag=AB69_RS15190;product=exodeoxyribonuclease VIII;protein_id=WP_032231070.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 121676 121951 . - . ID=gene-AB69_RS15185;Name=AB69_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15185;old_locus_tag=AB69_1475 NZ_JHDO01000077.1 Protein Homology CDS 121676 121951 . - 0 ID=cds-WP_001409221.1;Parent=gene-AB69_RS15185;Dbxref=GenBank:WP_001409221.1;Name=WP_001409221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415867.1;locus_tag=AB69_RS15185;product=protein racC;protein_id=WP_001409221.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 122026 122196 . - . ID=gene-AB69_RS15180;Name=AB69_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15180;old_locus_tag=AB69_1476 NZ_JHDO01000077.1 Protein Homology CDS 122026 122196 . - 0 ID=cds-WP_001359121.1;Parent=gene-AB69_RS15180;Dbxref=GenBank:WP_001359121.1;Name=WP_001359121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519829.1;locus_tag=AB69_RS15180;product=YdaE family protein;protein_id=WP_001359121.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 122196 122417 . - . ID=gene-AB69_RS15175;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=AB69_RS15175;old_locus_tag=AB69_1477 NZ_JHDO01000077.1 Protein Homology CDS 122196 122417 . - 0 ID=cds-WP_000560226.1;Parent=gene-AB69_RS15175;Dbxref=GenBank:WP_000560226.1;Name=WP_000560226.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707273.1;locus_tag=AB69_RS15175;product=killing protein KilR;protein_id=WP_000560226.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 122826 122978 . - . ID=gene-AB69_RS15170;Name=AB69_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15170;old_locus_tag=AB69_1478 NZ_JHDO01000077.1 Protein Homology CDS 122826 122978 . - 0 ID=cds-WP_000379547.1;Parent=gene-AB69_RS15170;Dbxref=GenBank:WP_000379547.1;Name=WP_000379547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379550.1;locus_tag=AB69_RS15170;product=DUF1391 family protein;protein_id=WP_000379547.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 123284 123703 . - . ID=gene-AB69_RS0124135;Name=AB69_RS0124135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124135 NZ_JHDO01000077.1 Protein Homology CDS 123284 123703 . - 0 ID=cds-WP_000410105.1;Parent=gene-AB69_RS0124135;Dbxref=GenBank:WP_000410105.1;Name=WP_000410105.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410105.1;locus_tag=AB69_RS0124135;product=helix-turn-helix domain-containing protein;protein_id=WP_000410105.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 123868 124314 . + . ID=gene-AB69_RS15165;Name=AB69_RS15165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15165;old_locus_tag=AB69_1480;partial=true;pseudo=true;start_range=.,123868 NZ_JHDO01000077.1 Protein Homology CDS 123868 124314 . + 0 ID=cds-AB69_RS15165;Parent=gene-AB69_RS15165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309102.1;locus_tag=AB69_RS15165;partial=true;product=DUF1627 domain-containing protein;pseudo=true;start_range=.,123868;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 124330 124752 . + . ID=gene-AB69_RS15160;Name=AB69_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15160;old_locus_tag=AB69_1481 NZ_JHDO01000077.1 Protein Homology CDS 124330 124752 . + 0 ID=cds-WP_001151114.1;Parent=gene-AB69_RS15160;Dbxref=GenBank:WP_001151114.1;Name=WP_001151114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309975.1;locus_tag=AB69_RS15160;product=DUF977 family protein;protein_id=WP_001151114.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 124749 125003 . + . ID=gene-AB69_RS15155;Name=AB69_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15155;old_locus_tag=AB69_1482 NZ_JHDO01000077.1 Protein Homology CDS 124749 125003 . + 0 ID=cds-WP_000004329.1;Parent=gene-AB69_RS15155;Dbxref=GenBank:WP_000004329.1;Name=WP_000004329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294161.1;locus_tag=AB69_RS15155;product=hypothetical protein;protein_id=WP_000004329.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 124996 125307 . + . ID=gene-AB69_RS15150;Name=AB69_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15150;old_locus_tag=AB69_1483 NZ_JHDO01000077.1 Protein Homology CDS 124996 125307 . + 0 ID=cds-WP_032231072.1;Parent=gene-AB69_RS15150;Dbxref=GenBank:WP_032231072.1;Name=WP_032231072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310228.1;locus_tag=AB69_RS15150;product=hypothetical protein;protein_id=WP_032231072.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 125613 126185 . + . ID=gene-AB69_RS0124140;Name=AB69_RS0124140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124140 NZ_JHDO01000077.1 Protein Homology CDS 125613 126185 . + 0 ID=cds-WP_001204665.1;Parent=gene-AB69_RS0124140;Dbxref=GenBank:WP_001204665.1;Name=WP_001204665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204665.1;locus_tag=AB69_RS0124140;product=sce7726 family protein;protein_id=WP_001204665.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 126151 127248 . - . ID=gene-AB69_RS15145;Name=AB69_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15145;old_locus_tag=AB69_1485 NZ_JHDO01000077.1 Protein Homology CDS 126151 127248 . - 0 ID=cds-WP_001594014.1;Parent=gene-AB69_RS15145;Dbxref=GenBank:WP_001594014.1;Name=WP_001594014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721311.1;locus_tag=AB69_RS15145;product=beta family protein;protein_id=WP_001594014.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 127805 127960 . + . ID=gene-AB69_RS0124145;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AB69_RS0124145 NZ_JHDO01000077.1 Protein Homology CDS 127805 127960 . + 0 ID=cds-WP_000813254.1-2;Parent=gene-AB69_RS0124145;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB69_RS0124145;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 128236 128448 . + . ID=gene-AB69_RS30715;Name=AB69_RS30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30715 NZ_JHDO01000077.1 Protein Homology CDS 128236 128448 . + 0 ID=cds-WP_307644330.1;Parent=gene-AB69_RS30715;Dbxref=GenBank:WP_307644330.1;Name=WP_307644330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411311.1;locus_tag=AB69_RS30715;product=hypothetical protein;protein_id=WP_307644330.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 128520 129119 . + . ID=gene-AB69_RS15140;Name=AB69_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15140;old_locus_tag=AB69_1486 NZ_JHDO01000077.1 Protein Homology CDS 128520 129119 . + 0 ID=cds-WP_000940329.1;Parent=gene-AB69_RS15140;Dbxref=GenBank:WP_000940329.1;Name=WP_000940329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=AB69_RS15140;product=DUF1367 family protein;protein_id=WP_000940329.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 129119 129409 . + . ID=gene-AB69_RS15135;Name=AB69_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15135;old_locus_tag=AB69_1487 NZ_JHDO01000077.1 Protein Homology CDS 129119 129409 . + 0 ID=cds-WP_000228034.1;Parent=gene-AB69_RS15135;Dbxref=GenBank:WP_000228034.1;Name=WP_000228034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707251.1;locus_tag=AB69_RS15135;product=DUF1364 domain-containing protein;protein_id=WP_000228034.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 129406 129948 . + . ID=gene-AB69_RS15130;Name=AB69_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15130;old_locus_tag=AB69_1488 NZ_JHDO01000077.1 Protein Homology CDS 129406 129948 . + 0 ID=cds-WP_000640134.1;Parent=gene-AB69_RS15130;Dbxref=GenBank:WP_000640134.1;Name=WP_000640134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001502553.1;locus_tag=AB69_RS15130;product=DUF1133 family protein;protein_id=WP_000640134.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 130305 130380 . + . ID=gene-AB69_RS15125;Name=AB69_RS15125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15125;old_locus_tag=AB69_1489 NZ_JHDO01000077.1 tRNAscan-SE tRNA 130305 130380 . + . ID=rna-AB69_RS15125;Parent=gene-AB69_RS15125;anticodon=(pos:130338..130340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15125;product=tRNA-Thr NZ_JHDO01000077.1 tRNAscan-SE exon 130305 130380 . + . ID=exon-AB69_RS15125-1;Parent=rna-AB69_RS15125;anticodon=(pos:130338..130340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15125;product=tRNA-Thr NZ_JHDO01000077.1 RefSeq gene 130384 130458 . + . ID=gene-AB69_RS15120;Name=AB69_RS15120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS15120;old_locus_tag=AB69_1490 NZ_JHDO01000077.1 tRNAscan-SE tRNA 130384 130458 . + . ID=rna-AB69_RS15120;Parent=gene-AB69_RS15120;anticodon=(pos:130417..130419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15120;product=tRNA-Gly NZ_JHDO01000077.1 tRNAscan-SE exon 130384 130458 . + . ID=exon-AB69_RS15120-1;Parent=rna-AB69_RS15120;anticodon=(pos:130417..130419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS15120;product=tRNA-Gly NZ_JHDO01000077.1 RefSeq pseudogene 131031 131457 . + . ID=gene-AB69_RS26835;Name=AB69_RS26835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26835;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 131031 131457 . + 0 ID=cds-AB69_RS26835;Parent=gene-AB69_RS26835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901009.1;locus_tag=AB69_RS26835;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 131454 131606 . + . ID=gene-AB69_RS25755;Name=AB69_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS25755;old_locus_tag=AB69_1493 NZ_JHDO01000077.1 Protein Homology CDS 131454 131606 . + 0 ID=cds-WP_000833653.1;Parent=gene-AB69_RS25755;Dbxref=GenBank:WP_000833653.1;Name=WP_000833653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833649.1;locus_tag=AB69_RS25755;product=DUF3927 family protein;protein_id=WP_000833653.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 131693 132085 . + . ID=gene-AB69_RS15110;Name=AB69_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15110;old_locus_tag=AB69_1494 NZ_JHDO01000077.1 Protein Homology CDS 131693 132085 . + 0 ID=cds-WP_001297664.1;Parent=gene-AB69_RS15110;Dbxref=GenBank:WP_001297664.1;Name=WP_001297664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=AB69_RS15110;product=putative holin;protein_id=WP_001297664.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 132075 132350 . + . ID=gene-AB69_RS15105;Name=AB69_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15105;old_locus_tag=AB69_1495 NZ_JHDO01000077.1 Protein Homology CDS 132075 132350 . + 0 ID=cds-WP_000950577.1;Parent=gene-AB69_RS15105;Dbxref=GenBank:WP_000950577.1;Name=WP_000950577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950483.1;locus_tag=AB69_RS15105;product=phage holin family protein;protein_id=WP_000950577.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 132353 132550 . + . ID=gene-AB69_RS15100;Name=AB69_RS15100;end_range=132550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15100;old_locus_tag=AB69_1496;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 132353 132550 . + 0 ID=cds-AB69_RS15100;Parent=gene-AB69_RS15100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=132550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014543.1;locus_tag=AB69_RS15100;partial=true;product=M15 family metallopeptidase;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 132612 132779 . + . ID=gene-AB69_RS29970;Name=AB69_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29970;old_locus_tag=AB69_1497 NZ_JHDO01000077.1 GeneMarkS-2+ CDS 132612 132779 . + 0 ID=cds-WP_237473674.1;Parent=gene-AB69_RS29970;Dbxref=GenBank:WP_237473674.1;Name=WP_237473674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29970;product=hypothetical protein;protein_id=WP_237473674.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 132930 134090 . + . ID=gene-AB69_RS15090;Name=AB69_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15090;old_locus_tag=AB69_1498 NZ_JHDO01000077.1 Protein Homology CDS 132930 134090 . + 0 ID=cds-WP_000426903.1;Parent=gene-AB69_RS15090;Dbxref=GenBank:WP_000426903.1;Name=WP_000426903.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426903.1;locus_tag=AB69_RS15090;product=type I restriction endonuclease;protein_id=WP_000426903.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 134131 135357 . + . ID=gene-AB69_RS26840;Name=AB69_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26840;old_locus_tag=AB69_1499 NZ_JHDO01000077.1 Protein Homology CDS 134131 135357 . + 0 ID=cds-WP_001290028.1;Parent=gene-AB69_RS26840;Dbxref=GenBank:WP_001290028.1;Name=WP_001290028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290027.1;locus_tag=AB69_RS26840;product=baseplate J/gp47 family protein;protein_id=WP_001290028.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 135341 135967 . + . ID=gene-AB69_RS15085;Name=AB69_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15085;old_locus_tag=AB69_1500 NZ_JHDO01000077.1 Protein Homology CDS 135341 135967 . + 0 ID=cds-WP_001199728.1;Parent=gene-AB69_RS15085;Dbxref=GenBank:WP_001199728.1;Name=WP_001199728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199728.1;locus_tag=AB69_RS15085;product=hypothetical protein;protein_id=WP_001199728.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 135964 137514 . + . ID=gene-AB69_RS15080;Name=AB69_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15080;old_locus_tag=AB69_1501 NZ_JHDO01000077.1 Protein Homology CDS 135964 137514 . + 0 ID=cds-WP_032231074.1;Parent=gene-AB69_RS15080;Dbxref=GenBank:WP_032231074.1;Name=WP_032231074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001409336.1;locus_tag=AB69_RS15080;product=hypothetical protein;protein_id=WP_032231074.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 137528 138058 . + . ID=gene-AB69_RS15075;Name=AB69_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15075;old_locus_tag=AB69_1502 NZ_JHDO01000077.1 Protein Homology CDS 137528 138058 . + 0 ID=cds-WP_001409337.1;Parent=gene-AB69_RS15075;Dbxref=GenBank:WP_001409337.1;Name=WP_001409337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423613.1;locus_tag=AB69_RS15075;product=tail fiber assembly protein;protein_id=WP_001409337.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 138082 139908 . + . ID=gene-AB69_RS15070;Name=AB69_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15070;old_locus_tag=AB69_1503 NZ_JHDO01000077.1 Protein Homology CDS 138082 139908 . + 0 ID=cds-WP_000117759.1;Parent=gene-AB69_RS15070;Dbxref=GenBank:WP_000117759.1;Name=WP_000117759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759033.1;locus_tag=AB69_RS15070;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_000117759.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 139911 140021 . + . ID=gene-AB69_RS30240;Name=AB69_RS30240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30240;partial=true;pseudo=true;start_range=.,139911 NZ_JHDO01000077.1 Protein Homology CDS 139911 140021 . + 0 ID=cds-AB69_RS30240;Parent=gene-AB69_RS30240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701877.1;locus_tag=AB69_RS30240;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,139911;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 140513 140947 . - . ID=gene-AB69_RS15065;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AB69_RS15065;old_locus_tag=AB69_1504 NZ_JHDO01000077.1 Protein Homology CDS 140513 140947 . - 0 ID=cds-WP_001295593.1;Parent=gene-AB69_RS15065;Dbxref=GenBank:WP_001295593.1;Name=WP_001295593.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AB69_RS15065;product=universal stress protein UspF;protein_id=WP_001295593.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 141088 142221 . - . ID=gene-AB69_RS15060;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AB69_RS15060;old_locus_tag=AB69_1505 NZ_JHDO01000077.1 Protein Homology CDS 141088 142221 . - 0 ID=cds-WP_000837924.1;Parent=gene-AB69_RS15060;Dbxref=GenBank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AB69_RS15060;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 142588 146112 . - . ID=gene-AB69_RS15055;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AB69_RS15055;old_locus_tag=AB69_1506 NZ_JHDO01000077.1 Protein Homology CDS 142588 146112 . - 0 ID=cds-WP_032231077.1;Parent=gene-AB69_RS15055;Dbxref=GenBank:WP_032231077.1;Name=WP_032231077.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310027.1;locus_tag=AB69_RS15055;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032231077.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 146386 146652 . + . ID=gene-AB69_RS0124160;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AB69_RS0124160 NZ_JHDO01000077.1 Protein Homology CDS 146386 146652 . + 0 ID=cds-WP_001295715.1;Parent=gene-AB69_RS0124160;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AB69_RS0124160;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 146649 147071 . - . ID=gene-AB69_RS15050;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AB69_RS15050;old_locus_tag=AB69_1508 NZ_JHDO01000077.1 Protein Homology CDS 146649 147071 . - 0 ID=cds-WP_001298828.1;Parent=gene-AB69_RS15050;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AB69_RS15050;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 147182 148171 . - . ID=gene-AB69_RS15045;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AB69_RS15045;old_locus_tag=AB69_1509 NZ_JHDO01000077.1 Protein Homology CDS 147182 148171 . - 0 ID=cds-WP_000762229.1;Parent=gene-AB69_RS15045;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AB69_RS15045;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 148379 151018 . + . ID=gene-AB69_RS15040;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AB69_RS15040;old_locus_tag=AB69_1510 NZ_JHDO01000077.1 Protein Homology CDS 148379 151018 . + 0 ID=cds-WP_032231078.1;Parent=gene-AB69_RS15040;Dbxref=GenBank:WP_032231078.1;Name=WP_032231078.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AB69_RS15040;product=YdbH family protein;protein_id=WP_032231078.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 151015 151200 . + . ID=gene-AB69_RS15035;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AB69_RS15035;old_locus_tag=AB69_1511 NZ_JHDO01000077.1 Protein Homology CDS 151015 151200 . + 0 ID=cds-WP_000698145.1;Parent=gene-AB69_RS15035;Dbxref=GenBank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AB69_RS15035;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 151208 151531 . + . ID=gene-AB69_RS15030;Name=AB69_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15030;old_locus_tag=AB69_1512 NZ_JHDO01000077.1 Protein Homology CDS 151208 151531 . + 0 ID=cds-WP_032231079.1;Parent=gene-AB69_RS15030;Dbxref=GenBank:WP_032231079.1;Name=WP_032231079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523200.1;locus_tag=AB69_RS15030;product=YdbL family protein;protein_id=WP_032231079.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 151933 152445 . + . ID=gene-AB69_RS30845;Name=AB69_RS30845;end_range=152445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30845;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 151933 152445 . + 0 ID=cds-AB69_RS30845;Parent=gene-AB69_RS30845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=152445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310033.1;locus_tag=AB69_RS30845;partial=true;product=surface-exposed virulence protein BigA;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 153316 157878 . + . ID=gene-AB69_RS0124165;Name=AB69_RS0124165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124165;old_locus_tag=AB69_1513;partial=true;pseudo=true;start_range=.,153316 NZ_JHDO01000077.1 Protein Homology CDS 153316 157878 . + 0 ID=cds-AB69_RS0124165;Parent=gene-AB69_RS0124165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AB69_RS0124165;partial=true;product=autotransporter domain-containing protein;pseudo=true;start_range=.,153316;transl_table=11 NZ_JHDO01000077.1 RefSeq gene 158086 158946 . + . ID=gene-AB69_RS15025;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AB69_RS15025;old_locus_tag=AB69_1514 NZ_JHDO01000077.1 Protein Homology CDS 158086 158946 . + 0 ID=cds-WP_032231082.1;Parent=gene-AB69_RS15025;Dbxref=GenBank:WP_032231082.1;Name=WP_032231082.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AB69_RS15025;product=pyridoxine 4-dehydrogenase;protein_id=WP_032231082.1;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 159010 160974 . + . ID=gene-AB69_RS15020;Name=AB69_RS15020;end_range=160974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15020;old_locus_tag=AB69_1515;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 159010 160974 . + 0 ID=cds-AB69_RS15020;Parent=gene-AB69_RS15020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=160974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310036.2;locus_tag=AB69_RS15020;partial=true;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 NZ_JHDO01000077.1 RefSeq pseudogene 161031 161583 . + . ID=gene-AB69_RS28575;Name=AB69_RS28575;end_range=161583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28575;partial=true;pseudo=true NZ_JHDO01000077.1 Protein Homology CDS 161031 161583 . + 0 ID=cds-AB69_RS28575;Parent=gene-AB69_RS28575;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=161583,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28575;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000078.1 1 41748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000078.1 RefSeq region 1 41748 . + . ID=NZ_JHDO01000078.1:1..41748;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000078.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS15010;Name=AB69_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS15010;old_locus_tag=AB69_1517 NZ_JHDO01000078.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-5;Parent=gene-AB69_RS15010;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS15010;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000078.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-5;Parent=gene-AB69_RS15010;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS15010;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000078.1 RefSeq pseudogene 760 1110 . + . ID=gene-AB69_RS26855;Name=AB69_RS26855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26855;partial=true;pseudo=true;start_range=.,760 NZ_JHDO01000078.1 Protein Homology CDS 760 1110 . + 0 ID=cds-AB69_RS26855;Parent=gene-AB69_RS26855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AB69_RS26855;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,760;transl_table=11 NZ_JHDO01000078.1 RefSeq pseudogene 1281 1481 . + . ID=gene-AB69_RS29975;Name=AB69_RS29975;end_range=1481,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29975;partial=true;pseudo=true NZ_JHDO01000078.1 Protein Homology CDS 1281 1481 . + 0 ID=cds-AB69_RS29975;Parent=gene-AB69_RS29975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=AB69_RS29975;partial=true;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 NZ_JHDO01000078.1 RefSeq pseudogene 1467 2945 . + . ID=gene-AB69_RS15005;Name=AB69_RS15005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS15005;old_locus_tag=AB69_1519;partial=true;pseudo=true;start_range=.,1467 NZ_JHDO01000078.1 Protein Homology CDS 1467 2945 . + 0 ID=cds-AB69_RS15005;Parent=gene-AB69_RS15005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707668.1;locus_tag=AB69_RS15005;partial=true;product=class I SAM-dependent methyltransferase family protein;pseudo=true;start_range=.,1467;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 2935 4251 . + . ID=gene-AB69_RS15000;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AB69_RS15000;old_locus_tag=AB69_1520 NZ_JHDO01000078.1 Protein Homology CDS 2935 4251 . + 0 ID=cds-WP_000627378.1;Parent=gene-AB69_RS15000;Dbxref=GenBank:WP_000627378.1;Name=WP_000627378.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AB69_RS15000;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_000627378.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 4302 4907 . - . ID=gene-AB69_RS14995;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AB69_RS14995;old_locus_tag=AB69_1521 NZ_JHDO01000078.1 Protein Homology CDS 4302 4907 . - 0 ID=cds-WP_000048948.1;Parent=gene-AB69_RS14995;Dbxref=GenBank:WP_000048948.1;Name=WP_000048948.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=AB69_RS14995;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048948.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 5108 9010 . + . ID=gene-AB69_RS14990;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AB69_RS14990;old_locus_tag=AB69_1522 NZ_JHDO01000078.1 Protein Homology CDS 5108 9010 . + 0 ID=cds-WP_000139581.1;Parent=gene-AB69_RS14990;Dbxref=GenBank:WP_000139581.1;Name=WP_000139581.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AB69_RS14990;product=ATP-dependent RNA helicase HrpA;protein_id=WP_000139581.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 9282 10082 . + . ID=gene-AB69_RS14985;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AB69_RS14985;old_locus_tag=AB69_1523 NZ_JHDO01000078.1 Protein Homology CDS 9282 10082 . + 0 ID=cds-WP_032231096.1;Parent=gene-AB69_RS14985;Dbxref=GenBank:WP_032231096.1;Name=WP_032231096.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310047.1;locus_tag=AB69_RS14985;product=DUF218 domain-containing protein YdcF;protein_id=WP_032231096.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 10279 11718 . + . ID=gene-AB69_RS14980;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AB69_RS14980;old_locus_tag=AB69_1524 NZ_JHDO01000078.1 Protein Homology CDS 10279 11718 . + 0 ID=cds-WP_032231097.1;Parent=gene-AB69_RS14980;Dbxref=GenBank:WP_032231097.1;Name=WP_032231097.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=AB69_RS14980;product=aldehyde dehydrogenase;protein_id=WP_032231097.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 11760 12761 . - . ID=gene-AB69_RS14975;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AB69_RS14975;old_locus_tag=AB69_1525 NZ_JHDO01000078.1 Protein Homology CDS 11760 12761 . - 0 ID=cds-WP_000048670.1;Parent=gene-AB69_RS14975;Dbxref=GenBank:WP_000048670.1;Name=WP_000048670.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AB69_RS14975;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048670.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 12950 13480 . + . ID=gene-AB69_RS14970;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AB69_RS14970;old_locus_tag=AB69_1526 NZ_JHDO01000078.1 Protein Homology CDS 12950 13480 . + 0 ID=cds-WP_032235686.1;Parent=gene-AB69_RS14970;Dbxref=GenBank:WP_032235686.1;Name=WP_032235686.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AB69_RS14970;product=cytochrome b561;protein_id=WP_032235686.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 13725 13898 . + . ID=gene-AB69_RS14965;Name=AB69_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14965;old_locus_tag=AB69_1527 NZ_JHDO01000078.1 Protein Homology CDS 13725 13898 . + 0 ID=cds-WP_000731833.1;Parent=gene-AB69_RS14965;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AB69_RS14965;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 13924 13992 . + . ID=gene-AB69_RS30245;Name=AB69_RS30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30245 NZ_JHDO01000078.1 Protein Homology CDS 13924 13992 . + 0 ID=cds-WP_212738859.1;Parent=gene-AB69_RS30245;Dbxref=GenBank:WP_212738859.1;Name=WP_212738859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AB69_RS30245;product=hypothetical protein;protein_id=WP_212738859.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 13970 14119 . - . ID=gene-AB69_RS0124175;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AB69_RS0124175 NZ_JHDO01000078.1 Protein Homology CDS 13970 14119 . - 0 ID=cds-WP_001320773.1;Parent=gene-AB69_RS0124175;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AB69_RS0124175;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 14508 16148 . + . ID=gene-AB69_RS14960;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AB69_RS14960;old_locus_tag=AB69_1528 NZ_JHDO01000078.1 Protein Homology CDS 14508 16148 . + 0 ID=cds-WP_001098559.1;Parent=gene-AB69_RS14960;Dbxref=GenBank:WP_001098559.1;Name=WP_001098559.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AB69_RS14960;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098559.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 16186 17109 . - . ID=gene-AB69_RS14955;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AB69_RS14955;old_locus_tag=AB69_1529 NZ_JHDO01000078.1 Protein Homology CDS 16186 17109 . - 0 ID=cds-WP_000414567.1;Parent=gene-AB69_RS14955;Dbxref=GenBank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AB69_RS14955;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414567.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 17326 18669 . + . ID=gene-AB69_RS14950;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AB69_RS14950;old_locus_tag=AB69_1530 NZ_JHDO01000078.1 Protein Homology CDS 17326 18669 . + 0 ID=cds-WP_000013776.1;Parent=gene-AB69_RS14950;Dbxref=GenBank:WP_000013776.1;Name=WP_000013776.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AB69_RS14950;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013776.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 18894 20549 . + . ID=gene-AB69_RS14945;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AB69_RS14945;old_locus_tag=AB69_1531 NZ_JHDO01000078.1 Protein Homology CDS 18894 20549 . + 0 ID=cds-WP_000375956.1;Parent=gene-AB69_RS14945;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AB69_RS14945;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 20689 20913 . + . ID=gene-AB69_RS14940;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AB69_RS14940;old_locus_tag=AB69_1532 NZ_JHDO01000078.1 Protein Homology CDS 20689 20913 . + 0 ID=cds-WP_001296778.1;Parent=gene-AB69_RS14940;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AB69_RS14940;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 20976 21515 . + . ID=gene-AB69_RS14935;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AB69_RS14935;old_locus_tag=AB69_1533 NZ_JHDO01000078.1 Protein Homology CDS 20976 21515 . + 0 ID=cds-WP_001491065.1;Parent=gene-AB69_RS14935;Dbxref=GenBank:WP_001491065.1;Name=WP_001491065.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AB69_RS14935;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_001491065.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 21507 22487 . - . ID=gene-AB69_RS14930;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AB69_RS14930;old_locus_tag=AB69_1534 NZ_JHDO01000078.1 Protein Homology CDS 21507 22487 . - 0 ID=cds-WP_001234063.1;Parent=gene-AB69_RS14930;Dbxref=GenBank:WP_001234063.1;Name=WP_001234063.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AB69_RS14930;product=YdcK family protein;protein_id=WP_001234063.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 22611 23603 . + . ID=gene-AB69_RS14925;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AB69_RS14925;old_locus_tag=AB69_1535 NZ_JHDO01000078.1 Protein Homology CDS 22611 23603 . + 0 ID=cds-WP_001296725.1;Parent=gene-AB69_RS14925;Dbxref=GenBank:WP_001296725.1;Name=WP_001296725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AB69_RS14925;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001296725.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 23600 24193 . + . ID=gene-AB69_RS14920;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AB69_RS14920;old_locus_tag=AB69_1536 NZ_JHDO01000078.1 Protein Homology CDS 23600 24193 . + 0 ID=cds-WP_000586720.1;Parent=gene-AB69_RS14920;Dbxref=GenBank:WP_000586720.1;Name=WP_000586720.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AB69_RS14920;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586720.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 24496 25164 . + . ID=gene-AB69_RS14915;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AB69_RS14915;old_locus_tag=AB69_1538 NZ_JHDO01000078.1 Protein Homology CDS 24496 25164 . + 0 ID=cds-WP_032231101.1;Parent=gene-AB69_RS14915;Dbxref=GenBank:WP_032231101.1;Name=WP_032231101.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AB69_RS14915;product=DUF3313 domain-containing protein;protein_id=WP_032231101.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 25199 26410 . - . ID=gene-AB69_RS14910;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AB69_RS14910;old_locus_tag=AB69_1539 NZ_JHDO01000078.1 Protein Homology CDS 25199 26410 . - 0 ID=cds-WP_071996075.1;Parent=gene-AB69_RS14910;Dbxref=GenBank:WP_071996075.1;Name=WP_071996075.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601493.1;locus_tag=AB69_RS14910;product=BenE family transporter YdcO;protein_id=WP_071996075.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 26463 26999 . + . ID=gene-AB69_RS14905;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AB69_RS14905;old_locus_tag=AB69_1540 NZ_JHDO01000078.1 Protein Homology CDS 26463 26999 . + 0 ID=cds-WP_000429151.1;Parent=gene-AB69_RS14905;Dbxref=GenBank:WP_000429151.1;Name=WP_000429151.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AB69_RS14905;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429151.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 27072 29033 . + . ID=gene-AB69_RS14900;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AB69_RS14900;old_locus_tag=AB69_1541 NZ_JHDO01000078.1 Protein Homology CDS 27072 29033 . + 0 ID=cds-WP_001491066.1;Parent=gene-AB69_RS14900;Dbxref=GenBank:WP_001491066.1;Name=WP_001491066.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AB69_RS14900;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001491066.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 29125 29355 . - . ID=gene-AB69_RS14895;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AB69_RS14895;old_locus_tag=AB69_1542 NZ_JHDO01000078.1 Protein Homology CDS 29125 29355 . - 0 ID=cds-WP_000494244.1;Parent=gene-AB69_RS14895;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AB69_RS14895;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 29577 29753 . + . ID=gene-AB69_RS0124185;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AB69_RS0124185 NZ_JHDO01000078.1 Protein Homology CDS 29577 29753 . + 0 ID=cds-WP_032231106.1;Parent=gene-AB69_RS0124185;Dbxref=GenBank:WP_032231106.1;Name=WP_032231106.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AB69_RS0124185;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_032231106.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 29799 30215 . + . ID=gene-AB69_RS14890;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AB69_RS14890;old_locus_tag=AB69_1544 NZ_JHDO01000078.1 Protein Homology CDS 29799 30215 . + 0 ID=cds-WP_001270286.1;Parent=gene-AB69_RS14890;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AB69_RS14890;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 30294 31700 . + . ID=gene-AB69_RS14885;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AB69_RS14885;old_locus_tag=AB69_1545 NZ_JHDO01000078.1 Protein Homology CDS 30294 31700 . + 0 ID=cds-WP_000760626.1;Parent=gene-AB69_RS14885;Dbxref=GenBank:WP_000760626.1;Name=WP_000760626.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AB69_RS14885;product=PLP-dependent aminotransferase family protein;protein_id=WP_000760626.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 31945 33090 . + . ID=gene-AB69_RS14880;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AB69_RS14880;old_locus_tag=AB69_1546 NZ_JHDO01000078.1 Protein Homology CDS 31945 33090 . + 0 ID=cds-WP_032231107.1;Parent=gene-AB69_RS14880;Dbxref=GenBank:WP_032231107.1;Name=WP_032231107.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AB69_RS14880;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_032231107.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 33108 34121 . + . ID=gene-AB69_RS14875;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AB69_RS14875;old_locus_tag=AB69_1547 NZ_JHDO01000078.1 Protein Homology CDS 33108 34121 . + 0 ID=cds-WP_000220396.1;Parent=gene-AB69_RS14875;Dbxref=GenBank:WP_000220396.1;Name=WP_000220396.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AB69_RS14875;product=ABC transporter ATP-binding protein;protein_id=WP_000220396.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 34122 35063 . + . ID=gene-AB69_RS14870;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AB69_RS14870;old_locus_tag=AB69_1548 NZ_JHDO01000078.1 Protein Homology CDS 34122 35063 . + 0 ID=cds-WP_001251313.1;Parent=gene-AB69_RS14870;Dbxref=GenBank:WP_001251313.1;Name=WP_001251313.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415959.1;locus_tag=AB69_RS14870;product=ABC transporter permease;protein_id=WP_001251313.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 35053 35847 . + . ID=gene-AB69_RS14865;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AB69_RS14865;old_locus_tag=AB69_1549 NZ_JHDO01000078.1 Protein Homology CDS 35053 35847 . + 0 ID=cds-WP_000555458.1;Parent=gene-AB69_RS14865;Dbxref=GenBank:WP_000555458.1;Name=WP_000555458.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AB69_RS14865;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 35869 37293 . + . ID=gene-AB69_RS14860;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AB69_RS14860;old_locus_tag=AB69_1550 NZ_JHDO01000078.1 Protein Homology CDS 35869 37293 . + 0 ID=cds-WP_032231108.1;Parent=gene-AB69_RS14860;Dbxref=GenBank:WP_032231108.1;Name=WP_032231108.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=AB69_RS14860;product=aminobutyraldehyde dehydrogenase;protein_id=WP_032231108.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 37390 37485 . - . ID=gene-AB69_RS26865;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AB69_RS26865 NZ_JHDO01000078.1 Protein Homology CDS 37390 37485 . - 0 ID=cds-WP_001303494.1;Parent=gene-AB69_RS26865;Dbxref=GenBank:WP_001303494.1;Name=WP_001303494.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AB69_RS26865;product=stress response membrane protein YncL;protein_id=WP_001303494.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 37680 37853 . + . ID=gene-AB69_RS0124195;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AB69_RS0124195;old_locus_tag=AB69_1552 NZ_JHDO01000078.1 Protein Homology CDS 37680 37853 . + 0 ID=cds-WP_000061178.1;Parent=gene-AB69_RS0124195;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AB69_RS0124195;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 37939 38172 . + . ID=gene-AB69_RS14855;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AB69_RS14855;old_locus_tag=AB69_1553 NZ_JHDO01000078.1 Protein Homology CDS 37939 38172 . + 0 ID=cds-WP_000018633.1;Parent=gene-AB69_RS14855;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AB69_RS14855;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 38173 38622 . - . ID=gene-AB69_RS14850;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AB69_RS14850;old_locus_tag=AB69_1554 NZ_JHDO01000078.1 Protein Homology CDS 38173 38622 . - 0 ID=cds-WP_001076539.1;Parent=gene-AB69_RS14850;Dbxref=GenBank:WP_001076539.1;Name=WP_001076539.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310078.1;locus_tag=AB69_RS14850;product=DMT family transporter;protein_id=WP_001076539.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 38619 39137 . - . ID=gene-AB69_RS14845;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AB69_RS14845;old_locus_tag=AB69_1555 NZ_JHDO01000078.1 Protein Homology CDS 38619 39137 . - 0 ID=cds-WP_001445699.1;Parent=gene-AB69_RS14845;Dbxref=GenBank:WP_001445699.1;Name=WP_001445699.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AB69_RS14845;product=GNAT family N-acetyltransferase;protein_id=WP_001445699.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 39317 40354 . + . ID=gene-AB69_RS14840;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AB69_RS14840;old_locus_tag=AB69_1556 NZ_JHDO01000078.1 Protein Homology CDS 39317 40354 . + 0 ID=cds-WP_032231109.1;Parent=gene-AB69_RS14840;Dbxref=GenBank:WP_032231109.1;Name=WP_032231109.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AB69_RS14840;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_032231109.1;transl_table=11 NZ_JHDO01000078.1 RefSeq gene 40552 41145 . + . ID=gene-AB69_RS14835;Name=AB69_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14835;old_locus_tag=AB69_1557 NZ_JHDO01000078.1 Protein Homology CDS 40552 41145 . + 0 ID=cds-WP_032231110.1;Parent=gene-AB69_RS14835;Dbxref=GenBank:WP_032231110.1;Name=WP_032231110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310081.2;locus_tag=AB69_RS14835;product=GntR family transcriptional regulator;protein_id=WP_032231110.1;transl_table=11 NZ_JHDO01000078.1 RefSeq pseudogene 41196 41748 . + . ID=gene-AB69_RS28590;Name=AB69_RS28590;end_range=41748,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28590;partial=true;pseudo=true NZ_JHDO01000078.1 Protein Homology CDS 41196 41748 . + 0 ID=cds-AB69_RS28590;Parent=gene-AB69_RS28590;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=41748,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28590;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000079.1 1 5107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000079.1 RefSeq region 1 5107 . + . ID=NZ_JHDO01000079.1:1..5107;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000079.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS14825;Name=AB69_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14825;old_locus_tag=AB69_1559 NZ_JHDO01000079.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-6;Parent=gene-AB69_RS14825;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS14825;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000079.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-6;Parent=gene-AB69_RS14825;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS14825;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000079.1 RefSeq pseudogene 761 898 . + . ID=gene-AB69_RS29980;Name=AB69_RS29980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29980;partial=true;pseudo=true;start_range=.,761 NZ_JHDO01000079.1 Protein Homology CDS 761 898 . + 0 ID=cds-AB69_RS29980;Parent=gene-AB69_RS29980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AB69_RS29980;partial=true;product=fimbrial family protein;pseudo=true;start_range=.,761;transl_table=11 NZ_JHDO01000079.1 RefSeq gene 936 1835 . - . ID=gene-AB69_RS14820;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AB69_RS14820;old_locus_tag=AB69_1560 NZ_JHDO01000079.1 Protein Homology CDS 936 1835 . - 0 ID=cds-WP_001338226.1;Parent=gene-AB69_RS14820;Dbxref=GenBank:WP_001338226.1;Name=WP_001338226.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AB69_RS14820;product=transcriptional activator NhaR;protein_id=WP_001338226.1;transl_table=11 NZ_JHDO01000079.1 RefSeq gene 1901 3067 . - . ID=gene-AB69_RS14815;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AB69_RS14815;old_locus_tag=AB69_1561 NZ_JHDO01000079.1 Protein Homology CDS 1901 3067 . - 0 ID=cds-WP_000681354.1;Parent=gene-AB69_RS14815;Dbxref=GenBank:WP_000681354.1;Name=WP_000681354.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414560.1;locus_tag=AB69_RS14815;product=Na+/H+ antiporter NhaA;protein_id=WP_000681354.1;transl_table=11 NZ_JHDO01000079.1 RefSeq gene 3653 3805 . + . ID=gene-AB69_RS0124200;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AB69_RS0124200 NZ_JHDO01000079.1 Protein Homology CDS 3653 3805 . + 0 ID=cds-WP_000809168.1;Parent=gene-AB69_RS0124200;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AB69_RS0124200;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JHDO01000079.1 RefSeq gene 3883 4995 . + . ID=gene-AB69_RS14810;Name=AB69_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14810;old_locus_tag=AB69_1562 NZ_JHDO01000079.1 Protein Homology CDS 3883 4995 . + 0 ID=cds-WP_001300563.1-4;Parent=gene-AB69_RS14810;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS14810;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDO01000080.1 1 8135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000080.1 RefSeq region 1 8135 . + . ID=NZ_JHDO01000080.1:1..8135;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000080.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS14805;Name=AB69_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14805;old_locus_tag=AB69_1563 NZ_JHDO01000080.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-7;Parent=gene-AB69_RS14805;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS14805;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000080.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-7;Parent=gene-AB69_RS14805;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS14805;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000080.1 RefSeq pseudogene 763 846 . + . ID=gene-AB69_RS28605;Name=AB69_RS28605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28605;partial=true;pseudo=true;start_range=.,763 NZ_JHDO01000080.1 Protein Homology CDS 763 846 . + 0 ID=cds-AB69_RS28605;Parent=gene-AB69_RS28605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310081.2;locus_tag=AB69_RS28605;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,763;transl_table=11 NZ_JHDO01000080.1 RefSeq gene 882 2984 . - . ID=gene-AB69_RS14800;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AB69_RS14800;old_locus_tag=AB69_1564 NZ_JHDO01000080.1 Protein Homology CDS 882 2984 . - 0 ID=cds-WP_032231115.1;Parent=gene-AB69_RS14800;Dbxref=GenBank:WP_032231115.1;Name=WP_032231115.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310082.1;locus_tag=AB69_RS14800;product=TonB-dependent receptor PqqU;protein_id=WP_032231115.1;transl_table=11 NZ_JHDO01000080.1 RefSeq gene 3226 4287 . + . ID=gene-AB69_RS14795;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AB69_RS14795;old_locus_tag=AB69_1566 NZ_JHDO01000080.1 Protein Homology CDS 3226 4287 . + 0 ID=cds-WP_001752482.1;Parent=gene-AB69_RS14795;Dbxref=GenBank:WP_001752482.1;Name=WP_001752482.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AB69_RS14795;product=YncE family protein;protein_id=WP_001752482.1;transl_table=11 NZ_JHDO01000080.1 RefSeq gene 4400 5899 . - . ID=gene-AB69_RS14790;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AB69_RS14790;old_locus_tag=AB69_1567 NZ_JHDO01000080.1 Protein Homology CDS 4400 5899 . - 0 ID=cds-WP_001491068.1;Parent=gene-AB69_RS14790;Dbxref=GenBank:WP_001491068.1;Name=WP_001491068.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AB69_RS14790;product=L-asparagine permease;protein_id=WP_001491068.1;transl_table=11 NZ_JHDO01000080.1 RefSeq gene 6165 6782 . + . ID=gene-AB69_RS14785;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AB69_RS14785;old_locus_tag=AB69_1568 NZ_JHDO01000080.1 Protein Homology CDS 6165 6782 . + 0 ID=cds-WP_032231117.1;Parent=gene-AB69_RS14785;Dbxref=GenBank:WP_032231117.1;Name=WP_032231117.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AB69_RS14785;product=glutathione S-transferase family protein;protein_id=WP_032231117.1;transl_table=11 NZ_JHDO01000080.1 RefSeq gene 6858 7070 . + . ID=gene-AB69_RS0124205;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AB69_RS0124205 NZ_JHDO01000080.1 Protein Homology CDS 6858 7070 . + 0 ID=cds-WP_000226995.1;Parent=gene-AB69_RS0124205;Dbxref=GenBank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AB69_RS0124205;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11 NZ_JHDO01000080.1 RefSeq pseudogene 7798 8135 . + . ID=gene-AB69_RS14780;Name=AB69_RS14780;end_range=8135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS14780;old_locus_tag=AB69_1570;partial=true;pseudo=true;start_range=.,7798 NZ_JHDO01000080.1 Protein Homology CDS 7798 8135 . + 0 ID=cds-AB69_RS14780;Parent=gene-AB69_RS14780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8135,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AB69_RS14780;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7798;transl_table=11 ##sequence-region NZ_JHDO01000081.1 1 18582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000081.1 RefSeq region 1 18582 . + . ID=NZ_JHDO01000081.1:1..18582;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000081.1 RefSeq gene 1 641 . - . ID=gene-AB69_RS14775;Name=AB69_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14775;old_locus_tag=AB69_1571;partial=true;start_range=.,1 NZ_JHDO01000081.1 Protein Homology CDS 1 641 . - 0 ID=cds-WP_001475305.1;Parent=gene-AB69_RS14775;Dbxref=GenBank:WP_001475305.1;Name=WP_001475305.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB69_RS14775;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_001475305.1;start_range=.,1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 1003 3786 . - . ID=gene-AB69_RS14770;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AB69_RS14770;old_locus_tag=AB69_1573 NZ_JHDO01000081.1 Protein Homology CDS 1003 3786 . - 0 ID=cds-WP_001244979.1;Parent=gene-AB69_RS14770;Dbxref=GenBank:WP_001244979.1;Name=WP_001244979.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AB69_RS14770;product=M16 family metallopeptidase;protein_id=WP_001244979.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 3843 6215 . - . ID=gene-AB69_RS14765;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AB69_RS14765;old_locus_tag=AB69_1574 NZ_JHDO01000081.1 Protein Homology CDS 3843 6215 . - 0 ID=cds-WP_000832437.1;Parent=gene-AB69_RS14765;Dbxref=GenBank:WP_000832437.1;Name=WP_000832437.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AB69_RS14765;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_000832437.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 6253 7938 . - . ID=gene-AB69_RS14760;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AB69_RS14760;old_locus_tag=AB69_1575 NZ_JHDO01000081.1 Protein Homology CDS 6253 7938 . - 0 ID=cds-WP_000628576.1;Parent=gene-AB69_RS14760;Dbxref=GenBank:WP_000628576.1;Name=WP_000628576.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AB69_RS14760;product=ABC transporter ATP-binding protein/permease;protein_id=WP_000628576.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 8141 8263 . + . ID=gene-AB69_RS29765;Name=AB69_RS29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29765 NZ_JHDO01000081.1 Protein Homology CDS 8141 8263 . + 0 ID=cds-WP_120795387.1;Parent=gene-AB69_RS29765;Dbxref=GenBank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AB69_RS29765;product=protein YneP;protein_id=WP_120795387.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 8229 9386 . - . ID=gene-AB69_RS14755;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AB69_RS14755;old_locus_tag=AB69_1577 NZ_JHDO01000081.1 Protein Homology CDS 8229 9386 . - 0 ID=cds-WP_001301030.1;Parent=gene-AB69_RS14755;Dbxref=GenBank:WP_001301030.1;Name=WP_001301030.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AB69_RS14755;product=anaerobic sulfatase maturase;protein_id=WP_001301030.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 9438 11120 . - . ID=gene-AB69_RS14750;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AB69_RS14750;old_locus_tag=AB69_1578 NZ_JHDO01000081.1 Protein Homology CDS 9438 11120 . - 0 ID=cds-WP_001295684.1;Parent=gene-AB69_RS14750;Dbxref=GenBank:WP_001295684.1;Name=WP_001295684.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AB69_RS14750;product=sulfatase-like hydrolase/transferase;protein_id=WP_001295684.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 11522 12283 . - . ID=gene-AB69_RS14745;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AB69_RS14745;old_locus_tag=AB69_1579 NZ_JHDO01000081.1 Protein Homology CDS 11522 12283 . - 0 ID=cds-WP_000060492.1;Parent=gene-AB69_RS14745;Dbxref=GenBank:WP_000060492.1;Name=WP_000060492.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416016.1;locus_tag=AB69_RS14745;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060492.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 12358 12555 . - . ID=gene-AB69_RS14740;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AB69_RS14740;old_locus_tag=AB69_1580 NZ_JHDO01000081.1 Protein Homology CDS 12358 12555 . - 0 ID=cds-WP_000543384.1;Parent=gene-AB69_RS14740;Dbxref=GenBank:WP_000543384.1;Name=WP_000543384.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416017.1;locus_tag=AB69_RS14740;product=two-component system connector SafA;protein_id=WP_000543384.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 12803 15082 . - . ID=gene-AB69_RS14735;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AB69_RS14735;old_locus_tag=AB69_1581 NZ_JHDO01000081.1 Protein Homology CDS 12803 15082 . - 0 ID=cds-WP_000726691.1;Parent=gene-AB69_RS14735;Dbxref=GenBank:WP_000726691.1;Name=WP_000726691.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AB69_RS14735;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726691.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 15416 16330 . - . ID=gene-AB69_RS14730;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=AB69_RS14730;old_locus_tag=AB69_1582 NZ_JHDO01000081.1 Protein Homology CDS 15416 16330 . - 0 ID=cds-WP_000520676.1;Parent=gene-AB69_RS14730;Dbxref=GenBank:WP_000520676.1;Name=WP_000520676.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416019.1;locus_tag=AB69_RS14730;product=fimbrial protein;protein_id=WP_000520676.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 16389 16892 . - . ID=gene-AB69_RS14725;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AB69_RS14725;old_locus_tag=AB69_1583 NZ_JHDO01000081.1 Protein Homology CDS 16389 16892 . - 0 ID=cds-WP_000825452.1;Parent=gene-AB69_RS14725;Dbxref=GenBank:WP_000825452.1;Name=WP_000825452.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=AB69_RS14725;product=fimbrial protein;protein_id=WP_000825452.1;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 16905 17435 . - . ID=gene-AB69_RS14720;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=AB69_RS14720;old_locus_tag=AB69_1584 NZ_JHDO01000081.1 Protein Homology CDS 16905 17435 . - 0 ID=cds-WP_000876763.1;Parent=gene-AB69_RS14720;Dbxref=GenBank:WP_000876763.1;Name=WP_000876763.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416021.1;locus_tag=AB69_RS14720;product=fimbrial protein;protein_id=WP_000876763.1;transl_table=11 NZ_JHDO01000081.1 RefSeq pseudogene 17449 18180 . - . ID=gene-AB69_RS0124215;Name=AB69_RS0124215;end_range=18180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124215;old_locus_tag=AB69_1585;partial=true;pseudo=true NZ_JHDO01000081.1 Protein Homology CDS 17449 18180 . - 0 ID=cds-AB69_RS0124215;Parent=gene-AB69_RS0124215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=18180,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AB69_RS0124215;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JHDO01000081.1 RefSeq gene 18274 18582 . + . ID=gene-AB69_RS14715;Name=AB69_RS14715;end_range=18582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14715;old_locus_tag=AB69_1586;partial=true NZ_JHDO01000081.1 Protein Homology CDS 18274 18582 . + 0 ID=cds-WP_032233590.1;Parent=gene-AB69_RS14715;Dbxref=GenBank:WP_032233590.1;Name=WP_032233590.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18582,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS14715;partial=true;product=transposase;protein_id=WP_032233590.1;transl_table=11 ##sequence-region NZ_JHDO01000082.1 1 5428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000082.1 RefSeq region 1 5428 . + . ID=NZ_JHDO01000082.1:1..5428;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000082.1 RefSeq gene 1 287 . + . ID=gene-AB69_RS14710;Name=AB69_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14710;old_locus_tag=AB69_1587;partial=true;start_range=.,1 NZ_JHDO01000082.1 Protein Homology CDS 1 287 . + 2 ID=cds-WP_032235687.1;Parent=gene-AB69_RS14710;Dbxref=GenBank:WP_032235687.1;Name=WP_032235687.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS14710;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235687.1;start_range=.,1;transl_table=11 NZ_JHDO01000082.1 RefSeq pseudogene 299 796 . - . ID=gene-AB69_RS26910;Name=AB69_RS26910;end_range=796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26910;partial=true;pseudo=true;start_range=.,299 NZ_JHDO01000082.1 Protein Homology CDS 299 796 . - 0 ID=cds-AB69_RS26910;Parent=gene-AB69_RS26910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=796,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AB69_RS26910;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,299;transl_table=11 NZ_JHDO01000082.1 RefSeq pseudogene 1053 1261 . - . ID=gene-AB69_RS0124220;Name=AB69_RS0124220;end_range=1261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124220;partial=true;pseudo=true NZ_JHDO01000082.1 Protein Homology CDS 1053 1261 . - 0 ID=cds-AB69_RS0124220;Parent=gene-AB69_RS0124220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677,GO:0003700;end_range=1261,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AB69_RS0124220;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000082.1 RefSeq gene 1983 2984 . + . ID=gene-AB69_RS14705;Name=AB69_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14705;old_locus_tag=AB69_1588 NZ_JHDO01000082.1 GeneMarkS-2+ CDS 1983 2984 . + 0 ID=cds-WP_032231132.1;Parent=gene-AB69_RS14705;Dbxref=GenBank:WP_032231132.1;Name=WP_032231132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS14705;product=hypothetical protein;protein_id=WP_032231132.1;transl_table=11 NZ_JHDO01000082.1 RefSeq gene 3540 4301 . - . ID=gene-AB69_RS14700;Name=AB69_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14700;old_locus_tag=AB69_1589 NZ_JHDO01000082.1 GeneMarkS-2+ CDS 3540 4301 . - 0 ID=cds-WP_032231134.1;Parent=gene-AB69_RS14700;Dbxref=GenBank:WP_032231134.1;Name=WP_032231134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS14700;product=hypothetical protein;protein_id=WP_032231134.1;transl_table=11 NZ_JHDO01000082.1 RefSeq pseudogene 4406 5190 . - . ID=gene-AB69_RS0124225;Name=AB69_RS0124225;end_range=5190,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124225;partial=true;pseudo=true NZ_JHDO01000082.1 Protein Homology CDS 4406 5190 . - 0 ID=cds-AB69_RS0124225;Parent=gene-AB69_RS0124225;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=5190,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612005.1;locus_tag=AB69_RS0124225;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000082.1 RefSeq gene 5203 5428 . - . ID=gene-AB69_RS26915;Name=AB69_RS26915;end_range=5428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26915;partial=true NZ_JHDO01000082.1 Protein Homology CDS 5203 5428 . - 1 ID=cds-WP_113706134.1;Parent=gene-AB69_RS26915;Dbxref=GenBank:WP_113706134.1;Name=WP_113706134.1;Ontology_term=GO:0004803;end_range=5428,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414790.1;locus_tag=AB69_RS26915;partial=true;product=IS30 family transposase;protein_id=WP_113706134.1;transl_table=11 ##sequence-region NZ_JHDO01000083.1 1 39079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000083.1 RefSeq region 1 39079 . + . ID=NZ_JHDO01000083.1:1..39079;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000083.1 RefSeq pseudogene 1 327 . + . ID=gene-AB69_RS0124230;Name=AB69_RS0124230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124230;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000083.1 Protein Homology CDS 1 327 . + 0 ID=cds-AB69_RS0124230;Parent=gene-AB69_RS0124230;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AB69_RS0124230;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000083.1 RefSeq pseudogene 382 501 . - . ID=gene-AB69_RS26925;Name=AB69_RS26925;end_range=501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26925;partial=true;pseudo=true NZ_JHDO01000083.1 Protein Homology CDS 382 501 . - 0 ID=cds-AB69_RS26925;Parent=gene-AB69_RS26925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AB69_RS26925;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_JHDO01000083.1 RefSeq pseudogene 2188 2604 . - . ID=gene-AB69_RS30255;Name=AB69_RS30255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30255;partial=true;pseudo=true;start_range=.,2188 NZ_JHDO01000083.1 Protein Homology CDS 2188 2604 . - 0 ID=cds-AB69_RS30255;Parent=gene-AB69_RS30255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011703756.1;locus_tag=AB69_RS30255;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;start_range=.,2188;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 2662 3261 . - . ID=gene-AB69_RS14690;Name=AB69_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14690;old_locus_tag=AB69_1593 NZ_JHDO01000083.1 Protein Homology CDS 2662 3261 . - 0 ID=cds-WP_001228270.1;Parent=gene-AB69_RS14690;Dbxref=GenBank:WP_001228270.1;Name=WP_001228270.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310969.1;locus_tag=AB69_RS14690;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001228270.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 3329 6724 . - . ID=gene-AB69_RS14685;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AB69_RS14685;old_locus_tag=AB69_1594 NZ_JHDO01000083.1 Protein Homology CDS 3329 6724 . - 0 ID=cds-WP_032231164.1;Parent=gene-AB69_RS14685;Dbxref=GenBank:WP_032231164.1;Name=WP_032231164.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AB69_RS14685;product=phage attachment tail tip protein J;protein_id=WP_032231164.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 6861 7388 . + . ID=gene-AB69_RS14680;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AB69_RS14680;old_locus_tag=AB69_1595 NZ_JHDO01000083.1 Protein Homology CDS 6861 7388 . + 0 ID=cds-WP_032228845.1;Parent=gene-AB69_RS14680;Dbxref=GenBank:WP_032228845.1;Name=WP_032228845.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AB69_RS14680;product=superoxide dismutase family protein;protein_id=WP_032228845.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 7475 8047 . - . ID=gene-AB69_RS14675;Name=AB69_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14675;old_locus_tag=AB69_1596 NZ_JHDO01000083.1 Protein Homology CDS 7475 8047 . - 0 ID=cds-WP_023486420.1;Parent=gene-AB69_RS14675;Dbxref=GenBank:WP_023486420.1;Name=WP_023486420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595790.1;locus_tag=AB69_RS14675;product=tail assembly protein;protein_id=WP_023486420.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 8044 8787 . - . ID=gene-AB69_RS14670;Name=AB69_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14670;old_locus_tag=AB69_1597 NZ_JHDO01000083.1 Protein Homology CDS 8044 8787 . - 0 ID=cds-WP_032231166.1;Parent=gene-AB69_RS14670;Dbxref=GenBank:WP_032231166.1;Name=WP_032231166.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AB69_RS14670;product=C40 family peptidase;protein_id=WP_032231166.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 8793 9491 . - . ID=gene-AB69_RS14665;Name=AB69_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14665;old_locus_tag=AB69_1598 NZ_JHDO01000083.1 Protein Homology CDS 8793 9491 . - 0 ID=cds-WP_032231169.1;Parent=gene-AB69_RS14665;Dbxref=GenBank:WP_032231169.1;Name=WP_032231169.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308866.1;locus_tag=AB69_RS14665;product=phage minor tail protein L;protein_id=WP_032231169.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 9501 9830 . - . ID=gene-AB69_RS14660;Name=AB69_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14660;old_locus_tag=AB69_1599 NZ_JHDO01000083.1 Protein Homology CDS 9501 9830 . - 0 ID=cds-WP_000447253.1;Parent=gene-AB69_RS14660;Dbxref=GenBank:WP_000447253.1;Name=WP_000447253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308865.1;locus_tag=AB69_RS14660;product=phage tail protein;protein_id=WP_000447253.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 9830 12895 . - . ID=gene-AB69_RS14655;Name=AB69_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14655;old_locus_tag=AB69_1600 NZ_JHDO01000083.1 Protein Homology CDS 9830 12895 . - 0 ID=cds-WP_032231170.1;Parent=gene-AB69_RS14655;Dbxref=GenBank:WP_032231170.1;Name=WP_032231170.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308864.1;locus_tag=AB69_RS14655;product=phage tail tape measure protein;protein_id=WP_032231170.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 12867 13196 . - . ID=gene-AB69_RS14650;Name=AB69_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14650;old_locus_tag=AB69_1601 NZ_JHDO01000083.1 Protein Homology CDS 12867 13196 . - 0 ID=cds-WP_032231171.1;Parent=gene-AB69_RS14650;Dbxref=GenBank:WP_032231171.1;Name=WP_032231171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308863.1;locus_tag=AB69_RS14650;product=phage tail assembly protein T;protein_id=WP_032231171.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 13205 13591 . - . ID=gene-AB69_RS14645;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AB69_RS14645;old_locus_tag=AB69_1602 NZ_JHDO01000083.1 Protein Homology CDS 13205 13591 . - 0 ID=cds-WP_001298500.1;Parent=gene-AB69_RS14645;Dbxref=GenBank:WP_001298500.1;Name=WP_001298500.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308862.1;locus_tag=AB69_RS14645;product=phage tail assembly chaperone G;protein_id=WP_001298500.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 13652 14395 . - . ID=gene-AB69_RS14640;Name=AB69_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14640;old_locus_tag=AB69_1603 NZ_JHDO01000083.1 Protein Homology CDS 13652 14395 . - 0 ID=cds-WP_032231172.1;Parent=gene-AB69_RS14640;Dbxref=GenBank:WP_032231172.1;Name=WP_032231172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308861.1;locus_tag=AB69_RS14640;product=phage tail protein;protein_id=WP_032231172.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 14406 14807 . - . ID=gene-AB69_RS14635;Name=AB69_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14635;old_locus_tag=AB69_1604 NZ_JHDO01000083.1 Protein Homology CDS 14406 14807 . - 0 ID=cds-WP_001079398.1;Parent=gene-AB69_RS14635;Dbxref=GenBank:WP_001079398.1;Name=WP_001079398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707741.1;locus_tag=AB69_RS14635;product=phage minor tail U family protein;protein_id=WP_001079398.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 14804 15382 . - . ID=gene-AB69_RS14630;Name=AB69_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14630;old_locus_tag=AB69_1605 NZ_JHDO01000083.1 Protein Homology CDS 14804 15382 . - 0 ID=cds-WP_032231174.1;Parent=gene-AB69_RS14630;Dbxref=GenBank:WP_032231174.1;Name=WP_032231174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308859.1;locus_tag=AB69_RS14630;product=phage tail protein;protein_id=WP_032231174.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 15394 15669 . - . ID=gene-AB69_RS14625;Name=AB69_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14625;old_locus_tag=AB69_1606 NZ_JHDO01000083.1 Protein Homology CDS 15394 15669 . - 0 ID=cds-WP_001283153.1;Parent=gene-AB69_RS14625;Dbxref=GenBank:WP_001283153.1;Name=WP_001283153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308858.1;locus_tag=AB69_RS14625;product=DNA breaking-rejoining protein;protein_id=WP_001283153.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 15662 15985 . - . ID=gene-AB69_RS14620;Name=AB69_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14620;old_locus_tag=AB69_1607 NZ_JHDO01000083.1 Protein Homology CDS 15662 15985 . - 0 ID=cds-WP_001097039.1;Parent=gene-AB69_RS14620;Dbxref=GenBank:WP_001097039.1;Name=WP_001097039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308857.2;locus_tag=AB69_RS14620;product=DUF2190 family protein;protein_id=WP_001097039.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 16072 18099 . - . ID=gene-AB69_RS14615;Name=AB69_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14615;old_locus_tag=AB69_1608 NZ_JHDO01000083.1 Protein Homology CDS 16072 18099 . - 0 ID=cds-WP_148723905.1;Parent=gene-AB69_RS14615;Dbxref=GenBank:WP_148723905.1;Name=WP_148723905.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308856.2;locus_tag=AB69_RS14615;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_148723905.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 18044 19552 . - . ID=gene-AB69_RS14610;Name=AB69_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14610;old_locus_tag=AB69_1609 NZ_JHDO01000083.1 Protein Homology CDS 18044 19552 . - 0 ID=cds-WP_000985957.1;Parent=gene-AB69_RS14610;Dbxref=GenBank:WP_000985957.1;Name=WP_000985957.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310988.1;locus_tag=AB69_RS14610;product=phage portal protein;protein_id=WP_000985957.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 19552 19764 . - . ID=gene-AB69_RS14605;Name=AB69_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14605;old_locus_tag=AB69_1610 NZ_JHDO01000083.1 Protein Homology CDS 19552 19764 . - 0 ID=cds-WP_001072975.1;Parent=gene-AB69_RS14605;Dbxref=GenBank:WP_001072975.1;Name=WP_001072975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072975.1;locus_tag=AB69_RS14605;product=hypothetical protein;protein_id=WP_001072975.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 19761 21863 . - . ID=gene-AB69_RS14600;Name=AB69_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14600;old_locus_tag=AB69_1611 NZ_JHDO01000083.1 Protein Homology CDS 19761 21863 . - 0 ID=cds-WP_032231177.1;Parent=gene-AB69_RS14600;Dbxref=GenBank:WP_032231177.1;Name=WP_032231177.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308852.1;locus_tag=AB69_RS14600;product=phage terminase large subunit family protein;protein_id=WP_032231177.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 21863 22357 . - . ID=gene-AB69_RS14595;Name=AB69_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14595;old_locus_tag=AB69_1612 NZ_JHDO01000083.1 Protein Homology CDS 21863 22357 . - 0 ID=cds-WP_000373426.1;Parent=gene-AB69_RS14595;Dbxref=GenBank:WP_000373426.1;Name=WP_000373426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308851.1;locus_tag=AB69_RS14595;product=DUF1441 family protein;protein_id=WP_000373426.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 22811 23173 . - . ID=gene-AB69_RS14590;Name=AB69_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14590;old_locus_tag=AB69_1614 NZ_JHDO01000083.1 Protein Homology CDS 22811 23173 . - 0 ID=cds-WP_001595003.1;Parent=gene-AB69_RS14590;Dbxref=GenBank:WP_001595003.1;Name=WP_001595003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232224.1;locus_tag=AB69_RS14590;product=hypothetical protein;protein_id=WP_001595003.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 23195 23662 . - . ID=gene-AB69_RS30850;Name=AB69_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30850;old_locus_tag=AB69_1615 NZ_JHDO01000083.1 Protein Homology CDS 23195 23662 . - 0 ID=cds-WP_001529875.1;Parent=gene-AB69_RS30850;Dbxref=GenBank:WP_001529875.1;Name=WP_001529875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082562.1;locus_tag=AB69_RS30850;product=lysis protein;protein_id=WP_001529875.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 23664 23750 . - . ID=gene-AB69_RS30260;Name=AB69_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30260;old_locus_tag=AB69_1616 NZ_JHDO01000083.1 Protein Homology CDS 23664 23750 . - 0 ID=cds-WP_085950722.1;Parent=gene-AB69_RS30260;Dbxref=GenBank:WP_085950722.1;Name=WP_085950722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AB69_RS30260;product=hypothetical protein;protein_id=WP_085950722.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 23931 24074 . - . ID=gene-AB69_RS30265;Name=AB69_RS30265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30265;old_locus_tag=AB69_1618 NZ_JHDO01000083.1 Protein Homology CDS 23931 24074 . - 0 ID=cds-WP_000496062.1;Parent=gene-AB69_RS30265;Dbxref=GenBank:WP_000496062.1;Name=WP_000496062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001718115.1;locus_tag=AB69_RS30265;product=hypothetical protein;protein_id=WP_000496062.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 24365 24898 . - . ID=gene-AB69_RS14580;Name=AB69_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14580;old_locus_tag=AB69_1620 NZ_JHDO01000083.1 Protein Homology CDS 24365 24898 . - 0 ID=cds-WP_001718113.1;Parent=gene-AB69_RS14580;Dbxref=GenBank:WP_001718113.1;Name=WP_001718113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001459769.1;locus_tag=AB69_RS14580;product=lysozyme;protein_id=WP_001718113.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 25004 25276 . + . ID=gene-AB69_RS0124250;Name=AB69_RS0124250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124250 NZ_JHDO01000083.1 Protein Homology CDS 25004 25276 . + 0 ID=cds-WP_000370545.1;Parent=gene-AB69_RS0124250;Dbxref=GenBank:WP_000370545.1;Name=WP_000370545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370550.1;locus_tag=AB69_RS0124250;product=hypothetical protein;protein_id=WP_000370545.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 25242 25586 . - . ID=gene-AB69_RS14575;Name=AB69_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14575;old_locus_tag=AB69_1622 NZ_JHDO01000083.1 Protein Homology CDS 25242 25586 . - 0 ID=cds-WP_001718112.1;Parent=gene-AB69_RS14575;Dbxref=GenBank:WP_001718112.1;Name=WP_001718112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000250557.1;locus_tag=AB69_RS14575;product=YdfR family protein;protein_id=WP_001718112.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 25591 25806 . - . ID=gene-AB69_RS14570;Name=AB69_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14570;old_locus_tag=AB69_1623 NZ_JHDO01000083.1 Protein Homology CDS 25591 25806 . - 0 ID=cds-WP_000839567.1;Parent=gene-AB69_RS14570;Dbxref=GenBank:WP_000839567.1;Name=WP_000839567.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707874.1;locus_tag=AB69_RS14570;product=class II holin family protein;protein_id=WP_000839567.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 26099 26173 . - . ID=gene-AB69_RS14565;Name=AB69_RS14565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS14565;old_locus_tag=AB69_1624 NZ_JHDO01000083.1 tRNAscan-SE tRNA 26099 26173 . - . ID=rna-AB69_RS14565;Parent=gene-AB69_RS14565;anticodon=(pos:complement(26138..26140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14565;product=tRNA-Gly NZ_JHDO01000083.1 tRNAscan-SE exon 26099 26173 . - . ID=exon-AB69_RS14565-1;Parent=rna-AB69_RS14565;anticodon=(pos:complement(26138..26140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14565;product=tRNA-Gly NZ_JHDO01000083.1 RefSeq gene 26177 26252 . - . ID=gene-AB69_RS14560;Name=AB69_RS14560;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS14560;old_locus_tag=AB69_1625 NZ_JHDO01000083.1 tRNAscan-SE tRNA 26177 26252 . - . ID=rna-AB69_RS14560;Parent=gene-AB69_RS14560;anticodon=(pos:complement(26217..26219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14560;product=tRNA-Thr NZ_JHDO01000083.1 tRNAscan-SE exon 26177 26252 . - . ID=exon-AB69_RS14560-1;Parent=rna-AB69_RS14560;anticodon=(pos:complement(26217..26219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14560;product=tRNA-Thr NZ_JHDO01000083.1 RefSeq gene 26255 26331 . - . ID=gene-AB69_RS14555;Name=AB69_RS14555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS14555;old_locus_tag=AB69_1626 NZ_JHDO01000083.1 tRNAscan-SE tRNA 26255 26331 . - . ID=rna-AB69_RS14555;Parent=gene-AB69_RS14555;anticodon=(pos:complement(26295..26297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14555;product=tRNA-Lys NZ_JHDO01000083.1 tRNAscan-SE exon 26255 26331 . - . ID=exon-AB69_RS14555-1;Parent=rna-AB69_RS14555;anticodon=(pos:complement(26295..26297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14555;product=tRNA-Lys NZ_JHDO01000083.1 RefSeq gene 26333 26408 . - . ID=gene-AB69_RS14550;Name=AB69_RS14550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS14550;old_locus_tag=AB69_1627 NZ_JHDO01000083.1 tRNAscan-SE tRNA 26333 26408 . - . ID=rna-AB69_RS14550;Parent=gene-AB69_RS14550;anticodon=(pos:complement(26373..26375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14550;product=tRNA-Ile NZ_JHDO01000083.1 tRNAscan-SE exon 26333 26408 . - . ID=exon-AB69_RS14550-1;Parent=rna-AB69_RS14550;anticodon=(pos:complement(26373..26375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS14550;product=tRNA-Ile NZ_JHDO01000083.1 RefSeq gene 26619 27308 . - . ID=gene-AB69_RS14545;Name=AB69_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14545;old_locus_tag=AB69_1628 NZ_JHDO01000083.1 Protein Homology CDS 26619 27308 . - 0 ID=cds-WP_032231178.1;Parent=gene-AB69_RS14545;Dbxref=GenBank:WP_032231178.1;Name=WP_032231178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310294.1;locus_tag=AB69_RS14545;product=bacteriophage antitermination protein Q;protein_id=WP_032231178.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 27305 27664 . - . ID=gene-AB69_RS14540;Name=AB69_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14540;old_locus_tag=AB69_1629 NZ_JHDO01000083.1 Protein Homology CDS 27305 27664 . - 0 ID=cds-WP_000904174.1;Parent=gene-AB69_RS14540;Dbxref=GenBank:WP_000904174.1;Name=WP_000904174.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310295.1;locus_tag=AB69_RS14540;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000904174.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 27677 28726 . - . ID=gene-AB69_RS14535;Name=AB69_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14535;old_locus_tag=AB69_1630 NZ_JHDO01000083.1 Protein Homology CDS 27677 28726 . - 0 ID=cds-WP_001265281.1;Parent=gene-AB69_RS14535;Dbxref=GenBank:WP_001265281.1;Name=WP_001265281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309803.1;locus_tag=AB69_RS14535;product=DUF968 domain-containing protein;protein_id=WP_001265281.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 28728 29000 . - . ID=gene-AB69_RS26940;Name=AB69_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26940 NZ_JHDO01000083.1 Protein Homology CDS 28728 29000 . - 0 ID=cds-WP_032289145.1;Parent=gene-AB69_RS26940;Dbxref=GenBank:WP_032289145.1;Name=WP_032289145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309802.1;locus_tag=AB69_RS26940;product=hypothetical protein;protein_id=WP_032289145.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 29102 30223 . - . ID=gene-AB69_RS14530;Name=AB69_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14530;old_locus_tag=AB69_1632 NZ_JHDO01000083.1 Protein Homology CDS 29102 30223 . - 0 ID=cds-WP_000481765.1;Parent=gene-AB69_RS14530;Dbxref=GenBank:WP_000481765.1;Name=WP_000481765.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481764.1;locus_tag=AB69_RS14530;product=helix-turn-helix domain-containing protein;protein_id=WP_000481765.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 30234 30827 . - . ID=gene-AB69_RS0124260;Name=AB69_RS0124260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124260 NZ_JHDO01000083.1 Protein Homology CDS 30234 30827 . - 0 ID=cds-WP_001179381.1;Parent=gene-AB69_RS0124260;Dbxref=GenBank:WP_001179381.1;Name=WP_001179381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179380.1;locus_tag=AB69_RS0124260;product=hypothetical protein;protein_id=WP_001179381.1;transl_table=11 NZ_JHDO01000083.1 RefSeq pseudogene 31001 31102 . - . ID=gene-AB69_RS26950;Name=AB69_RS26950;end_range=31102,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS26950;partial=true;pseudo=true NZ_JHDO01000083.1 Protein Homology CDS 31001 31102 . - 0 ID=cds-AB69_RS26950;Parent=gene-AB69_RS26950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;end_range=31102,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB69_RS26950;partial=true;product=Hok/Gef family protein;pseudo=true;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 31278 32324 . - . ID=gene-AB69_RS14525;Name=AB69_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14525;old_locus_tag=AB69_1633 NZ_JHDO01000083.1 Protein Homology CDS 31278 32324 . - 0 ID=cds-WP_000200161.1;Parent=gene-AB69_RS14525;Dbxref=GenBank:WP_000200161.1;Name=WP_000200161.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200161.1;locus_tag=AB69_RS14525;product=ParA family protein;protein_id=WP_000200161.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 32810 33265 . - . ID=gene-AB69_RS14520;Name=AB69_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14520;old_locus_tag=AB69_1634 NZ_JHDO01000083.1 Protein Homology CDS 32810 33265 . - 0 ID=cds-WP_032231182.1;Parent=gene-AB69_RS14520;Dbxref=GenBank:WP_032231182.1;Name=WP_032231182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151206.1;locus_tag=AB69_RS14520;product=DUF977 family protein;protein_id=WP_032231182.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 33306 34376 . - . ID=gene-AB69_RS14515;Name=AB69_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14515;old_locus_tag=AB69_1635 NZ_JHDO01000083.1 Protein Homology CDS 33306 34376 . - 0 ID=cds-WP_032231184.1;Parent=gene-AB69_RS14515;Dbxref=GenBank:WP_032231184.1;Name=WP_032231184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736248.1;locus_tag=AB69_RS14515;product=phage replisome organizer;protein_id=WP_032231184.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 34448 34873 . - . ID=gene-AB69_RS14510;Name=AB69_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14510;old_locus_tag=AB69_1636 NZ_JHDO01000083.1 Protein Homology CDS 34448 34873 . - 0 ID=cds-WP_000693850.1;Parent=gene-AB69_RS14510;Dbxref=GenBank:WP_000693850.1;Name=WP_000693850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309098.1;locus_tag=AB69_RS14510;product=toxin YdaT family protein;protein_id=WP_000693850.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 34857 35099 . - . ID=gene-AB69_RS14505;Name=AB69_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14505;old_locus_tag=AB69_1637 NZ_JHDO01000083.1 Protein Homology CDS 34857 35099 . - 0 ID=cds-WP_000747951.1;Parent=gene-AB69_RS14505;Dbxref=GenBank:WP_000747951.1;Name=WP_000747951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310235.1;locus_tag=AB69_RS14505;product=Cro/CI family transcriptional regulator;protein_id=WP_000747951.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 35491 35829 . + . ID=gene-AB69_RS29775;Name=AB69_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29775 NZ_JHDO01000083.1 Protein Homology CDS 35491 35829 . + 0 ID=cds-WP_001420344.1;Parent=gene-AB69_RS29775;Dbxref=GenBank:WP_001420344.1;Name=WP_001420344.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310236.2;locus_tag=AB69_RS29775;product=LexA family protein;protein_id=WP_001420344.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 36122 36277 . + . ID=gene-AB69_RS14495;Name=AB69_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14495;old_locus_tag=AB69_1639 NZ_JHDO01000083.1 Protein Homology CDS 36122 36277 . + 0 ID=cds-WP_000379575.1;Parent=gene-AB69_RS14495;Dbxref=GenBank:WP_000379575.1;Name=WP_000379575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AB69_RS14495;product=DUF1391 family protein;protein_id=WP_000379575.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 36279 36407 . + . ID=gene-AB69_RS30575;Name=ydfB;gbkey=Gene;gene=ydfB;gene_biotype=protein_coding;locus_tag=AB69_RS30575;old_locus_tag=AB69_1640 NZ_JHDO01000083.1 Protein Homology CDS 36279 36407 . + 0 ID=cds-WP_000344933.1;Parent=gene-AB69_RS30575;Dbxref=GenBank:WP_000344933.1;Name=WP_000344933.1;gbkey=CDS;gene=ydfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344964.1;locus_tag=AB69_RS30575;product=protein YdfB;protein_id=WP_000344933.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 36437 36655 . + . ID=gene-AB69_RS14490;Name=ydfC;gbkey=Gene;gene=ydfC;gene_biotype=protein_coding;locus_tag=AB69_RS14490;old_locus_tag=AB69_1641 NZ_JHDO01000083.1 Protein Homology CDS 36437 36655 . + 0 ID=cds-WP_032231189.1;Parent=gene-AB69_RS14490;Dbxref=GenBank:WP_032231189.1;Name=WP_032231189.1;gbkey=CDS;gene=ydfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416091.1;locus_tag=AB69_RS14490;product=protein YdfC;protein_id=WP_032231189.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 36678 37052 . + . ID=gene-AB69_RS14485;Name=AB69_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14485;old_locus_tag=AB69_1642 NZ_JHDO01000083.1 Protein Homology CDS 36678 37052 . + 0 ID=cds-WP_032231191.1;Parent=gene-AB69_RS14485;Dbxref=GenBank:WP_032231191.1;Name=WP_032231191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405127.1;locus_tag=AB69_RS14485;product=hypothetical protein;protein_id=WP_032231191.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 37042 37263 . - . ID=gene-AB69_RS14480;Name=AB69_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14480;old_locus_tag=AB69_1643 NZ_JHDO01000083.1 Protein Homology CDS 37042 37263 . - 0 ID=cds-WP_000202162.1;Parent=gene-AB69_RS14480;Dbxref=GenBank:WP_000202162.1;Name=WP_000202162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202161.1;locus_tag=AB69_RS14480;product=hypothetical protein;protein_id=WP_000202162.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 37822 38010 . + . ID=gene-AB69_RS14475;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AB69_RS14475;old_locus_tag=AB69_1644 NZ_JHDO01000083.1 Protein Homology CDS 37822 38010 . + 0 ID=cds-WP_000449196.1;Parent=gene-AB69_RS14475;Dbxref=GenBank:WP_000449196.1;Name=WP_000449196.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416092.1;locus_tag=AB69_RS14475;product=cell division inhibition protein DicB;protein_id=WP_000449196.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 38007 38198 . + . ID=gene-AB69_RS14470;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=AB69_RS14470;old_locus_tag=AB69_1645 NZ_JHDO01000083.1 Protein Homology CDS 38007 38198 . + 0 ID=cds-WP_001083273.1;Parent=gene-AB69_RS14470;Dbxref=GenBank:WP_001083273.1;Name=WP_001083273.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416093.1;locus_tag=AB69_RS14470;product=lysis protein YdfD;protein_id=WP_001083273.1;transl_table=11 NZ_JHDO01000083.1 RefSeq gene 38292 39079 . + . ID=gene-AB69_RS14465;Name=AB69_RS14465;end_range=39079,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14465;old_locus_tag=AB69_1646;partial=true NZ_JHDO01000083.1 Protein Homology CDS 38292 39079 . + 0 ID=cds-WP_032235689.1;Parent=gene-AB69_RS14465;Dbxref=GenBank:WP_032235689.1;Name=WP_032235689.1;end_range=39079,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AB69_RS14465;partial=true;product=hypothetical protein;protein_id=WP_032235689.1;transl_table=11 ##sequence-region NZ_JHDO01000084.1 1 269380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000084.1 RefSeq region 1 269380 . + . ID=NZ_JHDO01000084.1:1..269380;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000084.1 RefSeq gene 1 1133 . - . ID=gene-AB69_RS0124270;Name=AB69_RS0124270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124270;old_locus_tag=AB69_1647;partial=true;start_range=.,1 NZ_JHDO01000084.1 Protein Homology CDS 1 1133 . - 0 ID=cds-WP_001254931.1-2;Parent=gene-AB69_RS0124270;Dbxref=GenBank:WP_001254931.1;Name=WP_001254931.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AB69_RS0124270;partial=true;product=IS30-like element IS30 family transposase;protein_id=WP_001254931.1;start_range=.,1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 1201 1458 . - . ID=gene-AB69_RS14460;Name=AB69_RS14460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS14460;old_locus_tag=AB69_1648;partial=true;pseudo=true;start_range=.,1201 NZ_JHDO01000084.1 Protein Homology CDS 1201 1458 . - 0 ID=cds-AB69_RS14460;Parent=gene-AB69_RS14460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AB69_RS14460;partial=true;product=transposase;pseudo=true;start_range=.,1201;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 1513 2100 . + . ID=gene-AB69_RS0124275;Name=AB69_RS0124275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124275;old_locus_tag=AB69_1649 NZ_JHDO01000084.1 Protein Homology CDS 1513 2100 . + 0 ID=cds-WP_050428592.1;Parent=gene-AB69_RS0124275;Dbxref=GenBank:WP_050428592.1;Name=WP_050428592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.6;locus_tag=AB69_RS0124275;product=SDR family oxidoreductase;protein_id=WP_050428592.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 2503 3381 . + . ID=gene-AB69_RS14455;Name=AB69_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14455;old_locus_tag=AB69_1650 NZ_JHDO01000084.1 Protein Homology CDS 2503 3381 . + 0 ID=cds-WP_000769121.1;Parent=gene-AB69_RS14455;Dbxref=GenBank:WP_000769121.1;Name=WP_000769121.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786839.1;locus_tag=AB69_RS14455;product=restriction endonuclease;protein_id=WP_000769121.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 3602 4777 . + . ID=gene-AB69_RS14450;Name=AB69_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14450;old_locus_tag=AB69_1651 NZ_JHDO01000084.1 Protein Homology CDS 3602 4777 . + 0 ID=cds-WP_000992191.1;Parent=gene-AB69_RS14450;Dbxref=GenBank:WP_000992191.1;Name=WP_000992191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992191.1;locus_tag=AB69_RS14450;product=HNH endonuclease;protein_id=WP_000992191.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 4774 6021 . + . ID=gene-AB69_RS14445;Name=AB69_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14445;old_locus_tag=AB69_1652 NZ_JHDO01000084.1 Protein Homology CDS 4774 6021 . + 0 ID=cds-WP_000064266.1;Parent=gene-AB69_RS14445;Dbxref=GenBank:WP_000064266.1;Name=WP_000064266.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064266.1;locus_tag=AB69_RS14445;product=nucleotidyltransferase domain-containing protein;protein_id=WP_000064266.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 6023 7786 . + . ID=gene-AB69_RS14440;Name=AB69_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14440;old_locus_tag=AB69_1653 NZ_JHDO01000084.1 Protein Homology CDS 6023 7786 . + 0 ID=cds-WP_014640894.1;Parent=gene-AB69_RS14440;Dbxref=GenBank:WP_014640894.1;Name=WP_014640894.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640894.1;locus_tag=AB69_RS14440;product=HesA/MoeB/ThiF family protein;protein_id=WP_014640894.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 7783 8280 . + . ID=gene-AB69_RS0124280;Name=AB69_RS0124280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124280 NZ_JHDO01000084.1 Protein Homology CDS 7783 8280 . + 0 ID=cds-WP_001002160.1;Parent=gene-AB69_RS0124280;Dbxref=GenBank:WP_001002160.1;Name=WP_001002160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002160.1;locus_tag=AB69_RS0124280;product=Mov34/MPN/PAD-1 family protein;protein_id=WP_001002160.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 8294 8836 . - . ID=gene-AB69_RS14435;Name=AB69_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14435;old_locus_tag=AB69_1657 NZ_JHDO01000084.1 Protein Homology CDS 8294 8836 . - 0 ID=cds-WP_000994210.1;Parent=gene-AB69_RS14435;Dbxref=GenBank:WP_000994210.1;Name=WP_000994210.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994210.1;locus_tag=AB69_RS14435;product=3'-5' exonuclease;protein_id=WP_000994210.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 9125 9421 . - . ID=gene-AB69_RS26955;Name=AB69_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS26955 NZ_JHDO01000084.1 Protein Homology CDS 9125 9421 . - 0 ID=cds-WP_000379665.1;Parent=gene-AB69_RS26955;Dbxref=GenBank:WP_000379665.1;Name=WP_000379665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740474.1;locus_tag=AB69_RS26955;product=helix-turn-helix domain-containing protein;protein_id=WP_000379665.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 9727 10287 . - . ID=gene-AB69_RS0124285;Name=AB69_RS0124285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124285 NZ_JHDO01000084.1 Protein Homology CDS 9727 10287 . - 0 ID=cds-WP_001088742.1;Parent=gene-AB69_RS0124285;Dbxref=GenBank:WP_001088742.1;Name=WP_001088742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088752.1;locus_tag=AB69_RS0124285;product=hypothetical protein;protein_id=WP_001088742.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 10385 10717 . + . ID=gene-AB69_RS0124290;Name=AB69_RS0124290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124290 NZ_JHDO01000084.1 Protein Homology CDS 10385 10717 . + 0 ID=cds-WP_001446018.1;Parent=gene-AB69_RS0124290;Dbxref=GenBank:WP_001446018.1;Name=WP_001446018.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300511.1;locus_tag=AB69_RS0124290;product=helix-turn-helix domain-containing protein;protein_id=WP_001446018.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 10920 11354 . - . ID=gene-AB69_RS14430;Name=AB69_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14430;old_locus_tag=AB69_1659 NZ_JHDO01000084.1 Protein Homology CDS 10920 11354 . - 0 ID=cds-WP_001214166.1;Parent=gene-AB69_RS14430;Dbxref=GenBank:WP_001214166.1;Name=WP_001214166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564655.1;locus_tag=AB69_RS14430;product=hypothetical protein;protein_id=WP_001214166.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 11354 13720 . - . ID=gene-AB69_RS14425;Name=AB69_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14425;old_locus_tag=AB69_1660 NZ_JHDO01000084.1 Protein Homology CDS 11354 13720 . - 0 ID=cds-WP_000716059.1;Parent=gene-AB69_RS14425;Dbxref=GenBank:WP_000716059.1;Name=WP_000716059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716055.1;locus_tag=AB69_RS14425;product=hypothetical protein;protein_id=WP_000716059.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 13717 15267 . - . ID=gene-AB69_RS14420;Name=AB69_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14420;old_locus_tag=AB69_1661 NZ_JHDO01000084.1 Protein Homology CDS 13717 15267 . - 0 ID=cds-WP_032231139.1;Parent=gene-AB69_RS14420;Dbxref=GenBank:WP_032231139.1;Name=WP_032231139.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078877.1;locus_tag=AB69_RS14420;product=site-specific integrase;protein_id=WP_032231139.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 15251 16651 . - . ID=gene-AB69_RS30275;Name=AB69_RS30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30275;old_locus_tag=AB69_1662 NZ_JHDO01000084.1 Protein Homology CDS 15251 16651 . - 0 ID=cds-WP_001388361.1;Parent=gene-AB69_RS30275;Dbxref=GenBank:WP_001388361.1;Name=WP_001388361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388361.1;locus_tag=AB69_RS30275;product=site-specific integrase;protein_id=WP_001388361.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 16901 18223 . - . ID=gene-AB69_RS14415;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AB69_RS14415;old_locus_tag=AB69_1664 NZ_JHDO01000084.1 Protein Homology CDS 16901 18223 . - 0 ID=cds-WP_001125439.1;Parent=gene-AB69_RS14415;Dbxref=GenBank:WP_001125439.1;Name=WP_001125439.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AB69_RS14415;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125439.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 18223 18489 . - . ID=gene-AB69_RS14410;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AB69_RS14410;old_locus_tag=AB69_1665 NZ_JHDO01000084.1 Protein Homology CDS 18223 18489 . - 0 ID=cds-WP_001301023.1;Parent=gene-AB69_RS14410;Dbxref=GenBank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AB69_RS14410;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001301023.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 18712 24132 . - . ID=gene-AB69_RS14405;Name=AB69_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS14405;old_locus_tag=AB69_1666 NZ_JHDO01000084.1 Protein Homology CDS 18712 24132 . - 0 ID=cds-WP_032231141.1;Parent=gene-AB69_RS14405;Dbxref=GenBank:WP_032231141.1;Name=WP_032231141.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AB69_RS14405;product=ECSE_1600 family autotransporter;protein_id=WP_032231141.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 24663 26255 . - . ID=gene-AB69_RS14400;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AB69_RS14400;old_locus_tag=AB69_1667 NZ_JHDO01000084.1 Protein Homology CDS 24663 26255 . - 0 ID=cds-WP_000113108.1;Parent=gene-AB69_RS14400;Dbxref=GenBank:WP_000113108.1;Name=WP_000113108.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AB69_RS14400;product=autoinducer-2 kinase;protein_id=WP_000113108.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 26334 27287 . - . ID=gene-AB69_RS14395;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AB69_RS14395;old_locus_tag=AB69_1668 NZ_JHDO01000084.1 Protein Homology CDS 26334 27287 . - 0 ID=cds-WP_000154342.1;Parent=gene-AB69_RS14395;Dbxref=GenBank:WP_000154342.1;Name=WP_000154342.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416029.1;locus_tag=AB69_RS14395;product=transcriptional regulator LsrR;protein_id=WP_000154342.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 27536 29071 . + . ID=gene-AB69_RS14390;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AB69_RS14390;old_locus_tag=AB69_1669 NZ_JHDO01000084.1 Protein Homology CDS 27536 29071 . + 0 ID=cds-WP_001194860.1;Parent=gene-AB69_RS14390;Dbxref=GenBank:WP_001194860.1;Name=WP_001194860.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AB69_RS14390;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001194860.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 29065 30093 . + . ID=gene-AB69_RS14385;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AB69_RS14385;old_locus_tag=AB69_1670 NZ_JHDO01000084.1 Protein Homology CDS 29065 30093 . + 0 ID=cds-WP_000911184.1;Parent=gene-AB69_RS14385;Dbxref=GenBank:WP_000911184.1;Name=WP_000911184.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AB69_RS14385;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911184.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 30093 31085 . + . ID=gene-AB69_RS14380;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AB69_RS14380;old_locus_tag=AB69_1671 NZ_JHDO01000084.1 Protein Homology CDS 30093 31085 . + 0 ID=cds-WP_001222721.1;Parent=gene-AB69_RS14380;Dbxref=GenBank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AB69_RS14380;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 31097 32119 . + . ID=gene-AB69_RS14375;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AB69_RS14375;old_locus_tag=AB69_1672 NZ_JHDO01000084.1 Protein Homology CDS 31097 32119 . + 0 ID=cds-WP_000172465.1;Parent=gene-AB69_RS14375;Dbxref=GenBank:WP_000172465.1;Name=WP_000172465.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416033.1;locus_tag=AB69_RS14375;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172465.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 32146 33021 . + . ID=gene-AB69_RS14370;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AB69_RS14370;old_locus_tag=AB69_1673 NZ_JHDO01000084.1 Protein Homology CDS 32146 33021 . + 0 ID=cds-WP_000774165.1;Parent=gene-AB69_RS14370;Dbxref=GenBank:WP_000774165.1;Name=WP_000774165.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416034.1;locus_tag=AB69_RS14370;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774165.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 33045 33335 . + . ID=gene-AB69_RS14365;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AB69_RS14365;old_locus_tag=AB69_1674 NZ_JHDO01000084.1 Protein Homology CDS 33045 33335 . + 0 ID=cds-WP_000558527.1;Parent=gene-AB69_RS14365;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AB69_RS14365;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 33392 34150 . + . ID=gene-AB69_RS14360;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AB69_RS14360;old_locus_tag=AB69_1675 NZ_JHDO01000084.1 Protein Homology CDS 33392 34150 . + 0 ID=cds-WP_001286597.1;Parent=gene-AB69_RS14360;Dbxref=GenBank:WP_001286597.1;Name=WP_001286597.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AB69_RS14360;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 34154 35068 . - . ID=gene-AB69_RS14355;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AB69_RS14355;old_locus_tag=AB69_1676 NZ_JHDO01000084.1 Protein Homology CDS 34154 35068 . - 0 ID=cds-WP_001313828.1;Parent=gene-AB69_RS14355;Dbxref=GenBank:WP_001313828.1;Name=WP_001313828.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AB69_RS14355;product=bestrophin family protein;protein_id=WP_001313828.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 35275 36726 . - . ID=gene-AB69_RS14350;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AB69_RS14350;old_locus_tag=AB69_1677 NZ_JHDO01000084.1 Protein Homology CDS 35275 36726 . - 0 ID=cds-WP_000854633.1;Parent=gene-AB69_RS14350;Dbxref=GenBank:WP_000854633.1;Name=WP_000854633.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AB69_RS14350;product=tagaturonate reductase;protein_id=WP_000854633.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 36953 37939 . - . ID=gene-AB69_RS14345;Name=dgcF;end_range=37939,.;gbkey=Gene;gene=dgcF;gene_biotype=pseudogene;locus_tag=AB69_RS14345;old_locus_tag=AB69_1678;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 36953 37939 . - 0 ID=cds-AB69_RS14345;Parent=gene-AB69_RS14345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0046872,GO:0052621;end_range=37939,.;gbkey=CDS;gene=dgcF;go_function=metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AB69_RS14345;partial=true;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 38012 38371 . - . ID=gene-AB69_RS14340;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AB69_RS14340;old_locus_tag=AB69_1679 NZ_JHDO01000084.1 Protein Homology CDS 38012 38371 . - 0 ID=cds-WP_001191027.1;Parent=gene-AB69_RS14340;Dbxref=GenBank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AB69_RS14340;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 38371 39297 . - . ID=gene-AB69_RS14335;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AB69_RS14335;old_locus_tag=AB69_1680 NZ_JHDO01000084.1 Protein Homology CDS 38371 39297 . - 0 ID=cds-WP_000257409.1;Parent=gene-AB69_RS14335;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AB69_RS14335;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 39361 40749 . - . ID=gene-AB69_RS14330;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AB69_RS14330;old_locus_tag=AB69_1681 NZ_JHDO01000084.1 Protein Homology CDS 39361 40749 . - 0 ID=cds-WP_000156615.1;Parent=gene-AB69_RS14330;Dbxref=GenBank:WP_000156615.1;Name=WP_000156615.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AB69_RS14330;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000156615.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 40850 41731 . + . ID=gene-AB69_RS14325;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AB69_RS14325;old_locus_tag=AB69_1682 NZ_JHDO01000084.1 Protein Homology CDS 40850 41731 . + 0 ID=cds-WP_032231143.1;Parent=gene-AB69_RS14325;Dbxref=GenBank:WP_032231143.1;Name=WP_032231143.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AB69_RS14325;product=putrescine utilization regulator PtrR;protein_id=WP_032231143.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 41809 42924 . + . ID=gene-AB69_RS14320;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AB69_RS14320;old_locus_tag=AB69_1683 NZ_JHDO01000084.1 Protein Homology CDS 41809 42924 . + 0 ID=cds-WP_000258599.1;Parent=gene-AB69_RS14320;Dbxref=GenBank:WP_000258599.1;Name=WP_000258599.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AB69_RS14320;product=putative protein YneK;protein_id=WP_000258599.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 43074 44264 . + . ID=gene-AB69_RS14315;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AB69_RS14315;old_locus_tag=AB69_1685 NZ_JHDO01000084.1 Protein Homology CDS 43074 44264 . + 0 ID=cds-WP_000210799.1;Parent=gene-AB69_RS14315;Dbxref=GenBank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AB69_RS14315;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 44289 44954 . - . ID=gene-AB69_RS14310;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AB69_RS14310;old_locus_tag=AB69_1686 NZ_JHDO01000084.1 Protein Homology CDS 44289 44954 . - 0 ID=cds-WP_000885033.1;Parent=gene-AB69_RS14310;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AB69_RS14310;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 45167 45601 . + . ID=gene-AB69_RS14305;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AB69_RS14305;old_locus_tag=AB69_1687 NZ_JHDO01000084.1 Protein Homology CDS 45167 45601 . + 0 ID=cds-WP_032231144.1;Parent=gene-AB69_RS14305;Dbxref=GenBank:WP_032231144.1;Name=WP_032231144.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416047.4;locus_tag=AB69_RS14305;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_032231144.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 45621 46004 . + . ID=gene-AB69_RS14300;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AB69_RS14300;old_locus_tag=AB69_1688 NZ_JHDO01000084.1 Protein Homology CDS 45621 46004 . + 0 ID=cds-WP_000091199.1;Parent=gene-AB69_RS14300;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AB69_RS14300;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 46036 46254 . + . ID=gene-AB69_RS14295;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AB69_RS14295;old_locus_tag=AB69_1689 NZ_JHDO01000084.1 Protein Homology CDS 46036 46254 . + 0 ID=cds-WP_000803657.1;Parent=gene-AB69_RS14295;Dbxref=GenBank:WP_000803657.1;Name=WP_000803657.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AB69_RS14295;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803657.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 46285 47184 . - . ID=gene-AB69_RS14290;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AB69_RS14290;old_locus_tag=AB69_1690 NZ_JHDO01000084.1 Protein Homology CDS 46285 47184 . - 0 ID=cds-WP_000087187.1;Parent=gene-AB69_RS14290;Dbxref=GenBank:WP_000087187.1;Name=WP_000087187.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416050.4;locus_tag=AB69_RS14290;product=O-acetylserine/cysteine exporter;protein_id=WP_000087187.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 47379 48566 . + . ID=gene-AB69_RS14285;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AB69_RS14285;old_locus_tag=AB69_1691 NZ_JHDO01000084.1 Protein Homology CDS 47379 48566 . + 0 ID=cds-WP_001054183.1;Parent=gene-AB69_RS14285;Dbxref=GenBank:WP_001054183.1;Name=WP_001054183.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AB69_RS14285;product=efflux MFS transporter YdeE;protein_id=WP_001054183.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 48693 48788 . + . ID=gene-AB69_RS0124310;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AB69_RS0124310 NZ_JHDO01000084.1 Protein Homology CDS 48693 48788 . + 0 ID=cds-WP_000901367.1;Parent=gene-AB69_RS0124310;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AB69_RS0124310;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 48788 48892 . + . ID=gene-AB69_RS30280;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AB69_RS30280 NZ_JHDO01000084.1 Protein Homology CDS 48788 48892 . + 0 ID=cds-WP_211180496.1;Parent=gene-AB69_RS30280;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AB69_RS30280;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 49007 49897 . - . ID=gene-AB69_RS14280;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AB69_RS14280;old_locus_tag=AB69_1692 NZ_JHDO01000084.1 Protein Homology CDS 49007 49897 . - 0 ID=cds-WP_032231146.1;Parent=gene-AB69_RS14280;Dbxref=GenBank:WP_032231146.1;Name=WP_032231146.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AB69_RS14280;product=diguanylate cyclase DgcZ;protein_id=WP_032231146.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 50152 50544 . - . ID=gene-AB69_RS14275;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AB69_RS14275;old_locus_tag=AB69_1693 NZ_JHDO01000084.1 Protein Homology CDS 50152 50544 . - 0 ID=cds-WP_000671737.1;Parent=gene-AB69_RS14275;Dbxref=GenBank:WP_000671737.1;Name=WP_000671737.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AB69_RS14275;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671737.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 50820 51338 . + . ID=gene-AB69_RS14270;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AB69_RS14270;old_locus_tag=AB69_1694 NZ_JHDO01000084.1 Protein Homology CDS 50820 51338 . + 0 ID=cds-WP_001024746.1;Parent=gene-AB69_RS14270;Dbxref=GenBank:WP_001024746.1;Name=WP_001024746.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416055.1;locus_tag=AB69_RS14270;product=2-oxo-tetronate isomerase;protein_id=WP_001024746.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 51382 53427 . - . ID=gene-AB69_RS14265;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AB69_RS14265;old_locus_tag=AB69_1695 NZ_JHDO01000084.1 Protein Homology CDS 51382 53427 . - 0 ID=cds-WP_000210373.1;Parent=gene-AB69_RS14265;Dbxref=GenBank:WP_000210373.1;Name=WP_000210373.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416056.1;locus_tag=AB69_RS14265;product=peptidyl-dipeptidase Dcp;protein_id=WP_000210373.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 53564 54310 . + . ID=gene-AB69_RS14260;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AB69_RS14260;old_locus_tag=AB69_1696 NZ_JHDO01000084.1 Protein Homology CDS 53564 54310 . + 0 ID=cds-WP_000636571.1;Parent=gene-AB69_RS14260;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AB69_RS14260;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 54399 55085 . + . ID=gene-AB69_RS14255;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AB69_RS14255;old_locus_tag=AB69_1697 NZ_JHDO01000084.1 Protein Homology CDS 54399 55085 . + 0 ID=cds-WP_000215549.1;Parent=gene-AB69_RS14255;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AB69_RS14255;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 55262 55465 . + . ID=gene-AB69_RS14250;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AB69_RS14250;old_locus_tag=AB69_1698 NZ_JHDO01000084.1 Protein Homology CDS 55262 55465 . + 0 ID=cds-WP_000214712.1;Parent=gene-AB69_RS14250;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AB69_RS14250;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 55500 56960 . - . ID=gene-AB69_RS14245;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AB69_RS14245;old_locus_tag=AB69_1699 NZ_JHDO01000084.1 Protein Homology CDS 55500 56960 . - 0 ID=cds-WP_000527809.1;Parent=gene-AB69_RS14245;Dbxref=GenBank:WP_000527809.1;Name=WP_000527809.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416060.1;locus_tag=AB69_RS14245;product=mannitol dehydrogenase family protein;protein_id=WP_000527809.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 57049 58332 . - . ID=gene-AB69_RS14240;Name=ydfJ;end_range=58332,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AB69_RS14240;old_locus_tag=AB69_1700;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 57049 58332 . - 0 ID=cds-AB69_RS14240;Parent=gene-AB69_RS14240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=58332,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AB69_RS14240;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 58937 59050 . + . ID=gene-AB69_RS29785;Name=ynfT;gbkey=Gene;gene=ynfT;gene_biotype=protein_coding;locus_tag=AB69_RS29785 NZ_JHDO01000084.1 Protein Homology CDS 58937 59050 . + 0 ID=cds-WP_120795384.1;Parent=gene-AB69_RS29785;Dbxref=GenBank:WP_120795384.1;Name=WP_120795384.1;gbkey=CDS;gene=ynfT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=AB69_RS29785;product=YnaM/YnfT family protein;protein_id=WP_120795384.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 59119 59352 . + . ID=gene-AB69_RS0124315;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=AB69_RS0124315;old_locus_tag=AB69_1701 NZ_JHDO01000084.1 Protein Homology CDS 59119 59352 . + 0 ID=cds-WP_032231148.1;Parent=gene-AB69_RS0124315;Dbxref=GenBank:WP_032231148.1;Name=WP_032231148.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=AB69_RS0124315;product=cold shock protein YdfK;protein_id=WP_032231148.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 59669 60259 . + . ID=gene-AB69_RS14235;Name=pinQ;gbkey=Gene;gene=pinQ;gene_biotype=protein_coding;locus_tag=AB69_RS14235;old_locus_tag=AB69_1702 NZ_JHDO01000084.1 Protein Homology CDS 59669 60259 . + 0 ID=cds-WP_000078177.1;Parent=gene-AB69_RS14235;Dbxref=GenBank:WP_000078177.1;Name=WP_000078177.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;gene=pinQ;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416063.1;locus_tag=AB69_RS14235;product=recombinase family protein;protein_id=WP_000078177.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 60357 60932 . - . ID=gene-AB69_RS14230;Name=tfaQ;gbkey=Gene;gene=tfaQ;gene_biotype=protein_coding;locus_tag=AB69_RS14230;old_locus_tag=AB69_1703 NZ_JHDO01000084.1 Protein Homology CDS 60357 60932 . - 0 ID=cds-WP_000885611.1;Parent=gene-AB69_RS14230;Dbxref=GenBank:WP_000885611.1;Name=WP_000885611.1;Ontology_term=GO:0098004;gbkey=CDS;gene=tfaQ;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416064.1;locus_tag=AB69_RS14230;product=tail fiber assembly protein;protein_id=WP_000885611.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 60932 61633 . - . ID=gene-AB69_RS14225;Name=AB69_RS14225;end_range=61633,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS14225;old_locus_tag=AB69_1704;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 60932 61633 . - 0 ID=cds-AB69_RS14225;Parent=gene-AB69_RS14225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=61633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415890.2;locus_tag=AB69_RS14225;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 61888 62130 . - . ID=gene-AB69_RS14220;Name=AB69_RS14220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS14220;old_locus_tag=AB69_1705;partial=true;pseudo=true;start_range=.,61888 NZ_JHDO01000084.1 Protein Homology CDS 61888 62130 . - 0 ID=cds-AB69_RS14220;Parent=gene-AB69_RS14220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=AB69_RS14220;partial=true;product=phage terminase large subunit family protein;pseudo=true;start_range=.,61888;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 62105 62650 . - . ID=gene-AB69_RS14215;Name=nohA;gbkey=Gene;gene=nohA;gene_biotype=protein_coding;locus_tag=AB69_RS14215;old_locus_tag=AB69_1706 NZ_JHDO01000084.1 Protein Homology CDS 62105 62650 . - 0 ID=cds-WP_000453576.1;Parent=gene-AB69_RS14215;Dbxref=GenBank:WP_000453576.1;Name=WP_000453576.1;gbkey=CDS;gene=nohA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=AB69_RS14215;product=DNA-packaging protein;protein_id=WP_000453576.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 63039 63272 . + . ID=gene-AB69_RS0124320;Name=ynfO;gbkey=Gene;gene=ynfO;gene_biotype=protein_coding;locus_tag=AB69_RS0124320;old_locus_tag=AB69_1707 NZ_JHDO01000084.1 Protein Homology CDS 63039 63272 . + 0 ID=cds-WP_001368374.1;Parent=gene-AB69_RS0124320;Dbxref=GenBank:WP_001368374.1;Name=WP_001368374.1;gbkey=CDS;gene=ynfO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AB69_RS0124320;product=YlcI/YnfO family protein;protein_id=WP_001368374.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 63330 63740 . + . ID=gene-AB69_RS0124325;Name=ydfO;gbkey=Gene;gene=ydfO;gene_biotype=protein_coding;locus_tag=AB69_RS0124325 NZ_JHDO01000084.1 Protein Homology CDS 63330 63740 . + 0 ID=cds-WP_000373090.1;Parent=gene-AB69_RS0124325;Dbxref=GenBank:WP_000373090.1;Name=WP_000373090.1;gbkey=CDS;gene=ydfO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416067.2;locus_tag=AB69_RS0124325;product=DUF1398 domain-containing protein;protein_id=WP_000373090.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 63892 64065 . - . ID=gene-AB69_RS14210;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;locus_tag=AB69_RS14210;old_locus_tag=AB69_1708 NZ_JHDO01000084.1 Protein Homology CDS 63892 64065 . - 0 ID=cds-WP_001019606.1;Parent=gene-AB69_RS14210;Dbxref=GenBank:WP_001019606.1;Name=WP_001019606.1;gbkey=CDS;gene=gnsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416068.2;locus_tag=AB69_RS14210;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019606.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 64237 64466 . - . ID=gene-AB69_RS30855;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=pseudogene;locus_tag=AB69_RS30855;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 64237 64466 . - 0 ID=cds-AB69_RS30855;Parent=gene-AB69_RS30855;Note=frameshifted;gbkey=CDS;gene=ynfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720962.1;locus_tag=AB69_RS30855;product=protein YnfN;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 64471 64536 . - . ID=gene-AB69_RS29790;Name=ynfR;gbkey=Gene;gene=ynfR;gene_biotype=protein_coding;locus_tag=AB69_RS29790 NZ_JHDO01000084.1 Protein Homology CDS 64471 64536 . - 0 ID=cds-WP_120795388.1;Parent=gene-AB69_RS29790;Dbxref=GenBank:WP_120795388.1;Name=WP_120795388.1;gbkey=CDS;gene=ynfR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518789.1;locus_tag=AB69_RS29790;product=small protein YnfR;protein_id=WP_120795388.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 64539 64727 . - . ID=gene-AB69_RS26970;Name=ynfQ;gbkey=Gene;gene=ynfQ;gene_biotype=protein_coding;locus_tag=AB69_RS26970 NZ_JHDO01000084.1 Protein Homology CDS 64539 64727 . - 0 ID=cds-WP_071524604.1;Parent=gene-AB69_RS26970;Dbxref=GenBank:WP_071524604.1;Name=WP_071524604.1;gbkey=CDS;gene=ynfQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=AB69_RS26970;product=cold-shock protein;protein_id=WP_071524604.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 64738 64950 . - . ID=gene-AB69_RS14205;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;locus_tag=AB69_RS14205;old_locus_tag=AB69_1709 NZ_JHDO01000084.1 Protein Homology CDS 64738 64950 . - 0 ID=cds-WP_000066495.1;Parent=gene-AB69_RS14205;Dbxref=GenBank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;gene=cspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416070.1;locus_tag=AB69_RS14205;product=cold shock protein CspI;protein_id=WP_000066495.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 65313 65810 . - . ID=gene-AB69_RS14200;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;locus_tag=AB69_RS14200;old_locus_tag=AB69_1711 NZ_JHDO01000084.1 Protein Homology CDS 65313 65810 . - 0 ID=cds-WP_001071769.1;Parent=gene-AB69_RS14200;Dbxref=GenBank:WP_001071769.1;Name=WP_001071769.1;gbkey=CDS;gene=rzpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416071.1;locus_tag=AB69_RS14200;product=DUF2514 domain-containing protein;protein_id=WP_001071769.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 65807 66340 . - . ID=gene-AB69_RS14195;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AB69_RS14195;old_locus_tag=AB69_1712 NZ_JHDO01000084.1 Protein Homology CDS 65807 66340 . - 0 ID=cds-WP_001092971.1;Parent=gene-AB69_RS14195;Dbxref=GenBank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AB69_RS14195;product=lysozyme;protein_id=WP_001092971.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 66337 66648 . - . ID=gene-AB69_RS14190;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;locus_tag=AB69_RS14190;old_locus_tag=AB69_1713 NZ_JHDO01000084.1 Protein Homology CDS 66337 66648 . - 0 ID=cds-WP_032231152.1;Parent=gene-AB69_RS14190;Dbxref=GenBank:WP_032231152.1;Name=WP_032231152.1;gbkey=CDS;gene=ydfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=AB69_RS14190;product=DUF1327 domain-containing protein;protein_id=WP_032231152.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 66653 66868 . - . ID=gene-AB69_RS14185;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AB69_RS14185;old_locus_tag=AB69_1714 NZ_JHDO01000084.1 Protein Homology CDS 66653 66868 . - 0 ID=cds-WP_000839590.1;Parent=gene-AB69_RS14185;Dbxref=GenBank:WP_000839590.1;Name=WP_000839590.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416074.4;locus_tag=AB69_RS14185;product=phage lysis protein EssD;protein_id=WP_000839590.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 67088 67258 . + . ID=gene-AB69_RS30285;Name=ynfU;gbkey=Gene;gene=ynfU;gene_biotype=protein_coding;locus_tag=AB69_RS30285 NZ_JHDO01000084.1 Protein Homology CDS 67088 67258 . + 0 ID=cds-WP_211180497.1;Parent=gene-AB69_RS30285;Dbxref=GenBank:WP_211180497.1;Name=WP_211180497.1;gbkey=CDS;gene=ynfU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051186.1;locus_tag=AB69_RS30285;product=putative zinc-binding protein YnfU;protein_id=WP_211180497.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 67622 67837 . - . ID=gene-AB69_RS14180;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AB69_RS14180;old_locus_tag=AB69_1715 NZ_JHDO01000084.1 Protein Homology CDS 67622 67837 . - 0 ID=cds-WP_000066484.1;Parent=gene-AB69_RS14180;Dbxref=GenBank:WP_000066484.1;Name=WP_000066484.1;gbkey=CDS;gene=cspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416075.1;locus_tag=AB69_RS14180;product=cold shock-like protein CspB;protein_id=WP_000066484.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 68138 68350 . + . ID=gene-AB69_RS14175;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=AB69_RS14175;old_locus_tag=AB69_1716 NZ_JHDO01000084.1 Protein Homology CDS 68138 68350 . + 0 ID=cds-WP_000087756.1;Parent=gene-AB69_RS14175;Dbxref=GenBank:WP_000087756.1;Name=WP_000087756.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416076.1;locus_tag=AB69_RS14175;product=cold shock-like protein CspF;protein_id=WP_000087756.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 68405 68494 . + . ID=gene-AB69_RS29795;Name=AB69_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29795 NZ_JHDO01000084.1 Protein Homology CDS 68405 68494 . + 0 ID=cds-WP_120795389.1;Parent=gene-AB69_RS29795;Dbxref=GenBank:WP_120795389.1;Name=WP_120795389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518791.1;locus_tag=AB69_RS29795;product=hypothetical protein;protein_id=WP_120795389.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 68773 69525 . - . ID=gene-AB69_RS14170;Name=ydfT;gbkey=Gene;gene=ydfT;gene_biotype=protein_coding;locus_tag=AB69_RS14170;old_locus_tag=AB69_1717 NZ_JHDO01000084.1 Protein Homology CDS 68773 69525 . - 0 ID=cds-WP_001047135.1;Parent=gene-AB69_RS14170;Dbxref=GenBank:WP_001047135.1;Name=WP_001047135.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=ydfT;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=AB69_RS14170;product=antitermination protein;protein_id=WP_001047135.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 69539 70261 . - . ID=gene-AB69_RS14165;Name=AB69_RS14165;end_range=70261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS14165;old_locus_tag=AB69_1718;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 69539 70261 . - 0 ID=cds-AB69_RS14165;Parent=gene-AB69_RS14165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=70261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416078.4;locus_tag=AB69_RS14165;partial=true;product=DUF968 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 70517 70768 . - . ID=gene-AB69_RS14160;Name=rem;gbkey=Gene;gene=rem;gene_biotype=protein_coding;locus_tag=AB69_RS14160;old_locus_tag=AB69_1719 NZ_JHDO01000084.1 Protein Homology CDS 70517 70768 . - 0 ID=cds-WP_000980994.1;Parent=gene-AB69_RS14160;Dbxref=GenBank:WP_000980994.1;Name=WP_000980994.1;gbkey=CDS;gene=rem;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416079.1;locus_tag=AB69_RS14160;product=protein Rem;protein_id=WP_000980994.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 70985 71140 . - . ID=gene-AB69_RS0124340;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AB69_RS0124340 NZ_JHDO01000084.1 Protein Homology CDS 70985 71140 . - 0 ID=cds-WP_000813254.1-3;Parent=gene-AB69_RS0124340;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB69_RS0124340;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 71212 71499 . - . ID=gene-AB69_RS0124345;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=AB69_RS0124345 NZ_JHDO01000084.1 Protein Homology CDS 71212 71499 . - 0 ID=cds-WP_000323025.1;Parent=gene-AB69_RS0124345;Dbxref=GenBank:WP_000323025.1;Name=WP_000323025.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416081.1;locus_tag=AB69_RS0124345;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_000323025.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 71499 71738 . - . ID=gene-AB69_RS14155;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=AB69_RS14155;old_locus_tag=AB69_1721 NZ_JHDO01000084.1 Protein Homology CDS 71499 71738 . - 0 ID=cds-WP_000534858.1;Parent=gene-AB69_RS14155;Dbxref=GenBank:WP_000534858.1;Name=WP_000534858.1;gbkey=CDS;gene=relB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416082.1;locus_tag=AB69_RS14155;product=type II toxin-antitoxin system antitoxin RelB;protein_id=WP_000534858.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 71763 72068 . + . ID=gene-AB69_RS26980;Name=ydfV;gbkey=Gene;gene=ydfV;gene_biotype=protein_coding;locus_tag=AB69_RS26980 NZ_JHDO01000084.1 Protein Homology CDS 71763 72068 . + 0 ID=cds-WP_001326990.1;Parent=gene-AB69_RS26980;Dbxref=GenBank:WP_001326990.1;Name=WP_001326990.1;gbkey=CDS;gene=ydfV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416083.1;locus_tag=AB69_RS26980;product=protein YdfV;protein_id=WP_001326990.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 72271 72603 . + . ID=gene-AB69_RS14150;Name=flxA;gbkey=Gene;gene=flxA;gene_biotype=protein_coding;locus_tag=AB69_RS14150;old_locus_tag=AB69_1722 NZ_JHDO01000084.1 Protein Homology CDS 72271 72603 . + 0 ID=cds-WP_001301033.1;Parent=gene-AB69_RS14150;Dbxref=GenBank:WP_001301033.1;Name=WP_001301033.1;gbkey=CDS;gene=flxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416084.1;locus_tag=AB69_RS14150;product=FlxA-like family protein;protein_id=WP_001301033.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 73040 73189 . - . ID=gene-AB69_RS30290;Name=ydfW;gbkey=Gene;gene=ydfW;gene_biotype=protein_coding;locus_tag=AB69_RS30290 NZ_JHDO01000084.1 Protein Homology CDS 73040 73189 . - 0 ID=cds-WP_011443592.1;Parent=gene-AB69_RS30290;Dbxref=GenBank:WP_011443592.1;Name=WP_011443592.1;gbkey=CDS;gene=ydfW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518792.1;locus_tag=AB69_RS30290;product=protein YdfW;protein_id=WP_011443592.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 73859 74104 . - . ID=gene-AB69_RS28635;Name=AB69_RS28635;end_range=74104,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28635;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 73859 74104 . - 0 ID=cds-AB69_RS28635;Parent=gene-AB69_RS28635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=74104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151212.1;locus_tag=AB69_RS28635;partial=true;product=DUF977 family protein;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 74101 74379 . - . ID=gene-AB69_RS28640;Name=ydfX;gbkey=Gene;gene=ydfX;gene_biotype=pseudogene;locus_tag=AB69_RS28640;partial=true;pseudo=true;start_range=.,74101 NZ_JHDO01000084.1 Protein Homology CDS 74101 74379 . - 0 ID=cds-AB69_RS28640;Parent=gene-AB69_RS28640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ydfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309794.1;locus_tag=AB69_RS28640;partial=true;product=protein YdfX;pseudo=true;start_range=.,74101;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 74363 74593 . - . ID=gene-AB69_RS14140;Name=dicC;gbkey=Gene;gene=dicC;gene_biotype=protein_coding;locus_tag=AB69_RS14140;old_locus_tag=AB69_1725 NZ_JHDO01000084.1 Protein Homology CDS 74363 74593 . - 0 ID=cds-WP_000920568.1;Parent=gene-AB69_RS14140;Dbxref=GenBank:WP_000920568.1;Name=WP_000920568.1;gbkey=CDS;gene=dicC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416087.1;locus_tag=AB69_RS14140;product=dicB transcriptional regulator DicC;protein_id=WP_000920568.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 74677 75084 . + . ID=gene-AB69_RS0124360;Name=dicA;gbkey=Gene;gene=dicA;gene_biotype=protein_coding;locus_tag=AB69_RS0124360 NZ_JHDO01000084.1 Protein Homology CDS 74677 75084 . + 0 ID=cds-WP_000448564.1;Parent=gene-AB69_RS0124360;Dbxref=GenBank:WP_000448564.1;Name=WP_000448564.1;gbkey=CDS;gene=dicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416088.1;locus_tag=AB69_RS0124360;product=DNA-binding transcriptional dual regulator DicA;protein_id=WP_000448564.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 75251 75406 . + . ID=gene-AB69_RS14135;Name=ydfA;gbkey=Gene;gene=ydfA;gene_biotype=protein_coding;locus_tag=AB69_RS14135;old_locus_tag=AB69_1726 NZ_JHDO01000084.1 Protein Homology CDS 75251 75406 . + 0 ID=cds-WP_000379575.1-2;Parent=gene-AB69_RS14135;Dbxref=GenBank:WP_000379575.1;Name=WP_000379575.1;gbkey=CDS;gene=ydfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AB69_RS14135;product=DUF1391 family protein;protein_id=WP_000379575.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 75408 75536 . + . ID=gene-AB69_RS30580;Name=ydfB;gbkey=Gene;gene=ydfB;gene_biotype=protein_coding;locus_tag=AB69_RS30580;old_locus_tag=AB69_1727 NZ_JHDO01000084.1 Protein Homology CDS 75408 75536 . + 0 ID=cds-WP_000344964.1;Parent=gene-AB69_RS30580;Dbxref=GenBank:WP_000344964.1;Name=WP_000344964.1;gbkey=CDS;gene=ydfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344964.1;locus_tag=AB69_RS30580;product=protein YdfB;protein_id=WP_000344964.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 75566 75784 . + . ID=gene-AB69_RS14130;Name=ydfC;gbkey=Gene;gene=ydfC;gene_biotype=protein_coding;locus_tag=AB69_RS14130;old_locus_tag=AB69_1728 NZ_JHDO01000084.1 Protein Homology CDS 75566 75784 . + 0 ID=cds-WP_001171942.1;Parent=gene-AB69_RS14130;Dbxref=GenBank:WP_001171942.1;Name=WP_001171942.1;gbkey=CDS;gene=ydfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416091.1;locus_tag=AB69_RS14130;product=protein YdfC;protein_id=WP_001171942.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 76269 76436 . + . ID=gene-AB69_RS0124365;Name=AB69_RS0124365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124365;old_locus_tag=AB69_1731;partial=true;pseudo=true;start_range=.,76269 NZ_JHDO01000084.1 Protein Homology CDS 76269 76436 . + 0 ID=cds-AB69_RS0124365;Parent=gene-AB69_RS0124365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AB69_RS0124365;partial=true;product=site-specific integrase;pseudo=true;start_range=.,76269;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 76624 77643 . - . ID=gene-AB69_RS14125;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AB69_RS14125;old_locus_tag=AB69_1732 NZ_JHDO01000084.1 Protein Homology CDS 76624 77643 . - 0 ID=cds-WP_000836066.1;Parent=gene-AB69_RS14125;Dbxref=GenBank:WP_000836066.1;Name=WP_000836066.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AB69_RS14125;product=Zn-dependent oxidoreductase;protein_id=WP_000836066.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 77655 78869 . - . ID=gene-AB69_RS14120;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AB69_RS14120;old_locus_tag=AB69_1733 NZ_JHDO01000084.1 Protein Homology CDS 77655 78869 . - 0 ID=cds-WP_032231195.1;Parent=gene-AB69_RS14120;Dbxref=GenBank:WP_032231195.1;Name=WP_032231195.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AB69_RS14120;product=starvation-sensing protein RspA;protein_id=WP_032231195.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 79075 79401 . - . ID=gene-AB69_RS14115;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AB69_RS14115;old_locus_tag=AB69_1734 NZ_JHDO01000084.1 Protein Homology CDS 79075 79401 . - 0 ID=cds-WP_000598292.1;Parent=gene-AB69_RS14115;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AB69_RS14115;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 79536 79877 . + . ID=gene-AB69_RS14110;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AB69_RS14110;old_locus_tag=AB69_1735 NZ_JHDO01000084.1 Protein Homology CDS 79536 79877 . + 0 ID=cds-WP_000705211.1;Parent=gene-AB69_RS14110;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AB69_RS14110;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 79912 80472 . + . ID=gene-AB69_RS14105;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AB69_RS14105;old_locus_tag=AB69_1736 NZ_JHDO01000084.1 Protein Homology CDS 79912 80472 . + 0 ID=cds-WP_001138581.1;Parent=gene-AB69_RS14105;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AB69_RS14105;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 80475 81185 . - . ID=gene-AB69_RS14100;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AB69_RS14100;old_locus_tag=AB69_1737 NZ_JHDO01000084.1 Protein Homology CDS 80475 81185 . - 0 ID=cds-WP_001321287.1;Parent=gene-AB69_RS14100;Dbxref=GenBank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AB69_RS14100;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 81293 81598 . + . ID=gene-AB69_RS14095;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AB69_RS14095;old_locus_tag=AB69_1738 NZ_JHDO01000084.1 Protein Homology CDS 81293 81598 . + 0 ID=cds-WP_001300836.1;Parent=gene-AB69_RS14095;Dbxref=GenBank:WP_001300836.1;Name=WP_001300836.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416103.2;locus_tag=AB69_RS14095;product=DUF1161 domain-containing protein;protein_id=WP_001300836.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 81797 84223 . + . ID=gene-AB69_RS14090;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AB69_RS14090;old_locus_tag=AB69_1739 NZ_JHDO01000084.1 Protein Homology CDS 81797 84223 . + 0 ID=cds-WP_000041675.1;Parent=gene-AB69_RS14090;Dbxref=GenBank:WP_000041675.1;Name=WP_000041675.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AB69_RS14090;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_000041675.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 84284 86707 . + . ID=gene-AB69_RS14085;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AB69_RS14085;old_locus_tag=AB69_1740 NZ_JHDO01000084.1 Protein Homology CDS 84284 86707 . + 0 ID=cds-WP_072645730.1;Parent=gene-AB69_RS14085;Dbxref=GenBank:WP_072645730.1;Name=WP_072645730.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AB69_RS14085;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_072645730.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 86718 87335 . + . ID=gene-AB69_RS14080;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AB69_RS14080;old_locus_tag=AB69_1741 NZ_JHDO01000084.1 Protein Homology CDS 86718 87335 . + 0 ID=cds-WP_000213028.1;Parent=gene-AB69_RS14080;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB69_RS14080;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 87337 88191 . + . ID=gene-AB69_RS14075;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AB69_RS14075;old_locus_tag=AB69_1742 NZ_JHDO01000084.1 Protein Homology CDS 87337 88191 . + 0 ID=cds-WP_032231196.1;Parent=gene-AB69_RS14075;Dbxref=GenBank:WP_032231196.1;Name=WP_032231196.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AB69_RS14075;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_032231196.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 88234 88848 . + . ID=gene-AB69_RS14070;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AB69_RS14070;old_locus_tag=AB69_1743 NZ_JHDO01000084.1 Protein Homology CDS 88234 88848 . + 0 ID=cds-WP_000148710.1;Parent=gene-AB69_RS14070;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AB69_RS14070;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 89007 90299 . + . ID=gene-AB69_RS14065;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AB69_RS14065;old_locus_tag=AB69_1744 NZ_JHDO01000084.1 Protein Homology CDS 89007 90299 . + 0 ID=cds-WP_001315626.1;Parent=gene-AB69_RS14065;Dbxref=GenBank:WP_001315626.1;Name=WP_001315626.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AB69_RS14065;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001315626.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 90252 90947 . - . ID=gene-AB69_RS14060;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB69_RS14060;old_locus_tag=AB69_1745 NZ_JHDO01000084.1 Protein Homology CDS 90252 90947 . - 0 ID=cds-WP_000919231.1;Parent=gene-AB69_RS14060;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AB69_RS14060;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 91072 92292 . - . ID=gene-AB69_RS14055;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AB69_RS14055;old_locus_tag=AB69_1746 NZ_JHDO01000084.1 Protein Homology CDS 91072 92292 . - 0 ID=cds-WP_000225262.1;Parent=gene-AB69_RS14055;Dbxref=GenBank:WP_000225262.1;Name=WP_000225262.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416111.1;locus_tag=AB69_RS14055;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225262.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 92427 93320 . - . ID=gene-AB69_RS14050;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AB69_RS14050;old_locus_tag=AB69_1747 NZ_JHDO01000084.1 Protein Homology CDS 92427 93320 . - 0 ID=cds-WP_001019525.1;Parent=gene-AB69_RS14050;Dbxref=GenBank:WP_001019525.1;Name=WP_001019525.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416112.1;locus_tag=AB69_RS14050;product=LysR family transcriptional regulator;protein_id=WP_001019525.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 93427 94680 . + . ID=gene-AB69_RS14045;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AB69_RS14045;old_locus_tag=AB69_1748 NZ_JHDO01000084.1 Protein Homology CDS 93427 94680 . + 0 ID=cds-WP_000091840.1;Parent=gene-AB69_RS14045;Dbxref=GenBank:WP_000091840.1;Name=WP_000091840.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AB69_RS14045;product=MFS transporter;protein_id=WP_000091840.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 94729 94848 . - . ID=gene-AB69_RS30860;Name=AB69_RS30860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30860;old_locus_tag=AB69_1749 NZ_JHDO01000084.1 Protein Homology CDS 94729 94848 . - 0 ID=cds-WP_001299090.1;Parent=gene-AB69_RS30860;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AB69_RS30860;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 95104 95412 . + . ID=gene-AB69_RS14040;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AB69_RS14040;old_locus_tag=AB69_1750 NZ_JHDO01000084.1 Protein Homology CDS 95104 95412 . + 0 ID=cds-WP_212592195.1;Parent=gene-AB69_RS14040;Dbxref=GenBank:WP_212592195.1;Name=WP_212592195.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416114.2;locus_tag=AB69_RS14040;product=acid resistance repetitive basic protein Asr;protein_id=WP_212592195.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 95505 95588 . + . ID=gene-AB69_RS0124370;Name=AB69_RS0124370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124370 NZ_JHDO01000084.1 Protein Homology CDS 95505 95588 . + 0 ID=cds-WP_000233090.1;Parent=gene-AB69_RS0124370;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AB69_RS0124370;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 95688 96509 . + . ID=gene-AB69_RS14035;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AB69_RS14035;old_locus_tag=AB69_1751 NZ_JHDO01000084.1 Protein Homology CDS 95688 96509 . + 0 ID=cds-WP_032231200.1;Parent=gene-AB69_RS14035;Dbxref=GenBank:WP_032231200.1;Name=WP_032231200.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416115.1;locus_tag=AB69_RS14035;product=trypsin-like serine peptidase;protein_id=WP_032231200.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 96548 96877 . - . ID=gene-AB69_RS14030;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AB69_RS14030;old_locus_tag=AB69_1752 NZ_JHDO01000084.1 Protein Homology CDS 96548 96877 . - 0 ID=cds-WP_000046661.1;Parent=gene-AB69_RS14030;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AB69_RS14030;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 96864 97229 . - . ID=gene-AB69_RS14025;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AB69_RS14025;old_locus_tag=AB69_1753 NZ_JHDO01000084.1 Protein Homology CDS 96864 97229 . - 0 ID=cds-WP_000276149.1;Parent=gene-AB69_RS14025;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AB69_RS14025;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 97336 97506 . - . ID=gene-AB69_RS30865;Name=AB69_RS30865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30865 NZ_JHDO01000084.1 Protein Homology CDS 97336 97506 . - 0 ID=cds-WP_001303517.1;Parent=gene-AB69_RS30865;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AB69_RS30865;product=hypothetical protein;protein_id=WP_001303517.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 97641 98675 . + . ID=gene-AB69_RS14020;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AB69_RS14020;old_locus_tag=AB69_1754 NZ_JHDO01000084.1 Protein Homology CDS 97641 98675 . + 0 ID=cds-WP_001118241.1;Parent=gene-AB69_RS14020;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AB69_RS14020;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 98700 100088 . - . ID=gene-AB69_RS14015;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AB69_RS14015;old_locus_tag=AB69_1755 NZ_JHDO01000084.1 Protein Homology CDS 98700 100088 . - 0 ID=cds-WP_032231201.1;Parent=gene-AB69_RS14015;Dbxref=GenBank:WP_032231201.1;Name=WP_032231201.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AB69_RS14015;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_032231201.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 100099 101631 . - . ID=gene-AB69_RS14010;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AB69_RS14010;old_locus_tag=AB69_1756 NZ_JHDO01000084.1 Protein Homology CDS 100099 101631 . - 0 ID=cds-WP_001300486.1;Parent=gene-AB69_RS14010;Dbxref=GenBank:WP_001300486.1;Name=WP_001300486.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AB69_RS14010;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 102155 103099 . + . ID=gene-AB69_RS14005;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AB69_RS14005;old_locus_tag=AB69_1757 NZ_JHDO01000084.1 Protein Homology CDS 102155 103099 . + 0 ID=cds-WP_000769322.1;Parent=gene-AB69_RS14005;Dbxref=GenBank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AB69_RS14005;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 103285 104667 . + . ID=gene-AB69_RS14000;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AB69_RS14000;old_locus_tag=AB69_1758 NZ_JHDO01000084.1 Protein Homology CDS 103285 104667 . + 0 ID=cds-WP_000412379.1;Parent=gene-AB69_RS14000;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AB69_RS14000;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 104704 105426 . + . ID=gene-AB69_RS13995;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AB69_RS13995;old_locus_tag=AB69_1759 NZ_JHDO01000084.1 Protein Homology CDS 104704 105426 . + 0 ID=cds-WP_000520804.1;Parent=gene-AB69_RS13995;Dbxref=GenBank:WP_000520804.1;Name=WP_000520804.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AB69_RS13995;product=dihydromonapterin reductase;protein_id=WP_000520804.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 105423 105758 . - . ID=gene-AB69_RS13990;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AB69_RS13990;old_locus_tag=AB69_1760 NZ_JHDO01000084.1 Protein Homology CDS 105423 105758 . - 0 ID=cds-WP_000524868.1;Parent=gene-AB69_RS13990;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AB69_RS13990;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 105887 106606 . + . ID=gene-AB69_RS13985;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AB69_RS13985;old_locus_tag=AB69_1761 NZ_JHDO01000084.1 Protein Homology CDS 105887 106606 . + 0 ID=cds-WP_001092508.1;Parent=gene-AB69_RS13985;Dbxref=GenBank:WP_001092508.1;Name=WP_001092508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AB69_RS13985;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 106610 107911 . + . ID=gene-AB69_RS13980;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AB69_RS13980;old_locus_tag=AB69_1762 NZ_JHDO01000084.1 Protein Homology CDS 106610 107911 . + 0 ID=cds-WP_000732512.1;Parent=gene-AB69_RS13980;Dbxref=GenBank:WP_000732512.1;Name=WP_000732512.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AB69_RS13980;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732512.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 107987 108916 . + . ID=gene-AB69_RS13975;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AB69_RS13975;old_locus_tag=AB69_1763 NZ_JHDO01000084.1 Protein Homology CDS 107987 108916 . + 0 ID=cds-WP_000135181.1;Parent=gene-AB69_RS13975;Dbxref=GenBank:WP_000135181.1;Name=WP_000135181.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416127.1;locus_tag=AB69_RS13975;product=DNA replication terminus site-binding protein;protein_id=WP_000135181.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 108913 110316 . - . ID=gene-AB69_RS13970;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AB69_RS13970;old_locus_tag=AB69_1764 NZ_JHDO01000084.1 Protein Homology CDS 108913 110316 . - 0 ID=cds-WP_001099085.1;Parent=gene-AB69_RS13970;Dbxref=GenBank:WP_001099085.1;Name=WP_001099085.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416128.1;locus_tag=AB69_RS13970;product=class II fumarate hydratase;protein_id=WP_001099085.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 110459 112105 . - . ID=gene-AB69_RS13965;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB69_RS13965;old_locus_tag=AB69_1765 NZ_JHDO01000084.1 Protein Homology CDS 110459 112105 . - 0 ID=cds-WP_032231202.1;Parent=gene-AB69_RS13965;Dbxref=GenBank:WP_032231202.1;Name=WP_032231202.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AB69_RS13965;product=class I fumarate hydratase;protein_id=WP_032231202.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 112304 113479 . + . ID=gene-AB69_RS13960;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AB69_RS13960;old_locus_tag=AB69_1766 NZ_JHDO01000084.1 Protein Homology CDS 112304 113479 . + 0 ID=cds-WP_001170664.1;Parent=gene-AB69_RS13960;Dbxref=GenBank:WP_001170664.1;Name=WP_001170664.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AB69_RS13960;product=mannose-6-phosphate isomerase;protein_id=WP_001170664.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 113580 115088 . + . ID=gene-AB69_RS13955;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AB69_RS13955;old_locus_tag=AB69_1767 NZ_JHDO01000084.1 Protein Homology CDS 113580 115088 . + 0 ID=cds-WP_001043339.1;Parent=gene-AB69_RS13955;Dbxref=GenBank:WP_001043339.1;Name=WP_001043339.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AB69_RS13955;product=YdgA family protein;protein_id=WP_001043339.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 115314 116579 . - . ID=gene-AB69_RS13950;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AB69_RS13950;old_locus_tag=AB69_1768 NZ_JHDO01000084.1 Protein Homology CDS 115314 116579 . - 0 ID=cds-WP_001227023.1;Parent=gene-AB69_RS13950;Dbxref=GenBank:WP_001227023.1;Name=WP_001227023.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AB69_RS13950;product=glucuronide uptake porin UidC;protein_id=WP_001227023.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 116618 117991 . - . ID=gene-AB69_RS13945;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AB69_RS13945;old_locus_tag=AB69_1769 NZ_JHDO01000084.1 Protein Homology CDS 116618 117991 . - 0 ID=cds-WP_001075863.1;Parent=gene-AB69_RS13945;Dbxref=GenBank:WP_001075863.1;Name=WP_001075863.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AB69_RS13945;product=glucuronide transporter;protein_id=WP_001075863.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 117988 119798 . - . ID=gene-AB69_RS13940;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=pseudogene;locus_tag=AB69_RS13940;old_locus_tag=AB69_1771;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 117988 119798 . - 0 ID=cds-AB69_RS13940;Parent=gene-AB69_RS13940;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014850.6;locus_tag=AB69_RS13940;product=beta-glucuronidase;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 120189 120779 . - . ID=gene-AB69_RS13935;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AB69_RS13935;old_locus_tag=AB69_1772 NZ_JHDO01000084.1 Protein Homology CDS 120189 120779 . - 0 ID=cds-WP_000969092.1;Parent=gene-AB69_RS13935;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AB69_RS13935;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 121000 121767 . - . ID=gene-AB69_RS13930;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AB69_RS13930;old_locus_tag=AB69_1773 NZ_JHDO01000084.1 Protein Homology CDS 121000 121767 . - 0 ID=cds-WP_000483353.1;Parent=gene-AB69_RS13930;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AB69_RS13930;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 121879 122907 . - . ID=gene-AB69_RS13925;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AB69_RS13925;old_locus_tag=AB69_1774 NZ_JHDO01000084.1 Protein Homology CDS 121879 122907 . - 0 ID=cds-WP_000179510.1;Parent=gene-AB69_RS13925;Dbxref=GenBank:WP_000179510.1;Name=WP_000179510.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AB69_RS13925;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179510.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 123082 124674 . + . ID=gene-AB69_RS13920;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AB69_RS13920;old_locus_tag=AB69_1775 NZ_JHDO01000084.1 Protein Homology CDS 123082 124674 . + 0 ID=cds-WP_000125583.1;Parent=gene-AB69_RS13920;Dbxref=GenBank:WP_000125583.1;Name=WP_000125583.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AB69_RS13920;product=PTS maltose transporter subunit IICB;protein_id=WP_000125583.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 124684 125856 . + . ID=gene-AB69_RS13915;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AB69_RS13915;old_locus_tag=AB69_1776 NZ_JHDO01000084.1 Protein Homology CDS 124684 125856 . + 0 ID=cds-WP_000459379.1;Parent=gene-AB69_RS13915;Dbxref=GenBank:WP_000459379.1;Name=WP_000459379.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AB69_RS13915;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459379.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 125960 126961 . + . ID=gene-AB69_RS13910;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AB69_RS13910;old_locus_tag=AB69_1777 NZ_JHDO01000084.1 Protein Homology CDS 125960 126961 . + 0 ID=cds-WP_032231204.1;Parent=gene-AB69_RS13910;Dbxref=GenBank:WP_032231204.1;Name=WP_032231204.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AB69_RS13910;product=adenosine deaminase;protein_id=WP_032231204.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 126995 128035 . - . ID=gene-AB69_RS13905;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AB69_RS13905;old_locus_tag=AB69_1778 NZ_JHDO01000084.1 Protein Homology CDS 126995 128035 . - 0 ID=cds-WP_001282516.1;Parent=gene-AB69_RS13905;Dbxref=GenBank:WP_001282516.1;Name=WP_001282516.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AB69_RS13905;product=oxidoreductase;protein_id=WP_001282516.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 128278 128403 . + . ID=gene-AB69_RS0124375;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AB69_RS0124375 NZ_JHDO01000084.1 Protein Homology CDS 128278 128403 . + 0 ID=cds-WP_001300888.1;Parent=gene-AB69_RS0124375;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AB69_RS0124375;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 128676 128891 . + . ID=gene-AB69_RS13900;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AB69_RS13900;old_locus_tag=AB69_1779 NZ_JHDO01000084.1 Protein Homology CDS 128676 128891 . + 0 ID=cds-WP_000217950.1;Parent=gene-AB69_RS13900;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AB69_RS13900;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 128977 129417 . + . ID=gene-AB69_RS13895;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AB69_RS13895;old_locus_tag=AB69_1780 NZ_JHDO01000084.1 Protein Homology CDS 128977 129417 . + 0 ID=cds-WP_001310854.1;Parent=gene-AB69_RS13895;Dbxref=GenBank:WP_001310854.1;Name=WP_001310854.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416143.2;locus_tag=AB69_RS13895;product=DUF2569 domain-containing protein;protein_id=WP_001310854.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 129494 130075 . + . ID=gene-AB69_RS13890;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AB69_RS13890;old_locus_tag=AB69_1781 NZ_JHDO01000084.1 Protein Homology CDS 129494 130075 . + 0 ID=cds-WP_000133193.1;Parent=gene-AB69_RS13890;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AB69_RS13890;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 130075 130653 . + . ID=gene-AB69_RS13885;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AB69_RS13885;old_locus_tag=AB69_1782 NZ_JHDO01000084.1 Protein Homology CDS 130075 130653 . + 0 ID=cds-WP_000991805.1;Parent=gene-AB69_RS13885;Dbxref=GenBank:WP_000991805.1;Name=WP_000991805.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AB69_RS13885;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 130646 132868 . + . ID=gene-AB69_RS13880;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AB69_RS13880;old_locus_tag=AB69_1783 NZ_JHDO01000084.1 Protein Homology CDS 130646 132868 . + 0 ID=cds-WP_000915778.1;Parent=gene-AB69_RS13880;Dbxref=GenBank:WP_000915778.1;Name=WP_000915778.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AB69_RS13880;product=electron transport complex subunit RsxC;protein_id=WP_000915778.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 132869 133927 . + . ID=gene-AB69_RS13875;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AB69_RS13875;old_locus_tag=AB69_1784 NZ_JHDO01000084.1 Protein Homology CDS 132869 133927 . + 0 ID=cds-WP_000231927.1;Parent=gene-AB69_RS13875;Dbxref=GenBank:WP_000231927.1;Name=WP_000231927.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AB69_RS13875;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 133931 134551 . + . ID=gene-AB69_RS13870;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AB69_RS13870;old_locus_tag=AB69_1785 NZ_JHDO01000084.1 Protein Homology CDS 133931 134551 . + 0 ID=cds-WP_000920784.1;Parent=gene-AB69_RS13870;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AB69_RS13870;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 134555 135250 . + . ID=gene-AB69_RS13865;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AB69_RS13865;old_locus_tag=AB69_1786 NZ_JHDO01000084.1 Protein Homology CDS 134555 135250 . + 0 ID=cds-WP_001289652.1;Parent=gene-AB69_RS13865;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AB69_RS13865;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 135250 135885 . + . ID=gene-AB69_RS13860;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AB69_RS13860;old_locus_tag=AB69_1787 NZ_JHDO01000084.1 Protein Homology CDS 135250 135885 . + 0 ID=cds-WP_001030339.1;Parent=gene-AB69_RS13860;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AB69_RS13860;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 136496 137998 . + . ID=gene-AB69_RS13855;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AB69_RS13855;old_locus_tag=AB69_1788 NZ_JHDO01000084.1 Protein Homology CDS 136496 137998 . + 0 ID=cds-WP_000100932.1;Parent=gene-AB69_RS13855;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AB69_RS13855;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 138104 138709 . + . ID=gene-AB69_RS13850;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AB69_RS13850;old_locus_tag=AB69_1789 NZ_JHDO01000084.1 Protein Homology CDS 138104 138709 . + 0 ID=cds-WP_032231206.1;Parent=gene-AB69_RS13850;Dbxref=GenBank:WP_032231206.1;Name=WP_032231206.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AB69_RS13850;product=glutathione transferase GstA;protein_id=WP_032231206.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 138753 139616 . - . ID=gene-AB69_RS13845;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AB69_RS13845;old_locus_tag=AB69_1790 NZ_JHDO01000084.1 Protein Homology CDS 138753 139616 . - 0 ID=cds-WP_001307229.1;Parent=gene-AB69_RS13845;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AB69_RS13845;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 139675 140949 . - . ID=gene-AB69_RS13840;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AB69_RS13840;old_locus_tag=AB69_1791 NZ_JHDO01000084.1 Protein Homology CDS 139675 140949 . - 0 ID=cds-WP_032231207.1;Parent=gene-AB69_RS13840;Dbxref=GenBank:WP_032231207.1;Name=WP_032231207.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AB69_RS13840;product=tyrosine--tRNA ligase;protein_id=WP_032231207.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 141078 141734 . - . ID=gene-AB69_RS13835;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AB69_RS13835;old_locus_tag=AB69_1792 NZ_JHDO01000084.1 Protein Homology CDS 141078 141734 . - 0 ID=cds-WP_001282319.1;Parent=gene-AB69_RS13835;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AB69_RS13835;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 141793 142122 . - . ID=gene-AB69_RS13830;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AB69_RS13830;old_locus_tag=AB69_1793 NZ_JHDO01000084.1 Protein Homology CDS 141793 142122 . - 0 ID=cds-WP_000178044.1;Parent=gene-AB69_RS13830;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AB69_RS13830;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 142220 143329 . - . ID=gene-AB69_RS13825;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AB69_RS13825;old_locus_tag=AB69_1794 NZ_JHDO01000084.1 Protein Homology CDS 142220 143329 . - 0 ID=cds-WP_000835077.1;Parent=gene-AB69_RS13825;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AB69_RS13825;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 143603 144070 . + . ID=gene-AB69_RS13820;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AB69_RS13820;old_locus_tag=AB69_1795 NZ_JHDO01000084.1 Protein Homology CDS 143603 144070 . + 0 ID=cds-WP_000597196.1;Parent=gene-AB69_RS13820;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AB69_RS13820;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 144117 144551 . - . ID=gene-AB69_RS13815;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AB69_RS13815;old_locus_tag=AB69_1796 NZ_JHDO01000084.1 Protein Homology CDS 144117 144551 . - 0 ID=cds-WP_001296943.1;Parent=gene-AB69_RS13815;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AB69_RS13815;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 144752 144988 . + . ID=gene-AB69_RS13810;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AB69_RS13810;old_locus_tag=AB69_1798 NZ_JHDO01000084.1 Protein Homology CDS 144752 144988 . + 0 ID=cds-WP_000670998.1;Parent=gene-AB69_RS13810;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AB69_RS13810;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 144991 145848 . + . ID=gene-AB69_RS13805;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AB69_RS13805;old_locus_tag=AB69_1799 NZ_JHDO01000084.1 Protein Homology CDS 144991 145848 . + 0 ID=cds-WP_001300356.1;Parent=gene-AB69_RS13805;Dbxref=GenBank:WP_001300356.1;Name=WP_001300356.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AB69_RS13805;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001300356.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 145848 147857 . + . ID=gene-AB69_RS13800;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AB69_RS13800;old_locus_tag=AB69_1800 NZ_JHDO01000084.1 Protein Homology CDS 145848 147857 . + 0 ID=cds-WP_021526348.1;Parent=gene-AB69_RS13800;Dbxref=GenBank:WP_021526348.1;Name=WP_021526348.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AB69_RS13800;product=FUSC family protein;protein_id=WP_021526348.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 147858 148379 . - . ID=gene-AB69_RS13795;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AB69_RS13795;old_locus_tag=AB69_1801 NZ_JHDO01000084.1 Protein Homology CDS 147858 148379 . - 0 ID=cds-WP_001296937.1;Parent=gene-AB69_RS13795;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AB69_RS13795;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 148460 149356 . - . ID=gene-AB69_RS13790;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AB69_RS13790;old_locus_tag=AB69_1802 NZ_JHDO01000084.1 Protein Homology CDS 148460 149356 . - 0 ID=cds-WP_000250656.1;Parent=gene-AB69_RS13790;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AB69_RS13790;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 149405 149644 . - . ID=gene-AB69_RS0124385;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AB69_RS0124385 NZ_JHDO01000084.1 Protein Homology CDS 149405 149644 . - 0 ID=cds-WP_000840481.1;Parent=gene-AB69_RS0124385;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AB69_RS0124385;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 149747 150346 . + . ID=gene-AB69_RS13785;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AB69_RS13785;old_locus_tag=AB69_1804 NZ_JHDO01000084.1 Protein Homology CDS 149747 150346 . + 0 ID=cds-WP_001032936.1;Parent=gene-AB69_RS13785;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AB69_RS13785;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 150383 151480 . + . ID=gene-AB69_RS13780;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AB69_RS13780;old_locus_tag=AB69_1805 NZ_JHDO01000084.1 Protein Homology CDS 150383 151480 . + 0 ID=cds-WP_000093589.1;Parent=gene-AB69_RS13780;Dbxref=GenBank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AB69_RS13780;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 151561 151968 . + . ID=gene-AB69_RS13775;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AB69_RS13775;old_locus_tag=AB69_1806 NZ_JHDO01000084.1 Protein Homology CDS 151561 151968 . + 0 ID=cds-WP_001237796.1;Parent=gene-AB69_RS13775;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AB69_RS13775;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 152071 152718 . + . ID=gene-AB69_RS13770;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AB69_RS13770;old_locus_tag=AB69_1807 NZ_JHDO01000084.1 Protein Homology CDS 152071 152718 . + 0 ID=cds-WP_032231209.1;Parent=gene-AB69_RS13770;Dbxref=GenBank:WP_032231209.1;Name=WP_032231209.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416169.1;locus_tag=AB69_RS13770;product=ribonuclease T;protein_id=WP_032231209.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 152811 157427 . + . ID=gene-AB69_RS0124390;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=pseudogene;locus_tag=AB69_RS0124390;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 152811 157427 . + 0 ID=cds-AB69_RS0124390;Parent=gene-AB69_RS0124390;Note=internal stop;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AB69_RS0124390;product=ATP-dependent helicase;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 157478 157825 . - . ID=gene-AB69_RS13765;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AB69_RS13765;old_locus_tag=AB69_1810 NZ_JHDO01000084.1 Protein Homology CDS 157478 157825 . - 0 ID=cds-WP_000108172.1;Parent=gene-AB69_RS13765;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AB69_RS13765;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 157907 158059 . - . ID=gene-AB69_RS29985;Name=AB69_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29985;old_locus_tag=AB69_1811 NZ_JHDO01000084.1 Protein Homology CDS 157907 158059 . - 0 ID=cds-WP_001299740.1;Parent=gene-AB69_RS29985;Dbxref=GenBank:WP_001299740.1;Name=WP_001299740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001299740.1;locus_tag=AB69_RS29985;product=hypothetical protein;protein_id=WP_001299740.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 158159 158974 . + . ID=gene-AB69_RS13760;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AB69_RS13760;old_locus_tag=AB69_1812 NZ_JHDO01000084.1 Protein Homology CDS 158159 158974 . + 0 ID=cds-WP_000101193.1;Parent=gene-AB69_RS13760;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AB69_RS13760;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 159102 159683 . + . ID=gene-AB69_RS13755;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AB69_RS13755;old_locus_tag=AB69_1813 NZ_JHDO01000084.1 Protein Homology CDS 159102 159683 . + 0 ID=cds-WP_000007283.1;Parent=gene-AB69_RS13755;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AB69_RS13755;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 159918 161087 . - . ID=gene-AB69_RS13750;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AB69_RS13750;old_locus_tag=AB69_1814 NZ_JHDO01000084.1 Protein Homology CDS 159918 161087 . - 0 ID=cds-WP_000701040.1;Parent=gene-AB69_RS13750;Dbxref=GenBank:WP_000701040.1;Name=WP_000701040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AB69_RS13750;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 161253 161342 . - . ID=gene-AB69_RS0124395;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AB69_RS0124395;old_locus_tag=AB69_1815 NZ_JHDO01000084.1 Protein Homology CDS 161253 161342 . - 0 ID=cds-WP_000102278.1;Parent=gene-AB69_RS0124395;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AB69_RS0124395;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 161641 162666 . + . ID=gene-AB69_RS13745;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AB69_RS13745;old_locus_tag=AB69_1816 NZ_JHDO01000084.1 Protein Homology CDS 161641 162666 . + 0 ID=cds-WP_000190982.1;Parent=gene-AB69_RS13745;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AB69_RS13745;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 162663 163595 . - . ID=gene-AB69_RS13740;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AB69_RS13740;old_locus_tag=AB69_1817 NZ_JHDO01000084.1 Protein Homology CDS 162663 163595 . - 0 ID=cds-WP_000269501.1;Parent=gene-AB69_RS13740;Dbxref=GenBank:WP_000269501.1;Name=WP_000269501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AB69_RS13740;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269501.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 163708 164919 . + . ID=gene-AB69_RS13735;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AB69_RS13735;old_locus_tag=AB69_1818 NZ_JHDO01000084.1 Protein Homology CDS 163708 164919 . + 0 ID=cds-WP_001182363.1;Parent=gene-AB69_RS13735;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AB69_RS13735;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 165210 166358 . + . ID=gene-AB69_RS13730;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AB69_RS13730;old_locus_tag=AB69_1819 NZ_JHDO01000084.1 Protein Homology CDS 165210 166358 . + 0 ID=cds-WP_000098896.1;Parent=gene-AB69_RS13730;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AB69_RS13730;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 166398 167039 . - . ID=gene-AB69_RS13725;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AB69_RS13725;old_locus_tag=AB69_1820 NZ_JHDO01000084.1 Protein Homology CDS 166398 167039 . - 0 ID=cds-WP_000493947.1;Parent=gene-AB69_RS13725;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AB69_RS13725;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 167254 168627 . + . ID=gene-AB69_RS13720;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AB69_RS13720;old_locus_tag=AB69_1821 NZ_JHDO01000084.1 Protein Homology CDS 167254 168627 . + 0 ID=cds-WP_032231210.1;Parent=gene-AB69_RS13720;Dbxref=GenBank:WP_032231210.1;Name=WP_032231210.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AB69_RS13720;product=multidrug efflux MATE transporter MdtK;protein_id=WP_032231210.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 168668 169924 . - . ID=gene-AB69_RS13715;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AB69_RS13715;old_locus_tag=AB69_1822 NZ_JHDO01000084.1 Protein Homology CDS 168668 169924 . - 0 ID=cds-WP_000534271.1;Parent=gene-AB69_RS13715;Dbxref=GenBank:WP_000534271.1;Name=WP_000534271.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AB69_RS13715;product=AIDA repeat-containing protein;protein_id=WP_000534271.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 170232 170308 . + . ID=gene-AB69_RS13710;Name=AB69_RS13710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS13710;old_locus_tag=AB69_1823 NZ_JHDO01000084.1 tRNAscan-SE tRNA 170232 170308 . + . ID=rna-AB69_RS13710;Parent=gene-AB69_RS13710;anticodon=(pos:170266..170268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS13710;product=tRNA-Val NZ_JHDO01000084.1 tRNAscan-SE exon 170232 170308 . + . ID=exon-AB69_RS13710-1;Parent=rna-AB69_RS13710;anticodon=(pos:170266..170268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS13710;product=tRNA-Val NZ_JHDO01000084.1 RefSeq gene 170313 170389 . + . ID=gene-AB69_RS13705;Name=AB69_RS13705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS13705;old_locus_tag=AB69_1824 NZ_JHDO01000084.1 tRNAscan-SE tRNA 170313 170389 . + . ID=rna-AB69_RS13705;Parent=gene-AB69_RS13705;anticodon=(pos:170347..170349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS13705;product=tRNA-Val NZ_JHDO01000084.1 tRNAscan-SE exon 170313 170389 . + . ID=exon-AB69_RS13705-1;Parent=rna-AB69_RS13705;anticodon=(pos:170347..170349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS13705;product=tRNA-Val NZ_JHDO01000084.1 RefSeq gene 170497 170802 . + . ID=gene-AB69_RS13700;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AB69_RS13700;old_locus_tag=AB69_1825 NZ_JHDO01000084.1 Protein Homology CDS 170497 170802 . + 0 ID=cds-WP_000212657.1;Parent=gene-AB69_RS13700;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AB69_RS13700;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 170928 172532 . + . ID=gene-AB69_RS13695;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AB69_RS13695;old_locus_tag=AB69_1826 NZ_JHDO01000084.1 Protein Homology CDS 170928 172532 . + 0 ID=cds-WP_000716950.1;Parent=gene-AB69_RS13695;Dbxref=GenBank:WP_000716950.1;Name=WP_000716950.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AB69_RS13695;product=FAD-NAD(P)-binding protein;protein_id=WP_000716950.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 172544 173356 . - . ID=gene-AB69_RS13690;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AB69_RS13690;old_locus_tag=AB69_1827 NZ_JHDO01000084.1 Protein Homology CDS 172544 173356 . - 0 ID=cds-WP_000587525.1;Parent=gene-AB69_RS13690;Dbxref=GenBank:WP_000587525.1;Name=WP_000587525.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AB69_RS13690;product=protein YdhT;protein_id=WP_000587525.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 173360 174145 . - . ID=gene-AB69_RS13685;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AB69_RS13685;old_locus_tag=AB69_1828 NZ_JHDO01000084.1 Protein Homology CDS 173360 174145 . - 0 ID=cds-WP_001069979.1;Parent=gene-AB69_RS13685;Dbxref=GenBank:WP_001069979.1;Name=WP_001069979.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AB69_RS13685;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069979.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 174142 174810 . - . ID=gene-AB69_RS13680;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AB69_RS13680;old_locus_tag=AB69_1829 NZ_JHDO01000084.1 Protein Homology CDS 174142 174810 . - 0 ID=cds-WP_001310861.1;Parent=gene-AB69_RS13680;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AB69_RS13680;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 174874 175512 . - . ID=gene-AB69_RS13675;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AB69_RS13675;old_locus_tag=AB69_1830 NZ_JHDO01000084.1 Protein Homology CDS 174874 175512 . - 0 ID=cds-WP_001301419.1;Parent=gene-AB69_RS13675;Dbxref=GenBank:WP_001301419.1;Name=WP_001301419.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AB69_RS13675;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001301419.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 175525 177627 . - . ID=gene-AB69_RS13670;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AB69_RS13670;old_locus_tag=AB69_1831 NZ_JHDO01000084.1 Protein Homology CDS 175525 177627 . - 0 ID=cds-WP_001273527.1;Parent=gene-AB69_RS13670;Dbxref=GenBank:WP_001273527.1;Name=WP_001273527.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AB69_RS13670;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 177648 178274 . - . ID=gene-AB69_RS13665;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AB69_RS13665;old_locus_tag=AB69_1832 NZ_JHDO01000084.1 Protein Homology CDS 177648 178274 . - 0 ID=cds-WP_001070230.1;Parent=gene-AB69_RS13665;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AB69_RS13665;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 178729 178938 . - . ID=gene-AB69_RS13660;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AB69_RS13660;old_locus_tag=AB69_1834 NZ_JHDO01000084.1 Protein Homology CDS 178729 178938 . - 0 ID=cds-WP_000528342.1;Parent=gene-AB69_RS13660;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AB69_RS13660;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 179293 179487 . + . ID=gene-AB69_RS30295;Name=AB69_RS30295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30295 NZ_JHDO01000084.1 Protein Homology CDS 179293 179487 . + 0 ID=cds-WP_240806354.1;Parent=gene-AB69_RS30295;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AB69_RS30295;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 179495 180907 . + . ID=gene-AB69_RS13655;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AB69_RS13655;old_locus_tag=AB69_1835 NZ_JHDO01000084.1 Protein Homology CDS 179495 180907 . + 0 ID=cds-WP_001295403.1;Parent=gene-AB69_RS13655;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AB69_RS13655;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 181218 181454 . + . ID=gene-AB69_RS13650;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AB69_RS13650;old_locus_tag=AB69_1836 NZ_JHDO01000084.1 Protein Homology CDS 181218 181454 . + 0 ID=cds-WP_000648420.1;Parent=gene-AB69_RS13650;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AB69_RS13650;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 181518 182522 . - . ID=gene-AB69_RS13645;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AB69_RS13645;old_locus_tag=AB69_1837 NZ_JHDO01000084.1 Protein Homology CDS 181518 182522 . - 0 ID=cds-WP_000817105.1;Parent=gene-AB69_RS13645;Dbxref=GenBank:WP_000817105.1;Name=WP_000817105.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AB69_RS13645;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817105.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 182671 183087 . - . ID=gene-AB69_RS13640;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AB69_RS13640;old_locus_tag=AB69_1838 NZ_JHDO01000084.1 Protein Homology CDS 182671 183087 . - 0 ID=cds-WP_001196530.1;Parent=gene-AB69_RS13640;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AB69_RS13640;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 183100 184320 . - . ID=gene-AB69_RS13635;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AB69_RS13635;old_locus_tag=AB69_1839 NZ_JHDO01000084.1 Protein Homology CDS 183100 184320 . - 0 ID=cds-WP_000577988.1;Parent=gene-AB69_RS13635;Dbxref=GenBank:WP_000577988.1;Name=WP_000577988.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416195.1;locus_tag=AB69_RS13635;product=cysteine desulfurase SufS;protein_id=WP_000577988.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 184317 185588 . - . ID=gene-AB69_RS13630;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AB69_RS13630;old_locus_tag=AB69_1840 NZ_JHDO01000084.1 Protein Homology CDS 184317 185588 . - 0 ID=cds-WP_032231212.1;Parent=gene-AB69_RS13630;Dbxref=GenBank:WP_032231212.1;Name=WP_032231212.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416196.1;locus_tag=AB69_RS13630;product=Fe-S cluster assembly protein SufD;protein_id=WP_032231212.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 185563 186309 . - . ID=gene-AB69_RS13625;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AB69_RS13625;old_locus_tag=AB69_1841 NZ_JHDO01000084.1 Protein Homology CDS 185563 186309 . - 0 ID=cds-WP_000948863.1;Parent=gene-AB69_RS13625;Dbxref=GenBank:WP_000948863.1;Name=WP_000948863.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AB69_RS13625;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 186319 187806 . - . ID=gene-AB69_RS13620;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AB69_RS13620;old_locus_tag=AB69_1842 NZ_JHDO01000084.1 Protein Homology CDS 186319 187806 . - 0 ID=cds-WP_000089364.1;Parent=gene-AB69_RS13620;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AB69_RS13620;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 187815 188183 . - . ID=gene-AB69_RS13615;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AB69_RS13615;old_locus_tag=AB69_1843 NZ_JHDO01000084.1 Protein Homology CDS 187815 188183 . - 0 ID=cds-WP_000367160.1;Parent=gene-AB69_RS13615;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AB69_RS13615;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 188731 188919 . - . ID=gene-AB69_RS13610;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AB69_RS13610;old_locus_tag=AB69_1844 NZ_JHDO01000084.1 Protein Homology CDS 188731 188919 . - 0 ID=cds-WP_001296104.1;Parent=gene-AB69_RS13610;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AB69_RS13610;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 189019 189429 . - . ID=gene-AB69_RS13605;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AB69_RS13605;old_locus_tag=AB69_1845 NZ_JHDO01000084.1 Protein Homology CDS 189019 189429 . - 0 ID=cds-WP_000637982.1;Parent=gene-AB69_RS13605;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AB69_RS13605;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 189426 192482 . - . ID=gene-AB69_RS13600;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AB69_RS13600;old_locus_tag=AB69_1846 NZ_JHDO01000084.1 Protein Homology CDS 189426 192482 . - 0 ID=cds-WP_000613008.1;Parent=gene-AB69_RS13600;Dbxref=GenBank:WP_000613008.1;Name=WP_000613008.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AB69_RS13600;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000613008.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 192871 193983 . + . ID=gene-AB69_RS13595;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AB69_RS13595;old_locus_tag=AB69_1847 NZ_JHDO01000084.1 Protein Homology CDS 192871 193983 . + 0 ID=cds-WP_000248636.1;Parent=gene-AB69_RS13595;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AB69_RS13595;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 194169 194276 . + . ID=gene-AB69_RS25760;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AB69_RS25760 NZ_JHDO01000084.1 cmsearch antisense_RNA 194169 194276 . + . ID=rna-AB69_RS25760;Parent=gene-AB69_RS25760;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25760;product=antisense sRNA RprA NZ_JHDO01000084.1 cmsearch exon 194169 194276 . + . ID=exon-AB69_RS25760-1;Parent=rna-AB69_RS25760;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25760;product=antisense sRNA RprA NZ_JHDO01000084.1 RefSeq gene 194412 194768 . + . ID=gene-AB69_RS13590;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AB69_RS13590;old_locus_tag=AB69_1848 NZ_JHDO01000084.1 Protein Homology CDS 194412 194768 . + 0 ID=cds-WP_001310864.1;Parent=gene-AB69_RS13590;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AB69_RS13590;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 194868 196082 . + . ID=gene-AB69_RS13585;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AB69_RS13585;old_locus_tag=AB69_1849 NZ_JHDO01000084.1 Protein Homology CDS 194868 196082 . + 0 ID=cds-WP_032231214.1;Parent=gene-AB69_RS13585;Dbxref=GenBank:WP_032231214.1;Name=WP_032231214.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AB69_RS13585;product=MFS transporter;protein_id=WP_032231214.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 196309 197574 . + . ID=gene-AB69_RS13580;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AB69_RS13580;old_locus_tag=AB69_1850 NZ_JHDO01000084.1 Protein Homology CDS 196309 197574 . + 0 ID=cds-WP_032231215.1;Parent=gene-AB69_RS13580;Dbxref=GenBank:WP_032231215.1;Name=WP_032231215.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416206.6;locus_tag=AB69_RS13580;product=MFS transporter;protein_id=WP_032231215.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 197586 198452 . + . ID=gene-AB69_RS13575;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AB69_RS13575;old_locus_tag=AB69_1851 NZ_JHDO01000084.1 Protein Homology CDS 197586 198452 . + 0 ID=cds-WP_032231216.1;Parent=gene-AB69_RS13575;Dbxref=GenBank:WP_032231216.1;Name=WP_032231216.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AB69_RS13575;product=quinate/shikimate dehydrogenase;protein_id=WP_032231216.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 198483 199241 . + . ID=gene-AB69_RS13570;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AB69_RS13570;old_locus_tag=AB69_1852 NZ_JHDO01000084.1 Protein Homology CDS 198483 199241 . + 0 ID=cds-WP_000860201.1;Parent=gene-AB69_RS13570;Dbxref=GenBank:WP_000860201.1;Name=WP_000860201.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AB69_RS13570;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860201.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 199384 200979 . + . ID=gene-AB69_RS13565;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AB69_RS13565;old_locus_tag=AB69_1853 NZ_JHDO01000084.1 Protein Homology CDS 199384 200979 . + 0 ID=cds-WP_000805700.1;Parent=gene-AB69_RS13565;Dbxref=GenBank:WP_000805700.1;Name=WP_000805700.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AB69_RS13565;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805700.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 200993 202144 . + . ID=gene-AB69_RS13560;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AB69_RS13560;old_locus_tag=AB69_1854 NZ_JHDO01000084.1 Protein Homology CDS 200993 202144 . + 0 ID=cds-WP_000347850.1;Parent=gene-AB69_RS13560;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AB69_RS13560;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 202187 203098 . - . ID=gene-AB69_RS13555;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=AB69_RS13555;old_locus_tag=AB69_1855 NZ_JHDO01000084.1 Protein Homology CDS 202187 203098 . - 0 ID=cds-WP_000284799.1;Parent=gene-AB69_RS13555;Dbxref=GenBank:WP_000284799.1;Name=WP_000284799.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416211.1;locus_tag=AB69_RS13555;product=AraC family transcriptional regulator;protein_id=WP_000284799.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 203414 204178 . + . ID=gene-AB69_RS13545;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AB69_RS13545;old_locus_tag=AB69_1857 NZ_JHDO01000084.1 Protein Homology CDS 203414 204178 . + 0 ID=cds-WP_000692135.1;Parent=gene-AB69_RS13545;Dbxref=GenBank:WP_000692135.1;Name=WP_000692135.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=AB69_RS13545;product=electron transfer flavoprotein;protein_id=WP_000692135.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 204198 205136 . + . ID=gene-AB69_RS13540;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AB69_RS13540;old_locus_tag=AB69_1858 NZ_JHDO01000084.1 Protein Homology CDS 204198 205136 . + 0 ID=cds-WP_000080722.1;Parent=gene-AB69_RS13540;Dbxref=GenBank:WP_000080722.1;Name=WP_000080722.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416213.1;locus_tag=AB69_RS13540;product=electron transfer flavoprotein subunit alpha;protein_id=WP_000080722.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 205192 206481 . + . ID=gene-AB69_RS13535;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AB69_RS13535;old_locus_tag=AB69_1859 NZ_JHDO01000084.1 Protein Homology CDS 205192 206481 . + 0 ID=cds-WP_001278525.1;Parent=gene-AB69_RS13535;Dbxref=GenBank:WP_001278525.1;Name=WP_001278525.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=AB69_RS13535;product=FAD-dependent oxidoreductase;protein_id=WP_001278525.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 206478 206771 . + . ID=gene-AB69_RS13530;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AB69_RS13530;old_locus_tag=AB69_1860 NZ_JHDO01000084.1 Protein Homology CDS 206478 206771 . + 0 ID=cds-WP_000081081.1;Parent=gene-AB69_RS13530;Dbxref=GenBank:WP_000081081.1;Name=WP_000081081.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416215.1;locus_tag=AB69_RS13530;product=ferredoxin family protein;protein_id=WP_000081081.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 206828 208474 . + . ID=gene-AB69_RS13525;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AB69_RS13525;old_locus_tag=AB69_1861 NZ_JHDO01000084.1 Protein Homology CDS 206828 208474 . + 0 ID=cds-WP_032231251.1;Parent=gene-AB69_RS13525;Dbxref=GenBank:WP_032231251.1;Name=WP_032231251.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AB69_RS13525;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_032231251.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 208531 210909 . - . ID=gene-AB69_RS13520;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AB69_RS13520;old_locus_tag=AB69_1862 NZ_JHDO01000084.1 Protein Homology CDS 208531 210909 . - 0 ID=cds-WP_000069375.1;Parent=gene-AB69_RS13520;Dbxref=GenBank:WP_000069375.1;Name=WP_000069375.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AB69_RS13520;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 211242 212075 . + . ID=gene-AB69_RS13515;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AB69_RS13515;old_locus_tag=AB69_1863 NZ_JHDO01000084.1 Protein Homology CDS 211242 212075 . + 0 ID=cds-WP_000368046.1;Parent=gene-AB69_RS13515;Dbxref=GenBank:WP_000368046.1;Name=WP_000368046.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AB69_RS13515;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 212232 213278 . + . ID=gene-AB69_RS13510;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AB69_RS13510;old_locus_tag=AB69_1864 NZ_JHDO01000084.1 Protein Homology CDS 212232 213278 . + 0 ID=cds-WP_001082229.1;Parent=gene-AB69_RS13510;Dbxref=GenBank:WP_001082229.1;Name=WP_001082229.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416219.1;locus_tag=AB69_RS13510;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082229.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 213410 213601 . + . ID=gene-AB69_RS13505;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AB69_RS13505;old_locus_tag=AB69_1865 NZ_JHDO01000084.1 Protein Homology CDS 213410 213601 . + 0 ID=cds-WP_001270809.1;Parent=gene-AB69_RS13505;Dbxref=GenBank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AB69_RS13505;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 213605 215041 . - . ID=gene-AB69_RS13500;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AB69_RS13500;old_locus_tag=AB69_1866 NZ_JHDO01000084.1 Protein Homology CDS 213605 215041 . - 0 ID=cds-WP_000175703.1;Parent=gene-AB69_RS13500;Dbxref=GenBank:WP_000175703.1;Name=WP_000175703.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416221.1;locus_tag=AB69_RS13500;product=protein adenylyltransferase SelO;protein_id=WP_000175703.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 215104 215817 . - . ID=gene-AB69_RS13495;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AB69_RS13495;old_locus_tag=AB69_1867 NZ_JHDO01000084.1 Protein Homology CDS 215104 215817 . - 0 ID=cds-WP_001300634.1;Parent=gene-AB69_RS13495;Dbxref=GenBank:WP_001300634.1;Name=WP_001300634.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AB69_RS13495;product=anti-FlhDC factor;protein_id=WP_001300634.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 216064 216528 . - . ID=gene-AB69_RS13490;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AB69_RS13490;old_locus_tag=AB69_1868 NZ_JHDO01000084.1 Protein Homology CDS 216064 216528 . - 0 ID=cds-WP_001209795.1;Parent=gene-AB69_RS13490;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AB69_RS13490;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 216606 217355 . - . ID=gene-AB69_RS13485;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AB69_RS13485;old_locus_tag=AB69_1869 NZ_JHDO01000084.1 Protein Homology CDS 216606 217355 . - 0 ID=cds-WP_000029466.1;Parent=gene-AB69_RS13485;Dbxref=GenBank:WP_000029466.1;Name=WP_000029466.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AB69_RS13485;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 217355 217906 . - . ID=gene-AB69_RS13480;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AB69_RS13480;old_locus_tag=AB69_1870 NZ_JHDO01000084.1 Protein Homology CDS 217355 217906 . - 0 ID=cds-WP_001154168.1;Parent=gene-AB69_RS13480;Dbxref=GenBank:WP_001154168.1;Name=WP_001154168.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416225.1;locus_tag=AB69_RS13480;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154168.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 217969 218949 . - . ID=gene-AB69_RS13475;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AB69_RS13475;old_locus_tag=AB69_1871 NZ_JHDO01000084.1 Protein Homology CDS 217969 218949 . - 0 ID=cds-WP_000956528.1;Parent=gene-AB69_RS13475;Dbxref=GenBank:WP_000956528.1;Name=WP_000956528.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AB69_RS13475;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956528.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 219050 219349 . - . ID=gene-AB69_RS13470;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AB69_RS13470;old_locus_tag=AB69_1872 NZ_JHDO01000084.1 Protein Homology CDS 219050 219349 . - 0 ID=cds-WP_001229265.1;Parent=gene-AB69_RS13470;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AB69_RS13470;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 219354 221741 . - . ID=gene-AB69_RS13465;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AB69_RS13465;old_locus_tag=AB69_1873 NZ_JHDO01000084.1 Protein Homology CDS 219354 221741 . - 0 ID=cds-WP_000672380.1;Parent=gene-AB69_RS13465;Dbxref=GenBank:WP_000672380.1;Name=WP_000672380.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AB69_RS13465;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672380.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 221756 222739 . - . ID=gene-AB69_RS13460;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AB69_RS13460;old_locus_tag=AB69_1874 NZ_JHDO01000084.1 Protein Homology CDS 221756 222739 . - 0 ID=cds-WP_000018596.1;Parent=gene-AB69_RS13460;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AB69_RS13460;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JHDO01000084.1 cmsearch sequence_feature 222949 223073 . - . ID=id-NZ_JHDO01000084.1:222949..223073;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000084.1 RefSeq gene 223023 223067 . - . ID=gene-AB69_RS29340;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AB69_RS29340 NZ_JHDO01000084.1 Protein Homology CDS 223023 223067 . - 0 ID=cds-WP_001386830.1;Parent=gene-AB69_RS29340;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AB69_RS29340;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 223190 223546 . - . ID=gene-AB69_RS13455;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AB69_RS13455;old_locus_tag=AB69_1876 NZ_JHDO01000084.1 Protein Homology CDS 223190 223546 . - 0 ID=cds-WP_000124850.1;Parent=gene-AB69_RS13455;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AB69_RS13455;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 223599 223796 . - . ID=gene-AB69_RS13450;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AB69_RS13450;old_locus_tag=AB69_1877 NZ_JHDO01000084.1 Protein Homology CDS 223599 223796 . - 0 ID=cds-WP_001124225.1;Parent=gene-AB69_RS13450;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AB69_RS13450;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 223893 224435 . - . ID=gene-AB69_RS0124410;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AB69_RS0124410 NZ_JHDO01000084.1 Protein Homology CDS 223893 224435 . - 0 ID=cds-WP_001700733.1;Parent=gene-AB69_RS0124410;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AB69_RS0124410;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 224439 226367 . - . ID=gene-AB69_RS13445;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AB69_RS13445;old_locus_tag=AB69_1879 NZ_JHDO01000084.1 Protein Homology CDS 224439 226367 . - 0 ID=cds-WP_001144202.1;Parent=gene-AB69_RS13445;Dbxref=GenBank:WP_001144202.1;Name=WP_001144202.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AB69_RS13445;product=threonine--tRNA ligase;protein_id=WP_001144202.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 226891 228790 . + . ID=gene-AB69_RS0124415;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AB69_RS0124415;old_locus_tag=AB69_1881;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 226891 228790 . + 0 ID=cds-AB69_RS0124415;Parent=gene-AB69_RS0124415;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AB69_RS0124415;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 228962 229069 . + . ID=gene-AB69_RS13440;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AB69_RS13440;old_locus_tag=AB69_1882 NZ_JHDO01000084.1 Protein Homology CDS 228962 229069 . + 0 ID=cds-WP_001142445.1;Parent=gene-AB69_RS13440;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AB69_RS13440;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 229122 229880 . - . ID=gene-AB69_RS13435;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AB69_RS13435;old_locus_tag=AB69_1883 NZ_JHDO01000084.1 Protein Homology CDS 229122 229880 . - 0 ID=cds-WP_000771391.1;Parent=gene-AB69_RS13435;Dbxref=GenBank:WP_000771391.1;Name=WP_000771391.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416236.1;locus_tag=AB69_RS13435;product=DUF481 domain-containing protein;protein_id=WP_000771391.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 230167 231096 . + . ID=gene-AB69_RS13430;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AB69_RS13430;old_locus_tag=AB69_1884 NZ_JHDO01000084.1 Protein Homology CDS 230167 231096 . + 0 ID=cds-WP_000251727.1;Parent=gene-AB69_RS13430;Dbxref=GenBank:WP_000251727.1;Name=WP_000251727.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AB69_RS13430;product=6-phosphofructokinase II;protein_id=WP_000251727.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 231197 231487 . + . ID=gene-AB69_RS13425;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB69_RS13425;old_locus_tag=AB69_1885 NZ_JHDO01000084.1 Protein Homology CDS 231197 231487 . + 0 ID=cds-WP_000146159.1;Parent=gene-AB69_RS13425;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AB69_RS13425;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 231593 232453 . + . ID=gene-AB69_RS13420;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AB69_RS13420;old_locus_tag=AB69_1886 NZ_JHDO01000084.1 Protein Homology CDS 231593 232453 . + 0 ID=cds-WP_000267650.1;Parent=gene-AB69_RS13420;Dbxref=GenBank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AB69_RS13420;product=fructosamine kinase family protein;protein_id=WP_000267650.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 232494 233030 . - . ID=gene-AB69_RS13415;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AB69_RS13415;old_locus_tag=AB69_1887 NZ_JHDO01000084.1 Protein Homology CDS 232494 233030 . - 0 ID=cds-WP_000222163.1;Parent=gene-AB69_RS13415;Dbxref=GenBank:WP_000222163.1;Name=WP_000222163.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AB69_RS13415;product=YniB family protein;protein_id=WP_000222163.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 233177 233845 . + . ID=gene-AB69_RS13410;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AB69_RS13410;old_locus_tag=AB69_1888 NZ_JHDO01000084.1 Protein Homology CDS 233177 233845 . + 0 ID=cds-WP_000106833.1;Parent=gene-AB69_RS13410;Dbxref=GenBank:WP_000106833.1;Name=WP_000106833.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AB69_RS13410;product=hexitol phosphatase HxpB;protein_id=WP_000106833.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 234008 234598 . + . ID=gene-AB69_RS13405;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AB69_RS13405;old_locus_tag=AB69_1889 NZ_JHDO01000084.1 Protein Homology CDS 234008 234598 . + 0 ID=cds-WP_032231218.1;Parent=gene-AB69_RS13405;Dbxref=GenBank:WP_032231218.1;Name=WP_032231218.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AB69_RS13405;product=metal-dependent hydrolase;protein_id=WP_032231218.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 234731 236122 . + . ID=gene-AB69_RS13400;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AB69_RS13400;old_locus_tag=AB69_1890 NZ_JHDO01000084.1 Protein Homology CDS 234731 236122 . + 0 ID=cds-WP_001010696.1;Parent=gene-AB69_RS13400;Dbxref=GenBank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AB69_RS13400;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 236126 236929 . - . ID=gene-AB69_RS13395;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AB69_RS13395;old_locus_tag=AB69_1891 NZ_JHDO01000084.1 Protein Homology CDS 236126 236929 . - 0 ID=cds-WP_001310874.1;Parent=gene-AB69_RS13395;Dbxref=GenBank:WP_001310874.1;Name=WP_001310874.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AB69_RS13395;product=protein YdjO;protein_id=WP_001310874.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 237218 237481 . - . ID=gene-AB69_RS13390;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AB69_RS13390;old_locus_tag=AB69_1892 NZ_JHDO01000084.1 Protein Homology CDS 237218 237481 . - 0 ID=cds-WP_001241561.1;Parent=gene-AB69_RS13390;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AB69_RS13390;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 237664 239925 . + . ID=gene-AB69_RS13385;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AB69_RS13385;old_locus_tag=AB69_1893 NZ_JHDO01000084.1 Protein Homology CDS 237664 239925 . + 0 ID=cds-WP_000077873.1;Parent=gene-AB69_RS13385;Dbxref=GenBank:WP_000077873.1;Name=WP_000077873.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AB69_RS13385;product=catalase HPII;protein_id=WP_000077873.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 240183 240932 . - . ID=gene-AB69_RS13380;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AB69_RS13380;old_locus_tag=AB69_1894 NZ_JHDO01000084.1 Protein Homology CDS 240183 240932 . - 0 ID=cds-WP_000440471.1;Parent=gene-AB69_RS13380;Dbxref=GenBank:WP_000440471.1;Name=WP_000440471.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AB69_RS13380;product=chitin disaccharide deacetylase;protein_id=WP_000440471.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 240945 242297 . - . ID=gene-AB69_RS13375;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AB69_RS13375;old_locus_tag=AB69_1895 NZ_JHDO01000084.1 Protein Homology CDS 240945 242297 . - 0 ID=cds-WP_032231220.1;Parent=gene-AB69_RS13375;Dbxref=GenBank:WP_032231220.1;Name=WP_032231220.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416248.1;locus_tag=AB69_RS13375;product=6-phospho-beta-glucosidase;protein_id=WP_032231220.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 242402 243244 . - . ID=gene-AB69_RS13370;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AB69_RS13370;old_locus_tag=AB69_1896 NZ_JHDO01000084.1 Protein Homology CDS 242402 243244 . - 0 ID=cds-WP_000983647.1;Parent=gene-AB69_RS13370;Dbxref=GenBank:WP_000983647.1;Name=WP_000983647.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AB69_RS13370;product=transcriptional regulator ChbR;protein_id=WP_000983647.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 243252 243602 . - . ID=gene-AB69_RS13365;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AB69_RS13365;old_locus_tag=AB69_1897 NZ_JHDO01000084.1 Protein Homology CDS 243252 243602 . - 0 ID=cds-WP_000968919.1;Parent=gene-AB69_RS13365;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AB69_RS13365;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 243653 245011 . - . ID=gene-AB69_RS13360;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AB69_RS13360;old_locus_tag=AB69_1898 NZ_JHDO01000084.1 Protein Homology CDS 243653 245011 . - 0 ID=cds-WP_000073041.1;Parent=gene-AB69_RS13360;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AB69_RS13360;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 245096 245416 . - . ID=gene-AB69_RS13355;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AB69_RS13355;old_locus_tag=AB69_1899 NZ_JHDO01000084.1 Protein Homology CDS 245096 245416 . - 0 ID=cds-WP_000412169.1;Parent=gene-AB69_RS13355;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AB69_RS13355;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 245715 246053 . - . ID=gene-AB69_RS13350;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AB69_RS13350;old_locus_tag=AB69_1900 NZ_JHDO01000084.1 Protein Homology CDS 245715 246053 . - 0 ID=cds-WP_001039044.1;Parent=gene-AB69_RS13350;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AB69_RS13350;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 246255 247082 . + . ID=gene-AB69_RS13345;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AB69_RS13345;old_locus_tag=AB69_1901 NZ_JHDO01000084.1 Protein Homology CDS 246255 247082 . + 0 ID=cds-WP_000175026.1;Parent=gene-AB69_RS13345;Dbxref=GenBank:WP_000175026.1;Name=WP_000175026.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AB69_RS13345;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 247312 248199 . + . ID=gene-AB69_RS13340;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AB69_RS13340;old_locus_tag=AB69_1902 NZ_JHDO01000084.1 Protein Homology CDS 247312 248199 . + 0 ID=cds-WP_000252397.1;Parent=gene-AB69_RS13340;Dbxref=GenBank:WP_000252397.1;Name=WP_000252397.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AB69_RS13340;product=excinuclease Cho;protein_id=WP_000252397.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 248159 248734 . - . ID=gene-AB69_RS13335;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AB69_RS13335;old_locus_tag=AB69_1903 NZ_JHDO01000084.1 Protein Homology CDS 248159 248734 . - 0 ID=cds-WP_001300480.1;Parent=gene-AB69_RS13335;Dbxref=GenBank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AB69_RS13335;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 248937 249422 . - . ID=gene-AB69_RS13330;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AB69_RS13330;old_locus_tag=AB69_1904 NZ_JHDO01000084.1 Protein Homology CDS 248937 249422 . - 0 ID=cds-WP_001228984.1;Parent=gene-AB69_RS13330;Dbxref=GenBank:WP_001228984.1;Name=WP_001228984.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AB69_RS13330;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228984.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 249752 250720 . - . ID=gene-AB69_RS13325;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AB69_RS13325;old_locus_tag=AB69_1905 NZ_JHDO01000084.1 Protein Homology CDS 249752 250720 . - 0 ID=cds-WP_032231221.1;Parent=gene-AB69_RS13325;Dbxref=GenBank:WP_032231221.1;Name=WP_032231221.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AB69_RS13325;product=succinylglutamate desuccinylase;protein_id=WP_032231221.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 250713 252056 . - . ID=gene-AB69_RS13320;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AB69_RS13320;old_locus_tag=AB69_1906 NZ_JHDO01000084.1 Protein Homology CDS 250713 252056 . - 0 ID=cds-WP_032231223.1;Parent=gene-AB69_RS13320;Dbxref=GenBank:WP_032231223.1;Name=WP_032231223.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AB69_RS13320;product=N-succinylarginine dihydrolase;protein_id=WP_032231223.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 252053 253531 . - . ID=gene-AB69_RS13315;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AB69_RS13315;old_locus_tag=AB69_1907 NZ_JHDO01000084.1 Protein Homology CDS 252053 253531 . - 0 ID=cds-WP_000177206.1;Parent=gene-AB69_RS13315;Dbxref=GenBank:WP_000177206.1;Name=WP_000177206.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AB69_RS13315;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177206.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 253528 254562 . - . ID=gene-AB69_RS13310;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AB69_RS13310;old_locus_tag=AB69_1908 NZ_JHDO01000084.1 Protein Homology CDS 253528 254562 . - 0 ID=cds-WP_000989419.1;Parent=gene-AB69_RS13310;Dbxref=GenBank:WP_000989419.1;Name=WP_000989419.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AB69_RS13310;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 254559 255779 . - . ID=gene-AB69_RS13305;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AB69_RS13305;old_locus_tag=AB69_1909 NZ_JHDO01000084.1 Protein Homology CDS 254559 255779 . - 0 ID=cds-WP_000081983.1;Parent=gene-AB69_RS13305;Dbxref=GenBank:WP_000081983.1;Name=WP_000081983.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AB69_RS13305;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081983.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 256225 257031 . + . ID=gene-AB69_RS13300;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AB69_RS13300;old_locus_tag=AB69_1911 NZ_JHDO01000084.1 Protein Homology CDS 256225 257031 . + 0 ID=cds-WP_000673918.1;Parent=gene-AB69_RS13300;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AB69_RS13300;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 257198 257908 . + . ID=gene-AB69_RS13295;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AB69_RS13295;old_locus_tag=AB69_1912 NZ_JHDO01000084.1 Protein Homology CDS 257198 257908 . + 0 ID=cds-WP_001300395.1;Parent=gene-AB69_RS13295;Dbxref=GenBank:WP_001300395.1;Name=WP_001300395.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AB69_RS13295;product=TVP38/TMEM64 family protein;protein_id=WP_001300395.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 257913 258590 . + . ID=gene-AB69_RS13290;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AB69_RS13290;old_locus_tag=AB69_1913 NZ_JHDO01000084.1 Protein Homology CDS 257913 258590 . + 0 ID=cds-WP_000939212.1;Parent=gene-AB69_RS13290;Dbxref=GenBank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AB69_RS13290;product=lipoprotein YdjY;protein_id=WP_000939212.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 258605 259312 . + . ID=gene-AB69_RS13285;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AB69_RS13285;old_locus_tag=AB69_1914 NZ_JHDO01000084.1 Protein Homology CDS 258605 259312 . + 0 ID=cds-WP_000980098.1;Parent=gene-AB69_RS13285;Dbxref=GenBank:WP_000980098.1;Name=WP_000980098.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416266.1;locus_tag=AB69_RS13285;product=TVP38/TMEM64 family protein;protein_id=WP_000980098.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 259312 259860 . + . ID=gene-AB69_RS13280;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AB69_RS13280;old_locus_tag=AB69_1915 NZ_JHDO01000084.1 Protein Homology CDS 259312 259860 . + 0 ID=cds-WP_000524097.1;Parent=gene-AB69_RS13280;Dbxref=GenBank:WP_000524097.1;Name=WP_000524097.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AB69_RS13280;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524097.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 259870 261036 . + . ID=gene-AB69_RS13275;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AB69_RS13275;old_locus_tag=AB69_1916 NZ_JHDO01000084.1 Protein Homology CDS 259870 261036 . + 0 ID=cds-WP_001215339.1;Parent=gene-AB69_RS13275;Dbxref=GenBank:WP_001215339.1;Name=WP_001215339.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AB69_RS13275;product=ABC transporter substrate-binding protein;protein_id=WP_001215339.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 261009 262544 . + . ID=gene-AB69_RS13270;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AB69_RS13270;old_locus_tag=AB69_1917 NZ_JHDO01000084.1 Protein Homology CDS 261009 262544 . + 0 ID=cds-WP_000224958.1;Parent=gene-AB69_RS13270;Dbxref=GenBank:WP_000224958.1;Name=WP_000224958.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ynjC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=AB69_RS13270;product=ABC transporter permease subunit;protein_id=WP_000224958.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 262544 263197 . + . ID=gene-AB69_RS13265;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AB69_RS13265;old_locus_tag=AB69_1918 NZ_JHDO01000084.1 Protein Homology CDS 262544 263197 . + 0 ID=cds-WP_001300558.1;Parent=gene-AB69_RS13265;Dbxref=GenBank:WP_001300558.1;Name=WP_001300558.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416270.1;locus_tag=AB69_RS13265;product=ATP-binding cassette domain-containing protein;protein_id=WP_001300558.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 263264 264571 . + . ID=gene-AB69_RS13260;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AB69_RS13260;old_locus_tag=AB69_1919 NZ_JHDO01000084.1 Protein Homology CDS 263264 264571 . + 0 ID=cds-WP_032231224.1;Parent=gene-AB69_RS13260;Dbxref=GenBank:WP_032231224.1;Name=WP_032231224.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AB69_RS13260;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_032231224.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 264580 265200 . - . ID=gene-AB69_RS13255;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AB69_RS13255;old_locus_tag=AB69_1920 NZ_JHDO01000084.1 Protein Homology CDS 264580 265200 . - 0 ID=cds-WP_001295484.1;Parent=gene-AB69_RS13255;Dbxref=GenBank:WP_001295484.1;Name=WP_001295484.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AB69_RS13255;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 265287 265694 . + . ID=gene-AB69_RS13250;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AB69_RS13250;old_locus_tag=AB69_1921 NZ_JHDO01000084.1 Protein Homology CDS 265287 265694 . + 0 ID=cds-WP_000781888.1;Parent=gene-AB69_RS13250;Dbxref=GenBank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AB69_RS13250;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 265660 265932 . - . ID=gene-AB69_RS13245;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AB69_RS13245;old_locus_tag=AB69_1922 NZ_JHDO01000084.1 Protein Homology CDS 265660 265932 . - 0 ID=cds-WP_000085240.1;Parent=gene-AB69_RS13245;Dbxref=GenBank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AB69_RS13245;product=YnjH family protein;protein_id=WP_000085240.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 266168 267511 . + . ID=gene-AB69_RS13240;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AB69_RS13240;old_locus_tag=AB69_1924 NZ_JHDO01000084.1 Protein Homology CDS 266168 267511 . + 0 ID=cds-WP_000373021.1;Parent=gene-AB69_RS13240;Dbxref=GenBank:WP_000373021.1;Name=WP_000373021.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416275.1;locus_tag=AB69_RS13240;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373021.1;transl_table=11 NZ_JHDO01000084.1 RefSeq gene 267628 268668 . - . ID=gene-AB69_RS13235;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=protein_coding;locus_tag=AB69_RS13235;old_locus_tag=AB69_1925 NZ_JHDO01000084.1 Protein Homology CDS 267628 268668 . - 0 ID=cds-WP_000756910.1;Parent=gene-AB69_RS13235;Dbxref=GenBank:WP_000756910.1;Name=WP_000756910.1;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AB69_RS13235;product=DUF1266 domain-containing protein;protein_id=WP_000756910.1;transl_table=11 NZ_JHDO01000084.1 RefSeq pseudogene 268828 269380 . + . ID=gene-AB69_RS28660;Name=AB69_RS28660;end_range=269380,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28660;partial=true;pseudo=true NZ_JHDO01000084.1 Protein Homology CDS 268828 269380 . + 0 ID=cds-AB69_RS28660;Parent=gene-AB69_RS28660;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=269380,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28660;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000085.1 1 193338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000085.1 RefSeq region 1 193338 . + . ID=NZ_JHDO01000085.1:1..193338;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000085.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS13225;Name=AB69_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS13225;old_locus_tag=AB69_1927 NZ_JHDO01000085.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-8;Parent=gene-AB69_RS13225;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS13225;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000085.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-8;Parent=gene-AB69_RS13225;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS13225;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 793 2754 . - . ID=gene-AB69_RS13220;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AB69_RS13220;old_locus_tag=AB69_1928 NZ_JHDO01000085.1 Protein Homology CDS 793 2754 . - 0 ID=cds-WP_001235800.1;Parent=gene-AB69_RS13220;Dbxref=GenBank:WP_001235800.1;Name=WP_001235800.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AB69_RS13220;product=DNA topoisomerase III;protein_id=WP_001235800.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 2759 3802 . - . ID=gene-AB69_RS13215;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AB69_RS13215;old_locus_tag=AB69_1929 NZ_JHDO01000085.1 Protein Homology CDS 2759 3802 . - 0 ID=cds-WP_001295485.1;Parent=gene-AB69_RS13215;Dbxref=GenBank:WP_001295485.1;Name=WP_001295485.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416278.1;locus_tag=AB69_RS13215;product=selenide%2C water dikinase SelD;protein_id=WP_001295485.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 3919 4470 . - . ID=gene-AB69_RS13210;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AB69_RS13210;old_locus_tag=AB69_1930 NZ_JHDO01000085.1 Protein Homology CDS 3919 4470 . - 0 ID=cds-WP_000339283.1;Parent=gene-AB69_RS13210;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AB69_RS13210;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 4631 6487 . + . ID=gene-AB69_RS13205;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AB69_RS13205;old_locus_tag=AB69_1931 NZ_JHDO01000085.1 Protein Homology CDS 4631 6487 . + 0 ID=cds-WP_001259810.1;Parent=gene-AB69_RS13205;Dbxref=GenBank:WP_001259810.1;Name=WP_001259810.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AB69_RS13205;product=signal peptide peptidase SppA;protein_id=WP_001259810.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 6654 7670 . + . ID=gene-AB69_RS13200;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AB69_RS13200;old_locus_tag=AB69_1932 NZ_JHDO01000085.1 Protein Homology CDS 6654 7670 . + 0 ID=cds-WP_001170162.1;Parent=gene-AB69_RS13200;Dbxref=GenBank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AB69_RS13200;product=asparaginase;protein_id=WP_001170162.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 7681 8322 . + . ID=gene-AB69_RS13195;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AB69_RS13195;old_locus_tag=AB69_1933 NZ_JHDO01000085.1 Protein Homology CDS 7681 8322 . + 0 ID=cds-WP_001135066.1;Parent=gene-AB69_RS13195;Dbxref=GenBank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AB69_RS13195;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 8415 9773 . - . ID=gene-AB69_RS13190;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AB69_RS13190;old_locus_tag=AB69_1934 NZ_JHDO01000085.1 Protein Homology CDS 8415 9773 . - 0 ID=cds-WP_032231281.1;Parent=gene-AB69_RS13190;Dbxref=GenBank:WP_032231281.1;Name=WP_032231281.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AB69_RS13190;product=MFS transporter;protein_id=WP_032231281.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 9890 10648 . - . ID=gene-AB69_RS13185;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AB69_RS13185;old_locus_tag=AB69_1935 NZ_JHDO01000085.1 Protein Homology CDS 9890 10648 . - 0 ID=cds-WP_000719096.1;Parent=gene-AB69_RS13185;Dbxref=GenBank:WP_000719096.1;Name=WP_000719096.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416284.1;locus_tag=AB69_RS13185;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719096.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 10785 11765 . - . ID=gene-AB69_RS13180;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AB69_RS13180;old_locus_tag=AB69_1936 NZ_JHDO01000085.1 Protein Homology CDS 10785 11765 . - 0 ID=cds-WP_000723710.1;Parent=gene-AB69_RS13180;Dbxref=GenBank:WP_000723710.1;Name=WP_000723710.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AB69_RS13180;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723710.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 11775 12722 . - . ID=gene-AB69_RS13175;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AB69_RS13175;old_locus_tag=AB69_1937 NZ_JHDO01000085.1 Protein Homology CDS 11775 12722 . - 0 ID=cds-WP_000369231.1;Parent=gene-AB69_RS13175;Dbxref=GenBank:WP_000369231.1;Name=WP_000369231.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AB69_RS13175;product=sugar kinase;protein_id=WP_000369231.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 12727 13563 . - . ID=gene-AB69_RS13170;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AB69_RS13170;old_locus_tag=AB69_1938 NZ_JHDO01000085.1 Protein Homology CDS 12727 13563 . - 0 ID=cds-WP_000878893.1;Parent=gene-AB69_RS13170;Dbxref=GenBank:WP_000878893.1;Name=WP_000878893.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AB69_RS13170;product=ketose-bisphosphate aldolase;protein_id=WP_000878893.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 13584 14627 . - . ID=gene-AB69_RS13165;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;locus_tag=AB69_RS13165;old_locus_tag=AB69_1939 NZ_JHDO01000085.1 Protein Homology CDS 13584 14627 . - 0 ID=cds-WP_000798110.1;Parent=gene-AB69_RS13165;Dbxref=GenBank:WP_000798110.1;Name=WP_000798110.1;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AB69_RS13165;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798110.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 14644 16023 . - . ID=gene-AB69_RS13160;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AB69_RS13160;old_locus_tag=AB69_1940 NZ_JHDO01000085.1 Protein Homology CDS 14644 16023 . - 0 ID=cds-WP_032231282.1;Parent=gene-AB69_RS13160;Dbxref=GenBank:WP_032231282.1;Name=WP_032231282.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AB69_RS13160;product=MFS transporter;protein_id=WP_032231282.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 16050 17126 . - . ID=gene-AB69_RS13155;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=protein_coding;locus_tag=AB69_RS13155;old_locus_tag=AB69_1941 NZ_JHDO01000085.1 Protein Homology CDS 16050 17126 . - 0 ID=cds-WP_000645221.1;Parent=gene-AB69_RS13155;Dbxref=GenBank:WP_000645221.1;Name=WP_000645221.1;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AB69_RS13155;product=zinc-binding dehydrogenase;protein_id=WP_000645221.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 17496 17768 . - . ID=gene-AB69_RS13150;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AB69_RS13150;old_locus_tag=AB69_1942 NZ_JHDO01000085.1 Protein Homology CDS 17496 17768 . - 0 ID=cds-WP_001300415.1;Parent=gene-AB69_RS13150;Dbxref=GenBank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416291.4;locus_tag=AB69_RS13150;product=YeaC family protein;protein_id=WP_001300415.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 17810 18223 . - . ID=gene-AB69_RS13145;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AB69_RS13145;old_locus_tag=AB69_1943 NZ_JHDO01000085.1 Protein Homology CDS 17810 18223 . - 0 ID=cds-WP_001284618.1;Parent=gene-AB69_RS13145;Dbxref=GenBank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AB69_RS13145;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 18565 19560 . + . ID=gene-AB69_RS13140;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AB69_RS13140;old_locus_tag=AB69_1944 NZ_JHDO01000085.1 Protein Homology CDS 18565 19560 . + 0 ID=cds-WP_000153502.1;Parent=gene-AB69_RS13140;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AB69_RS13140;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 19644 20528 . + . ID=gene-AB69_RS13135;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AB69_RS13135;old_locus_tag=AB69_1945 NZ_JHDO01000085.1 Protein Homology CDS 19644 20528 . + 0 ID=cds-WP_001335909.1;Parent=gene-AB69_RS13135;Dbxref=GenBank:WP_001335909.1;Name=WP_001335909.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416294.4;locus_tag=AB69_RS13135;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001335909.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 20576 21430 . - . ID=gene-AB69_RS13130;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AB69_RS13130;old_locus_tag=AB69_1946 NZ_JHDO01000085.1 Protein Homology CDS 20576 21430 . - 0 ID=cds-WP_001186371.1;Parent=gene-AB69_RS13130;Dbxref=GenBank:WP_001186371.1;Name=WP_001186371.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AB69_RS13130;product=methylglyoxal reductase YeaE;protein_id=WP_001186371.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 21520 22266 . - . ID=gene-AB69_RS13125;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AB69_RS13125;old_locus_tag=AB69_1947 NZ_JHDO01000085.1 Protein Homology CDS 21520 22266 . - 0 ID=cds-WP_000163771.1;Parent=gene-AB69_RS13125;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AB69_RS13125;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 22702 24636 . + . ID=gene-AB69_RS13120;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AB69_RS13120;old_locus_tag=AB69_1948 NZ_JHDO01000085.1 Protein Homology CDS 22702 24636 . + 0 ID=cds-WP_001019882.1;Parent=gene-AB69_RS13120;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AB69_RS13120;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 24749 26032 . + . ID=gene-AB69_RS13115;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AB69_RS13115;old_locus_tag=AB69_1949 NZ_JHDO01000085.1 Protein Homology CDS 24749 26032 . + 0 ID=cds-WP_000219687.1;Parent=gene-AB69_RS13115;Dbxref=GenBank:WP_000219687.1;Name=WP_000219687.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416298.1;locus_tag=AB69_RS13115;product=YeaH/YhbH family protein;protein_id=WP_000219687.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 26179 27654 . + . ID=gene-AB69_RS13110;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AB69_RS13110;old_locus_tag=AB69_1950 NZ_JHDO01000085.1 Protein Homology CDS 26179 27654 . + 0 ID=cds-WP_000616433.1;Parent=gene-AB69_RS13110;Dbxref=GenBank:WP_000616433.1;Name=WP_000616433.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AB69_RS13110;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616433.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 27835 29325 . + . ID=gene-AB69_RS13105;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AB69_RS13105;old_locus_tag=AB69_1951 NZ_JHDO01000085.1 Protein Homology CDS 27835 29325 . + 0 ID=cds-WP_000766132.1;Parent=gene-AB69_RS13105;Dbxref=GenBank:WP_000766132.1;Name=WP_000766132.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AB69_RS13105;product=diguanylate cyclase DgcJ;protein_id=WP_000766132.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 29368 29871 . + . ID=gene-AB69_RS13100;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AB69_RS13100;old_locus_tag=AB69_1952 NZ_JHDO01000085.1 Protein Homology CDS 29368 29871 . + 0 ID=cds-WP_000138043.1;Parent=gene-AB69_RS13100;Dbxref=GenBank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AB69_RS13100;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138043.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 29872 29976 . - . ID=gene-AB69_RS0124435;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AB69_RS0124435 NZ_JHDO01000085.1 Protein Homology CDS 29872 29976 . - 0 ID=cds-WP_000999630.1;Parent=gene-AB69_RS0124435;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AB69_RS0124435;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 30146 30592 . + . ID=gene-AB69_RS13095;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AB69_RS13095;old_locus_tag=AB69_1953 NZ_JHDO01000085.1 Protein Homology CDS 30146 30592 . + 0 ID=cds-WP_000460707.1;Parent=gene-AB69_RS13095;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AB69_RS13095;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 30549 31370 . - . ID=gene-AB69_RS13090;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AB69_RS13090;old_locus_tag=AB69_1954 NZ_JHDO01000085.1 Protein Homology CDS 30549 31370 . - 0 ID=cds-WP_000972248.1;Parent=gene-AB69_RS13090;Dbxref=GenBank:WP_000972248.1;Name=WP_000972248.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AB69_RS13090;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972248.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 31467 32648 . + . ID=gene-AB69_RS13085;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AB69_RS13085;old_locus_tag=AB69_1955 NZ_JHDO01000085.1 Protein Homology CDS 31467 32648 . + 0 ID=cds-WP_000128491.1;Parent=gene-AB69_RS13085;Dbxref=GenBank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AB69_RS13085;product=2-nitroimidazole transporter;protein_id=WP_000128491.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 32703 33050 . + . ID=gene-AB69_RS13080;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AB69_RS13080;old_locus_tag=AB69_1956 NZ_JHDO01000085.1 Protein Homology CDS 32703 33050 . + 0 ID=cds-WP_001326526.1;Parent=gene-AB69_RS13080;Dbxref=GenBank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AB69_RS13080;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 33072 33326 . - . ID=gene-AB69_RS13075;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AB69_RS13075;old_locus_tag=AB69_1957 NZ_JHDO01000085.1 Protein Homology CDS 33072 33326 . - 0 ID=cds-WP_000691930.1;Parent=gene-AB69_RS13075;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AB69_RS13075;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 33509 34534 . + . ID=gene-AB69_RS13070;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AB69_RS13070;old_locus_tag=AB69_1958 NZ_JHDO01000085.1 Protein Homology CDS 33509 34534 . + 0 ID=cds-WP_001310896.1;Parent=gene-AB69_RS13070;Dbxref=GenBank:WP_001310896.1;Name=WP_001310896.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AB69_RS13070;product=diguanylate cyclase DgcP;protein_id=WP_001310896.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 34567 34665 . + . ID=gene-AB69_RS0124440;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AB69_RS0124440 NZ_JHDO01000085.1 Protein Homology CDS 34567 34665 . + 0 ID=cds-WP_001219350.1;Parent=gene-AB69_RS0124440;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AB69_RS0124440;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 34668 34742 . + . ID=gene-AB69_RS28670;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AB69_RS28670 NZ_JHDO01000085.1 Protein Homology CDS 34668 34742 . + 0 ID=cds-WP_001386836.1;Parent=gene-AB69_RS28670;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AB69_RS28670;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 34801 35049 . - . ID=gene-AB69_RS13065;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AB69_RS13065;old_locus_tag=AB69_1960 NZ_JHDO01000085.1 Protein Homology CDS 34801 35049 . - 0 ID=cds-WP_000512153.1;Parent=gene-AB69_RS13065;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AB69_RS13065;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 35197 35379 . - . ID=gene-AB69_RS13060;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AB69_RS13060;old_locus_tag=AB69_1961 NZ_JHDO01000085.1 Protein Homology CDS 35197 35379 . - 0 ID=cds-WP_000513737.1;Parent=gene-AB69_RS13060;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AB69_RS13060;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 35383 35742 . - . ID=gene-AB69_RS13055;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AB69_RS13055;old_locus_tag=AB69_1962 NZ_JHDO01000085.1 Protein Homology CDS 35383 35742 . - 0 ID=cds-WP_000939317.1;Parent=gene-AB69_RS13055;Dbxref=GenBank:WP_000939317.1;Name=WP_000939317.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AB69_RS13055;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939317.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 35915 36553 . - . ID=gene-AB69_RS13050;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AB69_RS13050;old_locus_tag=AB69_1964 NZ_JHDO01000085.1 Protein Homology CDS 35915 36553 . - 0 ID=cds-WP_000457206.1;Parent=gene-AB69_RS13050;Dbxref=GenBank:WP_000457206.1;Name=WP_000457206.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AB69_RS13050;product=leucine efflux protein LeuE;protein_id=WP_000457206.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 36680 37603 . - . ID=gene-AB69_RS13045;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AB69_RS13045;old_locus_tag=AB69_1965 NZ_JHDO01000085.1 Protein Homology CDS 36680 37603 . - 0 ID=cds-WP_001300522.1;Parent=gene-AB69_RS13045;Dbxref=GenBank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AB69_RS13045;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 37706 38791 . + . ID=gene-AB69_RS13040;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AB69_RS13040;old_locus_tag=AB69_1966 NZ_JHDO01000085.1 Protein Homology CDS 37706 38791 . + 0 ID=cds-WP_032231283.1;Parent=gene-AB69_RS13040;Dbxref=GenBank:WP_032231283.1;Name=WP_032231283.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AB69_RS13040;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_032231283.1;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 38946 40427 . + . ID=gene-AB69_RS13035;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=AB69_RS13035;old_locus_tag=AB69_1967;partial=true;pseudo=true;start_range=.,38946 NZ_JHDO01000085.1 Protein Homology CDS 38946 40427 . + 0 ID=cds-AB69_RS13035;Parent=gene-AB69_RS13035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AB69_RS13035;partial=true;product=BCCT family transporter YeaV;pseudo=true;start_range=.,38946;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 40459 41583 . + . ID=gene-AB69_RS13030;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AB69_RS13030;old_locus_tag=AB69_1968 NZ_JHDO01000085.1 Protein Homology CDS 40459 41583 . + 0 ID=cds-WP_000067822.1;Parent=gene-AB69_RS13030;Dbxref=GenBank:WP_000067822.1;Name=WP_000067822.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AB69_RS13030;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_000067822.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 41639 42604 . + . ID=gene-AB69_RS13025;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AB69_RS13025;old_locus_tag=AB69_1969 NZ_JHDO01000085.1 Protein Homology CDS 41639 42604 . + 0 ID=cds-WP_001287026.1;Parent=gene-AB69_RS13025;Dbxref=GenBank:WP_001287026.1;Name=WP_001287026.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AB69_RS13025;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_001287026.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 42658 43773 . - . ID=gene-AB69_RS13020;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AB69_RS13020;old_locus_tag=AB69_1970 NZ_JHDO01000085.1 Protein Homology CDS 42658 43773 . - 0 ID=cds-WP_001307844.1;Parent=gene-AB69_RS13020;Dbxref=GenBank:WP_001307844.1;Name=WP_001307844.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=AB69_RS13020;product=ribonuclease D;protein_id=WP_001307844.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 43855 45540 . - . ID=gene-AB69_RS13015;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AB69_RS13015;old_locus_tag=AB69_1971 NZ_JHDO01000085.1 Protein Homology CDS 43855 45540 . - 0 ID=cds-WP_000758422.1;Parent=gene-AB69_RS13015;Dbxref=GenBank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AB69_RS13015;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 45745 46326 . - . ID=gene-AB69_RS13010;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AB69_RS13010;old_locus_tag=AB69_1972 NZ_JHDO01000085.1 Protein Homology CDS 45745 46326 . - 0 ID=cds-WP_000290576.1;Parent=gene-AB69_RS13010;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AB69_RS13010;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 46366 47061 . - . ID=gene-AB69_RS13005;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AB69_RS13005;old_locus_tag=AB69_1973 NZ_JHDO01000085.1 Protein Homology CDS 46366 47061 . - 0 ID=cds-WP_001220966.1;Parent=gene-AB69_RS13005;Dbxref=GenBank:WP_001220966.1;Name=WP_001220966.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AB69_RS13005;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 47119 49029 . - . ID=gene-AB69_RS13000;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AB69_RS13000;old_locus_tag=AB69_1974 NZ_JHDO01000085.1 Protein Homology CDS 47119 49029 . - 0 ID=cds-WP_000128847.1;Parent=gene-AB69_RS13000;Dbxref=GenBank:WP_000128847.1;Name=WP_000128847.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AB69_RS13000;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 49161 49505 . + . ID=gene-AB69_RS12995;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AB69_RS12995;old_locus_tag=AB69_1975 NZ_JHDO01000085.1 Protein Homology CDS 49161 49505 . + 0 ID=cds-WP_001295493.1;Parent=gene-AB69_RS12995;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AB69_RS12995;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 49927 50226 . + . ID=gene-AB69_RS12990;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=AB69_RS12990;old_locus_tag=AB69_1977 NZ_JHDO01000085.1 Protein Homology CDS 49927 50226 . + 0 ID=cds-WP_032231285.1;Parent=gene-AB69_RS12990;Dbxref=GenBank:WP_032231285.1;Name=WP_032231285.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AB69_RS12990;product=DUF1889 family protein;protein_id=WP_032231285.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 50346 50525 . - . ID=gene-AB69_RS12985;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AB69_RS12985;old_locus_tag=AB69_1978 NZ_JHDO01000085.1 Protein Homology CDS 50346 50525 . - 0 ID=cds-WP_000457334.1;Parent=gene-AB69_RS12985;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AB69_RS12985;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 50599 51960 . + . ID=gene-AB69_RS12980;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AB69_RS12980;old_locus_tag=AB69_1979 NZ_JHDO01000085.1 Protein Homology CDS 50599 51960 . + 0 ID=cds-WP_032231287.1;Parent=gene-AB69_RS12980;Dbxref=GenBank:WP_032231287.1;Name=WP_032231287.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416326.1;locus_tag=AB69_RS12980;product=aminodeoxychorismate synthase component 1;protein_id=WP_032231287.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 51964 52542 . + . ID=gene-AB69_RS12975;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AB69_RS12975;old_locus_tag=AB69_1980 NZ_JHDO01000085.1 Protein Homology CDS 51964 52542 . + 0 ID=cds-WP_000456715.1;Parent=gene-AB69_RS12975;Dbxref=GenBank:WP_000456715.1;Name=WP_000456715.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416327.1;locus_tag=AB69_RS12975;product=CoA pyrophosphatase;protein_id=WP_000456715.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 52726 54090 . + . ID=gene-AB69_RS12970;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AB69_RS12970;old_locus_tag=AB69_1981 NZ_JHDO01000085.1 Protein Homology CDS 52726 54090 . + 0 ID=cds-WP_000624298.1;Parent=gene-AB69_RS12970;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AB69_RS12970;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 54221 55819 . + . ID=gene-AB69_RS12965;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AB69_RS12965;old_locus_tag=AB69_1982 NZ_JHDO01000085.1 Protein Homology CDS 54221 55819 . + 0 ID=cds-WP_001295494.1;Parent=gene-AB69_RS12965;Dbxref=GenBank:WP_001295494.1;Name=WP_001295494.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AB69_RS12965;product=EAL domain-containing protein;protein_id=WP_001295494.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 55823 57379 . - . ID=gene-AB69_RS12960;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AB69_RS12960;old_locus_tag=AB69_1983 NZ_JHDO01000085.1 Protein Homology CDS 55823 57379 . - 0 ID=cds-WP_000394983.1;Parent=gene-AB69_RS12960;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AB69_RS12960;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 57367 57525 . - . ID=gene-AB69_RS30585;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AB69_RS30585 NZ_JHDO01000085.1 Protein Homology CDS 57367 57525 . - 0 ID=cds-WP_001327808.1;Parent=gene-AB69_RS30585;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AB69_RS30585;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 57842 58813 . + . ID=gene-AB69_RS12955;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AB69_RS12955;old_locus_tag=AB69_1984 NZ_JHDO01000085.1 Protein Homology CDS 57842 58813 . + 0 ID=cds-WP_000150543.1;Parent=gene-AB69_RS12955;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AB69_RS12955;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 58876 59676 . + . ID=gene-AB69_RS12950;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AB69_RS12950;old_locus_tag=AB69_1985 NZ_JHDO01000085.1 Protein Homology CDS 58876 59676 . + 0 ID=cds-WP_000406926.1;Parent=gene-AB69_RS12950;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AB69_RS12950;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 59689 60540 . + . ID=gene-AB69_RS12945;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AB69_RS12945;old_locus_tag=AB69_1986 NZ_JHDO01000085.1 Protein Homology CDS 59689 60540 . + 0 ID=cds-WP_000228655.1;Parent=gene-AB69_RS12945;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AB69_RS12945;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 60595 61053 . + . ID=gene-AB69_RS12940;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AB69_RS12940;old_locus_tag=AB69_1987 NZ_JHDO01000085.1 Protein Homology CDS 60595 61053 . + 0 ID=cds-WP_000156255.1;Parent=gene-AB69_RS12940;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AB69_RS12940;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 61482 62048 . + . ID=gene-AB69_RS12935;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AB69_RS12935;old_locus_tag=AB69_1988 NZ_JHDO01000085.1 Protein Homology CDS 61482 62048 . + 0 ID=cds-WP_001296134.1;Parent=gene-AB69_RS12935;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AB69_RS12935;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 62045 62854 . - . ID=gene-AB69_RS12930;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AB69_RS12930;old_locus_tag=AB69_1989 NZ_JHDO01000085.1 Protein Homology CDS 62045 62854 . - 0 ID=cds-WP_000010115.1;Parent=gene-AB69_RS12930;Dbxref=GenBank:WP_000010115.1;Name=WP_000010115.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AB69_RS12930;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 63020 63229 . - . ID=gene-AB69_RS12925;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB69_RS12925;old_locus_tag=AB69_1990 NZ_JHDO01000085.1 Protein Homology CDS 63020 63229 . - 0 ID=cds-WP_001062678.1;Parent=gene-AB69_RS12925;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AB69_RS12925;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 63242 63385 . - . ID=gene-AB69_RS12920;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AB69_RS12920;old_locus_tag=AB69_1991 NZ_JHDO01000085.1 Protein Homology CDS 63242 63385 . - 0 ID=cds-WP_001295496.1;Parent=gene-AB69_RS12920;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AB69_RS12920;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 64055 64342 . - . ID=gene-AB69_RS12915;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AB69_RS12915;old_locus_tag=AB69_1992 NZ_JHDO01000085.1 Protein Homology CDS 64055 64342 . - 0 ID=cds-WP_001006866.1;Parent=gene-AB69_RS12915;Dbxref=GenBank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AB69_RS12915;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 64417 64560 . - . ID=gene-AB69_RS12910;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AB69_RS12910;old_locus_tag=AB69_1993 NZ_JHDO01000085.1 Protein Homology CDS 64417 64560 . - 0 ID=cds-WP_000714550.1;Parent=gene-AB69_RS12910;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AB69_RS12910;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 64719 64958 . + . ID=gene-AB69_RS12905;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AB69_RS12905;old_locus_tag=AB69_1994 NZ_JHDO01000085.1 Protein Homology CDS 64719 64958 . + 0 ID=cds-WP_001211011.1;Parent=gene-AB69_RS12905;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AB69_RS12905;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 65102 65893 . - . ID=gene-AB69_RS12900;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AB69_RS12900;old_locus_tag=AB69_1995 NZ_JHDO01000085.1 Protein Homology CDS 65102 65893 . - 0 ID=cds-WP_001262203.1;Parent=gene-AB69_RS12900;Dbxref=GenBank:WP_001262203.1;Name=WP_001262203.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416341.1;locus_tag=AB69_RS12900;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262203.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 66070 67443 . + . ID=gene-AB69_RS12895;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AB69_RS12895;old_locus_tag=AB69_1996 NZ_JHDO01000085.1 Protein Homology CDS 66070 67443 . + 0 ID=cds-WP_001127216.1;Parent=gene-AB69_RS12895;Dbxref=GenBank:WP_001127216.1;Name=WP_001127216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AB69_RS12895;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 67489 68370 . - . ID=gene-AB69_RS12890;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AB69_RS12890;old_locus_tag=AB69_1997 NZ_JHDO01000085.1 Protein Homology CDS 67489 68370 . - 0 ID=cds-WP_000984520.1;Parent=gene-AB69_RS12890;Dbxref=GenBank:WP_000984520.1;Name=WP_000984520.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AB69_RS12890;product=protease HtpX;protein_id=WP_000984520.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 68562 70610 . - . ID=gene-AB69_RS12885;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AB69_RS12885;old_locus_tag=AB69_1998 NZ_JHDO01000085.1 Protein Homology CDS 68562 70610 . - 0 ID=cds-WP_001055791.1;Parent=gene-AB69_RS12885;Dbxref=GenBank:WP_001055791.1;Name=WP_001055791.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416344.1;locus_tag=AB69_RS12885;product=carboxy terminal-processing peptidase;protein_id=WP_001055791.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 70630 71328 . - . ID=gene-AB69_RS12880;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AB69_RS12880;old_locus_tag=AB69_1999 NZ_JHDO01000085.1 Protein Homology CDS 70630 71328 . - 0 ID=cds-WP_000431381.1;Parent=gene-AB69_RS12880;Dbxref=GenBank:WP_000431381.1;Name=WP_000431381.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026161.1;locus_tag=AB69_RS12880;product=RNA chaperone ProQ;protein_id=WP_000431381.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 71425 71922 . - . ID=gene-AB69_RS12875;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AB69_RS12875;old_locus_tag=AB69_2000 NZ_JHDO01000085.1 Protein Homology CDS 71425 71922 . - 0 ID=cds-WP_001043877.1;Parent=gene-AB69_RS12875;Dbxref=GenBank:WP_001043877.1;Name=WP_001043877.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=AB69_RS12875;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043877.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 72052 73335 . + . ID=gene-AB69_RS12870;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AB69_RS12870;old_locus_tag=AB69_2001 NZ_JHDO01000085.1 Protein Homology CDS 72052 73335 . + 0 ID=cds-WP_001207282.1;Parent=gene-AB69_RS12870;Dbxref=GenBank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AB69_RS12870;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 73304 75937 . + . ID=gene-AB69_RS12865;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AB69_RS12865;old_locus_tag=AB69_2002 NZ_JHDO01000085.1 Protein Homology CDS 73304 75937 . + 0 ID=cds-WP_001326728.1;Parent=gene-AB69_RS12865;Dbxref=GenBank:WP_001326728.1;Name=WP_001326728.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AB69_RS12865;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001326728.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 76017 77456 . + . ID=gene-AB69_RS12860;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AB69_RS12860;old_locus_tag=AB69_2003 NZ_JHDO01000085.1 Protein Homology CDS 76017 77456 . + 0 ID=cds-WP_001352260.1;Parent=gene-AB69_RS12860;Dbxref=GenBank:WP_001352260.1;Name=WP_001352260.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AB69_RS12860;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001352260.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 77574 77810 . + . ID=gene-AB69_RS12855;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AB69_RS12855;old_locus_tag=AB69_2004 NZ_JHDO01000085.1 Protein Homology CDS 77574 77810 . + 0 ID=cds-WP_001295499.1;Parent=gene-AB69_RS12855;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AB69_RS12855;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 77915 78106 . + . ID=gene-AB69_RS12850;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AB69_RS12850;old_locus_tag=AB69_2005 NZ_JHDO01000085.1 Protein Homology CDS 77915 78106 . + 0 ID=cds-WP_000457842.1;Parent=gene-AB69_RS12850;Dbxref=GenBank:WP_000457842.1;Name=WP_000457842.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AB69_RS12850;product=YebW family protein;protein_id=WP_000457842.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 78107 78763 . - . ID=gene-AB69_RS12845;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AB69_RS12845;old_locus_tag=AB69_2006 NZ_JHDO01000085.1 Protein Homology CDS 78107 78763 . - 0 ID=cds-WP_000812724.1;Parent=gene-AB69_RS12845;Dbxref=GenBank:WP_000812724.1;Name=WP_000812724.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AB69_RS12845;product=protein-serine/threonine phosphatase;protein_id=WP_000812724.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 79159 79500 . - . ID=gene-AB69_RS12840;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AB69_RS12840;old_locus_tag=AB69_2007 NZ_JHDO01000085.1 Protein Homology CDS 79159 79500 . - 0 ID=cds-WP_000976476.1;Parent=gene-AB69_RS12840;Dbxref=GenBank:WP_000976476.1;Name=WP_000976476.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416353.1;locus_tag=AB69_RS12840;product=YebY family protein;protein_id=WP_000976476.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 79513 80385 . - . ID=gene-AB69_RS12835;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AB69_RS12835;old_locus_tag=AB69_2008 NZ_JHDO01000085.1 Protein Homology CDS 79513 80385 . - 0 ID=cds-WP_000879289.1;Parent=gene-AB69_RS12835;Dbxref=GenBank:WP_000879289.1;Name=WP_000879289.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AB69_RS12835;product=copper homeostasis membrane protein CopD;protein_id=WP_000879289.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 80389 80763 . - . ID=gene-AB69_RS12830;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AB69_RS12830;old_locus_tag=AB69_2009 NZ_JHDO01000085.1 Protein Homology CDS 80389 80763 . - 0 ID=cds-WP_000168747.1;Parent=gene-AB69_RS12830;Dbxref=GenBank:WP_000168747.1;Name=WP_000168747.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AB69_RS12830;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 80902 81132 . + . ID=gene-AB69_RS12825;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AB69_RS12825;old_locus_tag=AB69_2010 NZ_JHDO01000085.1 Protein Homology CDS 80902 81132 . + 0 ID=cds-WP_000916763.1;Parent=gene-AB69_RS12825;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AB69_RS12825;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 81234 81890 . + . ID=gene-AB69_RS12820;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AB69_RS12820;old_locus_tag=AB69_2011 NZ_JHDO01000085.1 Protein Homology CDS 81234 81890 . + 0 ID=cds-WP_000011658.1;Parent=gene-AB69_RS12820;Dbxref=GenBank:WP_000011658.1;Name=WP_000011658.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AB69_RS12820;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011658.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 81914 82576 . + . ID=gene-AB69_RS12815;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AB69_RS12815;old_locus_tag=AB69_2012 NZ_JHDO01000085.1 Protein Homology CDS 81914 82576 . + 0 ID=cds-WP_000944256.1;Parent=gene-AB69_RS12815;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AB69_RS12815;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 82573 84633 . - . ID=gene-AB69_RS12810;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AB69_RS12810;old_locus_tag=AB69_2013 NZ_JHDO01000085.1 Protein Homology CDS 82573 84633 . - 0 ID=cds-WP_000936927.1;Parent=gene-AB69_RS12810;Dbxref=GenBank:WP_000936927.1;Name=WP_000936927.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AB69_RS12810;product=oligopeptidase B;protein_id=WP_000936927.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 84842 85501 . - . ID=gene-AB69_RS12805;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AB69_RS12805;old_locus_tag=AB69_2014 NZ_JHDO01000085.1 Protein Homology CDS 84842 85501 . - 0 ID=cds-WP_032231289.1;Parent=gene-AB69_RS12805;Dbxref=GenBank:WP_032231289.1;Name=WP_032231289.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416360.1;locus_tag=AB69_RS12805;product=tellurite resistance TerB family protein;protein_id=WP_032231289.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 85828 86184 . - . ID=gene-AB69_RS12800;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AB69_RS12800;old_locus_tag=AB69_2015 NZ_JHDO01000085.1 Protein Homology CDS 85828 86184 . - 0 ID=cds-WP_001295500.1;Parent=gene-AB69_RS12800;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AB69_RS12800;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 86251 86541 . - . ID=gene-AB69_RS12795;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AB69_RS12795;old_locus_tag=AB69_2016 NZ_JHDO01000085.1 Protein Homology CDS 86251 86541 . - 0 ID=cds-WP_000257738.1;Parent=gene-AB69_RS12795;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AB69_RS12795;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 86675 87853 . + . ID=gene-AB69_RS12790;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AB69_RS12790;old_locus_tag=AB69_2017 NZ_JHDO01000085.1 Protein Homology CDS 86675 87853 . + 0 ID=cds-WP_000173484.1;Parent=gene-AB69_RS12790;Dbxref=GenBank:WP_000173484.1;Name=WP_000173484.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416363.1;locus_tag=AB69_RS12790;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173484.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 87909 88550 . - . ID=gene-AB69_RS12785;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AB69_RS12785;old_locus_tag=AB69_2018 NZ_JHDO01000085.1 Protein Homology CDS 87909 88550 . - 0 ID=cds-WP_000800512.1;Parent=gene-AB69_RS12785;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AB69_RS12785;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 88587 90398 . - . ID=gene-AB69_RS12780;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AB69_RS12780;old_locus_tag=AB69_2019 NZ_JHDO01000085.1 Protein Homology CDS 88587 90398 . - 0 ID=cds-WP_032231291.1;Parent=gene-AB69_RS12780;Dbxref=GenBank:WP_032231291.1;Name=WP_032231291.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AB69_RS12780;product=phosphogluconate dehydratase;protein_id=WP_032231291.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 90633 92108 . - . ID=gene-AB69_RS12775;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AB69_RS12775;old_locus_tag=AB69_2020 NZ_JHDO01000085.1 Protein Homology CDS 90633 92108 . - 0 ID=cds-WP_000301727.1;Parent=gene-AB69_RS12775;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AB69_RS12775;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 92446 93315 . + . ID=gene-AB69_RS12765;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AB69_RS12765;old_locus_tag=AB69_2022 NZ_JHDO01000085.1 Protein Homology CDS 92446 93315 . + 0 ID=cds-WP_001056706.1;Parent=gene-AB69_RS12765;Dbxref=GenBank:WP_001056706.1;Name=WP_001056706.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=AB69_RS12765;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056706.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 93443 94885 . + . ID=gene-AB69_RS12760;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AB69_RS12760;old_locus_tag=AB69_2023 NZ_JHDO01000085.1 Protein Homology CDS 93443 94885 . + 0 ID=cds-WP_000091148.1;Parent=gene-AB69_RS12760;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AB69_RS12760;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 95016 95987 . - . ID=gene-AB69_RS12755;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AB69_RS12755;old_locus_tag=AB69_2024 NZ_JHDO01000085.1 Protein Homology CDS 95016 95987 . - 0 ID=cds-WP_000448381.1;Parent=gene-AB69_RS12755;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AB69_RS12755;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 96107 97429 . - . ID=gene-AB69_RS12750;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AB69_RS12750;old_locus_tag=AB69_2025 NZ_JHDO01000085.1 Protein Homology CDS 96107 97429 . - 0 ID=cds-WP_001184045.1;Parent=gene-AB69_RS12750;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AB69_RS12750;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 97445 98377 . - . ID=gene-AB69_RS12745;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AB69_RS12745;old_locus_tag=AB69_2026 NZ_JHDO01000085.1 Protein Homology CDS 97445 98377 . - 0 ID=cds-WP_032231311.1;Parent=gene-AB69_RS12745;Dbxref=GenBank:WP_032231311.1;Name=WP_032231311.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AB69_RS12745;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_032231311.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 98456 99211 . + . ID=gene-AB69_RS12740;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AB69_RS12740;old_locus_tag=AB69_2027 NZ_JHDO01000085.1 Protein Homology CDS 98456 99211 . + 0 ID=cds-WP_000202996.1;Parent=gene-AB69_RS12740;Dbxref=GenBank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AB69_RS12740;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 99208 99993 . + . ID=gene-AB69_RS12735;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AB69_RS12735;old_locus_tag=AB69_2028 NZ_JHDO01000085.1 Protein Homology CDS 99208 99993 . + 0 ID=cds-WP_000571478.1;Parent=gene-AB69_RS12735;Dbxref=GenBank:WP_000571478.1;Name=WP_000571478.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310596.1;locus_tag=AB69_RS12735;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571478.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 100142 101152 . - . ID=gene-AB69_RS12730;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AB69_RS12730;old_locus_tag=AB69_2029 NZ_JHDO01000085.1 Protein Homology CDS 100142 101152 . - 0 ID=cds-WP_000568519.1;Parent=gene-AB69_RS12730;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AB69_RS12730;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 101161 101772 . - . ID=gene-AB69_RS12725;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AB69_RS12725;old_locus_tag=AB69_2030 NZ_JHDO01000085.1 Protein Homology CDS 101161 101772 . - 0 ID=cds-WP_000580323.1;Parent=gene-AB69_RS12725;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AB69_RS12725;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 101911 101976 . - . ID=gene-AB69_RS28680;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AB69_RS28680 NZ_JHDO01000085.1 Protein Homology CDS 101911 101976 . - 0 ID=cds-WP_010723105.1;Parent=gene-AB69_RS28680;Dbxref=GenBank:WP_010723105.1;Name=WP_010723105.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AB69_RS28680;product=stress response small protein YobI;protein_id=WP_010723105.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 102047 102649 . + . ID=gene-AB69_RS12720;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AB69_RS12720;old_locus_tag=AB69_2031 NZ_JHDO01000085.1 Protein Homology CDS 102047 102649 . + 0 ID=cds-WP_001024929.1;Parent=gene-AB69_RS12720;Dbxref=GenBank:WP_001024929.1;Name=WP_001024929.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AB69_RS12720;product=YebB family permuted papain-like enzyme;protein_id=WP_001024929.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 102651 103172 . - . ID=gene-AB69_RS12715;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AB69_RS12715;old_locus_tag=AB69_2032 NZ_JHDO01000085.1 Protein Homology CDS 102651 103172 . - 0 ID=cds-WP_001295503.1;Parent=gene-AB69_RS12715;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AB69_RS12715;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 103207 103947 . - . ID=gene-AB69_RS12710;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AB69_RS12710;old_locus_tag=AB69_2033 NZ_JHDO01000085.1 Protein Homology CDS 103207 103947 . - 0 ID=cds-WP_000907234.1;Parent=gene-AB69_RS12710;Dbxref=GenBank:WP_000907234.1;Name=WP_000907234.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AB69_RS12710;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907234.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 103976 104428 . - . ID=gene-AB69_RS12705;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AB69_RS12705;old_locus_tag=AB69_2034 NZ_JHDO01000085.1 Protein Homology CDS 103976 104428 . - 0 ID=cds-WP_001300367.1;Parent=gene-AB69_RS12705;Dbxref=GenBank:WP_001300367.1;Name=WP_001300367.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AB69_RS12705;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 104546 106318 . - . ID=gene-AB69_RS12700;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AB69_RS12700;old_locus_tag=AB69_2035 NZ_JHDO01000085.1 Protein Homology CDS 104546 106318 . - 0 ID=cds-WP_001258662.1;Parent=gene-AB69_RS12700;Dbxref=GenBank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AB69_RS12700;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 106628 107194 . + . ID=gene-AB69_RS12695;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AB69_RS12695;old_locus_tag=AB69_2036 NZ_JHDO01000085.1 Protein Homology CDS 106628 107194 . + 0 ID=cds-WP_032231292.1;Parent=gene-AB69_RS12695;Dbxref=GenBank:WP_032231292.1;Name=WP_032231292.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AB69_RS12695;product=hydrolase;protein_id=WP_032231292.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 107191 108009 . + . ID=gene-AB69_RS12690;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AB69_RS12690;old_locus_tag=AB69_2037 NZ_JHDO01000085.1 Protein Homology CDS 107191 108009 . + 0 ID=cds-WP_023568423.1;Parent=gene-AB69_RS12690;Dbxref=GenBank:WP_023568423.1;Name=WP_023568423.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AB69_RS12690;product=DUF72 domain-containing protein;protein_id=WP_023568423.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 108062 108457 . + . ID=gene-AB69_RS12685;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AB69_RS12685;old_locus_tag=AB69_2038 NZ_JHDO01000085.1 Protein Homology CDS 108062 108457 . + 0 ID=cds-WP_000252971.1;Parent=gene-AB69_RS12685;Dbxref=GenBank:WP_000252971.1;Name=WP_000252971.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AB69_RS12685;product=MAPEG family protein;protein_id=WP_000252971.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 108498 109241 . + . ID=gene-AB69_RS12680;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AB69_RS12680;old_locus_tag=AB69_2039 NZ_JHDO01000085.1 Protein Homology CDS 108498 109241 . + 0 ID=cds-WP_000019588.1;Parent=gene-AB69_RS12680;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AB69_RS12680;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 109238 110209 . + . ID=gene-AB69_RS12675;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AB69_RS12675;old_locus_tag=AB69_2040 NZ_JHDO01000085.1 Protein Homology CDS 109238 110209 . + 0 ID=cds-WP_032231293.1;Parent=gene-AB69_RS12675;Dbxref=GenBank:WP_032231293.1;Name=WP_032231293.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310608.1;locus_tag=AB69_RS12675;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_032231293.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 110374 112803 . - . ID=gene-AB69_RS12670;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AB69_RS12670;old_locus_tag=AB69_2041 NZ_JHDO01000085.1 Protein Homology CDS 110374 112803 . - 0 ID=cds-WP_032231294.1;Parent=gene-AB69_RS12670;Dbxref=GenBank:WP_032231294.1;Name=WP_032231294.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AB69_RS12670;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_032231294.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 112828 113928 . - . ID=gene-AB69_RS12665;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AB69_RS12665;old_locus_tag=AB69_2042 NZ_JHDO01000085.1 Protein Homology CDS 112828 113928 . - 0 ID=cds-WP_001214304.1;Parent=gene-AB69_RS12665;Dbxref=GenBank:WP_001214304.1;Name=WP_001214304.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=AB69_RS12665;product=NapC/NirT family cytochrome c;protein_id=WP_001214304.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 114316 115062 . - . ID=gene-AB69_RS12660;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AB69_RS12660;old_locus_tag=AB69_2043 NZ_JHDO01000085.1 Protein Homology CDS 114316 115062 . - 0 ID=cds-WP_001185727.1;Parent=gene-AB69_RS12660;Dbxref=GenBank:WP_001185727.1;Name=WP_001185727.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AB69_RS12660;product=copper homeostasis protein CutC;protein_id=WP_001185727.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 115076 115642 . - . ID=gene-AB69_RS12655;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AB69_RS12655;old_locus_tag=AB69_2044 NZ_JHDO01000085.1 Protein Homology CDS 115076 115642 . - 0 ID=cds-WP_001295504.1;Parent=gene-AB69_RS12655;Dbxref=GenBank:WP_001295504.1;Name=WP_001295504.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AB69_RS12655;product=VOC family protein;protein_id=WP_001295504.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 115858 117591 . + . ID=gene-AB69_RS12650;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AB69_RS12650;old_locus_tag=AB69_2045 NZ_JHDO01000085.1 Protein Homology CDS 115858 117591 . + 0 ID=cds-WP_032231297.1;Parent=gene-AB69_RS12650;Dbxref=GenBank:WP_032231297.1;Name=WP_032231297.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AB69_RS12650;product=arginine--tRNA ligase;protein_id=WP_032231297.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 117633 117677 . - . ID=gene-AB69_RS30300;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AB69_RS30300 NZ_JHDO01000085.1 Protein Homology CDS 117633 117677 . - 0 ID=cds-WP_211180499.1;Parent=gene-AB69_RS30300;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AB69_RS30300;product=protein YecV;protein_id=WP_211180499.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 117768 118256 . + . ID=gene-AB69_RS12645;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AB69_RS12645;old_locus_tag=AB69_2046 NZ_JHDO01000085.1 Protein Homology CDS 117768 118256 . + 0 ID=cds-WP_001602734.1;Parent=gene-AB69_RS12645;Dbxref=GenBank:WP_001602734.1;Name=WP_001602734.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310614.1;locus_tag=AB69_RS12645;product=lysozyme inhibitor LprI family protein;protein_id=WP_001602734.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 118377 118769 . - . ID=gene-AB69_RS0124470;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AB69_RS0124470 NZ_JHDO01000085.1 Protein Homology CDS 118377 118769 . - 0 ID=cds-WP_032231313.1;Parent=gene-AB69_RS0124470;Dbxref=GenBank:WP_032231313.1;Name=WP_032231313.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AB69_RS0124470;product=flagellar protein FlhE;protein_id=WP_032231313.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 118769 120847 . - . ID=gene-AB69_RS12640;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB69_RS12640;old_locus_tag=AB69_2048 NZ_JHDO01000085.1 Protein Homology CDS 118769 120847 . - 0 ID=cds-WP_032231299.1;Parent=gene-AB69_RS12640;Dbxref=GenBank:WP_032231299.1;Name=WP_032231299.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AB69_RS12640;product=flagellar biosynthesis protein FlhA;protein_id=WP_032231299.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 120840 121988 . - . ID=gene-AB69_RS12635;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AB69_RS12635;old_locus_tag=AB69_2049 NZ_JHDO01000085.1 Protein Homology CDS 120840 121988 . - 0 ID=cds-WP_032231300.1;Parent=gene-AB69_RS12635;Dbxref=GenBank:WP_032231300.1;Name=WP_032231300.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AB69_RS12635;product=flagellar biosynthesis protein FlhB;protein_id=WP_032231300.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 122224 123732 . + . ID=gene-AB69_RS12630;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AB69_RS12630;old_locus_tag=AB69_2050 NZ_JHDO01000085.1 Protein Homology CDS 122224 123732 . + 0 ID=cds-WP_032231302.1;Parent=gene-AB69_RS12630;Dbxref=GenBank:WP_032231302.1;Name=WP_032231302.1;Ontology_term=GO:0015949,GO:0008832;gbkey=CDS;gene=dgt;go_function=dGTPase activity|0008832||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311981.1;locus_tag=AB69_RS12630;product=dGTP triphosphohydrolase;protein_id=WP_032231302.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 123701 124453 . + . ID=gene-AB69_RS29990;Name=AB69_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29990;old_locus_tag=AB69_2051 NZ_JHDO01000085.1 GeneMarkS-2+ CDS 123701 124453 . + 0 ID=cds-WP_050428686.1;Parent=gene-AB69_RS29990;Dbxref=GenBank:WP_050428686.1;Name=WP_050428686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29990;product=hypothetical protein;protein_id=WP_050428686.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 124541 125185 . - . ID=gene-AB69_RS12625;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AB69_RS12625;old_locus_tag=AB69_2052 NZ_JHDO01000085.1 Protein Homology CDS 124541 125185 . - 0 ID=cds-WP_000983609.1;Parent=gene-AB69_RS12625;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AB69_RS12625;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 125196 125585 . - . ID=gene-AB69_RS12620;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AB69_RS12620;old_locus_tag=AB69_2053 NZ_JHDO01000085.1 Protein Homology CDS 125196 125585 . - 0 ID=cds-WP_000763867.1;Parent=gene-AB69_RS12620;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AB69_RS12620;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 125600 126649 . - . ID=gene-AB69_RS12615;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AB69_RS12615;old_locus_tag=AB69_2054 NZ_JHDO01000085.1 Protein Homology CDS 125600 126649 . - 0 ID=cds-WP_000036371.1;Parent=gene-AB69_RS12615;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AB69_RS12615;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 126652 127512 . - . ID=gene-AB69_RS12610;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AB69_RS12610;old_locus_tag=AB69_2055 NZ_JHDO01000085.1 Protein Homology CDS 126652 127512 . - 0 ID=cds-WP_000204337.1;Parent=gene-AB69_RS12610;Dbxref=GenBank:WP_000204337.1;Name=WP_000204337.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AB69_RS12610;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204337.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 127531 129132 . - . ID=gene-AB69_RS12605;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB69_RS12605;old_locus_tag=AB69_2056 NZ_JHDO01000085.1 Protein Homology CDS 127531 129132 . - 0 ID=cds-WP_000483239.1;Parent=gene-AB69_RS12605;Dbxref=GenBank:WP_000483239.1;Name=WP_000483239.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AB69_RS12605;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483239.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 129178 130839 . - . ID=gene-AB69_RS12600;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AB69_RS12600;old_locus_tag=AB69_2057 NZ_JHDO01000085.1 Protein Homology CDS 129178 130839 . - 0 ID=cds-WP_001297437.1;Parent=gene-AB69_RS12600;Dbxref=GenBank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AB69_RS12600;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 130984 131487 . - . ID=gene-AB69_RS12595;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AB69_RS12595;old_locus_tag=AB69_2058 NZ_JHDO01000085.1 Protein Homology CDS 130984 131487 . - 0 ID=cds-WP_000147302.1;Parent=gene-AB69_RS12595;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AB69_RS12595;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 131508 133472 . - . ID=gene-AB69_RS12590;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AB69_RS12590;old_locus_tag=AB69_2059 NZ_JHDO01000085.1 Protein Homology CDS 131508 133472 . - 0 ID=cds-WP_001300654.1;Parent=gene-AB69_RS12590;Dbxref=GenBank:WP_001300654.1;Name=WP_001300654.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283911.1;locus_tag=AB69_RS12590;product=chemotaxis protein CheA;protein_id=WP_001300654.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 133477 134403 . - . ID=gene-AB69_RS12585;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AB69_RS12585;old_locus_tag=AB69_2060 NZ_JHDO01000085.1 Protein Homology CDS 133477 134403 . - 0 ID=cds-WP_000795630.1;Parent=gene-AB69_RS12585;Dbxref=GenBank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AB69_RS12585;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 134400 135287 . - . ID=gene-AB69_RS12580;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AB69_RS12580;old_locus_tag=AB69_2061 NZ_JHDO01000085.1 Protein Homology CDS 134400 135287 . - 0 ID=cds-WP_000906340.1;Parent=gene-AB69_RS12580;Dbxref=GenBank:WP_000906340.1;Name=WP_000906340.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AB69_RS12580;product=flagellar motor stator protein MotA;protein_id=WP_000906340.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 135414 135992 . - . ID=gene-AB69_RS12575;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AB69_RS12575;old_locus_tag=AB69_2062 NZ_JHDO01000085.1 Protein Homology CDS 135414 135992 . - 0 ID=cds-WP_001291603.1;Parent=gene-AB69_RS12575;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AB69_RS12575;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 135995 136345 . - . ID=gene-AB69_RS12570;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AB69_RS12570;old_locus_tag=AB69_2063 NZ_JHDO01000085.1 Protein Homology CDS 135995 136345 . - 0 ID=cds-WP_001295647.1;Parent=gene-AB69_RS12570;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AB69_RS12570;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 137124 137552 . + . ID=gene-AB69_RS12565;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AB69_RS12565;old_locus_tag=AB69_2064 NZ_JHDO01000085.1 Protein Homology CDS 137124 137552 . + 0 ID=cds-WP_000122434.1;Parent=gene-AB69_RS12565;Dbxref=GenBank:WP_000122434.1;Name=WP_000122434.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AB69_RS12565;product=universal stress protein UspC;protein_id=WP_000122434.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 137559 138983 . - . ID=gene-AB69_RS12560;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AB69_RS12560;old_locus_tag=AB69_2065 NZ_JHDO01000085.1 Protein Homology CDS 137559 138983 . - 0 ID=cds-WP_001295646.1;Parent=gene-AB69_RS12560;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AB69_RS12560;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 138958 139758 . - . ID=gene-AB69_RS12555;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AB69_RS12555;old_locus_tag=AB69_2066 NZ_JHDO01000085.1 Protein Homology CDS 138958 139758 . - 0 ID=cds-WP_001336489.1;Parent=gene-AB69_RS12555;Dbxref=GenBank:WP_001336489.1;Name=WP_001336489.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AB69_RS12555;product=trehalose-phosphatase;protein_id=WP_001336489.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 139925 140911 . - . ID=gene-AB69_RS12550;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AB69_RS12550;old_locus_tag=AB69_2067 NZ_JHDO01000085.1 Protein Homology CDS 139925 140911 . - 0 ID=cds-WP_001301339.1;Parent=gene-AB69_RS12550;Dbxref=GenBank:WP_001301339.1;Name=WP_001301339.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AB69_RS12550;product=arabinose ABC transporter permease AraH;protein_id=WP_001301339.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 140926 142440 . - . ID=gene-AB69_RS12545;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AB69_RS12545;old_locus_tag=AB69_2068 NZ_JHDO01000085.1 Protein Homology CDS 140926 142440 . - 0 ID=cds-WP_001187810.1;Parent=gene-AB69_RS12545;Dbxref=GenBank:WP_001187810.1;Name=WP_001187810.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AB69_RS12545;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187810.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 142510 143499 . - . ID=gene-AB69_RS12540;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AB69_RS12540;old_locus_tag=AB69_2069 NZ_JHDO01000085.1 Protein Homology CDS 142510 143499 . - 0 ID=cds-WP_000548675.1;Parent=gene-AB69_RS12540;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AB69_RS12540;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 144296 144799 . + . ID=gene-AB69_RS12535;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AB69_RS12535;old_locus_tag=AB69_2070 NZ_JHDO01000085.1 Protein Homology CDS 144296 144799 . + 0 ID=cds-WP_000179469.1;Parent=gene-AB69_RS12535;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AB69_RS12535;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 144878 145129 . - . ID=gene-AB69_RS12530;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AB69_RS12530;old_locus_tag=AB69_2071 NZ_JHDO01000085.1 Protein Homology CDS 144878 145129 . - 0 ID=cds-WP_000082127.1;Parent=gene-AB69_RS12530;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AB69_RS12530;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 145245 145331 . - . ID=gene-AB69_RS28690;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AB69_RS28690 NZ_JHDO01000085.1 Protein Homology CDS 145245 145331 . - 0 ID=cds-WP_010723106.1;Parent=gene-AB69_RS28690;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AB69_RS28690;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 145594 145917 . + . ID=gene-AB69_RS0124480;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AB69_RS0124480;old_locus_tag=AB69_2074 NZ_JHDO01000085.1 Protein Homology CDS 145594 145917 . + 0 ID=cds-WP_001237877.1;Parent=gene-AB69_RS0124480;Dbxref=GenBank:WP_001237877.1;Name=WP_001237877.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AB69_RS0124480;product=YecR-like lipofamily protein;protein_id=WP_001237877.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 146088 146585 . + . ID=gene-AB69_RS12520;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AB69_RS12520;old_locus_tag=AB69_2076 NZ_JHDO01000085.1 Protein Homology CDS 146088 146585 . + 0 ID=cds-WP_000917208.1;Parent=gene-AB69_RS12520;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AB69_RS12520;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 146623 146862 . - . ID=gene-AB69_RS12515;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AB69_RS12515;old_locus_tag=AB69_2077 NZ_JHDO01000085.1 Protein Homology CDS 146623 146862 . - 0 ID=cds-WP_000377223.1;Parent=gene-AB69_RS12515;Dbxref=GenBank:WP_000377223.1;Name=WP_000377223.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AB69_RS12515;product=YecH family metal-binding protein;protein_id=WP_000377223.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 147053 148264 . + . ID=gene-AB69_RS12510;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AB69_RS12510;old_locus_tag=AB69_2079 NZ_JHDO01000085.1 Protein Homology CDS 147053 148264 . + 0 ID=cds-WP_000797573.1;Parent=gene-AB69_RS12510;Dbxref=GenBank:WP_000797573.1;Name=WP_000797573.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AB69_RS12510;product=tyrosine transporter TyrP;protein_id=WP_000797573.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 148326 148991 . - . ID=gene-AB69_RS12505;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AB69_RS12505;old_locus_tag=AB69_2080 NZ_JHDO01000085.1 Protein Homology CDS 148326 148991 . - 0 ID=cds-WP_000847902.1;Parent=gene-AB69_RS12505;Dbxref=GenBank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=AB69_RS12505;product=UPF0149 family protein YecA;protein_id=WP_000847902.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 149187 149273 . - . ID=gene-AB69_RS12500;Name=AB69_RS12500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12500;old_locus_tag=AB69_2081 NZ_JHDO01000085.1 tRNAscan-SE tRNA 149187 149273 . - . ID=rna-AB69_RS12500;Parent=gene-AB69_RS12500;anticodon=(pos:complement(149237..149239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12500;product=tRNA-Leu NZ_JHDO01000085.1 tRNAscan-SE exon 149187 149273 . - . ID=exon-AB69_RS12500-1;Parent=rna-AB69_RS12500;anticodon=(pos:complement(149237..149239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12500;product=tRNA-Leu NZ_JHDO01000085.1 RefSeq gene 149286 149359 . - . ID=gene-AB69_RS12495;Name=AB69_RS12495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12495;old_locus_tag=AB69_2082 NZ_JHDO01000085.1 tRNAscan-SE tRNA 149286 149359 . - . ID=rna-AB69_RS12495;Parent=gene-AB69_RS12495;anticodon=(pos:complement(149325..149327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12495;product=tRNA-Cys NZ_JHDO01000085.1 tRNAscan-SE exon 149286 149359 . - . ID=exon-AB69_RS12495-1;Parent=rna-AB69_RS12495;anticodon=(pos:complement(149325..149327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12495;product=tRNA-Cys NZ_JHDO01000085.1 RefSeq gene 149414 149489 . - . ID=gene-AB69_RS12490;Name=AB69_RS12490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12490;old_locus_tag=AB69_2083 NZ_JHDO01000085.1 tRNAscan-SE tRNA 149414 149489 . - . ID=rna-AB69_RS12490;Parent=gene-AB69_RS12490;anticodon=(pos:complement(149454..149456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12490;product=tRNA-Gly NZ_JHDO01000085.1 tRNAscan-SE exon 149414 149489 . - . ID=exon-AB69_RS12490-1;Parent=rna-AB69_RS12490;anticodon=(pos:complement(149454..149456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12490;product=tRNA-Gly NZ_JHDO01000085.1 RefSeq gene 149641 150189 . - . ID=gene-AB69_RS12485;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AB69_RS12485;old_locus_tag=AB69_2084 NZ_JHDO01000085.1 Protein Homology CDS 149641 150189 . - 0 ID=cds-WP_001160187.1;Parent=gene-AB69_RS12485;Dbxref=GenBank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AB69_RS12485;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 150246 152078 . - . ID=gene-AB69_RS12480;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AB69_RS12480;old_locus_tag=AB69_2085 NZ_JHDO01000085.1 Protein Homology CDS 150246 152078 . - 0 ID=cds-WP_001283421.1;Parent=gene-AB69_RS12480;Dbxref=GenBank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AB69_RS12480;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 152075 152731 . - . ID=gene-AB69_RS12475;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AB69_RS12475;old_locus_tag=AB69_2086 NZ_JHDO01000085.1 Protein Homology CDS 152075 152731 . - 0 ID=cds-WP_000611335.1;Parent=gene-AB69_RS12475;Dbxref=GenBank:WP_000611335.1;Name=WP_000611335.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416424.1;locus_tag=AB69_RS12475;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611335.1;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 152873 152944 . + . ID=gene-AB69_RS30725;Name=AB69_RS30725;end_range=152944,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30725;partial=true;pseudo=true NZ_JHDO01000085.1 Protein Homology CDS 152873 152944 . + 0 ID=cds-AB69_RS30725;Parent=gene-AB69_RS30725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=152944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AB69_RS30725;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 153027 153203 . + . ID=gene-AB69_RS29805;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AB69_RS29805 NZ_JHDO01000085.1 Protein Homology CDS 153027 153203 . + 0 ID=cds-WP_032231304.1;Parent=gene-AB69_RS29805;Dbxref=GenBank:WP_032231304.1;Name=WP_032231304.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AB69_RS29805;product=protein YecU;protein_id=WP_032231304.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 153190 153414 . + . ID=gene-AB69_RS12470;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AB69_RS12470;old_locus_tag=AB69_2088 NZ_JHDO01000085.1 Protein Homology CDS 153190 153414 . + 0 ID=cds-WP_000106474.1;Parent=gene-AB69_RS12470;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AB69_RS12470;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 153481 154203 . - . ID=gene-AB69_RS12465;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AB69_RS12465;old_locus_tag=AB69_2089 NZ_JHDO01000085.1 Protein Homology CDS 153481 154203 . - 0 ID=cds-WP_001154267.1;Parent=gene-AB69_RS12465;Dbxref=GenBank:WP_001154267.1;Name=WP_001154267.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AB69_RS12465;product=transcriptional regulator SdiA;protein_id=WP_001154267.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 154433 155185 . - . ID=gene-AB69_RS12460;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AB69_RS12460;old_locus_tag=AB69_2090 NZ_JHDO01000085.1 Protein Homology CDS 154433 155185 . - 0 ID=cds-WP_001272994.1;Parent=gene-AB69_RS12460;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AB69_RS12460;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 155182 155850 . - . ID=gene-AB69_RS12455;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AB69_RS12455;old_locus_tag=AB69_2091 NZ_JHDO01000085.1 Protein Homology CDS 155182 155850 . - 0 ID=cds-WP_001158220.1;Parent=gene-AB69_RS12455;Dbxref=GenBank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AB69_RS12455;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 155865 156851 . - . ID=gene-AB69_RS12450;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AB69_RS12450;old_locus_tag=AB69_2092 NZ_JHDO01000085.1 Protein Homology CDS 155865 156851 . - 0 ID=cds-WP_001128222.1;Parent=gene-AB69_RS12450;Dbxref=GenBank:WP_001128222.1;Name=WP_001128222.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AB69_RS12450;product=D-cysteine desulfhydrase;protein_id=WP_001128222.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 156956 157756 . - . ID=gene-AB69_RS12445;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AB69_RS12445;old_locus_tag=AB69_2093 NZ_JHDO01000085.1 Protein Homology CDS 156956 157756 . - 0 ID=cds-WP_001317901.1;Parent=gene-AB69_RS12445;Dbxref=GenBank:WP_001317901.1;Name=WP_001317901.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AB69_RS12445;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001317901.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 157844 158395 . - . ID=gene-AB69_RS12440;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AB69_RS12440;old_locus_tag=AB69_2094 NZ_JHDO01000085.1 Protein Homology CDS 157844 158395 . - 0 ID=cds-WP_001317902.1;Parent=gene-AB69_RS12440;Dbxref=GenBank:WP_001317902.1;Name=WP_001317902.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AB69_RS12440;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001317902.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 158441 159160 . - . ID=gene-AB69_RS12435;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AB69_RS12435;old_locus_tag=AB69_2095 NZ_JHDO01000085.1 Protein Homology CDS 158441 159160 . - 0 ID=cds-WP_001087467.1;Parent=gene-AB69_RS12435;Dbxref=GenBank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AB69_RS12435;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 159324 160373 . - . ID=gene-AB69_RS12430;Name=AB69_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12430;old_locus_tag=AB69_2096 NZ_JHDO01000085.1 Protein Homology CDS 159324 160373 . - 0 ID=cds-WP_000079759.1;Parent=gene-AB69_RS12430;Dbxref=GenBank:WP_000079759.1;Name=WP_000079759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079755.1;locus_tag=AB69_RS12430;product=flagellin FliC;protein_id=WP_000079759.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 160621 162036 . + . ID=gene-AB69_RS12425;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AB69_RS12425;old_locus_tag=AB69_2097 NZ_JHDO01000085.1 Protein Homology CDS 160621 162036 . + 0 ID=cds-WP_000146830.1;Parent=gene-AB69_RS12425;Dbxref=GenBank:WP_000146830.1;Name=WP_000146830.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AB69_RS12425;product=flagellar filament capping protein FliD;protein_id=WP_000146830.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 162052 162462 . + . ID=gene-AB69_RS12420;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AB69_RS12420;old_locus_tag=AB69_2098 NZ_JHDO01000085.1 Protein Homology CDS 162052 162462 . + 0 ID=cds-WP_000270663.1;Parent=gene-AB69_RS12420;Dbxref=GenBank:WP_000270663.1;Name=WP_000270663.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AB69_RS12420;product=flagellar export chaperone FliS;protein_id=WP_000270663.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 162462 162827 . + . ID=gene-AB69_RS12415;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AB69_RS12415;old_locus_tag=AB69_2099 NZ_JHDO01000085.1 Protein Homology CDS 162462 162827 . + 0 ID=cds-WP_001057840.1;Parent=gene-AB69_RS12415;Dbxref=GenBank:WP_001057840.1;Name=WP_001057840.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707812.1;locus_tag=AB69_RS12415;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001057840.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 162905 164392 . + . ID=gene-AB69_RS12410;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AB69_RS12410;old_locus_tag=AB69_2100 NZ_JHDO01000085.1 Protein Homology CDS 162905 164392 . + 0 ID=cds-WP_001245699.1;Parent=gene-AB69_RS12410;Dbxref=GenBank:WP_001245699.1;Name=WP_001245699.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AB69_RS12410;product=alpha-amylase;protein_id=WP_001245699.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 164426 164839 . - . ID=gene-AB69_RS12405;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AB69_RS12405;old_locus_tag=AB69_2101 NZ_JHDO01000085.1 Protein Homology CDS 164426 164839 . - 0 ID=cds-WP_001295642.1;Parent=gene-AB69_RS12405;Dbxref=GenBank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AB69_RS12405;product=lipoprotein YedD;protein_id=WP_001295642.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 165026 166231 . + . ID=gene-AB69_RS12400;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AB69_RS12400;old_locus_tag=AB69_2102 NZ_JHDO01000085.1 Protein Homology CDS 165026 166231 . + 0 ID=cds-WP_000118890.1;Parent=gene-AB69_RS12400;Dbxref=GenBank:WP_000118890.1;Name=WP_000118890.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AB69_RS12400;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118890.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 166228 166461 . + . ID=gene-AB69_RS12395;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AB69_RS12395;old_locus_tag=AB69_2103 NZ_JHDO01000085.1 Protein Homology CDS 166228 166461 . + 0 ID=cds-WP_000790504.1;Parent=gene-AB69_RS12395;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AB69_RS12395;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 166570 166995 . + . ID=gene-AB69_RS12390;Name=AB69_RS12390;end_range=166995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS12390;old_locus_tag=AB69_2104;partial=true;pseudo=true NZ_JHDO01000085.1 Protein Homology CDS 166570 166995 . + 0 ID=cds-AB69_RS12390;Parent=gene-AB69_RS12390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006974,GO:0003697;end_range=166995,.;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310697.1;locus_tag=AB69_RS12390;partial=true;product=SOS response-associated peptidase family protein;pseudo=true;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 166988 167278 . - . ID=gene-AB69_RS27110;Name=AB69_RS27110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27110;partial=true;pseudo=true;start_range=.,166988 NZ_JHDO01000085.1 Protein Homology CDS 166988 167278 . - 0 ID=cds-AB69_RS27110;Parent=gene-AB69_RS27110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AB69_RS27110;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,166988;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 167301 167825 . + . ID=gene-AB69_RS27115;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB69_RS27115 NZ_JHDO01000085.1 Protein Homology CDS 167301 167825 . + 0 ID=cds-WP_015674555.1;Parent=gene-AB69_RS27115;Dbxref=GenBank:WP_015674555.1;Name=WP_015674555.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529744.1;locus_tag=AB69_RS27115;product=IS200/IS605 family transposase;protein_id=WP_015674555.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 167982 168779 . - . ID=gene-AB69_RS12385;Name=ybcM;gbkey=Gene;gene=ybcM;gene_biotype=protein_coding;locus_tag=AB69_RS12385;old_locus_tag=AB69_2105 NZ_JHDO01000085.1 Protein Homology CDS 167982 168779 . - 0 ID=cds-WP_000879825.1;Parent=gene-AB69_RS12385;Dbxref=GenBank:WP_000879825.1;Name=WP_000879825.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ybcM;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=AB69_RS12385;product=helix-turn-helix transcriptional regulator;protein_id=WP_000879825.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 168789 169340 . - . ID=gene-AB69_RS0124495;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=AB69_RS0124495 NZ_JHDO01000085.1 Protein Homology CDS 168789 169340 . - 0 ID=cds-WP_001310919.1;Parent=gene-AB69_RS0124495;Dbxref=GenBank:WP_001310919.1;Name=WP_001310919.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=AB69_RS0124495;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_001310919.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 169509 169841 . - . ID=gene-AB69_RS12380;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AB69_RS12380;old_locus_tag=AB69_2107 NZ_JHDO01000085.1 Protein Homology CDS 169509 169841 . - 0 ID=cds-WP_001070440.1;Parent=gene-AB69_RS12380;Dbxref=GenBank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=AB69_RS12380;product=multidrug efflux SMR transporter EmrE;protein_id=WP_001070440.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 170185 170499 . - . ID=gene-AB69_RS12375;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AB69_RS12375;old_locus_tag=AB69_2108 NZ_JHDO01000085.1 Protein Homology CDS 170185 170499 . - 0 ID=cds-WP_001301376.1;Parent=gene-AB69_RS12375;Dbxref=GenBank:WP_001301376.1;Name=WP_001301376.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AB69_RS12375;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001301376.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 170714 172372 . + . ID=gene-AB69_RS12370;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AB69_RS12370;old_locus_tag=AB69_2109 NZ_JHDO01000085.1 Protein Homology CDS 170714 172372 . + 0 ID=cds-WP_032231306.1;Parent=gene-AB69_RS12370;Dbxref=GenBank:WP_032231306.1;Name=WP_032231306.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416448.1;locus_tag=AB69_RS12370;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_032231306.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 172365 173360 . + . ID=gene-AB69_RS12365;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AB69_RS12365;old_locus_tag=AB69_2110 NZ_JHDO01000085.1 Protein Homology CDS 172365 173360 . + 0 ID=cds-WP_000067950.1;Parent=gene-AB69_RS12365;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AB69_RS12365;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 173353 174039 . + . ID=gene-AB69_RS12360;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AB69_RS12360;old_locus_tag=AB69_2111 NZ_JHDO01000085.1 Protein Homology CDS 173353 174039 . + 0 ID=cds-WP_001282706.1;Parent=gene-AB69_RS12360;Dbxref=GenBank:WP_001282706.1;Name=WP_001282706.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AB69_RS12360;product=flagellar assembly protein FliH;protein_id=WP_001282706.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 174039 175412 . + . ID=gene-AB69_RS12355;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AB69_RS12355;old_locus_tag=AB69_2112 NZ_JHDO01000085.1 Protein Homology CDS 174039 175412 . + 0 ID=cds-WP_000213294.1;Parent=gene-AB69_RS12355;Dbxref=GenBank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AB69_RS12355;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 175431 175874 . + . ID=gene-AB69_RS12350;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AB69_RS12350;old_locus_tag=AB69_2113 NZ_JHDO01000085.1 Protein Homology CDS 175431 175874 . + 0 ID=cds-WP_000807584.1;Parent=gene-AB69_RS12350;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AB69_RS12350;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 175871 176998 . + . ID=gene-AB69_RS12345;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AB69_RS12345;old_locus_tag=AB69_2114 NZ_JHDO01000085.1 Protein Homology CDS 175871 176998 . + 0 ID=cds-WP_000620097.1;Parent=gene-AB69_RS12345;Dbxref=GenBank:WP_000620097.1;Name=WP_000620097.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AB69_RS12345;product=flagellar hook-length control protein FliK;protein_id=WP_000620097.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 177103 177567 . + . ID=gene-AB69_RS12340;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AB69_RS12340;old_locus_tag=AB69_2115 NZ_JHDO01000085.1 Protein Homology CDS 177103 177567 . + 0 ID=cds-WP_000133106.1;Parent=gene-AB69_RS12340;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AB69_RS12340;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 177572 178576 . + . ID=gene-AB69_RS12335;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AB69_RS12335;old_locus_tag=AB69_2116 NZ_JHDO01000085.1 Protein Homology CDS 177572 178576 . + 0 ID=cds-WP_001295641.1;Parent=gene-AB69_RS12335;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AB69_RS12335;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 178573 178986 . + . ID=gene-AB69_RS12330;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AB69_RS12330;old_locus_tag=AB69_2117 NZ_JHDO01000085.1 Protein Homology CDS 178573 178986 . + 0 ID=cds-WP_001282098.1;Parent=gene-AB69_RS12330;Dbxref=GenBank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AB69_RS12330;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 178989 179354 . + . ID=gene-AB69_RS12325;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AB69_RS12325;old_locus_tag=AB69_2118 NZ_JHDO01000085.1 Protein Homology CDS 178989 179354 . + 0 ID=cds-WP_001059114.1;Parent=gene-AB69_RS12325;Dbxref=GenBank:WP_001059114.1;Name=WP_001059114.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AB69_RS12325;product=flagellar biosynthetic protein FliO;protein_id=WP_001059114.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 179354 180091 . + . ID=gene-AB69_RS12320;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AB69_RS12320;old_locus_tag=AB69_2119 NZ_JHDO01000085.1 Protein Homology CDS 179354 180091 . + 0 ID=cds-WP_001253441.1;Parent=gene-AB69_RS12320;Dbxref=GenBank:WP_001253441.1;Name=WP_001253441.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AB69_RS12320;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 180101 180370 . + . ID=gene-AB69_RS12315;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AB69_RS12315;old_locus_tag=AB69_2120 NZ_JHDO01000085.1 Protein Homology CDS 180101 180370 . + 0 ID=cds-WP_000187358.1;Parent=gene-AB69_RS12315;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AB69_RS12315;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 180379 181164 . + . ID=gene-AB69_RS12310;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AB69_RS12310;old_locus_tag=AB69_2121 NZ_JHDO01000085.1 Protein Homology CDS 180379 181164 . + 0 ID=cds-WP_000983976.1;Parent=gene-AB69_RS12310;Dbxref=GenBank:WP_000983976.1;Name=WP_000983976.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AB69_RS12310;product=flagellar biosynthetic protein FliR;protein_id=WP_000983976.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 181454 182077 . + . ID=gene-AB69_RS12305;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AB69_RS12305;old_locus_tag=AB69_2122 NZ_JHDO01000085.1 Protein Homology CDS 181454 182077 . + 0 ID=cds-WP_000103987.1;Parent=gene-AB69_RS12305;Dbxref=GenBank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AB69_RS12305;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 182121 182309 . - . ID=gene-AB69_RS12300;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AB69_RS12300;old_locus_tag=AB69_2123 NZ_JHDO01000085.1 Protein Homology CDS 182121 182309 . - 0 ID=cds-WP_000867217.1;Parent=gene-AB69_RS12300;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AB69_RS12300;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 182472 182699 . + . ID=gene-AB69_RS12295;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AB69_RS12295;old_locus_tag=AB69_2124 NZ_JHDO01000085.1 Protein Homology CDS 182472 182699 . + 0 ID=cds-WP_000844800.1;Parent=gene-AB69_RS12295;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AB69_RS12295;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 182998 183813 . + . ID=gene-AB69_RS12290;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AB69_RS12290;old_locus_tag=AB69_2125 NZ_JHDO01000085.1 Protein Homology CDS 182998 183813 . + 0 ID=cds-WP_000491522.1;Parent=gene-AB69_RS12290;Dbxref=GenBank:WP_000491522.1;Name=WP_000491522.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416464.1;locus_tag=AB69_RS12290;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491522.1;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 183810 185504 . - . ID=gene-AB69_RS0124510;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=pseudogene;locus_tag=AB69_RS0124510;pseudo=true NZ_JHDO01000085.1 Protein Homology CDS 183810 185504 . - 0 ID=cds-AB69_RS0124510;Parent=gene-AB69_RS0124510;Note=internal stop;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AB69_RS0124510;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;pseudo=true;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 185675 185857 . - . ID=gene-AB69_RS12285;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AB69_RS12285;old_locus_tag=AB69_2128 NZ_JHDO01000085.1 Protein Homology CDS 185675 185857 . - 0 ID=cds-WP_000009307.1;Parent=gene-AB69_RS12285;Dbxref=GenBank:WP_000009307.1;Name=WP_000009307.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AB69_RS12285;product=YodC family protein;protein_id=WP_000009307.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 185936 186853 . - . ID=gene-AB69_RS12280;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AB69_RS12280;old_locus_tag=AB69_2129 NZ_JHDO01000085.1 Protein Homology CDS 185936 186853 . - 0 ID=cds-WP_000922679.1;Parent=gene-AB69_RS12280;Dbxref=GenBank:WP_000922679.1;Name=WP_000922679.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AB69_RS12280;product=DUF808 domain-containing protein;protein_id=WP_000922679.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 187026 187946 . + . ID=gene-AB69_RS12275;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AB69_RS12275;old_locus_tag=AB69_2130 NZ_JHDO01000085.1 Protein Homology CDS 187026 187946 . + 0 ID=cds-WP_001212216.1;Parent=gene-AB69_RS12275;Dbxref=GenBank:WP_001212216.1;Name=WP_001212216.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AB69_RS12275;product=drug/metabolite exporter YedA;protein_id=WP_001212216.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 187935 188405 . - . ID=gene-AB69_RS12270;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AB69_RS12270;old_locus_tag=AB69_2131 NZ_JHDO01000085.1 Protein Homology CDS 187935 188405 . - 0 ID=cds-WP_000786004.1;Parent=gene-AB69_RS12270;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AB69_RS12270;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 188386 189804 . - . ID=gene-AB69_RS12265;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AB69_RS12265;old_locus_tag=AB69_2132 NZ_JHDO01000085.1 Protein Homology CDS 188386 189804 . - 0 ID=cds-WP_001157246.1;Parent=gene-AB69_RS12265;Dbxref=GenBank:WP_001157246.1;Name=WP_001157246.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AB69_RS12265;product=DNA-cytosine methyltransferase;protein_id=WP_001157246.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 189871 190566 . - . ID=gene-AB69_RS12260;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AB69_RS12260;old_locus_tag=AB69_2133 NZ_JHDO01000085.1 Protein Homology CDS 189871 190566 . - 0 ID=cds-WP_000365556.1;Parent=gene-AB69_RS12260;Dbxref=GenBank:WP_000365556.1;Name=WP_000365556.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310727.1;locus_tag=AB69_RS12260;product=phosphohydrolase;protein_id=WP_000365556.1;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 190606 190887 . - . ID=gene-AB69_RS12255;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AB69_RS12255;old_locus_tag=AB69_2134 NZ_JHDO01000085.1 Protein Homology CDS 190606 190887 . - 0 ID=cds-WP_001373951.1;Parent=gene-AB69_RS12255;Dbxref=GenBank:WP_001373951.1;Name=WP_001373951.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AB69_RS12255;product=cell division protein DrpB;protein_id=WP_001373951.1;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 191536 192596 . + . ID=gene-AB69_RS29355;Name=AB69_RS29355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29355;pseudo=true NZ_JHDO01000085.1 Protein Homology CDS 191536 192596 . + 0 ID=cds-AB69_RS29355;Parent=gene-AB69_RS29355;Note=frameshifted;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824359.1;locus_tag=AB69_RS29355;product=porin;pseudo=true;transl_table=11 NZ_JHDO01000085.1 RefSeq pseudogene 192648 192908 . + . ID=gene-AB69_RS12250;Name=AB69_RS12250;end_range=192908,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS12250;old_locus_tag=AB69_2137;partial=true;pseudo=true NZ_JHDO01000085.1 Protein Homology CDS 192648 192908 . + 0 ID=cds-AB69_RS12250;Parent=gene-AB69_RS12250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=192908,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB69_RS12250;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDO01000085.1 RefSeq gene 192918 193338 . - . ID=gene-AB69_RS27135;Name=AB69_RS27135;end_range=193338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS27135;partial=true NZ_JHDO01000085.1 Protein Homology CDS 192918 193338 . - 1 ID=cds-WP_032235690.1;Parent=gene-AB69_RS27135;Dbxref=GenBank:WP_032235690.1;Name=WP_032235690.1;Ontology_term=GO:0004803;end_range=193338,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AB69_RS27135;partial=true;product=IS30 family transposase;protein_id=WP_032235690.1;transl_table=11 ##sequence-region NZ_JHDO01000086.1 1 35948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000086.1 RefSeq region 1 35948 . + . ID=NZ_JHDO01000086.1:1..35948;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000086.1 RefSeq gene 1 267 . + . ID=gene-AB69_RS12245;Name=AB69_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12245;old_locus_tag=AB69_2138;partial=true;start_range=.,1 NZ_JHDO01000086.1 Protein Homology CDS 1 267 . + 0 ID=cds-WP_000442089.1;Parent=gene-AB69_RS12245;Dbxref=GenBank:WP_000442089.1;Name=WP_000442089.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS12245;partial=true;product=transposase;protein_id=WP_000442089.1;start_range=.,1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 1003 1854 . + . ID=gene-AB69_RS12240;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AB69_RS12240;old_locus_tag=AB69_2139 NZ_JHDO01000086.1 Protein Homology CDS 1003 1854 . + 0 ID=cds-WP_000218212.1;Parent=gene-AB69_RS12240;Dbxref=GenBank:WP_000218212.1;Name=WP_000218212.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AB69_RS12240;product=glyoxalase III HchA;protein_id=WP_000218212.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 1952 3310 . - . ID=gene-AB69_RS12235;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AB69_RS12235;old_locus_tag=AB69_2140 NZ_JHDO01000086.1 Protein Homology CDS 1952 3310 . - 0 ID=cds-WP_000826790.1;Parent=gene-AB69_RS12235;Dbxref=GenBank:WP_000826790.1;Name=WP_000826790.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AB69_RS12235;product=two-component system sensor histidine kinase HprS;protein_id=WP_000826790.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 3310 3981 . - . ID=gene-AB69_RS12230;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AB69_RS12230;old_locus_tag=AB69_2141 NZ_JHDO01000086.1 Protein Homology CDS 3310 3981 . - 0 ID=cds-WP_001339045.1;Parent=gene-AB69_RS12230;Dbxref=GenBank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AB69_RS12230;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 4114 4527 . + . ID=gene-AB69_RS12225;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AB69_RS12225;old_locus_tag=AB69_2142 NZ_JHDO01000086.1 Protein Homology CDS 4114 4527 . + 0 ID=cds-WP_000920120.1;Parent=gene-AB69_RS12225;Dbxref=GenBank:WP_000920120.1;Name=WP_000920120.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416479.1;locus_tag=AB69_RS12225;product=hydroxyisourate hydrolase;protein_id=WP_000920120.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 4636 5640 . + . ID=gene-AB69_RS12220;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AB69_RS12220;old_locus_tag=AB69_2143 NZ_JHDO01000086.1 Protein Homology CDS 4636 5640 . + 0 ID=cds-WP_000740107.1;Parent=gene-AB69_RS12220;Dbxref=GenBank:WP_000740107.1;Name=WP_000740107.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416480.1;locus_tag=AB69_RS12220;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740107.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 5641 6276 . + . ID=gene-AB69_RS12215;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AB69_RS12215;old_locus_tag=AB69_2144 NZ_JHDO01000086.1 Protein Homology CDS 5641 6276 . + 0 ID=cds-WP_001240091.1;Parent=gene-AB69_RS12215;Dbxref=GenBank:WP_001240091.1;Name=WP_001240091.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AB69_RS12215;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240091.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 6533 7183 . + . ID=gene-AB69_RS12210;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AB69_RS12210;old_locus_tag=AB69_2145 NZ_JHDO01000086.1 Protein Homology CDS 6533 7183 . + 0 ID=cds-WP_001007805.1;Parent=gene-AB69_RS12210;Dbxref=GenBank:WP_001007805.1;Name=WP_001007805.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AB69_RS12210;product=metal-binding protein ZinT;protein_id=WP_001007805.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 7526 8056 . + . ID=gene-AB69_RS12205;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AB69_RS12205;old_locus_tag=AB69_2147 NZ_JHDO01000086.1 Protein Homology CDS 7526 8056 . + 0 ID=cds-WP_001079074.1;Parent=gene-AB69_RS12205;Dbxref=GenBank:WP_001079074.1;Name=WP_001079074.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AB69_RS12205;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 8626 8715 . - . ID=gene-AB69_RS12200;Name=AB69_RS12200;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12200;old_locus_tag=AB69_2148 NZ_JHDO01000086.1 tRNAscan-SE tRNA 8626 8715 . - . ID=rna-AB69_RS12200;Parent=gene-AB69_RS12200;anticodon=(pos:complement(8679..8681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12200;product=tRNA-Ser NZ_JHDO01000086.1 tRNAscan-SE exon 8626 8715 . - . ID=exon-AB69_RS12200-1;Parent=rna-AB69_RS12200;anticodon=(pos:complement(8679..8681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12200;product=tRNA-Ser NZ_JHDO01000086.1 RefSeq gene 8809 9606 . + . ID=gene-AB69_RS12195;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AB69_RS12195;old_locus_tag=AB69_2149 NZ_JHDO01000086.1 Protein Homology CDS 8809 9606 . + 0 ID=cds-WP_001301431.1;Parent=gene-AB69_RS12195;Dbxref=GenBank:WP_001301431.1;Name=WP_001301431.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AB69_RS12195;product=DgsA anti-repressor MtfA;protein_id=WP_001301431.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 9707 9782 . + . ID=gene-AB69_RS12190;Name=AB69_RS12190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12190;old_locus_tag=AB69_2150 NZ_JHDO01000086.1 tRNAscan-SE tRNA 9707 9782 . + . ID=rna-AB69_RS12190;Parent=gene-AB69_RS12190;anticodon=(pos:9740..9742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12190;product=tRNA-Asn NZ_JHDO01000086.1 tRNAscan-SE exon 9707 9782 . + . ID=exon-AB69_RS12190-1;Parent=rna-AB69_RS12190;anticodon=(pos:9740..9742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12190;product=tRNA-Asn NZ_JHDO01000086.1 RefSeq gene 10094 10624 . + . ID=gene-AB69_RS30305;Name=AB69_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30305;old_locus_tag=AB69_2151 NZ_JHDO01000086.1 GeneMarkS-2+ CDS 10094 10624 . + 0 ID=cds-WP_001373968.1;Parent=gene-AB69_RS30305;Dbxref=GenBank:WP_001373968.1;Name=WP_001373968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30305;product=LysM domain-containing protein;protein_id=WP_001373968.1;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 10594 11649 . + . ID=gene-AB69_RS30310;Name=AB69_RS30310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30310;pseudo=true NZ_JHDO01000086.1 Protein Homology CDS 10594 11649 . + 0 ID=cds-AB69_RS30310;Parent=gene-AB69_RS30310;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.6;locus_tag=AB69_RS30310;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 11657 18075 . + . ID=gene-AB69_RS30870;Name=AB69_RS30870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30870;pseudo=true NZ_JHDO01000086.1 Protein Homology CDS 11657 18075 . + 0 ID=cds-AB69_RS30870;Parent=gene-AB69_RS30870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556679.1;locus_tag=AB69_RS30870;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 18337 19389 . - . ID=gene-AB69_RS12175;Name=AB69_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12175;old_locus_tag=AB69_2156 NZ_JHDO01000086.1 Protein Homology CDS 18337 19389 . - 0 ID=cds-WP_000480512.1;Parent=gene-AB69_RS12175;Dbxref=GenBank:WP_000480512.1;Name=WP_000480512.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AB69_RS12175;product=glycosyltransferase family 9 protein;protein_id=WP_000480512.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 19704 21020 . + . ID=gene-AB69_RS12170;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AB69_RS12170;old_locus_tag=AB69_2157 NZ_JHDO01000086.1 Protein Homology CDS 19704 21020 . + 0 ID=cds-WP_032231317.1;Parent=gene-AB69_RS12170;Dbxref=GenBank:WP_032231317.1;Name=WP_032231317.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310805.1;locus_tag=AB69_RS12170;product=shikimate transporter;protein_id=WP_032231317.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 21122 22576 . + . ID=gene-AB69_RS12165;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AB69_RS12165;old_locus_tag=AB69_2158 NZ_JHDO01000086.1 Protein Homology CDS 21122 22576 . + 0 ID=cds-WP_001060244.1;Parent=gene-AB69_RS12165;Dbxref=GenBank:WP_001060244.1;Name=WP_001060244.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AB69_RS12165;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 22919 23635 . + . ID=gene-AB69_RS12160;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AB69_RS12160;old_locus_tag=AB69_2159 NZ_JHDO01000086.1 Protein Homology CDS 22919 23635 . + 0 ID=cds-WP_000532923.1;Parent=gene-AB69_RS12160;Dbxref=GenBank:WP_000532923.1;Name=WP_000532923.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=AB69_RS12160;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532923.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 24086 24161 . - . ID=gene-AB69_RS12155;Name=AB69_RS12155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12155;old_locus_tag=AB69_2160 NZ_JHDO01000086.1 tRNAscan-SE tRNA 24086 24161 . - . ID=rna-AB69_RS12155;Parent=gene-AB69_RS12155;anticodon=(pos:complement(24126..24128));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12155;product=tRNA-Asn NZ_JHDO01000086.1 tRNAscan-SE exon 24086 24161 . - . ID=exon-AB69_RS12155-1;Parent=rna-AB69_RS12155;anticodon=(pos:complement(24126..24128));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12155;product=tRNA-Asn NZ_JHDO01000086.1 RefSeq gene 24262 25749 . - . ID=gene-AB69_RS12150;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AB69_RS12150;old_locus_tag=AB69_2161 NZ_JHDO01000086.1 Protein Homology CDS 24262 25749 . - 0 ID=cds-WP_001312931.1;Parent=gene-AB69_RS12150;Dbxref=GenBank:WP_001312931.1;Name=WP_001312931.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AB69_RS12150;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_001312931.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 25910 25985 . + . ID=gene-AB69_RS12145;Name=AB69_RS12145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12145;old_locus_tag=AB69_2162 NZ_JHDO01000086.1 tRNAscan-SE tRNA 25910 25985 . + . ID=rna-AB69_RS12145;Parent=gene-AB69_RS12145;anticodon=(pos:25943..25945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12145;product=tRNA-Asn NZ_JHDO01000086.1 tRNAscan-SE exon 25910 25985 . + . ID=exon-AB69_RS12145-1;Parent=rna-AB69_RS12145;anticodon=(pos:25943..25945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12145;product=tRNA-Asn NZ_JHDO01000086.1 RefSeq gene 26023 26973 . - . ID=gene-AB69_RS12140;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AB69_RS12140;old_locus_tag=AB69_2163 NZ_JHDO01000086.1 Protein Homology CDS 26023 26973 . - 0 ID=cds-WP_001011039.1;Parent=gene-AB69_RS12140;Dbxref=GenBank:WP_001011039.1;Name=WP_001011039.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310810.1;locus_tag=AB69_RS12140;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011039.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 27075 27992 . - . ID=gene-AB69_RS12135;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AB69_RS12135;old_locus_tag=AB69_2164 NZ_JHDO01000086.1 Protein Homology CDS 27075 27992 . - 0 ID=cds-WP_001011482.1;Parent=gene-AB69_RS12135;Dbxref=GenBank:WP_001011482.1;Name=WP_001011482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AB69_RS12135;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011482.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 28319 28394 . + . ID=gene-AB69_RS12130;Name=AB69_RS12130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS12130;old_locus_tag=AB69_2165 NZ_JHDO01000086.1 tRNAscan-SE tRNA 28319 28394 . + . ID=rna-AB69_RS12130;Parent=gene-AB69_RS12130;anticodon=(pos:28352..28354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12130;product=tRNA-Asn NZ_JHDO01000086.1 tRNAscan-SE exon 28319 28394 . + . ID=exon-AB69_RS12130-1;Parent=rna-AB69_RS12130;anticodon=(pos:28352..28354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS12130;product=tRNA-Asn NZ_JHDO01000086.1 RefSeq gene 28451 29386 . - . ID=gene-AB69_RS12125;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AB69_RS12125;old_locus_tag=AB69_2166 NZ_JHDO01000086.1 Protein Homology CDS 28451 29386 . - 0 ID=cds-WP_000986347.1;Parent=gene-AB69_RS12125;Dbxref=GenBank:WP_000986347.1;Name=WP_000986347.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707892.1;locus_tag=AB69_RS12125;product=L%2CD-transpeptidase;protein_id=WP_000986347.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 29448 30527 . - . ID=gene-AB69_RS12120;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AB69_RS12120;old_locus_tag=AB69_2167 NZ_JHDO01000086.1 Protein Homology CDS 29448 30527 . - 0 ID=cds-WP_001166157.1;Parent=gene-AB69_RS12120;Dbxref=GenBank:WP_001166157.1;Name=WP_001166157.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416495.1;locus_tag=AB69_RS12120;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001166157.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 30539 31282 . - . ID=gene-AB69_RS12115;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AB69_RS12115;old_locus_tag=AB69_2168 NZ_JHDO01000086.1 Protein Homology CDS 30539 31282 . - 0 ID=cds-WP_001326708.1;Parent=gene-AB69_RS12115;Dbxref=GenBank:WP_001326708.1;Name=WP_001326708.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416496.1;locus_tag=AB69_RS12115;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001326708.1;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 31279 31824 . - . ID=gene-AB69_RS12110;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AB69_RS12110;old_locus_tag=AB69_2169 NZ_JHDO01000086.1 Protein Homology CDS 31279 31824 . - 0 ID=cds-WP_000973176.1;Parent=gene-AB69_RS12110;Dbxref=GenBank:WP_000973176.1;Name=WP_000973176.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AB69_RS12110;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973176.1;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 31976 32119 . - . ID=gene-AB69_RS30340;Name=AB69_RS30340;end_range=32119,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30340;old_locus_tag=AB69_2170;partial=true;pseudo=true NZ_JHDO01000086.1 Protein Homology CDS 31976 32119 . - 0 ID=cds-AB69_RS30340;Parent=gene-AB69_RS30340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AB69_RS30340;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 32128 32316 . - . ID=gene-AB69_RS30345;Name=AB69_RS30345;end_range=32316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30345;partial=true;pseudo=true;start_range=.,32128 NZ_JHDO01000086.1 Protein Homology CDS 32128 32316 . - 0 ID=cds-AB69_RS30345;Parent=gene-AB69_RS30345;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=32316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AB69_RS30345;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,32128;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 32289 32453 . - . ID=gene-AB69_RS12100;Name=AB69_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12100;old_locus_tag=AB69_2171 NZ_JHDO01000086.1 GeneMarkS-2+ CDS 32289 32453 . - 0 ID=cds-WP_001128468.1;Parent=gene-AB69_RS12100;Dbxref=GenBank:WP_001128468.1;Name=WP_001128468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS12100;product=hypothetical protein;protein_id=WP_001128468.1;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 33341 33679 . + . ID=gene-AB69_RS28730;Name=AB69_RS28730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28730;partial=true;pseudo=true;start_range=.,33341 NZ_JHDO01000086.1 Protein Homology CDS 33341 33679 . + 0 ID=cds-AB69_RS28730;Parent=gene-AB69_RS28730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AB69_RS28730;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,33341;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 33875 35089 . + . ID=gene-AB69_RS12090;Name=AB69_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12090;old_locus_tag=AB69_2173 NZ_JHDO01000086.1 Protein Homology CDS 33875 35089 . + 0 ID=cds-WP_032231319.1;Parent=gene-AB69_RS12090;Dbxref=GenBank:WP_032231319.1;Name=WP_032231319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=AB69_RS12090;product=PfkB family carbohydrate kinase;protein_id=WP_032231319.1;transl_table=11 NZ_JHDO01000086.1 RefSeq pseudogene 35103 35597 . + . ID=gene-AB69_RS12085;Name=AB69_RS12085;end_range=35597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS12085;old_locus_tag=AB69_2174;partial=true;pseudo=true NZ_JHDO01000086.1 Protein Homology CDS 35103 35597 . + 0 ID=cds-AB69_RS12085;Parent=gene-AB69_RS12085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=35597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=AB69_RS12085;partial=true;product=glutamine amidotransferase;pseudo=true;transl_table=11 NZ_JHDO01000086.1 RefSeq gene 35689 35948 . + . ID=gene-AB69_RS12080;Name=AB69_RS12080;end_range=35948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12080;old_locus_tag=AB69_2175;partial=true NZ_JHDO01000086.1 Protein Homology CDS 35689 35948 . + 0 ID=cds-WP_000567716.1;Parent=gene-AB69_RS12080;Dbxref=GenBank:WP_000567716.1;Name=WP_000567716.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=35948,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS12080;partial=true;product=transposase;protein_id=WP_000567716.1;transl_table=11 ##sequence-region NZ_JHDO01000087.1 1 310282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000087.1 RefSeq region 1 310282 . + . ID=NZ_JHDO01000087.1:1..310282;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000087.1 RefSeq gene 1 316 . + . ID=gene-AB69_RS12075;Name=AB69_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS12075;old_locus_tag=AB69_2176;partial=true;start_range=.,1 NZ_JHDO01000087.1 Protein Homology CDS 1 316 . + 1 ID=cds-WP_032235691.1;Parent=gene-AB69_RS12075;Dbxref=GenBank:WP_032235691.1;Name=WP_032235691.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS12075;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235691.1;start_range=.,1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 339 596 . + . ID=gene-AB69_RS27180;Name=AB69_RS27180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27180;old_locus_tag=AB69_2177;partial=true;pseudo=true;start_range=.,339 NZ_JHDO01000087.1 Protein Homology CDS 339 596 . + 0 ID=cds-AB69_RS27180;Parent=gene-AB69_RS27180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=AB69_RS27180;partial=true;product=glutamine amidotransferase;pseudo=true;start_range=.,339;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 644 1609 . + . ID=gene-AB69_RS30350;Name=AB69_RS30350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30350;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 644 1609 . + 0 ID=cds-AB69_RS30350;Parent=gene-AB69_RS30350;Note=internal stop;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560587.1;locus_tag=AB69_RS30350;product=DMT family transporter;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 1660 2022 . + . ID=gene-AB69_RS12070;Name=cbtA;gbkey=Gene;gene=cbtA;gene_biotype=protein_coding;locus_tag=AB69_RS12070;old_locus_tag=AB69_2180 NZ_JHDO01000087.1 Protein Homology CDS 1660 2022 . + 0 ID=cds-WP_032231352.1;Parent=gene-AB69_RS12070;Dbxref=GenBank:WP_032231352.1;Name=WP_032231352.1;gbkey=CDS;gene=cbtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854828.1;locus_tag=AB69_RS12070;product=type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA;protein_id=WP_032231352.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 2019 2213 . + . ID=gene-AB69_RS12065;Name=yeeW;gbkey=Gene;gene=yeeW;gene_biotype=protein_coding;locus_tag=AB69_RS12065;old_locus_tag=AB69_2181 NZ_JHDO01000087.1 Protein Homology CDS 2019 2213 . + 0 ID=cds-WP_000988600.1;Parent=gene-AB69_RS12065;Dbxref=GenBank:WP_000988600.1;Name=WP_000988600.1;gbkey=CDS;gene=yeeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310834.2;locus_tag=AB69_RS12065;product=DUF5983 family protein;protein_id=WP_000988600.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 2247 2339 . + . ID=gene-AB69_RS29370;Name=AB69_RS29370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29370;old_locus_tag=AB69_2182;partial=true;pseudo=true;start_range=.,2247 NZ_JHDO01000087.1 Protein Homology CDS 2247 2339 . + 0 ID=cds-AB69_RS29370;Parent=gene-AB69_RS29370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AB69_RS29370;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,2247;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 2628 2765 . - . ID=gene-AB69_RS0124570;Name=AB69_RS0124570;end_range=2765,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124570;partial=true;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 2628 2765 . - 0 ID=cds-AB69_RS0124570;Parent=gene-AB69_RS0124570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AB69_RS0124570;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 2828 3010 . + . ID=gene-AB69_RS0124575;Name=AB69_RS0124575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124575 NZ_JHDO01000087.1 Protein Homology CDS 2828 3010 . + 0 ID=cds-WP_001016348.1;Parent=gene-AB69_RS0124575;Dbxref=GenBank:WP_001016348.1;Name=WP_001016348.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296208.1;locus_tag=AB69_RS0124575;product=EutP/PduV family microcompartment system protein;protein_id=WP_001016348.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 3111 3440 . - . ID=gene-AB69_RS12055;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AB69_RS12055;old_locus_tag=AB69_2183 NZ_JHDO01000087.1 Protein Homology CDS 3111 3440 . - 0 ID=cds-WP_000450409.1;Parent=gene-AB69_RS12055;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AB69_RS12055;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 3612 4670 . - . ID=gene-AB69_RS12050;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AB69_RS12050;old_locus_tag=AB69_2185 NZ_JHDO01000087.1 Protein Homology CDS 3612 4670 . - 0 ID=cds-WP_001200905.1;Parent=gene-AB69_RS12050;Dbxref=GenBank:WP_001200905.1;Name=WP_001200905.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AB69_RS12050;product=FUSC family protein;protein_id=WP_001200905.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 4868 5341 . - . ID=gene-AB69_RS12045;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AB69_RS12045;old_locus_tag=AB69_2186 NZ_JHDO01000087.1 Protein Homology CDS 4868 5341 . - 0 ID=cds-WP_001105393.1;Parent=gene-AB69_RS12045;Dbxref=GenBank:WP_001105393.1;Name=WP_001105393.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AB69_RS12045;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105393.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 5460 6626 . - . ID=gene-AB69_RS12040;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AB69_RS12040;old_locus_tag=AB69_2187 NZ_JHDO01000087.1 Protein Homology CDS 5460 6626 . - 0 ID=cds-WP_001310935.1;Parent=gene-AB69_RS12040;Dbxref=GenBank:WP_001310935.1;Name=WP_001310935.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AB69_RS12040;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_001310935.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 6835 8262 . + . ID=gene-AB69_RS12035;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AB69_RS12035;old_locus_tag=AB69_2189 NZ_JHDO01000087.1 Protein Homology CDS 6835 8262 . + 0 ID=cds-WP_000980567.1;Parent=gene-AB69_RS12035;Dbxref=GenBank:WP_000980567.1;Name=WP_000980567.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310840.1;locus_tag=AB69_RS12035;product=exodeoxyribonuclease I;protein_id=WP_000980567.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 8305 8532 . - . ID=gene-AB69_RS12030;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AB69_RS12030;old_locus_tag=AB69_2190 NZ_JHDO01000087.1 Protein Homology CDS 8305 8532 . - 0 ID=cds-WP_000985273.1;Parent=gene-AB69_RS12030;Dbxref=GenBank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AB69_RS12030;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 8546 9604 . - . ID=gene-AB69_RS12025;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AB69_RS12025;old_locus_tag=AB69_2191 NZ_JHDO01000087.1 Protein Homology CDS 8546 9604 . - 0 ID=cds-WP_000492321.1;Parent=gene-AB69_RS12025;Dbxref=GenBank:WP_000492321.1;Name=WP_000492321.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AB69_RS12025;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_000492321.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 9783 11141 . - . ID=gene-AB69_RS12020;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AB69_RS12020;old_locus_tag=AB69_2192 NZ_JHDO01000087.1 Protein Homology CDS 9783 11141 . - 0 ID=cds-WP_000019197.1;Parent=gene-AB69_RS12020;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AB69_RS12020;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 11131 11193 . - . ID=gene-AB69_RS29375;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AB69_RS29375 NZ_JHDO01000087.1 Protein Homology CDS 11131 11193 . - 0 ID=cds-WP_010723108.1;Parent=gene-AB69_RS29375;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AB69_RS29375;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 11408 12337 . - . ID=gene-AB69_RS12015;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AB69_RS12015;old_locus_tag=AB69_2193 NZ_JHDO01000087.1 Protein Homology CDS 11408 12337 . - 0 ID=cds-WP_000803351.1;Parent=gene-AB69_RS12015;Dbxref=GenBank:WP_000803351.1;Name=WP_000803351.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AB69_RS12015;product=LysR substrate-binding domain-containing protein;protein_id=WP_000803351.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 12383 13207 . - . ID=gene-AB69_RS12010;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AB69_RS12010;old_locus_tag=AB69_2194 NZ_JHDO01000087.1 Protein Homology CDS 12383 13207 . - 0 ID=cds-WP_032231324.1;Parent=gene-AB69_RS12010;Dbxref=GenBank:WP_032231324.1;Name=WP_032231324.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AB69_RS12010;product=SDR family oxidoreductase;protein_id=WP_032231324.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 13290 13544 . - . ID=gene-AB69_RS12005;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AB69_RS12005;old_locus_tag=AB69_2195 NZ_JHDO01000087.1 Protein Homology CDS 13290 13544 . - 0 ID=cds-WP_000767829.1;Parent=gene-AB69_RS12005;Dbxref=GenBank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AB69_RS12005;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 13541 13792 . - . ID=gene-AB69_RS12000;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AB69_RS12000;old_locus_tag=AB69_2196 NZ_JHDO01000087.1 Protein Homology CDS 13541 13792 . - 0 ID=cds-WP_001259255.1;Parent=gene-AB69_RS12000;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AB69_RS12000;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 14075 14125 . + . ID=gene-AB69_RS27185;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AB69_RS27185 NZ_JHDO01000087.1 Protein Homology CDS 14075 14125 . + 0 ID=cds-WP_001364200.1;Parent=gene-AB69_RS27185;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AB69_RS27185;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JHDO01000087.1 cmsearch sequence_feature 14101 14224 . + . ID=id-NZ_JHDO01000087.1:14101..14224;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000087.1 RefSeq gene 14271 15170 . + . ID=gene-AB69_RS11995;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AB69_RS11995;old_locus_tag=AB69_2197 NZ_JHDO01000087.1 Protein Homology CDS 14271 15170 . + 0 ID=cds-WP_000131777.1;Parent=gene-AB69_RS11995;Dbxref=GenBank:WP_000131777.1;Name=WP_000131777.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AB69_RS11995;product=ATP phosphoribosyltransferase;protein_id=WP_000131777.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 15176 16480 . + . ID=gene-AB69_RS11990;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AB69_RS11990;old_locus_tag=AB69_2198 NZ_JHDO01000087.1 Protein Homology CDS 15176 16480 . + 0 ID=cds-WP_001614652.1;Parent=gene-AB69_RS11990;Dbxref=GenBank:WP_001614652.1;Name=WP_001614652.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=AB69_RS11990;product=histidinol dehydrogenase;protein_id=WP_001614652.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 16477 17547 . + . ID=gene-AB69_RS11985;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AB69_RS11985;old_locus_tag=AB69_2199 NZ_JHDO01000087.1 Protein Homology CDS 16477 17547 . + 0 ID=cds-WP_000108961.1;Parent=gene-AB69_RS11985;Dbxref=GenBank:WP_000108961.1;Name=WP_000108961.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310849.1;locus_tag=AB69_RS11985;product=histidinol-phosphate transaminase;protein_id=WP_000108961.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 17547 18614 . + . ID=gene-AB69_RS11980;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AB69_RS11980;old_locus_tag=AB69_2200 NZ_JHDO01000087.1 Protein Homology CDS 17547 18614 . + 0 ID=cds-WP_000080066.1;Parent=gene-AB69_RS11980;Dbxref=GenBank:WP_000080066.1;Name=WP_000080066.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AB69_RS11980;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080066.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 18614 19204 . + . ID=gene-AB69_RS11975;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AB69_RS11975;old_locus_tag=AB69_2201 NZ_JHDO01000087.1 Protein Homology CDS 18614 19204 . + 0 ID=cds-WP_001103560.1;Parent=gene-AB69_RS11975;Dbxref=GenBank:WP_001103560.1;Name=WP_001103560.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AB69_RS11975;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 19204 19941 . + . ID=gene-AB69_RS11970;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AB69_RS11970;old_locus_tag=AB69_2202 NZ_JHDO01000087.1 Protein Homology CDS 19204 19941 . + 0 ID=cds-WP_000586475.1;Parent=gene-AB69_RS11970;Dbxref=GenBank:WP_000586475.1;Name=WP_000586475.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AB69_RS11970;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586475.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 19923 20699 . + . ID=gene-AB69_RS11965;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AB69_RS11965;old_locus_tag=AB69_2203 NZ_JHDO01000087.1 Protein Homology CDS 19923 20699 . + 0 ID=cds-WP_000880185.1;Parent=gene-AB69_RS11965;Dbxref=GenBank:WP_000880185.1;Name=WP_000880185.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AB69_RS11965;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880185.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 20693 21304 . + . ID=gene-AB69_RS11960;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AB69_RS11960;old_locus_tag=AB69_2204 NZ_JHDO01000087.1 Protein Homology CDS 20693 21304 . + 0 ID=cds-WP_000954837.1;Parent=gene-AB69_RS11960;Dbxref=GenBank:WP_000954837.1;Name=WP_000954837.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AB69_RS11960;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954837.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 21490 22467 . - . ID=gene-AB69_RS11955;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AB69_RS11955;old_locus_tag=AB69_2205 NZ_JHDO01000087.1 Protein Homology CDS 21490 22467 . - 0 ID=cds-WP_001614654.1;Parent=gene-AB69_RS11955;Dbxref=GenBank:WP_001614654.1;Name=WP_001614654.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AB69_RS11955;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_001614654.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 22614 22706 . - . ID=gene-AB69_RS30875;Name=AB69_RS30875;end_range=22706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30875;partial=true;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 22614 22706 . - 0 ID=cds-AB69_RS30875;Parent=gene-AB69_RS30875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416532.1;locus_tag=AB69_RS30875;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 22876 23880 . + . ID=gene-AB69_RS11950;Name=AB69_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11950;old_locus_tag=AB69_2206 NZ_JHDO01000087.1 Protein Homology CDS 22876 23880 . + 0 ID=cds-WP_023154852.1;Parent=gene-AB69_RS11950;Dbxref=GenBank:WP_023154852.1;Name=WP_023154852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432020.1;locus_tag=AB69_RS11950;product=NAD-dependent epimerase;protein_id=WP_023154852.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 23946 25112 . - . ID=gene-AB69_RS11945;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AB69_RS11945;old_locus_tag=AB69_2207 NZ_JHDO01000087.1 Protein Homology CDS 23946 25112 . - 0 ID=cds-WP_000704794.1;Parent=gene-AB69_RS11945;Dbxref=GenBank:WP_000704794.1;Name=WP_000704794.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=AB69_RS11945;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704794.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 25361 26767 . - . ID=gene-AB69_RS11940;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AB69_RS11940;old_locus_tag=AB69_2208 NZ_JHDO01000087.1 Protein Homology CDS 25361 26767 . - 0 ID=cds-WP_000043432.1;Parent=gene-AB69_RS11940;Dbxref=GenBank:WP_000043432.1;Name=WP_000043432.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AB69_RS11940;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043432.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 26964 28388 . - . ID=gene-AB69_RS11935;Name=AB69_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11935;old_locus_tag=AB69_2209 NZ_JHDO01000087.1 Protein Homology CDS 26964 28388 . - 0 ID=cds-WP_000935731.1;Parent=gene-AB69_RS11935;Dbxref=GenBank:WP_000935731.1;Name=WP_000935731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610395.1;locus_tag=AB69_RS11935;product=phosphomannomutase;protein_id=WP_000935731.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 28394 29140 . - . ID=gene-AB69_RS11930;Name=AB69_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11930;old_locus_tag=AB69_2210 NZ_JHDO01000087.1 Protein Homology CDS 28394 29140 . - 0 ID=cds-WP_001222848.1;Parent=gene-AB69_RS11930;Dbxref=GenBank:WP_001222848.1;Name=WP_001222848.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222848.1;locus_tag=AB69_RS11930;product=glycosyltransferase family 2 protein;protein_id=WP_001222848.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 29140 30546 . - . ID=gene-AB69_RS11925;Name=AB69_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11925;old_locus_tag=AB69_2211 NZ_JHDO01000087.1 Protein Homology CDS 29140 30546 . - 0 ID=cds-WP_000926412.1;Parent=gene-AB69_RS11925;Dbxref=GenBank:WP_000926412.1;Name=WP_000926412.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610403.1;locus_tag=AB69_RS11925;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000926412.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 30552 31013 . - . ID=gene-AB69_RS0124580;Name=AB69_RS0124580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124580 NZ_JHDO01000087.1 Protein Homology CDS 30552 31013 . - 0 ID=cds-WP_001042470.1;Parent=gene-AB69_RS0124580;Dbxref=GenBank:WP_001042470.1;Name=WP_001042470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042470.1;locus_tag=AB69_RS0124580;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001042470.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 31016 31981 . - . ID=gene-AB69_RS11920;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AB69_RS11920;old_locus_tag=AB69_2212 NZ_JHDO01000087.1 Protein Homology CDS 31016 31981 . - 0 ID=cds-WP_000163137.1;Parent=gene-AB69_RS11920;Dbxref=GenBank:WP_000163137.1;Name=WP_000163137.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176306.1;locus_tag=AB69_RS11920;product=GDP-L-fucose synthase;protein_id=WP_000163137.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 31985 33103 . - . ID=gene-AB69_RS11915;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AB69_RS11915;old_locus_tag=AB69_2213 NZ_JHDO01000087.1 Protein Homology CDS 31985 33103 . - 0 ID=cds-WP_000708864.1;Parent=gene-AB69_RS11915;Dbxref=GenBank:WP_000708864.1;Name=WP_000708864.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709507.1;locus_tag=AB69_RS11915;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000708864.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 33100 34245 . - . ID=gene-AB69_RS11910;Name=AB69_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11910;old_locus_tag=AB69_2214 NZ_JHDO01000087.1 Protein Homology CDS 33100 34245 . - 0 ID=cds-WP_000335139.1;Parent=gene-AB69_RS11910;Dbxref=GenBank:WP_000335139.1;Name=WP_000335139.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335139.1;locus_tag=AB69_RS11910;product=glycosyltransferase family 4 protein;protein_id=WP_000335139.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 34238 35252 . - . ID=gene-AB69_RS11905;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=pseudogene;locus_tag=AB69_RS11905;old_locus_tag=AB69_2215;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 34238 35252 . - 0 ID=cds-AB69_RS11905;Parent=gene-AB69_RS11905;Note=frameshifted;gbkey=CDS;gene=wzy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_158642096.1;locus_tag=AB69_RS11905;product=O159 family O-antigen polymerase;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 35239 36075 . - . ID=gene-AB69_RS11900;Name=AB69_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11900;old_locus_tag=AB69_2216 NZ_JHDO01000087.1 Protein Homology CDS 35239 36075 . - 0 ID=cds-WP_000478526.1;Parent=gene-AB69_RS11900;Dbxref=GenBank:WP_000478526.1;Name=WP_000478526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478526.1;locus_tag=AB69_RS11900;product=hypothetical protein;protein_id=WP_000478526.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 36047 36784 . - . ID=gene-AB69_RS11895;Name=AB69_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11895;old_locus_tag=AB69_2217 NZ_JHDO01000087.1 Protein Homology CDS 36047 36784 . - 0 ID=cds-WP_000779473.1;Parent=gene-AB69_RS11895;Dbxref=GenBank:WP_000779473.1;Name=WP_000779473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779473.1;locus_tag=AB69_RS11895;product=glycosyltransferase;protein_id=WP_000779473.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 36781 38097 . - . ID=gene-AB69_RS11890;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;locus_tag=AB69_RS11890;old_locus_tag=AB69_2218 NZ_JHDO01000087.1 Protein Homology CDS 36781 38097 . - 0 ID=cds-WP_001614658.1;Parent=gene-AB69_RS11890;Dbxref=GenBank:WP_001614658.1;Name=WP_001614658.1;gbkey=CDS;gene=wzx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614658.1;locus_tag=AB69_RS11890;product=O159 family O-antigen flippase;protein_id=WP_001614658.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 38416 39309 . - . ID=gene-AB69_RS11885;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AB69_RS11885;old_locus_tag=AB69_2219 NZ_JHDO01000087.1 Protein Homology CDS 38416 39309 . - 0 ID=cds-WP_032231326.1;Parent=gene-AB69_RS11885;Dbxref=GenBank:WP_032231326.1;Name=WP_032231326.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AB69_RS11885;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_032231326.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 39484 40878 . - . ID=gene-AB69_RS11880;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AB69_RS11880;old_locus_tag=AB69_2220 NZ_JHDO01000087.1 Protein Homology CDS 39484 40878 . - 0 ID=cds-WP_001614659.1;Parent=gene-AB69_RS11880;Dbxref=GenBank:WP_001614659.1;Name=WP_001614659.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416547.1;locus_tag=AB69_RS11880;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001614659.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 40889 42109 . - . ID=gene-AB69_RS11875;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AB69_RS11875;old_locus_tag=AB69_2221 NZ_JHDO01000087.1 Protein Homology CDS 40889 42109 . - 0 ID=cds-WP_032231328.1;Parent=gene-AB69_RS11875;Dbxref=GenBank:WP_032231328.1;Name=WP_032231328.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AB69_RS11875;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_032231328.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 42106 43386 . - . ID=gene-AB69_RS11870;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AB69_RS11870;old_locus_tag=AB69_2222 NZ_JHDO01000087.1 Protein Homology CDS 42106 43386 . - 0 ID=cds-WP_000770805.1;Parent=gene-AB69_RS11870;Dbxref=GenBank:WP_000770805.1;Name=WP_000770805.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AB69_RS11870;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770805.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 43662 45140 . - . ID=gene-AB69_RS11865;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AB69_RS11865;old_locus_tag=AB69_2223 NZ_JHDO01000087.1 Protein Homology CDS 43662 45140 . - 0 ID=cds-WP_000058436.1;Parent=gene-AB69_RS11865;Dbxref=GenBank:WP_000058436.1;Name=WP_000058436.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AB69_RS11865;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058436.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 45142 46536 . - . ID=gene-AB69_RS11860;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AB69_RS11860;old_locus_tag=AB69_2224 NZ_JHDO01000087.1 Protein Homology CDS 45142 46536 . - 0 ID=cds-WP_032231330.1;Parent=gene-AB69_RS11860;Dbxref=GenBank:WP_032231330.1;Name=WP_032231330.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=AB69_RS11860;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_032231330.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 46591 47961 . - . ID=gene-AB69_RS11855;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AB69_RS11855;old_locus_tag=AB69_2225 NZ_JHDO01000087.1 Protein Homology CDS 46591 47961 . - 0 ID=cds-WP_001355594.1;Parent=gene-AB69_RS11855;Dbxref=GenBank:WP_001355594.1;Name=WP_001355594.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=AB69_RS11855;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_001355594.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 48330 49766 . - . ID=gene-AB69_RS11850;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AB69_RS11850;old_locus_tag=AB69_2227 NZ_JHDO01000087.1 Protein Homology CDS 48330 49766 . - 0 ID=cds-WP_000079280.1;Parent=gene-AB69_RS11850;Dbxref=GenBank:WP_000079280.1;Name=WP_000079280.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AB69_RS11850;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079280.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 49769 50992 . - . ID=gene-AB69_RS11845;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AB69_RS11845;old_locus_tag=AB69_2228 NZ_JHDO01000087.1 Protein Homology CDS 49769 50992 . - 0 ID=cds-WP_000699721.1;Parent=gene-AB69_RS11845;Dbxref=GenBank:WP_000699721.1;Name=WP_000699721.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AB69_RS11845;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699721.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 50989 51468 . - . ID=gene-AB69_RS11840;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=AB69_RS11840;old_locus_tag=AB69_2229 NZ_JHDO01000087.1 Protein Homology CDS 50989 51468 . - 0 ID=cds-WP_001298845.1;Parent=gene-AB69_RS11840;Dbxref=GenBank:WP_001298845.1;Name=WP_001298845.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AB69_RS11840;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001298845.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 51471 52436 . - . ID=gene-AB69_RS11835;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AB69_RS11835;old_locus_tag=AB69_2230 NZ_JHDO01000087.1 Protein Homology CDS 51471 52436 . - 0 ID=cds-WP_032231331.1;Parent=gene-AB69_RS11835;Dbxref=GenBank:WP_032231331.1;Name=WP_032231331.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=AB69_RS11835;product=GDP-L-fucose synthase;protein_id=WP_032231331.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 52439 53560 . - . ID=gene-AB69_RS11830;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AB69_RS11830;old_locus_tag=AB69_2231 NZ_JHDO01000087.1 Protein Homology CDS 52439 53560 . - 0 ID=cds-WP_000048190.1;Parent=gene-AB69_RS11830;Dbxref=GenBank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AB69_RS11830;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 53587 54135 . - . ID=gene-AB69_RS11825;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AB69_RS11825;old_locus_tag=AB69_2232 NZ_JHDO01000087.1 Protein Homology CDS 53587 54135 . - 0 ID=cds-WP_001153551.1;Parent=gene-AB69_RS11825;Dbxref=GenBank:WP_001153551.1;Name=WP_001153551.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AB69_RS11825;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153551.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 54151 54897 . - . ID=gene-AB69_RS11820;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AB69_RS11820;old_locus_tag=AB69_2233 NZ_JHDO01000087.1 Protein Homology CDS 54151 54897 . - 0 ID=cds-WP_000927041.1;Parent=gene-AB69_RS11820;Dbxref=GenBank:WP_000927041.1;Name=WP_000927041.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310887.1;locus_tag=AB69_RS11820;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927041.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 54908 56125 . - . ID=gene-AB69_RS11815;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AB69_RS11815;old_locus_tag=AB69_2234 NZ_JHDO01000087.1 Protein Homology CDS 54908 56125 . - 0 ID=cds-WP_000107784.1;Parent=gene-AB69_RS11815;Dbxref=GenBank:WP_000107784.1;Name=WP_000107784.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AB69_RS11815;product=colanic acid polymerase WcaD;protein_id=WP_000107784.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 56100 57317 . - . ID=gene-AB69_RS11810;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AB69_RS11810;old_locus_tag=AB69_2235 NZ_JHDO01000087.1 Protein Homology CDS 56100 57317 . - 0 ID=cds-WP_001023923.1;Parent=gene-AB69_RS11810;Dbxref=GenBank:WP_001023923.1;Name=WP_001023923.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707952.1;locus_tag=AB69_RS11810;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023923.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 57314 57802 . - . ID=gene-AB69_RS11805;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AB69_RS11805;old_locus_tag=AB69_2236 NZ_JHDO01000087.1 Protein Homology CDS 57314 57802 . - 0 ID=cds-WP_000888740.1;Parent=gene-AB69_RS11805;Dbxref=GenBank:WP_000888740.1;Name=WP_000888740.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AB69_RS11805;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888740.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 57805 58644 . - . ID=gene-AB69_RS11800;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AB69_RS11800;old_locus_tag=AB69_2237 NZ_JHDO01000087.1 Protein Homology CDS 57805 58644 . - 0 ID=cds-WP_000654503.1;Parent=gene-AB69_RS11800;Dbxref=GenBank:WP_000654503.1;Name=WP_000654503.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AB69_RS11800;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654503.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 58822 60984 . - . ID=gene-AB69_RS11795;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AB69_RS11795;old_locus_tag=AB69_2238 NZ_JHDO01000087.1 Protein Homology CDS 58822 60984 . - 0 ID=cds-WP_000137086.1;Parent=gene-AB69_RS11795;Dbxref=GenBank:WP_000137086.1;Name=WP_000137086.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310892.2;locus_tag=AB69_RS11795;product=tyrosine-protein kinase Wzc;protein_id=WP_000137086.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 60987 61430 . - . ID=gene-AB69_RS11790;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AB69_RS11790;old_locus_tag=AB69_2239 NZ_JHDO01000087.1 Protein Homology CDS 60987 61430 . - 0 ID=cds-WP_000482901.1;Parent=gene-AB69_RS11790;Dbxref=GenBank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AB69_RS11790;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 61436 62575 . - . ID=gene-AB69_RS11785;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AB69_RS11785;old_locus_tag=AB69_2240 NZ_JHDO01000087.1 Protein Homology CDS 61436 62575 . - 0 ID=cds-WP_000978094.1;Parent=gene-AB69_RS11785;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AB69_RS11785;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 62884 63033 . + . ID=gene-AB69_RS30015;Name=AB69_RS30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30015 NZ_JHDO01000087.1 GeneMarkS-2+ CDS 62884 63033 . + 0 ID=cds-WP_162829205.1;Parent=gene-AB69_RS30015;Dbxref=GenBank:WP_162829205.1;Name=WP_162829205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30015;product=hypothetical protein;protein_id=WP_162829205.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 63234 64817 . + . ID=gene-AB69_RS11780;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AB69_RS11780;old_locus_tag=AB69_2241 NZ_JHDO01000087.1 Protein Homology CDS 63234 64817 . + 0 ID=cds-WP_001300971.1;Parent=gene-AB69_RS11780;Dbxref=GenBank:WP_001300971.1;Name=WP_001300971.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=AB69_RS11780;product=TerC family protein;protein_id=WP_001300971.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 65091 66944 . - . ID=gene-AB69_RS11775;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AB69_RS11775;old_locus_tag=AB69_2242 NZ_JHDO01000087.1 Protein Homology CDS 65091 66944 . - 0 ID=cds-WP_001252321.1;Parent=gene-AB69_RS11775;Dbxref=GenBank:WP_001252321.1;Name=WP_001252321.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AB69_RS11775;product=outer membrane assembly protein AsmA;protein_id=WP_001252321.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 66966 67547 . - . ID=gene-AB69_RS11770;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AB69_RS11770;old_locus_tag=AB69_2243 NZ_JHDO01000087.1 Protein Homology CDS 66966 67547 . - 0 ID=cds-WP_001234767.1;Parent=gene-AB69_RS11770;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AB69_RS11770;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 67639 68280 . - . ID=gene-AB69_RS11765;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AB69_RS11765;old_locus_tag=AB69_2244 NZ_JHDO01000087.1 Protein Homology CDS 67639 68280 . - 0 ID=cds-WP_001295424.1;Parent=gene-AB69_RS11765;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AB69_RS11765;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 68598 71915 . + . ID=gene-AB69_RS11760;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AB69_RS11760;old_locus_tag=AB69_2245 NZ_JHDO01000087.1 Protein Homology CDS 68598 71915 . + 0 ID=cds-WP_000043759.1;Parent=gene-AB69_RS11760;Dbxref=GenBank:WP_000043759.1;Name=WP_000043759.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AB69_RS11760;product=diguanylate cyclase;protein_id=WP_000043759.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 72033 72881 . - . ID=gene-AB69_RS11755;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AB69_RS11755;old_locus_tag=AB69_2246 NZ_JHDO01000087.1 Protein Homology CDS 72033 72881 . - 0 ID=cds-WP_000288400.1;Parent=gene-AB69_RS11755;Dbxref=GenBank:WP_000288400.1;Name=WP_000288400.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310904.1;locus_tag=AB69_RS11755;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288400.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 73015 74367 . + . ID=gene-AB69_RS11750;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AB69_RS11750;old_locus_tag=AB69_2247 NZ_JHDO01000087.1 Protein Homology CDS 73015 74367 . + 0 ID=cds-WP_000469697.1;Parent=gene-AB69_RS11750;Dbxref=GenBank:WP_000469697.1;Name=WP_000469697.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AB69_RS11750;product=molecular chaperone;protein_id=WP_000469697.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 74380 76326 . - . ID=gene-AB69_RS11745;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AB69_RS11745;old_locus_tag=AB69_2248 NZ_JHDO01000087.1 Protein Homology CDS 74380 76326 . - 0 ID=cds-WP_000856085.1;Parent=gene-AB69_RS11745;Dbxref=GenBank:WP_000856085.1;Name=WP_000856085.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416574.1;locus_tag=AB69_RS11745;product=protein kinase YegI;protein_id=WP_000856085.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 76526 76987 . + . ID=gene-AB69_RS11740;Name=yegJ;gbkey=Gene;gene=yegJ;gene_biotype=protein_coding;locus_tag=AB69_RS11740;old_locus_tag=AB69_2249 NZ_JHDO01000087.1 Protein Homology CDS 76526 76987 . + 0 ID=cds-WP_000722348.1;Parent=gene-AB69_RS11740;Dbxref=GenBank:WP_000722348.1;Name=WP_000722348.1;gbkey=CDS;gene=yegJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416575.1;locus_tag=AB69_RS11740;product=YegJ family protein;protein_id=WP_000722348.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 77052 77813 . - . ID=gene-AB69_RS11735;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AB69_RS11735;old_locus_tag=AB69_2250 NZ_JHDO01000087.1 Protein Homology CDS 77052 77813 . - 0 ID=cds-WP_000119090.1;Parent=gene-AB69_RS11735;Dbxref=GenBank:WP_000119090.1;Name=WP_000119090.1;gbkey=CDS;gene=pphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416576.1;locus_tag=AB69_RS11735;product=protein-serine/threonine phosphatase PphC;protein_id=WP_000119090.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 77810 78469 . - . ID=gene-AB69_RS11730;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AB69_RS11730;old_locus_tag=AB69_2251 NZ_JHDO01000087.1 Protein Homology CDS 77810 78469 . - 0 ID=cds-WP_000003154.1;Parent=gene-AB69_RS11730;Dbxref=GenBank:WP_000003154.1;Name=WP_000003154.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416577.1;locus_tag=AB69_RS11730;product=vWA domain-containing protein;protein_id=WP_000003154.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 78690 78749 . - . ID=gene-AB69_RS28750;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AB69_RS28750 NZ_JHDO01000087.1 Protein Homology CDS 78690 78749 . - 0 ID=cds-WP_010723109.1;Parent=gene-AB69_RS28750;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AB69_RS28750;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 79022 79078 . - . ID=gene-AB69_RS29380;Name=AB69_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29380 NZ_JHDO01000087.1 Protein Homology CDS 79022 79078 . - 0 ID=cds-WP_001386899.1;Parent=gene-AB69_RS29380;Dbxref=GenBank:WP_001386899.1;Name=WP_001386899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AB69_RS29380;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386899.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 79357 80604 . + . ID=gene-AB69_RS11725;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AB69_RS11725;old_locus_tag=AB69_2252 NZ_JHDO01000087.1 Protein Homology CDS 79357 80604 . + 0 ID=cds-WP_000679013.1;Parent=gene-AB69_RS11725;Dbxref=GenBank:WP_000679013.1;Name=WP_000679013.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AB69_RS11725;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000679013.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 80604 83726 . + . ID=gene-AB69_RS11720;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AB69_RS11720;old_locus_tag=AB69_2253 NZ_JHDO01000087.1 Protein Homology CDS 80604 83726 . + 0 ID=cds-WP_001197905.1;Parent=gene-AB69_RS11720;Dbxref=GenBank:WP_001197905.1;Name=WP_001197905.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310910.1;locus_tag=AB69_RS11720;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197905.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 83727 86804 . + . ID=gene-AB69_RS11715;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AB69_RS11715;old_locus_tag=AB69_2254 NZ_JHDO01000087.1 Protein Homology CDS 83727 86804 . + 0 ID=cds-WP_000667549.1;Parent=gene-AB69_RS11715;Dbxref=GenBank:WP_000667549.1;Name=WP_000667549.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310911.1;locus_tag=AB69_RS11715;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_000667549.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 86805 88220 . + . ID=gene-AB69_RS11710;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB69_RS11710;old_locus_tag=AB69_2255 NZ_JHDO01000087.1 Protein Homology CDS 86805 88220 . + 0 ID=cds-WP_000130850.1;Parent=gene-AB69_RS11710;Dbxref=GenBank:WP_000130850.1;Name=WP_000130850.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AB69_RS11710;product=MFS transporter;protein_id=WP_000130850.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 88217 89620 . + . ID=gene-AB69_RS11705;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AB69_RS11705;old_locus_tag=AB69_2256 NZ_JHDO01000087.1 Protein Homology CDS 88217 89620 . + 0 ID=cds-WP_000675150.1;Parent=gene-AB69_RS11705;Dbxref=GenBank:WP_000675150.1;Name=WP_000675150.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AB69_RS11705;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675150.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 89617 90339 . + . ID=gene-AB69_RS11700;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AB69_RS11700;old_locus_tag=AB69_2257 NZ_JHDO01000087.1 Protein Homology CDS 89617 90339 . + 0 ID=cds-WP_000137877.1;Parent=gene-AB69_RS11700;Dbxref=GenBank:WP_000137877.1;Name=WP_000137877.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AB69_RS11700;product=two-component system response regulator BaeR;protein_id=WP_000137877.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 90530 90862 . + . ID=gene-AB69_RS11695;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AB69_RS11695;old_locus_tag=AB69_2259 NZ_JHDO01000087.1 Protein Homology CDS 90530 90862 . + 0 ID=cds-WP_000929408.1;Parent=gene-AB69_RS11695;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AB69_RS11695;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 91009 92370 . + . ID=gene-AB69_RS11690;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AB69_RS11690;old_locus_tag=AB69_2260 NZ_JHDO01000087.1 Protein Homology CDS 91009 92370 . + 0 ID=cds-WP_000476014.1;Parent=gene-AB69_RS11690;Dbxref=GenBank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AB69_RS11690;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 92700 93017 . - . ID=gene-AB69_RS11685;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AB69_RS11685;old_locus_tag=AB69_2261 NZ_JHDO01000087.1 Protein Homology CDS 92700 93017 . - 0 ID=cds-WP_001394463.1;Parent=gene-AB69_RS11685;Dbxref=GenBank:WP_001394463.1;Name=WP_001394463.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=AB69_RS11685;product=protein YegR;protein_id=WP_001394463.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 93431 94330 . + . ID=gene-AB69_RS11680;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AB69_RS11680;old_locus_tag=AB69_2262 NZ_JHDO01000087.1 Protein Homology CDS 93431 94330 . + 0 ID=cds-WP_000807345.1;Parent=gene-AB69_RS11680;Dbxref=GenBank:WP_000807345.1;Name=WP_000807345.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416590.1;locus_tag=AB69_RS11680;product=lipid kinase YegS;protein_id=WP_000807345.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 94404 95057 . - . ID=gene-AB69_RS11675;Name=AB69_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11675;old_locus_tag=AB69_2263 NZ_JHDO01000087.1 Protein Homology CDS 94404 95057 . - 0 ID=cds-WP_000481293.1;Parent=gene-AB69_RS11675;Dbxref=GenBank:WP_000481293.1;Name=WP_000481293.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231048.1;locus_tag=AB69_RS11675;product=HAD family hydrolase;protein_id=WP_000481293.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 95102 96379 . - . ID=gene-AB69_RS11670;Name=AB69_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11670;old_locus_tag=AB69_2264 NZ_JHDO01000087.1 Protein Homology CDS 95102 96379 . - 0 ID=cds-WP_000060034.1;Parent=gene-AB69_RS11670;Dbxref=GenBank:WP_000060034.1;Name=WP_000060034.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687715.1;locus_tag=AB69_RS11670;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_000060034.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 96448 97911 . - . ID=gene-AB69_RS11665;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AB69_RS11665;old_locus_tag=AB69_2265 NZ_JHDO01000087.1 Protein Homology CDS 96448 97911 . - 0 ID=cds-WP_000280578.1;Parent=gene-AB69_RS11665;Dbxref=GenBank:WP_000280578.1;Name=WP_000280578.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692898.1;locus_tag=AB69_RS11665;product=xylulokinase;protein_id=WP_000280578.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 97925 99292 . - . ID=gene-AB69_RS11660;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=AB69_RS11660;old_locus_tag=AB69_2266 NZ_JHDO01000087.1 Protein Homology CDS 97925 99292 . - 0 ID=cds-WP_001005232.1;Parent=gene-AB69_RS11660;Dbxref=GenBank:WP_001005232.1;Name=WP_001005232.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227903.1;locus_tag=AB69_RS11660;product=D-arabinitol 4-dehydrogenase;protein_id=WP_001005232.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 99505 100446 . + . ID=gene-AB69_RS11655;Name=AB69_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11655;old_locus_tag=AB69_2267 NZ_JHDO01000087.1 Protein Homology CDS 99505 100446 . + 0 ID=cds-WP_001030845.1;Parent=gene-AB69_RS11655;Dbxref=GenBank:WP_001030845.1;Name=WP_001030845.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227904.1;locus_tag=AB69_RS11655;product=sugar-binding transcriptional regulator;protein_id=WP_001030845.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 100449 101480 . - . ID=gene-AB69_RS11650;Name=AB69_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11650;old_locus_tag=AB69_2268 NZ_JHDO01000087.1 Protein Homology CDS 100449 101480 . - 0 ID=cds-WP_000198985.1;Parent=gene-AB69_RS11650;Dbxref=GenBank:WP_000198985.1;Name=WP_000198985.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397485.1;locus_tag=AB69_RS11650;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000198985.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 101642 102391 . + . ID=gene-AB69_RS11645;Name=AB69_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11645;old_locus_tag=AB69_2269 NZ_JHDO01000087.1 Protein Homology CDS 101642 102391 . + 0 ID=cds-WP_001016801.1;Parent=gene-AB69_RS11645;Dbxref=GenBank:WP_001016801.1;Name=WP_001016801.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=AB69_RS11645;product=SDR family oxidoreductase;protein_id=WP_001016801.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 102402 104006 . + . ID=gene-AB69_RS11640;Name=AB69_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11640;old_locus_tag=AB69_2270 NZ_JHDO01000087.1 Protein Homology CDS 102402 104006 . + 0 ID=cds-WP_000156561.1;Parent=gene-AB69_RS11640;Dbxref=GenBank:WP_000156561.1;Name=WP_000156561.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695951.1;locus_tag=AB69_RS11640;product=FGGY family pentulose kinase;protein_id=WP_000156561.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 104108 105382 . + . ID=gene-AB69_RS11635;Name=AB69_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS11635;old_locus_tag=AB69_2271 NZ_JHDO01000087.1 Protein Homology CDS 104108 105382 . + 0 ID=cds-WP_032231333.1;Parent=gene-AB69_RS11635;Dbxref=GenBank:WP_032231333.1;Name=WP_032231333.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089318.1;locus_tag=AB69_RS11635;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_032231333.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 105439 106491 . - . ID=gene-AB69_RS11630;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AB69_RS11630;old_locus_tag=AB69_2272 NZ_JHDO01000087.1 Protein Homology CDS 105439 106491 . - 0 ID=cds-WP_000129550.1;Parent=gene-AB69_RS11630;Dbxref=GenBank:WP_000129550.1;Name=WP_000129550.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AB69_RS11630;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129550.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 106748 108025 . + . ID=gene-AB69_RS11625;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AB69_RS11625;old_locus_tag=AB69_2273 NZ_JHDO01000087.1 Protein Homology CDS 106748 108025 . + 0 ID=cds-WP_000858484.1;Parent=gene-AB69_RS11625;Dbxref=GenBank:WP_000858484.1;Name=WP_000858484.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;gene=yegT;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AB69_RS11625;product=nucleoside permease;protein_id=WP_000858484.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 108022 109026 . + . ID=gene-AB69_RS11620;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AB69_RS11620;old_locus_tag=AB69_2274 NZ_JHDO01000087.1 Protein Homology CDS 108022 109026 . + 0 ID=cds-WP_000846230.1;Parent=gene-AB69_RS11620;Dbxref=GenBank:WP_000846230.1;Name=WP_000846230.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AB69_RS11620;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846230.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 109023 109988 . + . ID=gene-AB69_RS11615;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AB69_RS11615;old_locus_tag=AB69_2275 NZ_JHDO01000087.1 Protein Homology CDS 109023 109988 . + 0 ID=cds-WP_000011958.1;Parent=gene-AB69_RS11615;Dbxref=GenBank:WP_000011958.1;Name=WP_000011958.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AB69_RS11615;product=carbohydrate kinase family protein;protein_id=WP_000011958.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 109962 110708 . - . ID=gene-AB69_RS11610;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AB69_RS11610;old_locus_tag=AB69_2276 NZ_JHDO01000087.1 Protein Homology CDS 109962 110708 . - 0 ID=cds-WP_000434038.1;Parent=gene-AB69_RS11610;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AB69_RS11610;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 110760 111578 . - . ID=gene-AB69_RS11605;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=AB69_RS11605;old_locus_tag=AB69_2277 NZ_JHDO01000087.1 Protein Homology CDS 110760 111578 . - 0 ID=cds-WP_001352238.1;Parent=gene-AB69_RS11605;Dbxref=GenBank:WP_001352238.1;Name=WP_001352238.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AB69_RS11605;product=glycoside hydrolase family 25 protein;protein_id=WP_001352238.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 111643 112443 . - . ID=gene-AB69_RS11600;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AB69_RS11600;old_locus_tag=AB69_2278 NZ_JHDO01000087.1 Protein Homology CDS 111643 112443 . - 0 ID=cds-WP_000822266.1;Parent=gene-AB69_RS11600;Dbxref=GenBank:WP_000822266.1;Name=WP_000822266.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AB69_RS11600;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822266.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 112440 113228 . - . ID=gene-AB69_RS11595;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AB69_RS11595;old_locus_tag=AB69_2279 NZ_JHDO01000087.1 Protein Homology CDS 112440 113228 . - 0 ID=cds-WP_001195568.1;Parent=gene-AB69_RS11595;Dbxref=GenBank:WP_001195568.1;Name=WP_001195568.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416607.1;locus_tag=AB69_RS11595;product=hydroxyethylthiazole kinase;protein_id=WP_001195568.1;transl_table=11 NZ_JHDO01000087.1 cmsearch riboswitch 113263 113359 . - . ID=id-NZ_JHDO01000087.1:113263..113359;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000087.1 RefSeq gene 113451 113723 . - . ID=gene-AB69_RS11590;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AB69_RS11590;old_locus_tag=AB69_2280 NZ_JHDO01000087.1 Protein Homology CDS 113451 113723 . - 0 ID=cds-WP_000019944.1;Parent=gene-AB69_RS11590;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AB69_RS11590;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 113865 114689 . + . ID=gene-AB69_RS11585;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AB69_RS11585;old_locus_tag=AB69_2281 NZ_JHDO01000087.1 Protein Homology CDS 113865 114689 . + 0 ID=cds-WP_000134632.1;Parent=gene-AB69_RS11585;Dbxref=GenBank:WP_000134632.1;Name=WP_000134632.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AB69_RS11585;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134632.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 114908 115246 . + . ID=gene-AB69_RS11580;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AB69_RS11580;old_locus_tag=AB69_2282 NZ_JHDO01000087.1 Protein Homology CDS 114908 115246 . + 0 ID=cds-WP_000153074.1;Parent=gene-AB69_RS11580;Dbxref=GenBank:WP_000153074.1;Name=WP_000153074.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707992.1;locus_tag=AB69_RS11580;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153074.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 115328 116362 . - . ID=gene-AB69_RS11575;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AB69_RS11575;old_locus_tag=AB69_2283 NZ_JHDO01000087.1 Protein Homology CDS 115328 116362 . - 0 ID=cds-WP_000405695.1;Parent=gene-AB69_RS11575;Dbxref=GenBank:WP_000405695.1;Name=WP_000405695.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AB69_RS11575;product=putative fimbrial-like adhesin protein;protein_id=WP_000405695.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 116378 118858 . - . ID=gene-AB69_RS11570;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AB69_RS11570;old_locus_tag=AB69_2284 NZ_JHDO01000087.1 Protein Homology CDS 116378 118858 . - 0 ID=cds-WP_000945452.1;Parent=gene-AB69_RS11570;Dbxref=GenBank:WP_000945452.1;Name=WP_000945452.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AB69_RS11570;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945452.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 118874 119548 . - . ID=gene-AB69_RS11565;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AB69_RS11565;old_locus_tag=AB69_2285 NZ_JHDO01000087.1 Protein Homology CDS 118874 119548 . - 0 ID=cds-WP_000677393.1;Parent=gene-AB69_RS11565;Dbxref=GenBank:WP_000677393.1;Name=WP_000677393.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AB69_RS11565;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677393.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 119628 120170 . - . ID=gene-AB69_RS11560;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AB69_RS11560;old_locus_tag=AB69_2286 NZ_JHDO01000087.1 Protein Homology CDS 119628 120170 . - 0 ID=cds-WP_000830456.1;Parent=gene-AB69_RS11560;Dbxref=GenBank:WP_000830456.1;Name=WP_000830456.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416614.1;locus_tag=AB69_RS11560;product=fimbrial protein;protein_id=WP_000830456.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 120463 120744 . - . ID=gene-AB69_RS0124595;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AB69_RS0124595 NZ_JHDO01000087.1 Protein Homology CDS 120463 120744 . - 0 ID=cds-WP_001324851.1;Parent=gene-AB69_RS0124595;Dbxref=GenBank:WP_001324851.1;Name=WP_001324851.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416615.1;locus_tag=AB69_RS0124595;product=YehE family protein;protein_id=WP_001324851.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 121007 122116 . - . ID=gene-AB69_RS11555;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AB69_RS11555;old_locus_tag=AB69_2288 NZ_JHDO01000087.1 Protein Homology CDS 121007 122116 . - 0 ID=cds-WP_001005448.1;Parent=gene-AB69_RS11555;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AB69_RS11555;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 122248 124281 . + . ID=gene-AB69_RS11550;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AB69_RS11550;old_locus_tag=AB69_2289 NZ_JHDO01000087.1 Protein Homology CDS 122248 124281 . + 0 ID=cds-WP_001350533.1;Parent=gene-AB69_RS11550;Dbxref=GenBank:WP_001350533.1;Name=WP_001350533.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416617.1;locus_tag=AB69_RS11550;product=methionine--tRNA ligase;protein_id=WP_001350533.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 124422 128216 . + . ID=gene-AB69_RS28755;Name=AB69_RS28755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28755;old_locus_tag=AB69_2291;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 124422 128216 . + 0 ID=cds-AB69_RS28755;Parent=gene-AB69_RS28755;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AB69_RS28755;product=DUF4132 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 128226 131858 . + . ID=gene-AB69_RS11540;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=protein_coding;locus_tag=AB69_RS11540;old_locus_tag=AB69_2292 NZ_JHDO01000087.1 Protein Homology CDS 128226 131858 . + 0 ID=cds-WP_000356822.1;Parent=gene-AB69_RS11540;Dbxref=GenBank:WP_000356822.1;Name=WP_000356822.1;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AB69_RS11540;product=DUF4132 domain-containing protein YehI;protein_id=WP_000356822.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 131919 132236 . + . ID=gene-AB69_RS11535;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AB69_RS11535;old_locus_tag=AB69_2293 NZ_JHDO01000087.1 Protein Homology CDS 131919 132236 . + 0 ID=cds-WP_000636925.1;Parent=gene-AB69_RS11535;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AB69_RS11535;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 132543 133631 . + . ID=gene-AB69_RS11530;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AB69_RS11530;old_locus_tag=AB69_2294 NZ_JHDO01000087.1 Protein Homology CDS 132543 133631 . + 0 ID=cds-WP_001430575.1;Parent=gene-AB69_RS11530;Dbxref=GenBank:WP_001430575.1;Name=WP_001430575.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416623.2;locus_tag=AB69_RS11530;product=ATP-binding protein;protein_id=WP_001430575.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 133642 135921 . + . ID=gene-AB69_RS11525;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AB69_RS11525;old_locus_tag=AB69_2295 NZ_JHDO01000087.1 Protein Homology CDS 133642 135921 . + 0 ID=cds-WP_001294387.1;Parent=gene-AB69_RS11525;Dbxref=GenBank:WP_001294387.1;Name=WP_001294387.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AB69_RS11525;product=DUF5682 family protein;protein_id=WP_001294387.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 135914 137050 . + . ID=gene-AB69_RS11520;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AB69_RS11520;old_locus_tag=AB69_2296 NZ_JHDO01000087.1 Protein Homology CDS 135914 137050 . + 0 ID=cds-WP_001333512.1;Parent=gene-AB69_RS11520;Dbxref=GenBank:WP_001333512.1;Name=WP_001333512.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AB69_RS11520;product=vWA domain-containing protein;protein_id=WP_001333512.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 137047 139047 . + . ID=gene-AB69_RS11515;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AB69_RS11515;old_locus_tag=AB69_2297 NZ_JHDO01000087.1 Protein Homology CDS 137047 139047 . + 0 ID=cds-WP_032235692.1;Parent=gene-AB69_RS11515;Dbxref=GenBank:WP_032235692.1;Name=WP_032235692.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AB69_RS11515;product=SWIM zinc finger family protein;protein_id=WP_032235692.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 139172 139633 . + . ID=gene-AB69_RS11510;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AB69_RS11510;old_locus_tag=AB69_2298 NZ_JHDO01000087.1 Protein Homology CDS 139172 139633 . + 0 ID=cds-WP_001295429.1;Parent=gene-AB69_RS11510;Dbxref=GenBank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AB69_RS11510;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 139673 140143 . - . ID=gene-AB69_RS11505;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AB69_RS11505;old_locus_tag=AB69_2299 NZ_JHDO01000087.1 Protein Homology CDS 139673 140143 . - 0 ID=cds-WP_000950409.1;Parent=gene-AB69_RS11505;Dbxref=GenBank:WP_000950409.1;Name=WP_000950409.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416628.1;locus_tag=AB69_RS11505;product=DUF1456 family protein;protein_id=WP_000950409.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 140190 140909 . - . ID=gene-AB69_RS11500;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AB69_RS11500;old_locus_tag=AB69_2300 NZ_JHDO01000087.1 Protein Homology CDS 140190 140909 . - 0 ID=cds-WP_000598641.1;Parent=gene-AB69_RS11500;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AB69_RS11500;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 140906 142591 . - . ID=gene-AB69_RS11495;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AB69_RS11495;old_locus_tag=AB69_2301 NZ_JHDO01000087.1 Protein Homology CDS 140906 142591 . - 0 ID=cds-WP_001295431.1;Parent=gene-AB69_RS11495;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AB69_RS11495;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 142813 143544 . + . ID=gene-AB69_RS11490;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AB69_RS11490;old_locus_tag=AB69_2302 NZ_JHDO01000087.1 Protein Homology CDS 142813 143544 . + 0 ID=cds-WP_032231336.1;Parent=gene-AB69_RS11490;Dbxref=GenBank:WP_032231336.1;Name=WP_032231336.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AB69_RS11490;product=HTH-type transcriptional regulator MlrA;protein_id=WP_032231336.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 143604 143711 . + . ID=gene-AB69_RS0124605;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AB69_RS0124605 NZ_JHDO01000087.1 Protein Homology CDS 143604 143711 . + 0 ID=cds-WP_001216963.1;Parent=gene-AB69_RS0124605;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AB69_RS0124605;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 143692 144423 . - . ID=gene-AB69_RS11485;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AB69_RS11485;old_locus_tag=AB69_2303 NZ_JHDO01000087.1 Protein Homology CDS 143692 144423 . - 0 ID=cds-WP_000783120.1;Parent=gene-AB69_RS11485;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AB69_RS11485;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 144428 145354 . - . ID=gene-AB69_RS11480;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AB69_RS11480;old_locus_tag=AB69_2304 NZ_JHDO01000087.1 Protein Homology CDS 144428 145354 . - 0 ID=cds-WP_000569315.1;Parent=gene-AB69_RS11480;Dbxref=GenBank:WP_000569315.1;Name=WP_000569315.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416633.1;locus_tag=AB69_RS11480;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569315.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 145347 146504 . - . ID=gene-AB69_RS11475;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AB69_RS11475;old_locus_tag=AB69_2305 NZ_JHDO01000087.1 Protein Homology CDS 145347 146504 . - 0 ID=cds-WP_000220837.1;Parent=gene-AB69_RS11475;Dbxref=GenBank:WP_000220837.1;Name=WP_000220837.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AB69_RS11475;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000220837.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 146511 147428 . - . ID=gene-AB69_RS11470;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AB69_RS11470;old_locus_tag=AB69_2306 NZ_JHDO01000087.1 Protein Homology CDS 146511 147428 . - 0 ID=cds-WP_001130308.1;Parent=gene-AB69_RS11470;Dbxref=GenBank:WP_001130308.1;Name=WP_001130308.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AB69_RS11470;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130308.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 147639 149936 . - . ID=gene-AB69_RS11465;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AB69_RS11465;old_locus_tag=AB69_2307 NZ_JHDO01000087.1 Protein Homology CDS 147639 149936 . - 0 ID=cds-WP_000871504.1;Parent=gene-AB69_RS11465;Dbxref=GenBank:WP_000871504.1;Name=WP_000871504.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AB69_RS11465;product=beta-glucosidase BglX;protein_id=WP_000871504.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 150132 151847 . + . ID=gene-AB69_RS11460;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AB69_RS11460;old_locus_tag=AB69_2309 NZ_JHDO01000087.1 Protein Homology CDS 150132 151847 . + 0 ID=cds-WP_000097403.1;Parent=gene-AB69_RS11460;Dbxref=GenBank:WP_000097403.1;Name=WP_000097403.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416637.1;locus_tag=AB69_RS11460;product=D-lactate dehydrogenase;protein_id=WP_000097403.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 151885 152817 . - . ID=gene-AB69_RS11455;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AB69_RS11455;old_locus_tag=AB69_2310 NZ_JHDO01000087.1 Protein Homology CDS 151885 152817 . - 0 ID=cds-WP_001319943.1;Parent=gene-AB69_RS11455;Dbxref=GenBank:WP_001319943.1;Name=WP_001319943.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=AB69_RS11455;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001319943.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 152991 153578 . - . ID=gene-AB69_RS11450;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AB69_RS11450;old_locus_tag=AB69_2311 NZ_JHDO01000087.1 Protein Homology CDS 152991 153578 . - 0 ID=cds-WP_001295454.1;Parent=gene-AB69_RS11450;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AB69_RS11450;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 153748 154326 . + . ID=gene-AB69_RS11445;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AB69_RS11445;old_locus_tag=AB69_2312 NZ_JHDO01000087.1 Protein Homology CDS 153748 154326 . + 0 ID=cds-WP_001296821.1;Parent=gene-AB69_RS11445;Dbxref=GenBank:WP_001296821.1;Name=WP_001296821.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AB69_RS11445;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 154456 155217 . - . ID=gene-AB69_RS11440;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AB69_RS11440;old_locus_tag=AB69_2313 NZ_JHDO01000087.1 Protein Homology CDS 154456 155217 . - 0 ID=cds-WP_000079538.1;Parent=gene-AB69_RS11440;Dbxref=GenBank:WP_000079538.1;Name=WP_000079538.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416641.1;locus_tag=AB69_RS11440;product=SDR family oxidoreductase;protein_id=WP_000079538.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 155270 156706 . - . ID=gene-AB69_RS11435;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AB69_RS11435;old_locus_tag=AB69_2314 NZ_JHDO01000087.1 Protein Homology CDS 155270 156706 . - 0 ID=cds-WP_001078139.1;Parent=gene-AB69_RS11435;Dbxref=GenBank:WP_001078139.1;Name=WP_001078139.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AB69_RS11435;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078139.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 156930 157013 . + . ID=gene-AB69_RS0124610;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AB69_RS0124610 NZ_JHDO01000087.1 Protein Homology CDS 156930 157013 . + 0 ID=cds-WP_032231337.1;Parent=gene-AB69_RS0124610;Dbxref=GenBank:WP_032231337.1;Name=WP_032231337.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AB69_RS0124610;product=small membrane protein YohP;protein_id=WP_032231337.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 157386 158333 . - . ID=gene-AB69_RS11430;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AB69_RS11430;old_locus_tag=AB69_2315 NZ_JHDO01000087.1 Protein Homology CDS 157386 158333 . - 0 ID=cds-WP_001264861.1;Parent=gene-AB69_RS11430;Dbxref=GenBank:WP_001264861.1;Name=WP_001264861.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AB69_RS11430;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264861.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 158572 158970 . + . ID=gene-AB69_RS11425;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AB69_RS11425;old_locus_tag=AB69_2316 NZ_JHDO01000087.1 Protein Homology CDS 158572 158970 . + 0 ID=cds-WP_001295452.1;Parent=gene-AB69_RS11425;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AB69_RS11425;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 158967 159662 . + . ID=gene-AB69_RS11420;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AB69_RS11420;old_locus_tag=AB69_2317 NZ_JHDO01000087.1 Protein Homology CDS 158967 159662 . + 0 ID=cds-WP_000968208.1;Parent=gene-AB69_RS11420;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AB69_RS11420;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 159792 160676 . + . ID=gene-AB69_RS11415;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AB69_RS11415;old_locus_tag=AB69_2318 NZ_JHDO01000087.1 Protein Homology CDS 159792 160676 . + 0 ID=cds-WP_000553555.1;Parent=gene-AB69_RS11415;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AB69_RS11415;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 160826 161545 . + . ID=gene-AB69_RS11410;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AB69_RS11410;old_locus_tag=AB69_2319 NZ_JHDO01000087.1 Protein Homology CDS 160826 161545 . + 0 ID=cds-WP_000920064.1;Parent=gene-AB69_RS11410;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AB69_RS11410;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 161548 161787 . + . ID=gene-AB69_RS11405;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AB69_RS11405;old_locus_tag=AB69_2320 NZ_JHDO01000087.1 Protein Homology CDS 161548 161787 . + 0 ID=cds-WP_000383096.1;Parent=gene-AB69_RS11405;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AB69_RS11405;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 161981 163219 . + . ID=gene-AB69_RS11400;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AB69_RS11400;old_locus_tag=AB69_2321 NZ_JHDO01000087.1 Protein Homology CDS 161981 163219 . + 0 ID=cds-WP_001136389.1;Parent=gene-AB69_RS11400;Dbxref=GenBank:WP_001136389.1;Name=WP_001136389.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AB69_RS11400;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136389.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 163213 164448 . + . ID=gene-AB69_RS11395;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AB69_RS11395;old_locus_tag=AB69_2322 NZ_JHDO01000087.1 Protein Homology CDS 163213 164448 . + 0 ID=cds-WP_000956071.1;Parent=gene-AB69_RS11395;Dbxref=GenBank:WP_000956071.1;Name=WP_000956071.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AB69_RS11395;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956071.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 164691 165701 . - . ID=gene-AB69_RS11390;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AB69_RS11390;old_locus_tag=AB69_2323 NZ_JHDO01000087.1 Protein Homology CDS 164691 165701 . - 0 ID=cds-WP_001275118.1;Parent=gene-AB69_RS11390;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AB69_RS11390;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 165717 167237 . - . ID=gene-AB69_RS11385;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AB69_RS11385;old_locus_tag=AB69_2324 NZ_JHDO01000087.1 Protein Homology CDS 165717 167237 . - 0 ID=cds-WP_032231338.1;Parent=gene-AB69_RS11385;Dbxref=GenBank:WP_032231338.1;Name=WP_032231338.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AB69_RS11385;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_032231338.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 167298 168296 . - . ID=gene-AB69_RS11380;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AB69_RS11380;old_locus_tag=AB69_2325 NZ_JHDO01000087.1 Protein Homology CDS 167298 168296 . - 0 ID=cds-WP_001036964.1;Parent=gene-AB69_RS11380;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AB69_RS11380;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 168576 169616 . - . ID=gene-AB69_RS11375;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AB69_RS11375;old_locus_tag=AB69_2326 NZ_JHDO01000087.1 Protein Homology CDS 168576 169616 . - 0 ID=cds-WP_000628648.1;Parent=gene-AB69_RS11375;Dbxref=GenBank:WP_000628648.1;Name=WP_000628648.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416656.1;locus_tag=AB69_RS11375;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628648.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 169758 170915 . - . ID=gene-AB69_RS11370;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AB69_RS11370;old_locus_tag=AB69_2327 NZ_JHDO01000087.1 Protein Homology CDS 169758 170915 . - 0 ID=cds-WP_000440926.1;Parent=gene-AB69_RS11370;Dbxref=GenBank:WP_000440926.1;Name=WP_000440926.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AB69_RS11370;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440926.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 170932 171600 . - . ID=gene-AB69_RS11365;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AB69_RS11365;old_locus_tag=AB69_2328 NZ_JHDO01000087.1 Protein Homology CDS 170932 171600 . - 0 ID=cds-WP_001139613.1;Parent=gene-AB69_RS11365;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AB69_RS11365;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 171858 172694 . + . ID=gene-AB69_RS11360;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AB69_RS11360;old_locus_tag=AB69_2329 NZ_JHDO01000087.1 Protein Homology CDS 171858 172694 . + 0 ID=cds-WP_000425438.1;Parent=gene-AB69_RS11360;Dbxref=GenBank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AB69_RS11360;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 172726 174717 . - . ID=gene-AB69_RS11355;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AB69_RS11355;old_locus_tag=AB69_2330 NZ_JHDO01000087.1 Protein Homology CDS 172726 174717 . - 0 ID=cds-WP_000489247.1;Parent=gene-AB69_RS11355;Dbxref=GenBank:WP_000489247.1;Name=WP_000489247.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AB69_RS11355;product=catecholate siderophore receptor CirA;protein_id=WP_000489247.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 175011 176480 . - . ID=gene-AB69_RS11350;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AB69_RS11350;old_locus_tag=AB69_2331 NZ_JHDO01000087.1 Protein Homology CDS 175011 176480 . - 0 ID=cds-WP_000253273.1;Parent=gene-AB69_RS11350;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AB69_RS11350;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 176685 177566 . - . ID=gene-AB69_RS11345;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB69_RS11345;old_locus_tag=AB69_2332 NZ_JHDO01000087.1 Protein Homology CDS 176685 177566 . - 0 ID=cds-WP_000548294.1;Parent=gene-AB69_RS11345;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AB69_RS11345;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 177665 178714 . + . ID=gene-AB69_RS11340;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AB69_RS11340;old_locus_tag=AB69_2333 NZ_JHDO01000087.1 Protein Homology CDS 177665 178714 . + 0 ID=cds-WP_032231340.1;Parent=gene-AB69_RS11340;Dbxref=GenBank:WP_032231340.1;Name=WP_032231340.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AB69_RS11340;product=YeiH family protein;protein_id=WP_032231340.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 178788 179645 . + . ID=gene-AB69_RS11335;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AB69_RS11335;old_locus_tag=AB69_2334 NZ_JHDO01000087.1 Protein Homology CDS 178788 179645 . + 0 ID=cds-WP_000873894.1;Parent=gene-AB69_RS11335;Dbxref=GenBank:WP_000873894.1;Name=WP_000873894.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AB69_RS11335;product=deoxyribonuclease IV;protein_id=WP_000873894.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 179648 180736 . + . ID=gene-AB69_RS11330;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AB69_RS11330;old_locus_tag=AB69_2335 NZ_JHDO01000087.1 Protein Homology CDS 179648 180736 . + 0 ID=cds-WP_001065016.1;Parent=gene-AB69_RS11330;Dbxref=GenBank:WP_001065016.1;Name=WP_001065016.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416665.1;locus_tag=AB69_RS11330;product=sugar kinase;protein_id=WP_001065016.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 180843 182092 . - . ID=gene-AB69_RS11325;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=pseudogene;locus_tag=AB69_RS11325;old_locus_tag=AB69_2336;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 180843 182092 . - 0 ID=cds-AB69_RS11325;Parent=gene-AB69_RS11325;Note=frameshifted;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: protein motif:HMM:NF019285.6;locus_tag=AB69_RS11325;product=NupC/NupG family nucleoside CNT transporter;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 182192 183133 . - . ID=gene-AB69_RS11320;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AB69_RS11320;old_locus_tag=AB69_2337 NZ_JHDO01000087.1 Protein Homology CDS 182192 183133 . - 0 ID=cds-WP_000415429.1;Parent=gene-AB69_RS11320;Dbxref=GenBank:WP_000415429.1;Name=WP_000415429.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AB69_RS11320;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415429.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 183263 183961 . + . ID=gene-AB69_RS11315;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AB69_RS11315;old_locus_tag=AB69_2338 NZ_JHDO01000087.1 Protein Homology CDS 183263 183961 . + 0 ID=cds-WP_000658575.1;Parent=gene-AB69_RS11315;Dbxref=GenBank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AB69_RS11315;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 184032 185282 . - . ID=gene-AB69_RS11310;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AB69_RS11310;old_locus_tag=AB69_2339 NZ_JHDO01000087.1 Protein Homology CDS 184032 185282 . - 0 ID=cds-WP_000353878.1;Parent=gene-AB69_RS11310;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AB69_RS11310;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 185376 186308 . - . ID=gene-AB69_RS11305;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AB69_RS11305;old_locus_tag=AB69_2340 NZ_JHDO01000087.1 Protein Homology CDS 185376 186308 . - 0 ID=cds-WP_016230878.1;Parent=gene-AB69_RS11305;Dbxref=GenBank:WP_016230878.1;Name=WP_016230878.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AB69_RS11305;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_016230878.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 186296 187237 . - . ID=gene-AB69_RS11300;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AB69_RS11300;old_locus_tag=AB69_2341 NZ_JHDO01000087.1 Protein Homology CDS 186296 187237 . - 0 ID=cds-WP_001208118.1;Parent=gene-AB69_RS11300;Dbxref=GenBank:WP_001208118.1;Name=WP_001208118.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416671.1;locus_tag=AB69_RS11300;product=pseudouridine kinase;protein_id=WP_001208118.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 187660 189351 . - . ID=gene-AB69_RS11295;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AB69_RS11295;old_locus_tag=AB69_2343 NZ_JHDO01000087.1 Protein Homology CDS 187660 189351 . - 0 ID=cds-WP_000854447.1;Parent=gene-AB69_RS11295;Dbxref=GenBank:WP_000854447.1;Name=WP_000854447.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416672.1;locus_tag=AB69_RS11295;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854447.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 189368 190306 . - . ID=gene-AB69_RS11290;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AB69_RS11290;old_locus_tag=AB69_2344 NZ_JHDO01000087.1 Protein Homology CDS 189368 190306 . - 0 ID=cds-WP_000091263.1;Parent=gene-AB69_RS11290;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AB69_RS11290;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 190306 191436 . - . ID=gene-AB69_RS11285;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AB69_RS11285;old_locus_tag=AB69_2345 NZ_JHDO01000087.1 Protein Homology CDS 190306 191436 . - 0 ID=cds-WP_000487246.1;Parent=gene-AB69_RS11285;Dbxref=GenBank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AB69_RS11285;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 191804 192985 . + . ID=gene-AB69_RS11280;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AB69_RS11280;old_locus_tag=AB69_2348 NZ_JHDO01000087.1 Protein Homology CDS 191804 192985 . + 0 ID=cds-WP_000551969.1;Parent=gene-AB69_RS11280;Dbxref=GenBank:WP_000551969.1;Name=WP_000551969.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AB69_RS11280;product=sugar efflux transporter SetB;protein_id=WP_000551969.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 192982 193236 . - . ID=gene-AB69_RS0124625;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AB69_RS0124625;old_locus_tag=AB69_2349 NZ_JHDO01000087.1 Protein Homology CDS 192982 193236 . - 0 ID=cds-WP_000389030.1;Parent=gene-AB69_RS0124625;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AB69_RS0124625;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 193391 193963 . + . ID=gene-AB69_RS11275;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AB69_RS11275;old_locus_tag=AB69_2351 NZ_JHDO01000087.1 Protein Homology CDS 193391 193963 . + 0 ID=cds-WP_001136827.1;Parent=gene-AB69_RS11275;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AB69_RS11275;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 194186 195652 . + . ID=gene-AB69_RS11270;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AB69_RS11270;old_locus_tag=AB69_2352 NZ_JHDO01000087.1 Protein Homology CDS 194186 195652 . + 0 ID=cds-WP_001091940.1;Parent=gene-AB69_RS11270;Dbxref=GenBank:WP_001091940.1;Name=WP_001091940.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AB69_RS11270;product=mannitol dehydrogenase family protein;protein_id=WP_001091940.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 195770 196756 . + . ID=gene-AB69_RS11265;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AB69_RS11265;old_locus_tag=AB69_2353 NZ_JHDO01000087.1 Protein Homology CDS 195770 196756 . + 0 ID=cds-WP_000198828.1;Parent=gene-AB69_RS11265;Dbxref=GenBank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416678.1;locus_tag=AB69_RS11265;product=zinc-binding GTPase YeiR;protein_id=WP_000198828.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 196795 197508 . + . ID=gene-AB69_RS11260;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AB69_RS11260;old_locus_tag=AB69_2354 NZ_JHDO01000087.1 Protein Homology CDS 196795 197508 . + 0 ID=cds-WP_000594599.1;Parent=gene-AB69_RS11260;Dbxref=GenBank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AB69_RS11260;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 197920 198486 . + . ID=gene-AB69_RS11255;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AB69_RS11255;old_locus_tag=AB69_2355 NZ_JHDO01000087.1 Protein Homology CDS 197920 198486 . + 0 ID=cds-WP_000241011.1;Parent=gene-AB69_RS11255;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AB69_RS11255;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 198667 200223 . + . ID=gene-AB69_RS11250;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AB69_RS11250;old_locus_tag=AB69_2356 NZ_JHDO01000087.1 Protein Homology CDS 198667 200223 . + 0 ID=cds-WP_000470560.1;Parent=gene-AB69_RS11250;Dbxref=GenBank:WP_000470560.1;Name=WP_000470560.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AB69_RS11250;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470560.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 200305 202119 . + . ID=gene-AB69_RS11245;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AB69_RS11245;old_locus_tag=AB69_2357 NZ_JHDO01000087.1 Protein Homology CDS 200305 202119 . + 0 ID=cds-WP_000637046.1;Parent=gene-AB69_RS11245;Dbxref=GenBank:WP_000637046.1;Name=WP_000637046.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AB69_RS11245;product=extracellular solute-binding protein;protein_id=WP_000637046.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 202120 203214 . + . ID=gene-AB69_RS11240;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AB69_RS11240;old_locus_tag=AB69_2358 NZ_JHDO01000087.1 Protein Homology CDS 202120 203214 . + 0 ID=cds-WP_000501604.1;Parent=gene-AB69_RS11240;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AB69_RS11240;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 203214 204239 . + . ID=gene-AB69_RS11235;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AB69_RS11235;old_locus_tag=AB69_2359 NZ_JHDO01000087.1 Protein Homology CDS 203214 204239 . + 0 ID=cds-WP_000088916.1;Parent=gene-AB69_RS11235;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AB69_RS11235;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 204241 205830 . + . ID=gene-AB69_RS11230;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AB69_RS11230;old_locus_tag=AB69_2360 NZ_JHDO01000087.1 Protein Homology CDS 204241 205830 . + 0 ID=cds-WP_000194927.1;Parent=gene-AB69_RS11230;Dbxref=GenBank:WP_000194927.1;Name=WP_000194927.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AB69_RS11230;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000194927.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 205834 206178 . - . ID=gene-AB69_RS11225;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AB69_RS11225;old_locus_tag=AB69_2361 NZ_JHDO01000087.1 Protein Homology CDS 205834 206178 . - 0 ID=cds-WP_000202798.1;Parent=gene-AB69_RS11225;Dbxref=GenBank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AB69_RS11225;product=YejG family protein;protein_id=WP_000202798.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 206511 207701 . - . ID=gene-AB69_RS11220;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AB69_RS11220;old_locus_tag=AB69_2362 NZ_JHDO01000087.1 Protein Homology CDS 206511 207701 . - 0 ID=cds-WP_000213361.1;Parent=gene-AB69_RS11220;Dbxref=GenBank:WP_000213361.1;Name=WP_000213361.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=AB69_RS11220;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213361.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 207729 208424 . - . ID=gene-AB69_RS11215;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AB69_RS11215;old_locus_tag=AB69_2363 NZ_JHDO01000087.1 Protein Homology CDS 207729 208424 . - 0 ID=cds-WP_001234850.1;Parent=gene-AB69_RS11215;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AB69_RS11215;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 208573 210333 . + . ID=gene-AB69_RS11210;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AB69_RS11210;old_locus_tag=AB69_2364 NZ_JHDO01000087.1 Protein Homology CDS 208573 210333 . + 0 ID=cds-WP_032231342.1;Parent=gene-AB69_RS11210;Dbxref=GenBank:WP_032231342.1;Name=WP_032231342.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=AB69_RS11210;product=DEAD/DEAH box helicase;protein_id=WP_032231342.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 210458 210742 . + . ID=gene-AB69_RS11205;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AB69_RS11205;old_locus_tag=AB69_2365 NZ_JHDO01000087.1 Protein Homology CDS 210458 210742 . + 0 ID=cds-WP_000494183.1;Parent=gene-AB69_RS11205;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AB69_RS11205;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 210881 211888 . - . ID=gene-AB69_RS11200;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AB69_RS11200;old_locus_tag=AB69_2366 NZ_JHDO01000087.1 Protein Homology CDS 210881 211888 . - 0 ID=cds-WP_001394504.1;Parent=gene-AB69_RS11200;Dbxref=GenBank:WP_001394504.1;Name=WP_001394504.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416691.1;locus_tag=AB69_RS11200;product=nucleoid-associated protein YejK;protein_id=WP_001394504.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 212070 212297 . + . ID=gene-AB69_RS11195;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AB69_RS11195;old_locus_tag=AB69_2368 NZ_JHDO01000087.1 Protein Homology CDS 212070 212297 . + 0 ID=cds-WP_001135667.1;Parent=gene-AB69_RS11195;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AB69_RS11195;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 212317 214077 . + . ID=gene-AB69_RS11190;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AB69_RS11190;old_locus_tag=AB69_2369 NZ_JHDO01000087.1 Protein Homology CDS 212317 214077 . + 0 ID=cds-WP_000256203.1;Parent=gene-AB69_RS11190;Dbxref=GenBank:WP_000256203.1;Name=WP_000256203.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AB69_RS11190;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256203.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 214152 214228 . + . ID=gene-AB69_RS11185;Name=AB69_RS11185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS11185;old_locus_tag=AB69_2370 NZ_JHDO01000087.1 tRNAscan-SE tRNA 214152 214228 . + . ID=rna-AB69_RS11185;Parent=gene-AB69_RS11185;anticodon=(pos:214186..214188);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS11185;product=tRNA-Pro NZ_JHDO01000087.1 tRNAscan-SE exon 214152 214228 . + . ID=exon-AB69_RS11185-1;Parent=rna-AB69_RS11185;anticodon=(pos:214186..214188);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS11185;product=tRNA-Pro NZ_JHDO01000087.1 RefSeq gene 214331 216922 . - . ID=gene-AB69_RS11180;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AB69_RS11180;old_locus_tag=AB69_2371 NZ_JHDO01000087.1 Protein Homology CDS 214331 216922 . - 0 ID=cds-WP_000554226.1;Parent=gene-AB69_RS11180;Dbxref=GenBank:WP_000554226.1;Name=WP_000554226.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AB69_RS11180;product=autotransporter YejO;protein_id=WP_000554226.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 217242 217889 . + . ID=gene-AB69_RS11175;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AB69_RS11175;old_locus_tag=AB69_2372 NZ_JHDO01000087.1 Protein Homology CDS 217242 217889 . + 0 ID=cds-WP_001113637.1;Parent=gene-AB69_RS11175;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AB69_RS11175;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 218100 219152 . - . ID=gene-AB69_RS11170;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AB69_RS11170;old_locus_tag=AB69_2373 NZ_JHDO01000087.1 Protein Homology CDS 218100 219152 . - 0 ID=cds-WP_001211575.1;Parent=gene-AB69_RS11170;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AB69_RS11170;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 219149 219706 . - . ID=gene-AB69_RS11165;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AB69_RS11165;old_locus_tag=AB69_2374 NZ_JHDO01000087.1 Protein Homology CDS 219149 219706 . - 0 ID=cds-WP_032231343.1;Parent=gene-AB69_RS11165;Dbxref=GenBank:WP_032231343.1;Name=WP_032231343.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AB69_RS11165;product=thiol:disulfide interchange protein DsbE;protein_id=WP_032231343.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 219703 221646 . - . ID=gene-AB69_RS11160;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AB69_RS11160;old_locus_tag=AB69_2375 NZ_JHDO01000087.1 Protein Homology CDS 219703 221646 . - 0 ID=cds-WP_000982447.1;Parent=gene-AB69_RS11160;Dbxref=GenBank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AB69_RS11160;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 221643 222122 . - . ID=gene-AB69_RS11155;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AB69_RS11155;old_locus_tag=AB69_2376 NZ_JHDO01000087.1 Protein Homology CDS 221643 222122 . - 0 ID=cds-WP_001026418.1;Parent=gene-AB69_RS11155;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AB69_RS11155;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 222119 222328 . - . ID=gene-AB69_RS11150;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AB69_RS11150;old_locus_tag=AB69_2377 NZ_JHDO01000087.1 Protein Homology CDS 222119 222328 . - 0 ID=cds-WP_000186540.1;Parent=gene-AB69_RS11150;Dbxref=GenBank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AB69_RS11150;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 222325 223062 . - . ID=gene-AB69_RS11145;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AB69_RS11145;old_locus_tag=AB69_2378 NZ_JHDO01000087.1 Protein Homology CDS 222325 223062 . - 0 ID=cds-WP_001295447.1;Parent=gene-AB69_RS11145;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AB69_RS11145;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 223104 223766 . - . ID=gene-AB69_RS11140;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AB69_RS11140;old_locus_tag=AB69_2379 NZ_JHDO01000087.1 Protein Homology CDS 223104 223766 . - 0 ID=cds-WP_000971730.1;Parent=gene-AB69_RS11140;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AB69_RS11140;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 223763 224386 . - . ID=gene-AB69_RS11135;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AB69_RS11135;old_locus_tag=AB69_2380 NZ_JHDO01000087.1 Protein Homology CDS 223763 224386 . - 0 ID=cds-WP_000525587.1;Parent=gene-AB69_RS11135;Dbxref=GenBank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AB69_RS11135;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 224399 225001 . - . ID=gene-AB69_RS11130;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AB69_RS11130;old_locus_tag=AB69_2381 NZ_JHDO01000087.1 Protein Homology CDS 224399 225001 . - 0 ID=cds-WP_000528376.1;Parent=gene-AB69_RS11130;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AB69_RS11130;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 225011 225460 . - . ID=gene-AB69_RS11125;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AB69_RS11125;old_locus_tag=AB69_2382 NZ_JHDO01000087.1 Protein Homology CDS 225011 225460 . - 0 ID=cds-WP_000835174.1;Parent=gene-AB69_RS11125;Dbxref=GenBank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AB69_RS11125;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 225457 226320 . - . ID=gene-AB69_RS11120;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AB69_RS11120;old_locus_tag=AB69_2383 NZ_JHDO01000087.1 Protein Homology CDS 225457 226320 . - 0 ID=cds-WP_000013515.1;Parent=gene-AB69_RS11120;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AB69_RS11120;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 226307 227002 . - . ID=gene-AB69_RS11115;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AB69_RS11115;old_locus_tag=AB69_2384 NZ_JHDO01000087.1 Protein Homology CDS 226307 227002 . - 0 ID=cds-WP_032231345.1;Parent=gene-AB69_RS11115;Dbxref=GenBank:WP_032231345.1;Name=WP_032231345.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AB69_RS11115;product=ferredoxin-type protein NapG;protein_id=WP_032231345.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 227009 229495 . - . ID=gene-AB69_RS11110;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AB69_RS11110;old_locus_tag=AB69_2385 NZ_JHDO01000087.1 Protein Homology CDS 227009 229495 . - 0 ID=cds-WP_000778061.1;Parent=gene-AB69_RS11110;Dbxref=GenBank:WP_000778061.1;Name=WP_000778061.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416710.1;locus_tag=AB69_RS11110;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778061.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 229492 229755 . - . ID=gene-AB69_RS11105;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AB69_RS11105;old_locus_tag=AB69_2386 NZ_JHDO01000087.1 Protein Homology CDS 229492 229755 . - 0 ID=cds-WP_000557378.1;Parent=gene-AB69_RS11105;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AB69_RS11105;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 229745 230239 . - . ID=gene-AB69_RS11100;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AB69_RS11100;old_locus_tag=AB69_2387 NZ_JHDO01000087.1 Protein Homology CDS 229745 230239 . - 0 ID=cds-WP_000686723.1;Parent=gene-AB69_RS11100;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AB69_RS11100;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 230348 230512 . + . ID=gene-AB69_RS11095;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AB69_RS11095;old_locus_tag=AB69_2388 NZ_JHDO01000087.1 Protein Homology CDS 230348 230512 . + 0 ID=cds-WP_001310984.1;Parent=gene-AB69_RS11095;Dbxref=GenBank:WP_001310984.1;Name=WP_001310984.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AB69_RS11095;product=protein YojO;protein_id=WP_001310984.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 230626 231135 . + . ID=gene-AB69_RS11090;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AB69_RS11090;old_locus_tag=AB69_2389 NZ_JHDO01000087.1 Protein Homology CDS 230626 231135 . + 0 ID=cds-WP_000712249.1;Parent=gene-AB69_RS11090;Dbxref=GenBank:WP_000712249.1;Name=WP_000712249.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AB69_RS11090;product=serine protease inhibitor ecotin;protein_id=WP_000712249.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 231511 233157 . - . ID=gene-AB69_RS11085;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AB69_RS11085;old_locus_tag=AB69_2390 NZ_JHDO01000087.1 Protein Homology CDS 231511 233157 . - 0 ID=cds-WP_000758077.1;Parent=gene-AB69_RS11085;Dbxref=GenBank:WP_000758077.1;Name=WP_000758077.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416714.1;locus_tag=AB69_RS11085;product=malate dehydrogenase (quinone);protein_id=WP_000758077.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 233375 235018 . - . ID=gene-AB69_RS11080;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AB69_RS11080;old_locus_tag=AB69_2391 NZ_JHDO01000087.1 Protein Homology CDS 233375 235018 . - 0 ID=cds-WP_032231346.1;Parent=gene-AB69_RS11080;Dbxref=GenBank:WP_032231346.1;Name=WP_032231346.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AB69_RS11080;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_032231346.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 235094 235744 . - . ID=gene-AB69_RS11075;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AB69_RS11075;old_locus_tag=AB69_2392 NZ_JHDO01000087.1 Protein Homology CDS 235094 235744 . - 0 ID=cds-WP_000884971.1;Parent=gene-AB69_RS11075;Dbxref=GenBank:WP_000884971.1;Name=WP_000884971.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416716.1;locus_tag=AB69_RS11075;product=DNA oxidative demethylase AlkB;protein_id=WP_000884971.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 235744 236808 . - . ID=gene-AB69_RS11070;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AB69_RS11070;old_locus_tag=AB69_2393 NZ_JHDO01000087.1 Protein Homology CDS 235744 236808 . - 0 ID=cds-WP_032231347.1;Parent=gene-AB69_RS11070;Dbxref=GenBank:WP_032231347.1;Name=WP_032231347.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AB69_RS11070;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_032231347.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 236882 237937 . - . ID=gene-AB69_RS11065;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AB69_RS11065;old_locus_tag=AB69_2394 NZ_JHDO01000087.1 Protein Homology CDS 236882 237937 . - 0 ID=cds-WP_000406064.1;Parent=gene-AB69_RS11065;Dbxref=GenBank:WP_000406064.1;Name=WP_000406064.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AB69_RS11065;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406064.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 238049 239152 . - . ID=gene-AB69_RS11060;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AB69_RS11060;old_locus_tag=AB69_2395 NZ_JHDO01000087.1 Protein Homology CDS 238049 239152 . - 0 ID=cds-WP_000865568.1;Parent=gene-AB69_RS11060;Dbxref=GenBank:WP_000865568.1;Name=WP_000865568.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416719.1;locus_tag=AB69_RS11060;product=porin OmpC;protein_id=WP_000865568.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 239891 242563 . + . ID=gene-AB69_RS11055;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AB69_RS11055;old_locus_tag=AB69_2396 NZ_JHDO01000087.1 Protein Homology CDS 239891 242563 . + 0 ID=cds-WP_001249081.1;Parent=gene-AB69_RS11055;Dbxref=GenBank:WP_001249081.1;Name=WP_001249081.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416720.1;locus_tag=AB69_RS11055;product=phosphotransferase RcsD;protein_id=WP_001249081.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 242580 243230 . + . ID=gene-AB69_RS11050;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AB69_RS11050;old_locus_tag=AB69_2397 NZ_JHDO01000087.1 Protein Homology CDS 242580 243230 . + 0 ID=cds-WP_001061917.1;Parent=gene-AB69_RS11050;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AB69_RS11050;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 243430 246279 . - . ID=gene-AB69_RS11045;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AB69_RS11045;old_locus_tag=AB69_2398 NZ_JHDO01000087.1 Protein Homology CDS 243430 246279 . - 0 ID=cds-WP_000876011.1;Parent=gene-AB69_RS11045;Dbxref=GenBank:WP_000876011.1;Name=WP_000876011.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AB69_RS11045;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876011.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 246446 248272 . + . ID=gene-AB69_RS11040;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AB69_RS11040;old_locus_tag=AB69_2399 NZ_JHDO01000087.1 Protein Homology CDS 246446 248272 . + 0 ID=cds-WP_000559125.1;Parent=gene-AB69_RS11040;Dbxref=GenBank:WP_000559125.1;Name=WP_000559125.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AB69_RS11040;product=two-component system sensor histidine kinase AtoS;protein_id=WP_000559125.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 248269 249654 . + . ID=gene-AB69_RS11035;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AB69_RS11035;old_locus_tag=AB69_2400 NZ_JHDO01000087.1 Protein Homology CDS 248269 249654 . + 0 ID=cds-WP_000125282.1;Parent=gene-AB69_RS11035;Dbxref=GenBank:WP_000125282.1;Name=WP_000125282.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AB69_RS11035;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125282.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 249850 250512 . + . ID=gene-AB69_RS11030;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AB69_RS11030;old_locus_tag=AB69_2401 NZ_JHDO01000087.1 Protein Homology CDS 249850 250512 . + 0 ID=cds-WP_000850540.1;Parent=gene-AB69_RS11030;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AB69_RS11030;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 250512 251162 . + . ID=gene-AB69_RS11025;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AB69_RS11025;old_locus_tag=AB69_2402 NZ_JHDO01000087.1 Protein Homology CDS 250512 251162 . + 0 ID=cds-WP_000339065.1;Parent=gene-AB69_RS11025;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AB69_RS11025;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 251159 252481 . + . ID=gene-AB69_RS11020;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AB69_RS11020;old_locus_tag=AB69_2403 NZ_JHDO01000087.1 Protein Homology CDS 251159 252481 . + 0 ID=cds-WP_000580275.1;Parent=gene-AB69_RS11020;Dbxref=GenBank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AB69_RS11020;product=TIGR00366 family protein;protein_id=WP_000580275.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 252512 253696 . + . ID=gene-AB69_RS11015;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AB69_RS11015;old_locus_tag=AB69_2404 NZ_JHDO01000087.1 Protein Homology CDS 252512 253696 . + 0 ID=cds-WP_000786547.1;Parent=gene-AB69_RS11015;Dbxref=GenBank:WP_000786547.1;Name=WP_000786547.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AB69_RS11015;product=acetyl-CoA acetyltransferase;protein_id=WP_000786547.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 253770 254546 . - . ID=gene-AB69_RS11010;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AB69_RS11010;old_locus_tag=AB69_2405 NZ_JHDO01000087.1 Protein Homology CDS 253770 254546 . - 0 ID=cds-WP_001225852.1;Parent=gene-AB69_RS11010;Dbxref=GenBank:WP_001225852.1;Name=WP_001225852.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AB69_RS11010;product=YfaP family protein;protein_id=WP_001225852.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 254551 255348 . - . ID=gene-AB69_RS11005;Name=AB69_RS11005;end_range=255348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS11005;old_locus_tag=AB69_2406;partial=true;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 254551 255348 . - 0 ID=cds-AB69_RS11005;Parent=gene-AB69_RS11005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=255348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AB69_RS11005;partial=true;product=DUF2300 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 255339 255773 . - . ID=gene-AB69_RS11000;Name=AB69_RS11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS11000;old_locus_tag=AB69_2407;partial=true;pseudo=true;start_range=.,255339 NZ_JHDO01000087.1 Protein Homology CDS 255339 255773 . - 0 ID=cds-AB69_RS11000;Parent=gene-AB69_RS11000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AB69_RS11000;partial=true;product=DUF1175 family protein;pseudo=true;start_range=.,255339;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 255770 257458 . - . ID=gene-AB69_RS10995;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AB69_RS10995;old_locus_tag=AB69_2408 NZ_JHDO01000087.1 Protein Homology CDS 255770 257458 . - 0 ID=cds-WP_000012305.1;Parent=gene-AB69_RS10995;Dbxref=GenBank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AB69_RS10995;product=DUF2138 domain-containing protein;protein_id=WP_000012305.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 257607 260234 . - . ID=gene-AB69_RS10990;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AB69_RS10990;old_locus_tag=AB69_2409 NZ_JHDO01000087.1 Protein Homology CDS 257607 260234 . - 0 ID=cds-WP_001281242.1;Parent=gene-AB69_RS10990;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AB69_RS10990;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 260381 261103 . + . ID=gene-AB69_RS10985;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AB69_RS10985;old_locus_tag=AB69_2410 NZ_JHDO01000087.1 Protein Homology CDS 260381 261103 . + 0 ID=cds-WP_000990765.1;Parent=gene-AB69_RS10985;Dbxref=GenBank:WP_000990765.1;Name=WP_000990765.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AB69_RS10985;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990765.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 261231 264983 . - . ID=gene-AB69_RS10980;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AB69_RS10980;old_locus_tag=AB69_2411 NZ_JHDO01000087.1 Protein Homology CDS 261231 264983 . - 0 ID=cds-WP_001220077.1;Parent=gene-AB69_RS10980;Dbxref=GenBank:WP_001220077.1;Name=WP_001220077.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AB69_RS10980;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_001220077.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 265408 265551 . - . ID=gene-AB69_RS30590;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AB69_RS30590 NZ_JHDO01000087.1 Protein Homology CDS 265408 265551 . - 0 ID=cds-WP_001753443.1;Parent=gene-AB69_RS30590;Dbxref=GenBank:WP_001753443.1;Name=WP_001753443.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AB69_RS30590;product=protein YpaB;protein_id=WP_001753443.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 265679 267964 . + . ID=gene-AB69_RS10975;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AB69_RS10975;old_locus_tag=AB69_2412 NZ_JHDO01000087.1 Protein Homology CDS 265679 267964 . + 0 ID=cds-WP_001075164.1;Parent=gene-AB69_RS10975;Dbxref=GenBank:WP_001075164.1;Name=WP_001075164.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AB69_RS10975;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 268198 269328 . + . ID=gene-AB69_RS10970;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AB69_RS10970;old_locus_tag=AB69_2413 NZ_JHDO01000087.1 Protein Homology CDS 268198 269328 . + 0 ID=cds-WP_000332037.1;Parent=gene-AB69_RS10970;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AB69_RS10970;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 269328 269582 . + . ID=gene-AB69_RS10965;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AB69_RS10965;old_locus_tag=AB69_2414 NZ_JHDO01000087.1 Protein Homology CDS 269328 269582 . + 0 ID=cds-WP_000135040.1;Parent=gene-AB69_RS10965;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AB69_RS10965;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 269636 270286 . - . ID=gene-AB69_RS10960;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AB69_RS10960;old_locus_tag=AB69_2415 NZ_JHDO01000087.1 Protein Homology CDS 269636 270286 . - 0 ID=cds-WP_000301050.1;Parent=gene-AB69_RS10960;Dbxref=GenBank:WP_000301050.1;Name=WP_000301050.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AB69_RS10960;product=lipopolysaccharide kinase InaA;protein_id=WP_000301050.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 270366 270470 . - . ID=gene-AB69_RS30360;Name=AB69_RS30360;end_range=270470,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30360;partial=true;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 270366 270470 . - 0 ID=cds-AB69_RS30360;Parent=gene-AB69_RS30360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=270470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AB69_RS30360;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 270465 270707 . + . ID=gene-AB69_RS10955;Name=AB69_RS10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10955;old_locus_tag=AB69_2416;partial=true;pseudo=true;start_range=.,270465 NZ_JHDO01000087.1 Protein Homology CDS 270465 270707 . + 0 ID=cds-AB69_RS10955;Parent=gene-AB69_RS10955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AB69_RS10955;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,270465;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 270749 271825 . - . ID=gene-AB69_RS10950;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AB69_RS10950;old_locus_tag=AB69_2417 NZ_JHDO01000087.1 Protein Homology CDS 270749 271825 . - 0 ID=cds-WP_000779105.1;Parent=gene-AB69_RS10950;Dbxref=GenBank:WP_000779105.1;Name=WP_000779105.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416742.1;locus_tag=AB69_RS10950;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779105.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 271830 273188 . - . ID=gene-AB69_RS10945;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AB69_RS10945;old_locus_tag=AB69_2418 NZ_JHDO01000087.1 Protein Homology CDS 271830 273188 . - 0 ID=cds-WP_000948731.1;Parent=gene-AB69_RS10945;Dbxref=GenBank:WP_000948731.1;Name=WP_000948731.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AB69_RS10945;product=glycerol-3-phosphate transporter;protein_id=WP_000948731.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 273461 275089 . + . ID=gene-AB69_RS10940;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AB69_RS10940;old_locus_tag=AB69_2420 NZ_JHDO01000087.1 Protein Homology CDS 273461 275089 . + 0 ID=cds-WP_000857257.1;Parent=gene-AB69_RS10940;Dbxref=GenBank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AB69_RS10940;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 275079 276338 . + . ID=gene-AB69_RS10935;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AB69_RS10935;old_locus_tag=AB69_2421 NZ_JHDO01000087.1 Protein Homology CDS 275079 276338 . + 0 ID=cds-WP_001209927.1;Parent=gene-AB69_RS10935;Dbxref=GenBank:WP_001209927.1;Name=WP_001209927.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AB69_RS10935;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209927.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 276335 277525 . + . ID=gene-AB69_RS10930;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AB69_RS10930;old_locus_tag=AB69_2422 NZ_JHDO01000087.1 Protein Homology CDS 276335 277525 . + 0 ID=cds-WP_001000379.1;Parent=gene-AB69_RS10930;Dbxref=GenBank:WP_001000379.1;Name=WP_001000379.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AB69_RS10930;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000379.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 277718 278617 . + . ID=gene-AB69_RS10925;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AB69_RS10925;old_locus_tag=AB69_2424 NZ_JHDO01000087.1 Protein Homology CDS 277718 278617 . + 0 ID=cds-WP_000140569.1;Parent=gene-AB69_RS10925;Dbxref=GenBank:WP_000140569.1;Name=WP_000140569.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AB69_RS10925;product=ISNCY family transposase;protein_id=WP_000140569.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 278630 278815 . + . ID=gene-AB69_RS10920;Name=AB69_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10920;old_locus_tag=AB69_2425 NZ_JHDO01000087.1 GeneMarkS-2+ CDS 278630 278815 . + 0 ID=cds-WP_000150333.1;Parent=gene-AB69_RS10920;Dbxref=GenBank:WP_000150333.1;Name=WP_000150333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS10920;product=hypothetical protein;protein_id=WP_000150333.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 278856 279659 . - . ID=gene-AB69_RS10915;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AB69_RS10915;old_locus_tag=AB69_2426 NZ_JHDO01000087.1 Protein Homology CDS 278856 279659 . - 0 ID=cds-WP_000992954.1;Parent=gene-AB69_RS10915;Dbxref=GenBank:WP_000992954.1;Name=WP_000992954.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AB69_RS10915;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 279677 280966 . - . ID=gene-AB69_RS10910;Name=yfaV;gbkey=Gene;gene=yfaV;gene_biotype=protein_coding;locus_tag=AB69_RS10910;old_locus_tag=AB69_2427 NZ_JHDO01000087.1 Protein Homology CDS 279677 280966 . - 0 ID=cds-WP_001295288.1;Parent=gene-AB69_RS10910;Dbxref=GenBank:WP_001295288.1;Name=WP_001295288.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfaV;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AB69_RS10910;product=MFS transporter;protein_id=WP_001295288.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 281023 282228 . - . ID=gene-AB69_RS10905;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AB69_RS10905;old_locus_tag=AB69_2428 NZ_JHDO01000087.1 Protein Homology CDS 281023 282228 . - 0 ID=cds-WP_001319848.1;Parent=gene-AB69_RS10905;Dbxref=GenBank:WP_001319848.1;Name=WP_001319848.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AB69_RS10905;product=L-rhamnonate dehydratase;protein_id=WP_001319848.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 282243 283025 . - . ID=gene-AB69_RS10900;Name=yfaX;gbkey=Gene;gene=yfaX;gene_biotype=protein_coding;locus_tag=AB69_RS10900;old_locus_tag=AB69_2429 NZ_JHDO01000087.1 Protein Homology CDS 282243 283025 . - 0 ID=cds-WP_000894185.1;Parent=gene-AB69_RS10900;Dbxref=GenBank:WP_000894185.1;Name=WP_000894185.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfaX;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AB69_RS10900;product=IclR family transcriptional regulator;protein_id=WP_000894185.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 283245 284447 . - . ID=gene-AB69_RS10895;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AB69_RS10895;old_locus_tag=AB69_2430 NZ_JHDO01000087.1 Protein Homology CDS 283245 284447 . - 0 ID=cds-WP_000921621.1;Parent=gene-AB69_RS10895;Dbxref=GenBank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AB69_RS10895;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921621.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 284547 285089 . - . ID=gene-AB69_RS10890;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AB69_RS10890;old_locus_tag=AB69_2431 NZ_JHDO01000087.1 Protein Homology CDS 284547 285089 . - 0 ID=cds-WP_001300392.1;Parent=gene-AB69_RS10890;Dbxref=GenBank:WP_001300392.1;Name=WP_001300392.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416753.4;locus_tag=AB69_RS10890;product=YfaZ family protein;protein_id=WP_001300392.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 285368 285793 . + . ID=gene-AB69_RS10885;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AB69_RS10885;old_locus_tag=AB69_2432 NZ_JHDO01000087.1 Protein Homology CDS 285368 285793 . + 0 ID=cds-WP_001300564.1;Parent=gene-AB69_RS10885;Dbxref=GenBank:WP_001300564.1;Name=WP_001300564.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416754.1;locus_tag=AB69_RS10885;product=nucleoside triphosphatase NudI;protein_id=WP_001300564.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 285832 286434 . - . ID=gene-AB69_RS10880;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AB69_RS10880;old_locus_tag=AB69_2433 NZ_JHDO01000087.1 Protein Homology CDS 285832 286434 . - 0 ID=cds-WP_000879112.1;Parent=gene-AB69_RS10880;Dbxref=GenBank:WP_000879112.1;Name=WP_000879112.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416755.1;locus_tag=AB69_RS10880;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_000879112.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 286742 287881 . + . ID=gene-AB69_RS10875;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AB69_RS10875;old_locus_tag=AB69_2434 NZ_JHDO01000087.1 Protein Homology CDS 286742 287881 . + 0 ID=cds-WP_001295286.1;Parent=gene-AB69_RS10875;Dbxref=GenBank:WP_001295286.1;Name=WP_001295286.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AB69_RS10875;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001295286.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 287885 288853 . + . ID=gene-AB69_RS10870;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AB69_RS10870;old_locus_tag=AB69_2435 NZ_JHDO01000087.1 Protein Homology CDS 287885 288853 . + 0 ID=cds-WP_000461657.1;Parent=gene-AB69_RS10870;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AB69_RS10870;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 288853 290835 . + . ID=gene-AB69_RS10865;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AB69_RS10865;old_locus_tag=AB69_2436 NZ_JHDO01000087.1 Protein Homology CDS 288853 290835 . + 0 ID=cds-WP_000860273.1;Parent=gene-AB69_RS10865;Dbxref=GenBank:WP_000860273.1;Name=WP_000860273.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AB69_RS10865;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000860273.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 290832 291722 . + . ID=gene-AB69_RS10860;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AB69_RS10860;old_locus_tag=AB69_2437 NZ_JHDO01000087.1 Protein Homology CDS 290832 291722 . + 0 ID=cds-WP_000169728.1;Parent=gene-AB69_RS10860;Dbxref=GenBank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AB69_RS10860;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 291722 293374 . + . ID=gene-AB69_RS10855;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AB69_RS10855;old_locus_tag=AB69_2438 NZ_JHDO01000087.1 Protein Homology CDS 291722 293374 . + 0 ID=cds-WP_000844057.1;Parent=gene-AB69_RS10855;Dbxref=GenBank:WP_000844057.1;Name=WP_000844057.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AB69_RS10855;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844057.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 293371 293706 . + . ID=gene-AB69_RS10850;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AB69_RS10850;old_locus_tag=AB69_2439 NZ_JHDO01000087.1 Protein Homology CDS 293371 293706 . + 0 ID=cds-WP_032231349.1;Parent=gene-AB69_RS10850;Dbxref=GenBank:WP_032231349.1;Name=WP_032231349.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AB69_RS10850;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_032231349.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 293706 294092 . + . ID=gene-AB69_RS10845;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AB69_RS10845;old_locus_tag=AB69_2440 NZ_JHDO01000087.1 Protein Homology CDS 293706 294092 . + 0 ID=cds-WP_000523880.1;Parent=gene-AB69_RS10845;Dbxref=GenBank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AB69_RS10845;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 294086 294352 . - . ID=gene-AB69_RS10840;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AB69_RS10840;old_locus_tag=AB69_2441 NZ_JHDO01000087.1 Protein Homology CDS 294086 294352 . - 0 ID=cds-WP_001295285.1;Parent=gene-AB69_RS10840;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AB69_RS10840;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 294462 295817 . - . ID=gene-AB69_RS10835;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AB69_RS10835;old_locus_tag=AB69_2442 NZ_JHDO01000087.1 Protein Homology CDS 294462 295817 . - 0 ID=cds-WP_000577625.1;Parent=gene-AB69_RS10835;Dbxref=GenBank:WP_000577625.1;Name=WP_000577625.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AB69_RS10835;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 295814 296776 . - . ID=gene-AB69_RS10830;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AB69_RS10830;old_locus_tag=AB69_2443 NZ_JHDO01000087.1 Protein Homology CDS 295814 296776 . - 0 ID=cds-WP_001255628.1;Parent=gene-AB69_RS10830;Dbxref=GenBank:WP_001255628.1;Name=WP_001255628.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416764.1;locus_tag=AB69_RS10830;product=o-succinylbenzoate synthase;protein_id=WP_001255628.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 296776 297633 . - . ID=gene-AB69_RS10825;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AB69_RS10825;old_locus_tag=AB69_2444 NZ_JHDO01000087.1 Protein Homology CDS 296776 297633 . - 0 ID=cds-WP_000639996.1;Parent=gene-AB69_RS10825;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AB69_RS10825;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 297648 298406 . - . ID=gene-AB69_RS10820;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AB69_RS10820;old_locus_tag=AB69_2445 NZ_JHDO01000087.1 Protein Homology CDS 297648 298406 . - 0 ID=cds-WP_032231350.1;Parent=gene-AB69_RS10820;Dbxref=GenBank:WP_032231350.1;Name=WP_032231350.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AB69_RS10820;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_032231350.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 298403 300073 . - . ID=gene-AB69_RS10815;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AB69_RS10815;old_locus_tag=AB69_2446 NZ_JHDO01000087.1 Protein Homology CDS 298403 300073 . - 0 ID=cds-WP_001295284.1;Parent=gene-AB69_RS10815;Dbxref=GenBank:WP_001295284.1;Name=WP_001295284.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AB69_RS10815;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001295284.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 300162 301457 . - . ID=gene-AB69_RS10810;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AB69_RS10810;old_locus_tag=AB69_2447 NZ_JHDO01000087.1 Protein Homology CDS 300162 301457 . - 0 ID=cds-WP_001191419.1;Parent=gene-AB69_RS10810;Dbxref=GenBank:WP_001191419.1;Name=WP_001191419.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=AB69_RS10810;product=isochorismate synthase MenF;protein_id=WP_001191419.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 301536 301841 . - . ID=gene-AB69_RS10805;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AB69_RS10805;old_locus_tag=AB69_2448 NZ_JHDO01000087.1 Protein Homology CDS 301536 301841 . - 0 ID=cds-WP_000070621.1;Parent=gene-AB69_RS10805;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AB69_RS10805;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 301896 302357 . - . ID=gene-AB69_RS10800;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AB69_RS10800;old_locus_tag=AB69_2449 NZ_JHDO01000087.1 Protein Homology CDS 301896 302357 . - 0 ID=cds-WP_000574091.1;Parent=gene-AB69_RS10800;Dbxref=GenBank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=AB69_RS10800;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 302422 303339 . + . ID=gene-AB69_RS10795;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AB69_RS10795;old_locus_tag=AB69_2450 NZ_JHDO01000087.1 Protein Homology CDS 302422 303339 . + 0 ID=cds-WP_001300687.1;Parent=gene-AB69_RS10795;Dbxref=GenBank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AB69_RS10795;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 303527 304739 . + . ID=gene-AB69_RS0124650;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=AB69_RS0124650;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 303527 304739 . + 0 ID=cds-AB69_RS0124650;Parent=gene-AB69_RS0124650;Note=frameshifted;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AB69_RS0124650;product=deubiquitinase ElaD;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 304810 306537 . - . ID=gene-AB69_RS10790;Name=yfbK;gbkey=Gene;gene=yfbK;gene_biotype=protein_coding;locus_tag=AB69_RS10790;old_locus_tag=AB69_2454 NZ_JHDO01000087.1 Protein Homology CDS 304810 306537 . - 0 ID=cds-WP_001244806.1;Parent=gene-AB69_RS10790;Dbxref=GenBank:WP_001244806.1;Name=WP_001244806.1;gbkey=CDS;gene=yfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416773.1;locus_tag=AB69_RS10790;product=vWA domain-containing protein;protein_id=WP_001244806.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 306675 307646 . + . ID=gene-AB69_RS10785;Name=yfbL;gbkey=Gene;gene=yfbL;gene_biotype=protein_coding;locus_tag=AB69_RS10785;old_locus_tag=AB69_2455 NZ_JHDO01000087.1 Protein Homology CDS 306675 307646 . + 0 ID=cds-WP_000719999.1;Parent=gene-AB69_RS10785;Dbxref=GenBank:WP_000719999.1;Name=WP_000719999.1;gbkey=CDS;gene=yfbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=AB69_RS10785;product=M28 family metallopeptidase;protein_id=WP_000719999.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 307749 308252 . + . ID=gene-AB69_RS10780;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AB69_RS10780;old_locus_tag=AB69_2456 NZ_JHDO01000087.1 Protein Homology CDS 307749 308252 . + 0 ID=cds-WP_000525360.1;Parent=gene-AB69_RS10780;Dbxref=GenBank:WP_000525360.1;Name=WP_000525360.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416775.1;locus_tag=AB69_RS10780;product=YfbM family protein;protein_id=WP_000525360.1;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 308525 309241 . - . ID=gene-AB69_RS10775;Name=yfbN;gbkey=Gene;gene=yfbN;gene_biotype=protein_coding;locus_tag=AB69_RS10775;old_locus_tag=AB69_2457 NZ_JHDO01000087.1 Protein Homology CDS 308525 309241 . - 0 ID=cds-WP_000455114.1;Parent=gene-AB69_RS10775;Dbxref=GenBank:WP_000455114.1;Name=WP_000455114.1;gbkey=CDS;gene=yfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416776.1;locus_tag=AB69_RS10775;product=protein YfbN;protein_id=WP_000455114.1;transl_table=11 NZ_JHDO01000087.1 RefSeq pseudogene 309423 309521 . + . ID=gene-AB69_RS30365;Name=AB69_RS30365;end_range=309521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30365;old_locus_tag=AB69_2458;partial=true;pseudo=true NZ_JHDO01000087.1 Protein Homology CDS 309423 309521 . + 0 ID=cds-AB69_RS30365;Parent=gene-AB69_RS30365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=309521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486642.1;locus_tag=AB69_RS30365;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000087.1 RefSeq gene 309538 310235 . - . ID=gene-AB69_RS10770;Name=AB69_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10770;old_locus_tag=AB69_2459 NZ_JHDO01000087.1 Protein Homology CDS 309986 310235 . - 0 ID=cds-WP_103215986.1;Parent=gene-AB69_RS10770;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10770;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 NZ_JHDO01000087.1 Protein Homology CDS 309538 309986 . - 2 ID=cds-WP_103215986.1;Parent=gene-AB69_RS10770;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10770;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 ##sequence-region NZ_JHDO01000088.1 1 133891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000088.1 RefSeq region 1 133891 . + . ID=NZ_JHDO01000088.1:1..133891;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000088.1 RefSeq pseudogene 1 123 . - . ID=gene-AB69_RS10765;Name=AB69_RS10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10765;old_locus_tag=AB69_2460;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000088.1 Protein Homology CDS 1 123 . - 0 ID=cds-AB69_RS10765;Parent=gene-AB69_RS10765;Note=responsible for the influx of magnesium ions%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AB69_RS10765;partial=true;product=magnesium transporter CorA;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 275 331 . - . ID=gene-AB69_RS30370;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AB69_RS30370 NZ_JHDO01000088.1 Protein Homology CDS 275 331 . - 0 ID=cds-WP_211180520.1;Parent=gene-AB69_RS30370;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AB69_RS30370;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 493 789 . + . ID=gene-AB69_RS10755;Name=AB69_RS10755;end_range=789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10755;old_locus_tag=AB69_2462;partial=true;pseudo=true NZ_JHDO01000088.1 Protein Homology CDS 493 789 . + 0 ID=cds-AB69_RS10755;Parent=gene-AB69_RS10755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AB69_RS10755;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 836 1533 . + . ID=gene-AB69_RS10750;Name=AB69_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10750;old_locus_tag=AB69_2463 NZ_JHDO01000088.1 Protein Homology CDS 836 1085 . + 0 ID=cds-WP_248785138.1;Parent=gene-AB69_RS10750;Dbxref=GenBank:WP_248785138.1;Name=WP_248785138.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10750;product=IS1-like element IS1A family transposase;protein_id=WP_248785138.1;transl_table=11 NZ_JHDO01000088.1 Protein Homology CDS 1085 1533 . + 2 ID=cds-WP_248785138.1;Parent=gene-AB69_RS10750;Dbxref=GenBank:WP_248785138.1;Name=WP_248785138.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10750;product=IS1-like element IS1A family transposase;protein_id=WP_248785138.1;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 1551 1907 . + . ID=gene-AB69_RS0124665;Name=yfbO;gbkey=Gene;gene=yfbO;gene_biotype=pseudogene;locus_tag=AB69_RS0124665;old_locus_tag=AB69_2464;partial=true;pseudo=true;start_range=.,1551 NZ_JHDO01000088.1 Protein Homology CDS 1551 1907 . + 0 ID=cds-AB69_RS0124665;Parent=gene-AB69_RS0124665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yfbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416777.2;locus_tag=AB69_RS0124665;partial=true;product=protein YfbO;pseudo=true;start_range=.,1551;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 1966 2814 . + . ID=gene-AB69_RS10745;Name=yfbP;gbkey=Gene;gene=yfbP;gene_biotype=protein_coding;locus_tag=AB69_RS10745;old_locus_tag=AB69_2465 NZ_JHDO01000088.1 Protein Homology CDS 1966 2814 . + 0 ID=cds-WP_000767280.1;Parent=gene-AB69_RS10745;Dbxref=GenBank:WP_000767280.1;Name=WP_000767280.1;gbkey=CDS;gene=yfbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416778.2;locus_tag=AB69_RS10745;product=tetratricopeptide repeat protein YfbP;protein_id=WP_000767280.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 2898 4355 . - . ID=gene-AB69_RS10740;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AB69_RS10740;old_locus_tag=AB69_2466 NZ_JHDO01000088.1 Protein Homology CDS 2898 4355 . - 0 ID=cds-WP_000156701.1;Parent=gene-AB69_RS10740;Dbxref=GenBank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AB69_RS10740;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 4362 5891 . - . ID=gene-AB69_RS10735;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AB69_RS10735;old_locus_tag=AB69_2467 NZ_JHDO01000088.1 Protein Homology CDS 4362 5891 . - 0 ID=cds-WP_000926441.1;Parent=gene-AB69_RS10735;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AB69_RS10735;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 6055 7896 . - . ID=gene-AB69_RS10730;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AB69_RS10730;old_locus_tag=AB69_2468 NZ_JHDO01000088.1 Protein Homology CDS 6055 7896 . - 0 ID=cds-WP_001056643.1;Parent=gene-AB69_RS10730;Dbxref=GenBank:WP_001056643.1;Name=WP_001056643.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AB69_RS10730;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056643.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 7893 8195 . - . ID=gene-AB69_RS10725;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AB69_RS10725;old_locus_tag=AB69_2469 NZ_JHDO01000088.1 Protein Homology CDS 7893 8195 . - 0 ID=cds-WP_000612644.1;Parent=gene-AB69_RS10725;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AB69_RS10725;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 8192 8746 . - . ID=gene-AB69_RS10720;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AB69_RS10720;old_locus_tag=AB69_2470 NZ_JHDO01000088.1 Protein Homology CDS 8192 8746 . - 0 ID=cds-WP_000393511.1;Parent=gene-AB69_RS10720;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AB69_RS10720;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 8758 9300 . - . ID=gene-AB69_RS10715;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AB69_RS10715;old_locus_tag=AB69_2471 NZ_JHDO01000088.1 Protein Homology CDS 8758 9300 . - 0 ID=cds-WP_000172749.1;Parent=gene-AB69_RS10715;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AB69_RS10715;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 9315 10292 . - . ID=gene-AB69_RS10710;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AB69_RS10710;old_locus_tag=AB69_2472 NZ_JHDO01000088.1 Protein Homology CDS 9315 10292 . - 0 ID=cds-WP_000118507.1;Parent=gene-AB69_RS10710;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AB69_RS10710;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 10289 13015 . - . ID=gene-AB69_RS10705;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AB69_RS10705;old_locus_tag=AB69_2473 NZ_JHDO01000088.1 Protein Homology CDS 10289 13015 . - 0 ID=cds-WP_000190939.1;Parent=gene-AB69_RS10705;Dbxref=GenBank:WP_000190939.1;Name=WP_000190939.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AB69_RS10705;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_000190939.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 13068 14405 . - . ID=gene-AB69_RS10700;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AB69_RS10700;old_locus_tag=AB69_2474 NZ_JHDO01000088.1 Protein Homology CDS 13068 14405 . - 0 ID=cds-WP_000789500.1;Parent=gene-AB69_RS10700;Dbxref=GenBank:WP_000789500.1;Name=WP_000789500.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416787.1;locus_tag=AB69_RS10700;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789500.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 14402 14902 . - . ID=gene-AB69_RS10695;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AB69_RS10695;old_locus_tag=AB69_2475 NZ_JHDO01000088.1 Protein Homology CDS 14402 14902 . - 0 ID=cds-WP_000545042.1;Parent=gene-AB69_RS10695;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AB69_RS10695;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 14905 16707 . - . ID=gene-AB69_RS10690;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AB69_RS10690;old_locus_tag=AB69_2476 NZ_JHDO01000088.1 Protein Homology CDS 14905 16707 . - 0 ID=cds-WP_000247879.1;Parent=gene-AB69_RS10690;Dbxref=GenBank:WP_000247879.1;Name=WP_000247879.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AB69_RS10690;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247879.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 16801 17463 . - . ID=gene-AB69_RS10685;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AB69_RS10685;old_locus_tag=AB69_2478 NZ_JHDO01000088.1 Protein Homology CDS 16801 17463 . - 0 ID=cds-WP_000386733.1;Parent=gene-AB69_RS10685;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AB69_RS10685;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 17479 17922 . - . ID=gene-AB69_RS10680;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AB69_RS10680;old_locus_tag=AB69_2479 NZ_JHDO01000088.1 Protein Homology CDS 17479 17922 . - 0 ID=cds-WP_000062997.1;Parent=gene-AB69_RS10680;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AB69_RS10680;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 18553 19491 . - . ID=gene-AB69_RS10675;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AB69_RS10675;old_locus_tag=AB69_2481 NZ_JHDO01000088.1 Protein Homology CDS 18553 19491 . - 0 ID=cds-WP_000622280.1;Parent=gene-AB69_RS10675;Dbxref=GenBank:WP_000622280.1;Name=WP_000622280.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416792.1;locus_tag=AB69_RS10675;product=transcriptional regulator LrhA;protein_id=WP_000622280.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 20411 21628 . + . ID=gene-AB69_RS10670;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AB69_RS10670;old_locus_tag=AB69_2482 NZ_JHDO01000088.1 Protein Homology CDS 20411 21628 . + 0 ID=cds-WP_000074527.1;Parent=gene-AB69_RS10670;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AB69_RS10670;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 21712 22311 . + . ID=gene-AB69_RS10665;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AB69_RS10665;old_locus_tag=AB69_2483 NZ_JHDO01000088.1 Protein Homology CDS 21712 22311 . + 0 ID=cds-WP_032231228.1;Parent=gene-AB69_RS10665;Dbxref=GenBank:WP_032231228.1;Name=WP_032231228.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416794.1;locus_tag=AB69_RS10665;product=5'-deoxynucleotidase;protein_id=WP_032231228.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 22370 24202 . - . ID=gene-AB69_RS10660;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AB69_RS10660;old_locus_tag=AB69_2484 NZ_JHDO01000088.1 Protein Homology CDS 22370 24202 . - 0 ID=cds-WP_001012899.1;Parent=gene-AB69_RS10660;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AB69_RS10660;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 24289 24939 . - . ID=gene-AB69_RS10655;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AB69_RS10655;old_locus_tag=AB69_2485 NZ_JHDO01000088.1 Protein Homology CDS 24289 24939 . - 0 ID=cds-WP_001203392.1;Parent=gene-AB69_RS10655;Dbxref=GenBank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AB69_RS10655;product=hexitol phosphatase HxpA;protein_id=WP_001203392.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 24950 25444 . - . ID=gene-AB69_RS10650;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AB69_RS10650;old_locus_tag=AB69_2486 NZ_JHDO01000088.1 Protein Homology CDS 24950 25444 . - 0 ID=cds-WP_000426124.1;Parent=gene-AB69_RS10650;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AB69_RS10650;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 25527 25982 . - . ID=gene-AB69_RS10645;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AB69_RS10645;old_locus_tag=AB69_2487 NZ_JHDO01000088.1 Protein Homology CDS 25527 25982 . - 0 ID=cds-WP_000106627.1;Parent=gene-AB69_RS10645;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AB69_RS10645;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 26320 27522 . + . ID=gene-AB69_RS10635;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AB69_RS10635;old_locus_tag=AB69_2489 NZ_JHDO01000088.1 Protein Homology CDS 26320 27522 . + 0 ID=cds-WP_000095707.1;Parent=gene-AB69_RS10635;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AB69_RS10635;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 27597 29741 . + . ID=gene-AB69_RS10630;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AB69_RS10630;old_locus_tag=AB69_2490 NZ_JHDO01000088.1 Protein Homology CDS 27597 29741 . + 0 ID=cds-WP_000086722.1;Parent=gene-AB69_RS10630;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AB69_RS10630;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 29931 31451 . + . ID=gene-AB69_RS10625;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AB69_RS10625;old_locus_tag=AB69_2491 NZ_JHDO01000088.1 Protein Homology CDS 29931 31451 . + 0 ID=cds-WP_001274493.1;Parent=gene-AB69_RS10625;Dbxref=GenBank:WP_001274493.1;Name=WP_001274493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AB69_RS10625;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274493.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 31484 32026 . - . ID=gene-AB69_RS10620;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AB69_RS10620;old_locus_tag=AB69_2492 NZ_JHDO01000088.1 Protein Homology CDS 31484 32026 . - 0 ID=cds-WP_000437935.1;Parent=gene-AB69_RS10620;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AB69_RS10620;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 32084 32635 . - . ID=gene-AB69_RS10615;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AB69_RS10615;old_locus_tag=AB69_2493 NZ_JHDO01000088.1 Protein Homology CDS 32084 32635 . - 0 ID=cds-WP_000772452.1;Parent=gene-AB69_RS10615;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AB69_RS10615;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 32691 33335 . - . ID=gene-AB69_RS10610;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AB69_RS10610;old_locus_tag=AB69_2494 NZ_JHDO01000088.1 Protein Homology CDS 32691 33335 . - 0 ID=cds-WP_000042442.1;Parent=gene-AB69_RS10610;Dbxref=GenBank:WP_000042442.1;Name=WP_000042442.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AB69_RS10610;product=glutathione transferase;protein_id=WP_000042442.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 33471 34118 . + . ID=gene-AB69_RS10605;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AB69_RS10605;old_locus_tag=AB69_2495 NZ_JHDO01000088.1 Protein Homology CDS 33471 34118 . + 0 ID=cds-WP_000566471.1;Parent=gene-AB69_RS10605;Dbxref=GenBank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AB69_RS10605;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 34175 34537 . + . ID=gene-AB69_RS10600;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AB69_RS10600;old_locus_tag=AB69_2496 NZ_JHDO01000088.1 Protein Homology CDS 34175 34537 . + 0 ID=cds-WP_000068457.1;Parent=gene-AB69_RS10600;Dbxref=GenBank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AB69_RS10600;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 34558 35451 . + . ID=gene-AB69_RS10595;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AB69_RS10595;old_locus_tag=AB69_2497 NZ_JHDO01000088.1 Protein Homology CDS 34558 35451 . + 0 ID=cds-WP_032231229.1;Parent=gene-AB69_RS10595;Dbxref=GenBank:WP_032231229.1;Name=WP_032231229.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AB69_RS10595;product=TIGR01777 family oxidoreductase;protein_id=WP_032231229.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 35499 36389 . - . ID=gene-AB69_RS10590;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AB69_RS10590;old_locus_tag=AB69_2498 NZ_JHDO01000088.1 Protein Homology CDS 35499 36389 . - 0 ID=cds-WP_000156149.1;Parent=gene-AB69_RS10590;Dbxref=GenBank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AB69_RS10590;product=recombination-promoting nuclease RpnB;protein_id=WP_000156149.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 36586 37359 . - . ID=gene-AB69_RS10585;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AB69_RS10585;old_locus_tag=AB69_2499 NZ_JHDO01000088.1 Protein Homology CDS 36586 37359 . - 0 ID=cds-WP_001293613.1;Parent=gene-AB69_RS10585;Dbxref=GenBank:WP_001293613.1;Name=WP_001293613.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416809.1;locus_tag=AB69_RS10585;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293613.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 37367 38083 . - . ID=gene-AB69_RS10580;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AB69_RS10580;old_locus_tag=AB69_2500 NZ_JHDO01000088.1 Protein Homology CDS 37367 38083 . - 0 ID=cds-WP_000569958.1;Parent=gene-AB69_RS10580;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AB69_RS10580;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 38080 38766 . - . ID=gene-AB69_RS10575;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AB69_RS10575;old_locus_tag=AB69_2501 NZ_JHDO01000088.1 Protein Homology CDS 38080 38766 . - 0 ID=cds-WP_000965522.1;Parent=gene-AB69_RS10575;Dbxref=GenBank:WP_000965522.1;Name=WP_000965522.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AB69_RS10575;product=histidine ABC transporter permease HisQ;protein_id=WP_000965522.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 38856 39638 . - . ID=gene-AB69_RS10570;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AB69_RS10570;old_locus_tag=AB69_2502 NZ_JHDO01000088.1 Protein Homology CDS 38856 39638 . - 0 ID=cds-WP_000737621.1;Parent=gene-AB69_RS10570;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AB69_RS10570;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 39859 40641 . - . ID=gene-AB69_RS10565;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AB69_RS10565;old_locus_tag=AB69_2503 NZ_JHDO01000088.1 Protein Homology CDS 39859 40641 . - 0 ID=cds-WP_000748271.1;Parent=gene-AB69_RS10565;Dbxref=GenBank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AB69_RS10565;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 40907 41476 . - . ID=gene-AB69_RS10560;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AB69_RS10560;old_locus_tag=AB69_2504 NZ_JHDO01000088.1 Protein Homology CDS 40907 41476 . - 0 ID=cds-WP_000825700.1;Parent=gene-AB69_RS10560;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AB69_RS10560;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 41571 43088 . - . ID=gene-AB69_RS10555;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AB69_RS10555;old_locus_tag=AB69_2505 NZ_JHDO01000088.1 Protein Homology CDS 41571 43088 . - 0 ID=cds-WP_000334220.1;Parent=gene-AB69_RS10555;Dbxref=GenBank:WP_000334220.1;Name=WP_000334220.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AB69_RS10555;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 43125 43613 . - . ID=gene-AB69_RS10550;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AB69_RS10550;old_locus_tag=AB69_2506 NZ_JHDO01000088.1 Protein Homology CDS 43125 43613 . - 0 ID=cds-WP_000262113.1;Parent=gene-AB69_RS10550;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AB69_RS10550;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 43872 44534 . - . ID=gene-AB69_RS10545;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AB69_RS10545;old_locus_tag=AB69_2507 NZ_JHDO01000088.1 Protein Homology CDS 43872 44534 . - 0 ID=cds-WP_000146992.1;Parent=gene-AB69_RS10545;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AB69_RS10545;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 44524 45792 . - . ID=gene-AB69_RS10540;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AB69_RS10540;old_locus_tag=AB69_2508 NZ_JHDO01000088.1 Protein Homology CDS 44524 45792 . - 0 ID=cds-WP_000584546.1;Parent=gene-AB69_RS10540;Dbxref=GenBank:WP_000584546.1;Name=WP_000584546.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AB69_RS10540;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584546.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 45862 46776 . - . ID=gene-AB69_RS10535;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AB69_RS10535;old_locus_tag=AB69_2509 NZ_JHDO01000088.1 Protein Homology CDS 45862 46776 . - 0 ID=cds-WP_000118404.1;Parent=gene-AB69_RS10535;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AB69_RS10535;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 46932 47591 . - . ID=gene-AB69_RS10530;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AB69_RS10530;old_locus_tag=AB69_2510 NZ_JHDO01000088.1 Protein Homology CDS 46932 47591 . - 0 ID=cds-WP_000364335.1;Parent=gene-AB69_RS10530;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AB69_RS10530;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 47674 48486 . - . ID=gene-AB69_RS10525;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AB69_RS10525;old_locus_tag=AB69_2511 NZ_JHDO01000088.1 Protein Homology CDS 47674 48486 . - 0 ID=cds-WP_001283585.1;Parent=gene-AB69_RS10525;Dbxref=GenBank:WP_001283585.1;Name=WP_001283585.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AB69_RS10525;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283585.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 48486 49499 . - . ID=gene-AB69_RS10520;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AB69_RS10520;old_locus_tag=AB69_2512 NZ_JHDO01000088.1 Protein Homology CDS 48486 49499 . - 0 ID=cds-WP_001289167.1;Parent=gene-AB69_RS10520;Dbxref=GenBank:WP_001289167.1;Name=WP_001289167.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AB69_RS10520;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 49565 50701 . - . ID=gene-AB69_RS10515;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AB69_RS10515;old_locus_tag=AB69_2513 NZ_JHDO01000088.1 Protein Homology CDS 49565 50701 . - 0 ID=cds-WP_000699145.1;Parent=gene-AB69_RS10515;Dbxref=GenBank:WP_000699145.1;Name=WP_000699145.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=AB69_RS10515;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699145.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 50800 51795 . + . ID=gene-AB69_RS10510;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AB69_RS10510;old_locus_tag=AB69_2514 NZ_JHDO01000088.1 Protein Homology CDS 50800 51795 . + 0 ID=cds-WP_000615834.1;Parent=gene-AB69_RS10510;Dbxref=GenBank:WP_000615834.1;Name=WP_000615834.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AB69_RS10510;product=flagella biosynthesis regulator Flk;protein_id=WP_000615834.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 51792 52970 . - . ID=gene-AB69_RS10505;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AB69_RS10505;old_locus_tag=AB69_2515 NZ_JHDO01000088.1 Protein Homology CDS 51792 52970 . - 0 ID=cds-WP_000127781.1;Parent=gene-AB69_RS10505;Dbxref=GenBank:WP_000127781.1;Name=WP_000127781.1;gbkey=CDS;gene=yfcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AB69_RS10505;product=MFS transporter;protein_id=WP_000127781.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 53235 54455 . - . ID=gene-AB69_RS10500;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AB69_RS10500;old_locus_tag=AB69_2517 NZ_JHDO01000088.1 Protein Homology CDS 53235 54455 . - 0 ID=cds-WP_000817178.1;Parent=gene-AB69_RS10500;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AB69_RS10500;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 54614 56620 . + . ID=gene-AB69_RS10495;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AB69_RS10495;old_locus_tag=AB69_2518 NZ_JHDO01000088.1 Protein Homology CDS 54614 56620 . + 0 ID=cds-WP_000683799.1;Parent=gene-AB69_RS10495;Dbxref=GenBank:WP_000683799.1;Name=WP_000683799.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AB69_RS10495;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683799.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 56741 57019 . - . ID=gene-AB69_RS10490;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AB69_RS10490;old_locus_tag=AB69_2519 NZ_JHDO01000088.1 Protein Homology CDS 56741 57019 . - 0 ID=cds-WP_000559764.1;Parent=gene-AB69_RS10490;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AB69_RS10490;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 57053 57601 . - . ID=gene-AB69_RS10485;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AB69_RS10485;old_locus_tag=AB69_2520 NZ_JHDO01000088.1 Protein Homology CDS 57053 57601 . - 0 ID=cds-WP_001089241.1;Parent=gene-AB69_RS10485;Dbxref=GenBank:WP_001089241.1;Name=WP_001089241.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AB69_RS10485;product=elongation factor P hydroxylase;protein_id=WP_001089241.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 57601 58410 . - . ID=gene-AB69_RS10480;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AB69_RS10480;old_locus_tag=AB69_2521 NZ_JHDO01000088.1 Protein Homology CDS 57601 58410 . - 0 ID=cds-WP_000447361.1;Parent=gene-AB69_RS10480;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AB69_RS10480;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 58410 59234 . - . ID=gene-AB69_RS10475;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AB69_RS10475;old_locus_tag=AB69_2522 NZ_JHDO01000088.1 Protein Homology CDS 58410 59234 . - 0 ID=cds-WP_001043825.1;Parent=gene-AB69_RS10475;Dbxref=GenBank:WP_001043825.1;Name=WP_001043825.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AB69_RS10475;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 59238 60323 . - . ID=gene-AB69_RS10470;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AB69_RS10470;old_locus_tag=AB69_2523 NZ_JHDO01000088.1 Protein Homology CDS 59238 60323 . - 0 ID=cds-WP_032231230.1;Parent=gene-AB69_RS10470;Dbxref=GenBank:WP_032231230.1;Name=WP_032231230.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AB69_RS10470;product=chorismate synthase;protein_id=WP_032231230.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 60358 61290 . - . ID=gene-AB69_RS10465;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AB69_RS10465;old_locus_tag=AB69_2524 NZ_JHDO01000088.1 Protein Homology CDS 60358 61290 . - 0 ID=cds-WP_001300582.1;Parent=gene-AB69_RS10465;Dbxref=GenBank:WP_001300582.1;Name=WP_001300582.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AB69_RS10465;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 61456 62007 . + . ID=gene-AB69_RS10460;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AB69_RS10460;old_locus_tag=AB69_2525 NZ_JHDO01000088.1 Protein Homology CDS 61456 62007 . + 0 ID=cds-WP_000730806.1;Parent=gene-AB69_RS10460;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AB69_RS10460;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 62079 62936 . - . ID=gene-AB69_RS10455;Name=AB69_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10455;old_locus_tag=AB69_2526 NZ_JHDO01000088.1 Protein Homology CDS 62079 62936 . - 0 ID=cds-WP_000698770.1;Parent=gene-AB69_RS10455;Dbxref=GenBank:WP_000698770.1;Name=WP_000698770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698770.1;locus_tag=AB69_RS10455;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_000698770.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 62938 63477 . - . ID=gene-AB69_RS10450;Name=AB69_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10450;old_locus_tag=AB69_2527 NZ_JHDO01000088.1 Protein Homology CDS 62938 63477 . - 0 ID=cds-WP_000844747.1;Parent=gene-AB69_RS10450;Dbxref=GenBank:WP_000844747.1;Name=WP_000844747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242288.1;locus_tag=AB69_RS10450;product=fimbrial protein;protein_id=WP_000844747.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 63474 63962 . - . ID=gene-AB69_RS10445;Name=AB69_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10445;old_locus_tag=AB69_2528 NZ_JHDO01000088.1 Protein Homology CDS 63474 63962 . - 0 ID=cds-WP_000714137.1;Parent=gene-AB69_RS10445;Dbxref=GenBank:WP_000714137.1;Name=WP_000714137.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AB69_RS10445;product=fimbrial protein;protein_id=WP_000714137.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 63959 64468 . - . ID=gene-AB69_RS10440;Name=AB69_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10440;old_locus_tag=AB69_2529 NZ_JHDO01000088.1 Protein Homology CDS 63959 64468 . - 0 ID=cds-WP_000018448.1;Parent=gene-AB69_RS10440;Dbxref=GenBank:WP_000018448.1;Name=WP_000018448.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733155.1;locus_tag=AB69_RS10440;product=fimbrial protein;protein_id=WP_000018448.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 64484 65236 . - . ID=gene-AB69_RS10435;Name=AB69_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10435;old_locus_tag=AB69_2530 NZ_JHDO01000088.1 Protein Homology CDS 64484 65236 . - 0 ID=cds-WP_001487366.1;Parent=gene-AB69_RS10435;Dbxref=GenBank:WP_001487366.1;Name=WP_001487366.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482750.1;locus_tag=AB69_RS10435;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001487366.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 65256 67901 . - . ID=gene-AB69_RS10430;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AB69_RS10430;old_locus_tag=AB69_2531 NZ_JHDO01000088.1 Protein Homology CDS 65256 67901 . - 0 ID=cds-WP_032231234.1;Parent=gene-AB69_RS10430;Dbxref=GenBank:WP_032231234.1;Name=WP_032231234.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AB69_RS10430;product=fimbrial usher protein YfcU;protein_id=WP_032231234.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 67983 68546 . - . ID=gene-AB69_RS10425;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AB69_RS10425;old_locus_tag=AB69_2532 NZ_JHDO01000088.1 Protein Homology CDS 67983 68546 . - 0 ID=cds-WP_000033316.1;Parent=gene-AB69_RS10425;Dbxref=GenBank:WP_000033316.1;Name=WP_000033316.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AB69_RS10425;product=fimbrial protein;protein_id=WP_000033316.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 69227 69712 . - . ID=gene-AB69_RS10420;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AB69_RS10420;old_locus_tag=AB69_2534 NZ_JHDO01000088.1 Protein Homology CDS 69227 69712 . - 0 ID=cds-WP_001195819.1;Parent=gene-AB69_RS10420;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AB69_RS10420;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 69915 72059 . - . ID=gene-AB69_RS10415;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AB69_RS10415;old_locus_tag=AB69_2535 NZ_JHDO01000088.1 Protein Homology CDS 69915 72059 . - 0 ID=cds-WP_000426176.1;Parent=gene-AB69_RS10415;Dbxref=GenBank:WP_000426176.1;Name=WP_000426176.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416843.1;locus_tag=AB69_RS10415;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426176.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 72059 73369 . - . ID=gene-AB69_RS10410;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AB69_RS10410;old_locus_tag=AB69_2536 NZ_JHDO01000088.1 Protein Homology CDS 72059 73369 . - 0 ID=cds-WP_000531952.1;Parent=gene-AB69_RS10410;Dbxref=GenBank:WP_000531952.1;Name=WP_000531952.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AB69_RS10410;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_000531952.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 73550 73834 . - . ID=gene-AB69_RS10405;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AB69_RS10405;old_locus_tag=AB69_2537 NZ_JHDO01000088.1 Protein Homology CDS 73550 73834 . - 0 ID=cds-WP_001296261.1;Parent=gene-AB69_RS10405;Dbxref=GenBank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AB69_RS10405;product=YfcZ/YiiS family protein;protein_id=WP_001296261.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 74206 75546 . + . ID=gene-AB69_RS10400;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AB69_RS10400;old_locus_tag=AB69_2538 NZ_JHDO01000088.1 Protein Homology CDS 74206 75546 . + 0 ID=cds-WP_001295701.1;Parent=gene-AB69_RS10400;Dbxref=GenBank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AB69_RS10400;product=long-chain fatty acid transporter FadL;protein_id=WP_001295701.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 75912 76970 . + . ID=gene-AB69_RS10395;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AB69_RS10395;old_locus_tag=AB69_2539 NZ_JHDO01000088.1 Protein Homology CDS 75912 76970 . + 0 ID=cds-WP_000937788.1;Parent=gene-AB69_RS10395;Dbxref=GenBank:WP_000937788.1;Name=WP_000937788.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AB69_RS10395;product=protein YfdF;protein_id=WP_000937788.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 77152 77907 . - . ID=gene-AB69_RS10390;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AB69_RS10390;old_locus_tag=AB69_2540 NZ_JHDO01000088.1 Protein Homology CDS 77152 77907 . - 0 ID=cds-WP_000776768.1;Parent=gene-AB69_RS10390;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AB69_RS10390;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 78201 79133 . + . ID=gene-AB69_RS10385;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AB69_RS10385;old_locus_tag=AB69_2542 NZ_JHDO01000088.1 Protein Homology CDS 78201 79133 . + 0 ID=cds-WP_000368140.1;Parent=gene-AB69_RS10385;Dbxref=GenBank:WP_000368140.1;Name=WP_000368140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AB69_RS10385;product=formate/nitrite transporter family protein;protein_id=WP_000368140.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 79209 79283 . + . ID=gene-AB69_RS10380;Name=AB69_RS10380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10380;old_locus_tag=AB69_2543 NZ_JHDO01000088.1 tRNAscan-SE tRNA 79209 79283 . + . ID=rna-AB69_RS10380;Parent=gene-AB69_RS10380;anticodon=(pos:79242..79244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10380;product=tRNA-Arg NZ_JHDO01000088.1 tRNAscan-SE exon 79209 79283 . + . ID=exon-AB69_RS10380-1;Parent=rna-AB69_RS10380;anticodon=(pos:79242..79244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10380;product=tRNA-Arg NZ_JHDO01000088.1 RefSeq gene 79445 80602 . + . ID=gene-AB69_RS10375;Name=intS;gbkey=Gene;gene=intS;gene_biotype=protein_coding;locus_tag=AB69_RS10375;old_locus_tag=AB69_2544 NZ_JHDO01000088.1 Protein Homology CDS 79445 80602 . + 0 ID=cds-WP_021526115.1;Parent=gene-AB69_RS10375;Dbxref=GenBank:WP_021526115.1;Name=WP_021526115.1;gbkey=CDS;gene=intS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416850.1;locus_tag=AB69_RS10375;product=prophage integrase IntS;protein_id=WP_021526115.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 80937 81539 . + . ID=gene-AB69_RS0124675;Name=AB69_RS0124675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124675;old_locus_tag=AB69_2545 NZ_JHDO01000088.1 GeneMarkS-2+ CDS 80937 81539 . + 0 ID=cds-WP_021577015.1;Parent=gene-AB69_RS0124675;Dbxref=GenBank:WP_021577015.1;Name=WP_021577015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS0124675;product=hypothetical protein;protein_id=WP_021577015.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 81883 82920 . + . ID=gene-AB69_RS30375;Name=AB69_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30375;old_locus_tag=AB69_2546 NZ_JHDO01000088.1 Protein Homology CDS 81883 82920 . + 0 ID=cds-WP_248785139.1;Parent=gene-AB69_RS30375;Dbxref=GenBank:WP_248785139.1;Name=WP_248785139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254578.1;locus_tag=AB69_RS30375;product=hypothetical protein;protein_id=WP_248785139.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 83117 83671 . - . ID=gene-AB69_RS10365;Name=pinE;gbkey=Gene;gene=pinE;gene_biotype=protein_coding;locus_tag=AB69_RS10365;old_locus_tag=AB69_2547 NZ_JHDO01000088.1 Protein Homology CDS 83117 83671 . - 0 ID=cds-WP_032231239.1;Parent=gene-AB69_RS10365;Dbxref=GenBank:WP_032231239.1;Name=WP_032231239.1;gbkey=CDS;gene=pinE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364430.1;locus_tag=AB69_RS10365;product=site-specific DNA recombinase;protein_id=WP_032231239.1;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 83701 83982 . + . ID=gene-AB69_RS0124680;Name=AB69_RS0124680;end_range=83982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124680;partial=true;pseudo=true NZ_JHDO01000088.1 Protein Homology CDS 83701 83982 . + 0 ID=cds-AB69_RS0124680;Parent=gene-AB69_RS0124680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=83982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308310.1;locus_tag=AB69_RS0124680;partial=true;product=gp53-like domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 84024 84191 . - . ID=gene-AB69_RS29395;Name=AB69_RS29395;end_range=84191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29395;partial=true;pseudo=true NZ_JHDO01000088.1 Protein Homology CDS 84024 84191 . - 0 ID=cds-AB69_RS29395;Parent=gene-AB69_RS29395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0098003;end_range=84191,.;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526907.1;locus_tag=AB69_RS29395;partial=true;product=phage tail assembly protein;pseudo=true;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 84191 84304 . - . ID=gene-AB69_RS30880;Name=AB69_RS30880;end_range=84304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30880;partial=true;pseudo=true;start_range=.,84191 NZ_JHDO01000088.1 Protein Homology CDS 84191 84304 . - 0 ID=cds-AB69_RS30880;Parent=gene-AB69_RS30880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=84304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=AB69_RS30880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,84191;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 84305 84823 . - . ID=gene-AB69_RS0124685;Name=AB69_RS0124685;end_range=84823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124685;old_locus_tag=AB69_2549;partial=true;pseudo=true;start_range=.,84305 NZ_JHDO01000088.1 Protein Homology CDS 84305 84823 . - 0 ID=cds-AB69_RS0124685;Parent=gene-AB69_RS0124685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=84823,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=AB69_RS0124685;partial=true;product=phage major capsid protein;pseudo=true;start_range=.,84305;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 84819 84884 . - . ID=gene-AB69_RS27320;Name=AB69_RS27320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27320;partial=true;pseudo=true;start_range=.,84819 NZ_JHDO01000088.1 Protein Homology CDS 84819 84884 . - 0 ID=cds-AB69_RS27320;Parent=gene-AB69_RS27320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AB69_RS27320;partial=true;product=holin;pseudo=true;start_range=.,84819;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 85457 86554 . + . ID=gene-AB69_RS10360;Name=AB69_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10360;old_locus_tag=AB69_2550 NZ_JHDO01000088.1 Protein Homology CDS 85457 86554 . + 0 ID=cds-WP_000737280.1;Parent=gene-AB69_RS10360;Dbxref=GenBank:WP_000737280.1;Name=WP_000737280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AB69_RS10360;product=porin;protein_id=WP_000737280.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 86744 87127 . - . ID=gene-AB69_RS10355;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;locus_tag=AB69_RS10355;old_locus_tag=AB69_2551 NZ_JHDO01000088.1 Protein Homology CDS 86744 87127 . - 0 ID=cds-WP_001204791.1;Parent=gene-AB69_RS10355;Dbxref=GenBank:WP_001204791.1;Name=WP_001204791.1;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AB69_RS10355;product=antitermination protein QuuD;protein_id=WP_001204791.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 87213 87353 . - . ID=gene-AB69_RS10350;Name=ylcG;gbkey=Gene;gene=ylcG;gene_biotype=protein_coding;locus_tag=AB69_RS10350;old_locus_tag=AB69_2552 NZ_JHDO01000088.1 Protein Homology CDS 87213 87353 . - 0 ID=cds-WP_000971068.1;Parent=gene-AB69_RS10350;Dbxref=GenBank:WP_000971068.1;Name=WP_000971068.1;gbkey=CDS;gene=ylcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AB69_RS10350;product=YlcG family protein;protein_id=WP_000971068.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 87350 87712 . - . ID=gene-AB69_RS10345;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AB69_RS10345;old_locus_tag=AB69_2553 NZ_JHDO01000088.1 Protein Homology CDS 87350 87712 . - 0 ID=cds-WP_032231240.1;Parent=gene-AB69_RS10345;Dbxref=GenBank:WP_032231240.1;Name=WP_032231240.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309646.1;locus_tag=AB69_RS10345;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_032231240.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 87709 87999 . - . ID=gene-AB69_RS10340;Name=ybcO;gbkey=Gene;gene=ybcO;gene_biotype=protein_coding;locus_tag=AB69_RS10340;old_locus_tag=AB69_2554 NZ_JHDO01000088.1 Protein Homology CDS 87709 87999 . - 0 ID=cds-WP_000774486.1;Parent=gene-AB69_RS10340;Dbxref=GenBank:WP_000774486.1;Name=WP_000774486.1;gbkey=CDS;gene=ybcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415081.1;locus_tag=AB69_RS10340;product=DUF1364 domain-containing protein;protein_id=WP_000774486.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 87992 88162 . - . ID=gene-AB69_RS0124690;Name=ninE;gbkey=Gene;gene=ninE;gene_biotype=protein_coding;locus_tag=AB69_RS0124690 NZ_JHDO01000088.1 Protein Homology CDS 87992 88162 . - 0 ID=cds-WP_032231242.1;Parent=gene-AB69_RS0124690;Dbxref=GenBank:WP_032231242.1;Name=WP_032231242.1;gbkey=CDS;gene=ninE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415080.1;locus_tag=AB69_RS0124690;product=NinE family protein;protein_id=WP_032231242.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 88162 88617 . - . ID=gene-AB69_RS10335;Name=ybcN;gbkey=Gene;gene=ybcN;gene_biotype=protein_coding;locus_tag=AB69_RS10335;old_locus_tag=AB69_2555 NZ_JHDO01000088.1 Protein Homology CDS 88162 88617 . - 0 ID=cds-WP_001053016.1;Parent=gene-AB69_RS10335;Dbxref=GenBank:WP_001053016.1;Name=WP_001053016.1;gbkey=CDS;gene=ybcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415079.1;locus_tag=AB69_RS10335;product=DNA base-flipping protein YbcN;protein_id=WP_001053016.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 88614 88715 . - . ID=gene-AB69_RS28795;Name=AB69_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28795 NZ_JHDO01000088.1 Protein Homology CDS 88614 88715 . - 0 ID=cds-WP_001309322.1;Parent=gene-AB69_RS28795;Dbxref=GenBank:WP_001309322.1;Name=WP_001309322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165308.1;locus_tag=AB69_RS28795;product=hypothetical protein;protein_id=WP_001309322.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 88812 89321 . - . ID=gene-AB69_RS30385;Name=AB69_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30385 NZ_JHDO01000088.1 Protein Homology CDS 88812 89321 . - 0 ID=cds-WP_000990010.1;Parent=gene-AB69_RS30385;Dbxref=GenBank:WP_000990010.1;Name=WP_000990010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990010.1;locus_tag=AB69_RS30385;product=hypothetical protein;protein_id=WP_000990010.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 89557 90165 . - . ID=gene-AB69_RS10330;Name=AB69_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10330;old_locus_tag=AB69_2557 NZ_JHDO01000088.1 Protein Homology CDS 89557 90165 . - 0 ID=cds-WP_000211451.1;Parent=gene-AB69_RS10330;Dbxref=GenBank:WP_000211451.1;Name=WP_000211451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211451.1;locus_tag=AB69_RS10330;product=P22AR C-terminal domain-containing protein;protein_id=WP_000211451.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 90978 92480 . + . ID=gene-AB69_RS10325;Name=AB69_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10325;old_locus_tag=AB69_2558 NZ_JHDO01000088.1 Protein Homology CDS 90978 92480 . + 0 ID=cds-WP_032231243.1;Parent=gene-AB69_RS10325;Dbxref=GenBank:WP_032231243.1;Name=WP_032231243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001606968.1;locus_tag=AB69_RS10325;product=DUF4041 domain-containing protein;protein_id=WP_032231243.1;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 92722 92841 . + . ID=gene-AB69_RS10320;Name=AB69_RS10320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10320;old_locus_tag=AB69_2560;partial=true;pseudo=true;start_range=.,92722 NZ_JHDO01000088.1 Protein Homology CDS 92722 92841 . + 0 ID=cds-AB69_RS10320;Parent=gene-AB69_RS10320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AB69_RS10320;partial=true;product=host-nuclease inhibitor Gam family protein;pseudo=true;start_range=.,92722;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 92847 93632 . + . ID=gene-AB69_RS10315;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AB69_RS10315;old_locus_tag=AB69_2561 NZ_JHDO01000088.1 Protein Homology CDS 92847 93632 . + 0 ID=cds-WP_000100847.1;Parent=gene-AB69_RS10315;Dbxref=GenBank:WP_000100847.1;Name=WP_000100847.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311028.1;locus_tag=AB69_RS10315;product=phage recombination protein Bet;protein_id=WP_000100847.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 93629 94309 . + . ID=gene-AB69_RS10310;Name=AB69_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10310;old_locus_tag=AB69_2562 NZ_JHDO01000088.1 Protein Homology CDS 93629 94309 . + 0 ID=cds-WP_032231245.1;Parent=gene-AB69_RS10310;Dbxref=GenBank:WP_032231245.1;Name=WP_032231245.1;Ontology_term=GO:0004527,GO:0046872;gbkey=CDS;go_function=exonuclease activity|0004527||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308836.1;locus_tag=AB69_RS10310;product=lambda exonuclease family protein;protein_id=WP_032231245.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 94306 94488 . + . ID=gene-AB69_RS0124705;Name=AB69_RS0124705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124705 NZ_JHDO01000088.1 Protein Homology CDS 94306 94488 . + 0 ID=cds-WP_000682315.1;Parent=gene-AB69_RS0124705;Dbxref=GenBank:WP_000682315.1;Name=WP_000682315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311030.2;locus_tag=AB69_RS0124705;product=DUF1317 domain-containing protein;protein_id=WP_000682315.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 94461 94652 . + . ID=gene-AB69_RS0124710;Name=AB69_RS0124710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124710 NZ_JHDO01000088.1 Protein Homology CDS 94461 94652 . + 0 ID=cds-WP_000548522.1;Parent=gene-AB69_RS0124710;Dbxref=GenBank:WP_000548522.1;Name=WP_000548522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308834.1;locus_tag=AB69_RS0124710;product=DUF1382 family protein;protein_id=WP_000548522.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 94729 94944 . + . ID=gene-AB69_RS10305;Name=AB69_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10305;old_locus_tag=AB69_2564 NZ_JHDO01000088.1 Protein Homology CDS 94729 94944 . + 0 ID=cds-WP_000188870.1;Parent=gene-AB69_RS10305;Dbxref=GenBank:WP_000188870.1;Name=WP_000188870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151206.1;locus_tag=AB69_RS10305;product=hypothetical protein;protein_id=WP_000188870.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 95043 95261 . + . ID=gene-AB69_RS10300;Name=AB69_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10300;old_locus_tag=AB69_2565 NZ_JHDO01000088.1 Protein Homology CDS 95043 95261 . + 0 ID=cds-WP_000763385.1;Parent=gene-AB69_RS10300;Dbxref=GenBank:WP_000763385.1;Name=WP_000763385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246897.1;locus_tag=AB69_RS10300;product=TraR/DksA family transcriptional regulator;protein_id=WP_000763385.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 95309 95587 . + . ID=gene-AB69_RS0124720;Name=AB69_RS0124720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124720 NZ_JHDO01000088.1 Protein Homology CDS 95309 95587 . + 0 ID=cds-WP_000488407.1;Parent=gene-AB69_RS0124720;Dbxref=GenBank:WP_000488407.1;Name=WP_000488407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248605.1;locus_tag=AB69_RS0124720;product=DUF4222 domain-containing protein;protein_id=WP_000488407.1;transl_table=11 NZ_JHDO01000088.1 RefSeq pseudogene 95714 95917 . - . ID=gene-AB69_RS10295;Name=AB69_RS10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10295;old_locus_tag=AB69_2567;partial=true;pseudo=true;start_range=.,95714 NZ_JHDO01000088.1 Protein Homology CDS 95714 95917 . - 0 ID=cds-AB69_RS10295;Parent=gene-AB69_RS10295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AB69_RS10295;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,95714;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 96135 97472 . + . ID=gene-AB69_RS10290;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AB69_RS10290;old_locus_tag=AB69_2568 NZ_JHDO01000088.1 Protein Homology CDS 96135 97472 . + 0 ID=cds-WP_000556048.1;Parent=gene-AB69_RS10290;Dbxref=GenBank:WP_000556048.1;Name=WP_000556048.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AB69_RS10290;product=D-serine transporter DsdX;protein_id=WP_000556048.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 97490 98818 . + . ID=gene-AB69_RS10285;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AB69_RS10285;old_locus_tag=AB69_2569 NZ_JHDO01000088.1 Protein Homology CDS 97490 98818 . + 0 ID=cds-WP_000426427.1;Parent=gene-AB69_RS10285;Dbxref=GenBank:WP_000426427.1;Name=WP_000426427.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AB69_RS10285;product=D-serine ammonia-lyase;protein_id=WP_000426427.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 98926 100464 . - . ID=gene-AB69_RS10280;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AB69_RS10280;old_locus_tag=AB69_2570 NZ_JHDO01000088.1 Protein Homology CDS 98926 100464 . - 0 ID=cds-WP_001018714.1;Parent=gene-AB69_RS10280;Dbxref=GenBank:WP_001018714.1;Name=WP_001018714.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AB69_RS10280;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018714.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 100464 101627 . - . ID=gene-AB69_RS10275;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AB69_RS10275;old_locus_tag=AB69_2571 NZ_JHDO01000088.1 Protein Homology CDS 100464 101627 . - 0 ID=cds-WP_000435167.1;Parent=gene-AB69_RS10275;Dbxref=GenBank:WP_000435167.1;Name=WP_000435167.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AB69_RS10275;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435167.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 102043 102657 . + . ID=gene-AB69_RS10270;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AB69_RS10270;old_locus_tag=AB69_2572 NZ_JHDO01000088.1 Protein Homology CDS 102043 102657 . + 0 ID=cds-WP_000991370.1;Parent=gene-AB69_RS10270;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AB69_RS10270;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 102662 106255 . + . ID=gene-AB69_RS10265;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AB69_RS10265;old_locus_tag=AB69_2573 NZ_JHDO01000088.1 Protein Homology CDS 102662 106255 . + 0 ID=cds-WP_001326970.1;Parent=gene-AB69_RS10265;Dbxref=GenBank:WP_001326970.1;Name=WP_001326970.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AB69_RS10265;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001326970.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 106311 107456 . - . ID=gene-AB69_RS10260;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AB69_RS10260;old_locus_tag=AB69_2574 NZ_JHDO01000088.1 Protein Homology CDS 106311 107456 . - 0 ID=cds-WP_001296867.1;Parent=gene-AB69_RS10260;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AB69_RS10260;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 107530 108474 . - . ID=gene-AB69_RS10255;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AB69_RS10255;old_locus_tag=AB69_2575 NZ_JHDO01000088.1 Protein Homology CDS 107530 108474 . - 0 ID=cds-WP_000955028.1;Parent=gene-AB69_RS10255;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AB69_RS10255;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 108544 110238 . - . ID=gene-AB69_RS10250;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AB69_RS10250;old_locus_tag=AB69_2576 NZ_JHDO01000088.1 Protein Homology CDS 108544 110238 . - 0 ID=cds-WP_001283490.1;Parent=gene-AB69_RS10250;Dbxref=GenBank:WP_001283490.1;Name=WP_001283490.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AB69_RS10250;product=oxalyl-CoA decarboxylase;protein_id=WP_001283490.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 110292 111542 . - . ID=gene-AB69_RS10245;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AB69_RS10245;old_locus_tag=AB69_2577 NZ_JHDO01000088.1 Protein Homology CDS 110292 111542 . - 0 ID=cds-WP_000106759.1;Parent=gene-AB69_RS10245;Dbxref=GenBank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AB69_RS10245;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 112055 112690 . - . ID=gene-AB69_RS10240;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AB69_RS10240;old_locus_tag=AB69_2578 NZ_JHDO01000088.1 Protein Homology CDS 112055 112690 . - 0 ID=cds-WP_000825600.1;Parent=gene-AB69_RS10240;Dbxref=GenBank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=AB69_RS10240;product=YfdX family protein;protein_id=WP_000825600.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 112986 113261 . + . ID=gene-AB69_RS0124725;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AB69_RS0124725 NZ_JHDO01000088.1 Protein Homology CDS 112986 113261 . + 0 ID=cds-WP_000867631.1;Parent=gene-AB69_RS0124725;Dbxref=GenBank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AB69_RS0124725;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867631.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 113338 113580 . - . ID=gene-AB69_RS10235;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AB69_RS10235;old_locus_tag=AB69_2580 NZ_JHDO01000088.1 Protein Homology CDS 113338 113580 . - 0 ID=cds-WP_000609275.1;Parent=gene-AB69_RS10235;Dbxref=GenBank:WP_000609275.1;Name=WP_000609275.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416878.1;locus_tag=AB69_RS10235;product=YfdY family protein;protein_id=WP_000609275.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 113933 114853 . + . ID=gene-AB69_RS10230;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AB69_RS10230;old_locus_tag=AB69_2581 NZ_JHDO01000088.1 Protein Homology CDS 113933 114853 . + 0 ID=cds-WP_000484404.1;Parent=gene-AB69_RS10230;Dbxref=GenBank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AB69_RS10230;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 115209 115280 . + . ID=gene-AB69_RS28800;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AB69_RS28800 NZ_JHDO01000088.1 Protein Homology CDS 115209 115280 . + 0 ID=cds-WP_010723117.1;Parent=gene-AB69_RS28800;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AB69_RS28800;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 115345 116583 . - . ID=gene-AB69_RS10225;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AB69_RS10225;old_locus_tag=AB69_2583 NZ_JHDO01000088.1 Protein Homology CDS 115345 116583 . - 0 ID=cds-WP_000785931.1;Parent=gene-AB69_RS10225;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AB69_RS10225;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 116959 118656 . + . ID=gene-AB69_RS10220;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AB69_RS10220;old_locus_tag=AB69_2584 NZ_JHDO01000088.1 Protein Homology CDS 116959 118656 . + 0 ID=cds-WP_000544359.1;Parent=gene-AB69_RS10220;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AB69_RS10220;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 118671 119405 . + . ID=gene-AB69_RS10215;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AB69_RS10215;old_locus_tag=AB69_2585 NZ_JHDO01000088.1 Protein Homology CDS 118671 119405 . + 0 ID=cds-WP_001295458.1;Parent=gene-AB69_RS10215;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AB69_RS10215;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 119418 120275 . + . ID=gene-AB69_RS10210;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AB69_RS10210;old_locus_tag=AB69_2586 NZ_JHDO01000088.1 Protein Homology CDS 119418 120275 . + 0 ID=cds-WP_000646835.1;Parent=gene-AB69_RS10210;Dbxref=GenBank:WP_000646835.1;Name=WP_000646835.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AB69_RS10210;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 120278 122773 . - . ID=gene-AB69_RS10205;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB69_RS10205;old_locus_tag=AB69_2587 NZ_JHDO01000088.1 Protein Homology CDS 120278 122773 . - 0 ID=cds-WP_024239656.1;Parent=gene-AB69_RS10205;Dbxref=GenBank:WP_024239656.1;Name=WP_024239656.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AB69_RS10205;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_024239656.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 122798 123835 . - . ID=gene-AB69_RS10200;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AB69_RS10200;old_locus_tag=AB69_2588 NZ_JHDO01000088.1 Protein Homology CDS 122798 123835 . - 0 ID=cds-WP_000366028.1;Parent=gene-AB69_RS10200;Dbxref=GenBank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AB69_RS10200;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 123835 124920 . - . ID=gene-AB69_RS10195;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AB69_RS10195;old_locus_tag=AB69_2589 NZ_JHDO01000088.1 Protein Homology CDS 123835 124920 . - 0 ID=cds-WP_000173291.1;Parent=gene-AB69_RS10195;Dbxref=GenBank:WP_000173291.1;Name=WP_000173291.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AB69_RS10195;product=aminopeptidase;protein_id=WP_000173291.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 124935 126182 . - . ID=gene-AB69_RS10190;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AB69_RS10190;old_locus_tag=AB69_2590 NZ_JHDO01000088.1 Protein Homology CDS 124935 126182 . - 0 ID=cds-WP_000985359.1;Parent=gene-AB69_RS10190;Dbxref=GenBank:WP_000985359.1;Name=WP_000985359.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AB69_RS10190;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 126204 126530 . - . ID=gene-AB69_RS10185;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AB69_RS10185;old_locus_tag=AB69_2591 NZ_JHDO01000088.1 Protein Homology CDS 126204 126530 . - 0 ID=cds-WP_000038456.1;Parent=gene-AB69_RS10185;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AB69_RS10185;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 126749 127714 . - . ID=gene-AB69_RS10180;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AB69_RS10180;old_locus_tag=AB69_2592 NZ_JHDO01000088.1 Protein Homology CDS 126749 127714 . - 0 ID=cds-WP_000170346.1;Parent=gene-AB69_RS10180;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AB69_RS10180;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 127918 129174 . + . ID=gene-AB69_RS10175;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AB69_RS10175;old_locus_tag=AB69_2593 NZ_JHDO01000088.1 Protein Homology CDS 127918 129174 . + 0 ID=cds-WP_000903148.1;Parent=gene-AB69_RS10175;Dbxref=GenBank:WP_000903148.1;Name=WP_000903148.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AB69_RS10175;product=ion channel protein;protein_id=WP_000903148.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 129289 129615 . + . ID=gene-AB69_RS10170;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AB69_RS10170;old_locus_tag=AB69_2594 NZ_JHDO01000088.1 Protein Homology CDS 129289 129615 . + 0 ID=cds-WP_000490072.1;Parent=gene-AB69_RS10170;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AB69_RS10170;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 129756 130994 . - . ID=gene-AB69_RS10165;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AB69_RS10165;old_locus_tag=AB69_2595 NZ_JHDO01000088.1 Protein Homology CDS 129756 130994 . - 0 ID=cds-WP_000186369.1;Parent=gene-AB69_RS10165;Dbxref=GenBank:WP_000186369.1;Name=WP_000186369.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AB69_RS10165;product=Nramp family divalent metal transporter;protein_id=WP_000186369.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 130975 131064 . - . ID=gene-AB69_RS30885;Name=AB69_RS30885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30885 NZ_JHDO01000088.1 Protein Homology CDS 130975 131064 . - 0 ID=cds-WP_240811045.1;Parent=gene-AB69_RS30885;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AB69_RS30885;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 131330 132532 . + . ID=gene-AB69_RS10160;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AB69_RS10160;old_locus_tag=AB69_2596 NZ_JHDO01000088.1 Protein Homology CDS 131330 132532 . + 0 ID=cds-WP_000376337.1;Parent=gene-AB69_RS10160;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AB69_RS10160;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JHDO01000088.1 RefSeq gene 132582 133891 . - . ID=gene-AB69_RS0124740;Name=AB69_RS0124740;end_range=133891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124740;old_locus_tag=AB69_2597;partial=true NZ_JHDO01000088.1 Protein Homology CDS 132582 133891 . - 2 ID=cds-WP_032235693.1;Parent=gene-AB69_RS0124740;Dbxref=GenBank:WP_032235693.1;Name=WP_032235693.1;end_range=133891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB69_RS0124740;partial=true;product=EAL domain-containing protein;protein_id=WP_032235693.1;transl_table=11 ##sequence-region NZ_JHDO01000089.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000089.1 RefSeq region 1 3597 . + . ID=NZ_JHDO01000089.1:1..3597;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000089.1 RefSeq gene 1 1611 . - . ID=gene-AB69_RS10155;Name=AB69_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10155;old_locus_tag=AB69_2598;partial=true;start_range=.,1 NZ_JHDO01000089.1 Protein Homology CDS 1 1611 . - 0 ID=cds-WP_032235628.1-2;Parent=gene-AB69_RS10155;Dbxref=GenBank:WP_032235628.1;Name=WP_032235628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB69_RS10155;partial=true;product=MASE1 domain-containing protein;protein_id=WP_032235628.1;start_range=.,1;transl_table=11 NZ_JHDO01000089.1 RefSeq gene 1820 1895 . - . ID=gene-AB69_RS10150;Name=AB69_RS10150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10150;old_locus_tag=AB69_2599 NZ_JHDO01000089.1 tRNAscan-SE tRNA 1820 1895 . - . ID=rna-AB69_RS10150;Parent=gene-AB69_RS10150;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10150;product=tRNA-Ala NZ_JHDO01000089.1 tRNAscan-SE exon 1820 1895 . - . ID=exon-AB69_RS10150-1;Parent=rna-AB69_RS10150;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10150;product=tRNA-Ala NZ_JHDO01000089.1 RefSeq gene 2116 2475 . + . ID=gene-AB69_RS10145;Name=AB69_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10145;old_locus_tag=AB69_2600 NZ_JHDO01000089.1 Protein Homology CDS 2116 2475 . + 0 ID=cds-WP_000472021.1-2;Parent=gene-AB69_RS10145;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB69_RS10145;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDO01000089.1 RefSeq gene 2477 2869 . + . ID=gene-AB69_RS10140;Name=AB69_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10140;old_locus_tag=AB69_2601 NZ_JHDO01000089.1 Protein Homology CDS 2477 2869 . + 0 ID=cds-WP_000826503.1-2;Parent=gene-AB69_RS10140;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB69_RS10140;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDO01000089.1 RefSeq gene 2921 3597 . - . ID=gene-AB69_RS10135;Name=AB69_RS10135;end_range=3597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10135;old_locus_tag=AB69_2602;partial=true NZ_JHDO01000089.1 Protein Homology CDS 2921 3597 . - 2 ID=cds-WP_005115710.1;Parent=gene-AB69_RS10135;Dbxref=GenBank:WP_005115710.1;Name=WP_005115710.1;Ontology_term=GO:0043039,GO:0004812,GO:0005524;end_range=3597,.;gbkey=CDS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB69_RS10135;partial=true;product=glutamate--tRNA ligase family protein;protein_id=WP_005115710.1;transl_table=11 ##sequence-region NZ_JHDO01000090.1 1 3438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000090.1 RefSeq region 1 3438 . + . ID=NZ_JHDO01000090.1:1..3438;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000090.1 RefSeq gene 1 1611 . - . ID=gene-AB69_RS10130;Name=AB69_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10130;old_locus_tag=AB69_2603;partial=true;start_range=.,1 NZ_JHDO01000090.1 Protein Homology CDS 1 1611 . - 0 ID=cds-WP_032235628.1-3;Parent=gene-AB69_RS10130;Dbxref=GenBank:WP_032235628.1;Name=WP_032235628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB69_RS10130;partial=true;product=MASE1 domain-containing protein;protein_id=WP_032235628.1;start_range=.,1;transl_table=11 NZ_JHDO01000090.1 RefSeq gene 1820 1895 . - . ID=gene-AB69_RS10125;Name=AB69_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10125;old_locus_tag=AB69_2604 NZ_JHDO01000090.1 tRNAscan-SE tRNA 1820 1895 . - . ID=rna-AB69_RS10125;Parent=gene-AB69_RS10125;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10125;product=tRNA-Ala NZ_JHDO01000090.1 tRNAscan-SE exon 1820 1895 . - . ID=exon-AB69_RS10125-1;Parent=rna-AB69_RS10125;anticodon=(pos:complement(1860..1862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10125;product=tRNA-Ala NZ_JHDO01000090.1 RefSeq gene 1935 2010 . - . ID=gene-AB69_RS10120;Name=AB69_RS10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10120;old_locus_tag=AB69_2605 NZ_JHDO01000090.1 tRNAscan-SE tRNA 1935 2010 . - . ID=rna-AB69_RS10120;Parent=gene-AB69_RS10120;anticodon=(pos:complement(1975..1977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10120;product=tRNA-Ala NZ_JHDO01000090.1 tRNAscan-SE exon 1935 2010 . - . ID=exon-AB69_RS10120-1;Parent=rna-AB69_RS10120;anticodon=(pos:complement(1975..1977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10120;product=tRNA-Ala NZ_JHDO01000090.1 RefSeq gene 2050 2125 . - . ID=gene-AB69_RS10115;Name=AB69_RS10115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10115;old_locus_tag=AB69_2606 NZ_JHDO01000090.1 tRNAscan-SE tRNA 2050 2125 . - . ID=rna-AB69_RS10115;Parent=gene-AB69_RS10115;anticodon=(pos:complement(2090..2092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10115;product=tRNA-Ala NZ_JHDO01000090.1 tRNAscan-SE exon 2050 2125 . - . ID=exon-AB69_RS10115-1;Parent=rna-AB69_RS10115;anticodon=(pos:complement(2090..2092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10115;product=tRNA-Ala NZ_JHDO01000090.1 RefSeq gene 2165 2240 . - . ID=gene-AB69_RS10110;Name=AB69_RS10110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10110;old_locus_tag=AB69_2607 NZ_JHDO01000090.1 tRNAscan-SE tRNA 2165 2240 . - . ID=rna-AB69_RS10110;Parent=gene-AB69_RS10110;anticodon=(pos:complement(2205..2207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10110;product=tRNA-Ala NZ_JHDO01000090.1 tRNAscan-SE exon 2165 2240 . - . ID=exon-AB69_RS10110-1;Parent=rna-AB69_RS10110;anticodon=(pos:complement(2205..2207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10110;product=tRNA-Ala NZ_JHDO01000090.1 RefSeq gene 2461 2820 . + . ID=gene-AB69_RS10105;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AB69_RS10105;old_locus_tag=AB69_2608 NZ_JHDO01000090.1 Protein Homology CDS 2461 2820 . + 0 ID=cds-WP_000472021.1-3;Parent=gene-AB69_RS10105;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB69_RS10105;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JHDO01000090.1 RefSeq gene 2822 3214 . + . ID=gene-AB69_RS10100;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AB69_RS10100;old_locus_tag=AB69_2609 NZ_JHDO01000090.1 Protein Homology CDS 2822 3214 . + 0 ID=cds-WP_000826503.1-3;Parent=gene-AB69_RS10100;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB69_RS10100;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JHDO01000090.1 RefSeq gene 3266 3438 . - . ID=gene-AB69_RS30390;Name=AB69_RS30390;end_range=3438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30390;old_locus_tag=AB69_2610;partial=true NZ_JHDO01000090.1 Protein Homology CDS 3266 3438 . - 2 ID=cds-WP_074471734.1;Parent=gene-AB69_RS30390;Dbxref=GenBank:WP_074471734.1;Name=WP_074471734.1;end_range=3438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB69_RS30390;partial=true;product=glutamyl-tRNA synthetase;protein_id=WP_074471734.1;transl_table=11 ##sequence-region NZ_JHDO01000091.1 1 2710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000091.1 RefSeq region 1 2710 . + . ID=NZ_JHDO01000091.1:1..2710;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000091.1 RefSeq gene 1 273 . + . ID=gene-AB69_RS10095;Name=AB69_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10095;old_locus_tag=AB69_2611;partial=true;start_range=.,1 NZ_JHDO01000091.1 Protein Homology CDS 1 273 . + 0 ID=cds-WP_032179216.1;Parent=gene-AB69_RS10095;Dbxref=GenBank:WP_032179216.1;Name=WP_032179216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB69_RS10095;partial=true;product=YfeC-like transcriptional regulator;protein_id=WP_032179216.1;start_range=.,1;transl_table=11 NZ_JHDO01000091.1 RefSeq gene 325 1740 . - . ID=gene-AB69_RS10090;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AB69_RS10090;old_locus_tag=AB69_2612 NZ_JHDO01000091.1 Protein Homology CDS 325 1740 . - 0 ID=cds-WP_000695655.1;Parent=gene-AB69_RS10090;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB69_RS10090;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JHDO01000091.1 RefSeq gene 1999 2074 . + . ID=gene-AB69_RS10085;Name=AB69_RS10085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10085;old_locus_tag=AB69_2614 NZ_JHDO01000091.1 tRNAscan-SE tRNA 1999 2074 . + . ID=rna-AB69_RS10085;Parent=gene-AB69_RS10085;anticodon=(pos:2032..2034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10085;product=tRNA-Val NZ_JHDO01000091.1 tRNAscan-SE exon 1999 2074 . + . ID=exon-AB69_RS10085-1;Parent=rna-AB69_RS10085;anticodon=(pos:2032..2034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10085;product=tRNA-Val NZ_JHDO01000091.1 RefSeq gene 2119 2194 . + . ID=gene-AB69_RS10080;Name=AB69_RS10080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10080;old_locus_tag=AB69_2615 NZ_JHDO01000091.1 tRNAscan-SE tRNA 2119 2194 . + . ID=rna-AB69_RS10080;Parent=gene-AB69_RS10080;anticodon=(pos:2152..2154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10080;product=tRNA-Val NZ_JHDO01000091.1 tRNAscan-SE exon 2119 2194 . + . ID=exon-AB69_RS10080-1;Parent=rna-AB69_RS10080;anticodon=(pos:2152..2154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10080;product=tRNA-Val NZ_JHDO01000091.1 RefSeq gene 2239 2314 . + . ID=gene-AB69_RS10075;Name=AB69_RS10075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10075;old_locus_tag=AB69_2616 NZ_JHDO01000091.1 tRNAscan-SE tRNA 2239 2314 . + . ID=rna-AB69_RS10075;Parent=gene-AB69_RS10075;anticodon=(pos:2272..2274);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10075;product=tRNA-Val NZ_JHDO01000091.1 tRNAscan-SE exon 2239 2314 . + . ID=exon-AB69_RS10075-1;Parent=rna-AB69_RS10075;anticodon=(pos:2272..2274);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10075;product=tRNA-Val NZ_JHDO01000091.1 RefSeq gene 2361 2436 . + . ID=gene-AB69_RS10070;Name=AB69_RS10070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10070;old_locus_tag=AB69_2617 NZ_JHDO01000091.1 tRNAscan-SE tRNA 2361 2436 . + . ID=rna-AB69_RS10070;Parent=gene-AB69_RS10070;anticodon=(pos:2394..2396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10070;product=tRNA-Val NZ_JHDO01000091.1 tRNAscan-SE exon 2361 2436 . + . ID=exon-AB69_RS10070-1;Parent=rna-AB69_RS10070;anticodon=(pos:2394..2396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10070;product=tRNA-Val NZ_JHDO01000091.1 RefSeq gene 2441 2516 . + . ID=gene-AB69_RS10065;Name=AB69_RS10065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS10065;old_locus_tag=AB69_2618 NZ_JHDO01000091.1 tRNAscan-SE tRNA 2441 2516 . + . ID=rna-AB69_RS10065;Parent=gene-AB69_RS10065;anticodon=(pos:2474..2476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10065;product=tRNA-Lys NZ_JHDO01000091.1 tRNAscan-SE exon 2441 2516 . + . ID=exon-AB69_RS10065-1;Parent=rna-AB69_RS10065;anticodon=(pos:2474..2476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS10065;product=tRNA-Lys ##sequence-region NZ_JHDO01000092.1 1 196131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000092.1 RefSeq region 1 196131 . + . ID=NZ_JHDO01000092.1:1..196131;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000092.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS10060;Name=AB69_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS10060;old_locus_tag=AB69_2620 NZ_JHDO01000092.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-9;Parent=gene-AB69_RS10060;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10060;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000092.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-9;Parent=gene-AB69_RS10060;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS10060;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 761 1189 . + . ID=gene-AB69_RS10055;Name=AB69_RS10055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS10055;old_locus_tag=AB69_2621;partial=true;pseudo=true;start_range=.,761 NZ_JHDO01000092.1 Protein Homology CDS 761 1189 . + 0 ID=cds-AB69_RS10055;Parent=gene-AB69_RS10055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AB69_RS10055;partial=true;product=outer membrane protein OmpK;pseudo=true;start_range=.,761;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 1228 2154 . - . ID=gene-AB69_RS10050;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AB69_RS10050;old_locus_tag=AB69_2622 NZ_JHDO01000092.1 Protein Homology CDS 1228 2154 . - 0 ID=cds-WP_001109794.1;Parent=gene-AB69_RS10050;Dbxref=GenBank:WP_001109794.1;Name=WP_001109794.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AB69_RS10050;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 2244 3242 . + . ID=gene-AB69_RS10045;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AB69_RS10045;old_locus_tag=AB69_2623 NZ_JHDO01000092.1 Protein Homology CDS 2244 3242 . + 0 ID=cds-WP_000765610.1;Parent=gene-AB69_RS10045;Dbxref=GenBank:WP_000765610.1;Name=WP_000765610.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416905.1;locus_tag=AB69_RS10045;product=bile acid:sodium symporter family protein;protein_id=WP_000765610.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 3239 3457 . - . ID=gene-AB69_RS10040;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AB69_RS10040;old_locus_tag=AB69_2624 NZ_JHDO01000092.1 Protein Homology CDS 3239 3457 . - 0 ID=cds-WP_000410201.1;Parent=gene-AB69_RS10040;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AB69_RS10040;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 3459 5474 . - . ID=gene-AB69_RS10035;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AB69_RS10035;old_locus_tag=AB69_2625 NZ_JHDO01000092.1 Protein Homology CDS 3459 5474 . - 0 ID=cds-WP_000443661.1;Parent=gene-AB69_RS10035;Dbxref=GenBank:WP_000443661.1;Name=WP_000443661.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AB69_RS10035;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443661.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 5545 6531 . - . ID=gene-AB69_RS10030;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AB69_RS10030;old_locus_tag=AB69_2626 NZ_JHDO01000092.1 Protein Homology CDS 5545 6531 . - 0 ID=cds-WP_001300494.1;Parent=gene-AB69_RS10030;Dbxref=GenBank:WP_001300494.1;Name=WP_001300494.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416907.1;locus_tag=AB69_RS10030;product=cell division protein ZipA;protein_id=WP_001300494.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 6761 7522 . + . ID=gene-AB69_RS10025;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AB69_RS10025;old_locus_tag=AB69_2627 NZ_JHDO01000092.1 Protein Homology CDS 6761 7522 . + 0 ID=cds-WP_000254839.1;Parent=gene-AB69_RS10025;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AB69_RS10025;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 7707 8678 . + . ID=gene-AB69_RS10020;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AB69_RS10020;old_locus_tag=AB69_2628 NZ_JHDO01000092.1 Protein Homology CDS 7707 8678 . + 0 ID=cds-WP_000034402.1;Parent=gene-AB69_RS10020;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AB69_RS10020;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 9062 9319 . + . ID=gene-AB69_RS10015;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AB69_RS10015;old_locus_tag=AB69_2630 NZ_JHDO01000092.1 Protein Homology CDS 9062 9319 . + 0 ID=cds-WP_000487600.1;Parent=gene-AB69_RS10015;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AB69_RS10015;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 9364 11091 . + . ID=gene-AB69_RS10010;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AB69_RS10010;old_locus_tag=AB69_2631 NZ_JHDO01000092.1 Protein Homology CDS 9364 11091 . + 0 ID=cds-WP_000623140.1;Parent=gene-AB69_RS10010;Dbxref=GenBank:WP_000623140.1;Name=WP_000623140.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=AB69_RS10010;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623140.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 11132 11641 . + . ID=gene-AB69_RS10005;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AB69_RS10005;old_locus_tag=AB69_2632 NZ_JHDO01000092.1 Protein Homology CDS 11132 11641 . + 0 ID=cds-WP_000522247.1;Parent=gene-AB69_RS10005;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AB69_RS10005;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 11684 12535 . - . ID=gene-AB69_RS10000;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AB69_RS10000;old_locus_tag=AB69_2633 NZ_JHDO01000092.1 Protein Homology CDS 11684 12535 . - 0 ID=cds-WP_000096674.1;Parent=gene-AB69_RS10000;Dbxref=GenBank:WP_000096674.1;Name=WP_000096674.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AB69_RS10000;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 12640 13014 . + . ID=gene-AB69_RS09995;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AB69_RS09995;old_locus_tag=AB69_2634 NZ_JHDO01000092.1 Protein Homology CDS 12640 13014 . + 0 ID=cds-WP_000719962.1;Parent=gene-AB69_RS09995;Dbxref=GenBank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416914.1;locus_tag=AB69_RS09995;product=YfeK family protein;protein_id=WP_000719962.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 13047 13781 . + . ID=gene-AB69_RS09990;Name=yfeS;gbkey=Gene;gene=yfeS;gene_biotype=protein_coding;locus_tag=AB69_RS09990;old_locus_tag=AB69_2635 NZ_JHDO01000092.1 Protein Homology CDS 13047 13781 . + 0 ID=cds-WP_000745534.1;Parent=gene-AB69_RS09990;Dbxref=GenBank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;gene=yfeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416915.1;locus_tag=AB69_RS09990;product=WGR domain-containing protein;protein_id=WP_000745534.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 13970 14881 . - . ID=gene-AB69_RS09985;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AB69_RS09985;old_locus_tag=AB69_2636 NZ_JHDO01000092.1 Protein Homology CDS 13970 14881 . - 0 ID=cds-WP_001336044.1;Parent=gene-AB69_RS09985;Dbxref=GenBank:WP_001336044.1;Name=WP_001336044.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AB69_RS09985;product=cysteine synthase B;protein_id=WP_001336044.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 15015 16112 . - . ID=gene-AB69_RS09980;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AB69_RS09980;old_locus_tag=AB69_2637 NZ_JHDO01000092.1 Protein Homology CDS 15015 16112 . - 0 ID=cds-WP_000021036.1;Parent=gene-AB69_RS09980;Dbxref=GenBank:WP_000021036.1;Name=WP_000021036.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AB69_RS09980;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021036.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 16102 16977 . - . ID=gene-AB69_RS09975;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AB69_RS09975;old_locus_tag=AB69_2638 NZ_JHDO01000092.1 Protein Homology CDS 16102 16977 . - 0 ID=cds-WP_000852686.1;Parent=gene-AB69_RS09975;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AB69_RS09975;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 16977 17810 . - . ID=gene-AB69_RS09970;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AB69_RS09970;old_locus_tag=AB69_2639 NZ_JHDO01000092.1 Protein Homology CDS 16977 17810 . - 0 ID=cds-WP_000458406.1;Parent=gene-AB69_RS09970;Dbxref=GenBank:WP_000458406.1;Name=WP_000458406.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AB69_RS09970;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458406.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 17810 18826 . - . ID=gene-AB69_RS09965;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AB69_RS09965;old_locus_tag=AB69_2640 NZ_JHDO01000092.1 Protein Homology CDS 17810 18826 . - 0 ID=cds-WP_000290230.1;Parent=gene-AB69_RS09965;Dbxref=GenBank:WP_000290230.1;Name=WP_000290230.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416920.1;locus_tag=AB69_RS09965;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290230.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 19130 19921 . - . ID=gene-AB69_RS09960;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AB69_RS09960;old_locus_tag=AB69_2641 NZ_JHDO01000092.1 Protein Homology CDS 19130 19921 . - 0 ID=cds-WP_000517431.1;Parent=gene-AB69_RS09960;Dbxref=GenBank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AB69_RS09960;product=SDR family oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 20050 20907 . - . ID=gene-AB69_RS09955;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AB69_RS09955;old_locus_tag=AB69_2642 NZ_JHDO01000092.1 Protein Homology CDS 20050 20907 . - 0 ID=cds-WP_000966470.1;Parent=gene-AB69_RS09955;Dbxref=GenBank:WP_000966470.1;Name=WP_000966470.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AB69_RS09955;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966470.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 21071 21967 . + . ID=gene-AB69_RS09950;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AB69_RS09950;old_locus_tag=AB69_2643 NZ_JHDO01000092.1 Protein Homology CDS 21071 21967 . + 0 ID=cds-WP_001159160.1;Parent=gene-AB69_RS09950;Dbxref=GenBank:WP_001159160.1;Name=WP_001159160.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AB69_RS09950;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001159160.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 21971 23395 . + . ID=gene-AB69_RS09945;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AB69_RS09945;old_locus_tag=AB69_2644 NZ_JHDO01000092.1 Protein Homology CDS 21971 23395 . + 0 ID=cds-WP_001040483.1;Parent=gene-AB69_RS09945;Dbxref=GenBank:WP_001040483.1;Name=WP_001040483.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AB69_RS09945;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 23400 24704 . + . ID=gene-AB69_RS09940;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AB69_RS09940;old_locus_tag=AB69_2645 NZ_JHDO01000092.1 Protein Homology CDS 23400 24704 . + 0 ID=cds-WP_001327042.1;Parent=gene-AB69_RS09940;Dbxref=GenBank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416925.2;locus_tag=AB69_RS09940;product=penicillin binding protein PBP4B;protein_id=WP_001327042.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 24944 25843 . - . ID=gene-AB69_RS09935;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AB69_RS09935;old_locus_tag=AB69_2646 NZ_JHDO01000092.1 Protein Homology CDS 24944 25843 . - 0 ID=cds-WP_000084590.1;Parent=gene-AB69_RS09935;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AB69_RS09935;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 25939 26514 . - . ID=gene-AB69_RS09930;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AB69_RS09930;old_locus_tag=AB69_2647 NZ_JHDO01000092.1 Protein Homology CDS 25939 26514 . - 0 ID=cds-WP_000838944.1;Parent=gene-AB69_RS09930;Dbxref=GenBank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AB69_RS09930;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 26575 27024 . - . ID=gene-AB69_RS09925;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AB69_RS09925;old_locus_tag=AB69_2648 NZ_JHDO01000092.1 Protein Homology CDS 26575 27024 . - 0 ID=cds-WP_000842944.1;Parent=gene-AB69_RS09925;Dbxref=GenBank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AB69_RS09925;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 27011 27436 . - . ID=gene-AB69_RS09920;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AB69_RS09920;old_locus_tag=AB69_2649 NZ_JHDO01000092.1 Protein Homology CDS 27011 27436 . - 0 ID=cds-WP_000405996.1;Parent=gene-AB69_RS09920;Dbxref=GenBank:WP_000405996.1;Name=WP_000405996.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416929.4;locus_tag=AB69_RS09920;product=GNAT family acetyltransferase;protein_id=WP_000405996.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 27650 28519 . + . ID=gene-AB69_RS09915;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AB69_RS09915;old_locus_tag=AB69_2650 NZ_JHDO01000092.1 Protein Homology CDS 27650 28519 . + 0 ID=cds-WP_000102886.1;Parent=gene-AB69_RS09915;Dbxref=GenBank:WP_000102886.1;Name=WP_000102886.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416930.1;locus_tag=AB69_RS09915;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102886.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 28523 29422 . + . ID=gene-AB69_RS09910;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AB69_RS09910;old_locus_tag=AB69_2651 NZ_JHDO01000092.1 Protein Homology CDS 28523 29422 . + 0 ID=cds-WP_000801365.1;Parent=gene-AB69_RS09910;Dbxref=GenBank:WP_000801365.1;Name=WP_000801365.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AB69_RS09910;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801365.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 29428 30480 . - . ID=gene-AB69_RS09905;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AB69_RS09905;old_locus_tag=AB69_2652 NZ_JHDO01000092.1 Protein Homology CDS 29428 30480 . - 0 ID=cds-WP_000753690.1;Parent=gene-AB69_RS09905;Dbxref=GenBank:WP_000753690.1;Name=WP_000753690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416932.1;locus_tag=AB69_RS09905;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753690.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 30526 31026 . - . ID=gene-AB69_RS09900;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AB69_RS09900;old_locus_tag=AB69_2653 NZ_JHDO01000092.1 Protein Homology CDS 30526 31026 . - 0 ID=cds-WP_000606257.1;Parent=gene-AB69_RS09900;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AB69_RS09900;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 31039 31698 . - . ID=gene-AB69_RS09895;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AB69_RS09895;old_locus_tag=AB69_2654 NZ_JHDO01000092.1 Protein Homology CDS 31039 31698 . - 0 ID=cds-WP_001111023.1;Parent=gene-AB69_RS09895;Dbxref=GenBank:WP_001111023.1;Name=WP_001111023.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AB69_RS09895;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111023.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 31708 32595 . - . ID=gene-AB69_RS09890;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AB69_RS09890;old_locus_tag=AB69_2655 NZ_JHDO01000092.1 Protein Homology CDS 31708 32595 . - 0 ID=cds-WP_000372316.1;Parent=gene-AB69_RS09890;Dbxref=GenBank:WP_000372316.1;Name=WP_000372316.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AB69_RS09890;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372316.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 32616 33977 . - . ID=gene-AB69_RS09885;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AB69_RS09885;old_locus_tag=AB69_2656 NZ_JHDO01000092.1 Protein Homology CDS 32616 33977 . - 0 ID=cds-WP_001464560.1;Parent=gene-AB69_RS09885;Dbxref=GenBank:WP_001464560.1;Name=WP_001464560.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AB69_RS09885;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_001464560.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 33989 35392 . - . ID=gene-AB69_RS09880;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AB69_RS09880;old_locus_tag=AB69_2657 NZ_JHDO01000092.1 Protein Homology CDS 33989 35392 . - 0 ID=cds-WP_001097542.1;Parent=gene-AB69_RS09880;Dbxref=GenBank:WP_001097542.1;Name=WP_001097542.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416946.1;locus_tag=AB69_RS09880;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097542.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 35389 36615 . - . ID=gene-AB69_RS09875;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AB69_RS09875;old_locus_tag=AB69_2658 NZ_JHDO01000092.1 Protein Homology CDS 35389 36615 . - 0 ID=cds-WP_000512372.1;Parent=gene-AB69_RS09875;Dbxref=GenBank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AB69_RS09875;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 36832 38019 . - . ID=gene-AB69_RS09870;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AB69_RS09870;old_locus_tag=AB69_2659 NZ_JHDO01000092.1 Protein Homology CDS 36832 38019 . - 0 ID=cds-WP_001326575.1;Parent=gene-AB69_RS09870;Dbxref=GenBank:WP_001326575.1;Name=WP_001326575.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416948.4;locus_tag=AB69_RS09870;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001326575.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 38009 38845 . - . ID=gene-AB69_RS09865;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AB69_RS09865;old_locus_tag=AB69_2660 NZ_JHDO01000092.1 Protein Homology CDS 38009 38845 . - 0 ID=cds-WP_000929729.1;Parent=gene-AB69_RS09865;Dbxref=GenBank:WP_000929729.1;Name=WP_000929729.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AB69_RS09865;product=ethanolamine utilization protein EutJ;protein_id=WP_000929729.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 38856 40259 . - . ID=gene-AB69_RS09860;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AB69_RS09860;old_locus_tag=AB69_2661 NZ_JHDO01000092.1 Protein Homology CDS 38856 40259 . - 0 ID=cds-WP_001075716.1;Parent=gene-AB69_RS09860;Dbxref=GenBank:WP_001075716.1;Name=WP_001075716.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AB69_RS09860;product=aldehyde dehydrogenase family protein;protein_id=WP_001075716.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 40271 40558 . - . ID=gene-AB69_RS09855;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AB69_RS09855;old_locus_tag=AB69_2662 NZ_JHDO01000092.1 Protein Homology CDS 40271 40558 . - 0 ID=cds-WP_000762196.1;Parent=gene-AB69_RS09855;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AB69_RS09855;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 40665 40958 . - . ID=gene-AB69_RS09850;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AB69_RS09850;old_locus_tag=AB69_2663 NZ_JHDO01000092.1 Protein Homology CDS 40665 40958 . - 0 ID=cds-WP_000387713.1;Parent=gene-AB69_RS09850;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AB69_RS09850;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 40997 42013 . - . ID=gene-AB69_RS09845;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AB69_RS09845;old_locus_tag=AB69_2664 NZ_JHDO01000092.1 Protein Homology CDS 40997 42013 . - 0 ID=cds-WP_000582977.1;Parent=gene-AB69_RS09845;Dbxref=GenBank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AB69_RS09845;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 42010 42813 . - . ID=gene-AB69_RS09840;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AB69_RS09840;old_locus_tag=AB69_2665 NZ_JHDO01000092.1 Protein Homology CDS 42010 42813 . - 0 ID=cds-WP_000651298.1;Parent=gene-AB69_RS09840;Dbxref=GenBank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AB69_RS09840;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 42810 43511 . - . ID=gene-AB69_RS09835;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AB69_RS09835;old_locus_tag=AB69_2666 NZ_JHDO01000092.1 Protein Homology CDS 42810 43511 . - 0 ID=cds-WP_000733906.1;Parent=gene-AB69_RS09835;Dbxref=GenBank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AB69_RS09835;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 43486 43965 . - . ID=gene-AB69_RS09830;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AB69_RS09830;old_locus_tag=AB69_2667 NZ_JHDO01000092.1 Protein Homology CDS 43486 43965 . - 0 ID=cds-WP_000820762.1;Parent=gene-AB69_RS09830;Dbxref=GenBank:WP_000820762.1;Name=WP_000820762.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416956.1;locus_tag=AB69_RS09830;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820762.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 43978 44313 . - . ID=gene-AB69_RS09825;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AB69_RS09825;old_locus_tag=AB69_2668 NZ_JHDO01000092.1 Protein Homology CDS 43978 44313 . - 0 ID=cds-WP_000356956.1;Parent=gene-AB69_RS09825;Dbxref=GenBank:WP_000356956.1;Name=WP_000356956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AB69_RS09825;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_000356956.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 44606 46885 . - . ID=gene-AB69_RS09820;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AB69_RS09820;old_locus_tag=AB69_2669 NZ_JHDO01000092.1 Protein Homology CDS 44606 46885 . - 0 ID=cds-WP_000342644.1;Parent=gene-AB69_RS09820;Dbxref=GenBank:WP_000342644.1;Name=WP_000342644.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416958.1;locus_tag=AB69_RS09820;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342644.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 47174 48124 . + . ID=gene-AB69_RS09815;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB69_RS09815;old_locus_tag=AB69_2670 NZ_JHDO01000092.1 Protein Homology CDS 47174 48124 . + 0 ID=cds-WP_001003709.1;Parent=gene-AB69_RS09815;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AB69_RS09815;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 48144 50147 . + . ID=gene-AB69_RS09810;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB69_RS09810;old_locus_tag=AB69_2671 NZ_JHDO01000092.1 Protein Homology CDS 48144 50147 . + 0 ID=cds-WP_000087280.1;Parent=gene-AB69_RS09810;Dbxref=GenBank:WP_000087280.1;Name=WP_000087280.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AB69_RS09810;product=transketolase;protein_id=WP_000087280.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 50242 51285 . - . ID=gene-AB69_RS09805;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AB69_RS09805;old_locus_tag=AB69_2672 NZ_JHDO01000092.1 Protein Homology CDS 50242 51285 . - 0 ID=cds-WP_001270542.1;Parent=gene-AB69_RS09805;Dbxref=GenBank:WP_001270542.1;Name=WP_001270542.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=AB69_RS09805;product=DUF1176 domain-containing protein;protein_id=WP_001270542.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 51411 51986 . - . ID=gene-AB69_RS09800;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AB69_RS09800;old_locus_tag=AB69_2673 NZ_JHDO01000092.1 Protein Homology CDS 51411 51986 . - 0 ID=cds-WP_001416656.1;Parent=gene-AB69_RS09800;Dbxref=GenBank:WP_001416656.1;Name=WP_001416656.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416962.1;locus_tag=AB69_RS09800;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_001416656.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 52054 54033 . - . ID=gene-AB69_RS09795;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AB69_RS09795;old_locus_tag=AB69_2674 NZ_JHDO01000092.1 Protein Homology CDS 52054 54033 . - 0 ID=cds-WP_001078880.1;Parent=gene-AB69_RS09795;Dbxref=GenBank:WP_001078880.1;Name=WP_001078880.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AB69_RS09795;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078880.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 54239 55939 . + . ID=gene-AB69_RS09790;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AB69_RS09790;old_locus_tag=AB69_2676 NZ_JHDO01000092.1 Protein Homology CDS 54239 55939 . + 0 ID=cds-WP_032231368.1;Parent=gene-AB69_RS09790;Dbxref=GenBank:WP_032231368.1;Name=WP_032231368.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AB69_RS09790;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_032231368.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 56103 59216 . + . ID=gene-AB69_RS09785;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AB69_RS09785;old_locus_tag=AB69_2677 NZ_JHDO01000092.1 Protein Homology CDS 56103 59216 . + 0 ID=cds-WP_001273151.1;Parent=gene-AB69_RS09785;Dbxref=GenBank:WP_001273151.1;Name=WP_001273151.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AB69_RS09785;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273151.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 59315 59374 . - . ID=gene-AB69_RS28825;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AB69_RS28825 NZ_JHDO01000092.1 Protein Homology CDS 59315 59374 . - 0 ID=cds-WP_001386977.1;Parent=gene-AB69_RS28825;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AB69_RS28825;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 59755 60111 . + . ID=gene-AB69_RS09780;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AB69_RS09780;old_locus_tag=AB69_2678 NZ_JHDO01000092.1 Protein Homology CDS 59755 60111 . + 0 ID=cds-WP_000258236.1;Parent=gene-AB69_RS09780;Dbxref=GenBank:WP_000258236.1;Name=WP_000258236.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416966.1;locus_tag=AB69_RS09780;product=ArsC family reductase;protein_id=WP_000258236.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 60115 61242 . + . ID=gene-AB69_RS09775;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AB69_RS09775;old_locus_tag=AB69_2679 NZ_JHDO01000092.1 Protein Homology CDS 60115 61242 . + 0 ID=cds-WP_001277801.1;Parent=gene-AB69_RS09775;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AB69_RS09775;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 61270 61470 . + . ID=gene-AB69_RS09770;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AB69_RS09770;old_locus_tag=AB69_2680 NZ_JHDO01000092.1 Protein Homology CDS 61270 61470 . + 0 ID=cds-WP_000383836.1;Parent=gene-AB69_RS09770;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AB69_RS09770;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 61580 62278 . - . ID=gene-AB69_RS09765;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AB69_RS09765;old_locus_tag=AB69_2681 NZ_JHDO01000092.1 Protein Homology CDS 61580 62278 . - 0 ID=cds-WP_000679799.1;Parent=gene-AB69_RS09765;Dbxref=GenBank:WP_000679799.1;Name=WP_000679799.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=AB69_RS09765;product=esterase;protein_id=WP_000679799.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 62352 64367 . - . ID=gene-AB69_RS09760;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AB69_RS09760;old_locus_tag=AB69_2682 NZ_JHDO01000092.1 Protein Homology CDS 62352 64367 . - 0 ID=cds-WP_000829360.1;Parent=gene-AB69_RS09760;Dbxref=GenBank:WP_000829360.1;Name=WP_000829360.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416969.1;locus_tag=AB69_RS09760;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_000829360.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 64382 65245 . - . ID=gene-AB69_RS09755;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AB69_RS09755;old_locus_tag=AB69_2683 NZ_JHDO01000092.1 Protein Homology CDS 64382 65245 . - 0 ID=cds-WP_001267498.1;Parent=gene-AB69_RS09755;Dbxref=GenBank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AB69_RS09755;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 65413 66126 . - . ID=gene-AB69_RS09750;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AB69_RS09750;old_locus_tag=AB69_2684 NZ_JHDO01000092.1 Protein Homology CDS 65413 66126 . - 0 ID=cds-WP_001295467.1;Parent=gene-AB69_RS09750;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AB69_RS09750;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 66339 67373 . - . ID=gene-AB69_RS09745;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AB69_RS09745;old_locus_tag=AB69_2685 NZ_JHDO01000092.1 Protein Homology CDS 66339 67373 . - 0 ID=cds-WP_001297320.1;Parent=gene-AB69_RS09745;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AB69_RS09745;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 67390 68268 . - . ID=gene-AB69_RS09740;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AB69_RS09740;old_locus_tag=AB69_2686 NZ_JHDO01000092.1 Protein Homology CDS 67390 68268 . - 0 ID=cds-WP_001311023.1;Parent=gene-AB69_RS09740;Dbxref=GenBank:WP_001311023.1;Name=WP_001311023.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AB69_RS09740;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001311023.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 68414 68986 . + . ID=gene-AB69_RS09735;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AB69_RS09735;old_locus_tag=AB69_2687 NZ_JHDO01000092.1 Protein Homology CDS 68414 68986 . + 0 ID=cds-WP_000176187.1;Parent=gene-AB69_RS09735;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AB69_RS09735;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 68986 69456 . + . ID=gene-AB69_RS09730;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AB69_RS09730;old_locus_tag=AB69_2688 NZ_JHDO01000092.1 Protein Homology CDS 68986 69456 . + 0 ID=cds-WP_001068682.1;Parent=gene-AB69_RS09730;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AB69_RS09730;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 69709 70326 . + . ID=gene-AB69_RS09725;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AB69_RS09725;old_locus_tag=AB69_2689 NZ_JHDO01000092.1 Protein Homology CDS 69709 70326 . + 0 ID=cds-WP_032235694.1;Parent=gene-AB69_RS09725;Dbxref=GenBank:WP_032235694.1;Name=WP_032235694.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416976.4;locus_tag=AB69_RS09725;product=hydrogenase 4 subunit HyfA;protein_id=WP_032235694.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 70326 72343 . + . ID=gene-AB69_RS09715;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=pseudogene;locus_tag=AB69_RS09715;old_locus_tag=AB69_2691;pseudo=true NZ_JHDO01000092.1 Protein Homology CDS 70326 72343 . + 0 ID=cds-AB69_RS09715;Parent=gene-AB69_RS09715;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AB69_RS09715;product=hydrogenase 4 subunit B;pseudo=true;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 72354 73301 . + . ID=gene-AB69_RS09710;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AB69_RS09710;old_locus_tag=AB69_2692 NZ_JHDO01000092.1 Protein Homology CDS 72354 73301 . + 0 ID=cds-WP_001325575.1;Parent=gene-AB69_RS09710;Dbxref=GenBank:WP_001325575.1;Name=WP_001325575.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708321.1;locus_tag=AB69_RS09710;product=hydrogenase 4 subunit HyfC;protein_id=WP_001325575.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 73318 74757 . + . ID=gene-AB69_RS09705;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=AB69_RS09705;old_locus_tag=AB69_2693 NZ_JHDO01000092.1 Protein Homology CDS 73318 74757 . + 0 ID=cds-WP_032231372.1;Parent=gene-AB69_RS09705;Dbxref=GenBank:WP_032231372.1;Name=WP_032231372.1;gbkey=CDS;gene=hyfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AB69_RS09705;product=hydrogenase 4 subunit HyfD;protein_id=WP_032231372.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 74769 75419 . + . ID=gene-AB69_RS09700;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AB69_RS09700;old_locus_tag=AB69_2694 NZ_JHDO01000092.1 Protein Homology CDS 74769 75419 . + 0 ID=cds-WP_032231373.1;Parent=gene-AB69_RS09700;Dbxref=GenBank:WP_032231373.1;Name=WP_032231373.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AB69_RS09700;product=hydrogenase 4 membrane subunit;protein_id=WP_032231373.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 75424 77004 . + . ID=gene-AB69_RS09695;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AB69_RS09695;old_locus_tag=AB69_2695 NZ_JHDO01000092.1 Protein Homology CDS 75424 77004 . + 0 ID=cds-WP_032231375.1;Parent=gene-AB69_RS09695;Dbxref=GenBank:WP_032231375.1;Name=WP_032231375.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416981.1;locus_tag=AB69_RS09695;product=hydrogenase 4 subunit F;protein_id=WP_032231375.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 76994 78661 . + . ID=gene-AB69_RS09690;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AB69_RS09690;old_locus_tag=AB69_2696 NZ_JHDO01000092.1 Protein Homology CDS 76994 78661 . + 0 ID=cds-WP_001102321.1;Parent=gene-AB69_RS09690;Dbxref=GenBank:WP_001102321.1;Name=WP_001102321.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AB69_RS09690;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102321.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 78671 79210 . + . ID=gene-AB69_RS09685;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AB69_RS09685;old_locus_tag=AB69_2697 NZ_JHDO01000092.1 Protein Homology CDS 78671 79210 . + 0 ID=cds-WP_032231377.1;Parent=gene-AB69_RS09685;Dbxref=GenBank:WP_032231377.1;Name=WP_032231377.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416983.1;locus_tag=AB69_RS09685;product=hydrogenase 4 subunit H;protein_id=WP_032231377.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 79207 79964 . + . ID=gene-AB69_RS0124765;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=pseudogene;locus_tag=AB69_RS0124765;old_locus_tag=AB69_2698;pseudo=true NZ_JHDO01000092.1 Protein Homology CDS 79207 79964 . + 0 ID=cds-AB69_RS0124765;Parent=gene-AB69_RS0124765;Note=frameshifted;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AB69_RS0124765;product=hydrogenase 4 catalytic subunit HyfI;pseudo=true;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 79957 80370 . + . ID=gene-AB69_RS09680;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AB69_RS09680;old_locus_tag=AB69_2700 NZ_JHDO01000092.1 Protein Homology CDS 79957 80370 . + 0 ID=cds-WP_000133937.1;Parent=gene-AB69_RS09680;Dbxref=GenBank:WP_000133937.1;Name=WP_000133937.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AB69_RS09680;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_000133937.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 80400 82412 . + . ID=gene-AB69_RS09675;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AB69_RS09675;old_locus_tag=AB69_2701 NZ_JHDO01000092.1 Protein Homology CDS 80400 82412 . + 0 ID=cds-WP_032231378.1;Parent=gene-AB69_RS09675;Dbxref=GenBank:WP_032231378.1;Name=WP_032231378.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311380.2;locus_tag=AB69_RS09675;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_032231378.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 82434 83283 . + . ID=gene-AB69_RS09670;Name=focB;gbkey=Gene;gene=focB;gene_biotype=pseudogene;locus_tag=AB69_RS09670;old_locus_tag=AB69_2702;pseudo=true NZ_JHDO01000092.1 Protein Homology CDS 82434 83283 . + 0 ID=cds-AB69_RS09670;Parent=gene-AB69_RS09670;Note=frameshifted;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AB69_RS09670;product=formate transporter FocB;pseudo=true;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 83321 84382 . - . ID=gene-AB69_RS09665;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AB69_RS09665;old_locus_tag=AB69_2703 NZ_JHDO01000092.1 Protein Homology CDS 83321 84382 . - 0 ID=cds-WP_000892044.1;Parent=gene-AB69_RS09665;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AB69_RS09665;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 84595 86058 . + . ID=gene-AB69_RS09660;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AB69_RS09660;old_locus_tag=AB69_2704 NZ_JHDO01000092.1 Protein Homology CDS 84595 86058 . + 0 ID=cds-WP_000489667.1;Parent=gene-AB69_RS09660;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AB69_RS09660;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 86079 86438 . + . ID=gene-AB69_RS09655;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB69_RS09655;old_locus_tag=AB69_2705 NZ_JHDO01000092.1 Protein Homology CDS 86079 86438 . + 0 ID=cds-WP_000166449.1;Parent=gene-AB69_RS09655;Dbxref=GenBank:WP_000166449.1;Name=WP_000166449.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AB69_RS09655;product=arsenate reductase (glutaredoxin);protein_id=WP_000166449.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 86576 87277 . - . ID=gene-AB69_RS09650;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AB69_RS09650;old_locus_tag=AB69_2706 NZ_JHDO01000092.1 Protein Homology CDS 86576 87277 . - 0 ID=cds-WP_001307333.1;Parent=gene-AB69_RS09650;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AB69_RS09650;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 87372 88661 . - . ID=gene-AB69_RS09645;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AB69_RS09645;old_locus_tag=AB69_2707 NZ_JHDO01000092.1 Protein Homology CDS 87372 88661 . - 0 ID=cds-WP_000198328.1;Parent=gene-AB69_RS09645;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AB69_RS09645;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 88747 89373 . - . ID=gene-AB69_RS09640;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AB69_RS09640;old_locus_tag=AB69_2708 NZ_JHDO01000092.1 Protein Homology CDS 88747 89373 . - 0 ID=cds-WP_001295473.1;Parent=gene-AB69_RS09640;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AB69_RS09640;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 89698 90735 . + . ID=gene-AB69_RS09635;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AB69_RS09635;old_locus_tag=AB69_2710 NZ_JHDO01000092.1 Protein Homology CDS 89698 90735 . + 0 ID=cds-WP_001295474.1;Parent=gene-AB69_RS09635;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AB69_RS09635;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 90735 91373 . + . ID=gene-AB69_RS09630;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AB69_RS09630;old_locus_tag=AB69_2711 NZ_JHDO01000092.1 Protein Homology CDS 90735 91373 . + 0 ID=cds-WP_001028608.1;Parent=gene-AB69_RS09630;Dbxref=GenBank:WP_001028608.1;Name=WP_001028608.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=AB69_RS09630;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028608.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 91544 93610 . + . ID=gene-AB69_RS09625;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AB69_RS09625;old_locus_tag=AB69_2712 NZ_JHDO01000092.1 Protein Homology CDS 91544 93610 . + 0 ID=cds-WP_000529576.1;Parent=gene-AB69_RS09625;Dbxref=GenBank:WP_000529576.1;Name=WP_000529576.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AB69_RS09625;product=polyphosphate kinase 1;protein_id=WP_000529576.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 93615 95156 . + . ID=gene-AB69_RS09620;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AB69_RS09620;old_locus_tag=AB69_2713 NZ_JHDO01000092.1 Protein Homology CDS 93615 95156 . + 0 ID=cds-WP_001121363.1;Parent=gene-AB69_RS09620;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AB69_RS09620;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 95195 97438 . - . ID=gene-AB69_RS09615;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AB69_RS09615;old_locus_tag=AB69_2714 NZ_JHDO01000092.1 Protein Homology CDS 95195 97438 . - 0 ID=cds-WP_000772731.1;Parent=gene-AB69_RS09615;Dbxref=GenBank:WP_000772731.1;Name=WP_000772731.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AB69_RS09615;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772731.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 97620 97772 . - . ID=gene-AB69_RS09610;Name=AB69_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09610;old_locus_tag=AB69_2715 NZ_JHDO01000092.1 Protein Homology CDS 97620 97772 . - 0 ID=cds-WP_000017552.1;Parent=gene-AB69_RS09610;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AB69_RS09610;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 97790 97981 . + . ID=gene-AB69_RS09605;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AB69_RS09605;old_locus_tag=AB69_2716 NZ_JHDO01000092.1 Protein Homology CDS 97790 97981 . + 0 ID=cds-WP_000076001.1;Parent=gene-AB69_RS09605;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AB69_RS09605;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 98292 98810 . + . ID=gene-AB69_RS09600;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AB69_RS09600;old_locus_tag=AB69_2717 NZ_JHDO01000092.1 Protein Homology CDS 98292 98810 . + 0 ID=cds-WP_001295476.1;Parent=gene-AB69_RS09600;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AB69_RS09600;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 98826 99365 . + . ID=gene-AB69_RS09595;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AB69_RS09595;old_locus_tag=AB69_2718 NZ_JHDO01000092.1 Protein Homology CDS 98826 99365 . + 0 ID=cds-WP_000755173.1;Parent=gene-AB69_RS09595;Dbxref=GenBank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AB69_RS09595;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 99458 101035 . - . ID=gene-AB69_RS09590;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AB69_RS09590;old_locus_tag=AB69_2719 NZ_JHDO01000092.1 Protein Homology CDS 99458 101035 . - 0 ID=cds-WP_000138270.1;Parent=gene-AB69_RS09590;Dbxref=GenBank:WP_000138270.1;Name=WP_000138270.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AB69_RS09590;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 101104 102570 . - . ID=gene-AB69_RS09585;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AB69_RS09585;old_locus_tag=AB69_2720 NZ_JHDO01000092.1 Protein Homology CDS 101104 102570 . - 0 ID=cds-WP_001299507.1;Parent=gene-AB69_RS09585;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AB69_RS09585;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 102732 104102 . + . ID=gene-AB69_RS09580;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AB69_RS09580;old_locus_tag=AB69_2722 NZ_JHDO01000092.1 Protein Homology CDS 102732 104102 . + 0 ID=cds-WP_000937912.1;Parent=gene-AB69_RS09580;Dbxref=GenBank:WP_000937912.1;Name=WP_000937912.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AB69_RS09580;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937912.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 104099 104314 . - . ID=gene-AB69_RS09575;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AB69_RS09575;old_locus_tag=AB69_2723 NZ_JHDO01000092.1 Protein Homology CDS 104099 104314 . - 0 ID=cds-WP_001301158.1;Parent=gene-AB69_RS09575;Dbxref=GenBank:WP_001301158.1;Name=WP_001301158.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AB69_RS09575;product=zinc ribbon domain-containing protein;protein_id=WP_001301158.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 104384 105856 . - . ID=gene-AB69_RS09570;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AB69_RS09570;old_locus_tag=AB69_2724 NZ_JHDO01000092.1 Protein Homology CDS 104384 105856 . - 0 ID=cds-WP_000249410.1;Parent=gene-AB69_RS09570;Dbxref=GenBank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AB69_RS09570;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 105974 107152 . - . ID=gene-AB69_RS09565;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AB69_RS09565;old_locus_tag=AB69_2725 NZ_JHDO01000092.1 Protein Homology CDS 105974 107152 . - 0 ID=cds-WP_001177048.1;Parent=gene-AB69_RS09565;Dbxref=GenBank:WP_001177048.1;Name=WP_001177048.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AB69_RS09565;product=outer membrane protein assembly factor BamB;protein_id=WP_001177048.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 107163 107783 . - . ID=gene-AB69_RS09560;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AB69_RS09560;old_locus_tag=AB69_2726 NZ_JHDO01000092.1 Protein Homology CDS 107163 107783 . - 0 ID=cds-WP_000409205.1;Parent=gene-AB69_RS09560;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AB69_RS09560;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 107801 109075 . - . ID=gene-AB69_RS09555;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AB69_RS09555;old_locus_tag=AB69_2727 NZ_JHDO01000092.1 Protein Homology CDS 107801 109075 . - 0 ID=cds-WP_001107167.1;Parent=gene-AB69_RS09555;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AB69_RS09555;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 109186 110304 . - . ID=gene-AB69_RS09550;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AB69_RS09550;old_locus_tag=AB69_2728 NZ_JHDO01000092.1 Protein Homology CDS 109186 110304 . - 0 ID=cds-WP_000551807.1;Parent=gene-AB69_RS09550;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AB69_RS09550;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 110331 111344 . - . ID=gene-AB69_RS09545;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AB69_RS09545;old_locus_tag=AB69_2729 NZ_JHDO01000092.1 Protein Homology CDS 110331 111344 . - 0 ID=cds-WP_001090844.1;Parent=gene-AB69_RS09545;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AB69_RS09545;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 111629 112783 . - . ID=gene-AB69_RS09540;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AB69_RS09540;old_locus_tag=AB69_2730 NZ_JHDO01000092.1 Protein Homology CDS 111629 112783 . - 0 ID=cds-WP_000003317.1;Parent=gene-AB69_RS09540;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AB69_RS09540;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 112933 113364 . - . ID=gene-AB69_RS09535;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AB69_RS09535;old_locus_tag=AB69_2731 NZ_JHDO01000092.1 Protein Homology CDS 112933 113364 . - 0 ID=cds-WP_000963837.1;Parent=gene-AB69_RS09535;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AB69_RS09535;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 113513 115825 . - . ID=gene-AB69_RS09530;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AB69_RS09530;old_locus_tag=AB69_2732 NZ_JHDO01000092.1 Protein Homology CDS 113513 115825 . - 0 ID=cds-WP_001137675.1;Parent=gene-AB69_RS09530;Dbxref=GenBank:WP_001137675.1;Name=WP_001137675.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AB69_RS09530;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137675.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 115826 120787 . - . ID=gene-AB69_RS0124770;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=pseudogene;locus_tag=AB69_RS0124770;pseudo=true NZ_JHDO01000092.1 Protein Homology CDS 115826 120787 . - 0 ID=cds-AB69_RS0124770;Parent=gene-AB69_RS0124770;Note=internal stop;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AB69_RS0124770;product=alpha2-macroglobulin;pseudo=true;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 120994 121839 . + . ID=gene-AB69_RS09525;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AB69_RS09525;old_locus_tag=AB69_2735 NZ_JHDO01000092.1 Protein Homology CDS 120994 121839 . + 0 ID=cds-WP_000108626.1;Parent=gene-AB69_RS09525;Dbxref=GenBank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AB69_RS09525;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 122501 122626 . + . ID=gene-AB69_RS30395;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AB69_RS30395;old_locus_tag=AB69_2737 NZ_JHDO01000092.1 Protein Homology CDS 122501 122626 . + 0 ID=cds-WP_001380605.1;Parent=gene-AB69_RS30395;Dbxref=GenBank:WP_001380605.1;Name=WP_001380605.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AB69_RS30395;product=small toxic inner membrane protein TimP;protein_id=WP_001380605.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 122657 123433 . - . ID=gene-AB69_RS09520;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AB69_RS09520;old_locus_tag=AB69_2738 NZ_JHDO01000092.1 Protein Homology CDS 122657 123433 . - 0 ID=cds-WP_001295479.1;Parent=gene-AB69_RS09520;Dbxref=GenBank:WP_001295479.1;Name=WP_001295479.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AB69_RS09520;product=enhanced serine sensitivity protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 123575 124858 . - . ID=gene-AB69_RS09515;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AB69_RS09515;old_locus_tag=AB69_2739 NZ_JHDO01000092.1 Protein Homology CDS 123575 124858 . - 0 ID=cds-WP_000133592.1;Parent=gene-AB69_RS09515;Dbxref=GenBank:WP_000133592.1;Name=WP_000133592.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AB69_RS09515;product=aminopeptidase PepB;protein_id=WP_000133592.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 125036 125236 . - . ID=gene-AB69_RS09510;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AB69_RS09510;old_locus_tag=AB69_2740 NZ_JHDO01000092.1 Protein Homology CDS 125036 125236 . - 0 ID=cds-WP_000523616.1;Parent=gene-AB69_RS09510;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AB69_RS09510;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 125248 125583 . - . ID=gene-AB69_RS09505;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AB69_RS09505;old_locus_tag=AB69_2741 NZ_JHDO01000092.1 Protein Homology CDS 125248 125583 . - 0 ID=cds-WP_001124469.1;Parent=gene-AB69_RS09505;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AB69_RS09505;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 125585 127435 . - . ID=gene-AB69_RS09500;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AB69_RS09500;old_locus_tag=AB69_2742 NZ_JHDO01000092.1 Protein Homology CDS 125585 127435 . - 0 ID=cds-WP_001196613.1;Parent=gene-AB69_RS09500;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AB69_RS09500;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 127452 127967 . - . ID=gene-AB69_RS09495;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AB69_RS09495;old_locus_tag=AB69_2743 NZ_JHDO01000092.1 Protein Homology CDS 127452 127967 . - 0 ID=cds-WP_000384413.1;Parent=gene-AB69_RS09495;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AB69_RS09495;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 127975 128097 . - . ID=gene-AB69_RS30595;Name=AB69_RS30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30595;old_locus_tag=AB69_2744 NZ_JHDO01000092.1 GeneMarkS-2+ CDS 127975 128097 . - 0 ID=cds-WP_000117579.1;Parent=gene-AB69_RS30595;Dbxref=GenBank:WP_000117579.1;Name=WP_000117579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30595;product=hypothetical protein;protein_id=WP_000117579.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 128063 128386 . - . ID=gene-AB69_RS09490;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AB69_RS09490;old_locus_tag=AB69_2745 NZ_JHDO01000092.1 Protein Homology CDS 128063 128386 . - 0 ID=cds-WP_000028953.1;Parent=gene-AB69_RS09490;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AB69_RS09490;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 128403 128789 . - . ID=gene-AB69_RS09485;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AB69_RS09485;old_locus_tag=AB69_2746 NZ_JHDO01000092.1 Protein Homology CDS 128403 128789 . - 0 ID=cds-WP_000331707.1;Parent=gene-AB69_RS09485;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AB69_RS09485;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 128817 130031 . - . ID=gene-AB69_RS09480;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AB69_RS09480;old_locus_tag=AB69_2747 NZ_JHDO01000092.1 Protein Homology CDS 128817 130031 . - 0 ID=cds-WP_001295373.1;Parent=gene-AB69_RS09480;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB69_RS09480;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 130143 130631 . - . ID=gene-AB69_RS09475;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB69_RS09475;old_locus_tag=AB69_2748 NZ_JHDO01000092.1 Protein Homology CDS 130143 130631 . - 0 ID=cds-WP_001241357.1-2;Parent=gene-AB69_RS09475;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB69_RS09475;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 131265 132005 . - . ID=gene-AB69_RS09470;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AB69_RS09470;old_locus_tag=AB69_2749 NZ_JHDO01000092.1 Protein Homology CDS 131265 132005 . - 0 ID=cds-WP_000940019.1;Parent=gene-AB69_RS09470;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AB69_RS09470;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 132124 132927 . + . ID=gene-AB69_RS09465;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AB69_RS09465;old_locus_tag=AB69_2750 NZ_JHDO01000092.1 Protein Homology CDS 132124 132927 . + 0 ID=cds-WP_000553451.1;Parent=gene-AB69_RS09465;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AB69_RS09465;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 133072 133926 . + . ID=gene-AB69_RS09460;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AB69_RS09460;old_locus_tag=AB69_2751 NZ_JHDO01000092.1 Protein Homology CDS 133072 133926 . + 0 ID=cds-WP_001567826.1;Parent=gene-AB69_RS09460;Dbxref=GenBank:WP_001567826.1;Name=WP_001567826.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AB69_RS09460;product=alpha/beta hydrolase;protein_id=WP_001567826.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 134117 135397 . + . ID=gene-AB69_RS09455;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AB69_RS09455;old_locus_tag=AB69_2752 NZ_JHDO01000092.1 Protein Homology CDS 134117 135397 . + 0 ID=cds-WP_000982997.1;Parent=gene-AB69_RS09455;Dbxref=GenBank:WP_000982997.1;Name=WP_000982997.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AB69_RS09455;product=stationary phase inducible protein CsiE;protein_id=WP_000982997.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 135389 136528 . - . ID=gene-AB69_RS09450;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AB69_RS09450;old_locus_tag=AB69_2753 NZ_JHDO01000092.1 Protein Homology CDS 135389 136528 . - 0 ID=cds-WP_032231380.1;Parent=gene-AB69_RS09450;Dbxref=GenBank:WP_032231380.1;Name=WP_032231380.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AB69_RS09450;product=3-phenylpropionate MFS transporter;protein_id=WP_032231380.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 136688 137578 . - . ID=gene-AB69_RS09445;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AB69_RS09445;old_locus_tag=AB69_2754 NZ_JHDO01000092.1 Protein Homology CDS 136688 137578 . - 0 ID=cds-WP_000423263.1;Parent=gene-AB69_RS09445;Dbxref=GenBank:WP_000423263.1;Name=WP_000423263.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311430.1;locus_tag=AB69_RS09445;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423263.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 137714 139075 . + . ID=gene-AB69_RS09440;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AB69_RS09440;old_locus_tag=AB69_2755 NZ_JHDO01000092.1 Protein Homology CDS 137714 139075 . + 0 ID=cds-WP_000211172.1;Parent=gene-AB69_RS09440;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AB69_RS09440;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 139072 139590 . + . ID=gene-AB69_RS09435;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AB69_RS09435;old_locus_tag=AB69_2756 NZ_JHDO01000092.1 Protein Homology CDS 139072 139590 . + 0 ID=cds-WP_001276072.1;Parent=gene-AB69_RS09435;Dbxref=GenBank:WP_001276072.1;Name=WP_001276072.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AB69_RS09435;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 139590 139910 . + . ID=gene-AB69_RS09430;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AB69_RS09430;old_locus_tag=AB69_2757 NZ_JHDO01000092.1 Protein Homology CDS 139590 139910 . + 0 ID=cds-WP_001080102.1;Parent=gene-AB69_RS09430;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AB69_RS09430;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 139907 140719 . + . ID=gene-AB69_RS09425;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AB69_RS09425;old_locus_tag=AB69_2758 NZ_JHDO01000092.1 Protein Homology CDS 139907 140719 . + 0 ID=cds-WP_001281377.1;Parent=gene-AB69_RS09425;Dbxref=GenBank:WP_001281377.1;Name=WP_001281377.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=AB69_RS09425;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281377.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 140729 141931 . + . ID=gene-AB69_RS09420;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AB69_RS09420;old_locus_tag=AB69_2759 NZ_JHDO01000092.1 Protein Homology CDS 140729 141931 . + 0 ID=cds-WP_032231381.1;Parent=gene-AB69_RS09420;Dbxref=GenBank:WP_032231381.1;Name=WP_032231381.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AB69_RS09420;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_032231381.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 142028 142450 . + . ID=gene-AB69_RS09415;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AB69_RS09415;old_locus_tag=AB69_2760 NZ_JHDO01000092.1 Protein Homology CDS 142028 142450 . + 0 ID=cds-WP_001094726.1;Parent=gene-AB69_RS09415;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AB69_RS09415;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 142498 143370 . - . ID=gene-AB69_RS09410;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AB69_RS09410;old_locus_tag=AB69_2761 NZ_JHDO01000092.1 Protein Homology CDS 142498 143370 . - 0 ID=cds-WP_000158537.1;Parent=gene-AB69_RS09410;Dbxref=GenBank:WP_000158537.1;Name=WP_000158537.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AB69_RS09410;product=aldose 1-epimerase;protein_id=WP_000158537.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 143382 144476 . - . ID=gene-AB69_RS09405;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AB69_RS09405;old_locus_tag=AB69_2762 NZ_JHDO01000092.1 Protein Homology CDS 143382 144476 . - 0 ID=cds-WP_000700809.1;Parent=gene-AB69_RS09405;Dbxref=GenBank:WP_000700809.1;Name=WP_000700809.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AB69_RS09405;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700809.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 144509 145507 . - . ID=gene-AB69_RS09400;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AB69_RS09400;old_locus_tag=AB69_2763 NZ_JHDO01000092.1 Protein Homology CDS 144509 145507 . - 0 ID=cds-WP_032231382.1;Parent=gene-AB69_RS09400;Dbxref=GenBank:WP_032231382.1;Name=WP_032231382.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311439.1;locus_tag=AB69_RS09400;product=ABC transporter permease;protein_id=WP_032231382.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 145532 147043 . - . ID=gene-AB69_RS09395;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AB69_RS09395;old_locus_tag=AB69_2764 NZ_JHDO01000092.1 Protein Homology CDS 145532 147043 . - 0 ID=cds-WP_032235695.1;Parent=gene-AB69_RS09395;Dbxref=GenBank:WP_032235695.1;Name=WP_032235695.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708385.1;locus_tag=AB69_RS09395;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032235695.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 147066 148049 . - . ID=gene-AB69_RS09390;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AB69_RS09390;old_locus_tag=AB69_2765 NZ_JHDO01000092.1 Protein Homology CDS 147066 148049 . - 0 ID=cds-WP_001124894.1;Parent=gene-AB69_RS09390;Dbxref=GenBank:WP_001124894.1;Name=WP_001124894.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AB69_RS09390;product=substrate-binding domain-containing protein;protein_id=WP_001124894.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 148146 151427 . - . ID=gene-AB69_RS09385;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AB69_RS09385;old_locus_tag=AB69_2766 NZ_JHDO01000092.1 Protein Homology CDS 148146 151427 . - 0 ID=cds-WP_001544029.1;Parent=gene-AB69_RS09385;Dbxref=GenBank:WP_001544029.1;Name=WP_001544029.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AB69_RS09385;product=DUF5107 domain-containing protein;protein_id=WP_001544029.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 151545 152738 . + . ID=gene-AB69_RS09380;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AB69_RS09380;old_locus_tag=AB69_2767 NZ_JHDO01000092.1 Protein Homology CDS 151545 152738 . + 0 ID=cds-WP_001200766.1;Parent=gene-AB69_RS09380;Dbxref=GenBank:WP_001200766.1;Name=WP_001200766.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AB69_RS09380;product=ROK family protein;protein_id=WP_001200766.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 152936 154189 . - . ID=gene-AB69_RS09375;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AB69_RS09375;old_locus_tag=AB69_2768 NZ_JHDO01000092.1 Protein Homology CDS 152936 154189 . - 0 ID=cds-WP_000919159.1;Parent=gene-AB69_RS09375;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AB69_RS09375;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 154517 155707 . + . ID=gene-AB69_RS09370;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AB69_RS09370;old_locus_tag=AB69_2769 NZ_JHDO01000092.1 Protein Homology CDS 154517 155707 . + 0 ID=cds-WP_001400843.1;Parent=gene-AB69_RS09370;Dbxref=GenBank:WP_001400843.1;Name=WP_001400843.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AB69_RS09370;product=NO-inducible flavohemoprotein;protein_id=WP_001400843.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 155752 156090 . - . ID=gene-AB69_RS09365;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AB69_RS09365;old_locus_tag=AB69_2770 NZ_JHDO01000092.1 Protein Homology CDS 155752 156090 . - 0 ID=cds-WP_000717691.1;Parent=gene-AB69_RS09365;Dbxref=GenBank:WP_000717691.1;Name=WP_000717691.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AB69_RS09365;product=nitrogen regulatory protein P-II;protein_id=WP_000717691.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 156151 157485 . - . ID=gene-AB69_RS09360;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AB69_RS09360;old_locus_tag=AB69_2771 NZ_JHDO01000092.1 Protein Homology CDS 156151 157485 . - 0 ID=cds-WP_001295369.1;Parent=gene-AB69_RS09360;Dbxref=GenBank:WP_001295369.1;Name=WP_001295369.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AB69_RS09360;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 157475 158188 . - . ID=gene-AB69_RS09355;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AB69_RS09355;old_locus_tag=AB69_2772 NZ_JHDO01000092.1 Protein Homology CDS 157475 158188 . - 0 ID=cds-WP_001215861.1;Parent=gene-AB69_RS09355;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AB69_RS09355;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 158353 159780 . - . ID=gene-AB69_RS09350;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AB69_RS09350;old_locus_tag=AB69_2773 NZ_JHDO01000092.1 Protein Homology CDS 158353 159780 . - 0 ID=cds-WP_001311037.1;Parent=gene-AB69_RS09350;Dbxref=GenBank:WP_001311037.1;Name=WP_001311037.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AB69_RS09350;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001311037.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 160338 164225 . - . ID=gene-AB69_RS09345;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AB69_RS09345;old_locus_tag=AB69_2774 NZ_JHDO01000092.1 Protein Homology CDS 160338 164225 . - 0 ID=cds-WP_000970102.1;Parent=gene-AB69_RS09345;Dbxref=GenBank:WP_000970102.1;Name=WP_000970102.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026170.1;locus_tag=AB69_RS09345;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970102.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 164483 166039 . + . ID=gene-AB69_RS09340;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AB69_RS09340;old_locus_tag=AB69_2775 NZ_JHDO01000092.1 Protein Homology CDS 164483 166039 . + 0 ID=cds-WP_000734212.1;Parent=gene-AB69_RS09340;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AB69_RS09340;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 166036 166539 . - . ID=gene-AB69_RS09335;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AB69_RS09335;old_locus_tag=AB69_2776 NZ_JHDO01000092.1 Protein Homology CDS 166036 166539 . - 0 ID=cds-WP_001297409.1;Parent=gene-AB69_RS09335;Dbxref=GenBank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AB69_RS09335;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 166597 167232 . - . ID=gene-AB69_RS09330;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AB69_RS09330;old_locus_tag=AB69_2777 NZ_JHDO01000092.1 Protein Homology CDS 166597 167232 . - 0 ID=cds-WP_000190655.1;Parent=gene-AB69_RS09330;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AB69_RS09330;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 167441 168289 . + . ID=gene-AB69_RS09325;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AB69_RS09325;old_locus_tag=AB69_2778 NZ_JHDO01000092.1 Protein Homology CDS 167441 168289 . + 0 ID=cds-WP_001013779.1;Parent=gene-AB69_RS09325;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AB69_RS09325;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 168345 168605 . + . ID=gene-AB69_RS0124775;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AB69_RS0124775;old_locus_tag=AB69_2779 NZ_JHDO01000092.1 Protein Homology CDS 168345 168605 . + 0 ID=cds-WP_001196283.1;Parent=gene-AB69_RS0124775;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AB69_RS0124775;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 168799 168879 . - . ID=gene-AB69_RS0124780;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AB69_RS0124780 NZ_JHDO01000092.1 Protein Homology CDS 168799 168879 . - 0 ID=cds-WP_000128776.1;Parent=gene-AB69_RS0124780;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AB69_RS0124780;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 169300 169680 . - . ID=gene-AB69_RS09320;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AB69_RS09320;old_locus_tag=AB69_2780 NZ_JHDO01000092.1 Protein Homology CDS 169300 169680 . - 0 ID=cds-WP_000986023.1;Parent=gene-AB69_RS09320;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AB69_RS09320;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 169680 170411 . - . ID=gene-AB69_RS09315;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AB69_RS09315;old_locus_tag=AB69_2781 NZ_JHDO01000092.1 Protein Homology CDS 169680 170411 . - 0 ID=cds-WP_001297412.1;Parent=gene-AB69_RS09315;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AB69_RS09315;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 170423 171151 . - . ID=gene-AB69_RS09310;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AB69_RS09310;old_locus_tag=AB69_2782 NZ_JHDO01000092.1 Protein Homology CDS 170423 171151 . - 0 ID=cds-WP_000399404.1;Parent=gene-AB69_RS09310;Dbxref=GenBank:WP_000399404.1;Name=WP_000399404.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AB69_RS09310;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 171163 172068 . - . ID=gene-AB69_RS09305;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AB69_RS09305;old_locus_tag=AB69_2783 NZ_JHDO01000092.1 Protein Homology CDS 171163 172068 . - 0 ID=cds-WP_000020749.1;Parent=gene-AB69_RS09305;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AB69_RS09305;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 172065 172745 . - . ID=gene-AB69_RS09300;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AB69_RS09300;old_locus_tag=AB69_2784 NZ_JHDO01000092.1 Protein Homology CDS 172065 172745 . - 0 ID=cds-WP_001068343.1;Parent=gene-AB69_RS09300;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AB69_RS09300;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 173017 173991 . - . ID=gene-AB69_RS09295;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AB69_RS09295;old_locus_tag=AB69_2785 NZ_JHDO01000092.1 Protein Homology CDS 173017 173991 . - 0 ID=cds-WP_000002541.1;Parent=gene-AB69_RS09295;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AB69_RS09295;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 174007 175806 . - . ID=gene-AB69_RS09290;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AB69_RS09290;old_locus_tag=AB69_2786 NZ_JHDO01000092.1 Protein Homology CDS 174007 175806 . - 0 ID=cds-WP_000790168.1;Parent=gene-AB69_RS09290;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AB69_RS09290;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 176004 176483 . - . ID=gene-AB69_RS09285;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AB69_RS09285;old_locus_tag=AB69_2787 NZ_JHDO01000092.1 Protein Homology CDS 176004 176483 . - 0 ID=cds-WP_000589068.1;Parent=gene-AB69_RS09285;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AB69_RS09285;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 176480 177436 . - . ID=gene-AB69_RS09280;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AB69_RS09280;old_locus_tag=AB69_2788 NZ_JHDO01000092.1 Protein Homology CDS 176480 177436 . - 0 ID=cds-WP_000812053.1;Parent=gene-AB69_RS09280;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AB69_RS09280;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 177436 178086 . - . ID=gene-AB69_RS09275;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AB69_RS09275;old_locus_tag=AB69_2789 NZ_JHDO01000092.1 Protein Homology CDS 177436 178086 . - 0 ID=cds-WP_001168459.1;Parent=gene-AB69_RS09275;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AB69_RS09275;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 178119 178694 . - . ID=gene-AB69_RS09270;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AB69_RS09270;old_locus_tag=AB69_2790 NZ_JHDO01000092.1 Protein Homology CDS 178119 178694 . - 0 ID=cds-WP_001295364.1;Parent=gene-AB69_RS09270;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AB69_RS09270;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 178691 178846 . - . ID=gene-AB69_RS29830;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AB69_RS29830 NZ_JHDO01000092.1 Protein Homology CDS 178691 178846 . - 0 ID=cds-WP_001303621.1;Parent=gene-AB69_RS29830;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AB69_RS29830;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 179102 180724 . + . ID=gene-AB69_RS09265;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AB69_RS09265;old_locus_tag=AB69_2791 NZ_JHDO01000092.1 Protein Homology CDS 179102 180724 . + 0 ID=cds-WP_001094491.1;Parent=gene-AB69_RS09265;Dbxref=GenBank:WP_001094491.1;Name=WP_001094491.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AB69_RS09265;product=L-aspartate oxidase;protein_id=WP_001094491.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 180709 181446 . - . ID=gene-AB69_RS09260;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AB69_RS09260;old_locus_tag=AB69_2792 NZ_JHDO01000092.1 Protein Homology CDS 180709 181446 . - 0 ID=cds-WP_001295363.1;Parent=gene-AB69_RS09260;Dbxref=GenBank:WP_001295363.1;Name=WP_001295363.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AB69_RS09260;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001295363.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 181578 182912 . + . ID=gene-AB69_RS09255;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AB69_RS09255;old_locus_tag=AB69_2793 NZ_JHDO01000092.1 Protein Homology CDS 181578 182912 . + 0 ID=cds-WP_000219186.1;Parent=gene-AB69_RS09255;Dbxref=GenBank:WP_000219186.1;Name=WP_000219186.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AB69_RS09255;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219186.1;transl_table=11 NZ_JHDO01000092.1 RefSeq pseudogene 183121 184002 . - . ID=gene-AB69_RS09250;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=pseudogene;locus_tag=AB69_RS09250;old_locus_tag=AB69_2794;pseudo=true NZ_JHDO01000092.1 Protein Homology CDS 183121 184002 . - 0 ID=cds-AB69_RS09250;Parent=gene-AB69_RS09250;Note=internal stop;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AB69_RS09250;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 184105 184692 . + . ID=gene-AB69_RS09245;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AB69_RS09245;old_locus_tag=AB69_2796 NZ_JHDO01000092.1 Protein Homology CDS 184105 184692 . + 0 ID=cds-WP_000189207.1;Parent=gene-AB69_RS09245;Dbxref=GenBank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AB69_RS09245;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 184748 185131 . - . ID=gene-AB69_RS09240;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AB69_RS09240;old_locus_tag=AB69_2797 NZ_JHDO01000092.1 Protein Homology CDS 184748 185131 . - 0 ID=cds-WP_000627807.1;Parent=gene-AB69_RS09240;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AB69_RS09240;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 185436 186125 . + . ID=gene-AB69_RS09235;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AB69_RS09235;old_locus_tag=AB69_2798 NZ_JHDO01000092.1 Protein Homology CDS 185436 186125 . + 0 ID=cds-WP_001262716.1;Parent=gene-AB69_RS09235;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AB69_RS09235;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 186173 187210 . - . ID=gene-AB69_RS09230;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AB69_RS09230;old_locus_tag=AB69_2799 NZ_JHDO01000092.1 Protein Homology CDS 186173 187210 . - 0 ID=cds-WP_000997403.1;Parent=gene-AB69_RS09230;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AB69_RS09230;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 187417 187836 . + . ID=gene-AB69_RS09225;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AB69_RS09225;old_locus_tag=AB69_2800 NZ_JHDO01000092.1 Protein Homology CDS 187417 187836 . + 0 ID=cds-WP_001098726.1;Parent=gene-AB69_RS09225;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AB69_RS09225;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 187905 188603 . + . ID=gene-AB69_RS09220;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AB69_RS09220;old_locus_tag=AB69_2801 NZ_JHDO01000092.1 Protein Homology CDS 187905 188603 . + 0 ID=cds-WP_001300438.1;Parent=gene-AB69_RS09220;Dbxref=GenBank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AB69_RS09220;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001300438.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 188635 191295 . + . ID=gene-AB69_RS09215;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AB69_RS09215;old_locus_tag=AB69_2802 NZ_JHDO01000092.1 Protein Homology CDS 188635 191295 . + 0 ID=cds-WP_000083005.1;Parent=gene-AB69_RS09215;Dbxref=GenBank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AB69_RS09215;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000083005.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 191409 192764 . + . ID=gene-AB69_RS09210;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AB69_RS09210;old_locus_tag=AB69_2803 NZ_JHDO01000092.1 Protein Homology CDS 191409 192764 . + 0 ID=cds-WP_000949265.1;Parent=gene-AB69_RS09210;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AB69_RS09210;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 192810 193133 . + . ID=gene-AB69_RS09205;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AB69_RS09205;old_locus_tag=AB69_2804 NZ_JHDO01000092.1 Protein Homology CDS 192810 193133 . + 0 ID=cds-WP_001300818.1;Parent=gene-AB69_RS09205;Dbxref=GenBank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AB69_RS09205;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 193130 194428 . - . ID=gene-AB69_RS09200;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AB69_RS09200;old_locus_tag=AB69_2805 NZ_JHDO01000092.1 Protein Homology CDS 193130 194428 . - 0 ID=cds-WP_000841103.1;Parent=gene-AB69_RS09200;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AB69_RS09200;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JHDO01000092.1 RefSeq gene 194754 194869 . - . ID=gene-AB69_RS09195;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS09195;old_locus_tag=AB69_2806 NZ_JHDO01000092.1 cmsearch rRNA 194754 194869 . - . ID=rna-AB69_RS09195;Parent=gene-AB69_RS09195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS09195;product=5S ribosomal RNA NZ_JHDO01000092.1 cmsearch exon 194754 194869 . - . ID=exon-AB69_RS09195-1;Parent=rna-AB69_RS09195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS09195;product=5S ribosomal RNA NZ_JHDO01000092.1 RefSeq gene 194964 196131 . - . ID=gene-AB69_RS09190;Name=AB69_RS09190;end_range=196131,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS09190;old_locus_tag=AB69_2807;partial=true NZ_JHDO01000092.1 cmsearch rRNA 194964 196131 . - . ID=rna-AB69_RS09190;Parent=gene-AB69_RS09190;Dbxref=RFAM:RF02541;end_range=196131,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS09190;partial=true;product=23S ribosomal RNA NZ_JHDO01000092.1 cmsearch exon 194964 196131 . - . ID=exon-AB69_RS09190-1;Parent=rna-AB69_RS09190;Dbxref=RFAM:RF02541;end_range=196131,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS09190;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDO01000093.1 1 732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000093.1 RefSeq region 1 732 . + . ID=NZ_JHDO01000093.1:1..732;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000093.1 RefSeq gene 1 129 . - . ID=gene-AB69_RS0124815;Name=AB69_RS0124815;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0124815;partial=true;start_range=.,1 NZ_JHDO01000093.1 cmsearch rRNA 1 129 . - . ID=rna-AB69_RS0124815;Parent=gene-AB69_RS0124815;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124815;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000093.1 cmsearch exon 1 129 . - . ID=exon-AB69_RS0124815-1;Parent=rna-AB69_RS0124815;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124815;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000093.1 RefSeq gene 314 389 . - . ID=gene-AB69_RS09185;Name=AB69_RS09185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS09185;old_locus_tag=AB69_2809 NZ_JHDO01000093.1 tRNAscan-SE tRNA 314 389 . - . ID=rna-AB69_RS09185;Parent=gene-AB69_RS09185;anticodon=(pos:complement(353..355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS09185;product=tRNA-Glu NZ_JHDO01000093.1 tRNAscan-SE exon 314 389 . - . ID=exon-AB69_RS09185-1;Parent=rna-AB69_RS09185;anticodon=(pos:complement(353..355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS09185;product=tRNA-Glu NZ_JHDO01000093.1 RefSeq gene 561 732 . - . ID=gene-AB69_RS0124820;Name=AB69_RS0124820;end_range=732,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0124820;old_locus_tag=AB69_2810;partial=true NZ_JHDO01000093.1 cmsearch rRNA 561 732 . - . ID=rna-AB69_RS0124820;Parent=gene-AB69_RS0124820;Dbxref=RFAM:RF00177;end_range=732,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124820;partial=true;product=16S ribosomal RNA NZ_JHDO01000093.1 cmsearch exon 561 732 . - . ID=exon-AB69_RS0124820-1;Parent=rna-AB69_RS0124820;Dbxref=RFAM:RF00177;end_range=732,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124820;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000094.1 1 11882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000094.1 RefSeq region 1 11882 . + . ID=NZ_JHDO01000094.1:1..11882;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000094.1 RefSeq gene 1 947 . - . ID=gene-AB69_RS0124825;Name=AB69_RS0124825;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0124825;partial=true;start_range=.,1 NZ_JHDO01000094.1 cmsearch rRNA 1 947 . - . ID=rna-AB69_RS0124825;Parent=gene-AB69_RS0124825;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124825;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000094.1 cmsearch exon 1 947 . - . ID=exon-AB69_RS0124825-1;Parent=rna-AB69_RS0124825;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0124825;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000094.1 RefSeq gene 1390 3963 . - . ID=gene-AB69_RS09180;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AB69_RS09180;old_locus_tag=AB69_2812 NZ_JHDO01000094.1 Protein Homology CDS 1390 3963 . - 0 ID=cds-WP_001235102.1;Parent=gene-AB69_RS09180;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AB69_RS09180;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 4093 4824 . - . ID=gene-AB69_RS09175;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AB69_RS09175;old_locus_tag=AB69_2813 NZ_JHDO01000094.1 Protein Homology CDS 4093 4824 . - 0 ID=cds-WP_032231390.1;Parent=gene-AB69_RS09175;Dbxref=GenBank:WP_032231390.1;Name=WP_032231390.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AB69_RS09175;product=purine nucleoside phosphorylase YfiH;protein_id=WP_032231390.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 4821 5801 . - . ID=gene-AB69_RS09170;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AB69_RS09170;old_locus_tag=AB69_2814 NZ_JHDO01000094.1 Protein Homology CDS 4821 5801 . - 0 ID=cds-WP_000079100.1;Parent=gene-AB69_RS09170;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AB69_RS09170;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 5936 6673 . + . ID=gene-AB69_RS09165;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AB69_RS09165;old_locus_tag=AB69_2815 NZ_JHDO01000094.1 Protein Homology CDS 5936 6673 . + 0 ID=cds-WP_000197686.1;Parent=gene-AB69_RS09165;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AB69_RS09165;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 6944 7285 . + . ID=gene-AB69_RS09160;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AB69_RS09160;old_locus_tag=AB69_2816 NZ_JHDO01000094.1 Protein Homology CDS 6944 7285 . + 0 ID=cds-WP_000178456.1;Parent=gene-AB69_RS09160;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AB69_RS09160;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JHDO01000094.1 cmsearch sequence_feature 7388 7513 . + . ID=id-NZ_JHDO01000094.1:7388..7513;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000094.1 RefSeq gene 7389 7436 . + . ID=gene-AB69_RS29420;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AB69_RS29420 NZ_JHDO01000094.1 Protein Homology CDS 7389 7436 . + 0 ID=cds-WP_010723158.1;Parent=gene-AB69_RS29420;Dbxref=GenBank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AB69_RS29420;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 7535 8695 . + . ID=gene-AB69_RS09155;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AB69_RS09155;old_locus_tag=AB69_2817 NZ_JHDO01000094.1 Protein Homology CDS 7535 8695 . + 0 ID=cds-WP_000200120.1;Parent=gene-AB69_RS09155;Dbxref=GenBank:WP_000200120.1;Name=WP_000200120.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AB69_RS09155;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200120.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 8738 9859 . - . ID=gene-AB69_RS09150;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AB69_RS09150;old_locus_tag=AB69_2818 NZ_JHDO01000094.1 Protein Homology CDS 8738 9859 . - 0 ID=cds-WP_000225229.1;Parent=gene-AB69_RS09150;Dbxref=GenBank:WP_000225229.1;Name=WP_000225229.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417091.1;locus_tag=AB69_RS09150;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225229.1;transl_table=11 NZ_JHDO01000094.1 RefSeq gene 9870 10940 . - . ID=gene-AB69_RS09145;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AB69_RS09145;old_locus_tag=AB69_2819 NZ_JHDO01000094.1 Protein Homology CDS 9870 10940 . - 0 ID=cds-WP_001168037.1;Parent=gene-AB69_RS09145;Dbxref=GenBank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AB69_RS09145;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11 NZ_JHDO01000094.1 RefSeq pseudogene 11150 11275 . + . ID=gene-AB69_RS29835;Name=AB69_RS29835;end_range=11275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29835;old_locus_tag=AB69_2820;partial=true;pseudo=true NZ_JHDO01000094.1 Protein Homology CDS 11150 11275 . + 0 ID=cds-AB69_RS29835;Parent=gene-AB69_RS29835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708451.2;locus_tag=AB69_RS29835;partial=true;product=DUF2799 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000094.1 RefSeq pseudogene 11327 11882 . + . ID=gene-AB69_RS09135;Name=AB69_RS09135;end_range=11882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS09135;old_locus_tag=AB69_2821;partial=true;pseudo=true NZ_JHDO01000094.1 Protein Homology CDS 11327 11882 . + 0 ID=cds-AB69_RS09135;Parent=gene-AB69_RS09135;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=11882,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS09135;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000095.1 1 20568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000095.1 RefSeq region 1 20568 . + . ID=NZ_JHDO01000095.1:1..20568;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000095.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS09130;Name=AB69_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09130;old_locus_tag=AB69_2822 NZ_JHDO01000095.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-10;Parent=gene-AB69_RS09130;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS09130;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000095.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-10;Parent=gene-AB69_RS09130;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS09130;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 747 1976 . + . ID=gene-AB69_RS09125;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AB69_RS09125;old_locus_tag=AB69_2823 NZ_JHDO01000095.1 Protein Homology CDS 747 1976 . + 0 ID=cds-WP_032231395.1;Parent=gene-AB69_RS09125;Dbxref=GenBank:WP_032231395.1;Name=WP_032231395.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AB69_RS09125;product=diguanylate cyclase DgcN;protein_id=WP_032231395.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 1992 2474 . + . ID=gene-AB69_RS0124835;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AB69_RS0124835;old_locus_tag=AB69_2824 NZ_JHDO01000095.1 Protein Homology CDS 1992 2474 . + 0 ID=cds-WP_000589847.1;Parent=gene-AB69_RS0124835;Dbxref=GenBank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AB69_RS0124835;product=OmpA family protein;protein_id=WP_000589847.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 2550 2897 . - . ID=gene-AB69_RS09120;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AB69_RS09120;old_locus_tag=AB69_2825 NZ_JHDO01000095.1 Protein Homology CDS 2550 2897 . - 0 ID=cds-WP_000065253.1;Parent=gene-AB69_RS09120;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AB69_RS09120;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 2939 3706 . - . ID=gene-AB69_RS09115;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AB69_RS09115;old_locus_tag=AB69_2826 NZ_JHDO01000095.1 Protein Homology CDS 2939 3706 . - 0 ID=cds-WP_000264777.1;Parent=gene-AB69_RS09115;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AB69_RS09115;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 3737 4285 . - . ID=gene-AB69_RS09110;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AB69_RS09110;old_locus_tag=AB69_2827 NZ_JHDO01000095.1 Protein Homology CDS 3737 4285 . - 0 ID=cds-WP_000043335.1;Parent=gene-AB69_RS09110;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AB69_RS09110;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 4304 4552 . - . ID=gene-AB69_RS09105;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AB69_RS09105;old_locus_tag=AB69_2828 NZ_JHDO01000095.1 Protein Homology CDS 4304 4552 . - 0 ID=cds-WP_000256450.1;Parent=gene-AB69_RS09105;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AB69_RS09105;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 4801 6162 . - . ID=gene-AB69_RS09100;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AB69_RS09100;old_locus_tag=AB69_2829 NZ_JHDO01000095.1 Protein Homology CDS 4801 6162 . - 0 ID=cds-WP_000460035.1;Parent=gene-AB69_RS09100;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AB69_RS09100;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 6329 7120 . + . ID=gene-AB69_RS09095;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AB69_RS09095;old_locus_tag=AB69_2830 NZ_JHDO01000095.1 Protein Homology CDS 6329 7120 . + 0 ID=cds-WP_032231397.1;Parent=gene-AB69_RS09095;Dbxref=GenBank:WP_032231397.1;Name=WP_032231397.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AB69_RS09095;product=cytochrome C assembly family protein;protein_id=WP_032231397.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 7141 8427 . + . ID=gene-AB69_RS09090;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AB69_RS09090;old_locus_tag=AB69_2831 NZ_JHDO01000095.1 Protein Homology CDS 7141 8427 . + 0 ID=cds-WP_010723175.1;Parent=gene-AB69_RS09090;Dbxref=GenBank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AB69_RS09090;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 8482 9075 . - . ID=gene-AB69_RS09085;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AB69_RS09085;old_locus_tag=AB69_2832 NZ_JHDO01000095.1 Protein Homology CDS 8482 9075 . - 0 ID=cds-WP_001296310.1;Parent=gene-AB69_RS09085;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AB69_RS09085;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 9198 10076 . + . ID=gene-AB69_RS09080;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AB69_RS09080;old_locus_tag=AB69_2834 NZ_JHDO01000095.1 Protein Homology CDS 9198 10076 . + 0 ID=cds-WP_001059169.1;Parent=gene-AB69_RS09080;Dbxref=GenBank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AB69_RS09080;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 10162 11823 . + . ID=gene-AB69_RS09075;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AB69_RS09075;old_locus_tag=AB69_2835 NZ_JHDO01000095.1 Protein Homology CDS 10162 11823 . + 0 ID=cds-WP_000880910.1;Parent=gene-AB69_RS09075;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AB69_RS09075;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 11972 12313 . + . ID=gene-AB69_RS09070;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AB69_RS09070;old_locus_tag=AB69_2836 NZ_JHDO01000095.1 Protein Homology CDS 11972 12313 . + 0 ID=cds-WP_001203437.1;Parent=gene-AB69_RS09070;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AB69_RS09070;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 12375 12665 . - . ID=gene-AB69_RS09065;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AB69_RS09065;old_locus_tag=AB69_2837 NZ_JHDO01000095.1 Protein Homology CDS 12375 12665 . - 0 ID=cds-WP_032231396.1;Parent=gene-AB69_RS09065;Dbxref=GenBank:WP_032231396.1;Name=WP_032231396.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AB69_RS09065;product=RnfH family protein;protein_id=WP_032231396.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 12655 13092 . - . ID=gene-AB69_RS09060;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AB69_RS09060;old_locus_tag=AB69_2838 NZ_JHDO01000095.1 Protein Homology CDS 12655 13092 . - 0 ID=cds-WP_001300750.1;Parent=gene-AB69_RS09060;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AB69_RS09060;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 13263 13745 . + . ID=gene-AB69_RS09055;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AB69_RS09055;old_locus_tag=AB69_2839 NZ_JHDO01000095.1 Protein Homology CDS 13263 13745 . + 0 ID=cds-WP_000162574.1;Parent=gene-AB69_RS09055;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AB69_RS09055;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 13960 14322 . + . ID=gene-AB69_RS25785;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AB69_RS25785 NZ_JHDO01000095.1 cmsearch tmRNA 13960 14322 . + . ID=rna-AB69_RS25785;Parent=gene-AB69_RS25785;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25785;product=transfer-messenger RNA NZ_JHDO01000095.1 cmsearch exon 13960 14322 . + . ID=exon-AB69_RS25785-1;Parent=rna-AB69_RS25785;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25785;product=transfer-messenger RNA NZ_JHDO01000095.1 RefSeq gene 14489 15718 . + . ID=gene-AB69_RS09050;Name=AB69_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09050;old_locus_tag=AB69_2840 NZ_JHDO01000095.1 Protein Homology CDS 14489 15718 . + 0 ID=cds-WP_001384082.1;Parent=gene-AB69_RS09050;Dbxref=GenBank:WP_001384082.1;Name=WP_001384082.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341819.1;locus_tag=AB69_RS09050;product=integrase domain-containing protein;protein_id=WP_001384082.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 16001 17557 . + . ID=gene-AB69_RS09045;Name=AB69_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09045;old_locus_tag=AB69_2841 NZ_JHDO01000095.1 Protein Homology CDS 16001 17557 . + 0 ID=cds-WP_000146253.1;Parent=gene-AB69_RS09045;Dbxref=GenBank:WP_000146253.1;Name=WP_000146253.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135616.1;locus_tag=AB69_RS09045;product=recombinase family protein;protein_id=WP_000146253.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 17547 18443 . + . ID=gene-AB69_RS09040;Name=AB69_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09040;old_locus_tag=AB69_2842 NZ_JHDO01000095.1 Protein Homology CDS 17547 18443 . + 0 ID=cds-WP_000936463.1;Parent=gene-AB69_RS09040;Dbxref=GenBank:WP_000936463.1;Name=WP_000936463.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936491.1;locus_tag=AB69_RS09040;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000936463.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 18440 19336 . + . ID=gene-AB69_RS09035;Name=AB69_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09035;old_locus_tag=AB69_2843 NZ_JHDO01000095.1 Protein Homology CDS 18440 19336 . + 0 ID=cds-WP_000614786.1;Parent=gene-AB69_RS09035;Dbxref=GenBank:WP_000614786.1;Name=WP_000614786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502509.1;locus_tag=AB69_RS09035;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000614786.1;transl_table=11 NZ_JHDO01000095.1 RefSeq gene 19824 20521 . - . ID=gene-AB69_RS09030;Name=AB69_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS09030;old_locus_tag=AB69_2844 NZ_JHDO01000095.1 Protein Homology CDS 20272 20521 . - 0 ID=cds-WP_094096600.1-11;Parent=gene-AB69_RS09030;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS09030;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000095.1 Protein Homology CDS 19824 20272 . - 2 ID=cds-WP_094096600.1-11;Parent=gene-AB69_RS09030;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS09030;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JHDO01000096.1 1 96786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000096.1 RefSeq region 1 96786 . + . ID=NZ_JHDO01000096.1:1..96786;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000096.1 RefSeq pseudogene 1 553 . - . ID=gene-AB69_RS28855;Name=AB69_RS28855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28855;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000096.1 Protein Homology CDS 1 553 . - 0 ID=cds-AB69_RS28855;Parent=gene-AB69_RS28855;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28855;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000096.1 RefSeq pseudogene 656 2029 . - . ID=gene-AB69_RS29840;Name=ypjCB;gbkey=Gene;gene=ypjCB;gene_biotype=pseudogene;locus_tag=AB69_RS29840;pseudo=true NZ_JHDO01000096.1 Protein Homology CDS 656 2029 . - 0 ID=cds-AB69_RS29840;Parent=gene-AB69_RS29840;Note=internal stop;gbkey=CDS;gene=ypjCB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=AB69_RS29840;product=YpjCB family protein;pseudo=true;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 2780 2855 . - . ID=gene-AB69_RS09015;Name=AB69_RS09015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS09015;old_locus_tag=AB69_2848 NZ_JHDO01000096.1 tRNAscan-SE tRNA 2780 2855 . - . ID=rna-AB69_RS09015;Parent=gene-AB69_RS09015;anticodon=(pos:complement(2820..2822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS09015;product=tRNA-Ile NZ_JHDO01000096.1 tRNAscan-SE exon 2780 2855 . - . ID=exon-AB69_RS09015-1;Parent=rna-AB69_RS09015;anticodon=(pos:complement(2820..2822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS09015;product=tRNA-Ile NZ_JHDO01000096.1 RefSeq pseudogene 3415 5667 . + . ID=gene-AB69_RS30025;Name=AB69_RS30025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30025;pseudo=true NZ_JHDO01000096.1 Protein Homology CDS 3415 5667 . + 0 ID=cds-AB69_RS30025;Parent=gene-AB69_RS30025;Note=internal stop;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AB69_RS30025;product=alpha amylase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 6003 6980 . + . ID=gene-AB69_RS09005;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AB69_RS09005;old_locus_tag=AB69_2852 NZ_JHDO01000096.1 Protein Homology CDS 6003 6980 . + 0 ID=cds-WP_000993126.1;Parent=gene-AB69_RS09005;Dbxref=GenBank:WP_000993126.1;Name=WP_000993126.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=AB69_RS09005;product=glutarate dioxygenase GlaH;protein_id=WP_000993126.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 7000 8268 . + . ID=gene-AB69_RS09000;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AB69_RS09000;old_locus_tag=AB69_2853 NZ_JHDO01000096.1 Protein Homology CDS 7000 8268 . + 0 ID=cds-WP_000271951.1;Parent=gene-AB69_RS09000;Dbxref=GenBank:WP_000271951.1;Name=WP_000271951.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417146.2;locus_tag=AB69_RS09000;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271951.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 8291 9739 . + . ID=gene-AB69_RS08995;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AB69_RS08995;old_locus_tag=AB69_2854 NZ_JHDO01000096.1 Protein Homology CDS 8291 9739 . + 0 ID=cds-WP_000772831.1;Parent=gene-AB69_RS08995;Dbxref=GenBank:WP_000772831.1;Name=WP_000772831.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417147.1;locus_tag=AB69_RS08995;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772831.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 9753 11033 . + . ID=gene-AB69_RS08990;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AB69_RS08990;old_locus_tag=AB69_2855 NZ_JHDO01000096.1 Protein Homology CDS 9753 11033 . + 0 ID=cds-WP_032179236.1;Parent=gene-AB69_RS08990;Dbxref=GenBank:WP_032179236.1;Name=WP_032179236.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417148.1;locus_tag=AB69_RS08990;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032179236.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 11271 12671 . + . ID=gene-AB69_RS08985;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AB69_RS08985;old_locus_tag=AB69_2856 NZ_JHDO01000096.1 Protein Homology CDS 11271 12671 . + 0 ID=cds-WP_001295173.1;Parent=gene-AB69_RS08985;Dbxref=GenBank:WP_001295173.1;Name=WP_001295173.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=AB69_RS08985;product=GABA permease;protein_id=WP_001295173.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 12692 13354 . + . ID=gene-AB69_RS08980;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AB69_RS08980;old_locus_tag=AB69_2857 NZ_JHDO01000096.1 Protein Homology CDS 12692 13354 . + 0 ID=cds-WP_000156811.1;Parent=gene-AB69_RS08980;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AB69_RS08980;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 13355 13804 . - . ID=gene-AB69_RS08975;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AB69_RS08975;old_locus_tag=AB69_2858 NZ_JHDO01000096.1 Protein Homology CDS 13355 13804 . - 0 ID=cds-WP_000522415.1;Parent=gene-AB69_RS08975;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AB69_RS08975;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 13888 14046 . - . ID=gene-AB69_RS08970;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AB69_RS08970;old_locus_tag=AB69_2859 NZ_JHDO01000096.1 Protein Homology CDS 13888 14046 . - 0 ID=cds-WP_000508177.1;Parent=gene-AB69_RS08970;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AB69_RS08970;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 14229 14528 . + . ID=gene-AB69_RS08965;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AB69_RS08965;old_locus_tag=AB69_2860 NZ_JHDO01000096.1 Protein Homology CDS 14229 14528 . + 0 ID=cds-WP_000137280.1;Parent=gene-AB69_RS08965;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AB69_RS08965;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 14538 15062 . + . ID=gene-AB69_RS08960;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AB69_RS08960;old_locus_tag=AB69_2861 NZ_JHDO01000096.1 Protein Homology CDS 14538 15062 . + 0 ID=cds-WP_001229442.1;Parent=gene-AB69_RS08960;Dbxref=GenBank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AB69_RS08960;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229442.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 15109 15513 . - . ID=gene-AB69_RS08955;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AB69_RS08955;old_locus_tag=AB69_2862 NZ_JHDO01000096.1 Protein Homology CDS 15109 15513 . - 0 ID=cds-WP_000115383.1;Parent=gene-AB69_RS08955;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AB69_RS08955;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 16182 16631 . + . ID=gene-AB69_RS08950;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AB69_RS08950;old_locus_tag=AB69_2863 NZ_JHDO01000096.1 Protein Homology CDS 16182 16631 . + 0 ID=cds-WP_000492656.1;Parent=gene-AB69_RS08950;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AB69_RS08950;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 16668 17012 . - . ID=gene-AB69_RS08945;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AB69_RS08945;old_locus_tag=AB69_2864 NZ_JHDO01000096.1 Protein Homology CDS 16668 17012 . - 0 ID=cds-WP_000281320.1;Parent=gene-AB69_RS08945;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AB69_RS08945;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 17164 17493 . + . ID=gene-AB69_RS08940;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AB69_RS08940;old_locus_tag=AB69_2865 NZ_JHDO01000096.1 Protein Homology CDS 17164 17493 . + 0 ID=cds-WP_001295174.1;Parent=gene-AB69_RS08940;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AB69_RS08940;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 17741 17986 . + . ID=gene-AB69_RS08935;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AB69_RS08935;old_locus_tag=AB69_2866 NZ_JHDO01000096.1 Protein Homology CDS 17741 17986 . + 0 ID=cds-WP_001223227.1;Parent=gene-AB69_RS08935;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AB69_RS08935;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 17983 18393 . + . ID=gene-AB69_RS08930;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AB69_RS08930;old_locus_tag=AB69_2867 NZ_JHDO01000096.1 Protein Homology CDS 17983 18393 . + 0 ID=cds-WP_000080947.1;Parent=gene-AB69_RS08930;Dbxref=GenBank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AB69_RS08930;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 18366 20510 . + . ID=gene-AB69_RS08925;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AB69_RS08925;old_locus_tag=AB69_2868 NZ_JHDO01000096.1 Protein Homology CDS 18366 20510 . + 0 ID=cds-WP_000246527.1;Parent=gene-AB69_RS08925;Dbxref=GenBank:WP_000246527.1;Name=WP_000246527.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AB69_RS08925;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246527.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 20520 21479 . + . ID=gene-AB69_RS08920;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AB69_RS08920;old_locus_tag=AB69_2869 NZ_JHDO01000096.1 Protein Homology CDS 20520 21479 . + 0 ID=cds-WP_000777969.1;Parent=gene-AB69_RS08920;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AB69_RS08920;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 21833 23035 . + . ID=gene-AB69_RS08915;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AB69_RS08915;old_locus_tag=AB69_2870 NZ_JHDO01000096.1 Protein Homology CDS 21833 23035 . + 0 ID=cds-WP_000985494.1;Parent=gene-AB69_RS08915;Dbxref=GenBank:WP_000985494.1;Name=WP_000985494.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AB69_RS08915;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 23028 24092 . + . ID=gene-AB69_RS08910;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AB69_RS08910;old_locus_tag=AB69_2871 NZ_JHDO01000096.1 Protein Homology CDS 23028 24092 . + 0 ID=cds-WP_000774988.1;Parent=gene-AB69_RS08910;Dbxref=GenBank:WP_000774988.1;Name=WP_000774988.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AB69_RS08910;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 24150 25142 . + . ID=gene-AB69_RS08905;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AB69_RS08905;old_locus_tag=AB69_2872 NZ_JHDO01000096.1 Protein Homology CDS 24150 25142 . + 0 ID=cds-WP_001216525.1;Parent=gene-AB69_RS08905;Dbxref=GenBank:WP_001216525.1;Name=WP_001216525.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AB69_RS08905;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216525.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 25334 26518 . + . ID=gene-AB69_RS08900;Name=AB69_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08900;old_locus_tag=AB69_2874 NZ_JHDO01000096.1 Protein Homology CDS 25334 26518 . + 0 ID=cds-WP_000165680.1;Parent=gene-AB69_RS08900;Dbxref=GenBank:WP_000165680.1;Name=WP_000165680.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AB69_RS08900;product=MFS transporter;protein_id=WP_000165680.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 26642 27379 . + . ID=gene-AB69_RS08895;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AB69_RS08895;old_locus_tag=AB69_2875 NZ_JHDO01000096.1 Protein Homology CDS 26642 27379 . + 0 ID=cds-WP_000445651.1;Parent=gene-AB69_RS08895;Dbxref=GenBank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417167.1;locus_tag=AB69_RS08895;product=L-valine exporter subunit YgaZ;protein_id=WP_000445651.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 27369 27704 . + . ID=gene-AB69_RS08890;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AB69_RS08890;old_locus_tag=AB69_2876 NZ_JHDO01000096.1 Protein Homology CDS 27369 27704 . + 0 ID=cds-WP_000119763.1;Parent=gene-AB69_RS08890;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AB69_RS08890;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 27795 28325 . + . ID=gene-AB69_RS08885;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AB69_RS08885;old_locus_tag=AB69_2877 NZ_JHDO01000096.1 Protein Homology CDS 27795 28325 . + 0 ID=cds-WP_000378442.1;Parent=gene-AB69_RS08885;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AB69_RS08885;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 28452 29624 . + . ID=gene-AB69_RS08880;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AB69_RS08880;old_locus_tag=AB69_2879 NZ_JHDO01000096.1 Protein Homology CDS 28452 29624 . + 0 ID=cds-WP_001326681.1;Parent=gene-AB69_RS08880;Dbxref=GenBank:WP_001326681.1;Name=WP_001326681.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417170.1;locus_tag=AB69_RS08880;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001326681.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 29641 31179 . + . ID=gene-AB69_RS08875;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AB69_RS08875;old_locus_tag=AB69_2880 NZ_JHDO01000096.1 Protein Homology CDS 29641 31179 . + 0 ID=cds-WP_032231403.1;Parent=gene-AB69_RS08875;Dbxref=GenBank:WP_032231403.1;Name=WP_032231403.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AB69_RS08875;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_032231403.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 31243 31758 . - . ID=gene-AB69_RS08870;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AB69_RS08870;old_locus_tag=AB69_2881 NZ_JHDO01000096.1 Protein Homology CDS 31243 31758 . - 0 ID=cds-WP_001130211.1;Parent=gene-AB69_RS08870;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AB69_RS08870;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 31908 33464 . - . ID=gene-AB69_RS08865;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AB69_RS08865;old_locus_tag=AB69_2882 NZ_JHDO01000096.1 Protein Homology CDS 31908 33464 . - 0 ID=cds-WP_000611804.1;Parent=gene-AB69_RS08865;Dbxref=GenBank:WP_000611804.1;Name=WP_000611804.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AB69_RS08865;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 33537 33965 . - . ID=gene-AB69_RS08860;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AB69_RS08860;old_locus_tag=AB69_2883 NZ_JHDO01000096.1 Protein Homology CDS 33537 33965 . - 0 ID=cds-WP_001287454.1;Parent=gene-AB69_RS08860;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AB69_RS08860;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 33962 34528 . - . ID=gene-AB69_RS08855;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AB69_RS08855;old_locus_tag=AB69_2884 NZ_JHDO01000096.1 Protein Homology CDS 33962 34528 . - 0 ID=cds-WP_000273290.1;Parent=gene-AB69_RS08855;Dbxref=GenBank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AB69_RS08855;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 34809 34885 . - . ID=gene-AB69_RS08850;Name=AB69_RS08850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08850;old_locus_tag=AB69_2885 NZ_JHDO01000096.1 tRNAscan-SE tRNA 34809 34885 . - . ID=rna-AB69_RS08850;Parent=gene-AB69_RS08850;anticodon=(pos:complement(34849..34851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08850;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 34809 34885 . - . ID=exon-AB69_RS08850-1;Parent=rna-AB69_RS08850;anticodon=(pos:complement(34849..34851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08850;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 34949 35031 . - . ID=gene-AB69_RS29850;Name=AB69_RS29850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS29850 NZ_JHDO01000096.1 tRNAscan-SE tRNA 34949 35031 . - . ID=rna-AB69_RS29850;Parent=gene-AB69_RS29850;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS29850;product=tRNA-OTHER NZ_JHDO01000096.1 tRNAscan-SE exon 34949 35031 . - . ID=exon-AB69_RS29850-1;Parent=rna-AB69_RS29850;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS29850;product=tRNA-OTHER NZ_JHDO01000096.1 RefSeq gene 35230 35306 . - . ID=gene-AB69_RS08845;Name=AB69_RS08845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08845;old_locus_tag=AB69_2886 NZ_JHDO01000096.1 tRNAscan-SE tRNA 35230 35306 . - . ID=rna-AB69_RS08845;Parent=gene-AB69_RS08845;anticodon=(pos:complement(35270..35272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08845;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 35230 35306 . - . ID=exon-AB69_RS08845-1;Parent=rna-AB69_RS08845;anticodon=(pos:complement(35270..35272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08845;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 35369 35445 . - . ID=gene-AB69_RS08840;Name=AB69_RS08840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08840;old_locus_tag=AB69_2887 NZ_JHDO01000096.1 tRNAscan-SE tRNA 35369 35445 . - . ID=rna-AB69_RS08840;Parent=gene-AB69_RS08840;anticodon=(pos:complement(35409..35411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08840;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 35369 35445 . - . ID=exon-AB69_RS08840-1;Parent=rna-AB69_RS08840;anticodon=(pos:complement(35409..35411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08840;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 35508 35584 . - . ID=gene-AB69_RS08835;Name=AB69_RS08835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08835;old_locus_tag=AB69_2888 NZ_JHDO01000096.1 tRNAscan-SE tRNA 35508 35584 . - . ID=rna-AB69_RS08835;Parent=gene-AB69_RS08835;anticodon=(pos:complement(35548..35550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08835;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 35508 35584 . - . ID=exon-AB69_RS08835-1;Parent=rna-AB69_RS08835;anticodon=(pos:complement(35548..35550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08835;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 35647 35723 . - . ID=gene-AB69_RS08830;Name=AB69_RS08830;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08830;old_locus_tag=AB69_2889 NZ_JHDO01000096.1 tRNAscan-SE tRNA 35647 35723 . - . ID=rna-AB69_RS08830;Parent=gene-AB69_RS08830;anticodon=(pos:complement(35687..35689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08830;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 35647 35723 . - . ID=exon-AB69_RS08830-1;Parent=rna-AB69_RS08830;anticodon=(pos:complement(35687..35689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08830;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 35922 35998 . - . ID=gene-AB69_RS08825;Name=AB69_RS08825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08825;old_locus_tag=AB69_2890 NZ_JHDO01000096.1 tRNAscan-SE tRNA 35922 35998 . - . ID=rna-AB69_RS08825;Parent=gene-AB69_RS08825;anticodon=(pos:complement(35962..35964));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08825;product=tRNA-Arg NZ_JHDO01000096.1 tRNAscan-SE exon 35922 35998 . - . ID=exon-AB69_RS08825-1;Parent=rna-AB69_RS08825;anticodon=(pos:complement(35962..35964));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08825;product=tRNA-Arg NZ_JHDO01000096.1 RefSeq gene 36002 36094 . - . ID=gene-AB69_RS08820;Name=AB69_RS08820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08820;old_locus_tag=AB69_2891 NZ_JHDO01000096.1 tRNAscan-SE tRNA 36002 36094 . - . ID=rna-AB69_RS08820;Parent=gene-AB69_RS08820;anticodon=(pos:complement(36058..36060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08820;product=tRNA-Ser NZ_JHDO01000096.1 tRNAscan-SE exon 36002 36094 . - . ID=exon-AB69_RS08820-1;Parent=rna-AB69_RS08820;anticodon=(pos:complement(36058..36060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08820;product=tRNA-Ser NZ_JHDO01000096.1 RefSeq gene 36410 36595 . - . ID=gene-AB69_RS08815;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AB69_RS08815;old_locus_tag=AB69_2892 NZ_JHDO01000096.1 Protein Homology CDS 36410 36595 . - 0 ID=cds-WP_000906486.1;Parent=gene-AB69_RS08815;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AB69_RS08815;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 36830 39460 . - . ID=gene-AB69_RS08810;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AB69_RS08810;old_locus_tag=AB69_2894 NZ_JHDO01000096.1 Protein Homology CDS 36830 39460 . - 0 ID=cds-WP_000047184.1;Parent=gene-AB69_RS08810;Dbxref=GenBank:WP_000047184.1;Name=WP_000047184.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AB69_RS08810;product=alanine--tRNA ligase;protein_id=WP_000047184.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 39588 40088 . - . ID=gene-AB69_RS08800;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AB69_RS08800;old_locus_tag=AB69_2896 NZ_JHDO01000096.1 Protein Homology CDS 39588 40088 . - 0 ID=cds-WP_000140508.1;Parent=gene-AB69_RS08800;Dbxref=GenBank:WP_000140508.1;Name=WP_000140508.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AB69_RS08800;product=recombination regulator RecX;protein_id=WP_000140508.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 40157 41218 . - . ID=gene-AB69_RS08795;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AB69_RS08795;old_locus_tag=AB69_2897 NZ_JHDO01000096.1 Protein Homology CDS 40157 41218 . - 0 ID=cds-WP_000963143.1;Parent=gene-AB69_RS08795;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AB69_RS08795;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 41298 41795 . - . ID=gene-AB69_RS08790;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AB69_RS08790;old_locus_tag=AB69_2898 NZ_JHDO01000096.1 Protein Homology CDS 41298 41795 . - 0 ID=cds-WP_000132231.1;Parent=gene-AB69_RS08790;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AB69_RS08790;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 41940 43025 . - . ID=gene-AB69_RS08785;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AB69_RS08785;old_locus_tag=AB69_2899 NZ_JHDO01000096.1 Protein Homology CDS 41940 43025 . - 0 ID=cds-WP_001295177.1;Parent=gene-AB69_RS08785;Dbxref=GenBank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AB69_RS08785;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 43281 43844 . + . ID=gene-AB69_RS08780;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AB69_RS08780;old_locus_tag=AB69_2900 NZ_JHDO01000096.1 Protein Homology CDS 43281 43844 . + 0 ID=cds-WP_000573321.1;Parent=gene-AB69_RS08780;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AB69_RS08780;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 43841 44800 . + . ID=gene-AB69_RS08775;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AB69_RS08775;old_locus_tag=AB69_2901 NZ_JHDO01000096.1 Protein Homology CDS 43841 44800 . + 0 ID=cds-WP_000148878.1;Parent=gene-AB69_RS08775;Dbxref=GenBank:WP_000148878.1;Name=WP_000148878.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AB69_RS08775;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148878.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 44811 45182 . + . ID=gene-AB69_RS08770;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AB69_RS08770;old_locus_tag=AB69_2902 NZ_JHDO01000096.1 Protein Homology CDS 44811 45182 . + 0 ID=cds-WP_000216194.1;Parent=gene-AB69_RS08770;Dbxref=GenBank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AB69_RS08770;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 45186 45965 . + . ID=gene-AB69_RS08765;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AB69_RS08765;old_locus_tag=AB69_2903 NZ_JHDO01000096.1 Protein Homology CDS 45186 45965 . + 0 ID=cds-WP_001077358.1;Parent=gene-AB69_RS08765;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AB69_RS08765;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 46070 46429 . + . ID=gene-AB69_RS08760;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AB69_RS08760;old_locus_tag=AB69_2904 NZ_JHDO01000096.1 Protein Homology CDS 46070 46429 . + 0 ID=cds-WP_000252908.1;Parent=gene-AB69_RS08760;Dbxref=GenBank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AB69_RS08760;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 46496 47269 . + . ID=gene-AB69_RS08755;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AB69_RS08755;old_locus_tag=AB69_2905 NZ_JHDO01000096.1 Protein Homology CDS 46496 47269 . + 0 ID=cds-WP_000804550.1;Parent=gene-AB69_RS08755;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AB69_RS08755;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 47262 48227 . + . ID=gene-AB69_RS08750;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AB69_RS08750;old_locus_tag=AB69_2906 NZ_JHDO01000096.1 Protein Homology CDS 47262 48227 . + 0 ID=cds-WP_001287420.1;Parent=gene-AB69_RS08750;Dbxref=GenBank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AB69_RS08750;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 48224 49738 . - . ID=gene-AB69_RS08745;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AB69_RS08745;old_locus_tag=AB69_2907 NZ_JHDO01000096.1 Protein Homology CDS 48224 49738 . - 0 ID=cds-WP_000010749.1;Parent=gene-AB69_RS08745;Dbxref=GenBank:WP_000010749.1;Name=WP_000010749.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AB69_RS08745;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 49925 51364 . + . ID=gene-AB69_RS08740;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AB69_RS08740;old_locus_tag=AB69_2908 NZ_JHDO01000096.1 Protein Homology CDS 49925 51364 . + 0 ID=cds-WP_000029617.1;Parent=gene-AB69_RS08740;Dbxref=GenBank:WP_000029617.1;Name=WP_000029617.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=AB69_RS08740;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029617.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 51361 52494 . + . ID=gene-AB69_RS08735;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AB69_RS08735;old_locus_tag=AB69_2909 NZ_JHDO01000096.1 Protein Homology CDS 51361 52494 . + 0 ID=cds-WP_000064732.1;Parent=gene-AB69_RS08735;Dbxref=GenBank:WP_000064732.1;Name=WP_000064732.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AB69_RS08735;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064732.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 52622 54874 . - . ID=gene-AB69_RS08730;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AB69_RS08730;old_locus_tag=AB69_2910 NZ_JHDO01000096.1 Protein Homology CDS 52622 54874 . - 0 ID=cds-WP_001107704.1;Parent=gene-AB69_RS08730;Dbxref=GenBank:WP_001107704.1;Name=WP_001107704.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AB69_RS08730;product=carbamoyltransferase HypF;protein_id=WP_001107704.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 55027 55554 . - . ID=gene-AB69_RS08725;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AB69_RS08725;old_locus_tag=AB69_2911 NZ_JHDO01000096.1 Protein Homology CDS 55027 55554 . - 0 ID=cds-WP_001078777.1;Parent=gene-AB69_RS08725;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AB69_RS08725;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 55703 56713 . - . ID=gene-AB69_RS08720;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AB69_RS08720;old_locus_tag=AB69_2913 NZ_JHDO01000096.1 Protein Homology CDS 55703 56713 . - 0 ID=cds-WP_001394680.1;Parent=gene-AB69_RS08720;Dbxref=GenBank:WP_001394680.1;Name=WP_001394680.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AB69_RS08720;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001394680.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 56973 58430 . + . ID=gene-AB69_RS08715;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AB69_RS08715;old_locus_tag=AB69_2914 NZ_JHDO01000096.1 Protein Homology CDS 56973 58430 . + 0 ID=cds-WP_032176537.1;Parent=gene-AB69_RS08715;Dbxref=GenBank:WP_032176537.1;Name=WP_032176537.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AB69_RS08715;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_032176537.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 58439 59863 . + . ID=gene-AB69_RS08710;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AB69_RS08710;old_locus_tag=AB69_2915 NZ_JHDO01000096.1 Protein Homology CDS 58439 59863 . + 0 ID=cds-WP_000110363.1;Parent=gene-AB69_RS08710;Dbxref=GenBank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AB69_RS08710;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 60022 60492 . - . ID=gene-AB69_RS08705;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AB69_RS08705;old_locus_tag=AB69_2916 NZ_JHDO01000096.1 Protein Homology CDS 60022 60492 . - 0 ID=cds-WP_000132961.1;Parent=gene-AB69_RS08705;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AB69_RS08705;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 60485 60895 . - . ID=gene-AB69_RS08700;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AB69_RS08700;old_locus_tag=AB69_2917 NZ_JHDO01000096.1 Protein Homology CDS 60485 60895 . - 0 ID=cds-WP_001291921.1;Parent=gene-AB69_RS08700;Dbxref=GenBank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AB69_RS08700;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 60892 61659 . - . ID=gene-AB69_RS08695;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AB69_RS08695;old_locus_tag=AB69_2918 NZ_JHDO01000096.1 Protein Homology CDS 60892 61659 . - 0 ID=cds-WP_000067392.1;Parent=gene-AB69_RS08695;Dbxref=GenBank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=AB69_RS08695;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067392.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 61659 62201 . - . ID=gene-AB69_RS08690;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AB69_RS08690;old_locus_tag=AB69_2919 NZ_JHDO01000096.1 Protein Homology CDS 61659 62201 . - 0 ID=cds-WP_000493781.1;Parent=gene-AB69_RS08690;Dbxref=GenBank:WP_000493781.1;Name=WP_000493781.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417200.1;locus_tag=AB69_RS08690;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493781.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 62211 63920 . - . ID=gene-AB69_RS08685;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AB69_RS08685;old_locus_tag=AB69_2920 NZ_JHDO01000096.1 Protein Homology CDS 62211 63920 . - 0 ID=cds-WP_001288122.1;Parent=gene-AB69_RS08685;Dbxref=GenBank:WP_001288122.1;Name=WP_001288122.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AB69_RS08685;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288122.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 63938 64861 . - . ID=gene-AB69_RS08680;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AB69_RS08680;old_locus_tag=AB69_2921 NZ_JHDO01000096.1 Protein Homology CDS 63938 64861 . - 0 ID=cds-WP_000115224.1;Parent=gene-AB69_RS08680;Dbxref=GenBank:WP_000115224.1;Name=WP_000115224.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AB69_RS08680;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115224.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 64864 66690 . - . ID=gene-AB69_RS08675;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AB69_RS08675;old_locus_tag=AB69_2922 NZ_JHDO01000096.1 Protein Homology CDS 64864 66690 . - 0 ID=cds-WP_001274396.1;Parent=gene-AB69_RS08675;Dbxref=GenBank:WP_001274396.1;Name=WP_001274396.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AB69_RS08675;product=formate hydrogenlyase subunit 3;protein_id=WP_001274396.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 66687 67298 . - . ID=gene-AB69_RS08670;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AB69_RS08670;old_locus_tag=AB69_2923 NZ_JHDO01000096.1 Protein Homology CDS 66687 67298 . - 0 ID=cds-WP_001079186.1;Parent=gene-AB69_RS08670;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AB69_RS08670;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 67423 67884 . - . ID=gene-AB69_RS08665;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AB69_RS08665;old_locus_tag=AB69_2924 NZ_JHDO01000096.1 Protein Homology CDS 67423 67884 . - 0 ID=cds-WP_000158056.1;Parent=gene-AB69_RS08665;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AB69_RS08665;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 68096 68446 . + . ID=gene-AB69_RS08660;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB69_RS08660;old_locus_tag=AB69_2925 NZ_JHDO01000096.1 Protein Homology CDS 68096 68446 . + 0 ID=cds-WP_001299100.1;Parent=gene-AB69_RS08660;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AB69_RS08660;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 68450 69322 . + . ID=gene-AB69_RS08655;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AB69_RS08655;old_locus_tag=AB69_2926 NZ_JHDO01000096.1 Protein Homology CDS 68450 69322 . + 0 ID=cds-WP_000337665.1;Parent=gene-AB69_RS08655;Dbxref=GenBank:WP_000337665.1;Name=WP_000337665.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AB69_RS08655;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 69313 69585 . + . ID=gene-AB69_RS08650;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AB69_RS08650;old_locus_tag=AB69_2927 NZ_JHDO01000096.1 Protein Homology CDS 69313 69585 . + 0 ID=cds-WP_000334881.1;Parent=gene-AB69_RS08650;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AB69_RS08650;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 69585 70706 . + . ID=gene-AB69_RS08645;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AB69_RS08645;old_locus_tag=AB69_2928 NZ_JHDO01000096.1 Protein Homology CDS 69585 70706 . + 0 ID=cds-WP_001212985.1;Parent=gene-AB69_RS08645;Dbxref=GenBank:WP_001212985.1;Name=WP_001212985.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417209.1;locus_tag=AB69_RS08645;product=hydrogenase formation protein HypD;protein_id=WP_001212985.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 70703 71713 . + . ID=gene-AB69_RS08640;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AB69_RS08640;old_locus_tag=AB69_2929 NZ_JHDO01000096.1 Protein Homology CDS 70703 71713 . + 0 ID=cds-WP_001059922.1;Parent=gene-AB69_RS08640;Dbxref=GenBank:WP_001059922.1;Name=WP_001059922.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AB69_RS08640;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059922.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 71787 73865 . + . ID=gene-AB69_RS08635;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB69_RS08635;old_locus_tag=AB69_2930 NZ_JHDO01000096.1 Protein Homology CDS 71787 73865 . + 0 ID=cds-WP_001301332.1;Parent=gene-AB69_RS08635;Dbxref=GenBank:WP_001301332.1;Name=WP_001301332.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417211.1;locus_tag=AB69_RS08635;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_001301332.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 73902 74255 . - . ID=gene-AB69_RS08630;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AB69_RS08630;old_locus_tag=AB69_2931 NZ_JHDO01000096.1 Protein Homology CDS 73902 74255 . - 0 ID=cds-WP_032231406.1;Parent=gene-AB69_RS08630;Dbxref=GenBank:WP_032231406.1;Name=WP_032231406.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AB69_RS08630;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_032231406.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 74332 74466 . - . ID=gene-AB69_RS29855;Name=AB69_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29855;old_locus_tag=AB69_2932 NZ_JHDO01000096.1 Protein Homology CDS 74332 74466 . - 0 ID=cds-WP_000611932.1;Parent=gene-AB69_RS29855;Dbxref=GenBank:WP_000611932.1;Name=WP_000611932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AB69_RS29855;product=hypothetical protein;protein_id=WP_000611932.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 74542 77103 . + . ID=gene-AB69_RS08625;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AB69_RS08625;old_locus_tag=AB69_2933 NZ_JHDO01000096.1 Protein Homology CDS 74542 77103 . + 0 ID=cds-WP_001272928.1;Parent=gene-AB69_RS08625;Dbxref=GenBank:WP_001272928.1;Name=WP_001272928.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417213.1;locus_tag=AB69_RS08625;product=DNA mismatch repair protein MutS;protein_id=WP_001272928.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 77209 77865 . + . ID=gene-AB69_RS08620;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AB69_RS08620;old_locus_tag=AB69_2934 NZ_JHDO01000096.1 Protein Homology CDS 77209 77865 . + 0 ID=cds-WP_001141322.1;Parent=gene-AB69_RS08620;Dbxref=GenBank:WP_001141322.1;Name=WP_001141322.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417214.1;locus_tag=AB69_RS08620;product=protein-serine/threonine phosphatase;protein_id=WP_001141322.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 77916 78683 . - . ID=gene-AB69_RS08615;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AB69_RS08615;old_locus_tag=AB69_2935 NZ_JHDO01000096.1 Protein Homology CDS 77916 78683 . - 0 ID=cds-WP_001300386.1;Parent=gene-AB69_RS08615;Dbxref=GenBank:WP_001300386.1;Name=WP_001300386.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AB69_RS08615;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001300386.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 78879 79787 . + . ID=gene-AB69_RS08610;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AB69_RS08610;old_locus_tag=AB69_2936 NZ_JHDO01000096.1 Protein Homology CDS 78879 79787 . + 0 ID=cds-WP_000847979.1;Parent=gene-AB69_RS08610;Dbxref=GenBank:WP_000847979.1;Name=WP_000847979.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AB69_RS08610;product=L-threonate dehydrogenase;protein_id=WP_000847979.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 79784 81046 . + . ID=gene-AB69_RS08605;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AB69_RS08605;old_locus_tag=AB69_2937 NZ_JHDO01000096.1 Protein Homology CDS 79784 81046 . + 0 ID=cds-WP_032231408.1;Parent=gene-AB69_RS08605;Dbxref=GenBank:WP_032231408.1;Name=WP_032231408.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AB69_RS08605;product=3-oxo-tetronate kinase;protein_id=WP_032231408.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 81043 81681 . + . ID=gene-AB69_RS08600;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AB69_RS08600;old_locus_tag=AB69_2938 NZ_JHDO01000096.1 Protein Homology CDS 81043 81681 . + 0 ID=cds-WP_001278994.1;Parent=gene-AB69_RS08600;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AB69_RS08600;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 81686 82462 . + . ID=gene-AB69_RS08595;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AB69_RS08595;old_locus_tag=AB69_2939 NZ_JHDO01000096.1 Protein Homology CDS 81686 82462 . + 0 ID=cds-WP_001136925.1;Parent=gene-AB69_RS08595;Dbxref=GenBank:WP_001136925.1;Name=WP_001136925.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AB69_RS08595;product=HPr family phosphocarrier protein;protein_id=WP_001136925.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 82551 83915 . + . ID=gene-AB69_RS08590;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AB69_RS08590;old_locus_tag=AB69_2940 NZ_JHDO01000096.1 Protein Homology CDS 82551 83915 . + 0 ID=cds-WP_000104459.1;Parent=gene-AB69_RS08590;Dbxref=GenBank:WP_000104459.1;Name=WP_000104459.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AB69_RS08590;product=GntP family transporter;protein_id=WP_000104459.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 84009 85001 . - . ID=gene-AB69_RS08585;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AB69_RS08585;old_locus_tag=AB69_2941 NZ_JHDO01000096.1 Protein Homology CDS 84009 85001 . - 0 ID=cds-WP_032231409.1;Parent=gene-AB69_RS08585;Dbxref=GenBank:WP_032231409.1;Name=WP_032231409.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AB69_RS08585;product=RNA polymerase sigma factor RpoS;protein_id=WP_032231409.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 85064 86158 . - . ID=gene-AB69_RS08580;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AB69_RS08580;old_locus_tag=AB69_2942 NZ_JHDO01000096.1 Protein Homology CDS 85064 86158 . - 0 ID=cds-WP_224692580.1;Parent=gene-AB69_RS08580;Dbxref=GenBank:WP_224692580.1;Name=WP_224692580.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AB69_RS08580;product=murein hydrolase activator NlpD;protein_id=WP_224692580.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 86343 86969 . - . ID=gene-AB69_RS08575;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AB69_RS08575;old_locus_tag=AB69_2944 NZ_JHDO01000096.1 Protein Homology CDS 86343 86969 . - 0 ID=cds-WP_000254708.1;Parent=gene-AB69_RS08575;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AB69_RS08575;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 86963 87724 . - . ID=gene-AB69_RS08570;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AB69_RS08570;old_locus_tag=AB69_2945 NZ_JHDO01000096.1 Protein Homology CDS 86963 87724 . - 0 ID=cds-WP_001295182.1;Parent=gene-AB69_RS08570;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AB69_RS08570;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 87705 88754 . - . ID=gene-AB69_RS08565;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AB69_RS08565;old_locus_tag=AB69_2946 NZ_JHDO01000096.1 Protein Homology CDS 87705 88754 . - 0 ID=cds-WP_000568946.1;Parent=gene-AB69_RS08565;Dbxref=GenBank:WP_000568946.1;Name=WP_000568946.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AB69_RS08565;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568946.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 88751 89230 . - . ID=gene-AB69_RS08560;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AB69_RS08560;old_locus_tag=AB69_2947 NZ_JHDO01000096.1 Protein Homology CDS 88751 89230 . - 0 ID=cds-WP_001219242.1;Parent=gene-AB69_RS08560;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AB69_RS08560;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 89230 89940 . - . ID=gene-AB69_RS08555;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AB69_RS08555;old_locus_tag=AB69_2948 NZ_JHDO01000096.1 Protein Homology CDS 89230 89940 . - 0 ID=cds-WP_000246138.1;Parent=gene-AB69_RS08555;Dbxref=GenBank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AB69_RS08555;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 89959 90270 . - . ID=gene-AB69_RS08550;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AB69_RS08550;old_locus_tag=AB69_2949 NZ_JHDO01000096.1 Protein Homology CDS 89959 90270 . - 0 ID=cds-WP_000517476.1;Parent=gene-AB69_RS08550;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AB69_RS08550;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 90464 90787 . - . ID=gene-AB69_RS08545;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AB69_RS08545;old_locus_tag=AB69_2950 NZ_JHDO01000096.1 Protein Homology CDS 90464 90787 . - 0 ID=cds-WP_001246104.1;Parent=gene-AB69_RS08545;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AB69_RS08545;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 90837 91442 . - . ID=gene-AB69_RS08540;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AB69_RS08540;old_locus_tag=AB69_2951 NZ_JHDO01000096.1 Protein Homology CDS 90837 91442 . - 0 ID=cds-WP_001173676.1;Parent=gene-AB69_RS08540;Dbxref=GenBank:WP_001173676.1;Name=WP_001173676.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AB69_RS08540;product=adenylyl-sulfate kinase;protein_id=WP_001173676.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 91442 92869 . - . ID=gene-AB69_RS08535;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AB69_RS08535;old_locus_tag=AB69_2952 NZ_JHDO01000096.1 Protein Homology CDS 91442 92869 . - 0 ID=cds-WP_001090386.1;Parent=gene-AB69_RS08535;Dbxref=GenBank:WP_001090386.1;Name=WP_001090386.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AB69_RS08535;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090386.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 92871 93779 . - . ID=gene-AB69_RS08530;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AB69_RS08530;old_locus_tag=AB69_2953 NZ_JHDO01000096.1 Protein Homology CDS 92871 93779 . - 0 ID=cds-WP_000372108.1;Parent=gene-AB69_RS08530;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AB69_RS08530;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JHDO01000096.1 RefSeq gene 94031 95068 . + . ID=gene-AB69_RS08525;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AB69_RS08525;old_locus_tag=AB69_2954 NZ_JHDO01000096.1 Protein Homology CDS 94031 95068 . + 0 ID=cds-WP_000490402.1;Parent=gene-AB69_RS08525;Dbxref=GenBank:WP_000490402.1;Name=WP_000490402.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AB69_RS08525;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490402.1;transl_table=11 NZ_JHDO01000096.1 RefSeq direct_repeat 95151 95484 . + . ID=id-NZ_JHDO01000096.1:95151..95484;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=95151..95179;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JHDO01000096.1 RefSeq gene 95562 96674 . + . ID=gene-AB69_RS08520;Name=AB69_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08520;old_locus_tag=AB69_2956 NZ_JHDO01000096.1 Protein Homology CDS 95562 96674 . + 0 ID=cds-WP_001300563.1-5;Parent=gene-AB69_RS08520;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS08520;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDO01000097.1 1 20673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000097.1 RefSeq region 1 20673 . + . ID=NZ_JHDO01000097.1:1..20673;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000097.1 RefSeq gene 1 267 . + . ID=gene-AB69_RS08515;Name=AB69_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08515;old_locus_tag=AB69_2957;partial=true;start_range=.,1 NZ_JHDO01000097.1 Protein Homology CDS 1 267 . + 0 ID=cds-WP_000442089.1-2;Parent=gene-AB69_RS08515;Dbxref=GenBank:WP_000442089.1;Name=WP_000442089.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS08515;partial=true;product=transposase;protein_id=WP_000442089.1;start_range=.,1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 460 612 . - . ID=gene-AB69_RS0124875;Name=AB69_RS0124875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124875 NZ_JHDO01000097.1 Protein Homology CDS 460 612 . - 0 ID=cds-WP_000956460.1;Parent=gene-AB69_RS0124875;Dbxref=GenBank:WP_000956460.1;Name=WP_000956460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AB69_RS0124875;product=Hok/Gef family protein;protein_id=WP_000956460.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 877 1611 . - . ID=gene-AB69_RS08510;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AB69_RS08510;old_locus_tag=AB69_2958 NZ_JHDO01000097.1 Protein Homology CDS 877 1611 . - 0 ID=cds-WP_000039863.1;Parent=gene-AB69_RS08510;Dbxref=GenBank:WP_000039863.1;Name=WP_000039863.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AB69_RS08510;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039863.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 1685 3397 . - . ID=gene-AB69_RS08505;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AB69_RS08505;old_locus_tag=AB69_2959 NZ_JHDO01000097.1 Protein Homology CDS 1685 3397 . - 0 ID=cds-WP_001290699.1;Parent=gene-AB69_RS08505;Dbxref=GenBank:WP_001290699.1;Name=WP_001290699.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AB69_RS08505;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290699.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 3397 5196 . - . ID=gene-AB69_RS08500;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AB69_RS08500;old_locus_tag=AB69_2960 NZ_JHDO01000097.1 Protein Homology CDS 3397 5196 . - 0 ID=cds-WP_000211907.1;Parent=gene-AB69_RS08500;Dbxref=GenBank:WP_000211907.1;Name=WP_000211907.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AB69_RS08500;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211907.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 5515 5877 . + . ID=gene-AB69_RS08495;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AB69_RS08495;old_locus_tag=AB69_2962 NZ_JHDO01000097.1 Protein Homology CDS 5515 5877 . + 0 ID=cds-WP_000108294.1;Parent=gene-AB69_RS08495;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AB69_RS08495;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 5955 7226 . + . ID=gene-AB69_RS08490;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AB69_RS08490;old_locus_tag=AB69_2963 NZ_JHDO01000097.1 Protein Homology CDS 5955 7226 . + 0 ID=cds-WP_001301334.1;Parent=gene-AB69_RS08490;Dbxref=GenBank:WP_001301334.1;Name=WP_001301334.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AB69_RS08490;product=FAD-dependent oxidoreductase;protein_id=WP_001301334.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 7217 7477 . + . ID=gene-AB69_RS08485;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AB69_RS08485;old_locus_tag=AB69_2964 NZ_JHDO01000097.1 Protein Homology CDS 7217 7477 . + 0 ID=cds-WP_000109529.1;Parent=gene-AB69_RS08485;Dbxref=GenBank:WP_000109529.1;Name=WP_000109529.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AB69_RS08485;product=ferredoxin family protein;protein_id=WP_000109529.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 7494 8069 . + . ID=gene-AB69_RS08480;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AB69_RS08480;old_locus_tag=AB69_2965 NZ_JHDO01000097.1 Protein Homology CDS 7494 8069 . + 0 ID=cds-WP_001130266.1;Parent=gene-AB69_RS08480;Dbxref=GenBank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AB69_RS08480;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 8217 9077 . - . ID=gene-AB69_RS08475;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AB69_RS08475;old_locus_tag=AB69_2966 NZ_JHDO01000097.1 Protein Homology CDS 8217 9077 . - 0 ID=cds-WP_001299097.1;Parent=gene-AB69_RS08475;Dbxref=GenBank:WP_001299097.1;Name=WP_001299097.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AB69_RS08475;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001299097.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 9074 9853 . - . ID=gene-AB69_RS08470;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AB69_RS08470;old_locus_tag=AB69_2967 NZ_JHDO01000097.1 Protein Homology CDS 9074 9853 . - 0 ID=cds-WP_001735631.1;Parent=gene-AB69_RS08470;Dbxref=GenBank:WP_001735631.1;Name=WP_001735631.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AB69_RS08470;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001735631.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 9831 11240 . - . ID=gene-AB69_RS08465;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AB69_RS08465;old_locus_tag=AB69_2968 NZ_JHDO01000097.1 Protein Homology CDS 9831 11240 . - 0 ID=cds-WP_074528899.1;Parent=gene-AB69_RS08465;Dbxref=GenBank:WP_074528899.1;Name=WP_074528899.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AB69_RS08465;product=MFS transporter;protein_id=WP_074528899.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 11262 12716 . - . ID=gene-AB69_RS08460;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AB69_RS08460;old_locus_tag=AB69_2969 NZ_JHDO01000097.1 Protein Homology CDS 11262 12716 . - 0 ID=cds-WP_000059307.1;Parent=gene-AB69_RS08460;Dbxref=GenBank:WP_000059307.1;Name=WP_000059307.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026183.1;locus_tag=AB69_RS08460;product=FAD-binding oxidoreductase;protein_id=WP_000059307.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 12786 13571 . - . ID=gene-AB69_RS08455;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AB69_RS08455;old_locus_tag=AB69_2970 NZ_JHDO01000097.1 Protein Homology CDS 12786 13571 . - 0 ID=cds-WP_000021321.1;Parent=gene-AB69_RS08455;Dbxref=GenBank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AB69_RS08455;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 13890 15167 . + . ID=gene-AB69_RS08450;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AB69_RS08450;old_locus_tag=AB69_2971 NZ_JHDO01000097.1 Protein Homology CDS 13890 15167 . + 0 ID=cds-WP_001164544.1;Parent=gene-AB69_RS08450;Dbxref=GenBank:WP_001164544.1;Name=WP_001164544.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417255.1;locus_tag=AB69_RS08450;product=MFS transporter;protein_id=WP_001164544.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 15194 16672 . + . ID=gene-AB69_RS08445;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AB69_RS08445;old_locus_tag=AB69_2972 NZ_JHDO01000097.1 Protein Homology CDS 15194 16672 . + 0 ID=cds-WP_000039688.1;Parent=gene-AB69_RS08445;Dbxref=GenBank:WP_000039688.1;Name=WP_000039688.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AB69_RS08445;product=FGGY-family carbohydrate kinase;protein_id=WP_000039688.1;transl_table=11 NZ_JHDO01000097.1 RefSeq direct_repeat 17312 17705 . + . ID=id-NZ_JHDO01000097.1:17312..17705;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=17312..17339;rpt_unit_seq=ggtttatccccgctggcgcggggaacac NZ_JHDO01000097.1 RefSeq gene 18045 18716 . - . ID=gene-AB69_RS08440;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AB69_RS08440;old_locus_tag=AB69_2975 NZ_JHDO01000097.1 Protein Homology CDS 18045 18716 . - 0 ID=cds-WP_001199973.1;Parent=gene-AB69_RS08440;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AB69_RS08440;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 18855 18995 . + . ID=gene-AB69_RS08435;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AB69_RS08435;old_locus_tag=AB69_2976 NZ_JHDO01000097.1 Protein Homology CDS 18855 18995 . + 0 ID=cds-WP_001288228.1;Parent=gene-AB69_RS08435;Dbxref=GenBank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AB69_RS08435;product=cell envelope stress response protein YqcG;protein_id=WP_001288228.1;transl_table=11 NZ_JHDO01000097.1 RefSeq gene 19009 19881 . + . ID=gene-AB69_RS08430;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AB69_RS08430;old_locus_tag=AB69_2977 NZ_JHDO01000097.1 Protein Homology CDS 19009 19881 . + 0 ID=cds-WP_001268460.1;Parent=gene-AB69_RS08430;Dbxref=GenBank:WP_001268460.1;Name=WP_001268460.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AB69_RS08430;product=TPM domain-containing protein;protein_id=WP_001268460.1;transl_table=11 NZ_JHDO01000097.1 RefSeq pseudogene 19980 20673 . + . ID=gene-AB69_RS08425;Name=AB69_RS08425;end_range=20673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS08425;old_locus_tag=AB69_2978;partial=true;pseudo=true NZ_JHDO01000097.1 Protein Homology CDS 19980 20673 . + 0 ID=cds-AB69_RS08425;Parent=gene-AB69_RS08425;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=20673,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708590.1;locus_tag=AB69_RS08425;partial=true;product=IS4-like element IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000098.1 1 122340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000098.1 RefSeq region 1 122340 . + . ID=NZ_JHDO01000098.1:1..122340;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000098.1 RefSeq gene 1 1142 . + . ID=gene-AB69_RS08420;Name=AB69_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08420;old_locus_tag=AB69_2979;partial=true;start_range=.,1 NZ_JHDO01000098.1 Protein Homology CDS 1 1142 . + 2 ID=cds-WP_032235697.1;Parent=gene-AB69_RS08420;Dbxref=GenBank:WP_032235697.1;Name=WP_032235697.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418698.1;locus_tag=AB69_RS08420;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032235697.1;start_range=.,1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 1197 2495 . - . ID=gene-AB69_RS08415;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AB69_RS08415;old_locus_tag=AB69_2980 NZ_JHDO01000098.1 Protein Homology CDS 1197 2495 . - 0 ID=cds-WP_000036723.1;Parent=gene-AB69_RS08415;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AB69_RS08415;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 2583 4220 . - . ID=gene-AB69_RS08410;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AB69_RS08410;old_locus_tag=AB69_2981 NZ_JHDO01000098.1 Protein Homology CDS 2583 4220 . - 0 ID=cds-WP_000210878.1;Parent=gene-AB69_RS08410;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AB69_RS08410;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 4448 5239 . - . ID=gene-AB69_RS08405;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AB69_RS08405;old_locus_tag=AB69_2982 NZ_JHDO01000098.1 Protein Homology CDS 4448 5239 . - 0 ID=cds-WP_001071648.1;Parent=gene-AB69_RS08405;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AB69_RS08405;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 5310 5645 . - . ID=gene-AB69_RS08400;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AB69_RS08400;old_locus_tag=AB69_2983 NZ_JHDO01000098.1 Protein Homology CDS 5310 5645 . - 0 ID=cds-WP_000254738.1;Parent=gene-AB69_RS08400;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AB69_RS08400;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 5645 5893 . - . ID=gene-AB69_RS08395;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AB69_RS08395;old_locus_tag=AB69_2984 NZ_JHDO01000098.1 Protein Homology CDS 5645 5893 . - 0 ID=cds-WP_000581937.1;Parent=gene-AB69_RS08395;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AB69_RS08395;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 5971 8205 . - . ID=gene-AB69_RS08390;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AB69_RS08390;old_locus_tag=AB69_2985 NZ_JHDO01000098.1 Protein Homology CDS 5971 8205 . - 0 ID=cds-WP_000226815.1;Parent=gene-AB69_RS08390;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AB69_RS08390;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 8253 9554 . - . ID=gene-AB69_RS08385;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AB69_RS08385;old_locus_tag=AB69_2986 NZ_JHDO01000098.1 Protein Homology CDS 8253 9554 . - 0 ID=cds-WP_000046812.1;Parent=gene-AB69_RS08385;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AB69_RS08385;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 9611 12367 . + . ID=gene-AB69_RS08380;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AB69_RS08380;old_locus_tag=AB69_2987 NZ_JHDO01000098.1 Protein Homology CDS 9611 12367 . + 0 ID=cds-WP_000186450.1;Parent=gene-AB69_RS08380;Dbxref=GenBank:WP_000186450.1;Name=WP_000186450.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AB69_RS08380;product=two-component sensor histidine kinase BarA;protein_id=WP_000186450.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 12599 13939 . - . ID=gene-AB69_RS08375;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AB69_RS08375;old_locus_tag=AB69_2988 NZ_JHDO01000098.1 Protein Homology CDS 12599 13939 . - 0 ID=cds-WP_000098255.1;Parent=gene-AB69_RS08375;Dbxref=GenBank:WP_000098255.1;Name=WP_000098255.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AB69_RS08375;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 13960 15300 . - . ID=gene-AB69_RS08370;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AB69_RS08370;old_locus_tag=AB69_2989 NZ_JHDO01000098.1 Protein Homology CDS 13960 15300 . - 0 ID=cds-WP_000235391.1;Parent=gene-AB69_RS08370;Dbxref=GenBank:WP_000235391.1;Name=WP_000235391.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AB69_RS08370;product=enolase C-terminal domain-like protein;protein_id=WP_000235391.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 15302 16654 . - . ID=gene-AB69_RS08365;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AB69_RS08365;old_locus_tag=AB69_2990 NZ_JHDO01000098.1 Protein Homology CDS 15302 16654 . - 0 ID=cds-WP_000097072.1;Parent=gene-AB69_RS08365;Dbxref=GenBank:WP_000097072.1;Name=WP_000097072.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AB69_RS08365;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097072.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 17089 17538 . - . ID=gene-AB69_RS08360;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AB69_RS08360;old_locus_tag=AB69_2993 NZ_JHDO01000098.1 Protein Homology CDS 17089 17538 . - 0 ID=cds-WP_000807753.1;Parent=gene-AB69_RS08360;Dbxref=GenBank:WP_000807753.1;Name=WP_000807753.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AB69_RS08360;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 17556 18338 . - . ID=gene-AB69_RS08355;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AB69_RS08355;old_locus_tag=AB69_2994 NZ_JHDO01000098.1 Protein Homology CDS 17556 18338 . - 0 ID=cds-WP_000890001.1;Parent=gene-AB69_RS08355;Dbxref=GenBank:WP_000890001.1;Name=WP_000890001.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AB69_RS08355;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 18338 18667 . - . ID=gene-AB69_RS08350;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AB69_RS08350;old_locus_tag=AB69_2995 NZ_JHDO01000098.1 Protein Homology CDS 18338 18667 . - 0 ID=cds-WP_000206990.1;Parent=gene-AB69_RS08350;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AB69_RS08350;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 19289 19834 . - . ID=gene-AB69_RS08345;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AB69_RS08345;old_locus_tag=AB69_2996 NZ_JHDO01000098.1 Protein Homology CDS 19289 19834 . - 0 ID=cds-WP_000342431.1;Parent=gene-AB69_RS08345;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AB69_RS08345;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 19902 20750 . + . ID=gene-AB69_RS08340;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AB69_RS08340;old_locus_tag=AB69_2997 NZ_JHDO01000098.1 Protein Homology CDS 19902 20750 . + 0 ID=cds-WP_000100421.1;Parent=gene-AB69_RS08340;Dbxref=GenBank:WP_000100421.1;Name=WP_000100421.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417274.1;locus_tag=AB69_RS08340;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100421.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 20862 22226 . + . ID=gene-AB69_RS08335;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AB69_RS08335;old_locus_tag=AB69_2998 NZ_JHDO01000098.1 Protein Homology CDS 20862 22226 . + 0 ID=cds-WP_000627995.1;Parent=gene-AB69_RS08335;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AB69_RS08335;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 22783 24072 . + . ID=gene-AB69_RS08330;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AB69_RS08330;old_locus_tag=AB69_2999 NZ_JHDO01000098.1 Protein Homology CDS 22783 24072 . + 0 ID=cds-WP_000450476.1;Parent=gene-AB69_RS08330;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AB69_RS08330;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 24130 25497 . + . ID=gene-AB69_RS08325;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AB69_RS08325;old_locus_tag=AB69_3000 NZ_JHDO01000098.1 Protein Homology CDS 24130 25497 . + 0 ID=cds-WP_000626422.1;Parent=gene-AB69_RS08325;Dbxref=GenBank:WP_000626422.1;Name=WP_000626422.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417277.1;locus_tag=AB69_RS08325;product=L-serine ammonia-lyase II;protein_id=WP_000626422.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 25609 26364 . + . ID=gene-AB69_RS08320;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AB69_RS08320;old_locus_tag=AB69_3001 NZ_JHDO01000098.1 Protein Homology CDS 25609 26364 . + 0 ID=cds-WP_000268232.1;Parent=gene-AB69_RS08320;Dbxref=GenBank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AB69_RS08320;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 26419 27567 . - . ID=gene-AB69_RS08315;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AB69_RS08315;old_locus_tag=AB69_3002 NZ_JHDO01000098.1 Protein Homology CDS 26419 27567 . - 0 ID=cds-WP_000013588.1;Parent=gene-AB69_RS08315;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AB69_RS08315;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 27595 28242 . - . ID=gene-AB69_RS08310;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AB69_RS08310;old_locus_tag=AB69_3003 NZ_JHDO01000098.1 Protein Homology CDS 27595 28242 . - 0 ID=cds-WP_000440781.1;Parent=gene-AB69_RS08310;Dbxref=GenBank:WP_000440781.1;Name=WP_000440781.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=AB69_RS08310;product=L-fuculose-phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 28789 30105 . + . ID=gene-AB69_RS08305;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AB69_RS08305;old_locus_tag=AB69_3004 NZ_JHDO01000098.1 Protein Homology CDS 28789 30105 . + 0 ID=cds-WP_000528603.1;Parent=gene-AB69_RS08305;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AB69_RS08305;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 30138 31913 . + . ID=gene-AB69_RS08300;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AB69_RS08300;old_locus_tag=AB69_3005 NZ_JHDO01000098.1 Protein Homology CDS 30138 31913 . + 0 ID=cds-WP_000724153.1;Parent=gene-AB69_RS08300;Dbxref=GenBank:WP_000724153.1;Name=WP_000724153.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AB69_RS08300;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 32022 33440 . + . ID=gene-AB69_RS08295;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AB69_RS08295;old_locus_tag=AB69_3006 NZ_JHDO01000098.1 Protein Homology CDS 32022 33440 . + 0 ID=cds-WP_032231416.1;Parent=gene-AB69_RS08295;Dbxref=GenBank:WP_032231416.1;Name=WP_032231416.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AB69_RS08295;product=L-fuculokinase;protein_id=WP_032231416.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 33442 33864 . + . ID=gene-AB69_RS08290;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AB69_RS08290;old_locus_tag=AB69_3007 NZ_JHDO01000098.1 Protein Homology CDS 33442 33864 . + 0 ID=cds-WP_000920840.1;Parent=gene-AB69_RS08290;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AB69_RS08290;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 33922 34653 . + . ID=gene-AB69_RS08285;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AB69_RS08285;old_locus_tag=AB69_3008 NZ_JHDO01000098.1 Protein Homology CDS 33922 34653 . + 0 ID=cds-WP_000642344.1;Parent=gene-AB69_RS08285;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AB69_RS08285;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 34697 35797 . - . ID=gene-AB69_RS08280;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AB69_RS08280;old_locus_tag=AB69_3009 NZ_JHDO01000098.1 Protein Homology CDS 34697 35797 . - 0 ID=cds-WP_001045520.1;Parent=gene-AB69_RS08280;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AB69_RS08280;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 35790 36185 . - . ID=gene-AB69_RS08275;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AB69_RS08275;old_locus_tag=AB69_3010 NZ_JHDO01000098.1 Protein Homology CDS 35790 36185 . - 0 ID=cds-WP_000203905.1;Parent=gene-AB69_RS08275;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AB69_RS08275;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 36204 37121 . - . ID=gene-AB69_RS08270;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AB69_RS08270;old_locus_tag=AB69_3011 NZ_JHDO01000098.1 Protein Homology CDS 36204 37121 . - 0 ID=cds-WP_032231418.1;Parent=gene-AB69_RS08270;Dbxref=GenBank:WP_032231418.1;Name=WP_032231418.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AB69_RS08270;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_032231418.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 37472 37699 . - . ID=gene-AB69_RS08265;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AB69_RS08265;old_locus_tag=AB69_3012 NZ_JHDO01000098.1 Protein Homology CDS 37472 37699 . - 0 ID=cds-WP_000750398.1;Parent=gene-AB69_RS08265;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AB69_RS08265;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 37891 39096 . + . ID=gene-AB69_RS08260;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AB69_RS08260;old_locus_tag=AB69_3013 NZ_JHDO01000098.1 Protein Homology CDS 37891 39096 . + 0 ID=cds-WP_001300698.1;Parent=gene-AB69_RS08260;Dbxref=GenBank:WP_001300698.1;Name=WP_001300698.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AB69_RS08260;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 39096 39539 . + . ID=gene-AB69_RS08255;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AB69_RS08255;old_locus_tag=AB69_3014 NZ_JHDO01000098.1 Protein Homology CDS 39096 39539 . + 0 ID=cds-WP_000184261.1;Parent=gene-AB69_RS08255;Dbxref=GenBank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AB69_RS08255;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 39590 40396 . - . ID=gene-AB69_RS08250;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AB69_RS08250;old_locus_tag=AB69_3015 NZ_JHDO01000098.1 Protein Homology CDS 39590 40396 . - 0 ID=cds-WP_000117728.1;Parent=gene-AB69_RS08250;Dbxref=GenBank:WP_000117728.1;Name=WP_000117728.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AB69_RS08250;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 40635 41732 . - . ID=gene-AB69_RS08245;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AB69_RS08245;old_locus_tag=AB69_3016 NZ_JHDO01000098.1 Protein Homology CDS 40635 41732 . - 0 ID=cds-WP_032231420.1;Parent=gene-AB69_RS08245;Dbxref=GenBank:WP_032231420.1;Name=WP_032231420.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AB69_RS08245;product=murein transglycosylase A;protein_id=WP_032231420.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 41941 42017 . + . ID=gene-AB69_RS08240;Name=AB69_RS08240;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08240;old_locus_tag=AB69_3017 NZ_JHDO01000098.1 tRNAscan-SE tRNA 41941 42017 . + . ID=rna-AB69_RS08240;Parent=gene-AB69_RS08240;anticodon=(pos:41975..41977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08240;product=tRNA-Met NZ_JHDO01000098.1 tRNAscan-SE exon 41941 42017 . + . ID=exon-AB69_RS08240-1;Parent=rna-AB69_RS08240;anticodon=(pos:41975..41977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08240;product=tRNA-Met NZ_JHDO01000098.1 RefSeq gene 42051 42127 . + . ID=gene-AB69_RS08235;Name=AB69_RS08235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08235;old_locus_tag=AB69_3018 NZ_JHDO01000098.1 tRNAscan-SE tRNA 42051 42127 . + . ID=rna-AB69_RS08235;Parent=gene-AB69_RS08235;anticodon=(pos:42085..42087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08235;product=tRNA-Met NZ_JHDO01000098.1 tRNAscan-SE exon 42051 42127 . + . ID=exon-AB69_RS08235-1;Parent=rna-AB69_RS08235;anticodon=(pos:42085..42087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08235;product=tRNA-Met NZ_JHDO01000098.1 RefSeq gene 42161 42237 . + . ID=gene-AB69_RS08230;Name=AB69_RS08230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS08230;old_locus_tag=AB69_3019 NZ_JHDO01000098.1 tRNAscan-SE tRNA 42161 42237 . + . ID=rna-AB69_RS08230;Parent=gene-AB69_RS08230;anticodon=(pos:42195..42197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08230;product=tRNA-Met NZ_JHDO01000098.1 tRNAscan-SE exon 42161 42237 . + . ID=exon-AB69_RS08230-1;Parent=rna-AB69_RS08230;anticodon=(pos:42195..42197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS08230;product=tRNA-Met NZ_JHDO01000098.1 RefSeq gene 42311 43564 . - . ID=gene-AB69_RS08225;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AB69_RS08225;old_locus_tag=AB69_3020 NZ_JHDO01000098.1 Protein Homology CDS 42311 43564 . - 0 ID=cds-WP_000016907.1;Parent=gene-AB69_RS08225;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AB69_RS08225;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 43796 45127 . + . ID=gene-AB69_RS08220;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AB69_RS08220;old_locus_tag=AB69_3021 NZ_JHDO01000098.1 Protein Homology CDS 43796 45127 . + 0 ID=cds-WP_000237947.1;Parent=gene-AB69_RS08220;Dbxref=GenBank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AB69_RS08220;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 45189 47015 . - . ID=gene-AB69_RS08215;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AB69_RS08215;old_locus_tag=AB69_3022 NZ_JHDO01000098.1 Protein Homology CDS 45189 47015 . - 0 ID=cds-WP_000775955.1;Parent=gene-AB69_RS08215;Dbxref=GenBank:WP_000775955.1;Name=WP_000775955.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AB69_RS08215;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775955.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 47015 50557 . - . ID=gene-AB69_RS08210;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AB69_RS08210;old_locus_tag=AB69_3023 NZ_JHDO01000098.1 Protein Homology CDS 47015 50557 . - 0 ID=cds-WP_032231422.1;Parent=gene-AB69_RS08210;Dbxref=GenBank:WP_032231422.1;Name=WP_032231422.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AB69_RS08210;product=exodeoxyribonuclease V subunit beta;protein_id=WP_032231422.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 50550 53438 . - . ID=gene-AB69_RS08205;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AB69_RS08205;old_locus_tag=AB69_3024 NZ_JHDO01000098.1 Protein Homology CDS 50550 53438 . - 0 ID=cds-WP_001138201.1;Parent=gene-AB69_RS08205;Dbxref=GenBank:WP_001138201.1;Name=WP_001138201.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AB69_RS08205;product=pitrilysin;protein_id=WP_001138201.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 53614 56982 . - . ID=gene-AB69_RS08200;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AB69_RS08200;old_locus_tag=AB69_3025 NZ_JHDO01000098.1 Protein Homology CDS 53614 56982 . - 0 ID=cds-WP_032231423.1;Parent=gene-AB69_RS08200;Dbxref=GenBank:WP_032231423.1;Name=WP_032231423.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AB69_RS08200;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_032231423.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 56995 57318 . - . ID=gene-AB69_RS08195;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AB69_RS08195;old_locus_tag=AB69_3026 NZ_JHDO01000098.1 Protein Homology CDS 56995 57318 . - 0 ID=cds-WP_001276460.1;Parent=gene-AB69_RS08195;Dbxref=GenBank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AB69_RS08195;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276460.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 57303 57710 . - . ID=gene-AB69_RS08190;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AB69_RS08190;old_locus_tag=AB69_3027 NZ_JHDO01000098.1 Protein Homology CDS 57303 57710 . - 0 ID=cds-WP_001078380.1;Parent=gene-AB69_RS08190;Dbxref=GenBank:WP_001078380.1;Name=WP_001078380.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AB69_RS08190;product=DUF2509 family protein;protein_id=WP_001078380.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 57707 58270 . - . ID=gene-AB69_RS08185;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AB69_RS08185;old_locus_tag=AB69_3028 NZ_JHDO01000098.1 Protein Homology CDS 57707 58270 . - 0 ID=cds-WP_001144315.1;Parent=gene-AB69_RS08185;Dbxref=GenBank:WP_001144315.1;Name=WP_001144315.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417302.1;locus_tag=AB69_RS08185;product=prepilin peptidase-dependent protein;protein_id=WP_001144315.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 58261 58731 . - . ID=gene-AB69_RS08180;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AB69_RS08180;old_locus_tag=AB69_3029 NZ_JHDO01000098.1 Protein Homology CDS 58261 58731 . - 0 ID=cds-WP_000857051.1;Parent=gene-AB69_RS08180;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AB69_RS08180;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 58915 59709 . - . ID=gene-AB69_RS08175;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AB69_RS08175;old_locus_tag=AB69_3031 NZ_JHDO01000098.1 Protein Homology CDS 58915 59709 . - 0 ID=cds-WP_000816232.1;Parent=gene-AB69_RS08175;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AB69_RS08175;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 59716 60591 . - . ID=gene-AB69_RS08170;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AB69_RS08170;old_locus_tag=AB69_3032 NZ_JHDO01000098.1 Protein Homology CDS 59716 60591 . - 0 ID=cds-WP_000204658.1;Parent=gene-AB69_RS08170;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AB69_RS08170;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 60742 62988 . - . ID=gene-AB69_RS08165;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB69_RS08165;old_locus_tag=AB69_3033 NZ_JHDO01000098.1 Protein Homology CDS 60742 62988 . - 0 ID=cds-WP_000957910.1;Parent=gene-AB69_RS08165;Dbxref=GenBank:WP_000957910.1;Name=WP_000957910.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417306.1;locus_tag=AB69_RS08165;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957910.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 63001 63531 . - . ID=gene-AB69_RS08160;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AB69_RS08160;old_locus_tag=AB69_3034 NZ_JHDO01000098.1 Protein Homology CDS 63001 63531 . - 0 ID=cds-WP_000564489.1;Parent=gene-AB69_RS08160;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AB69_RS08160;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 63884 64030 . - . ID=gene-AB69_RS30605;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AB69_RS30605 NZ_JHDO01000098.1 Protein Homology CDS 63884 64030 . - 0 ID=cds-WP_000953278.1;Parent=gene-AB69_RS30605;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AB69_RS30605;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 64216 64905 . + . ID=gene-AB69_RS08150;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AB69_RS08150;old_locus_tag=AB69_3036 NZ_JHDO01000098.1 Protein Homology CDS 64216 64905 . + 0 ID=cds-WP_000082201.1;Parent=gene-AB69_RS08150;Dbxref=GenBank:WP_000082201.1;Name=WP_000082201.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417308.1;locus_tag=AB69_RS08150;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082201.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 64974 65687 . + . ID=gene-AB69_RS08145;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AB69_RS08145;old_locus_tag=AB69_3037 NZ_JHDO01000098.1 Protein Homology CDS 64974 65687 . + 0 ID=cds-WP_000895624.1;Parent=gene-AB69_RS08145;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AB69_RS08145;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 65825 66043 . + . ID=gene-AB69_RS08140;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AB69_RS08140;old_locus_tag=AB69_3038 NZ_JHDO01000098.1 Protein Homology CDS 65825 66043 . + 0 ID=cds-WP_000758655.1;Parent=gene-AB69_RS08140;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AB69_RS08140;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 66151 67191 . + . ID=gene-AB69_RS08135;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AB69_RS08135;old_locus_tag=AB69_3039 NZ_JHDO01000098.1 Protein Homology CDS 66151 67191 . + 0 ID=cds-WP_032231425.1;Parent=gene-AB69_RS08135;Dbxref=GenBank:WP_032231425.1;Name=WP_032231425.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AB69_RS08135;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_032231425.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 67223 68416 . - . ID=gene-AB69_RS08130;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AB69_RS08130;old_locus_tag=AB69_3040 NZ_JHDO01000098.1 Protein Homology CDS 67223 68416 . - 0 ID=cds-WP_000004616.1;Parent=gene-AB69_RS08130;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AB69_RS08130;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 68409 70568 . - . ID=gene-AB69_RS08125;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AB69_RS08125;old_locus_tag=AB69_3041 NZ_JHDO01000098.1 Protein Homology CDS 68409 70568 . - 0 ID=cds-WP_000899054.1;Parent=gene-AB69_RS08125;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AB69_RS08125;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 71153 72184 . + . ID=gene-AB69_RS08120;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AB69_RS08120;old_locus_tag=AB69_3042 NZ_JHDO01000098.1 Protein Homology CDS 71153 72184 . + 0 ID=cds-WP_000201063.1;Parent=gene-AB69_RS08120;Dbxref=GenBank:WP_000201063.1;Name=WP_000201063.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AB69_RS08120;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201063.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 72191 73453 . - . ID=gene-AB69_RS08115;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AB69_RS08115;old_locus_tag=AB69_3043 NZ_JHDO01000098.1 Protein Homology CDS 72191 73453 . - 0 ID=cds-WP_001120711.1;Parent=gene-AB69_RS08115;Dbxref=GenBank:WP_001120711.1;Name=WP_001120711.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AB69_RS08115;product=diaminopimelate decarboxylase;protein_id=WP_001120711.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 73575 74510 . + . ID=gene-AB69_RS08110;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AB69_RS08110;old_locus_tag=AB69_3044 NZ_JHDO01000098.1 Protein Homology CDS 73575 74510 . + 0 ID=cds-WP_000741828.1;Parent=gene-AB69_RS08110;Dbxref=GenBank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AB69_RS08110;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 74497 75189 . - . ID=gene-AB69_RS08105;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AB69_RS08105;old_locus_tag=AB69_3045 NZ_JHDO01000098.1 Protein Homology CDS 74497 75189 . - 0 ID=cds-WP_000848664.1;Parent=gene-AB69_RS08105;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AB69_RS08105;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 75318 76736 . - . ID=gene-AB69_RS08100;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AB69_RS08100;old_locus_tag=AB69_3046 NZ_JHDO01000098.1 Protein Homology CDS 75318 76736 . - 0 ID=cds-WP_000256438.1;Parent=gene-AB69_RS08100;Dbxref=GenBank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AB69_RS08100;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 77051 77812 . - . ID=gene-AB69_RS08095;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AB69_RS08095;old_locus_tag=AB69_3047 NZ_JHDO01000098.1 Protein Homology CDS 77051 77812 . - 0 ID=cds-WP_000603502.1;Parent=gene-AB69_RS08095;Dbxref=GenBank:WP_000603502.1;Name=WP_000603502.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=AB69_RS08095;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603502.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 77842 78678 . - . ID=gene-AB69_RS08090;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AB69_RS08090;old_locus_tag=AB69_3048 NZ_JHDO01000098.1 Protein Homology CDS 77842 78678 . - 0 ID=cds-WP_032231427.1;Parent=gene-AB69_RS08090;Dbxref=GenBank:WP_032231427.1;Name=WP_032231427.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AB69_RS08090;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_032231427.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 78965 80146 . - . ID=gene-AB69_RS08085;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AB69_RS08085;old_locus_tag=AB69_3049 NZ_JHDO01000098.1 Protein Homology CDS 78965 80146 . - 0 ID=cds-WP_000656030.1;Parent=gene-AB69_RS08085;Dbxref=GenBank:WP_000656030.1;Name=WP_000656030.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AB69_RS08085;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000656030.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 80401 81630 . + . ID=gene-AB69_RS08080;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AB69_RS08080;old_locus_tag=AB69_3050 NZ_JHDO01000098.1 Protein Homology CDS 80401 81630 . + 0 ID=cds-WP_000065950.1;Parent=gene-AB69_RS08080;Dbxref=GenBank:WP_000065950.1;Name=WP_000065950.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AB69_RS08080;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 82090 82722 . + . ID=gene-AB69_RS08075;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AB69_RS08075;old_locus_tag=AB69_3051 NZ_JHDO01000098.1 Protein Homology CDS 82090 82722 . + 0 ID=cds-WP_001305805.1;Parent=gene-AB69_RS08075;Dbxref=GenBank:WP_001305805.1;Name=WP_001305805.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AB69_RS08075;product=helix-turn-helix transcriptional regulator;protein_id=WP_001305805.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 83056 83865 . + . ID=gene-AB69_RS08070;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AB69_RS08070;old_locus_tag=AB69_3053 NZ_JHDO01000098.1 Protein Homology CDS 83056 83865 . + 0 ID=cds-WP_001300710.1;Parent=gene-AB69_RS08070;Dbxref=GenBank:WP_001300710.1;Name=WP_001300710.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AB69_RS08070;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001300710.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 83858 84340 . + . ID=gene-AB69_RS08065;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=AB69_RS08065;old_locus_tag=AB69_3054 NZ_JHDO01000098.1 Protein Homology CDS 83858 84340 . + 0 ID=cds-WP_000568339.1;Parent=gene-AB69_RS08065;Dbxref=GenBank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AB69_RS08065;product=protein YqeJ;protein_id=WP_000568339.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 84373 84453 . - . ID=gene-AB69_RS28870;Name=AB69_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28870 NZ_JHDO01000098.1 Protein Homology CDS 84373 84453 . - 0 ID=cds-WP_000655820.1;Parent=gene-AB69_RS28870;Dbxref=GenBank:WP_000655820.1;Name=WP_000655820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AB69_RS28870;product=hypothetical protein;protein_id=WP_000655820.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 84489 84914 . - . ID=gene-AB69_RS0124890;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AB69_RS0124890 NZ_JHDO01000098.1 Protein Homology CDS 84489 84914 . - 0 ID=cds-WP_000350612.1;Parent=gene-AB69_RS0124890;Dbxref=GenBank:WP_000350612.1;Name=WP_000350612.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AB69_RS0124890;product=protein YqeK;protein_id=WP_000350612.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 85108 85597 . + . ID=gene-AB69_RS0124895;Name=AB69_RS0124895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124895;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 85108 85597 . + 0 ID=cds-AB69_RS0124895;Parent=gene-AB69_RS0124895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AB69_RS0124895;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 85822 86313 . + . ID=gene-AB69_RS08060;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;locus_tag=AB69_RS08060;old_locus_tag=AB69_3057 NZ_JHDO01000098.1 Protein Homology CDS 85822 86313 . + 0 ID=cds-WP_032231428.1;Parent=gene-AB69_RS08060;Dbxref=GenBank:WP_032231428.1;Name=WP_032231428.1;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AB69_RS08060;product=tetratricopeptide repeat protein;protein_id=WP_032231428.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 86648 88024 . + . ID=gene-AB69_RS08055;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AB69_RS08055;old_locus_tag=AB69_3058 NZ_JHDO01000098.1 Protein Homology CDS 86648 88024 . + 0 ID=cds-WP_000362702.1;Parent=gene-AB69_RS08055;Dbxref=GenBank:WP_000362702.1;Name=WP_000362702.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AB69_RS08055;product=HilA family transcriptional regulator YgeH;protein_id=WP_000362702.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 88192 88410 . + . ID=gene-AB69_RS08050;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=AB69_RS08050;old_locus_tag=AB69_3059 NZ_JHDO01000098.1 Protein Homology CDS 88192 88410 . + 0 ID=cds-WP_000184091.1;Parent=gene-AB69_RS08050;Dbxref=GenBank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AB69_RS08050;product=protein YgeI;protein_id=WP_000184091.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 88493 88995 . + . ID=gene-AB69_RS0124900;Name=AB69_RS0124900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124900;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 88493 88995 . + 0 ID=cds-AB69_RS0124900;Parent=gene-AB69_RS0124900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843029.1;locus_tag=AB69_RS0124900;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 89014 89646 . - . ID=gene-AB69_RS0124905;Name=AB69_RS0124905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124905;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 89014 89646 . - 0 ID=cds-AB69_RS0124905;Parent=gene-AB69_RS0124905;Note=internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AB69_RS0124905;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 89868 90574 . - . ID=gene-AB69_RS30890;Name=AB69_RS30890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30890;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 89868 90574 . - 0 ID=cds-AB69_RS30890;Parent=gene-AB69_RS30890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842356.1;locus_tag=AB69_RS30890;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 90516 91097 . - . ID=gene-AB69_RS27435;Name=AB69_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS27435 NZ_JHDO01000098.1 Protein Homology CDS 90516 91097 . - 0 ID=cds-WP_001333803.1;Parent=gene-AB69_RS27435;Dbxref=GenBank:WP_001333803.1;Name=WP_001333803.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AB69_RS27435;product=type III secretion apparatus protein OrgA/MxiK;protein_id=WP_001333803.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 91113 91298 . - . ID=gene-AB69_RS27440;Name=AB69_RS27440;end_range=91298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27440;partial=true;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 91113 91298 . - 0 ID=cds-AB69_RS27440;Parent=gene-AB69_RS27440;Note=required for invasion of epithelial cells%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=91298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AB69_RS27440;partial=true;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 91310 92011 . - . ID=gene-AB69_RS08025;Name=AB69_RS08025;end_range=92011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS08025;old_locus_tag=AB69_3065;partial=true;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 91310 92011 . - 0 ID=cds-AB69_RS08025;Parent=gene-AB69_RS08025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=92011,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS08025;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 92235 92729 . + . ID=gene-AB69_RS0124910;Name=AB69_RS0124910;end_range=92729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124910;old_locus_tag=AB69_3066;partial=true;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 92235 92729 . + 0 ID=cds-AB69_RS0124910;Parent=gene-AB69_RS0124910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=92729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823236.1;locus_tag=AB69_RS0124910;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 92734 92877 . - . ID=gene-AB69_RS0124915;Name=AB69_RS0124915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0124915;partial=true;pseudo=true;start_range=.,92734 NZ_JHDO01000098.1 Protein Homology CDS 92734 92877 . - 0 ID=cds-AB69_RS0124915;Parent=gene-AB69_RS0124915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556209.1;locus_tag=AB69_RS0124915;partial=true;product=putative zinc ribbon protein;pseudo=true;start_range=.,92734;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 92865 93266 . - . ID=gene-AB69_RS08020;Name=AB69_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08020;old_locus_tag=AB69_3067 NZ_JHDO01000098.1 Protein Homology CDS 92865 93266 . - 0 ID=cds-WP_000270962.1;Parent=gene-AB69_RS08020;Dbxref=GenBank:WP_000270962.1;Name=WP_000270962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020115.1;locus_tag=AB69_RS08020;product=putative zinc ribbon protein;protein_id=WP_000270962.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 93526 93651 . - . ID=gene-AB69_RS27450;Name=AB69_RS27450;end_range=93651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27450;old_locus_tag=AB69_3068;partial=true;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 93526 93651 . - 0 ID=cds-AB69_RS27450;Parent=gene-AB69_RS27450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB69_RS27450;partial=true;product=YagK/YfjJ domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 93772 95256 . - . ID=gene-AB69_RS08015;Name=AB69_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08015;old_locus_tag=AB69_3069 NZ_JHDO01000098.1 Protein Homology CDS 93772 95256 . - 0 ID=cds-WP_001297234.1;Parent=gene-AB69_RS08015;Dbxref=GenBank:WP_001297234.1;Name=WP_001297234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=AB69_RS08015;product=YfjI family protein;protein_id=WP_001297234.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 96486 97151 . + . ID=gene-AB69_RS08010;Name=AB69_RS08010;end_range=97151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS08010;old_locus_tag=AB69_3073;partial=true;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 96486 97151 . + 0 ID=cds-AB69_RS08010;Parent=gene-AB69_RS08010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003924,GO:0005525;end_range=97151,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB69_RS08010;partial=true;product=GTPase family protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 97199 97840 . + . ID=gene-AB69_RS08005;Name=AB69_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08005;old_locus_tag=AB69_3074 NZ_JHDO01000098.1 Protein Homology CDS 97199 97840 . + 0 ID=cds-WP_000439687.1;Parent=gene-AB69_RS08005;Dbxref=GenBank:WP_000439687.1;Name=WP_000439687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439687.1;locus_tag=AB69_RS08005;product=L-fuculose-phosphate aldolase;protein_id=WP_000439687.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 98102 98947 . + . ID=gene-AB69_RS08000;Name=AB69_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS08000;old_locus_tag=AB69_3075 NZ_JHDO01000098.1 Protein Homology CDS 98102 98947 . + 0 ID=cds-WP_016247886.1;Parent=gene-AB69_RS08000;Dbxref=GenBank:WP_016247886.1;Name=WP_016247886.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247886.1;locus_tag=AB69_RS08000;product=GRP family sugar transporter;protein_id=WP_016247886.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 98988 99974 . - . ID=gene-AB69_RS07995;Name=yjhU;gbkey=Gene;gene=yjhU;gene_biotype=protein_coding;locus_tag=AB69_RS07995;old_locus_tag=AB69_3076 NZ_JHDO01000098.1 Protein Homology CDS 98988 99974 . - 0 ID=cds-WP_000373366.1;Parent=gene-AB69_RS07995;Dbxref=GenBank:WP_000373366.1;Name=WP_000373366.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;gene=yjhU;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418715.2;locus_tag=AB69_RS07995;product=sugar-binding transcriptional regulator;protein_id=WP_000373366.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 100321 101670 . - . ID=gene-AB69_RS07990;Name=yjhF;gbkey=Gene;gene=yjhF;gene_biotype=protein_coding;locus_tag=AB69_RS07990;old_locus_tag=AB69_3078 NZ_JHDO01000098.1 Protein Homology CDS 100321 101670 . - 0 ID=cds-WP_001128363.1;Parent=gene-AB69_RS07990;Dbxref=GenBank:WP_001128363.1;Name=WP_001128363.1;gbkey=CDS;gene=yjhF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418716.1;locus_tag=AB69_RS07990;product=GntP family permease;protein_id=WP_001128363.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 101777 103744 . - . ID=gene-AB69_RS07985;Name=yjhG;gbkey=Gene;gene=yjhG;gene_biotype=protein_coding;locus_tag=AB69_RS07985;old_locus_tag=AB69_3079 NZ_JHDO01000098.1 Protein Homology CDS 101777 103744 . - 0 ID=cds-WP_000116326.1;Parent=gene-AB69_RS07985;Dbxref=GenBank:WP_000116326.1;Name=WP_000116326.1;gbkey=CDS;gene=yjhG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418717.1;locus_tag=AB69_RS07985;product=xylonate dehydratase YjhG;protein_id=WP_000116326.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 103755 104660 . - . ID=gene-AB69_RS07980;Name=yjhH;gbkey=Gene;gene=yjhH;gene_biotype=protein_coding;locus_tag=AB69_RS07980;old_locus_tag=AB69_3080 NZ_JHDO01000098.1 Protein Homology CDS 103755 104660 . - 0 ID=cds-WP_001335841.1;Parent=gene-AB69_RS07980;Dbxref=GenBank:WP_001335841.1;Name=WP_001335841.1;gbkey=CDS;gene=yjhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418718.4;locus_tag=AB69_RS07980;product=dihydrodipicolinate synthase family protein;protein_id=WP_001335841.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 104665 105453 . - . ID=gene-AB69_RS07975;Name=yjhI;gbkey=Gene;gene=yjhI;gene_biotype=protein_coding;locus_tag=AB69_RS07975;old_locus_tag=AB69_3081 NZ_JHDO01000098.1 Protein Homology CDS 104665 105453 . - 0 ID=cds-WP_000251798.1;Parent=gene-AB69_RS07975;Dbxref=GenBank:WP_000251798.1;Name=WP_000251798.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yjhI;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418719.1;locus_tag=AB69_RS07975;product=IclR family transcriptional regulator;protein_id=WP_000251798.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 105756 106538 . - . ID=gene-AB69_RS07970;Name=sgcR;gbkey=Gene;gene=sgcR;gene_biotype=protein_coding;locus_tag=AB69_RS07970;old_locus_tag=AB69_3083 NZ_JHDO01000098.1 Protein Homology CDS 105756 106538 . - 0 ID=cds-WP_000082780.1;Parent=gene-AB69_RS07970;Dbxref=GenBank:WP_000082780.1;Name=WP_000082780.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=sgcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418720.1;locus_tag=AB69_RS07970;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000082780.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 106555 107187 . - . ID=gene-AB69_RS07965;Name=sgcE;gbkey=Gene;gene=sgcE;gene_biotype=protein_coding;locus_tag=AB69_RS07965;old_locus_tag=AB69_3084 NZ_JHDO01000098.1 Protein Homology CDS 106555 107187 . - 0 ID=cds-WP_000600622.1;Parent=gene-AB69_RS07965;Dbxref=GenBank:WP_000600622.1;Name=WP_000600622.1;gbkey=CDS;gene=sgcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418721.1;locus_tag=AB69_RS07965;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600622.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 107199 107630 . - . ID=gene-AB69_RS07960;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=AB69_RS07960;old_locus_tag=AB69_3085 NZ_JHDO01000098.1 Protein Homology CDS 107199 107630 . - 0 ID=cds-WP_000606406.1;Parent=gene-AB69_RS07960;Dbxref=GenBank:WP_000606406.1;Name=WP_000606406.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418722.1;locus_tag=AB69_RS07960;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606406.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 107761 108567 . - . ID=gene-AB69_RS07955;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=AB69_RS07955;old_locus_tag=AB69_3086 NZ_JHDO01000098.1 Protein Homology CDS 107761 108567 . - 0 ID=cds-WP_000118626.1;Parent=gene-AB69_RS07955;Dbxref=GenBank:WP_000118626.1;Name=WP_000118626.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418723.1;locus_tag=AB69_RS07955;product=BtpA family protein SgcQ;protein_id=WP_000118626.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 108580 109893 . - . ID=gene-AB69_RS07950;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=AB69_RS07950;old_locus_tag=AB69_3087 NZ_JHDO01000098.1 Protein Homology CDS 108580 109893 . - 0 ID=cds-WP_000460843.1;Parent=gene-AB69_RS07950;Dbxref=GenBank:WP_000460843.1;Name=WP_000460843.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418724.1;locus_tag=AB69_RS07950;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460843.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 109905 110183 . - . ID=gene-AB69_RS07945;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=AB69_RS07945;old_locus_tag=AB69_3088 NZ_JHDO01000098.1 Protein Homology CDS 109905 110183 . - 0 ID=cds-WP_000722973.1;Parent=gene-AB69_RS07945;Dbxref=GenBank:WP_000722973.1;Name=WP_000722973.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588476.1;locus_tag=AB69_RS07945;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000722973.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 110180 111301 . - . ID=gene-AB69_RS07940;Name=sgcX;gbkey=Gene;gene=sgcX;gene_biotype=protein_coding;locus_tag=AB69_RS07940;old_locus_tag=AB69_3089 NZ_JHDO01000098.1 Protein Homology CDS 110180 111301 . - 0 ID=cds-WP_000010829.1;Parent=gene-AB69_RS07940;Dbxref=GenBank:WP_000010829.1;Name=WP_000010829.1;gbkey=CDS;gene=sgcX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418725.4;locus_tag=AB69_RS07940;product=M42 family metallopeptidase;protein_id=WP_000010829.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 111546 111662 . - . ID=gene-AB69_RS30035;Name=AB69_RS30035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30035;partial=true;pseudo=true;start_range=.,111546 NZ_JHDO01000098.1 Protein Homology CDS 111546 111662 . - 0 ID=cds-AB69_RS30035;Parent=gene-AB69_RS30035;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=AB69_RS30035;partial=true;product=VOC family protein;pseudo=true;start_range=.,111546;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 111700 111918 . - . ID=gene-AB69_RS28885;Name=AB69_RS28885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28885;pseudo=true NZ_JHDO01000098.1 Protein Homology CDS 111700 111918 . - 0 ID=cds-AB69_RS28885;Parent=gene-AB69_RS28885;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348444.1;locus_tag=AB69_RS28885;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 112087 112833 . - . ID=gene-AB69_RS07935;Name=yjhP;gbkey=Gene;gene=yjhP;gene_biotype=protein_coding;locus_tag=AB69_RS07935;old_locus_tag=AB69_3090 NZ_JHDO01000098.1 Protein Homology CDS 112087 112833 . - 0 ID=cds-WP_000354251.1;Parent=gene-AB69_RS07935;Dbxref=GenBank:WP_000354251.1;Name=WP_000354251.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yjhP;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418726.1;locus_tag=AB69_RS07935;product=SAM-dependent methyltransferase;protein_id=WP_000354251.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 112889 113434 . - . ID=gene-AB69_RS07930;Name=yjhQ;gbkey=Gene;gene=yjhQ;gene_biotype=protein_coding;locus_tag=AB69_RS07930;old_locus_tag=AB69_3091 NZ_JHDO01000098.1 Protein Homology CDS 112889 113434 . - 0 ID=cds-WP_032231604.1;Parent=gene-AB69_RS07930;Dbxref=GenBank:WP_032231604.1;Name=WP_032231604.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjhQ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418727.1;locus_tag=AB69_RS07930;product=GNAT family N-acetyltransferase;protein_id=WP_032231604.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 113446 113703 . - . ID=gene-AB69_RS07925;Name=topAI;gbkey=Gene;gene=topAI;gene_biotype=protein_coding;locus_tag=AB69_RS07925;old_locus_tag=AB69_3092 NZ_JHDO01000098.1 Protein Homology CDS 113446 113703 . - 0 ID=cds-WP_001054376.1;Parent=gene-AB69_RS07925;Dbxref=GenBank:WP_001054376.1;Name=WP_001054376.1;gbkey=CDS;gene=topAI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588477.1;locus_tag=AB69_RS07925;product=YjhX family toxin;protein_id=WP_001054376.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 114194 114325 . - . ID=gene-AB69_RS30410;Name=AB69_RS30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30410;old_locus_tag=AB69_3093 NZ_JHDO01000098.1 GeneMarkS-2+ CDS 114194 114325 . - 0 ID=cds-WP_001309182.1;Parent=gene-AB69_RS30410;Dbxref=GenBank:WP_001309182.1;Name=WP_001309182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30410;product=hypothetical protein;protein_id=WP_001309182.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 114441 115681 . + . ID=gene-AB69_RS0124925;Name=yjhR;gbkey=Gene;gene=yjhR;gene_biotype=pseudogene;locus_tag=AB69_RS0124925;partial=true;pseudo=true;start_range=.,114441 NZ_JHDO01000098.1 Protein Homology CDS 114441 115681 . + 0 ID=cds-AB69_RS0124925;Parent=gene-AB69_RS0124925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yjhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176259710.1;locus_tag=AB69_RS0124925;partial=true;product=helicase YjhR;pseudo=true;start_range=.,114441;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 115949 116154 . - . ID=gene-AB69_RS30415;Name=AB69_RS30415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30415;partial=true;pseudo=true;start_range=.,115949 NZ_JHDO01000098.1 Protein Homology CDS 115949 116154 . - 0 ID=cds-AB69_RS30415;Parent=gene-AB69_RS30415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168579.1;locus_tag=AB69_RS30415;partial=true;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;start_range=.,115949;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 116247 116345 . + . ID=gene-AB69_RS30895;Name=AB69_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30895 NZ_JHDO01000098.1 Protein Homology CDS 116247 116345 . + 0 ID=cds-WP_211180523.1;Parent=gene-AB69_RS30895;Dbxref=GenBank:WP_211180523.1;Name=WP_211180523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AB69_RS30895;product=protein YthB;protein_id=WP_211180523.1;transl_table=11 NZ_JHDO01000098.1 RefSeq pseudogene 116630 117244 . - . ID=gene-AB69_RS30900;Name=AB69_RS30900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30900;partial=true;pseudo=true;start_range=.,116630 NZ_JHDO01000098.1 Protein Homology CDS 116630 117244 . - 0 ID=cds-AB69_RS30900;Parent=gene-AB69_RS30900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AB69_RS30900;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,116630;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 117309 118415 . - . ID=gene-AB69_RS07905;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AB69_RS07905;old_locus_tag=AB69_3097 NZ_JHDO01000098.1 Protein Homology CDS 117309 118415 . - 0 ID=cds-WP_001309184.1;Parent=gene-AB69_RS07905;Dbxref=GenBank:WP_001309184.1;Name=WP_001309184.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AB69_RS07905;product=N-acetylneuraminate epimerase;protein_id=WP_001309184.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 118435 119151 . - . ID=gene-AB69_RS07900;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AB69_RS07900;old_locus_tag=AB69_3098 NZ_JHDO01000098.1 Protein Homology CDS 118435 119151 . - 0 ID=cds-WP_001295734.1;Parent=gene-AB69_RS07900;Dbxref=GenBank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AB69_RS07900;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 120607 121209 . + . ID=gene-AB69_RS07895;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AB69_RS07895;old_locus_tag=AB69_3100 NZ_JHDO01000098.1 Protein Homology CDS 120607 121209 . + 0 ID=cds-WP_032231605.1;Parent=gene-AB69_RS07895;Dbxref=GenBank:WP_032231605.1;Name=WP_032231605.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB69_RS07895;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_032231605.1;transl_table=11 NZ_JHDO01000098.1 RefSeq gene 121687 122283 . + . ID=gene-AB69_RS07890;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB69_RS07890;old_locus_tag=AB69_3101 NZ_JHDO01000098.1 Protein Homology CDS 121687 122283 . + 0 ID=cds-WP_000044711.1-2;Parent=gene-AB69_RS07890;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB69_RS07890;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 ##sequence-region NZ_JHDO01000099.1 1 6084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000099.1 RefSeq region 1 6084 . + . ID=NZ_JHDO01000099.1:1..6084;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000099.1 RefSeq pseudogene 1 202 . + . ID=gene-AB69_RS07885;Name=AB69_RS07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS07885;old_locus_tag=AB69_3102;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000099.1 Protein Homology CDS 1 202 . + 1 ID=cds-AB69_RS07885;Parent=gene-AB69_RS07885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312349.3;locus_tag=AB69_RS07885;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 206 763 . - . ID=gene-AB69_RS07880;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AB69_RS07880;old_locus_tag=AB69_3103 NZ_JHDO01000099.1 Protein Homology CDS 206 763 . - 0 ID=cds-WP_001245295.1;Parent=gene-AB69_RS07880;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AB69_RS07880;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 836 1501 . - . ID=gene-AB69_RS07875;Name=AB69_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07875;old_locus_tag=AB69_3104 NZ_JHDO01000099.1 Protein Homology CDS 836 1501 . - 0 ID=cds-WP_001100469.1;Parent=gene-AB69_RS07875;Dbxref=GenBank:WP_001100469.1;Name=WP_001100469.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AB69_RS07875;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 1722 1967 . + . ID=gene-AB69_RS07870;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AB69_RS07870;old_locus_tag=AB69_3105 NZ_JHDO01000099.1 Protein Homology CDS 1722 1967 . + 0 ID=cds-WP_000130621.1;Parent=gene-AB69_RS07870;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AB69_RS07870;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 2069 4267 . - . ID=gene-AB69_RS07865;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AB69_RS07865;old_locus_tag=AB69_3106 NZ_JHDO01000099.1 Protein Homology CDS 2069 4267 . - 0 ID=cds-WP_032231361.1;Parent=gene-AB69_RS07865;Dbxref=GenBank:WP_032231361.1;Name=WP_032231361.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417926.1;locus_tag=AB69_RS07865;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032231361.1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 4341 4967 . - . ID=gene-AB69_RS07860;Name=AB69_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07860;old_locus_tag=AB69_3107 NZ_JHDO01000099.1 Protein Homology CDS 4341 4967 . - 0 ID=cds-WP_000964718.1;Parent=gene-AB69_RS07860;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AB69_RS07860;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JHDO01000099.1 RefSeq gene 5108 5467 . + . ID=gene-AB69_RS07855;Name=AB69_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07855;old_locus_tag=AB69_3108 NZ_JHDO01000099.1 Protein Homology CDS 5108 5467 . + 0 ID=cds-WP_000042895.1;Parent=gene-AB69_RS07855;Dbxref=GenBank:WP_000042895.1;Name=WP_000042895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417924.1;locus_tag=AB69_RS07855;product=DUF2500 domain-containing protein;protein_id=WP_000042895.1;transl_table=11 NZ_JHDO01000099.1 RefSeq pseudogene 5532 6084 . + . ID=gene-AB69_RS28895;Name=AB69_RS28895;end_range=6084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28895;partial=true;pseudo=true NZ_JHDO01000099.1 Protein Homology CDS 5532 6084 . + 0 ID=cds-AB69_RS28895;Parent=gene-AB69_RS28895;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=6084,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28895;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000100.1 1 307821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000100.1 RefSeq region 1 307821 . + . ID=NZ_JHDO01000100.1:1..307821;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000100.1 RefSeq gene 1 276 . - . ID=gene-AB69_RS07845;Name=AB69_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07845;old_locus_tag=AB69_3110;partial=true;start_range=.,1 NZ_JHDO01000100.1 Protein Homology CDS 1 276 . - 0 ID=cds-WP_000567732.1;Parent=gene-AB69_RS07845;Dbxref=GenBank:WP_000567732.1;Name=WP_000567732.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS07845;partial=true;product=transposase;protein_id=WP_000567732.1;start_range=.,1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 367 906 . - . ID=gene-AB69_RS07840;Name=AB69_RS07840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS07840;old_locus_tag=AB69_3111;partial=true;pseudo=true;start_range=.,367 NZ_JHDO01000100.1 Protein Homology CDS 367 906 . - 0 ID=cds-AB69_RS07840;Parent=gene-AB69_RS07840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AB69_RS07840;partial=true;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;pseudo=true;start_range=.,367;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 903 1235 . - . ID=gene-AB69_RS07835;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=AB69_RS07835;old_locus_tag=AB69_3112 NZ_JHDO01000100.1 Protein Homology CDS 903 1235 . - 0 ID=cds-WP_000116719.1;Parent=gene-AB69_RS07835;Dbxref=GenBank:WP_000116719.1;Name=WP_000116719.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311744.1;locus_tag=AB69_RS07835;product=type III secretion system inner rod subunit SctI;protein_id=WP_000116719.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 1255 1494 . - . ID=gene-AB69_RS07830;Name=AB69_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07830;old_locus_tag=AB69_3113 NZ_JHDO01000100.1 Protein Homology CDS 1255 1494 . - 0 ID=cds-WP_000796272.1;Parent=gene-AB69_RS07830;Dbxref=GenBank:WP_000796272.1;Name=WP_000796272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AB69_RS07830;product=type III secretion system needle complex protein;protein_id=WP_000796272.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 1508 2689 . - . ID=gene-AB69_RS07825;Name=AB69_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07825;old_locus_tag=AB69_3114 NZ_JHDO01000100.1 Protein Homology CDS 1508 2689 . - 0 ID=cds-WP_001326506.1;Parent=gene-AB69_RS07825;Dbxref=GenBank:WP_001326506.1;Name=WP_001326506.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AB69_RS07825;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_001326506.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 2946 3446 . + . ID=gene-AB69_RS07820;Name=AB69_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07820;old_locus_tag=AB69_3115 NZ_JHDO01000100.1 Protein Homology CDS 2946 3446 . + 0 ID=cds-WP_001195875.1;Parent=gene-AB69_RS07820;Dbxref=GenBank:WP_001195875.1;Name=WP_001195875.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AB69_RS07820;product=helix-turn-helix transcriptional regulator;protein_id=WP_001195875.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 3448 3741 . + . ID=gene-AB69_RS0124940;Name=AB69_RS0124940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124940 NZ_JHDO01000100.1 Protein Homology CDS 3448 3741 . + 0 ID=cds-WP_000060555.1;Parent=gene-AB69_RS0124940;Dbxref=GenBank:WP_000060555.1;Name=WP_000060555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=AB69_RS0124940;product=invasion protein;protein_id=WP_000060555.1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 3803 4923 . - . ID=gene-AB69_RS07810;Name=AB69_RS07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS07810;old_locus_tag=AB69_3117;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 3803 4923 . - 0 ID=cds-AB69_RS07810;Parent=gene-AB69_RS07810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=AB69_RS07810;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 4932 5699 . - . ID=gene-AB69_RS07805;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AB69_RS07805;old_locus_tag=AB69_3118 NZ_JHDO01000100.1 Protein Homology CDS 4932 5699 . - 0 ID=cds-WP_000503280.1;Parent=gene-AB69_RS07805;Dbxref=GenBank:WP_000503280.1;Name=WP_000503280.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=AB69_RS07805;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000503280.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 5701 5961 . - . ID=gene-AB69_RS07800;Name=AB69_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07800;old_locus_tag=AB69_3119 NZ_JHDO01000100.1 Protein Homology CDS 5701 5961 . - 0 ID=cds-WP_000341004.1;Parent=gene-AB69_RS07800;Dbxref=GenBank:WP_000341004.1;Name=WP_000341004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AB69_RS07800;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000341004.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 5971 6636 . - . ID=gene-AB69_RS0124945;Name=AB69_RS0124945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0124945 NZ_JHDO01000100.1 Protein Homology CDS 5971 6636 . - 0 ID=cds-WP_032231442.1;Parent=gene-AB69_RS0124945;Dbxref=GenBank:WP_032231442.1;Name=WP_032231442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AB69_RS0124945;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_032231442.1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 6626 7613 . - . ID=gene-AB69_RS07795;Name=AB69_RS07795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS07795;old_locus_tag=AB69_3121;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 6626 7613 . - 0 ID=cds-AB69_RS07795;Parent=gene-AB69_RS07795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AB69_RS07795;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 7573 7692 . - . ID=gene-AB69_RS30735;Name=AB69_RS30735;end_range=7692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30735;partial=true;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 7573 7692 . - 0 ID=cds-AB69_RS30735;Parent=gene-AB69_RS30735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344669.1;locus_tag=AB69_RS30735;partial=true;product=type III secretion system needle length determinant%2C SpaN/EivJ family;pseudo=true;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 7705 8475 . - . ID=gene-AB69_RS30610;Name=AB69_RS30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30610;old_locus_tag=AB69_3122 NZ_JHDO01000100.1 GeneMarkS-2+ CDS 7705 8475 . - 0 ID=cds-WP_000200451.1;Parent=gene-AB69_RS30610;Dbxref=GenBank:WP_000200451.1;Name=WP_000200451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30610;product=hypothetical protein;protein_id=WP_000200451.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 8521 9315 . - . ID=gene-AB69_RS30615;Name=ygeQ;gbkey=Gene;gene=ygeQ;gene_biotype=protein_coding;locus_tag=AB69_RS30615;old_locus_tag=AB69_3123 NZ_JHDO01000100.1 Protein Homology CDS 8521 9315 . - 0 ID=cds-WP_000676919.1;Parent=gene-AB69_RS30615;Dbxref=GenBank:WP_000676919.1;Name=WP_000676919.1;gbkey=CDS;gene=ygeQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676919.1;locus_tag=AB69_RS30615;product=protein YgeQ;protein_id=WP_000676919.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 9471 9544 . - . ID=gene-AB69_RS07780;Name=AB69_RS07780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS07780;old_locus_tag=AB69_3124 NZ_JHDO01000100.1 tRNAscan-SE tRNA 9471 9544 . - . ID=rna-AB69_RS07780;Parent=gene-AB69_RS07780;anticodon=(pos:complement(9510..9512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS07780;product=tRNA-Gly NZ_JHDO01000100.1 tRNAscan-SE exon 9471 9544 . - . ID=exon-AB69_RS07780-1;Parent=rna-AB69_RS07780;anticodon=(pos:complement(9510..9512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS07780;product=tRNA-Gly NZ_JHDO01000100.1 RefSeq gene 9623 10378 . - . ID=gene-AB69_RS07775;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AB69_RS07775;old_locus_tag=AB69_3125 NZ_JHDO01000100.1 Protein Homology CDS 9623 10378 . - 0 ID=cds-WP_001301085.1;Parent=gene-AB69_RS07775;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AB69_RS07775;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 10793 13090 . + . ID=gene-AB69_RS07770;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AB69_RS07770;old_locus_tag=AB69_3126 NZ_JHDO01000100.1 Protein Homology CDS 10793 13090 . + 0 ID=cds-WP_001610827.1;Parent=gene-AB69_RS07770;Dbxref=GenBank:WP_001610827.1;Name=WP_001610827.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AB69_RS07770;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_001610827.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 13101 13979 . + . ID=gene-AB69_RS07765;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AB69_RS07765;old_locus_tag=AB69_3127 NZ_JHDO01000100.1 Protein Homology CDS 13101 13979 . + 0 ID=cds-WP_000459182.1;Parent=gene-AB69_RS07765;Dbxref=GenBank:WP_000459182.1;Name=WP_000459182.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=AB69_RS07765;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 13976 14455 . + . ID=gene-AB69_RS07760;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AB69_RS07760;old_locus_tag=AB69_3128 NZ_JHDO01000100.1 Protein Homology CDS 13976 14455 . + 0 ID=cds-WP_001016605.1;Parent=gene-AB69_RS07760;Dbxref=GenBank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AB69_RS07760;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 14495 16273 . - . ID=gene-AB69_RS07755;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AB69_RS07755;old_locus_tag=AB69_3129 NZ_JHDO01000100.1 Protein Homology CDS 14495 16273 . - 0 ID=cds-WP_032231443.1;Parent=gene-AB69_RS07755;Dbxref=GenBank:WP_032231443.1;Name=WP_032231443.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=AB69_RS07755;product=sigma-54 interaction domain-containing protein;protein_id=WP_032231443.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 16752 17939 . + . ID=gene-AB69_RS07750;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AB69_RS07750;old_locus_tag=AB69_3130 NZ_JHDO01000100.1 Protein Homology CDS 16752 17939 . + 0 ID=cds-WP_000859787.1;Parent=gene-AB69_RS07750;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AB69_RS07750;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 17997 19193 . + . ID=gene-AB69_RS07745;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AB69_RS07745;old_locus_tag=AB69_3131 NZ_JHDO01000100.1 Protein Homology CDS 17997 19193 . + 0 ID=cds-WP_000110493.1;Parent=gene-AB69_RS07745;Dbxref=GenBank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AB69_RS07745;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 19251 20462 . + . ID=gene-AB69_RS07740;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AB69_RS07740;old_locus_tag=AB69_3132 NZ_JHDO01000100.1 Protein Homology CDS 19251 20462 . + 0 ID=cds-WP_001107125.1;Parent=gene-AB69_RS07740;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AB69_RS07740;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 20515 21900 . + . ID=gene-AB69_RS07735;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AB69_RS07735;old_locus_tag=AB69_3133 NZ_JHDO01000100.1 Protein Homology CDS 20515 21900 . + 0 ID=cds-WP_001264452.1;Parent=gene-AB69_RS07735;Dbxref=GenBank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AB69_RS07735;product=D-phenylhydantoinase;protein_id=WP_001264452.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 21948 22880 . + . ID=gene-AB69_RS07730;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AB69_RS07730;old_locus_tag=AB69_3134 NZ_JHDO01000100.1 Protein Homology CDS 21948 22880 . + 0 ID=cds-WP_000037992.1;Parent=gene-AB69_RS07730;Dbxref=GenBank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AB69_RS07730;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 23101 24726 . - . ID=gene-AB69_RS07725;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AB69_RS07725;old_locus_tag=AB69_3135 NZ_JHDO01000100.1 Protein Homology CDS 23101 24726 . - 0 ID=cds-WP_001020381.1;Parent=gene-AB69_RS07725;Dbxref=GenBank:WP_001020381.1;Name=WP_001020381.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AB69_RS07725;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_001020381.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 24774 25544 . - . ID=gene-AB69_RS0124950;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AB69_RS0124950 NZ_JHDO01000100.1 Protein Homology CDS 24774 25544 . - 0 ID=cds-WP_032231445.1;Parent=gene-AB69_RS0124950;Dbxref=GenBank:WP_032231445.1;Name=WP_032231445.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AB69_RS0124950;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_032231445.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 25647 26225 . + . ID=gene-AB69_RS07720;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AB69_RS07720;old_locus_tag=AB69_3137 NZ_JHDO01000100.1 Protein Homology CDS 25647 26225 . + 0 ID=cds-WP_032231446.1;Parent=gene-AB69_RS07720;Dbxref=GenBank:WP_032231446.1;Name=WP_032231446.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AB69_RS07720;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_032231446.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 26547 29645 . + . ID=gene-AB69_RS07715;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AB69_RS07715;old_locus_tag=AB69_3138 NZ_JHDO01000100.1 Protein Homology CDS 26547 29645 . + 0 ID=cds-WP_000502395.1;Parent=gene-AB69_RS07715;Dbxref=GenBank:WP_000502395.1;Name=WP_000502395.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AB69_RS07715;product=putative selenate reductase subunit YgfK;protein_id=WP_000502395.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 29648 30976 . + . ID=gene-AB69_RS07710;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AB69_RS07710;old_locus_tag=AB69_3139 NZ_JHDO01000100.1 Protein Homology CDS 29648 30976 . + 0 ID=cds-WP_000906252.1;Parent=gene-AB69_RS07710;Dbxref=GenBank:WP_000906252.1;Name=WP_000906252.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417355.4;locus_tag=AB69_RS07710;product=putative aminohydrolase SsnA;protein_id=WP_000906252.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 31027 31806 . + . ID=gene-AB69_RS07705;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AB69_RS07705;old_locus_tag=AB69_3140 NZ_JHDO01000100.1 Protein Homology CDS 31027 31806 . + 0 ID=cds-WP_000572462.1;Parent=gene-AB69_RS07705;Dbxref=GenBank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AB69_RS07705;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572462.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 31803 34673 . + . ID=gene-AB69_RS07700;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AB69_RS07700;old_locus_tag=AB69_3141 NZ_JHDO01000100.1 Protein Homology CDS 31803 34673 . + 0 ID=cds-WP_000583615.1;Parent=gene-AB69_RS07700;Dbxref=GenBank:WP_000583615.1;Name=WP_000583615.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AB69_RS07700;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583615.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 34838 36238 . + . ID=gene-AB69_RS07695;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AB69_RS07695;old_locus_tag=AB69_3142 NZ_JHDO01000100.1 Protein Homology CDS 34838 36238 . + 0 ID=cds-WP_001280192.1;Parent=gene-AB69_RS07695;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AB69_RS07695;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 36256 37572 . + . ID=gene-AB69_RS07690;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AB69_RS07690;old_locus_tag=AB69_3143 NZ_JHDO01000100.1 Protein Homology CDS 36256 37572 . + 0 ID=cds-WP_001336279.1;Parent=gene-AB69_RS07690;Dbxref=GenBank:WP_001336279.1;Name=WP_001336279.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AB69_RS07690;product=guanine deaminase;protein_id=WP_001336279.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 37608 38975 . + . ID=gene-AB69_RS07685;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AB69_RS07685;old_locus_tag=AB69_3144 NZ_JHDO01000100.1 Protein Homology CDS 37608 38975 . + 0 ID=cds-WP_000012163.1;Parent=gene-AB69_RS07685;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AB69_RS07685;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 39011 39499 . - . ID=gene-AB69_RS07680;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AB69_RS07680;old_locus_tag=AB69_3145 NZ_JHDO01000100.1 Protein Homology CDS 39011 39499 . - 0 ID=cds-WP_000838428.1;Parent=gene-AB69_RS07680;Dbxref=GenBank:WP_000838428.1;Name=WP_000838428.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AB69_RS07680;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 39499 41418 . - . ID=gene-AB69_RS07675;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AB69_RS07675;old_locus_tag=AB69_3146 NZ_JHDO01000100.1 Protein Homology CDS 39499 41418 . - 0 ID=cds-WP_001350545.1;Parent=gene-AB69_RS07675;Dbxref=GenBank:WP_001350545.1;Name=WP_001350545.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AB69_RS07675;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_001350545.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 41854 43302 . + . ID=gene-AB69_RS07670;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AB69_RS07670;old_locus_tag=AB69_3147 NZ_JHDO01000100.1 Protein Homology CDS 41854 43302 . + 0 ID=cds-WP_001295374.1;Parent=gene-AB69_RS07670;Dbxref=GenBank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AB69_RS07670;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 43304 43429 . + . ID=gene-AB69_RS07665;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AB69_RS07665;old_locus_tag=AB69_3148 NZ_JHDO01000100.1 Protein Homology CDS 43304 43429 . + 0 ID=cds-WP_001010156.1;Parent=gene-AB69_RS07665;Dbxref=GenBank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AB69_RS07665;product=protein YqfG;protein_id=WP_001010156.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 43426 43497 . - . ID=gene-AB69_RS29870;Name=AB69_RS29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29870 NZ_JHDO01000100.1 Protein Homology CDS 43426 43497 . - 0 ID=cds-WP_120795390.1;Parent=gene-AB69_RS29870;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AB69_RS29870;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 43552 44100 . + . ID=gene-AB69_RS07660;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AB69_RS07660;old_locus_tag=AB69_3149 NZ_JHDO01000100.1 Protein Homology CDS 43552 44100 . + 0 ID=cds-WP_001192820.1;Parent=gene-AB69_RS07660;Dbxref=GenBank:WP_001192820.1;Name=WP_001192820.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417365.1;locus_tag=AB69_RS07660;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192820.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 44144 45661 . - . ID=gene-AB69_RS07655;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB69_RS07655;old_locus_tag=AB69_3150 NZ_JHDO01000100.1 Protein Homology CDS 44144 45661 . - 0 ID=cds-WP_000003071.1;Parent=gene-AB69_RS07655;Dbxref=GenBank:WP_000003071.1;Name=WP_000003071.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB69_RS07655;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 45671 46769 . - . ID=gene-AB69_RS07650;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AB69_RS07650;old_locus_tag=AB69_3151 NZ_JHDO01000100.1 Protein Homology CDS 46695 46769 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB69_RS07650;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB69_RS07650;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDO01000100.1 Protein Homology CDS 45671 46693 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB69_RS07650;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB69_RS07650;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 46860 48593 . - . ID=gene-AB69_RS07645;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AB69_RS07645;old_locus_tag=AB69_3153 NZ_JHDO01000100.1 Protein Homology CDS 46860 48593 . - 0 ID=cds-WP_032235700.1;Parent=gene-AB69_RS07645;Dbxref=GenBank:WP_032235700.1;Name=WP_032235700.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417368.1;locus_tag=AB69_RS07645;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032235700.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 48599 49309 . - . ID=gene-AB69_RS07640;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AB69_RS07640;old_locus_tag=AB69_3154 NZ_JHDO01000100.1 Protein Homology CDS 48599 49309 . - 0 ID=cds-WP_000715214.1;Parent=gene-AB69_RS07640;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AB69_RS07640;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 49334 50230 . - . ID=gene-AB69_RS07635;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AB69_RS07635;old_locus_tag=AB69_3155 NZ_JHDO01000100.1 Protein Homology CDS 49334 50230 . - 0 ID=cds-WP_000806638.1;Parent=gene-AB69_RS07635;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AB69_RS07635;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 50342 50863 . + . ID=gene-AB69_RS07630;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AB69_RS07630;old_locus_tag=AB69_3156 NZ_JHDO01000100.1 Protein Homology CDS 50342 50863 . + 0 ID=cds-WP_001055874.1;Parent=gene-AB69_RS07630;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AB69_RS07630;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 50903 51310 . - . ID=gene-AB69_RS07625;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AB69_RS07625;old_locus_tag=AB69_3157 NZ_JHDO01000100.1 Protein Homology CDS 50903 51310 . - 0 ID=cds-WP_000244777.1;Parent=gene-AB69_RS07625;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AB69_RS07625;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 51291 51557 . - . ID=gene-AB69_RS07620;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AB69_RS07620;old_locus_tag=AB69_3158 NZ_JHDO01000100.1 Protein Homology CDS 51291 51557 . - 0 ID=cds-WP_000354046.1;Parent=gene-AB69_RS07620;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AB69_RS07620;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 51800 52780 . + . ID=gene-AB69_RS07615;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AB69_RS07615;old_locus_tag=AB69_3160 NZ_JHDO01000100.1 Protein Homology CDS 51800 52780 . + 0 ID=cds-WP_000886062.1;Parent=gene-AB69_RS07615;Dbxref=GenBank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AB69_RS07615;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 52976 53635 . - . ID=gene-AB69_RS07610;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AB69_RS07610;old_locus_tag=AB69_3161 NZ_JHDO01000100.1 Protein Homology CDS 52976 53635 . - 0 ID=cds-WP_000250274.1;Parent=gene-AB69_RS07610;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AB69_RS07610;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 53799 54110 . - . ID=gene-AB69_RS07605;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AB69_RS07605;old_locus_tag=AB69_3162 NZ_JHDO01000100.1 Protein Homology CDS 53799 54110 . - 0 ID=cds-WP_001182957.1;Parent=gene-AB69_RS07605;Dbxref=GenBank:WP_001182957.1;Name=WP_001182957.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AB69_RS07605;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182957.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 54155 55588 . + . ID=gene-AB69_RS07600;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AB69_RS07600;old_locus_tag=AB69_3163 NZ_JHDO01000100.1 Protein Homology CDS 54155 55588 . + 0 ID=cds-WP_001336277.1;Parent=gene-AB69_RS07600;Dbxref=GenBank:WP_001336277.1;Name=WP_001336277.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AB69_RS07600;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001336277.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 55645 56388 . - . ID=gene-AB69_RS07595;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AB69_RS07595;old_locus_tag=AB69_3164 NZ_JHDO01000100.1 Protein Homology CDS 55645 56388 . - 0 ID=cds-WP_000951964.1;Parent=gene-AB69_RS07595;Dbxref=GenBank:WP_000951964.1;Name=WP_000951964.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AB69_RS07595;product=SDR family oxidoreductase;protein_id=WP_000951964.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 56655 59528 . - . ID=gene-AB69_RS07590;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AB69_RS07590;old_locus_tag=AB69_3165 NZ_JHDO01000100.1 Protein Homology CDS 56655 59528 . - 0 ID=cds-WP_032231448.1;Parent=gene-AB69_RS07590;Dbxref=GenBank:WP_032231448.1;Name=WP_032231448.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417379.1;locus_tag=AB69_RS07590;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_032231448.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 59647 60036 . - . ID=gene-AB69_RS07585;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AB69_RS07585;old_locus_tag=AB69_3166 NZ_JHDO01000100.1 Protein Homology CDS 59647 60036 . - 0 ID=cds-WP_001295377.1;Parent=gene-AB69_RS07585;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AB69_RS07585;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 60060 61154 . - . ID=gene-AB69_RS07580;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AB69_RS07580;old_locus_tag=AB69_3167 NZ_JHDO01000100.1 Protein Homology CDS 60060 61154 . - 0 ID=cds-WP_000068701.1;Parent=gene-AB69_RS07580;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AB69_RS07580;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 61445 61528 . + . ID=gene-AB69_RS29875;Name=AB69_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29875;old_locus_tag=AB69_3168 NZ_JHDO01000100.1 Protein Homology CDS 61445 61528 . + 0 ID=cds-WP_120795391.1;Parent=gene-AB69_RS29875;Dbxref=GenBank:WP_120795391.1;Name=WP_120795391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AB69_RS29875;product=protein YqfI;protein_id=WP_120795391.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 61602 62804 . - . ID=gene-AB69_RS07575;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AB69_RS07575;old_locus_tag=AB69_3169 NZ_JHDO01000100.1 Protein Homology CDS 61602 62804 . - 0 ID=cds-WP_001192229.1;Parent=gene-AB69_RS07575;Dbxref=GenBank:WP_001192229.1;Name=WP_001192229.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417382.1;locus_tag=AB69_RS07575;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192229.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 62827 64005 . - . ID=gene-AB69_RS07570;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AB69_RS07570;old_locus_tag=AB69_3170 NZ_JHDO01000100.1 Protein Homology CDS 62827 64005 . - 0 ID=cds-WP_000111195.1;Parent=gene-AB69_RS07570;Dbxref=GenBank:WP_000111195.1;Name=WP_000111195.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AB69_RS07570;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111195.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 64002 65327 . - . ID=gene-AB69_RS07565;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AB69_RS07565;old_locus_tag=AB69_3171 NZ_JHDO01000100.1 Protein Homology CDS 64002 65327 . - 0 ID=cds-WP_001290136.1;Parent=gene-AB69_RS07565;Dbxref=GenBank:WP_001290136.1;Name=WP_001290136.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417384.1;locus_tag=AB69_RS07565;product=Xaa-Pro aminopeptidase;protein_id=WP_001290136.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 65353 65931 . - . ID=gene-AB69_RS07560;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AB69_RS07560;old_locus_tag=AB69_3172 NZ_JHDO01000100.1 Protein Homology CDS 65353 65931 . - 0 ID=cds-WP_001295378.1;Parent=gene-AB69_RS07560;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AB69_RS07560;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 66099 66428 . + . ID=gene-AB69_RS07555;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AB69_RS07555;old_locus_tag=AB69_3173 NZ_JHDO01000100.1 Protein Homology CDS 66099 66428 . + 0 ID=cds-WP_001276008.1;Parent=gene-AB69_RS07555;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AB69_RS07555;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 66470 66653 . + . ID=gene-AB69_RS25790;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AB69_RS25790 NZ_JHDO01000100.1 cmsearch ncRNA 66470 66653 . + . ID=rna-AB69_RS25790;Parent=gene-AB69_RS25790;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25790;product=6S RNA NZ_JHDO01000100.1 cmsearch exon 66470 66653 . + . ID=exon-AB69_RS25790-1;Parent=rna-AB69_RS25790;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25790;product=6S RNA NZ_JHDO01000100.1 RefSeq gene 66674 67276 . + . ID=gene-AB69_RS07550;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AB69_RS07550;old_locus_tag=AB69_3174 NZ_JHDO01000100.1 Protein Homology CDS 66674 67276 . + 0 ID=cds-WP_000192748.1;Parent=gene-AB69_RS07550;Dbxref=GenBank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AB69_RS07550;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 67377 67436 . - . ID=gene-AB69_RS27500;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AB69_RS27500 NZ_JHDO01000100.1 Protein Homology CDS 67377 67436 . - 0 ID=cds-WP_010723220.1;Parent=gene-AB69_RS27500;Dbxref=GenBank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AB69_RS27500;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_010723220.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 67665 68897 . - . ID=gene-AB69_RS07545;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AB69_RS07545;old_locus_tag=AB69_3175 NZ_JHDO01000100.1 Protein Homology CDS 67665 68897 . - 0 ID=cds-WP_001151604.1;Parent=gene-AB69_RS07545;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AB69_RS07545;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 69153 69812 . - . ID=gene-AB69_RS07540;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AB69_RS07540;old_locus_tag=AB69_3177 NZ_JHDO01000100.1 Protein Homology CDS 69153 69812 . - 0 ID=cds-WP_000189743.1;Parent=gene-AB69_RS07540;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AB69_RS07540;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 69868 70098 . - . ID=gene-AB69_RS07535;Name=AB69_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07535;old_locus_tag=AB69_3178 NZ_JHDO01000100.1 Protein Homology CDS 69868 70098 . - 0 ID=cds-WP_000545308.1;Parent=gene-AB69_RS07535;Dbxref=GenBank:WP_000545308.1;Name=WP_000545308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AB69_RS07535;product=LysR substrate-binding domain-containing protein;protein_id=WP_000545308.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 70240 71133 . + . ID=gene-AB69_RS07530;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AB69_RS07530;old_locus_tag=AB69_3180 NZ_JHDO01000100.1 Protein Homology CDS 70240 71133 . + 0 ID=cds-WP_000828351.1;Parent=gene-AB69_RS07530;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AB69_RS07530;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 71337 73481 . + . ID=gene-AB69_RS07525;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AB69_RS07525;old_locus_tag=AB69_3182 NZ_JHDO01000100.1 Protein Homology CDS 71337 73481 . + 0 ID=cds-WP_032231449.1;Parent=gene-AB69_RS07525;Dbxref=GenBank:WP_032231449.1;Name=WP_032231449.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AB69_RS07525;product=methylmalonyl-CoA mutase;protein_id=WP_032231449.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 73474 74469 . + . ID=gene-AB69_RS07520;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AB69_RS07520;old_locus_tag=AB69_3183 NZ_JHDO01000100.1 Protein Homology CDS 73474 74469 . + 0 ID=cds-WP_000606525.1;Parent=gene-AB69_RS07520;Dbxref=GenBank:WP_000606525.1;Name=WP_000606525.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AB69_RS07520;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606525.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 74480 75265 . + . ID=gene-AB69_RS07515;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AB69_RS07515;old_locus_tag=AB69_3184 NZ_JHDO01000100.1 Protein Homology CDS 74480 75265 . + 0 ID=cds-WP_000122080.1;Parent=gene-AB69_RS07515;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AB69_RS07515;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 75289 76767 . + . ID=gene-AB69_RS07510;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AB69_RS07510;old_locus_tag=AB69_3185 NZ_JHDO01000100.1 Protein Homology CDS 75289 76767 . + 0 ID=cds-WP_000449965.1;Parent=gene-AB69_RS07510;Dbxref=GenBank:WP_000449965.1;Name=WP_000449965.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AB69_RS07510;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449965.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 76764 77660 . - . ID=gene-AB69_RS07505;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AB69_RS07505;old_locus_tag=AB69_3186 NZ_JHDO01000100.1 Protein Homology CDS 76764 77660 . - 0 ID=cds-WP_000350807.1;Parent=gene-AB69_RS07505;Dbxref=GenBank:WP_000350807.1;Name=WP_000350807.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AB69_RS07505;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350807.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 77827 78567 . - . ID=gene-AB69_RS07500;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AB69_RS07500;old_locus_tag=AB69_3187 NZ_JHDO01000100.1 Protein Homology CDS 77827 78567 . - 0 ID=cds-WP_000669834.1;Parent=gene-AB69_RS07500;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AB69_RS07500;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 78660 79295 . - . ID=gene-AB69_RS07495;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AB69_RS07495;old_locus_tag=AB69_3188 NZ_JHDO01000100.1 Protein Homology CDS 78660 79295 . - 0 ID=cds-WP_000493352.1;Parent=gene-AB69_RS07495;Dbxref=GenBank:WP_000493352.1;Name=WP_000493352.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AB69_RS07495;product=arginine exporter ArgO;protein_id=WP_000493352.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 79434 80294 . - . ID=gene-AB69_RS07490;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AB69_RS07490;old_locus_tag=AB69_3189 NZ_JHDO01000100.1 Protein Homology CDS 79434 80294 . - 0 ID=cds-WP_000389818.1;Parent=gene-AB69_RS07490;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AB69_RS07490;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 80652 81731 . - . ID=gene-AB69_RS07485;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AB69_RS07485;old_locus_tag=AB69_3190 NZ_JHDO01000100.1 Protein Homology CDS 80652 81731 . - 0 ID=cds-WP_000034372.1;Parent=gene-AB69_RS07485;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AB69_RS07485;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 81946 83109 . - . ID=gene-AB69_RS07480;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AB69_RS07480;old_locus_tag=AB69_3191 NZ_JHDO01000100.1 Protein Homology CDS 81946 83109 . - 0 ID=cds-WP_000111269.1;Parent=gene-AB69_RS07480;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AB69_RS07480;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 83159 84178 . - . ID=gene-AB69_RS07475;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AB69_RS07475;old_locus_tag=AB69_3192 NZ_JHDO01000100.1 Protein Homology CDS 83159 84178 . - 0 ID=cds-WP_000218480.1;Parent=gene-AB69_RS07475;Dbxref=GenBank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AB69_RS07475;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 84463 85176 . - . ID=gene-AB69_RS07470;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;locus_tag=AB69_RS07470;old_locus_tag=AB69_3193 NZ_JHDO01000100.1 Protein Homology CDS 84463 85176 . - 0 ID=cds-WP_000687705.1;Parent=gene-AB69_RS07470;Dbxref=GenBank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;gene=yggC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AB69_RS07470;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687705.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 85173 85682 . - . ID=gene-AB69_RS07465;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AB69_RS07465;old_locus_tag=AB69_3194 NZ_JHDO01000100.1 Protein Homology CDS 85173 85682 . - 0 ID=cds-WP_000224147.1;Parent=gene-AB69_RS07465;Dbxref=GenBank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AB69_RS07465;product=fumarase E;protein_id=WP_000224147.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 85704 86669 . - . ID=gene-AB69_RS07460;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB69_RS07460;old_locus_tag=AB69_3195 NZ_JHDO01000100.1 Protein Homology CDS 85704 86669 . - 0 ID=cds-WP_000987283.1;Parent=gene-AB69_RS07460;Dbxref=GenBank:WP_000987283.1;Name=WP_000987283.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AB69_RS07460;product=class II fructose-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 86666 87943 . - . ID=gene-AB69_RS07455;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AB69_RS07455;old_locus_tag=AB69_3196 NZ_JHDO01000100.1 Protein Homology CDS 86666 87943 . - 0 ID=cds-WP_000853247.1;Parent=gene-AB69_RS07455;Dbxref=GenBank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AB69_RS07455;product=zinc-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 87958 89346 . - . ID=gene-AB69_RS07450;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AB69_RS07450;old_locus_tag=AB69_3197 NZ_JHDO01000100.1 Protein Homology CDS 87958 89346 . - 0 ID=cds-WP_032231451.1;Parent=gene-AB69_RS07450;Dbxref=GenBank:WP_032231451.1;Name=WP_032231451.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AB69_RS07450;product=PTS mannitol transporter subunit IICB;protein_id=WP_032231451.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 89374 89817 . - . ID=gene-AB69_RS07445;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AB69_RS07445;old_locus_tag=AB69_3198 NZ_JHDO01000100.1 Protein Homology CDS 89374 89817 . - 0 ID=cds-WP_001239650.1;Parent=gene-AB69_RS07445;Dbxref=GenBank:WP_001239650.1;Name=WP_001239650.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AB69_RS07445;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239650.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 90131 92122 . - . ID=gene-AB69_RS07440;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB69_RS07440;old_locus_tag=AB69_3200 NZ_JHDO01000100.1 Protein Homology CDS 90131 92122 . - 0 ID=cds-WP_000098614.1;Parent=gene-AB69_RS07440;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AB69_RS07440;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 92400 93158 . + . ID=gene-AB69_RS07435;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AB69_RS07435;old_locus_tag=AB69_3201 NZ_JHDO01000100.1 Protein Homology CDS 92400 93158 . + 0 ID=cds-WP_001326497.1;Parent=gene-AB69_RS07435;Dbxref=GenBank:WP_001326497.1;Name=WP_001326497.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AB69_RS07435;product=metalloprotease LoiP;protein_id=WP_001326497.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 93364 94284 . - . ID=gene-AB69_RS07430;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AB69_RS07430;old_locus_tag=AB69_3202 NZ_JHDO01000100.1 Protein Homology CDS 93364 94284 . - 0 ID=cds-WP_000105566.1;Parent=gene-AB69_RS07430;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AB69_RS07430;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 94422 96398 . - . ID=gene-AB69_RS07425;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AB69_RS07425;old_locus_tag=AB69_3203 NZ_JHDO01000100.1 Protein Homology CDS 94422 96398 . - 0 ID=cds-WP_001300904.1;Parent=gene-AB69_RS07425;Dbxref=GenBank:WP_001300904.1;Name=WP_001300904.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AB69_RS07425;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 96407 96538 . - . ID=gene-AB69_RS07420;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AB69_RS07420;old_locus_tag=AB69_3204 NZ_JHDO01000100.1 Protein Homology CDS 96407 96538 . - 0 ID=cds-WP_001297406.1;Parent=gene-AB69_RS07420;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AB69_RS07420;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 96632 96775 . - . ID=gene-AB69_RS30625;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AB69_RS30625 NZ_JHDO01000100.1 Protein Homology CDS 96632 96775 . - 0 ID=cds-WP_001297404.1;Parent=gene-AB69_RS30625;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AB69_RS30625;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 96886 97137 . - . ID=gene-AB69_RS30630;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AB69_RS30630 NZ_JHDO01000100.1 Protein Homology CDS 96886 97137 . - 0 ID=cds-WP_001326496.1;Parent=gene-AB69_RS30630;Dbxref=GenBank:WP_001326496.1;Name=WP_001326496.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AB69_RS30630;product=protein YqgD;protein_id=WP_001326496.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 97193 98347 . + . ID=gene-AB69_RS07415;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AB69_RS07415;old_locus_tag=AB69_3206 NZ_JHDO01000100.1 Protein Homology CDS 97193 98347 . + 0 ID=cds-WP_001062128.1;Parent=gene-AB69_RS07415;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AB69_RS07415;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 98771 100165 . + . ID=gene-AB69_RS07410;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AB69_RS07410;old_locus_tag=AB69_3207 NZ_JHDO01000100.1 Protein Homology CDS 98771 100165 . + 0 ID=cds-WP_001112301.1;Parent=gene-AB69_RS07410;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AB69_RS07410;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 100242 100739 . + . ID=gene-AB69_RS07405;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AB69_RS07405;old_locus_tag=AB69_3208 NZ_JHDO01000100.1 Protein Homology CDS 100242 100739 . + 0 ID=cds-WP_001300769.1;Parent=gene-AB69_RS07405;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AB69_RS07405;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 100834 101541 . + . ID=gene-AB69_RS07400;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AB69_RS07400;old_locus_tag=AB69_3209 NZ_JHDO01000100.1 Protein Homology CDS 100834 101541 . + 0 ID=cds-WP_000286500.1;Parent=gene-AB69_RS07400;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AB69_RS07400;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 101621 102352 . + . ID=gene-AB69_RS07395;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AB69_RS07395;old_locus_tag=AB69_3210 NZ_JHDO01000100.1 Protein Homology CDS 101621 102352 . + 0 ID=cds-WP_001222509.1;Parent=gene-AB69_RS07395;Dbxref=GenBank:WP_001222509.1;Name=WP_001222509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AB69_RS07395;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222509.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 102365 103315 . + . ID=gene-AB69_RS07390;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AB69_RS07390;old_locus_tag=AB69_3211 NZ_JHDO01000100.1 Protein Homology CDS 102365 103315 . + 0 ID=cds-WP_000593273.1;Parent=gene-AB69_RS07390;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AB69_RS07390;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 103424 103987 . + . ID=gene-AB69_RS07385;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AB69_RS07385;old_locus_tag=AB69_3212 NZ_JHDO01000100.1 Protein Homology CDS 103424 103987 . + 0 ID=cds-WP_001053178.1;Parent=gene-AB69_RS07385;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AB69_RS07385;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 103987 104403 . + . ID=gene-AB69_RS07380;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AB69_RS07380;old_locus_tag=AB69_3213 NZ_JHDO01000100.1 Protein Homology CDS 103987 104403 . + 0 ID=cds-WP_000017106.1;Parent=gene-AB69_RS07380;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AB69_RS07380;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 104587 105561 . - . ID=gene-AB69_RS07375;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AB69_RS07375;old_locus_tag=AB69_3215 NZ_JHDO01000100.1 Protein Homology CDS 104587 105561 . - 0 ID=cds-WP_016242376.1;Parent=gene-AB69_RS07375;Dbxref=GenBank:WP_016242376.1;Name=WP_016242376.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242376.1;locus_tag=AB69_RS07375;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_016242376.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 105653 106228 . - . ID=gene-AB69_RS07370;Name=AB69_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07370;old_locus_tag=AB69_3216 NZ_JHDO01000100.1 Protein Homology CDS 105653 106228 . - 0 ID=cds-WP_032203429.1;Parent=gene-AB69_RS07370;Dbxref=GenBank:WP_032203429.1;Name=WP_032203429.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594467.1;locus_tag=AB69_RS07370;product=recombinase family protein;protein_id=WP_032203429.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 106843 109887 . + . ID=gene-AB69_RS07365;Name=AB69_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07365;old_locus_tag=AB69_3217 NZ_JHDO01000100.1 Protein Homology CDS 106843 109887 . + 0 ID=cds-WP_032203427.1;Parent=gene-AB69_RS07365;Dbxref=GenBank:WP_032203427.1;Name=WP_032203427.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803824.1;locus_tag=AB69_RS07365;product=metallophosphoesterase;protein_id=WP_032203427.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 109954 110307 . - . ID=gene-AB69_RS07360;Name=AB69_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07360;old_locus_tag=AB69_3218 NZ_JHDO01000100.1 Protein Homology CDS 109954 110307 . - 0 ID=cds-WP_032203426.1;Parent=gene-AB69_RS07360;Dbxref=GenBank:WP_032203426.1;Name=WP_032203426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579890.1;locus_tag=AB69_RS07360;product=hypothetical protein;protein_id=WP_032203426.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 110319 111143 . - . ID=gene-AB69_RS07355;Name=AB69_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07355;old_locus_tag=AB69_3219 NZ_JHDO01000100.1 Protein Homology CDS 110319 111143 . - 0 ID=cds-WP_050428914.1;Parent=gene-AB69_RS07355;Dbxref=GenBank:WP_050428914.1;Name=WP_050428914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803839.1;locus_tag=AB69_RS07355;product=hypothetical protein;protein_id=WP_050428914.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 111944 113383 . - . ID=gene-AB69_RS07350;Name=AB69_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07350;old_locus_tag=AB69_3220 NZ_JHDO01000100.1 Protein Homology CDS 111944 113383 . - 0 ID=cds-WP_032203425.1;Parent=gene-AB69_RS07350;Dbxref=GenBank:WP_032203425.1;Name=WP_032203425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625471.1;locus_tag=AB69_RS07350;product=type III restriction enzyme%2C res subunit;protein_id=WP_032203425.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 113486 115282 . - . ID=gene-AB69_RS07345;Name=AB69_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07345;old_locus_tag=AB69_3221 NZ_JHDO01000100.1 Protein Homology CDS 113486 115282 . - 0 ID=cds-WP_032203424.1;Parent=gene-AB69_RS07345;Dbxref=GenBank:WP_032203424.1;Name=WP_032203424.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242382.1;locus_tag=AB69_RS07345;product=recombinase family protein;protein_id=WP_032203424.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 115388 116092 . + . ID=gene-AB69_RS07340;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AB69_RS07340;old_locus_tag=AB69_3222 NZ_JHDO01000100.1 Protein Homology CDS 115388 116092 . + 0 ID=cds-WP_000997795.1;Parent=gene-AB69_RS07340;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AB69_RS07340;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 116110 116676 . + . ID=gene-AB69_RS07335;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AB69_RS07335;old_locus_tag=AB69_3223 NZ_JHDO01000100.1 Protein Homology CDS 116110 116676 . + 0 ID=cds-WP_001094831.1;Parent=gene-AB69_RS07335;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AB69_RS07335;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 116673 116963 . + . ID=gene-AB69_RS07330;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AB69_RS07330;old_locus_tag=AB69_3224 NZ_JHDO01000100.1 Protein Homology CDS 116673 116963 . + 0 ID=cds-WP_000994920.1;Parent=gene-AB69_RS07330;Dbxref=GenBank:WP_000994920.1;Name=WP_000994920.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AB69_RS07330;product=DUF167 family protein YggU;protein_id=WP_000994920.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 116971 117564 . + . ID=gene-AB69_RS07325;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AB69_RS07325;old_locus_tag=AB69_3225 NZ_JHDO01000100.1 Protein Homology CDS 116971 117564 . + 0 ID=cds-WP_001174777.1;Parent=gene-AB69_RS07325;Dbxref=GenBank:WP_001174777.1;Name=WP_001174777.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417429.1;locus_tag=AB69_RS07325;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_001174777.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 117557 118693 . + . ID=gene-AB69_RS07320;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AB69_RS07320;old_locus_tag=AB69_3226 NZ_JHDO01000100.1 Protein Homology CDS 117557 118693 . + 0 ID=cds-WP_000239943.1;Parent=gene-AB69_RS07320;Dbxref=GenBank:WP_000239943.1;Name=WP_000239943.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417430.1;locus_tag=AB69_RS07320;product=radical SAM family heme chaperone HemW;protein_id=WP_000239943.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 118848 119855 . - . ID=gene-AB69_RS07315;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AB69_RS07315;old_locus_tag=AB69_3227 NZ_JHDO01000100.1 Protein Homology CDS 118848 119855 . - 0 ID=cds-WP_000745210.1;Parent=gene-AB69_RS07315;Dbxref=GenBank:WP_000745210.1;Name=WP_000745210.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AB69_RS07315;product=DUF1202 family protein;protein_id=WP_000745210.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 119972 121018 . - . ID=gene-AB69_RS07310;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AB69_RS07310;old_locus_tag=AB69_3228 NZ_JHDO01000100.1 Protein Homology CDS 119972 121018 . - 0 ID=cds-WP_000394131.1;Parent=gene-AB69_RS07310;Dbxref=GenBank:WP_000394131.1;Name=WP_000394131.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417432.1;locus_tag=AB69_RS07310;product=L-asparaginase 2;protein_id=WP_000394131.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 121194 121913 . - . ID=gene-AB69_RS07305;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AB69_RS07305;old_locus_tag=AB69_3229 NZ_JHDO01000100.1 Protein Homology CDS 121194 121913 . - 0 ID=cds-WP_000984796.1;Parent=gene-AB69_RS07305;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AB69_RS07305;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 122097 122423 . - . ID=gene-AB69_RS07295;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AB69_RS07295;old_locus_tag=AB69_3231 NZ_JHDO01000100.1 Protein Homology CDS 122097 122423 . - 0 ID=cds-WP_001107564.1;Parent=gene-AB69_RS07295;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AB69_RS07295;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 122423 123142 . - . ID=gene-AB69_RS07290;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AB69_RS07290;old_locus_tag=AB69_3232 NZ_JHDO01000100.1 Protein Homology CDS 122423 123142 . - 0 ID=cds-WP_000786911.1;Parent=gene-AB69_RS07290;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AB69_RS07290;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 123303 124355 . + . ID=gene-AB69_RS07285;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AB69_RS07285;old_locus_tag=AB69_3233 NZ_JHDO01000100.1 Protein Homology CDS 123303 124355 . + 0 ID=cds-WP_001321419.1;Parent=gene-AB69_RS07285;Dbxref=GenBank:WP_001321419.1;Name=WP_001321419.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AB69_RS07285;product=A/G-specific adenine glycosylase;protein_id=WP_001321419.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 124383 124658 . + . ID=gene-AB69_RS07280;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AB69_RS07280;old_locus_tag=AB69_3234 NZ_JHDO01000100.1 Protein Homology CDS 124383 124658 . + 0 ID=cds-WP_000091700.1;Parent=gene-AB69_RS07280;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AB69_RS07280;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 124723 125802 . + . ID=gene-AB69_RS07275;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AB69_RS07275;old_locus_tag=AB69_3235 NZ_JHDO01000100.1 Protein Homology CDS 124723 125802 . + 0 ID=cds-WP_000760323.1;Parent=gene-AB69_RS07275;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AB69_RS07275;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 126004 127260 . + . ID=gene-AB69_RS07270;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AB69_RS07270;old_locus_tag=AB69_3237 NZ_JHDO01000100.1 Protein Homology CDS 126004 127260 . + 0 ID=cds-WP_001049791.1;Parent=gene-AB69_RS07270;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AB69_RS07270;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 127310 129445 . - . ID=gene-AB69_RS07265;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AB69_RS07265;old_locus_tag=AB69_3238 NZ_JHDO01000100.1 Protein Homology CDS 127310 129445 . - 0 ID=cds-WP_001326492.1;Parent=gene-AB69_RS07265;Dbxref=GenBank:WP_001326492.1;Name=WP_001326492.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AB69_RS07265;product=ornithine decarboxylase;protein_id=WP_001326492.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 129607 129690 . - . ID=gene-AB69_RS30420;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AB69_RS30420 NZ_JHDO01000100.1 Protein Homology CDS 129607 129690 . - 0 ID=cds-WP_211180506.1;Parent=gene-AB69_RS30420;Dbxref=GenBank:WP_211180506.1;Name=WP_211180506.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AB69_RS30420;product=protein YqgH;protein_id=WP_211180506.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 129843 130550 . + . ID=gene-AB69_RS07260;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AB69_RS07260;old_locus_tag=AB69_3239 NZ_JHDO01000100.1 Protein Homology CDS 129843 130550 . + 0 ID=cds-WP_000234514.1;Parent=gene-AB69_RS07260;Dbxref=GenBank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AB69_RS07260;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 130656 130731 . + . ID=gene-AB69_RS07255;Name=AB69_RS07255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS07255;old_locus_tag=AB69_3240 NZ_JHDO01000100.1 tRNAscan-SE tRNA 130656 130731 . + . ID=rna-AB69_RS07255;Parent=gene-AB69_RS07255;anticodon=(pos:130689..130691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS07255;product=tRNA-Phe NZ_JHDO01000100.1 tRNAscan-SE exon 130656 130731 . + . ID=exon-AB69_RS07255-1;Parent=rna-AB69_RS07255;anticodon=(pos:130689..130691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS07255;product=tRNA-Phe NZ_JHDO01000100.1 RefSeq gene 130880 131416 . - . ID=gene-AB69_RS07250;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;locus_tag=AB69_RS07250;old_locus_tag=AB69_3241 NZ_JHDO01000100.1 Protein Homology CDS 130880 131416 . - 0 ID=cds-WP_000942785.1;Parent=gene-AB69_RS07250;Dbxref=GenBank:WP_000942785.1;Name=WP_000942785.1;gbkey=CDS;gene=yghD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417442.1;locus_tag=AB69_RS07250;product=GspM family type II secretion system protein YghD;protein_id=WP_000942785.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 131418 132596 . - . ID=gene-AB69_RS07245;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AB69_RS07245;old_locus_tag=AB69_3242 NZ_JHDO01000100.1 Protein Homology CDS 131418 132596 . - 0 ID=cds-WP_032200598.1;Parent=gene-AB69_RS07245;Dbxref=GenBank:WP_032200598.1;Name=WP_032200598.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097227.1;locus_tag=AB69_RS07245;product=type II secretion system protein GspL;protein_id=WP_032200598.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 132593 133570 . - . ID=gene-AB69_RS07240;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AB69_RS07240;old_locus_tag=AB69_3243 NZ_JHDO01000100.1 Protein Homology CDS 132593 133570 . - 0 ID=cds-WP_000633209.1;Parent=gene-AB69_RS07240;Dbxref=GenBank:WP_000633209.1;Name=WP_000633209.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554494.1;locus_tag=AB69_RS07240;product=type II secretion system minor pseudopilin GspK;protein_id=WP_000633209.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 133573 134172 . - . ID=gene-AB69_RS07235;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AB69_RS07235;old_locus_tag=AB69_3244 NZ_JHDO01000100.1 Protein Homology CDS 133573 134172 . - 0 ID=cds-WP_001255034.1;Parent=gene-AB69_RS07235;Dbxref=GenBank:WP_001255034.1;Name=WP_001255034.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691118.1;locus_tag=AB69_RS07235;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_001255034.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 134169 134540 . - . ID=gene-AB69_RS07230;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AB69_RS07230;old_locus_tag=AB69_3245 NZ_JHDO01000100.1 Protein Homology CDS 134169 134540 . - 0 ID=cds-WP_000820113.1;Parent=gene-AB69_RS07230;Dbxref=GenBank:WP_000820113.1;Name=WP_000820113.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709020.1;locus_tag=AB69_RS07230;product=type II secretion system minor pseudopilin GspI;protein_id=WP_000820113.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 134537 135100 . - . ID=gene-AB69_RS07225;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AB69_RS07225;old_locus_tag=AB69_3246 NZ_JHDO01000100.1 Protein Homology CDS 134537 135100 . - 0 ID=cds-WP_001115154.1;Parent=gene-AB69_RS07225;Dbxref=GenBank:WP_001115154.1;Name=WP_001115154.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394829.1;locus_tag=AB69_RS07225;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001115154.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 135104 135559 . - . ID=gene-AB69_RS07220;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AB69_RS07220;old_locus_tag=AB69_3247 NZ_JHDO01000100.1 Protein Homology CDS 135104 135559 . - 0 ID=cds-WP_001087289.1;Parent=gene-AB69_RS07220;Dbxref=GenBank:WP_001087289.1;Name=WP_001087289.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912123.1;locus_tag=AB69_RS07220;product=type II secretion system major pseudopilin GspG;protein_id=WP_001087289.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 135576 136799 . - . ID=gene-AB69_RS07215;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AB69_RS07215;old_locus_tag=AB69_3248 NZ_JHDO01000100.1 Protein Homology CDS 135576 136799 . - 0 ID=cds-WP_001173458.1;Parent=gene-AB69_RS07215;Dbxref=GenBank:WP_001173458.1;Name=WP_001173458.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173399.1;locus_tag=AB69_RS07215;product=type II secretion system inner membrane protein GspF;protein_id=WP_001173458.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 136799 138292 . - . ID=gene-AB69_RS07210;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB69_RS07210;old_locus_tag=AB69_3249 NZ_JHDO01000100.1 Protein Homology CDS 136799 138292 . - 0 ID=cds-WP_000249382.1;Parent=gene-AB69_RS07210;Dbxref=GenBank:WP_000249382.1;Name=WP_000249382.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1;locus_tag=AB69_RS07210;product=type II secretion system ATPase GspE;protein_id=WP_000249382.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 138292 140352 . - . ID=gene-AB69_RS07205;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AB69_RS07205;old_locus_tag=AB69_3250 NZ_JHDO01000100.1 Protein Homology CDS 138292 140352 . - 0 ID=cds-WP_000498829.1;Parent=gene-AB69_RS07205;Dbxref=GenBank:WP_000498829.1;Name=WP_000498829.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234996.1;locus_tag=AB69_RS07205;product=type II secretion system secretin GspD;protein_id=WP_000498829.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 140382 141341 . - . ID=gene-AB69_RS07200;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AB69_RS07200;old_locus_tag=AB69_3251 NZ_JHDO01000100.1 Protein Homology CDS 140382 141341 . - 0 ID=cds-WP_000135076.1;Parent=gene-AB69_RS07200;Dbxref=GenBank:WP_000135076.1;Name=WP_000135076.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239656.1;locus_tag=AB69_RS07200;product=type II secretion system protein GspC;protein_id=WP_000135076.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 141359 141769 . - . ID=gene-AB69_RS07195;Name=gspS2;gbkey=Gene;gene=gspS2;gene_biotype=protein_coding;locus_tag=AB69_RS07195;old_locus_tag=AB69_3252 NZ_JHDO01000100.1 Protein Homology CDS 141359 141769 . - 0 ID=cds-WP_001324279.1;Parent=gene-AB69_RS07195;Dbxref=GenBank:WP_001324279.1;Name=WP_001324279.1;gbkey=CDS;gene=gspS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417445.1;locus_tag=AB69_RS07195;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_001324279.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 141835 142644 . - . ID=gene-AB69_RS07190;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;locus_tag=AB69_RS07190;old_locus_tag=AB69_3253 NZ_JHDO01000100.1 Protein Homology CDS 141835 142644 . - 0 ID=cds-WP_032231454.1;Parent=gene-AB69_RS07190;Dbxref=GenBank:WP_032231454.1;Name=WP_032231454.1;gbkey=CDS;gene=pppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417446.4;locus_tag=AB69_RS07190;product=prepilin peptidase PppA;protein_id=WP_032231454.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 142842 147404 . - . ID=gene-AB69_RS07185;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;locus_tag=AB69_RS07185;old_locus_tag=AB69_3254 NZ_JHDO01000100.1 Protein Homology CDS 142842 147404 . - 0 ID=cds-WP_001034469.1;Parent=gene-AB69_RS07185;Dbxref=GenBank:WP_001034469.1;Name=WP_001034469.1;gbkey=CDS;gene=sslE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=AB69_RS07185;product=lipoprotein metalloprotease SslE;protein_id=WP_001034469.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 147889 149571 . - . ID=gene-AB69_RS07175;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AB69_RS07175;old_locus_tag=AB69_3257 NZ_JHDO01000100.1 Protein Homology CDS 147889 149571 . - 0 ID=cds-WP_000259302.1;Parent=gene-AB69_RS07175;Dbxref=GenBank:WP_000259302.1;Name=WP_000259302.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AB69_RS07175;product=glycolate permease GlcA;protein_id=WP_000259302.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 149926 152097 . - . ID=gene-AB69_RS07170;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AB69_RS07170;old_locus_tag=AB69_3258 NZ_JHDO01000100.1 Protein Homology CDS 149926 152097 . - 0 ID=cds-WP_000084131.1;Parent=gene-AB69_RS07170;Dbxref=GenBank:WP_000084131.1;Name=WP_000084131.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AB69_RS07170;product=malate synthase G;protein_id=WP_000084131.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 152119 152523 . - . ID=gene-AB69_RS07165;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AB69_RS07165;old_locus_tag=AB69_3259 NZ_JHDO01000100.1 Protein Homology CDS 152119 152523 . - 0 ID=cds-WP_000853256.1;Parent=gene-AB69_RS07165;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AB69_RS07165;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 152528 153751 . - . ID=gene-AB69_RS07160;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AB69_RS07160;old_locus_tag=AB69_3260 NZ_JHDO01000100.1 Protein Homology CDS 152528 153751 . - 0 ID=cds-WP_001194661.1;Parent=gene-AB69_RS07160;Dbxref=GenBank:WP_001194661.1;Name=WP_001194661.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AB69_RS07160;product=glycolate oxidase subunit GlcF;protein_id=WP_001194661.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 153762 154814 . - . ID=gene-AB69_RS07155;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AB69_RS07155;old_locus_tag=AB69_3261 NZ_JHDO01000100.1 Protein Homology CDS 153762 154814 . - 0 ID=cds-WP_000943100.1;Parent=gene-AB69_RS07155;Dbxref=GenBank:WP_000943100.1;Name=WP_000943100.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026191.1;locus_tag=AB69_RS07155;product=glycolate oxidase subunit GlcE;protein_id=WP_000943100.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 154814 156313 . - . ID=gene-AB69_RS07150;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AB69_RS07150;old_locus_tag=AB69_3262 NZ_JHDO01000100.1 Protein Homology CDS 154814 156313 . - 0 ID=cds-WP_000026117.1;Parent=gene-AB69_RS07150;Dbxref=GenBank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AB69_RS07150;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 156564 157328 . + . ID=gene-AB69_RS07145;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AB69_RS07145;old_locus_tag=AB69_3263 NZ_JHDO01000100.1 Protein Homology CDS 156564 157328 . + 0 ID=cds-WP_001297764.1;Parent=gene-AB69_RS07145;Dbxref=GenBank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AB69_RS07145;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 157335 158477 . - . ID=gene-AB69_RS07140;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AB69_RS07140;old_locus_tag=AB69_3264 NZ_JHDO01000100.1 Protein Homology CDS 157335 158477 . - 0 ID=cds-WP_001300526.1;Parent=gene-AB69_RS07140;Dbxref=GenBank:WP_001300526.1;Name=WP_001300526.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=AB69_RS07140;product=protein YghO;protein_id=WP_001300526.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 158887 160575 . + . ID=gene-AB69_RS07135;Name=AB69_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07135;old_locus_tag=AB69_3265 NZ_JHDO01000100.1 Protein Homology CDS 158887 160575 . + 0 ID=cds-WP_001326490.1;Parent=gene-AB69_RS07135;Dbxref=GenBank:WP_001326490.1;Name=WP_001326490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383581.1;locus_tag=AB69_RS07135;product=fatty acyl-AMP ligase;protein_id=WP_001326490.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 160572 161486 . + . ID=gene-AB69_RS07130;Name=AB69_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07130;old_locus_tag=AB69_3266 NZ_JHDO01000100.1 Protein Homology CDS 160572 161486 . + 0 ID=cds-WP_001077166.1;Parent=gene-AB69_RS07130;Dbxref=GenBank:WP_001077166.1;Name=WP_001077166.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AB69_RS07130;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001077166.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 161518 161766 . + . ID=gene-AB69_RS07125;Name=AB69_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07125;old_locus_tag=AB69_3267 NZ_JHDO01000100.1 Protein Homology CDS 161518 161766 . + 0 ID=cds-WP_000248097.1;Parent=gene-AB69_RS07125;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AB69_RS07125;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 161766 162938 . + . ID=gene-AB69_RS07120;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=AB69_RS07120;old_locus_tag=AB69_3268 NZ_JHDO01000100.1 Protein Homology CDS 161766 162938 . + 0 ID=cds-WP_000524970.1;Parent=gene-AB69_RS07120;Dbxref=GenBank:WP_000524970.1;Name=WP_000524970.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AB69_RS07120;product=serine palmitoyltransferase;protein_id=WP_000524970.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 162973 164052 . - . ID=gene-AB69_RS07115;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB69_RS07115;old_locus_tag=AB69_3269 NZ_JHDO01000100.1 Protein Homology CDS 162973 164052 . - 0 ID=cds-WP_001318997.1;Parent=gene-AB69_RS07115;Dbxref=GenBank:WP_001318997.1;Name=WP_001318997.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AB69_RS07115;product=LPS export ABC transporter permease LptG;protein_id=WP_001318997.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 164049 165119 . - . ID=gene-AB69_RS07110;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB69_RS07110;old_locus_tag=AB69_3270 NZ_JHDO01000100.1 Protein Homology CDS 164049 165119 . - 0 ID=cds-WP_000779636.1;Parent=gene-AB69_RS07110;Dbxref=GenBank:WP_000779636.1;Name=WP_000779636.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AB69_RS07110;product=LPS export ABC transporter permease LptF;protein_id=WP_000779636.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 165150 165710 . - . ID=gene-AB69_RS07105;Name=AB69_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07105;old_locus_tag=AB69_3271 NZ_JHDO01000100.1 Protein Homology CDS 165150 165710 . - 0 ID=cds-WP_001298770.1;Parent=gene-AB69_RS07105;Dbxref=GenBank:WP_001298770.1;Name=WP_001298770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AB69_RS07105;product=YtfJ family protein;protein_id=WP_001298770.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 165722 166546 . - . ID=gene-AB69_RS07100;Name=AB69_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07100;old_locus_tag=AB69_3272 NZ_JHDO01000100.1 Protein Homology CDS 165722 166546 . - 0 ID=cds-WP_000984978.1;Parent=gene-AB69_RS07100;Dbxref=GenBank:WP_000984978.1;Name=WP_000984978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AB69_RS07100;product=hypothetical protein;protein_id=WP_000984978.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 166546 167895 . - . ID=gene-AB69_RS07095;Name=AB69_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07095;old_locus_tag=AB69_3273 NZ_JHDO01000100.1 Protein Homology CDS 166546 167895 . - 0 ID=cds-WP_000896896.1;Parent=gene-AB69_RS07095;Dbxref=GenBank:WP_000896896.1;Name=WP_000896896.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AB69_RS07095;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000896896.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 167941 168699 . - . ID=gene-AB69_RS07090;Name=AB69_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS07090;old_locus_tag=AB69_3274 NZ_JHDO01000100.1 Protein Homology CDS 167941 168699 . - 0 ID=cds-WP_000339531.1;Parent=gene-AB69_RS07090;Dbxref=GenBank:WP_000339531.1;Name=WP_000339531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AB69_RS07090;product=ATP-binding protein;protein_id=WP_000339531.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 168731 169444 . - . ID=gene-AB69_RS07085;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=AB69_RS07085;old_locus_tag=AB69_3275 NZ_JHDO01000100.1 Protein Homology CDS 168731 169444 . - 0 ID=cds-WP_001076243.1;Parent=gene-AB69_RS07085;Dbxref=GenBank:WP_001076243.1;Name=WP_001076243.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AB69_RS07085;product=dTMP kinase;protein_id=WP_001076243.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 169618 170310 . + . ID=gene-AB69_RS07080;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=AB69_RS07080;old_locus_tag=AB69_3276 NZ_JHDO01000100.1 Protein Homology CDS 169618 170310 . + 0 ID=cds-WP_001190781.1;Parent=gene-AB69_RS07080;Dbxref=GenBank:WP_001190781.1;Name=WP_001190781.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghT;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AB69_RS07080;product=dTMP kinase;protein_id=WP_001190781.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 170359 171858 . - . ID=gene-AB69_RS07075;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AB69_RS07075;old_locus_tag=AB69_3277 NZ_JHDO01000100.1 Protein Homology CDS 170359 171858 . - 0 ID=cds-WP_000933250.1;Parent=gene-AB69_RS07075;Dbxref=GenBank:WP_000933250.1;Name=WP_000933250.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AB69_RS07075;product=inorganic phosphate transporter PitB;protein_id=WP_000933250.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 172150 174009 . - . ID=gene-AB69_RS07070;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AB69_RS07070;old_locus_tag=AB69_3279 NZ_JHDO01000100.1 Protein Homology CDS 172150 174009 . - 0 ID=cds-WP_001297309.1;Parent=gene-AB69_RS07070;Dbxref=GenBank:WP_001297309.1;Name=WP_001297309.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AB69_RS07070;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001297309.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 174214 175080 . + . ID=gene-AB69_RS07065;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AB69_RS07065;old_locus_tag=AB69_3280 NZ_JHDO01000100.1 Protein Homology CDS 174214 175080 . + 0 ID=cds-WP_001295515.1;Parent=gene-AB69_RS07065;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AB69_RS07065;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 175203 175451 . - . ID=gene-AB69_RS07060;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AB69_RS07060;old_locus_tag=AB69_3281 NZ_JHDO01000100.1 Protein Homology CDS 175203 175451 . - 0 ID=cds-WP_000334896.1;Parent=gene-AB69_RS07060;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AB69_RS07060;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 175464 175805 . - . ID=gene-AB69_RS07055;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB69_RS07055;old_locus_tag=AB69_3282 NZ_JHDO01000100.1 Protein Homology CDS 175464 175805 . - 0 ID=cds-WP_000544953.1;Parent=gene-AB69_RS07055;Dbxref=GenBank:WP_000544953.1;Name=WP_000544953.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AB69_RS07055;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 175798 176286 . - . ID=gene-AB69_RS07050;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AB69_RS07050;old_locus_tag=AB69_3283 NZ_JHDO01000100.1 Protein Homology CDS 175798 176286 . - 0 ID=cds-WP_032231455.1;Parent=gene-AB69_RS07050;Dbxref=GenBank:WP_032231455.1;Name=WP_032231455.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AB69_RS07050;product=hydrogenase-2 assembly chaperone;protein_id=WP_032231455.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 176279 176773 . - . ID=gene-AB69_RS07045;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AB69_RS07045;old_locus_tag=AB69_3284 NZ_JHDO01000100.1 Protein Homology CDS 176279 176773 . - 0 ID=cds-WP_001221939.1;Parent=gene-AB69_RS07045;Dbxref=GenBank:WP_001221939.1;Name=WP_001221939.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417467.1;locus_tag=AB69_RS07045;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221939.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 176773 178476 . - . ID=gene-AB69_RS07040;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AB69_RS07040;old_locus_tag=AB69_3285 NZ_JHDO01000100.1 Protein Homology CDS 176773 178476 . - 0 ID=cds-WP_000083065.1;Parent=gene-AB69_RS07040;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AB69_RS07040;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 178473 179651 . - . ID=gene-AB69_RS07035;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AB69_RS07035;old_locus_tag=AB69_3286 NZ_JHDO01000100.1 Protein Homology CDS 178473 179651 . - 0 ID=cds-WP_000017703.1;Parent=gene-AB69_RS07035;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AB69_RS07035;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 179641 180627 . - . ID=gene-AB69_RS07030;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AB69_RS07030;old_locus_tag=AB69_3287 NZ_JHDO01000100.1 Protein Homology CDS 179641 180627 . - 0 ID=cds-WP_001081870.1;Parent=gene-AB69_RS07030;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AB69_RS07030;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 180630 181748 . - . ID=gene-AB69_RS07025;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AB69_RS07025;old_locus_tag=AB69_3288 NZ_JHDO01000100.1 Protein Homology CDS 180630 181748 . - 0 ID=cds-WP_000145410.1;Parent=gene-AB69_RS07025;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AB69_RS07025;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 181937 182224 . - . ID=gene-AB69_RS07020;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AB69_RS07020;old_locus_tag=AB69_3289 NZ_JHDO01000100.1 Protein Homology CDS 181937 182224 . - 0 ID=cds-WP_001059136.1;Parent=gene-AB69_RS07020;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AB69_RS07020;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 182343 183227 . - . ID=gene-AB69_RS0124975;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=pseudogene;locus_tag=AB69_RS0124975;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 182343 183227 . - 0 ID=cds-AB69_RS0124975;Parent=gene-AB69_RS0124975;Note=frameshifted;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AB69_RS0124975;product=YghX family hydrolase;pseudo=true;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 183384 184424 . + . ID=gene-AB69_RS07015;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AB69_RS07015;old_locus_tag=AB69_3293 NZ_JHDO01000100.1 Protein Homology CDS 183384 184424 . + 0 ID=cds-WP_000262172.1;Parent=gene-AB69_RS07015;Dbxref=GenBank:WP_000262172.1;Name=WP_000262172.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417474.1;locus_tag=AB69_RS07015;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262172.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 184464 184958 . - . ID=gene-AB69_RS07010;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AB69_RS07010;old_locus_tag=AB69_3294 NZ_JHDO01000100.1 Protein Homology CDS 184464 184958 . - 0 ID=cds-WP_000439331.1;Parent=gene-AB69_RS07010;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AB69_RS07010;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 185149 186033 . + . ID=gene-AB69_RS07005;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AB69_RS07005;old_locus_tag=AB69_3295 NZ_JHDO01000100.1 Protein Homology CDS 185149 186033 . + 0 ID=cds-WP_000018760.1;Parent=gene-AB69_RS07005;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AB69_RS07005;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 186192 186617 . - . ID=gene-AB69_RS07000;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AB69_RS07000;old_locus_tag=AB69_3296 NZ_JHDO01000100.1 Protein Homology CDS 186192 186617 . - 0 ID=cds-WP_001240712.1;Parent=gene-AB69_RS07000;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AB69_RS07000;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 186624 187358 . - . ID=gene-AB69_RS06995;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AB69_RS06995;old_locus_tag=AB69_3297 NZ_JHDO01000100.1 Protein Homology CDS 186624 187358 . - 0 ID=cds-WP_000527844.1;Parent=gene-AB69_RS06995;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AB69_RS06995;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 187610 188797 . + . ID=gene-AB69_RS06990;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AB69_RS06990;old_locus_tag=AB69_3298 NZ_JHDO01000100.1 Protein Homology CDS 187610 188797 . + 0 ID=cds-WP_001301079.1;Parent=gene-AB69_RS06990;Dbxref=GenBank:WP_001301079.1;Name=WP_001301079.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417481.1;locus_tag=AB69_RS06990;product=cystathionine beta-lyase;protein_id=WP_001301079.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 188937 189596 . + . ID=gene-AB69_RS06985;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AB69_RS06985;old_locus_tag=AB69_3299 NZ_JHDO01000100.1 Protein Homology CDS 188937 189596 . + 0 ID=cds-WP_000268419.1;Parent=gene-AB69_RS06985;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AB69_RS06985;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 189636 190535 . - . ID=gene-AB69_RS06980;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AB69_RS06980;old_locus_tag=AB69_3300 NZ_JHDO01000100.1 Protein Homology CDS 189636 190535 . - 0 ID=cds-WP_032231456.1;Parent=gene-AB69_RS06980;Dbxref=GenBank:WP_032231456.1;Name=WP_032231456.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AB69_RS06980;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_032231456.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 190729 191892 . + . ID=gene-AB69_RS06970;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AB69_RS06970;old_locus_tag=AB69_3302 NZ_JHDO01000100.1 Protein Homology CDS 190729 191892 . + 0 ID=cds-WP_001058802.1;Parent=gene-AB69_RS06970;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AB69_RS06970;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 191997 192824 . + . ID=gene-AB69_RS06965;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AB69_RS06965;old_locus_tag=AB69_3303 NZ_JHDO01000100.1 Protein Homology CDS 191997 192824 . + 0 ID=cds-WP_000013149.1;Parent=gene-AB69_RS06965;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AB69_RS06965;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 193024 193950 . + . ID=gene-AB69_RS06960;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AB69_RS06960;old_locus_tag=AB69_3305 NZ_JHDO01000100.1 Protein Homology CDS 193024 193950 . + 0 ID=cds-WP_000691619.1;Parent=gene-AB69_RS06960;Dbxref=GenBank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AB69_RS06960;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 194001 194258 . + . ID=gene-AB69_RS06955;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AB69_RS06955;old_locus_tag=AB69_3306 NZ_JHDO01000100.1 Protein Homology CDS 194001 194258 . + 0 ID=cds-WP_000848528.1;Parent=gene-AB69_RS06955;Dbxref=GenBank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AB69_RS06955;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 194301 196520 . - . ID=gene-AB69_RS06950;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AB69_RS06950;old_locus_tag=AB69_3307 NZ_JHDO01000100.1 Protein Homology CDS 194301 196520 . - 0 ID=cds-WP_000095178.1;Parent=gene-AB69_RS06950;Dbxref=GenBank:WP_000095178.1;Name=WP_000095178.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311927.1;locus_tag=AB69_RS06950;product=YgiQ family radical SAM protein;protein_id=WP_000095178.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 196631 198043 . - . ID=gene-AB69_RS06945;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AB69_RS06945;old_locus_tag=AB69_3308 NZ_JHDO01000100.1 Protein Homology CDS 196631 198043 . - 0 ID=cds-WP_000059388.1;Parent=gene-AB69_RS06945;Dbxref=GenBank:WP_000059388.1;Name=WP_000059388.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AB69_RS06945;product=cell division protein FtsP;protein_id=WP_000059388.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 198118 198855 . - . ID=gene-AB69_RS06940;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AB69_RS06940;old_locus_tag=AB69_3309 NZ_JHDO01000100.1 Protein Homology CDS 198118 198855 . - 0 ID=cds-WP_000965722.1;Parent=gene-AB69_RS06940;Dbxref=GenBank:WP_000965722.1;Name=WP_000965722.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417490.1;locus_tag=AB69_RS06940;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 199089 201347 . - . ID=gene-AB69_RS06935;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AB69_RS06935;old_locus_tag=AB69_3310 NZ_JHDO01000100.1 Protein Homology CDS 199089 201347 . - 0 ID=cds-WP_001281881.1;Parent=gene-AB69_RS06935;Dbxref=GenBank:WP_001281881.1;Name=WP_001281881.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AB69_RS06935;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 201485 203092 . - . ID=gene-AB69_RS06930;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;locus_tag=AB69_RS06930;old_locus_tag=AB69_3311 NZ_JHDO01000100.1 Protein Homology CDS 201485 203092 . - 0 ID=cds-WP_001295629.1;Parent=gene-AB69_RS06930;Dbxref=GenBank:WP_001295629.1;Name=WP_001295629.1;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AB69_RS06930;product=ABC transporter substrate-binding protein;protein_id=WP_001295629.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 203225 203620 . - . ID=gene-AB69_RS06925;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AB69_RS06925;old_locus_tag=AB69_3312 NZ_JHDO01000100.1 Protein Homology CDS 203225 203620 . - 0 ID=cds-WP_000650107.1;Parent=gene-AB69_RS06925;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AB69_RS06925;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 203622 203918 . - . ID=gene-AB69_RS0124985;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AB69_RS0124985 NZ_JHDO01000100.1 Protein Homology CDS 203622 203918 . - 0 ID=cds-WP_000415584.1;Parent=gene-AB69_RS0124985;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AB69_RS0124985;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 204123 204605 . - . ID=gene-AB69_RS06920;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AB69_RS06920;old_locus_tag=AB69_3313 NZ_JHDO01000100.1 Protein Homology CDS 204123 204605 . - 0 ID=cds-WP_000183505.1;Parent=gene-AB69_RS06920;Dbxref=GenBank:WP_000183505.1;Name=WP_000183505.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026197.1;locus_tag=AB69_RS06920;product=AraC family transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 204658 205050 . - . ID=gene-AB69_RS06915;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AB69_RS06915;old_locus_tag=AB69_3314 NZ_JHDO01000100.1 Protein Homology CDS 204658 205050 . - 0 ID=cds-WP_000712658.1;Parent=gene-AB69_RS06915;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AB69_RS06915;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 205202 205861 . + . ID=gene-AB69_RS06910;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AB69_RS06910;old_locus_tag=AB69_3315 NZ_JHDO01000100.1 Protein Homology CDS 205202 205861 . + 0 ID=cds-WP_001221493.1;Parent=gene-AB69_RS06910;Dbxref=GenBank:WP_001221493.1;Name=WP_001221493.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AB69_RS06910;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221493.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 205858 207207 . + . ID=gene-AB69_RS06905;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AB69_RS06905;old_locus_tag=AB69_3316 NZ_JHDO01000100.1 Protein Homology CDS 205858 207207 . + 0 ID=cds-WP_032231458.1;Parent=gene-AB69_RS06905;Dbxref=GenBank:WP_032231458.1;Name=WP_032231458.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AB69_RS06905;product=quorum sensing histidine kinase QseC;protein_id=WP_032231458.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 207253 207585 . - . ID=gene-AB69_RS0124990;Name=ygiZ;gbkey=Gene;gene=ygiZ;gene_biotype=protein_coding;locus_tag=AB69_RS0124990 NZ_JHDO01000100.1 Protein Homology CDS 207253 207585 . - 0 ID=cds-WP_000917684.1;Parent=gene-AB69_RS0124990;Dbxref=GenBank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;gene=ygiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AB69_RS0124990;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 207904 208485 . + . ID=gene-AB69_RS06900;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AB69_RS06900;old_locus_tag=AB69_3317 NZ_JHDO01000100.1 Protein Homology CDS 207904 208485 . + 0 ID=cds-WP_000065430.1;Parent=gene-AB69_RS06900;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AB69_RS06900;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 208516 208830 . + . ID=gene-AB69_RS06895;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AB69_RS06895;old_locus_tag=AB69_3318 NZ_JHDO01000100.1 Protein Homology CDS 208516 208830 . + 0 ID=cds-WP_000958598.1;Parent=gene-AB69_RS06895;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AB69_RS06895;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 208878 210770 . - . ID=gene-AB69_RS06890;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AB69_RS06890;old_locus_tag=AB69_3319 NZ_JHDO01000100.1 Protein Homology CDS 208878 210770 . - 0 ID=cds-WP_000195296.1;Parent=gene-AB69_RS06890;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AB69_RS06890;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 210799 211380 . - . ID=gene-AB69_RS06885;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AB69_RS06885;old_locus_tag=AB69_3320 NZ_JHDO01000100.1 Protein Homology CDS 210799 211380 . - 0 ID=cds-WP_000105733.1;Parent=gene-AB69_RS06885;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AB69_RS06885;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 211380 212207 . - . ID=gene-AB69_RS06880;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AB69_RS06880;old_locus_tag=AB69_3321 NZ_JHDO01000100.1 Protein Homology CDS 211380 212207 . - 0 ID=cds-WP_000444747.1;Parent=gene-AB69_RS06880;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AB69_RS06880;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 212232 212654 . - . ID=gene-AB69_RS06875;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AB69_RS06875;old_locus_tag=AB69_3322 NZ_JHDO01000100.1 Protein Homology CDS 212232 212654 . - 0 ID=cds-WP_000833393.1;Parent=gene-AB69_RS06875;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AB69_RS06875;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 212655 213284 . - . ID=gene-AB69_RS06870;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AB69_RS06870;old_locus_tag=AB69_3323 NZ_JHDO01000100.1 Protein Homology CDS 212655 213284 . - 0 ID=cds-WP_000917117.1;Parent=gene-AB69_RS06870;Dbxref=GenBank:WP_000917117.1;Name=WP_000917117.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AB69_RS06870;product=ADP-ribose diphosphatase;protein_id=WP_000917117.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 213489 214970 . + . ID=gene-AB69_RS06865;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AB69_RS06865;old_locus_tag=AB69_3324 NZ_JHDO01000100.1 Protein Homology CDS 213489 214970 . + 0 ID=cds-WP_000735278.1;Parent=gene-AB69_RS06865;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AB69_RS06865;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 215118 215789 . + . ID=gene-AB69_RS06860;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AB69_RS06860;old_locus_tag=AB69_3325 NZ_JHDO01000100.1 Protein Homology CDS 215118 215789 . + 0 ID=cds-WP_000831543.1;Parent=gene-AB69_RS06860;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AB69_RS06860;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 215795 216955 . + . ID=gene-AB69_RS06855;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AB69_RS06855;old_locus_tag=AB69_3326 NZ_JHDO01000100.1 Protein Homology CDS 215795 216955 . + 0 ID=cds-WP_000442860.1;Parent=gene-AB69_RS06855;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AB69_RS06855;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 216993 217781 . - . ID=gene-AB69_RS06850;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AB69_RS06850;old_locus_tag=AB69_3327 NZ_JHDO01000100.1 Protein Homology CDS 216993 217781 . - 0 ID=cds-WP_001320780.1;Parent=gene-AB69_RS06850;Dbxref=GenBank:WP_001320780.1;Name=WP_001320780.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AB69_RS06850;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001320780.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 217924 218697 . + . ID=gene-AB69_RS06845;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AB69_RS06845;old_locus_tag=AB69_3328 NZ_JHDO01000100.1 Protein Homology CDS 217924 218697 . + 0 ID=cds-WP_001295627.1;Parent=gene-AB69_RS06845;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AB69_RS06845;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 218755 218925 . - . ID=gene-AB69_RS06840;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AB69_RS06840;old_locus_tag=AB69_3329 NZ_JHDO01000100.1 Protein Homology CDS 218755 218925 . - 0 ID=cds-WP_000469266.1;Parent=gene-AB69_RS06840;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AB69_RS06840;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 219187 219840 . - . ID=gene-AB69_RS06835;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AB69_RS06835;old_locus_tag=AB69_3330 NZ_JHDO01000100.1 Protein Homology CDS 219187 219840 . - 0 ID=cds-WP_001076997.1;Parent=gene-AB69_RS06835;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AB69_RS06835;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JHDO01000100.1 cmsearch riboswitch 219944 220092 . - . ID=id-NZ_JHDO01000100.1:219944..220092;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000100.1 RefSeq gene 220214 220504 . + . ID=gene-AB69_RS06830;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AB69_RS06830;old_locus_tag=AB69_3331 NZ_JHDO01000100.1 Protein Homology CDS 220214 220504 . + 0 ID=cds-WP_001295626.1;Parent=gene-AB69_RS06830;Dbxref=GenBank:WP_001295626.1;Name=WP_001295626.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AB69_RS06830;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001295626.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 220788 221339 . + . ID=gene-AB69_RS06825;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=AB69_RS06825;old_locus_tag=AB69_3332 NZ_JHDO01000100.1 Protein Homology CDS 220788 221339 . + 0 ID=cds-WP_001272145.1;Parent=gene-AB69_RS06825;Dbxref=GenBank:WP_001272145.1;Name=WP_001272145.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AB69_RS06825;product=fimbrial-like protein;protein_id=WP_001272145.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 221399 223903 . + . ID=gene-AB69_RS06820;Name=AB69_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS06820;old_locus_tag=AB69_3333 NZ_JHDO01000100.1 Protein Homology CDS 221399 223903 . + 0 ID=cds-WP_032231461.1;Parent=gene-AB69_RS06820;Dbxref=GenBank:WP_032231461.1;Name=WP_032231461.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AB69_RS06820;product=fimbria/pilus outer membrane usher protein;protein_id=WP_032231461.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 223919 224668 . + . ID=gene-AB69_RS06815;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AB69_RS06815;old_locus_tag=AB69_3334 NZ_JHDO01000100.1 Protein Homology CDS 223919 224668 . + 0 ID=cds-WP_001269824.1;Parent=gene-AB69_RS06815;Dbxref=GenBank:WP_001269824.1;Name=WP_001269824.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AB69_RS06815;product=fimbrial biogenesis chaperone;protein_id=WP_001269824.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 224670 225734 . + . ID=gene-AB69_RS06810;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=AB69_RS06810;old_locus_tag=AB69_3335 NZ_JHDO01000100.1 Protein Homology CDS 224670 225734 . + 0 ID=cds-WP_001269802.1;Parent=gene-AB69_RS06810;Dbxref=GenBank:WP_001269802.1;Name=WP_001269802.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AB69_RS06810;product=fimbrial protein;protein_id=WP_001269802.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 225777 225977 . - . ID=gene-AB69_RS06805;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AB69_RS06805;old_locus_tag=AB69_3336 NZ_JHDO01000100.1 Protein Homology CDS 225777 225977 . - 0 ID=cds-WP_000350095.1;Parent=gene-AB69_RS06805;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AB69_RS06805;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 226246 226875 . + . ID=gene-AB69_RS06800;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AB69_RS06800;old_locus_tag=AB69_3337 NZ_JHDO01000100.1 Protein Homology CDS 226246 226875 . + 0 ID=cds-WP_000599926.1;Parent=gene-AB69_RS06800;Dbxref=GenBank:WP_000599926.1;Name=WP_000599926.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AB69_RS06800;product=OB-fold-containig protein;protein_id=WP_000599926.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 226902 228563 . + . ID=gene-AB69_RS06795;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AB69_RS06795;old_locus_tag=AB69_3338 NZ_JHDO01000100.1 Protein Homology CDS 226902 228563 . + 0 ID=cds-WP_001311137.1;Parent=gene-AB69_RS06795;Dbxref=GenBank:WP_001311137.1;Name=WP_001311137.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AB69_RS06795;product=flotillin family protein;protein_id=WP_001311137.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 228804 228863 . + . ID=gene-AB69_RS29480;Name=AB69_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29480 NZ_JHDO01000100.1 Protein Homology CDS 228804 228863 . + 0 ID=cds-WP_001387081.1;Parent=gene-AB69_RS29480;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AB69_RS29480;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 229179 229238 . + . ID=gene-AB69_RS27550;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AB69_RS27550 NZ_JHDO01000100.1 Protein Homology CDS 229179 229238 . + 0 ID=cds-WP_010723221.1;Parent=gene-AB69_RS27550;Dbxref=GenBank:WP_010723221.1;Name=WP_010723221.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AB69_RS27550;product=type I toxin-antitoxin system toxin IbsE;protein_id=WP_010723221.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 229358 230791 . - . ID=gene-AB69_RS06790;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AB69_RS06790;old_locus_tag=AB69_3339 NZ_JHDO01000100.1 Protein Homology CDS 229358 230791 . - 0 ID=cds-WP_000869178.1;Parent=gene-AB69_RS06790;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AB69_RS06790;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 230839 233679 . - . ID=gene-AB69_RS06785;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AB69_RS06785;old_locus_tag=AB69_3340 NZ_JHDO01000100.1 Protein Homology CDS 230839 233679 . - 0 ID=cds-WP_001301081.1;Parent=gene-AB69_RS06785;Dbxref=GenBank:WP_001301081.1;Name=WP_001301081.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AB69_RS06785;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001301081.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 233702 235003 . - . ID=gene-AB69_RS06780;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AB69_RS06780;old_locus_tag=AB69_3341 NZ_JHDO01000100.1 Protein Homology CDS 233702 235003 . - 0 ID=cds-WP_000046281.1;Parent=gene-AB69_RS06780;Dbxref=GenBank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AB69_RS06780;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 235245 235865 . + . ID=gene-AB69_RS06770;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AB69_RS06770;old_locus_tag=AB69_3343 NZ_JHDO01000100.1 Protein Homology CDS 235245 235865 . + 0 ID=cds-WP_001125331.1;Parent=gene-AB69_RS06770;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AB69_RS06770;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 235929 237167 . + . ID=gene-AB69_RS06765;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AB69_RS06765;old_locus_tag=AB69_3344 NZ_JHDO01000100.1 Protein Homology CDS 235929 237167 . + 0 ID=cds-WP_000708487.1;Parent=gene-AB69_RS06765;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AB69_RS06765;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 237348 238169 . - . ID=gene-AB69_RS06760;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AB69_RS06760;old_locus_tag=AB69_3345 NZ_JHDO01000100.1 Protein Homology CDS 237348 238169 . - 0 ID=cds-WP_001281927.1;Parent=gene-AB69_RS06760;Dbxref=GenBank:WP_001281927.1;Name=WP_001281927.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AB69_RS06760;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281927.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 238259 238627 . - . ID=gene-AB69_RS06755;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AB69_RS06755;old_locus_tag=AB69_3346 NZ_JHDO01000100.1 Protein Homology CDS 238259 238627 . - 0 ID=cds-WP_001295541.1;Parent=gene-AB69_RS06755;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AB69_RS06755;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 238732 239349 . + . ID=gene-AB69_RS06750;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AB69_RS06750;old_locus_tag=AB69_3347 NZ_JHDO01000100.1 Protein Homology CDS 238732 239349 . + 0 ID=cds-WP_001272796.1;Parent=gene-AB69_RS06750;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AB69_RS06750;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 239362 240294 . - . ID=gene-AB69_RS06745;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AB69_RS06745;old_locus_tag=AB69_3348 NZ_JHDO01000100.1 Protein Homology CDS 239362 240294 . - 0 ID=cds-WP_000935206.1;Parent=gene-AB69_RS06745;Dbxref=GenBank:WP_000935206.1;Name=WP_000935206.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AB69_RS06745;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 240501 241412 . + . ID=gene-AB69_RS06740;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AB69_RS06740;old_locus_tag=AB69_3349 NZ_JHDO01000100.1 Protein Homology CDS 240501 241412 . + 0 ID=cds-WP_000986797.1;Parent=gene-AB69_RS06740;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AB69_RS06740;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 241409 242014 . + . ID=gene-AB69_RS06735;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AB69_RS06735;old_locus_tag=AB69_3350 NZ_JHDO01000100.1 Protein Homology CDS 241409 242014 . + 0 ID=cds-WP_000722957.1;Parent=gene-AB69_RS06735;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AB69_RS06735;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 242062 243525 . + . ID=gene-AB69_RS06730;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AB69_RS06730;old_locus_tag=AB69_3351 NZ_JHDO01000100.1 Protein Homology CDS 242062 243525 . + 0 ID=cds-WP_032231464.1;Parent=gene-AB69_RS06730;Dbxref=GenBank:WP_032231464.1;Name=WP_032231464.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AB69_RS06730;product=L-tartrate/succinate antiporter;protein_id=WP_032231464.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 243568 244581 . - . ID=gene-AB69_RS06725;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AB69_RS06725;old_locus_tag=AB69_3352 NZ_JHDO01000100.1 Protein Homology CDS 243568 244581 . - 0 ID=cds-WP_001264352.1;Parent=gene-AB69_RS06725;Dbxref=GenBank:WP_001264352.1;Name=WP_001264352.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AB69_RS06725;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264352.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 244819 245034 . + . ID=gene-AB69_RS06720;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AB69_RS06720;old_locus_tag=AB69_3353 NZ_JHDO01000100.1 Protein Homology CDS 244819 245034 . + 0 ID=cds-WP_001144069.1;Parent=gene-AB69_RS06720;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AB69_RS06720;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 245145 246890 . + . ID=gene-AB69_RS06715;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AB69_RS06715;old_locus_tag=AB69_3354 NZ_JHDO01000100.1 Protein Homology CDS 245145 246890 . + 0 ID=cds-WP_000918827.1;Parent=gene-AB69_RS06715;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AB69_RS06715;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 247085 248926 . + . ID=gene-AB69_RS06710;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AB69_RS06710;old_locus_tag=AB69_3356 NZ_JHDO01000100.1 Protein Homology CDS 247085 248926 . + 0 ID=cds-WP_000437375.1;Parent=gene-AB69_RS06710;Dbxref=GenBank:WP_000437375.1;Name=WP_000437375.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AB69_RS06710;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 249005 249511 . - . ID=gene-AB69_RS06705;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AB69_RS06705;old_locus_tag=AB69_3357 NZ_JHDO01000100.1 Protein Homology CDS 249005 249511 . - 0 ID=cds-WP_000228937.1;Parent=gene-AB69_RS06705;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AB69_RS06705;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 249636 249711 . + . ID=gene-AB69_RS06700;Name=AB69_RS06700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS06700;old_locus_tag=AB69_3358 NZ_JHDO01000100.1 tRNAscan-SE tRNA 249636 249711 . + . ID=rna-AB69_RS06700;Parent=gene-AB69_RS06700;anticodon=(pos:249669..249671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06700;product=tRNA-Ile NZ_JHDO01000100.1 tRNAscan-SE exon 249636 249711 . + . ID=exon-AB69_RS06700-1;Parent=rna-AB69_RS06700;anticodon=(pos:249669..249671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06700;product=tRNA-Ile NZ_JHDO01000100.1 RefSeq gene 249765 250529 . - . ID=gene-AB69_RS06695;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AB69_RS06695;old_locus_tag=AB69_3359 NZ_JHDO01000100.1 Protein Homology CDS 249765 250529 . - 0 ID=cds-WP_001066494.1;Parent=gene-AB69_RS06695;Dbxref=GenBank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417541.1;locus_tag=AB69_RS06695;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001066494.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 250817 251440 . + . ID=gene-AB69_RS06690;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AB69_RS06690;old_locus_tag=AB69_3360 NZ_JHDO01000100.1 Protein Homology CDS 250817 251440 . + 0 ID=cds-WP_000018003.1;Parent=gene-AB69_RS06690;Dbxref=GenBank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AB69_RS06690;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 251594 253114 . - . ID=gene-AB69_RS06685;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AB69_RS06685;old_locus_tag=AB69_3361 NZ_JHDO01000100.1 Protein Homology CDS 251594 253114 . - 0 ID=cds-WP_000094721.1;Parent=gene-AB69_RS06685;Dbxref=GenBank:WP_000094721.1;Name=WP_000094721.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AB69_RS06685;product=aerotaxis sensor receptor Aer;protein_id=WP_000094721.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 253532 254911 . + . ID=gene-AB69_RS06680;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AB69_RS06680;old_locus_tag=AB69_3363 NZ_JHDO01000100.1 Protein Homology CDS 253532 254911 . + 0 ID=cds-WP_001301395.1;Parent=gene-AB69_RS06680;Dbxref=GenBank:WP_001301395.1;Name=WP_001301395.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AB69_RS06680;product=putrescine aminotransferase;protein_id=WP_001301395.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 254953 255285 . - . ID=gene-AB69_RS06675;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AB69_RS06675;old_locus_tag=AB69_3364 NZ_JHDO01000100.1 Protein Homology CDS 254953 255285 . - 0 ID=cds-WP_000450594.1;Parent=gene-AB69_RS06675;Dbxref=GenBank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=AB69_RS06675;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 255504 256487 . + . ID=gene-AB69_RS06670;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AB69_RS06670;old_locus_tag=AB69_3365 NZ_JHDO01000100.1 Protein Homology CDS 255504 256487 . + 0 ID=cds-WP_000212475.1;Parent=gene-AB69_RS06670;Dbxref=GenBank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AB69_RS06670;product=transcriptional regulator EbgR;protein_id=WP_000212475.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 256671 259763 . + . ID=gene-AB69_RS06665;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AB69_RS06665;old_locus_tag=AB69_3366 NZ_JHDO01000100.1 Protein Homology CDS 256671 259763 . + 0 ID=cds-WP_032231465.1;Parent=gene-AB69_RS06665;Dbxref=GenBank:WP_032231465.1;Name=WP_032231465.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=AB69_RS06665;product=beta-galactosidase subunit alpha;protein_id=WP_032231465.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 259760 260209 . + . ID=gene-AB69_RS06660;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AB69_RS06660;old_locus_tag=AB69_3367 NZ_JHDO01000100.1 Protein Homology CDS 259760 260209 . + 0 ID=cds-WP_001219954.1;Parent=gene-AB69_RS06660;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AB69_RS06660;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 260272 261705 . + . ID=gene-AB69_RS06655;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AB69_RS06655;old_locus_tag=AB69_3368 NZ_JHDO01000100.1 Protein Homology CDS 260272 261705 . + 0 ID=cds-WP_001285432.1;Parent=gene-AB69_RS06655;Dbxref=GenBank:WP_001285432.1;Name=WP_001285432.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026200.1;locus_tag=AB69_RS06655;product=amino acid permease;protein_id=WP_001285432.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 261839 262909 . + . ID=gene-AB69_RS06650;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AB69_RS06650;old_locus_tag=AB69_3369 NZ_JHDO01000100.1 Protein Homology CDS 261839 262909 . + 0 ID=cds-WP_000767652.1;Parent=gene-AB69_RS06650;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AB69_RS06650;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 262926 265277 . + . ID=gene-AB69_RS06645;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AB69_RS06645;old_locus_tag=AB69_3370 NZ_JHDO01000100.1 Protein Homology CDS 262926 265277 . + 0 ID=cds-WP_000695487.1;Parent=gene-AB69_RS06645;Dbxref=GenBank:WP_000695487.1;Name=WP_000695487.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AB69_RS06645;product=alpha-glucosidase;protein_id=WP_000695487.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 265703 267721 . + . ID=gene-AB69_RS06640;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AB69_RS06640;old_locus_tag=AB69_3373 NZ_JHDO01000100.1 Protein Homology CDS 265703 267721 . + 0 ID=cds-WP_000121433.1;Parent=gene-AB69_RS06640;Dbxref=GenBank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AB69_RS06640;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121433.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 267766 268182 . - . ID=gene-AB69_RS06635;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AB69_RS06635;old_locus_tag=AB69_3374 NZ_JHDO01000100.1 Protein Homology CDS 267766 268182 . - 0 ID=cds-WP_000560266.1;Parent=gene-AB69_RS06635;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AB69_RS06635;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 268179 268493 . - . ID=gene-AB69_RS06630;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AB69_RS06630;old_locus_tag=AB69_3375 NZ_JHDO01000100.1 Protein Homology CDS 268179 268493 . - 0 ID=cds-WP_000550189.1;Parent=gene-AB69_RS06630;Dbxref=GenBank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AB69_RS06630;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 268777 269913 . - . ID=gene-AB69_RS06625;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AB69_RS06625;old_locus_tag=AB69_3376 NZ_JHDO01000100.1 Protein Homology CDS 268777 269913 . - 0 ID=cds-WP_032191273.1;Parent=gene-AB69_RS06625;Dbxref=GenBank:WP_032191273.1;Name=WP_032191273.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AB69_RS06625;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_032191273.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 269998 270501 . + . ID=gene-AB69_RS06620;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AB69_RS06620;old_locus_tag=AB69_3377 NZ_JHDO01000100.1 Protein Homology CDS 269998 270501 . + 0 ID=cds-WP_001295542.1;Parent=gene-AB69_RS06620;Dbxref=GenBank:WP_001295542.1;Name=WP_001295542.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311994.2;locus_tag=AB69_RS06620;product=M48 metallopeptidase family protein;protein_id=WP_001295542.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 270578 271261 . + . ID=gene-AB69_RS06615;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AB69_RS06615;old_locus_tag=AB69_3378 NZ_JHDO01000100.1 Protein Homology CDS 270578 271261 . + 0 ID=cds-WP_001183046.1;Parent=gene-AB69_RS06615;Dbxref=GenBank:WP_001183046.1;Name=WP_001183046.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183047.1;locus_tag=AB69_RS06615;product=SanA/YdcF family protein;protein_id=WP_001183046.1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 271340 272325 . + . ID=gene-AB69_RS06610;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=pseudogene;locus_tag=AB69_RS06610;old_locus_tag=AB69_3379;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 271340 272325 . + 0 ID=cds-AB69_RS06610;Parent=gene-AB69_RS06610;Note=frameshifted;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311996.2;locus_tag=AB69_RS06610;product=Gfo/Idh/MocA family protein;pseudo=true;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 272608 273573 . + . ID=gene-AB69_RS06605;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AB69_RS06605;old_locus_tag=AB69_3380 NZ_JHDO01000100.1 Protein Homology CDS 272608 273573 . + 0 ID=cds-WP_001098806.1;Parent=gene-AB69_RS06605;Dbxref=GenBank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=AB69_RS06605;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 273976 275220 . + . ID=gene-AB69_RS06600;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AB69_RS06600;old_locus_tag=AB69_3381 NZ_JHDO01000100.1 Protein Homology CDS 273976 275220 . + 0 ID=cds-WP_000211655.1;Parent=gene-AB69_RS06600;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AB69_RS06600;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 275225 275776 . - . ID=gene-AB69_RS06595;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AB69_RS06595;old_locus_tag=AB69_3382 NZ_JHDO01000100.1 Protein Homology CDS 275225 275776 . - 0 ID=cds-WP_000128138.1;Parent=gene-AB69_RS06595;Dbxref=GenBank:WP_000128138.1;Name=WP_000128138.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417561.1;locus_tag=AB69_RS06595;product=YgjV family protein;protein_id=WP_000128138.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 275859 277346 . - . ID=gene-AB69_RS06590;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AB69_RS06590;old_locus_tag=AB69_3383 NZ_JHDO01000100.1 Protein Homology CDS 275859 277346 . - 0 ID=cds-WP_001199390.1;Parent=gene-AB69_RS06590;Dbxref=GenBank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AB69_RS06590;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 277361 278773 . - . ID=gene-AB69_RS06585;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AB69_RS06585;old_locus_tag=AB69_3384 NZ_JHDO01000100.1 Protein Homology CDS 277361 278773 . - 0 ID=cds-WP_000187442.1;Parent=gene-AB69_RS06585;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AB69_RS06585;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 279256 280554 . + . ID=gene-AB69_RS06580;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AB69_RS06580;old_locus_tag=AB69_3385 NZ_JHDO01000100.1 Protein Homology CDS 279256 280554 . + 0 ID=cds-WP_001226465.1;Parent=gene-AB69_RS06580;Dbxref=GenBank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AB69_RS06580;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 280684 281460 . + . ID=gene-AB69_RS06575;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AB69_RS06575;old_locus_tag=AB69_3386 NZ_JHDO01000100.1 Protein Homology CDS 280684 281460 . + 0 ID=cds-WP_000406488.1;Parent=gene-AB69_RS06575;Dbxref=GenBank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AB69_RS06575;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 281700 281783 . + . ID=gene-AB69_RS30425;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AB69_RS30425 NZ_JHDO01000100.1 Protein Homology CDS 281700 281783 . + 0 ID=cds-WP_211180508.1;Parent=gene-AB69_RS30425;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AB69_RS30425;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 281805 282467 . + . ID=gene-AB69_RS06570;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AB69_RS06570;old_locus_tag=AB69_3388 NZ_JHDO01000100.1 Protein Homology CDS 281805 282467 . + 0 ID=cds-WP_000422149.1;Parent=gene-AB69_RS06570;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AB69_RS06570;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 282471 282854 . + . ID=gene-AB69_RS06565;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AB69_RS06565;old_locus_tag=AB69_3389 NZ_JHDO01000100.1 Protein Homology CDS 282471 282854 . + 0 ID=cds-WP_001166760.1;Parent=gene-AB69_RS06565;Dbxref=GenBank:WP_001166760.1;Name=WP_001166760.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AB69_RS06565;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166760.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 283001 283369 . + . ID=gene-AB69_RS06560;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AB69_RS06560;old_locus_tag=AB69_3390 NZ_JHDO01000100.1 Protein Homology CDS 283001 283369 . + 0 ID=cds-WP_001295543.1;Parent=gene-AB69_RS06560;Dbxref=GenBank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AB69_RS06560;product=DUF1090 family protein YqjC;protein_id=WP_001295543.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 283407 283712 . + . ID=gene-AB69_RS06555;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AB69_RS06555;old_locus_tag=AB69_3391 NZ_JHDO01000100.1 Protein Homology CDS 283407 283712 . + 0 ID=cds-WP_000031415.1;Parent=gene-AB69_RS06555;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AB69_RS06555;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 283715 284119 . + . ID=gene-AB69_RS06550;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AB69_RS06550;old_locus_tag=AB69_3392 NZ_JHDO01000100.1 Protein Homology CDS 283715 284119 . + 0 ID=cds-WP_000785722.1;Parent=gene-AB69_RS06550;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AB69_RS06550;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 284109 284408 . + . ID=gene-AB69_RS06545;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AB69_RS06545;old_locus_tag=AB69_3393 NZ_JHDO01000100.1 Protein Homology CDS 284109 284408 . + 0 ID=cds-WP_000096091.1;Parent=gene-AB69_RS06545;Dbxref=GenBank:WP_000096091.1;Name=WP_000096091.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417571.1;locus_tag=AB69_RS06545;product=YqjK-like family protein;protein_id=WP_000096091.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 284594 284986 . + . ID=gene-AB69_RS06540;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AB69_RS06540;old_locus_tag=AB69_3394 NZ_JHDO01000100.1 Protein Homology CDS 284594 284986 . + 0 ID=cds-WP_000732240.1;Parent=gene-AB69_RS06540;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AB69_RS06540;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 285056 286042 . + . ID=gene-AB69_RS06535;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AB69_RS06535;old_locus_tag=AB69_3395 NZ_JHDO01000100.1 Protein Homology CDS 285056 286042 . + 0 ID=cds-WP_000531213.1;Parent=gene-AB69_RS06535;Dbxref=GenBank:WP_000531213.1;Name=WP_000531213.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417573.1;locus_tag=AB69_RS06535;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531213.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 286336 286701 . + . ID=gene-AB69_RS06530;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AB69_RS06530;old_locus_tag=AB69_3396 NZ_JHDO01000100.1 Protein Homology CDS 286336 286701 . + 0 ID=cds-WP_000384145.1;Parent=gene-AB69_RS06530;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AB69_RS06530;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 286943 287299 . + . ID=gene-AB69_RS06525;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;locus_tag=AB69_RS06525;old_locus_tag=AB69_3397 NZ_JHDO01000100.1 Protein Homology CDS 286943 287299 . + 0 ID=cds-WP_001198807.1;Parent=gene-AB69_RS06525;Dbxref=GenBank:WP_001198807.1;Name=WP_001198807.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AB69_RS06525;product=DUF805 domain-containing protein;protein_id=WP_001198807.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 287350 288246 . - . ID=gene-AB69_RS06520;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AB69_RS06520;old_locus_tag=AB69_3398 NZ_JHDO01000100.1 Protein Homology CDS 287350 288246 . - 0 ID=cds-WP_001041009.1;Parent=gene-AB69_RS06520;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AB69_RS06520;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 288351 289052 . + . ID=gene-AB69_RS06515;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AB69_RS06515;old_locus_tag=AB69_3399 NZ_JHDO01000100.1 Protein Homology CDS 288351 289052 . + 0 ID=cds-WP_000633576.1;Parent=gene-AB69_RS06515;Dbxref=GenBank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AB69_RS06515;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 289075 289239 . + . ID=gene-AB69_RS06510;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AB69_RS06510;old_locus_tag=AB69_3400 NZ_JHDO01000100.1 Protein Homology CDS 289075 289239 . + 0 ID=cds-WP_001345966.1;Parent=gene-AB69_RS06510;Dbxref=GenBank:WP_001345966.1;Name=WP_001345966.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417578.2;locus_tag=AB69_RS06510;product=protein YhaL;protein_id=WP_001345966.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 289373 290683 . - . ID=gene-AB69_RS06505;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AB69_RS06505;old_locus_tag=AB69_3401 NZ_JHDO01000100.1 Protein Homology CDS 289373 290683 . - 0 ID=cds-WP_000460499.1;Parent=gene-AB69_RS06505;Dbxref=GenBank:WP_000460499.1;Name=WP_000460499.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026202.1;locus_tag=AB69_RS06505;product=cysteine desulfidase;protein_id=WP_000460499.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 290711 292042 . - . ID=gene-AB69_RS06500;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AB69_RS06500;old_locus_tag=AB69_3402 NZ_JHDO01000100.1 Protein Homology CDS 290711 292042 . - 0 ID=cds-WP_032231466.1;Parent=gene-AB69_RS06500;Dbxref=GenBank:WP_032231466.1;Name=WP_032231466.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AB69_RS06500;product=amino acid permease;protein_id=WP_032231466.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 292317 293681 . - . ID=gene-AB69_RS06495;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AB69_RS06495;old_locus_tag=AB69_3403 NZ_JHDO01000100.1 Protein Homology CDS 292317 293681 . - 0 ID=cds-WP_000622126.1;Parent=gene-AB69_RS06495;Dbxref=GenBank:WP_000622126.1;Name=WP_000622126.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AB69_RS06495;product=L-serine ammonia-lyase;protein_id=WP_000622126.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 293753 294142 . - . ID=gene-AB69_RS06490;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AB69_RS06490;old_locus_tag=AB69_3404 NZ_JHDO01000100.1 Protein Homology CDS 293753 294142 . - 0 ID=cds-WP_000719990.1;Parent=gene-AB69_RS06490;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AB69_RS06490;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 294156 296450 . - . ID=gene-AB69_RS06485;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AB69_RS06485;old_locus_tag=AB69_3405 NZ_JHDO01000100.1 Protein Homology CDS 294156 296450 . - 0 ID=cds-WP_000861734.1;Parent=gene-AB69_RS06485;Dbxref=GenBank:WP_000861734.1;Name=WP_000861734.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AB69_RS06485;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861734.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 296484 297692 . - . ID=gene-AB69_RS06480;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AB69_RS06480;old_locus_tag=AB69_3406 NZ_JHDO01000100.1 Protein Homology CDS 296484 297692 . - 0 ID=cds-WP_001295545.1;Parent=gene-AB69_RS06480;Dbxref=GenBank:WP_001295545.1;Name=WP_001295545.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AB69_RS06480;product=propionate kinase;protein_id=WP_001295545.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 297718 299049 . - . ID=gene-AB69_RS06475;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AB69_RS06475;old_locus_tag=AB69_3407 NZ_JHDO01000100.1 Protein Homology CDS 297718 299049 . - 0 ID=cds-WP_000107723.1;Parent=gene-AB69_RS06475;Dbxref=GenBank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AB69_RS06475;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 299071 300060 . - . ID=gene-AB69_RS06470;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AB69_RS06470;old_locus_tag=AB69_3408 NZ_JHDO01000100.1 Protein Homology CDS 299071 300060 . - 0 ID=cds-WP_000548347.1;Parent=gene-AB69_RS06470;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AB69_RS06470;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 300159 301097 . - . ID=gene-AB69_RS06465;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AB69_RS06465;old_locus_tag=AB69_3409 NZ_JHDO01000100.1 Protein Homology CDS 300159 301097 . - 0 ID=cds-WP_000104211.1;Parent=gene-AB69_RS06465;Dbxref=GenBank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AB69_RS06465;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 301412 301630 . + . ID=gene-AB69_RS30075;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AB69_RS30075 NZ_JHDO01000100.1 Protein Homology CDS 301412 301630 . + 0 ID=cds-WP_001301311.1;Parent=gene-AB69_RS30075;Dbxref=GenBank:WP_001301311.1;Name=WP_001301311.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AB69_RS30075;product=transcriptional activator TdcR;protein_id=WP_001301311.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 301886 302425 . + . ID=gene-AB69_RS06455;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AB69_RS06455;old_locus_tag=AB69_3412 NZ_JHDO01000100.1 Protein Homology CDS 301886 302425 . + 0 ID=cds-WP_000675733.1;Parent=gene-AB69_RS06455;Dbxref=GenBank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AB69_RS06455;product=protein YhaB;protein_id=WP_000675733.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 302447 303634 . + . ID=gene-AB69_RS06450;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=protein_coding;locus_tag=AB69_RS06450;old_locus_tag=AB69_3413 NZ_JHDO01000100.1 Protein Homology CDS 302447 303634 . + 0 ID=cds-WP_000484598.1;Parent=gene-AB69_RS06450;Dbxref=GenBank:WP_000484598.1;Name=WP_000484598.1;gbkey=CDS;gene=yhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AB69_RS06450;product=YhaC family protein;protein_id=WP_000484598.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 304700 305076 . - . ID=gene-AB69_RS25680;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AB69_RS25680 NZ_JHDO01000100.1 cmsearch RNase_P_RNA 304700 305076 . - . ID=rna-AB69_RS25680;Parent=gene-AB69_RS25680;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25680;product=RNase P RNA component class A NZ_JHDO01000100.1 cmsearch exon 304700 305076 . - . ID=exon-AB69_RS25680-1;Parent=rna-AB69_RS25680;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25680;product=RNase P RNA component class A NZ_JHDO01000100.1 RefSeq gene 305109 306254 . - . ID=gene-AB69_RS06445;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AB69_RS06445;old_locus_tag=AB69_3415 NZ_JHDO01000100.1 Protein Homology CDS 305109 306254 . - 0 ID=cds-WP_001300387.1;Parent=gene-AB69_RS06445;Dbxref=GenBank:WP_001300387.1;Name=WP_001300387.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417593.4;locus_tag=AB69_RS06445;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11 NZ_JHDO01000100.1 RefSeq gene 306351 307205 . - . ID=gene-AB69_RS06440;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AB69_RS06440;old_locus_tag=AB69_3416 NZ_JHDO01000100.1 Protein Homology CDS 306351 307205 . - 0 ID=cds-WP_044717477.1;Parent=gene-AB69_RS06440;Dbxref=GenBank:WP_044717477.1;Name=WP_044717477.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178109.1;locus_tag=AB69_RS06440;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_044717477.1;transl_table=11 NZ_JHDO01000100.1 RefSeq pseudogene 307269 307821 . + . ID=gene-AB69_RS28915;Name=AB69_RS28915;end_range=307821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28915;partial=true;pseudo=true NZ_JHDO01000100.1 Protein Homology CDS 307269 307821 . + 0 ID=cds-AB69_RS28915;Parent=gene-AB69_RS28915;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=307821,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28915;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000101.1 1 1785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000101.1 RefSeq region 1 1785 . + . ID=NZ_JHDO01000101.1:1..1785;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000101.1 RefSeq gene 1 76 . + . ID=gene-AB69_RS06430;Name=AB69_RS06430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS06430;old_locus_tag=AB69_3418 NZ_JHDO01000101.1 tRNAscan-SE tRNA 1 76 . + . ID=rna-AB69_RS06430;Parent=gene-AB69_RS06430;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06430;product=tRNA-Lys NZ_JHDO01000101.1 tRNAscan-SE exon 1 76 . + . ID=exon-AB69_RS06430-1;Parent=rna-AB69_RS06430;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06430;product=tRNA-Lys NZ_JHDO01000101.1 RefSeq gene 107 232 . + . ID=gene-AB69_RS25795;Name=AB69_RS25795;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB69_RS25795 NZ_JHDO01000101.1 cmsearch ncRNA 107 232 . + . ID=rna-AB69_RS25795;Parent=gene-AB69_RS25795;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25795;product=RtT sRNA NZ_JHDO01000101.1 cmsearch exon 107 232 . + . ID=exon-AB69_RS25795-1;Parent=rna-AB69_RS25795;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS25795;product=RtT sRNA NZ_JHDO01000101.1 RefSeq gene 341 1183 . - . ID=gene-AB69_RS06425;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AB69_RS06425;old_locus_tag=AB69_3419 NZ_JHDO01000101.1 Protein Homology CDS 341 1183 . - 0 ID=cds-WP_044709033.1;Parent=gene-AB69_RS06425;Dbxref=GenBank:WP_044709033.1;Name=WP_044709033.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692954.1;locus_tag=AB69_RS06425;product=DNA-binding transcriptional regulator XapR;protein_id=WP_044709033.1;transl_table=11 NZ_JHDO01000101.1 RefSeq pseudogene 1233 1785 . + . ID=gene-AB69_RS28920;Name=AB69_RS28920;end_range=1785,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28920;partial=true;pseudo=true NZ_JHDO01000101.1 Protein Homology CDS 1233 1785 . + 0 ID=cds-AB69_RS28920;Parent=gene-AB69_RS28920;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1785,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28920;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000102.1 1 2116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000102.1 RefSeq region 1 2116 . + . ID=NZ_JHDO01000102.1:1..2116;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000102.1 RefSeq gene 1 550 . - . ID=gene-AB69_RS06415;Name=AB69_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS06415;old_locus_tag=AB69_3421;partial=true;start_range=.,1 NZ_JHDO01000102.1 Protein Homology CDS 1 550 . - 0 ID=cds-WP_016247604.1-5;Parent=gene-AB69_RS06415;Dbxref=GenBank:WP_016247604.1;Name=WP_016247604.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB69_RS06415;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_016247604.1;start_range=.,1;transl_table=11 NZ_JHDO01000102.1 RefSeq pseudogene 614 1489 . + . ID=gene-AB69_RS06410;Name=AB69_RS06410;end_range=1489,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS06410;old_locus_tag=AB69_3422;partial=true;pseudo=true;start_range=.,614 NZ_JHDO01000102.1 Protein Homology CDS 614 1489 . + 0 ID=cds-AB69_RS06410;Parent=gene-AB69_RS06410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1489,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=AB69_RS06410;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,614;transl_table=11 NZ_JHDO01000102.1 RefSeq pseudogene 1547 1699 . + . ID=gene-AB69_RS27605;Name=AB69_RS27605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27605;partial=true;pseudo=true;start_range=.,1547 NZ_JHDO01000102.1 Protein Homology CDS 1547 1699 . + 0 ID=cds-AB69_RS27605;Parent=gene-AB69_RS27605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB69_RS27605;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1547;transl_table=11 NZ_JHDO01000102.1 RefSeq gene 1736 2116 . + . ID=gene-AB69_RS0125045;Name=AB69_RS0125045;end_range=2116,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0125045;old_locus_tag=AB69_3423;partial=true NZ_JHDO01000102.1 Protein Homology CDS 1736 2116 . + 0 ID=cds-WP_432757334.1;Parent=gene-AB69_RS0125045;Dbxref=GenBank:WP_432757334.1;Name=WP_432757334.1;end_range=2116,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AB69_RS0125045;partial=true;product=DNA-binding domain-containing protein;protein_id=WP_432757334.1;transl_table=11 ##sequence-region NZ_JHDO01000103.1 1 4415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000103.1 RefSeq region 1 4415 . + . ID=NZ_JHDO01000103.1:1..4415;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000103.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS06405;Name=AB69_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS06405;old_locus_tag=AB69_3424 NZ_JHDO01000103.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-12;Parent=gene-AB69_RS06405;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS06405;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000103.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-12;Parent=gene-AB69_RS06405;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS06405;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000103.1 RefSeq pseudogene 762 956 . + . ID=gene-AB69_RS27615;Name=AB69_RS27615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27615;old_locus_tag=AB69_3425;partial=true;pseudo=true;start_range=.,762 NZ_JHDO01000103.1 Protein Homology CDS 762 956 . + 0 ID=cds-AB69_RS27615;Parent=gene-AB69_RS27615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AB69_RS27615;partial=true;product=fimbrial biogenesis chaperone;pseudo=true;start_range=.,762;transl_table=11 NZ_JHDO01000103.1 RefSeq gene 985 3501 . + . ID=gene-AB69_RS06395;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=AB69_RS06395;old_locus_tag=AB69_3426 NZ_JHDO01000103.1 Protein Homology CDS 985 3501 . + 0 ID=cds-WP_001355538.1;Parent=gene-AB69_RS06395;Dbxref=GenBank:WP_001355538.1;Name=WP_001355538.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=yraJ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AB69_RS06395;product=fimbria/pilus outer membrane usher protein;protein_id=WP_001355538.1;transl_table=11 NZ_JHDO01000103.1 RefSeq pseudogene 3512 4024 . + . ID=gene-AB69_RS0125050;Name=AB69_RS0125050;end_range=4024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0125050;old_locus_tag=AB69_3427;partial=true;pseudo=true NZ_JHDO01000103.1 Protein Homology CDS 3512 4024 . + 0 ID=cds-AB69_RS0125050;Parent=gene-AB69_RS0125050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4024,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AB69_RS0125050;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JHDO01000103.1 RefSeq gene 4035 4415 . - . ID=gene-AB69_RS27620;Name=AB69_RS27620;end_range=4415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS27620;partial=true NZ_JHDO01000103.1 Protein Homology CDS 4035 4415 . - 0 ID=cds-WP_000900114.1;Parent=gene-AB69_RS27620;Dbxref=GenBank:WP_000900114.1;Name=WP_000900114.1;end_range=4415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AB69_RS27620;partial=true;product=IS3 family transposase;protein_id=WP_000900114.1;transl_table=11 ##sequence-region NZ_JHDO01000104.1 1 132895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000104.1 RefSeq region 1 132895 . + . ID=NZ_JHDO01000104.1:1..132895;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000104.1 RefSeq gene 1 284 . - . ID=gene-AB69_RS06390;Name=AB69_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS06390;old_locus_tag=AB69_3428;partial=true;start_range=.,1 NZ_JHDO01000104.1 Protein Homology CDS 1 284 . - 0 ID=cds-WP_000567735.1;Parent=gene-AB69_RS06390;Dbxref=GenBank:WP_000567735.1;Name=WP_000567735.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS06390;partial=true;product=transposase;protein_id=WP_000567735.1;start_range=.,1;transl_table=11 NZ_JHDO01000104.1 RefSeq pseudogene 376 960 . + . ID=gene-AB69_RS06385;Name=AB69_RS06385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS06385;old_locus_tag=AB69_3429;partial=true;pseudo=true;start_range=.,376 NZ_JHDO01000104.1 Protein Homology CDS 376 960 . + 0 ID=cds-AB69_RS06385;Parent=gene-AB69_RS06385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AB69_RS06385;partial=true;product=fimbrial protein;pseudo=true;start_range=.,376;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 1003 1863 . - . ID=gene-AB69_RS06380;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AB69_RS06380;old_locus_tag=AB69_3430 NZ_JHDO01000104.1 Protein Homology CDS 1003 1863 . - 0 ID=cds-WP_032231479.1;Parent=gene-AB69_RS06380;Dbxref=GenBank:WP_032231479.1;Name=WP_032231479.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AB69_RS06380;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_032231479.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 1928 3964 . + . ID=gene-AB69_RS06375;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AB69_RS06375;old_locus_tag=AB69_3431 NZ_JHDO01000104.1 Protein Homology CDS 1928 3964 . + 0 ID=cds-WP_000249104.1;Parent=gene-AB69_RS06375;Dbxref=GenBank:WP_000249104.1;Name=WP_000249104.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AB69_RS06375;product=penicillin-binding protein activator LpoA;protein_id=WP_000249104.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 3922 4317 . + . ID=gene-AB69_RS06370;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AB69_RS06370;old_locus_tag=AB69_3432 NZ_JHDO01000104.1 Protein Homology CDS 3922 4317 . + 0 ID=cds-WP_000246830.1;Parent=gene-AB69_RS06370;Dbxref=GenBank:WP_000246830.1;Name=WP_000246830.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AB69_RS06370;product=YraN family protein;protein_id=WP_000246830.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 4337 4927 . + . ID=gene-AB69_RS06365;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AB69_RS06365;old_locus_tag=AB69_3433 NZ_JHDO01000104.1 Protein Homology CDS 4337 4927 . + 0 ID=cds-WP_001158034.1;Parent=gene-AB69_RS06365;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AB69_RS06365;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 4937 5512 . + . ID=gene-AB69_RS06360;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AB69_RS06360;old_locus_tag=AB69_3434 NZ_JHDO01000104.1 Protein Homology CDS 4937 5512 . + 0 ID=cds-WP_000646033.1;Parent=gene-AB69_RS06360;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AB69_RS06360;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 5626 6666 . - . ID=gene-AB69_RS06355;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AB69_RS06355;old_locus_tag=AB69_3435 NZ_JHDO01000104.1 Protein Homology CDS 5626 6666 . - 0 ID=cds-WP_000147574.1;Parent=gene-AB69_RS06355;Dbxref=GenBank:WP_000147574.1;Name=WP_000147574.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AB69_RS06355;product=permease;protein_id=WP_000147574.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 6739 7374 . - . ID=gene-AB69_RS06350;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AB69_RS06350;old_locus_tag=AB69_3436 NZ_JHDO01000104.1 Protein Homology CDS 6739 7374 . - 0 ID=cds-WP_001300423.1;Parent=gene-AB69_RS06350;Dbxref=GenBank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AB69_RS06350;product=NAD(P)H-binding protein;protein_id=WP_001300423.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 7502 8020 . + . ID=gene-AB69_RS06345;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AB69_RS06345;old_locus_tag=AB69_3437 NZ_JHDO01000104.1 Protein Homology CDS 7502 8020 . + 0 ID=cds-WP_000037608.1;Parent=gene-AB69_RS06345;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AB69_RS06345;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 8000 8443 . - . ID=gene-AB69_RS06340;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AB69_RS06340;old_locus_tag=AB69_3438 NZ_JHDO01000104.1 Protein Homology CDS 8000 8443 . - 0 ID=cds-WP_000449030.1;Parent=gene-AB69_RS06340;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AB69_RS06340;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 8494 8796 . + . ID=gene-AB69_RS06335;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AB69_RS06335;old_locus_tag=AB69_3439 NZ_JHDO01000104.1 Protein Homology CDS 8494 8796 . + 0 ID=cds-WP_000189333.1;Parent=gene-AB69_RS06335;Dbxref=GenBank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417624.1;locus_tag=AB69_RS06335;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189333.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 8783 9286 . - . ID=gene-AB69_RS06330;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AB69_RS06330;old_locus_tag=AB69_3440 NZ_JHDO01000104.1 Protein Homology CDS 8783 9286 . - 0 ID=cds-WP_000908554.1;Parent=gene-AB69_RS06330;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AB69_RS06330;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 9280 9804 . - . ID=gene-AB69_RS06325;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AB69_RS06325;old_locus_tag=AB69_3441 NZ_JHDO01000104.1 Protein Homology CDS 9280 9804 . - 0 ID=cds-WP_001295552.1;Parent=gene-AB69_RS06325;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AB69_RS06325;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 10013 11008 . + . ID=gene-AB69_RS06320;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AB69_RS06320;old_locus_tag=AB69_3442 NZ_JHDO01000104.1 Protein Homology CDS 10013 11008 . + 0 ID=cds-WP_001311152.1;Parent=gene-AB69_RS06320;Dbxref=GenBank:WP_001311152.1;Name=WP_001311152.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AB69_RS06320;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_001311152.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 11017 11895 . + . ID=gene-AB69_RS06315;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AB69_RS06315;old_locus_tag=AB69_3443 NZ_JHDO01000104.1 Protein Homology CDS 11017 11895 . + 0 ID=cds-WP_001301318.1;Parent=gene-AB69_RS06315;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AB69_RS06315;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 11976 12983 . + . ID=gene-AB69_RS06310;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AB69_RS06310;old_locus_tag=AB69_3444 NZ_JHDO01000104.1 Protein Homology CDS 11976 12983 . + 0 ID=cds-WP_000130380.1;Parent=gene-AB69_RS06310;Dbxref=GenBank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AB69_RS06310;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 13101 14345 . - . ID=gene-AB69_RS06305;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AB69_RS06305;old_locus_tag=AB69_3445 NZ_JHDO01000104.1 Protein Homology CDS 13101 14345 . - 0 ID=cds-WP_000224351.1;Parent=gene-AB69_RS06305;Dbxref=GenBank:WP_000224351.1;Name=WP_000224351.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AB69_RS06305;product=tryptophan permease;protein_id=WP_000224351.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 14499 16388 . - . ID=gene-AB69_RS06295;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AB69_RS06295;old_locus_tag=AB69_3447 NZ_JHDO01000104.1 Protein Homology CDS 14499 16388 . - 0 ID=cds-WP_001295553.1;Parent=gene-AB69_RS06295;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AB69_RS06295;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 16381 16461 . - . ID=gene-AB69_RS28930;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AB69_RS28930 NZ_JHDO01000104.1 Protein Homology CDS 16381 16461 . - 0 ID=cds-WP_010723222.1;Parent=gene-AB69_RS28930;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AB69_RS28930;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 16568 17452 . - . ID=gene-AB69_RS06290;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AB69_RS06290;old_locus_tag=AB69_3448 NZ_JHDO01000104.1 Protein Homology CDS 16568 17452 . - 0 ID=cds-WP_000802080.1;Parent=gene-AB69_RS06290;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AB69_RS06290;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 17561 19696 . - . ID=gene-AB69_RS06285;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AB69_RS06285;old_locus_tag=AB69_3449 NZ_JHDO01000104.1 Protein Homology CDS 17561 19696 . - 0 ID=cds-WP_001295554.1;Parent=gene-AB69_RS06285;Dbxref=GenBank:WP_001295554.1;Name=WP_001295554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AB69_RS06285;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 19943 20212 . - . ID=gene-AB69_RS06280;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AB69_RS06280;old_locus_tag=AB69_3450 NZ_JHDO01000104.1 Protein Homology CDS 19943 20212 . - 0 ID=cds-WP_000059466.1;Parent=gene-AB69_RS06280;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AB69_RS06280;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 20361 21305 . - . ID=gene-AB69_RS06275;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AB69_RS06275;old_locus_tag=AB69_3451 NZ_JHDO01000104.1 Protein Homology CDS 20361 21305 . - 0 ID=cds-WP_000089698.1;Parent=gene-AB69_RS06275;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AB69_RS06275;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 21305 21706 . - . ID=gene-AB69_RS06270;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AB69_RS06270;old_locus_tag=AB69_3452 NZ_JHDO01000104.1 Protein Homology CDS 21305 21706 . - 0 ID=cds-WP_001040205.1;Parent=gene-AB69_RS06270;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AB69_RS06270;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 21870 24542 . - . ID=gene-AB69_RS06265;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AB69_RS06265;old_locus_tag=AB69_3453 NZ_JHDO01000104.1 Protein Homology CDS 21870 24542 . - 0 ID=cds-WP_000133044.1;Parent=gene-AB69_RS06265;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AB69_RS06265;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 24567 26054 . - . ID=gene-AB69_RS06260;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AB69_RS06260;old_locus_tag=AB69_3454 NZ_JHDO01000104.1 Protein Homology CDS 24567 26054 . - 0 ID=cds-WP_001031057.1;Parent=gene-AB69_RS06260;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AB69_RS06260;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 26082 26534 . - . ID=gene-AB69_RS06255;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AB69_RS06255;old_locus_tag=AB69_3455 NZ_JHDO01000104.1 Protein Homology CDS 26082 26534 . - 0 ID=cds-WP_001300397.1;Parent=gene-AB69_RS06255;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AB69_RS06255;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 26741 26817 . - . ID=gene-AB69_RS06250;Name=AB69_RS06250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS06250;old_locus_tag=AB69_3456 NZ_JHDO01000104.1 tRNAscan-SE tRNA 26741 26817 . - . ID=rna-AB69_RS06250;Parent=gene-AB69_RS06250;anticodon=(pos:complement(26781..26783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06250;product=tRNA-Met NZ_JHDO01000104.1 tRNAscan-SE exon 26741 26817 . - . ID=exon-AB69_RS06250-1;Parent=rna-AB69_RS06250;anticodon=(pos:complement(26781..26783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06250;product=tRNA-Met NZ_JHDO01000104.1 RefSeq gene 27165 28508 . + . ID=gene-AB69_RS06245;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AB69_RS06245;old_locus_tag=AB69_3458 NZ_JHDO01000104.1 Protein Homology CDS 27165 28508 . + 0 ID=cds-WP_000207680.1;Parent=gene-AB69_RS06245;Dbxref=GenBank:WP_000207680.1;Name=WP_000207680.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AB69_RS06245;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 28516 30141 . - . ID=gene-AB69_RS06240;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AB69_RS06240;old_locus_tag=AB69_3459 NZ_JHDO01000104.1 Protein Homology CDS 28516 30141 . - 0 ID=cds-WP_001333576.1;Parent=gene-AB69_RS06240;Dbxref=GenBank:WP_001333576.1;Name=WP_001333576.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AB69_RS06240;product=phosphoethanolamine transferase;protein_id=WP_001333576.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 30600 30686 . - . ID=gene-AB69_RS06235;Name=AB69_RS06235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS06235;old_locus_tag=AB69_3460 NZ_JHDO01000104.1 tRNAscan-SE tRNA 30600 30686 . - . ID=rna-AB69_RS06235;Parent=gene-AB69_RS06235;anticodon=(pos:complement(30650..30652));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06235;product=tRNA-Leu NZ_JHDO01000104.1 tRNAscan-SE exon 30600 30686 . - . ID=exon-AB69_RS06235-1;Parent=rna-AB69_RS06235;anticodon=(pos:complement(30650..30652));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS06235;product=tRNA-Leu NZ_JHDO01000104.1 RefSeq gene 30701 31033 . - . ID=gene-AB69_RS06230;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AB69_RS06230;old_locus_tag=AB69_3461 NZ_JHDO01000104.1 Protein Homology CDS 30701 31033 . - 0 ID=cds-WP_001295556.1;Parent=gene-AB69_RS06230;Dbxref=GenBank:WP_001295556.1;Name=WP_001295556.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AB69_RS06230;product=preprotein translocase subunit SecG;protein_id=WP_001295556.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 31261 32598 . - . ID=gene-AB69_RS06225;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AB69_RS06225;old_locus_tag=AB69_3462 NZ_JHDO01000104.1 Protein Homology CDS 31261 32598 . - 0 ID=cds-WP_000071134.1;Parent=gene-AB69_RS06225;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AB69_RS06225;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 32591 33439 . - . ID=gene-AB69_RS06220;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AB69_RS06220;old_locus_tag=AB69_3463 NZ_JHDO01000104.1 Protein Homology CDS 32591 33439 . - 0 ID=cds-WP_000764731.1;Parent=gene-AB69_RS06220;Dbxref=GenBank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AB69_RS06220;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 33529 35463 . - . ID=gene-AB69_RS06215;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AB69_RS06215;old_locus_tag=AB69_3464 NZ_JHDO01000104.1 Protein Homology CDS 33529 35463 . - 0 ID=cds-WP_001107467.1;Parent=gene-AB69_RS06215;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AB69_RS06215;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 35563 36192 . - . ID=gene-AB69_RS06210;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AB69_RS06210;old_locus_tag=AB69_3465 NZ_JHDO01000104.1 Protein Homology CDS 35563 36192 . - 0 ID=cds-WP_000145975.1;Parent=gene-AB69_RS06210;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AB69_RS06210;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 36318 36611 . + . ID=gene-AB69_RS06205;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AB69_RS06205;old_locus_tag=AB69_3466 NZ_JHDO01000104.1 Protein Homology CDS 36318 36611 . + 0 ID=cds-WP_001054420.1;Parent=gene-AB69_RS06205;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AB69_RS06205;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 36767 37243 . - . ID=gene-AB69_RS06200;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AB69_RS06200;old_locus_tag=AB69_3467 NZ_JHDO01000104.1 Protein Homology CDS 36767 37243 . - 0 ID=cds-WP_001148001.1;Parent=gene-AB69_RS06200;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AB69_RS06200;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 37491 38924 . + . ID=gene-AB69_RS06195;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AB69_RS06195;old_locus_tag=AB69_3468 NZ_JHDO01000104.1 Protein Homology CDS 37491 38924 . + 0 ID=cds-WP_001569210.1;Parent=gene-AB69_RS06195;Dbxref=GenBank:WP_001569210.1;Name=WP_001569210.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AB69_RS06195;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001569210.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 39110 40282 . - . ID=gene-AB69_RS06190;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AB69_RS06190;old_locus_tag=AB69_3470 NZ_JHDO01000104.1 Protein Homology CDS 39110 40282 . - 0 ID=cds-WP_032231481.1;Parent=gene-AB69_RS06190;Dbxref=GenBank:WP_032231481.1;Name=WP_032231481.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=AB69_RS06190;product=Obg family GTPase CgtA;protein_id=WP_032231481.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 40298 41263 . - . ID=gene-AB69_RS06185;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AB69_RS06185;old_locus_tag=AB69_3471 NZ_JHDO01000104.1 Protein Homology CDS 40298 41263 . - 0 ID=cds-WP_000813037.1;Parent=gene-AB69_RS06185;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AB69_RS06185;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 41390 41647 . - . ID=gene-AB69_RS06180;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AB69_RS06180;old_locus_tag=AB69_3472 NZ_JHDO01000104.1 Protein Homology CDS 41390 41647 . - 0 ID=cds-WP_000940595.1;Parent=gene-AB69_RS06180;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AB69_RS06180;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 41668 41979 . - . ID=gene-AB69_RS06175;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AB69_RS06175;old_locus_tag=AB69_3473 NZ_JHDO01000104.1 Protein Homology CDS 41668 41979 . - 0 ID=cds-WP_000271401.1;Parent=gene-AB69_RS06175;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AB69_RS06175;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 42238 43209 . + . ID=gene-AB69_RS06170;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AB69_RS06170;old_locus_tag=AB69_3474 NZ_JHDO01000104.1 Protein Homology CDS 42238 43209 . + 0 ID=cds-WP_001047336.1;Parent=gene-AB69_RS06170;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AB69_RS06170;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 43438 43716 . + . ID=gene-AB69_RS06165;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AB69_RS06165;old_locus_tag=AB69_3475 NZ_JHDO01000104.1 Protein Homology CDS 43438 43716 . + 0 ID=cds-WP_000445413.1;Parent=gene-AB69_RS06165;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AB69_RS06165;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 43764 45023 . - . ID=gene-AB69_RS06160;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AB69_RS06160;old_locus_tag=AB69_3476 NZ_JHDO01000104.1 Protein Homology CDS 43764 45023 . - 0 ID=cds-WP_000357259.1;Parent=gene-AB69_RS06160;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AB69_RS06160;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 45078 45332 . - . ID=gene-AB69_RS06155;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AB69_RS06155;old_locus_tag=AB69_3477 NZ_JHDO01000104.1 Protein Homology CDS 45078 45332 . - 0 ID=cds-WP_000429656.1;Parent=gene-AB69_RS06155;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AB69_RS06155;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 45492 45785 . - . ID=gene-AB69_RS06150;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AB69_RS06150;old_locus_tag=AB69_3478 NZ_JHDO01000104.1 Protein Homology CDS 45492 45785 . - 0 ID=cds-WP_000004488.1;Parent=gene-AB69_RS06150;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AB69_RS06150;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 45785 46420 . - . ID=gene-AB69_RS06145;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AB69_RS06145;old_locus_tag=AB69_3479 NZ_JHDO01000104.1 Protein Homology CDS 45785 46420 . - 0 ID=cds-WP_000476487.1;Parent=gene-AB69_RS06145;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AB69_RS06145;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 46439 46990 . - . ID=gene-AB69_RS06140;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AB69_RS06140;old_locus_tag=AB69_3480 NZ_JHDO01000104.1 Protein Homology CDS 46439 46990 . - 0 ID=cds-WP_001296448.1;Parent=gene-AB69_RS06140;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AB69_RS06140;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 46995 47777 . - . ID=gene-AB69_RS06135;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AB69_RS06135;old_locus_tag=AB69_3481 NZ_JHDO01000104.1 Protein Homology CDS 46995 47777 . - 0 ID=cds-WP_000925795.1;Parent=gene-AB69_RS06135;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AB69_RS06135;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 47785 48594 . - . ID=gene-AB69_RS06130;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AB69_RS06130;old_locus_tag=AB69_3482 NZ_JHDO01000104.1 Protein Homology CDS 47785 48594 . - 0 ID=cds-WP_000438245.1;Parent=gene-AB69_RS06130;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AB69_RS06130;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 48804 49781 . + . ID=gene-AB69_RS06125;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AB69_RS06125;old_locus_tag=AB69_3483 NZ_JHDO01000104.1 Protein Homology CDS 48804 49781 . + 0 ID=cds-WP_000922901.1;Parent=gene-AB69_RS06125;Dbxref=GenBank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AB69_RS06125;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 49795 50781 . + . ID=gene-AB69_RS06120;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AB69_RS06120;old_locus_tag=AB69_3484 NZ_JHDO01000104.1 Protein Homology CDS 49795 50781 . + 0 ID=cds-WP_001295557.1;Parent=gene-AB69_RS06120;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AB69_RS06120;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 50802 51368 . + . ID=gene-AB69_RS06115;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AB69_RS06115;old_locus_tag=AB69_3485 NZ_JHDO01000104.1 Protein Homology CDS 50802 51368 . + 0 ID=cds-WP_000030005.1;Parent=gene-AB69_RS06115;Dbxref=GenBank:WP_000030005.1;Name=WP_000030005.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AB69_RS06115;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 51365 51940 . + . ID=gene-AB69_RS06110;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AB69_RS06110;old_locus_tag=AB69_3486 NZ_JHDO01000104.1 Protein Homology CDS 51365 51940 . + 0 ID=cds-WP_000030537.1;Parent=gene-AB69_RS06110;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AB69_RS06110;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 51909 52466 . + . ID=gene-AB69_RS06105;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AB69_RS06105;old_locus_tag=AB69_3487 NZ_JHDO01000104.1 Protein Homology CDS 51909 52466 . + 0 ID=cds-WP_000669785.1;Parent=gene-AB69_RS06105;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AB69_RS06105;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 52473 53198 . + . ID=gene-AB69_RS06100;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AB69_RS06100;old_locus_tag=AB69_3488 NZ_JHDO01000104.1 Protein Homology CDS 52473 53198 . + 0 ID=cds-WP_000224099.1;Parent=gene-AB69_RS06100;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AB69_RS06100;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 53246 54679 . + . ID=gene-AB69_RS06095;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AB69_RS06095;old_locus_tag=AB69_3489 NZ_JHDO01000104.1 Protein Homology CDS 53246 54679 . + 0 ID=cds-WP_000809057.1;Parent=gene-AB69_RS06095;Dbxref=GenBank:WP_000809057.1;Name=WP_000809057.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417669.1;locus_tag=AB69_RS06095;product=RNA polymerase factor sigma-54;protein_id=WP_000809057.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 54702 54989 . + . ID=gene-AB69_RS06090;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AB69_RS06090;old_locus_tag=AB69_3490 NZ_JHDO01000104.1 Protein Homology CDS 54702 54989 . + 0 ID=cds-WP_001176599.1;Parent=gene-AB69_RS06090;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AB69_RS06090;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 55107 55598 . + . ID=gene-AB69_RS06085;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AB69_RS06085;old_locus_tag=AB69_3491 NZ_JHDO01000104.1 Protein Homology CDS 55107 55598 . + 0 ID=cds-WP_000183676.1;Parent=gene-AB69_RS06085;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AB69_RS06085;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 55644 56498 . + . ID=gene-AB69_RS06080;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AB69_RS06080;old_locus_tag=AB69_3492 NZ_JHDO01000104.1 Protein Homology CDS 55644 56498 . + 0 ID=cds-WP_000243741.1;Parent=gene-AB69_RS06080;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AB69_RS06080;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 56495 56767 . + . ID=gene-AB69_RS06075;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AB69_RS06075;old_locus_tag=AB69_3493 NZ_JHDO01000104.1 Protein Homology CDS 56495 56767 . + 0 ID=cds-WP_000216791.1;Parent=gene-AB69_RS06075;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AB69_RS06075;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 56981 57613 . + . ID=gene-AB69_RS06070;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AB69_RS06070;old_locus_tag=AB69_3494 NZ_JHDO01000104.1 Protein Homology CDS 56981 57613 . + 0 ID=cds-WP_000620405.1;Parent=gene-AB69_RS06070;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AB69_RS06070;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 57610 58338 . - . ID=gene-AB69_RS06065;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AB69_RS06065;old_locus_tag=AB69_3495 NZ_JHDO01000104.1 Protein Homology CDS 57610 58338 . - 0 ID=cds-WP_000047091.1;Parent=gene-AB69_RS06065;Dbxref=GenBank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AB69_RS06065;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 58335 58988 . - . ID=gene-AB69_RS06060;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AB69_RS06060;old_locus_tag=AB69_3496 NZ_JHDO01000104.1 Protein Homology CDS 58335 58988 . - 0 ID=cds-WP_001300411.1;Parent=gene-AB69_RS06060;Dbxref=GenBank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AB69_RS06060;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 59218 61554 . - . ID=gene-AB69_RS06055;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AB69_RS06055;old_locus_tag=AB69_3497 NZ_JHDO01000104.1 Protein Homology CDS 59218 61554 . - 0 ID=cds-WP_000809774.1;Parent=gene-AB69_RS06055;Dbxref=GenBank:WP_000809774.1;Name=WP_000809774.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AB69_RS06055;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809774.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 61650 62579 . - . ID=gene-AB69_RS06050;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AB69_RS06050;old_locus_tag=AB69_3498 NZ_JHDO01000104.1 Protein Homology CDS 61650 62579 . - 0 ID=cds-WP_001299745.1;Parent=gene-AB69_RS06050;Dbxref=GenBank:WP_001299745.1;Name=WP_001299745.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AB69_RS06050;product=TIGR01212 family radical SAM protein;protein_id=WP_001299745.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 63254 67714 . + . ID=gene-AB69_RS06045;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AB69_RS06045;old_locus_tag=AB69_3499 NZ_JHDO01000104.1 Protein Homology CDS 63254 67714 . + 0 ID=cds-WP_001300352.1;Parent=gene-AB69_RS06045;Dbxref=GenBank:WP_001300352.1;Name=WP_001300352.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AB69_RS06045;product=glutamate synthase large subunit;protein_id=WP_001300352.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 67727 69145 . + . ID=gene-AB69_RS06040;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AB69_RS06040;old_locus_tag=AB69_3500 NZ_JHDO01000104.1 Protein Homology CDS 67727 69145 . + 0 ID=cds-WP_000081674.1;Parent=gene-AB69_RS06040;Dbxref=GenBank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AB69_RS06040;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 69705 70469 . + . ID=gene-AB69_RS06035;Name=gltF;gbkey=Gene;gene=gltF;gene_biotype=protein_coding;locus_tag=AB69_RS06035;old_locus_tag=AB69_3501 NZ_JHDO01000104.1 Protein Homology CDS 69705 70469 . + 0 ID=cds-WP_000465371.1;Parent=gene-AB69_RS06035;Dbxref=GenBank:WP_000465371.1;Name=WP_000465371.1;gbkey=CDS;gene=gltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417681.1;locus_tag=AB69_RS06035;product=DUF1120 domain-containing protein;protein_id=WP_000465371.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 70641 71315 . + . ID=gene-AB69_RS06030;Name=yhcA;gbkey=Gene;gene=yhcA;gene_biotype=protein_coding;locus_tag=AB69_RS06030;old_locus_tag=AB69_3502 NZ_JHDO01000104.1 Protein Homology CDS 70641 71315 . + 0 ID=cds-WP_001311157.1;Parent=gene-AB69_RS06030;Dbxref=GenBank:WP_001311157.1;Name=WP_001311157.1;Ontology_term=GO:0061077;gbkey=CDS;gene=yhcA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417682.1;locus_tag=AB69_RS06030;product=fimbria/pilus chaperone family protein;protein_id=WP_001311157.1;transl_table=11 NZ_JHDO01000104.1 RefSeq pseudogene 71336 73717 . + . ID=gene-AB69_RS0125055;Name=yhcD;gbkey=Gene;gene=yhcD;gene_biotype=pseudogene;locus_tag=AB69_RS0125055;pseudo=true NZ_JHDO01000104.1 Protein Homology CDS 71336 73717 . + 0 ID=cds-AB69_RS0125055;Parent=gene-AB69_RS0125055;Note=internal stop;gbkey=CDS;gene=yhcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417683.1;locus_tag=AB69_RS0125055;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 73714 74259 . + . ID=gene-AB69_RS06025;Name=AB69_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS06025;old_locus_tag=AB69_3505 NZ_JHDO01000104.1 Protein Homology CDS 73714 74259 . + 0 ID=cds-WP_032231482.1;Parent=gene-AB69_RS06025;Dbxref=GenBank:WP_032231482.1;Name=WP_032231482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821351.1;locus_tag=AB69_RS06025;product=YhcE family protein;protein_id=WP_032231482.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 74256 74972 . + . ID=gene-AB69_RS06020;Name=yhcF;gbkey=Gene;gene=yhcF;gene_biotype=protein_coding;locus_tag=AB69_RS06020;old_locus_tag=AB69_3506 NZ_JHDO01000104.1 Protein Homology CDS 74256 74972 . + 0 ID=cds-WP_001067008.1;Parent=gene-AB69_RS06020;Dbxref=GenBank:WP_001067008.1;Name=WP_001067008.1;gbkey=CDS;gene=yhcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AB69_RS06020;product=DUF1120 domain-containing protein;protein_id=WP_001067008.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 75157 76284 . + . ID=gene-AB69_RS06015;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AB69_RS06015;old_locus_tag=AB69_3507 NZ_JHDO01000104.1 Protein Homology CDS 75157 76284 . + 0 ID=cds-WP_000445116.1;Parent=gene-AB69_RS06015;Dbxref=GenBank:WP_000445116.1;Name=WP_000445116.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AB69_RS06015;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000445116.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 76344 76808 . - . ID=gene-AB69_RS06010;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AB69_RS06010;old_locus_tag=AB69_3508 NZ_JHDO01000104.1 Protein Homology CDS 76344 76808 . - 0 ID=cds-WP_000979882.1;Parent=gene-AB69_RS06010;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AB69_RS06010;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 76805 77680 . - . ID=gene-AB69_RS06005;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AB69_RS06005;old_locus_tag=AB69_3509 NZ_JHDO01000104.1 Protein Homology CDS 76805 77680 . - 0 ID=cds-WP_000209011.1;Parent=gene-AB69_RS06005;Dbxref=GenBank:WP_000209011.1;Name=WP_000209011.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AB69_RS06005;product=N-acetylmannosamine kinase;protein_id=WP_000209011.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 77677 78366 . - . ID=gene-AB69_RS06000;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AB69_RS06000;old_locus_tag=AB69_3510 NZ_JHDO01000104.1 Protein Homology CDS 77677 78366 . - 0 ID=cds-WP_000054239.1;Parent=gene-AB69_RS06000;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AB69_RS06000;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 78414 79904 . - . ID=gene-AB69_RS05995;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AB69_RS05995;old_locus_tag=AB69_3511 NZ_JHDO01000104.1 Protein Homology CDS 78414 79904 . - 0 ID=cds-WP_000108459.1;Parent=gene-AB69_RS05995;Dbxref=GenBank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AB69_RS05995;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 80013 80906 . - . ID=gene-AB69_RS05990;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AB69_RS05990;old_locus_tag=AB69_3512 NZ_JHDO01000104.1 Protein Homology CDS 80013 80906 . - 0 ID=cds-WP_000224714.1;Parent=gene-AB69_RS05990;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AB69_RS05990;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 81028 81819 . - . ID=gene-AB69_RS05985;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AB69_RS05985;old_locus_tag=AB69_3513 NZ_JHDO01000104.1 Protein Homology CDS 81028 81819 . - 0 ID=cds-WP_000523845.1;Parent=gene-AB69_RS05985;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AB69_RS05985;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 82198 83565 . + . ID=gene-AB69_RS05980;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB69_RS05980;old_locus_tag=AB69_3514 NZ_JHDO01000104.1 Protein Homology CDS 82198 83565 . + 0 ID=cds-WP_000467018.1;Parent=gene-AB69_RS05980;Dbxref=GenBank:WP_000467018.1;Name=WP_000467018.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AB69_RS05980;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000467018.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 83608 84105 . - . ID=gene-AB69_RS05975;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AB69_RS05975;old_locus_tag=AB69_3515 NZ_JHDO01000104.1 Protein Homology CDS 83608 84105 . - 0 ID=cds-WP_000366129.1;Parent=gene-AB69_RS05975;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AB69_RS05975;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 84111 84749 . - . ID=gene-AB69_RS05970;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AB69_RS05970;old_locus_tag=AB69_3516 NZ_JHDO01000104.1 Protein Homology CDS 84111 84749 . - 0 ID=cds-WP_000257293.1;Parent=gene-AB69_RS05970;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AB69_RS05970;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 85144 85536 . - . ID=gene-AB69_RS05965;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AB69_RS05965;old_locus_tag=AB69_3517 NZ_JHDO01000104.1 Protein Homology CDS 85144 85536 . - 0 ID=cds-WP_000829818.1;Parent=gene-AB69_RS05965;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AB69_RS05965;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 85552 85980 . - . ID=gene-AB69_RS05960;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AB69_RS05960;old_locus_tag=AB69_3518 NZ_JHDO01000104.1 Protein Homology CDS 85552 85980 . - 0 ID=cds-WP_000847559.1;Parent=gene-AB69_RS05960;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AB69_RS05960;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 86199 87326 . - . ID=gene-AB69_RS05955;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AB69_RS05955;old_locus_tag=AB69_3519 NZ_JHDO01000104.1 Protein Homology CDS 86199 87326 . - 0 ID=cds-WP_001192332.1;Parent=gene-AB69_RS05955;Dbxref=GenBank:WP_001192332.1;Name=WP_001192332.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AB69_RS05955;product=cell division protein ZapE;protein_id=WP_001192332.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 87520 87918 . + . ID=gene-AB69_RS05950;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AB69_RS05950;old_locus_tag=AB69_3520 NZ_JHDO01000104.1 Protein Homology CDS 87520 87918 . + 0 ID=cds-WP_001295270.1;Parent=gene-AB69_RS05950;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AB69_RS05950;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 88072 89439 . + . ID=gene-AB69_RS05945;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AB69_RS05945;old_locus_tag=AB69_3521 NZ_JHDO01000104.1 Protein Homology CDS 88072 89439 . + 0 ID=cds-WP_001295271.1;Parent=gene-AB69_RS05945;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AB69_RS05945;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 89529 90596 . + . ID=gene-AB69_RS05940;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AB69_RS05940;old_locus_tag=AB69_3522 NZ_JHDO01000104.1 Protein Homology CDS 89529 90596 . + 0 ID=cds-WP_000497723.1;Parent=gene-AB69_RS05940;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AB69_RS05940;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 90659 91597 . - . ID=gene-AB69_RS05935;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AB69_RS05935;old_locus_tag=AB69_3523 NZ_JHDO01000104.1 Protein Homology CDS 90659 91597 . - 0 ID=cds-WP_001295272.1;Parent=gene-AB69_RS05935;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AB69_RS05935;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 92032 92502 . + . ID=gene-AB69_RS05930;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AB69_RS05930;old_locus_tag=AB69_3524 NZ_JHDO01000104.1 Protein Homology CDS 92032 92502 . + 0 ID=cds-WP_001257846.1;Parent=gene-AB69_RS05930;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AB69_RS05930;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 92867 93130 . + . ID=gene-AB69_RS05925;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AB69_RS05925;old_locus_tag=AB69_3525 NZ_JHDO01000104.1 Protein Homology CDS 92867 93130 . + 0 ID=cds-WP_000695690.1;Parent=gene-AB69_RS05925;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AB69_RS05925;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 93186 93458 . - . ID=gene-AB69_RS05920;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AB69_RS05920;old_locus_tag=AB69_3526 NZ_JHDO01000104.1 Protein Homology CDS 93186 93458 . - 0 ID=cds-WP_001029013.1;Parent=gene-AB69_RS05920;Dbxref=GenBank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AB69_RS05920;product=barstar family protein;protein_id=WP_001029013.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 93550 95517 . - . ID=gene-AB69_RS05915;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AB69_RS05915;old_locus_tag=AB69_3527 NZ_JHDO01000104.1 Protein Homology CDS 93550 95517 . - 0 ID=cds-WP_000510965.1;Parent=gene-AB69_RS05915;Dbxref=GenBank:WP_000510965.1;Name=WP_000510965.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417707.1;locus_tag=AB69_RS05915;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510965.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 95523 96455 . - . ID=gene-AB69_RS05910;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AB69_RS05910;old_locus_tag=AB69_3528 NZ_JHDO01000104.1 Protein Homology CDS 95523 96455 . - 0 ID=cds-WP_000854021.1;Parent=gene-AB69_RS05910;Dbxref=GenBank:WP_000854021.1;Name=WP_000854021.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AB69_RS05910;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 96463 96666 . - . ID=gene-AB69_RS05905;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AB69_RS05905;old_locus_tag=AB69_3529 NZ_JHDO01000104.1 Protein Homology CDS 96463 96666 . - 0 ID=cds-WP_000051841.1;Parent=gene-AB69_RS05905;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AB69_RS05905;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 96849 97778 . + . ID=gene-AB69_RS05900;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AB69_RS05900;old_locus_tag=AB69_3530 NZ_JHDO01000104.1 Protein Homology CDS 96849 97778 . + 0 ID=cds-WP_000440317.1;Parent=gene-AB69_RS05900;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AB69_RS05900;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 97912 99357 . - . ID=gene-AB69_RS05895;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AB69_RS05895;old_locus_tag=AB69_3531 NZ_JHDO01000104.1 Protein Homology CDS 97912 99357 . - 0 ID=cds-WP_032231485.1;Parent=gene-AB69_RS05895;Dbxref=GenBank:WP_032231485.1;Name=WP_032231485.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AB69_RS05895;product=metalloprotease TldD;protein_id=WP_032231485.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 100060 103860 . - . ID=gene-AB69_RS05890;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AB69_RS05890;old_locus_tag=AB69_3532 NZ_JHDO01000104.1 Protein Homology CDS 100060 103860 . - 0 ID=cds-WP_001253618.1;Parent=gene-AB69_RS05890;Dbxref=GenBank:WP_001253618.1;Name=WP_001253618.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AB69_RS05890;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253618.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 103928 105397 . - . ID=gene-AB69_RS05885;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AB69_RS05885;old_locus_tag=AB69_3533 NZ_JHDO01000104.1 Protein Homology CDS 103928 105397 . - 0 ID=cds-WP_000123197.1;Parent=gene-AB69_RS05885;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AB69_RS05885;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 105387 105980 . - . ID=gene-AB69_RS05880;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AB69_RS05880;old_locus_tag=AB69_3534 NZ_JHDO01000104.1 Protein Homology CDS 105387 105980 . - 0 ID=cds-WP_000203105.1;Parent=gene-AB69_RS05880;Dbxref=GenBank:WP_000203105.1;Name=WP_000203105.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417714.1;locus_tag=AB69_RS05880;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203105.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 105989 106477 . - . ID=gene-AB69_RS05875;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AB69_RS05875;old_locus_tag=AB69_3535 NZ_JHDO01000104.1 Protein Homology CDS 105989 106477 . - 0 ID=cds-WP_000179409.1;Parent=gene-AB69_RS05875;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AB69_RS05875;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 106477 107580 . - . ID=gene-AB69_RS05870;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AB69_RS05870;old_locus_tag=AB69_3536 NZ_JHDO01000104.1 Protein Homology CDS 106477 107580 . - 0 ID=cds-WP_000802511.1;Parent=gene-AB69_RS05870;Dbxref=GenBank:WP_000802511.1;Name=WP_000802511.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417716.1;locus_tag=AB69_RS05870;product=rod shape-determining protein MreC;protein_id=WP_000802511.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 107646 108689 . - . ID=gene-AB69_RS05865;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AB69_RS05865;old_locus_tag=AB69_3537 NZ_JHDO01000104.1 Protein Homology CDS 107646 108689 . - 0 ID=cds-WP_000913396.1;Parent=gene-AB69_RS05865;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AB69_RS05865;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 108994 110934 . - . ID=gene-AB69_RS05860;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AB69_RS05860;old_locus_tag=AB69_3538 NZ_JHDO01000104.1 Protein Homology CDS 108994 110934 . - 0 ID=cds-WP_001241469.1;Parent=gene-AB69_RS05860;Dbxref=GenBank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AB69_RS05860;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 111086 112060 . + . ID=gene-AB69_RS05855;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AB69_RS05855;old_locus_tag=AB69_3539 NZ_JHDO01000104.1 Protein Homology CDS 111086 112060 . + 0 ID=cds-WP_001148481.1;Parent=gene-AB69_RS05855;Dbxref=GenBank:WP_001148481.1;Name=WP_001148481.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AB69_RS05855;product=MDR family oxidoreductase;protein_id=WP_001148481.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 113038 113508 . + . ID=gene-AB69_RS05845;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AB69_RS05845;old_locus_tag=AB69_3541 NZ_JHDO01000104.1 Protein Homology CDS 113038 113508 . + 0 ID=cds-WP_000354622.1;Parent=gene-AB69_RS05845;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AB69_RS05845;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 113519 114868 . + . ID=gene-AB69_RS05840;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AB69_RS05840;old_locus_tag=AB69_3542 NZ_JHDO01000104.1 Protein Homology CDS 113519 114868 . + 0 ID=cds-WP_000884639.1;Parent=gene-AB69_RS05840;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AB69_RS05840;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 114977 115219 . + . ID=gene-AB69_RS05835;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AB69_RS05835;old_locus_tag=AB69_3543 NZ_JHDO01000104.1 Protein Homology CDS 114977 115219 . + 0 ID=cds-WP_000381173.1;Parent=gene-AB69_RS05835;Dbxref=GenBank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AB69_RS05835;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 115209 116660 . + . ID=gene-AB69_RS05830;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AB69_RS05830;old_locus_tag=AB69_3544 NZ_JHDO01000104.1 Protein Homology CDS 115209 116660 . + 0 ID=cds-WP_001175728.1;Parent=gene-AB69_RS05830;Dbxref=GenBank:WP_001175728.1;Name=WP_001175728.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AB69_RS05830;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 116672 117553 . + . ID=gene-AB69_RS05825;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AB69_RS05825;old_locus_tag=AB69_3545 NZ_JHDO01000104.1 Protein Homology CDS 116672 117553 . + 0 ID=cds-WP_032231487.1;Parent=gene-AB69_RS05825;Dbxref=GenBank:WP_032231487.1;Name=WP_032231487.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AB69_RS05825;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_032231487.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 117882 118847 . + . ID=gene-AB69_RS05820;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AB69_RS05820;old_locus_tag=AB69_3546 NZ_JHDO01000104.1 Protein Homology CDS 117882 118847 . + 0 ID=cds-WP_001219652.1;Parent=gene-AB69_RS05820;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AB69_RS05820;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 118873 119169 . + . ID=gene-AB69_RS05815;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AB69_RS05815;old_locus_tag=AB69_3547 NZ_JHDO01000104.1 Protein Homology CDS 118873 119169 . + 0 ID=cds-WP_000462905.1;Parent=gene-AB69_RS05815;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AB69_RS05815;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 119255 120139 . + . ID=gene-AB69_RS05810;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AB69_RS05810;old_locus_tag=AB69_3548 NZ_JHDO01000104.1 Protein Homology CDS 119255 120139 . + 0 ID=cds-WP_001258895.1;Parent=gene-AB69_RS05810;Dbxref=GenBank:WP_001258895.1;Name=WP_001258895.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417728.4;locus_tag=AB69_RS05810;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258895.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 120223 120402 . + . ID=gene-AB69_RS0125075;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AB69_RS0125075 NZ_JHDO01000104.1 Protein Homology CDS 120223 120402 . + 0 ID=cds-WP_001295275.1;Parent=gene-AB69_RS0125075;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AB69_RS0125075;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 120405 121067 . - . ID=gene-AB69_RS05805;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AB69_RS05805;old_locus_tag=AB69_3550 NZ_JHDO01000104.1 Protein Homology CDS 120405 121067 . - 0 ID=cds-WP_001129518.1;Parent=gene-AB69_RS05805;Dbxref=GenBank:WP_001129518.1;Name=WP_001129518.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AB69_RS05805;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001129518.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 121466 122623 . + . ID=gene-AB69_RS05800;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AB69_RS05800;old_locus_tag=AB69_3551 NZ_JHDO01000104.1 Protein Homology CDS 121466 122623 . + 0 ID=cds-WP_000160334.1;Parent=gene-AB69_RS05800;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AB69_RS05800;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 122635 125739 . + . ID=gene-AB69_RS05795;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AB69_RS05795;old_locus_tag=AB69_3552 NZ_JHDO01000104.1 Protein Homology CDS 122635 125739 . + 0 ID=cds-WP_001273238.1;Parent=gene-AB69_RS05795;Dbxref=GenBank:WP_001273238.1;Name=WP_001273238.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AB69_RS05795;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_001273238.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 125992 126213 . + . ID=gene-AB69_RS05790;Name=AB69_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05790;old_locus_tag=AB69_3553 NZ_JHDO01000104.1 Protein Homology CDS 125992 126213 . + 0 ID=cds-WP_000825639.1;Parent=gene-AB69_RS05790;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AB69_RS05790;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 126644 127669 . + . ID=gene-AB69_RS05785;Name=AB69_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05785;old_locus_tag=AB69_3554 NZ_JHDO01000104.1 Protein Homology CDS 126644 127669 . + 0 ID=cds-WP_000738568.1;Parent=gene-AB69_RS05785;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AB69_RS05785;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 127737 128918 . + . ID=gene-AB69_RS05780;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AB69_RS05780;old_locus_tag=AB69_3555 NZ_JHDO01000104.1 Protein Homology CDS 127737 128918 . + 0 ID=cds-WP_000019655.1;Parent=gene-AB69_RS05780;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AB69_RS05780;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 128928 130031 . + . ID=gene-AB69_RS05775;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AB69_RS05775;old_locus_tag=AB69_3556 NZ_JHDO01000104.1 Protein Homology CDS 128928 130031 . + 0 ID=cds-WP_001300681.1;Parent=gene-AB69_RS05775;Dbxref=GenBank:WP_001300681.1;Name=WP_001300681.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AB69_RS05775;product=amino acid ABC transporter permease;protein_id=WP_001300681.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 130039 130797 . + . ID=gene-AB69_RS05770;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AB69_RS05770;old_locus_tag=AB69_3557 NZ_JHDO01000104.1 Protein Homology CDS 130039 130797 . + 0 ID=cds-WP_000078349.1;Parent=gene-AB69_RS05770;Dbxref=GenBank:WP_000078349.1;Name=WP_000078349.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AB69_RS05770;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11 NZ_JHDO01000104.1 RefSeq gene 131028 131143 . - . ID=gene-AB69_RS05765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS05765;old_locus_tag=AB69_3558 NZ_JHDO01000104.1 cmsearch rRNA 131028 131143 . - . ID=rna-AB69_RS05765;Parent=gene-AB69_RS05765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05765;product=5S ribosomal RNA NZ_JHDO01000104.1 cmsearch exon 131028 131143 . - . ID=exon-AB69_RS05765-1;Parent=rna-AB69_RS05765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05765;product=5S ribosomal RNA NZ_JHDO01000104.1 RefSeq gene 131183 131258 . - . ID=gene-AB69_RS05760;Name=AB69_RS05760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS05760;old_locus_tag=AB69_3559 NZ_JHDO01000104.1 tRNAscan-SE tRNA 131183 131258 . - . ID=rna-AB69_RS05760;Parent=gene-AB69_RS05760;anticodon=(pos:complement(131223..131225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05760;product=tRNA-Thr NZ_JHDO01000104.1 tRNAscan-SE exon 131183 131258 . - . ID=exon-AB69_RS05760-1;Parent=rna-AB69_RS05760;anticodon=(pos:complement(131223..131225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05760;product=tRNA-Thr NZ_JHDO01000104.1 RefSeq gene 131273 131388 . - . ID=gene-AB69_RS05755;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS05755;old_locus_tag=AB69_3560 NZ_JHDO01000104.1 cmsearch rRNA 131273 131388 . - . ID=rna-AB69_RS05755;Parent=gene-AB69_RS05755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05755;product=5S ribosomal RNA NZ_JHDO01000104.1 cmsearch exon 131273 131388 . - . ID=exon-AB69_RS05755-1;Parent=rna-AB69_RS05755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05755;product=5S ribosomal RNA NZ_JHDO01000104.1 RefSeq gene 131428 131503 . - . ID=gene-AB69_RS05750;Name=AB69_RS05750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS05750;old_locus_tag=AB69_3561 NZ_JHDO01000104.1 tRNAscan-SE tRNA 131428 131503 . - . ID=rna-AB69_RS05750;Parent=gene-AB69_RS05750;anticodon=(pos:complement(131468..131470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05750;product=tRNA-Thr NZ_JHDO01000104.1 tRNAscan-SE exon 131428 131503 . - . ID=exon-AB69_RS05750-1;Parent=rna-AB69_RS05750;anticodon=(pos:complement(131468..131470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05750;product=tRNA-Thr NZ_JHDO01000104.1 RefSeq gene 131518 131633 . - . ID=gene-AB69_RS05745;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS05745;old_locus_tag=AB69_3562 NZ_JHDO01000104.1 cmsearch rRNA 131518 131633 . - . ID=rna-AB69_RS05745;Parent=gene-AB69_RS05745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05745;product=5S ribosomal RNA NZ_JHDO01000104.1 cmsearch exon 131518 131633 . - . ID=exon-AB69_RS05745-1;Parent=rna-AB69_RS05745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05745;product=5S ribosomal RNA NZ_JHDO01000104.1 RefSeq gene 131728 132895 . - . ID=gene-AB69_RS05740;Name=AB69_RS05740;end_range=132895,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS05740;old_locus_tag=AB69_3563;partial=true NZ_JHDO01000104.1 cmsearch rRNA 131728 132895 . - . ID=rna-AB69_RS05740;Parent=gene-AB69_RS05740;Dbxref=RFAM:RF02541;end_range=132895,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05740;partial=true;product=23S ribosomal RNA NZ_JHDO01000104.1 cmsearch exon 131728 132895 . - . ID=exon-AB69_RS05740-1;Parent=rna-AB69_RS05740;Dbxref=RFAM:RF02541;end_range=132895,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS05740;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDO01000105.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000105.1 RefSeq region 1 526 . + . ID=NZ_JHDO01000105.1:1..526;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000105.1 RefSeq gene 1 526 . - . ID=gene-AB69_RS0125085;Name=AB69_RS0125085;end_range=526,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125085;partial=true;start_range=.,1 NZ_JHDO01000105.1 cmsearch rRNA 1 526 . - . ID=rna-AB69_RS0125085;Parent=gene-AB69_RS0125085;Dbxref=RFAM:RF02541;end_range=526,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125085;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000105.1 cmsearch exon 1 526 . - . ID=exon-AB69_RS0125085-1;Parent=rna-AB69_RS0125085;Dbxref=RFAM:RF02541;end_range=526,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125085;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JHDO01000106.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000106.1 RefSeq region 1 777 . + . ID=NZ_JHDO01000106.1:1..777;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000106.1 RefSeq gene 1 254 . + . ID=gene-AB69_RS0125090;Name=AB69_RS0125090;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125090;partial=true;start_range=.,1 NZ_JHDO01000106.1 cmsearch rRNA 1 254 . + . ID=rna-AB69_RS0125090;Parent=gene-AB69_RS0125090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125090;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000106.1 cmsearch exon 1 254 . + . ID=exon-AB69_RS0125090-1;Parent=rna-AB69_RS0125090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125090;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000106.1 RefSeq gene 323 399 . + . ID=gene-AB69_RS05735;Name=AB69_RS05735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS05735;old_locus_tag=AB69_3567 NZ_JHDO01000106.1 tRNAscan-SE tRNA 323 399 . + . ID=rna-AB69_RS05735;Parent=gene-AB69_RS05735;anticodon=(pos:357..359);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05735;product=tRNA-Ile NZ_JHDO01000106.1 tRNAscan-SE exon 323 399 . + . ID=exon-AB69_RS05735-1;Parent=rna-AB69_RS05735;anticodon=(pos:357..359);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05735;product=tRNA-Ile NZ_JHDO01000106.1 RefSeq gene 442 517 . + . ID=gene-AB69_RS05730;Name=AB69_RS05730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS05730;old_locus_tag=AB69_3568 NZ_JHDO01000106.1 tRNAscan-SE tRNA 442 517 . + . ID=rna-AB69_RS05730;Parent=gene-AB69_RS05730;anticodon=(pos:475..477);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05730;product=tRNA-Ala NZ_JHDO01000106.1 tRNAscan-SE exon 442 517 . + . ID=exon-AB69_RS05730-1;Parent=rna-AB69_RS05730;anticodon=(pos:475..477);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS05730;product=tRNA-Ala NZ_JHDO01000106.1 RefSeq gene 692 777 . + . ID=gene-AB69_RS0125095;Name=AB69_RS0125095;end_range=777,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125095;partial=true NZ_JHDO01000106.1 cmsearch rRNA 692 777 . + . ID=rna-AB69_RS0125095;Parent=gene-AB69_RS0125095;Dbxref=RFAM:RF02541;end_range=777,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125095;partial=true;product=23S ribosomal RNA NZ_JHDO01000106.1 cmsearch exon 692 777 . + . ID=exon-AB69_RS0125095-1;Parent=rna-AB69_RS0125095;Dbxref=RFAM:RF02541;end_range=777,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125095;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDO01000107.1 1 5502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000107.1 RefSeq region 1 5502 . + . ID=NZ_JHDO01000107.1:1..5502;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000107.1 RefSeq pseudogene 1 366 . - . ID=gene-AB69_RS05725;Name=AB69_RS05725;end_range=366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS05725;old_locus_tag=AB69_3569;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000107.1 Protein Homology CDS 1 366 . - 0 ID=cds-AB69_RS05725;Parent=gene-AB69_RS05725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=366,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858194.1;locus_tag=AB69_RS05725;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 834 1208 . - . ID=gene-AB69_RS0125100;Name=eltB;gbkey=Gene;gene=eltB;gene_biotype=protein_coding;locus_tag=AB69_RS0125100 NZ_JHDO01000107.1 Protein Homology CDS 834 1208 . - 0 ID=cds-WP_024180933.1;Parent=gene-AB69_RS0125100;Dbxref=GenBank:WP_024180933.1;Name=WP_024180933.1;gbkey=CDS;gene=eltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012846869.1;locus_tag=AB69_RS0125100;product=heat-labile enterotoxin LT subunit B;protein_id=WP_024180933.1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 1205 1981 . - . ID=gene-AB69_RS05720;Name=eltA;gbkey=Gene;gene=eltA;gene_biotype=protein_coding;locus_tag=AB69_RS05720;old_locus_tag=AB69_3571 NZ_JHDO01000107.1 Protein Homology CDS 1205 1981 . - 0 ID=cds-WP_001398470.1;Parent=gene-AB69_RS05720;Dbxref=GenBank:WP_001398470.1;Name=WP_001398470.1;gbkey=CDS;gene=eltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001426678.1;locus_tag=AB69_RS05720;product=heat-labile enterotoxin LT subunit A;protein_id=WP_001398470.1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 2297 2569 . + . ID=gene-AB69_RS05715;Name=AB69_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05715;old_locus_tag=AB69_3574 NZ_JHDO01000107.1 Protein Homology CDS 2297 2569 . + 0 ID=cds-WP_000019162.1;Parent=gene-AB69_RS05715;Dbxref=GenBank:WP_000019162.1;Name=WP_000019162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_145811.1;locus_tag=AB69_RS05715;product=hypothetical protein;protein_id=WP_000019162.1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 2789 3976 . - . ID=gene-AB69_RS05710;Name=AB69_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05710;old_locus_tag=AB69_3575 NZ_JHDO01000107.1 Protein Homology CDS 2789 3976 . - 0 ID=cds-WP_001398473.1;Parent=gene-AB69_RS05710;Dbxref=GenBank:WP_001398473.1;Name=WP_001398473.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AB69_RS05710;product=IS91 family transposase;protein_id=WP_001398473.1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 3983 4279 . - . ID=gene-AB69_RS05705;Name=AB69_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05705;old_locus_tag=AB69_3576 NZ_JHDO01000107.1 GeneMarkS-2+ CDS 3983 4279 . - 0 ID=cds-WP_001438599.1;Parent=gene-AB69_RS05705;Dbxref=GenBank:WP_001438599.1;Name=WP_001438599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS05705;product=hypothetical protein;protein_id=WP_001438599.1;transl_table=11 NZ_JHDO01000107.1 RefSeq gene 4876 5385 . + . ID=gene-AB69_RS05700;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AB69_RS05700;old_locus_tag=AB69_3577 NZ_JHDO01000107.1 Protein Homology CDS 4876 5385 . + 0 ID=cds-WP_000115001.1;Parent=gene-AB69_RS05700;Dbxref=GenBank:WP_000115001.1;Name=WP_000115001.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AB69_RS05700;product=peptide deformylase;protein_id=WP_000115001.1;transl_table=11 NZ_JHDO01000107.1 RefSeq pseudogene 5400 5502 . + . ID=gene-AB69_RS27685;Name=fmt;end_range=5502,.;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=AB69_RS27685;old_locus_tag=AB69_3579;partial=true;pseudo=true NZ_JHDO01000107.1 Protein Homology CDS 5400 5502 . + 0 ID=cds-AB69_RS27685;Parent=gene-AB69_RS27685;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5502,.;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=AB69_RS27685;partial=true;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000108.1 1 166647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000108.1 RefSeq region 1 166647 . + . ID=NZ_JHDO01000108.1:1..166647;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000108.1 RefSeq gene 1 947 . - . ID=gene-AB69_RS0125105;Name=AB69_RS0125105;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125105;partial=true;start_range=.,1 NZ_JHDO01000108.1 cmsearch rRNA 1 947 . - . ID=rna-AB69_RS0125105;Parent=gene-AB69_RS0125105;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125105;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000108.1 cmsearch exon 1 947 . - . ID=exon-AB69_RS0125105-1;Parent=rna-AB69_RS0125105;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125105;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDO01000108.1 RefSeq gene 1562 3151 . + . ID=gene-AB69_RS05695;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AB69_RS05695;old_locus_tag=AB69_3581 NZ_JHDO01000108.1 Protein Homology CDS 1562 3151 . + 0 ID=cds-WP_001187559.1;Parent=gene-AB69_RS05695;Dbxref=GenBank:WP_001187559.1;Name=WP_001187559.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AB69_RS05695;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187559.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 3163 4452 . + . ID=gene-AB69_RS05690;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AB69_RS05690;old_locus_tag=AB69_3582 NZ_JHDO01000108.1 Protein Homology CDS 3163 4452 . + 0 ID=cds-WP_000866800.1;Parent=gene-AB69_RS05690;Dbxref=GenBank:WP_000866800.1;Name=WP_000866800.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AB69_RS05690;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866800.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 4449 5774 . - . ID=gene-AB69_RS05685;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AB69_RS05685;old_locus_tag=AB69_3583 NZ_JHDO01000108.1 Protein Homology CDS 4449 5774 . - 0 ID=cds-WP_032231590.1;Parent=gene-AB69_RS05685;Dbxref=GenBank:WP_032231590.1;Name=WP_032231590.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AB69_RS05685;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_032231590.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 5771 7168 . - . ID=gene-AB69_RS05680;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AB69_RS05680;old_locus_tag=AB69_3584 NZ_JHDO01000108.1 Protein Homology CDS 5771 7168 . - 0 ID=cds-WP_001211892.1;Parent=gene-AB69_RS05680;Dbxref=GenBank:WP_001211892.1;Name=WP_001211892.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418431.1;locus_tag=AB69_RS05680;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211892.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 7406 7831 . + . ID=gene-AB69_RS05675;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AB69_RS05675;old_locus_tag=AB69_3586 NZ_JHDO01000108.1 Protein Homology CDS 7406 7831 . + 0 ID=cds-WP_000828222.1;Parent=gene-AB69_RS05675;Dbxref=GenBank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AB69_RS05675;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 7833 8528 . - . ID=gene-AB69_RS05670;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AB69_RS05670;old_locus_tag=AB69_3587 NZ_JHDO01000108.1 Protein Homology CDS 7833 8528 . - 0 ID=cds-WP_001084037.1;Parent=gene-AB69_RS05670;Dbxref=GenBank:WP_001084037.1;Name=WP_001084037.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418429.1;locus_tag=AB69_RS05670;product=DUF1481 domain-containing protein;protein_id=WP_001084037.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 8541 8813 . - . ID=gene-AB69_RS05665;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AB69_RS05665;old_locus_tag=AB69_3588 NZ_JHDO01000108.1 Protein Homology CDS 8541 8813 . - 0 ID=cds-WP_001044513.1;Parent=gene-AB69_RS05665;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AB69_RS05665;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 9000 9590 . - . ID=gene-AB69_RS05660;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AB69_RS05660;old_locus_tag=AB69_3589 NZ_JHDO01000108.1 Protein Homology CDS 9000 9590 . - 0 ID=cds-WP_000940106.1;Parent=gene-AB69_RS05660;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AB69_RS05660;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 9633 10304 . - . ID=gene-AB69_RS05655;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AB69_RS05655;old_locus_tag=AB69_3590 NZ_JHDO01000108.1 Protein Homology CDS 9633 10304 . - 0 ID=cds-WP_000362388.1;Parent=gene-AB69_RS05655;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AB69_RS05655;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 10314 11378 . - . ID=gene-AB69_RS05650;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AB69_RS05650;old_locus_tag=AB69_3591 NZ_JHDO01000108.1 Protein Homology CDS 10314 11378 . - 0 ID=cds-WP_000137657.1;Parent=gene-AB69_RS05650;Dbxref=GenBank:WP_000137657.1;Name=WP_000137657.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AB69_RS05650;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 11418 12191 . - . ID=gene-AB69_RS05645;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AB69_RS05645;old_locus_tag=AB69_3592 NZ_JHDO01000108.1 Protein Homology CDS 11418 12191 . - 0 ID=cds-WP_000373940.1;Parent=gene-AB69_RS05645;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AB69_RS05645;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 12286 12762 . + . ID=gene-AB69_RS05640;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AB69_RS05640;old_locus_tag=AB69_3593 NZ_JHDO01000108.1 Protein Homology CDS 12286 12762 . + 0 ID=cds-WP_000934302.1;Parent=gene-AB69_RS05640;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AB69_RS05640;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JHDO01000108.1 cmsearch riboswitch 12814 12914 . + . ID=id-NZ_JHDO01000108.1:12814..12914;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000108.1 RefSeq gene 12995 14890 . + . ID=gene-AB69_RS05635;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AB69_RS05635;old_locus_tag=AB69_3594 NZ_JHDO01000108.1 Protein Homology CDS 12995 14890 . + 0 ID=cds-WP_001276926.1;Parent=gene-AB69_RS05635;Dbxref=GenBank:WP_001276926.1;Name=WP_001276926.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=AB69_RS05635;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001276926.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 14890 15525 . + . ID=gene-AB69_RS05630;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AB69_RS05630;old_locus_tag=AB69_3595 NZ_JHDO01000108.1 Protein Homology CDS 14890 15525 . + 0 ID=cds-WP_000284615.1;Parent=gene-AB69_RS05630;Dbxref=GenBank:WP_000284615.1;Name=WP_000284615.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418421.1;locus_tag=AB69_RS05630;product=thiamine phosphate synthase;protein_id=WP_000284615.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 15518 16273 . + . ID=gene-AB69_RS05625;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AB69_RS05625;old_locus_tag=AB69_3596 NZ_JHDO01000108.1 Protein Homology CDS 15518 16273 . + 0 ID=cds-WP_000999737.1;Parent=gene-AB69_RS05625;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AB69_RS05625;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 16257 16457 . + . ID=gene-AB69_RS05620;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AB69_RS05620;old_locus_tag=AB69_3597 NZ_JHDO01000108.1 Protein Homology CDS 16257 16457 . + 0 ID=cds-WP_001166226.1;Parent=gene-AB69_RS05620;Dbxref=GenBank:WP_001166226.1;Name=WP_001166226.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AB69_RS05620;product=sulfur carrier protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 16459 17229 . + . ID=gene-AB69_RS05615;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AB69_RS05615;old_locus_tag=AB69_3598 NZ_JHDO01000108.1 Protein Homology CDS 16459 17229 . + 0 ID=cds-WP_000944104.1;Parent=gene-AB69_RS05615;Dbxref=GenBank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AB69_RS05615;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 17226 18359 . + . ID=gene-AB69_RS05610;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AB69_RS05610;old_locus_tag=AB69_3599 NZ_JHDO01000108.1 Protein Homology CDS 17226 18359 . + 0 ID=cds-WP_000847447.1;Parent=gene-AB69_RS05610;Dbxref=GenBank:WP_000847447.1;Name=WP_000847447.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AB69_RS05610;product=2-iminoacetate synthase ThiH;protein_id=WP_000847447.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 18769 19308 . - . ID=gene-AB69_RS05605;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AB69_RS05605;old_locus_tag=AB69_3600 NZ_JHDO01000108.1 Protein Homology CDS 18769 19308 . - 0 ID=cds-WP_001307500.1;Parent=gene-AB69_RS05605;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AB69_RS05605;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 19520 23743 . - . ID=gene-AB69_RS05600;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AB69_RS05600;old_locus_tag=AB69_3601 NZ_JHDO01000108.1 Protein Homology CDS 19520 23743 . - 0 ID=cds-WP_000653944.1;Parent=gene-AB69_RS05600;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AB69_RS05600;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 23820 27848 . - . ID=gene-AB69_RS05595;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AB69_RS05595;old_locus_tag=AB69_3602 NZ_JHDO01000108.1 Protein Homology CDS 23820 27848 . - 0 ID=cds-WP_000263098.1;Parent=gene-AB69_RS05595;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AB69_RS05595;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 28168 28533 . - . ID=gene-AB69_RS05590;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AB69_RS05590;old_locus_tag=AB69_3603 NZ_JHDO01000108.1 Protein Homology CDS 28168 28533 . - 0 ID=cds-WP_000028878.1;Parent=gene-AB69_RS05590;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AB69_RS05590;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 28600 29097 . - . ID=gene-AB69_RS05585;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AB69_RS05585;old_locus_tag=AB69_3604 NZ_JHDO01000108.1 Protein Homology CDS 28600 29097 . - 0 ID=cds-WP_001207201.1;Parent=gene-AB69_RS05585;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AB69_RS05585;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 29510 30214 . - . ID=gene-AB69_RS05580;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AB69_RS05580;old_locus_tag=AB69_3605 NZ_JHDO01000108.1 Protein Homology CDS 29510 30214 . - 0 ID=cds-WP_001096684.1;Parent=gene-AB69_RS05580;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AB69_RS05580;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 30218 30646 . - . ID=gene-AB69_RS05575;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AB69_RS05575;old_locus_tag=AB69_3606 NZ_JHDO01000108.1 Protein Homology CDS 30218 30646 . - 0 ID=cds-WP_001085926.1;Parent=gene-AB69_RS05575;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AB69_RS05575;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 30805 31350 . - . ID=gene-AB69_RS05570;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AB69_RS05570;old_locus_tag=AB69_3607 NZ_JHDO01000108.1 Protein Homology CDS 30805 31350 . - 0 ID=cds-WP_001287516.1;Parent=gene-AB69_RS05570;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AB69_RS05570;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 31352 31735 . - . ID=gene-AB69_RS05565;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AB69_RS05565;old_locus_tag=AB69_3608 NZ_JHDO01000108.1 Protein Homology CDS 31352 31735 . - 0 ID=cds-WP_001275702.1;Parent=gene-AB69_RS05565;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AB69_RS05565;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 31965 33149 . - . ID=gene-AB69_RS05560;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AB69_RS05560;old_locus_tag=AB69_3609 NZ_JHDO01000108.1 Protein Homology CDS 31965 33149 . - 0 ID=cds-WP_000031784.1;Parent=gene-AB69_RS05560;Dbxref=GenBank:WP_000031784.1;Name=WP_000031784.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AB69_RS05560;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 33220 35334 . - . ID=gene-AB69_RS05555;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AB69_RS05555;old_locus_tag=AB69_3610 NZ_JHDO01000108.1 Protein Homology CDS 33220 35334 . - 0 ID=cds-WP_000124700.1;Parent=gene-AB69_RS05555;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AB69_RS05555;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 35431 35901 . - . ID=gene-AB69_RS05550;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AB69_RS05550;old_locus_tag=AB69_3611 NZ_JHDO01000108.1 Protein Homology CDS 35431 35901 . - 0 ID=cds-WP_001138043.1;Parent=gene-AB69_RS05550;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AB69_RS05550;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 35998 36372 . - . ID=gene-AB69_RS05545;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AB69_RS05545;old_locus_tag=AB69_3612 NZ_JHDO01000108.1 Protein Homology CDS 35998 36372 . - 0 ID=cds-WP_000246815.1;Parent=gene-AB69_RS05545;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AB69_RS05545;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 36498 36785 . - . ID=gene-AB69_RS05540;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AB69_RS05540;old_locus_tag=AB69_3613 NZ_JHDO01000108.1 Protein Homology CDS 36498 36785 . - 0 ID=cds-WP_000903373.1;Parent=gene-AB69_RS05540;Dbxref=GenBank:WP_000903373.1;Name=WP_000903373.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AB69_RS05540;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903373.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 36793 37152 . - . ID=gene-AB69_RS05535;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AB69_RS05535;old_locus_tag=AB69_3614 NZ_JHDO01000108.1 Protein Homology CDS 36793 37152 . - 0 ID=cds-WP_000820714.1;Parent=gene-AB69_RS05535;Dbxref=GenBank:WP_000820714.1;Name=WP_000820714.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AB69_RS05535;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820714.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 37152 37538 . - . ID=gene-AB69_RS05530;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AB69_RS05530;old_locus_tag=AB69_3615 NZ_JHDO01000108.1 Protein Homology CDS 37152 37538 . - 0 ID=cds-WP_001209680.1;Parent=gene-AB69_RS05530;Dbxref=GenBank:WP_001209680.1;Name=WP_001209680.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AB69_RS05530;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209680.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 37538 38260 . - . ID=gene-AB69_RS05525;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AB69_RS05525;old_locus_tag=AB69_3616 NZ_JHDO01000108.1 Protein Homology CDS 37538 38260 . - 0 ID=cds-WP_000091466.1;Parent=gene-AB69_RS05525;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AB69_RS05525;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 38427 39239 . - . ID=gene-AB69_RS05520;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AB69_RS05520;old_locus_tag=AB69_3617 NZ_JHDO01000108.1 Protein Homology CDS 38427 39239 . - 0 ID=cds-WP_000838250.1;Parent=gene-AB69_RS05520;Dbxref=GenBank:WP_000838250.1;Name=WP_000838250.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417806.1;locus_tag=AB69_RS05520;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838250.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 39460 39678 . + . ID=gene-AB69_RS05515;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AB69_RS05515;old_locus_tag=AB69_3618 NZ_JHDO01000108.1 Protein Homology CDS 39460 39678 . + 0 ID=cds-WP_001153615.1;Parent=gene-AB69_RS05515;Dbxref=GenBank:WP_001153615.1;Name=WP_001153615.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AB69_RS05515;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 39727 40317 . - . ID=gene-AB69_RS05510;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AB69_RS05510;old_locus_tag=AB69_3619 NZ_JHDO01000108.1 Protein Homology CDS 39727 40317 . - 0 ID=cds-WP_000861334.1;Parent=gene-AB69_RS05510;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AB69_RS05510;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 40412 40612 . - . ID=gene-AB69_RS05505;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AB69_RS05505;old_locus_tag=AB69_3620 NZ_JHDO01000108.1 Protein Homology CDS 40412 40612 . - 0 ID=cds-WP_001007730.1;Parent=gene-AB69_RS05505;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AB69_RS05505;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 40622 42427 . - . ID=gene-AB69_RS05500;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AB69_RS05500;old_locus_tag=AB69_3621 NZ_JHDO01000108.1 Protein Homology CDS 40622 42427 . - 0 ID=cds-WP_032231494.1;Parent=gene-AB69_RS05500;Dbxref=GenBank:WP_032231494.1;Name=WP_032231494.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AB69_RS05500;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_032231494.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 42427 42978 . - . ID=gene-AB69_RS05495;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AB69_RS05495;old_locus_tag=AB69_3622 NZ_JHDO01000108.1 Protein Homology CDS 42427 42978 . - 0 ID=cds-WP_001297514.1;Parent=gene-AB69_RS05495;Dbxref=GenBank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AB69_RS05495;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 43109 45022 . + . ID=gene-AB69_RS05490;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AB69_RS05490;old_locus_tag=AB69_3623 NZ_JHDO01000108.1 Protein Homology CDS 43109 45022 . + 0 ID=cds-WP_000634798.1;Parent=gene-AB69_RS05490;Dbxref=GenBank:WP_000634798.1;Name=WP_000634798.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AB69_RS05490;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 45022 46044 . + . ID=gene-AB69_RS05485;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AB69_RS05485;old_locus_tag=AB69_3624 NZ_JHDO01000108.1 Protein Homology CDS 45022 46044 . + 0 ID=cds-WP_000057356.1;Parent=gene-AB69_RS05485;Dbxref=GenBank:WP_000057356.1;Name=WP_000057356.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417812.1;locus_tag=AB69_RS05485;product=hydrolase;protein_id=WP_000057356.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 46038 46256 . + . ID=gene-AB69_RS05480;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AB69_RS05480;old_locus_tag=AB69_3625 NZ_JHDO01000108.1 Protein Homology CDS 46038 46256 . + 0 ID=cds-WP_000907085.1;Parent=gene-AB69_RS05480;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AB69_RS05480;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 46310 47179 . + . ID=gene-AB69_RS05475;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AB69_RS05475;old_locus_tag=AB69_3626 NZ_JHDO01000108.1 Protein Homology CDS 46310 47179 . + 0 ID=cds-WP_001274680.1;Parent=gene-AB69_RS05475;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AB69_RS05475;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 47234 47638 . - . ID=gene-AB69_RS05470;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AB69_RS05470;old_locus_tag=AB69_3627 NZ_JHDO01000108.1 Protein Homology CDS 47234 47638 . - 0 ID=cds-WP_001148908.1;Parent=gene-AB69_RS05470;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AB69_RS05470;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 47940 48572 . + . ID=gene-AB69_RS05465;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AB69_RS05465;old_locus_tag=AB69_3628 NZ_JHDO01000108.1 Protein Homology CDS 47940 48572 . + 0 ID=cds-WP_000242755.1;Parent=gene-AB69_RS05465;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AB69_RS05465;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 48623 50713 . + . ID=gene-AB69_RS05460;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AB69_RS05460;old_locus_tag=AB69_3629 NZ_JHDO01000108.1 Protein Homology CDS 48623 50713 . + 0 ID=cds-WP_001295162.1;Parent=gene-AB69_RS05460;Dbxref=GenBank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AB69_RS05460;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 50780 52000 . - . ID=gene-AB69_RS05455;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AB69_RS05455;old_locus_tag=AB69_3630 NZ_JHDO01000108.1 Protein Homology CDS 50780 52000 . - 0 ID=cds-WP_000963792.1;Parent=gene-AB69_RS05455;Dbxref=GenBank:WP_000963792.1;Name=WP_000963792.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AB69_RS05455;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963792.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 52086 52649 . - . ID=gene-AB69_RS05450;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AB69_RS05450;old_locus_tag=AB69_3631 NZ_JHDO01000108.1 Protein Homology CDS 52086 52649 . - 0 ID=cds-WP_032231495.1;Parent=gene-AB69_RS05450;Dbxref=GenBank:WP_032231495.1;Name=WP_032231495.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AB69_RS05450;product=aminodeoxychorismate synthase component 2;protein_id=WP_032231495.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 52681 53283 . - . ID=gene-AB69_RS05445;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AB69_RS05445;old_locus_tag=AB69_3632 NZ_JHDO01000108.1 Protein Homology CDS 52681 53283 . - 0 ID=cds-WP_001280641.1;Parent=gene-AB69_RS05445;Dbxref=GenBank:WP_001280641.1;Name=WP_001280641.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AB69_RS05445;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280641.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 53273 53440 . - . ID=gene-AB69_RS0125115;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AB69_RS0125115 NZ_JHDO01000108.1 Protein Homology CDS 53273 53440 . - 0 ID=cds-WP_000736862.1;Parent=gene-AB69_RS0125115;Dbxref=GenBank:WP_000736862.1;Name=WP_000736862.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312240.1;locus_tag=AB69_RS0125115;product=YhfG family protein;protein_id=WP_000736862.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 53545 54117 . - . ID=gene-AB69_RS05440;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AB69_RS05440;old_locus_tag=AB69_3633 NZ_JHDO01000108.1 Protein Homology CDS 53545 54117 . - 0 ID=cds-WP_000477225.1;Parent=gene-AB69_RS05440;Dbxref=GenBank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AB69_RS05440;product=peptidylprolyl isomerase A;protein_id=WP_000477225.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 54388 55569 . + . ID=gene-AB69_RS05435;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AB69_RS05435;old_locus_tag=AB69_3635 NZ_JHDO01000108.1 Protein Homology CDS 54388 55569 . + 0 ID=cds-WP_000185247.1;Parent=gene-AB69_RS05435;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AB69_RS05435;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 55831 58374 . + . ID=gene-AB69_RS05430;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AB69_RS05430;old_locus_tag=AB69_3636 NZ_JHDO01000108.1 Protein Homology CDS 55831 58374 . + 0 ID=cds-WP_000049208.1;Parent=gene-AB69_RS05430;Dbxref=GenBank:WP_000049208.1;Name=WP_000049208.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417824.1;locus_tag=AB69_RS05430;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049208.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 58371 58697 . + . ID=gene-AB69_RS05425;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AB69_RS05425;old_locus_tag=AB69_3637 NZ_JHDO01000108.1 Protein Homology CDS 58371 58697 . + 0 ID=cds-WP_000084764.1;Parent=gene-AB69_RS05425;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AB69_RS05425;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 58823 59629 . + . ID=gene-AB69_RS05420;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AB69_RS05420;old_locus_tag=AB69_3638 NZ_JHDO01000108.1 Protein Homology CDS 58823 59629 . + 0 ID=cds-WP_000493556.1;Parent=gene-AB69_RS05420;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AB69_RS05420;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 59648 61021 . + . ID=gene-AB69_RS05415;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AB69_RS05415;old_locus_tag=AB69_3639 NZ_JHDO01000108.1 Protein Homology CDS 59648 61021 . + 0 ID=cds-WP_000349855.1;Parent=gene-AB69_RS05415;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AB69_RS05415;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 61268 61435 . + . ID=gene-AB69_RS05410;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AB69_RS05410;old_locus_tag=AB69_3640 NZ_JHDO01000108.1 Protein Homology CDS 61268 61435 . + 0 ID=cds-WP_001031834.1;Parent=gene-AB69_RS05410;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AB69_RS05410;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 61730 63067 . + . ID=gene-AB69_RS05405;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AB69_RS05405;old_locus_tag=AB69_3641 NZ_JHDO01000108.1 Protein Homology CDS 61730 63067 . + 0 ID=cds-WP_000535505.1;Parent=gene-AB69_RS05405;Dbxref=GenBank:WP_000535505.1;Name=WP_000535505.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AB69_RS05405;product=fructoselysine/psicoselysine transporter;protein_id=WP_000535505.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 63088 64110 . + . ID=gene-AB69_RS05400;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AB69_RS05400;old_locus_tag=AB69_3642 NZ_JHDO01000108.1 Protein Homology CDS 63088 64110 . + 0 ID=cds-WP_001295163.1;Parent=gene-AB69_RS05400;Dbxref=GenBank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AB69_RS05400;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 64160 64990 . + . ID=gene-AB69_RS05395;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AB69_RS05395;old_locus_tag=AB69_3643 NZ_JHDO01000108.1 Protein Homology CDS 64160 64990 . + 0 ID=cds-WP_000847837.1;Parent=gene-AB69_RS05395;Dbxref=GenBank:WP_000847837.1;Name=WP_000847837.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AB69_RS05395;product=fructoselysine 3-epimerase;protein_id=WP_000847837.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 64987 65772 . + . ID=gene-AB69_RS05390;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AB69_RS05390;old_locus_tag=AB69_3644 NZ_JHDO01000108.1 Protein Homology CDS 64987 65772 . + 0 ID=cds-WP_000853353.1;Parent=gene-AB69_RS05390;Dbxref=GenBank:WP_000853353.1;Name=WP_000853353.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417833.1;locus_tag=AB69_RS05390;product=fructoselysine 6-kinase;protein_id=WP_000853353.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 65872 66603 . + . ID=gene-AB69_RS05385;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AB69_RS05385;old_locus_tag=AB69_3645 NZ_JHDO01000108.1 Protein Homology CDS 65872 66603 . + 0 ID=cds-WP_001276847.1;Parent=gene-AB69_RS05385;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AB69_RS05385;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 66755 67840 . - . ID=gene-AB69_RS05380;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AB69_RS05380;old_locus_tag=AB69_3646 NZ_JHDO01000108.1 Protein Homology CDS 66755 67840 . - 0 ID=cds-WP_000847144.1;Parent=gene-AB69_RS05380;Dbxref=GenBank:WP_000847144.1;Name=WP_000847144.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AB69_RS05380;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847144.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 67852 69156 . - . ID=gene-AB69_RS05375;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AB69_RS05375;old_locus_tag=AB69_3647 NZ_JHDO01000108.1 Protein Homology CDS 67852 69156 . - 0 ID=cds-WP_001560029.1;Parent=gene-AB69_RS05375;Dbxref=GenBank:WP_001560029.1;Name=WP_001560029.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417836.1;locus_tag=AB69_RS05375;product=YhfT family protein;protein_id=WP_001560029.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 69168 69521 . - . ID=gene-AB69_RS05370;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AB69_RS05370;old_locus_tag=AB69_3648 NZ_JHDO01000108.1 Protein Homology CDS 69168 69521 . - 0 ID=cds-WP_000719728.1;Parent=gene-AB69_RS05370;Dbxref=GenBank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AB69_RS05370;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 69532 70410 . - . ID=gene-AB69_RS05365;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AB69_RS05365;old_locus_tag=AB69_3649 NZ_JHDO01000108.1 Protein Homology CDS 69532 70410 . - 0 ID=cds-WP_000007010.1;Parent=gene-AB69_RS05365;Dbxref=GenBank:WP_000007010.1;Name=WP_000007010.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AB69_RS05365;product=phosphotriesterase-related protein;protein_id=WP_000007010.1;transl_table=11 NZ_JHDO01000108.1 RefSeq pseudogene 70407 71629 . - . ID=gene-AB69_RS0125120;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=pseudogene;locus_tag=AB69_RS0125120;pseudo=true NZ_JHDO01000108.1 Protein Homology CDS 70407 71629 . - 0 ID=cds-AB69_RS0125120;Parent=gene-AB69_RS0125120;Note=frameshifted;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AB69_RS0125120;product=phosphopentomutase;pseudo=true;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 71629 72792 . - . ID=gene-AB69_RS05360;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AB69_RS05360;old_locus_tag=AB69_3652 NZ_JHDO01000108.1 Protein Homology CDS 71629 72792 . - 0 ID=cds-WP_000497334.1;Parent=gene-AB69_RS05360;Dbxref=GenBank:WP_000497334.1;Name=WP_000497334.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417840.1;locus_tag=AB69_RS05360;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497334.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 72876 73238 . - . ID=gene-AB69_RS05355;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AB69_RS05355;old_locus_tag=AB69_3653 NZ_JHDO01000108.1 Protein Homology CDS 72876 73238 . - 0 ID=cds-WP_001295165.1;Parent=gene-AB69_RS05355;Dbxref=GenBank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AB69_RS05355;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 73255 74160 . - . ID=gene-AB69_RS05350;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AB69_RS05350;old_locus_tag=AB69_3654 NZ_JHDO01000108.1 Protein Homology CDS 73255 74160 . - 0 ID=cds-WP_001254790.1;Parent=gene-AB69_RS05350;Dbxref=GenBank:WP_001254790.1;Name=WP_001254790.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AB69_RS05350;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254790.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 74450 75454 . - . ID=gene-AB69_RS05345;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AB69_RS05345;old_locus_tag=AB69_3656 NZ_JHDO01000108.1 Protein Homology CDS 74450 75454 . - 0 ID=cds-WP_000165552.1;Parent=gene-AB69_RS05345;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AB69_RS05345;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 75447 76205 . - . ID=gene-AB69_RS05340;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AB69_RS05340;old_locus_tag=AB69_3657 NZ_JHDO01000108.1 Protein Homology CDS 75447 76205 . - 0 ID=cds-WP_001031729.1;Parent=gene-AB69_RS05340;Dbxref=GenBank:WP_001031729.1;Name=WP_001031729.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417844.1;locus_tag=AB69_RS05340;product=phosphoglycolate phosphatase;protein_id=WP_001031729.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 76198 76875 . - . ID=gene-AB69_RS05335;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AB69_RS05335;old_locus_tag=AB69_3658 NZ_JHDO01000108.1 Protein Homology CDS 76198 76875 . - 0 ID=cds-WP_000816280.1;Parent=gene-AB69_RS05335;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AB69_RS05335;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 76893 77729 . - . ID=gene-AB69_RS05330;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AB69_RS05330;old_locus_tag=AB69_3659 NZ_JHDO01000108.1 Protein Homology CDS 76893 77729 . - 0 ID=cds-WP_000742143.1;Parent=gene-AB69_RS05330;Dbxref=GenBank:WP_000742143.1;Name=WP_000742143.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AB69_RS05330;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742143.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 77836 79122 . - . ID=gene-AB69_RS05325;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AB69_RS05325;old_locus_tag=AB69_3660 NZ_JHDO01000108.1 Protein Homology CDS 77836 79122 . - 0 ID=cds-WP_000343215.1;Parent=gene-AB69_RS05325;Dbxref=GenBank:WP_000343215.1;Name=WP_000343215.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417847.1;locus_tag=AB69_RS05325;product=cell division protein DamX;protein_id=WP_000343215.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 79214 80302 . - . ID=gene-AB69_RS05320;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AB69_RS05320;old_locus_tag=AB69_3661 NZ_JHDO01000108.1 Protein Homology CDS 79214 80302 . - 0 ID=cds-WP_000439848.1;Parent=gene-AB69_RS05320;Dbxref=GenBank:WP_000439848.1;Name=WP_000439848.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AB69_RS05320;product=3-dehydroquinate synthase;protein_id=WP_000439848.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 80359 80880 . - . ID=gene-AB69_RS05315;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AB69_RS05315;old_locus_tag=AB69_3662 NZ_JHDO01000108.1 Protein Homology CDS 80359 80880 . - 0 ID=cds-WP_000818618.1;Parent=gene-AB69_RS05315;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AB69_RS05315;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JHDO01000108.1 RefSeq pseudogene 81281 82519 . - . ID=gene-AB69_RS05310;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=AB69_RS05310;old_locus_tag=AB69_3663;pseudo=true NZ_JHDO01000108.1 Protein Homology CDS 81281 82519 . - 0 ID=cds-AB69_RS05310;Parent=gene-AB69_RS05310;Note=internal stop;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AB69_RS05310;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 NZ_JHDO01000108.1 RefSeq pseudogene 82494 82871 . - . ID=gene-AB69_RS05305;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=pseudogene;locus_tag=AB69_RS05305;old_locus_tag=AB69_3664;partial=true;pseudo=true;start_range=.,82494 NZ_JHDO01000108.1 Protein Homology CDS 82494 82871 . - 0 ID=cds-AB69_RS05305;Parent=gene-AB69_RS05305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=hofP;inference=COORDINATES: protein motif:HMM:NF022208.6;locus_tag=AB69_RS05305;partial=true;product=DNA utilization protein HofP;pseudo=true;start_range=.,82494;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 82825 83265 . - . ID=gene-AB69_RS05300;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AB69_RS05300;old_locus_tag=AB69_3665 NZ_JHDO01000108.1 Protein Homology CDS 82825 83265 . - 0 ID=cds-WP_001055760.1;Parent=gene-AB69_RS05300;Dbxref=GenBank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AB69_RS05300;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 83249 83788 . - . ID=gene-AB69_RS05295;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AB69_RS05295;old_locus_tag=AB69_3666 NZ_JHDO01000108.1 Protein Homology CDS 83249 83788 . - 0 ID=cds-WP_001069315.1;Parent=gene-AB69_RS05295;Dbxref=GenBank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AB69_RS05295;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 83788 84567 . - . ID=gene-AB69_RS05290;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AB69_RS05290;old_locus_tag=AB69_3667 NZ_JHDO01000108.1 Protein Homology CDS 83788 84567 . - 0 ID=cds-WP_001295166.1;Parent=gene-AB69_RS05290;Dbxref=GenBank:WP_001295166.1;Name=WP_001295166.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AB69_RS05290;product=DNA utilization protein HofM;protein_id=WP_001295166.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 84687 87239 . + . ID=gene-AB69_RS05285;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AB69_RS05285;old_locus_tag=AB69_3668 NZ_JHDO01000108.1 Protein Homology CDS 84687 87239 . + 0 ID=cds-WP_001336003.1;Parent=gene-AB69_RS05285;Dbxref=GenBank:WP_001336003.1;Name=WP_001336003.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417855.4;locus_tag=AB69_RS05285;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001336003.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 87405 87965 . - . ID=gene-AB69_RS05280;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AB69_RS05280;old_locus_tag=AB69_3669 NZ_JHDO01000108.1 Protein Homology CDS 87405 87965 . - 0 ID=cds-WP_032231498.1;Parent=gene-AB69_RS05280;Dbxref=GenBank:WP_032231498.1;Name=WP_032231498.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AB69_RS05280;product=ADP compounds hydrolase NudE;protein_id=WP_032231498.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 88285 90420 . + . ID=gene-AB69_RS05275;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AB69_RS05275;old_locus_tag=AB69_3670 NZ_JHDO01000108.1 Protein Homology CDS 88285 90420 . + 0 ID=cds-WP_000104533.1;Parent=gene-AB69_RS05275;Dbxref=GenBank:WP_000104533.1;Name=WP_000104533.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AB69_RS05275;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104533.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 90485 91153 . + . ID=gene-AB69_RS05270;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AB69_RS05270;old_locus_tag=AB69_3671 NZ_JHDO01000108.1 Protein Homology CDS 90485 91153 . + 0 ID=cds-WP_001295168.1;Parent=gene-AB69_RS05270;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AB69_RS05270;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 91164 91565 . + . ID=gene-AB69_RS05265;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AB69_RS05265;old_locus_tag=AB69_3672 NZ_JHDO01000108.1 Protein Homology CDS 91164 91565 . + 0 ID=cds-WP_000660483.1;Parent=gene-AB69_RS05265;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AB69_RS05265;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 91590 92468 . + . ID=gene-AB69_RS05260;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AB69_RS05260;old_locus_tag=AB69_3673 NZ_JHDO01000108.1 Protein Homology CDS 91590 92468 . + 0 ID=cds-WP_001135574.1;Parent=gene-AB69_RS05260;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AB69_RS05260;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 92531 94255 . - . ID=gene-AB69_RS05255;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AB69_RS05255;old_locus_tag=AB69_3674 NZ_JHDO01000108.1 Protein Homology CDS 92531 94255 . - 0 ID=cds-WP_000370879.1;Parent=gene-AB69_RS05255;Dbxref=GenBank:WP_000370879.1;Name=WP_000370879.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=AB69_RS05255;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 94634 96256 . + . ID=gene-AB69_RS05250;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AB69_RS05250;old_locus_tag=AB69_3676 NZ_JHDO01000108.1 Protein Homology CDS 94634 96256 . + 0 ID=cds-WP_001265681.1;Parent=gene-AB69_RS05250;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AB69_RS05250;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 96332 97684 . - . ID=gene-AB69_RS05245;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AB69_RS05245;old_locus_tag=AB69_3677 NZ_JHDO01000108.1 Protein Homology CDS 96332 97684 . - 0 ID=cds-WP_001253696.1;Parent=gene-AB69_RS05245;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AB69_RS05245;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 97681 98400 . - . ID=gene-AB69_RS05240;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AB69_RS05240;old_locus_tag=AB69_3678 NZ_JHDO01000108.1 Protein Homology CDS 97681 98400 . - 0 ID=cds-WP_001157751.1;Parent=gene-AB69_RS05240;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AB69_RS05240;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 98628 99104 . + . ID=gene-AB69_RS05235;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AB69_RS05235;old_locus_tag=AB69_3679 NZ_JHDO01000108.1 Protein Homology CDS 98628 99104 . + 0 ID=cds-WP_000856737.1;Parent=gene-AB69_RS05235;Dbxref=GenBank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=AB69_RS05235;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 99201 101522 . + . ID=gene-AB69_RS05230;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AB69_RS05230;old_locus_tag=AB69_3680 NZ_JHDO01000108.1 Protein Homology CDS 99201 101522 . + 0 ID=cds-WP_032231499.1;Parent=gene-AB69_RS05230;Dbxref=GenBank:WP_032231499.1;Name=WP_032231499.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AB69_RS05230;product=Tex family protein;protein_id=WP_032231499.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 101979 102206 . + . ID=gene-AB69_RS05225;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AB69_RS05225;old_locus_tag=AB69_3681 NZ_JHDO01000108.1 Protein Homology CDS 101979 102206 . + 0 ID=cds-WP_001200455.1;Parent=gene-AB69_RS05225;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AB69_RS05225;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 102223 104544 . + . ID=gene-AB69_RS05220;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AB69_RS05220;old_locus_tag=AB69_3682 NZ_JHDO01000108.1 Protein Homology CDS 102223 104544 . + 0 ID=cds-WP_000737039.1;Parent=gene-AB69_RS05220;Dbxref=GenBank:WP_000737039.1;Name=WP_000737039.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AB69_RS05220;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737039.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 104544 104780 . + . ID=gene-AB69_RS05215;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AB69_RS05215;old_locus_tag=AB69_3683 NZ_JHDO01000108.1 Protein Homology CDS 104544 104780 . + 0 ID=cds-WP_000157586.1;Parent=gene-AB69_RS05215;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AB69_RS05215;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JHDO01000108.1 RefSeq pseudogene 105049 105444 . + . ID=gene-AB69_RS05210;Name=AB69_RS05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS05210;old_locus_tag=AB69_3684;partial=true;pseudo=true;start_range=.,105049 NZ_JHDO01000108.1 Protein Homology CDS 105049 105444 . + 0 ID=cds-AB69_RS05210;Parent=gene-AB69_RS05210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AB69_RS05210;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,105049;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 105473 106243 . - . ID=gene-AB69_RS05205;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AB69_RS05205;old_locus_tag=AB69_3685 NZ_JHDO01000108.1 Protein Homology CDS 105473 106243 . - 0 ID=cds-WP_001060070.1;Parent=gene-AB69_RS05205;Dbxref=GenBank:WP_001060070.1;Name=WP_001060070.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AB69_RS05205;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060070.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 106281 106964 . + . ID=gene-AB69_RS05200;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AB69_RS05200;old_locus_tag=AB69_3687 NZ_JHDO01000108.1 Protein Homology CDS 106281 106964 . + 0 ID=cds-WP_001333371.1;Parent=gene-AB69_RS05200;Dbxref=GenBank:WP_001333371.1;Name=WP_001333371.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AB69_RS05200;product=DNA utilization protein GntX;protein_id=WP_001333371.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 107023 107598 . + . ID=gene-AB69_RS05195;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AB69_RS05195;old_locus_tag=AB69_3688 NZ_JHDO01000108.1 Protein Homology CDS 107023 107598 . + 0 ID=cds-WP_000619389.1;Parent=gene-AB69_RS05195;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AB69_RS05195;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 107958 109274 . + . ID=gene-AB69_RS05190;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AB69_RS05190;old_locus_tag=AB69_3689 NZ_JHDO01000108.1 Protein Homology CDS 107958 109274 . + 0 ID=cds-WP_001131758.1;Parent=gene-AB69_RS05190;Dbxref=GenBank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AB69_RS05190;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 109385 111469 . - . ID=gene-AB69_RS05185;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AB69_RS05185;old_locus_tag=AB69_3690 NZ_JHDO01000108.1 Protein Homology CDS 109385 111469 . - 0 ID=cds-WP_000444343.1;Parent=gene-AB69_RS05185;Dbxref=GenBank:WP_000444343.1;Name=WP_000444343.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AB69_RS05185;product=4-alpha-glucanotransferase;protein_id=WP_000444343.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 111479 113872 . - . ID=gene-AB69_RS05180;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AB69_RS05180;old_locus_tag=AB69_3691 NZ_JHDO01000108.1 Protein Homology CDS 111479 113872 . - 0 ID=cds-WP_000081909.1;Parent=gene-AB69_RS05180;Dbxref=GenBank:WP_000081909.1;Name=WP_000081909.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AB69_RS05180;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 114484 117189 . + . ID=gene-AB69_RS05175;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AB69_RS05175;old_locus_tag=AB69_3692 NZ_JHDO01000108.1 Protein Homology CDS 114484 117189 . + 0 ID=cds-WP_000906961.1;Parent=gene-AB69_RS05175;Dbxref=GenBank:WP_000906961.1;Name=WP_000906961.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417877.1;locus_tag=AB69_RS05175;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906961.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 117232 118248 . - . ID=gene-AB69_RS05170;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AB69_RS05170;old_locus_tag=AB69_3693 NZ_JHDO01000108.1 Protein Homology CDS 117232 118248 . - 0 ID=cds-WP_032179282.1;Parent=gene-AB69_RS05170;Dbxref=GenBank:WP_032179282.1;Name=WP_032179282.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AB69_RS05170;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_032179282.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 118252 119478 . - . ID=gene-AB69_RS05165;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AB69_RS05165;old_locus_tag=AB69_3694 NZ_JHDO01000108.1 Protein Homology CDS 118252 119478 . - 0 ID=cds-WP_001105504.1;Parent=gene-AB69_RS05165;Dbxref=GenBank:WP_001105504.1;Name=WP_001105504.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AB69_RS05165;product=RNA-splicing ligase RtcB;protein_id=WP_001105504.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 119667 121265 . + . ID=gene-AB69_RS05160;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AB69_RS05160;old_locus_tag=AB69_3695 NZ_JHDO01000108.1 Protein Homology CDS 119667 121265 . + 0 ID=cds-WP_001232946.1;Parent=gene-AB69_RS05160;Dbxref=GenBank:WP_001232946.1;Name=WP_001232946.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AB69_RS05160;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232946.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 121247 122005 . - . ID=gene-AB69_RS05155;Name=AB69_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS05155;old_locus_tag=AB69_3696 NZ_JHDO01000108.1 Protein Homology CDS 121247 122005 . - 0 ID=cds-WP_000815099.1;Parent=gene-AB69_RS05155;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AB69_RS05155;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 122022 122852 . - . ID=gene-AB69_RS05150;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AB69_RS05150;old_locus_tag=AB69_3697 NZ_JHDO01000108.1 Protein Homology CDS 122022 122852 . - 0 ID=cds-WP_000928723.1;Parent=gene-AB69_RS05150;Dbxref=GenBank:WP_000928723.1;Name=WP_000928723.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AB69_RS05150;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928723.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 122897 123223 . - . ID=gene-AB69_RS05145;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AB69_RS05145;old_locus_tag=AB69_3698 NZ_JHDO01000108.1 Protein Homology CDS 122897 123223 . - 0 ID=cds-WP_000371928.1;Parent=gene-AB69_RS05145;Dbxref=GenBank:WP_000371928.1;Name=WP_000371928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AB69_RS05145;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 123413 124918 . + . ID=gene-AB69_RS05140;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AB69_RS05140;old_locus_tag=AB69_3699 NZ_JHDO01000108.1 Protein Homology CDS 123413 124918 . + 0 ID=cds-WP_000448136.1;Parent=gene-AB69_RS05140;Dbxref=GenBank:WP_000448136.1;Name=WP_000448136.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417884.1;locus_tag=AB69_RS05140;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448136.1;transl_table=11 NZ_JHDO01000108.1 RefSeq pseudogene 125187 125408 . - . ID=gene-AB69_RS05135;Name=yzgL;gbkey=Gene;gene=yzgL;gene_biotype=pseudogene;locus_tag=AB69_RS05135;old_locus_tag=AB69_3700;partial=true;pseudo=true;start_range=.,125187 NZ_JHDO01000108.1 Protein Homology CDS 125187 125408 . - 0 ID=cds-AB69_RS05135;Parent=gene-AB69_RS05135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yzgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312299.2;locus_tag=AB69_RS05135;partial=true;product=protein YzgL;pseudo=true;start_range=.,125187;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 125534 127981 . - . ID=gene-AB69_RS05130;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AB69_RS05130;old_locus_tag=AB69_3702 NZ_JHDO01000108.1 Protein Homology CDS 125534 127981 . - 0 ID=cds-WP_000993449.1;Parent=gene-AB69_RS05130;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AB69_RS05130;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 128000 129433 . - . ID=gene-AB69_RS05125;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AB69_RS05125;old_locus_tag=AB69_3703 NZ_JHDO01000108.1 Protein Homology CDS 128000 129433 . - 0 ID=cds-WP_001197646.1;Parent=gene-AB69_RS05125;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AB69_RS05125;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 129433 130728 . - . ID=gene-AB69_RS05120;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AB69_RS05120;old_locus_tag=AB69_3704 NZ_JHDO01000108.1 Protein Homology CDS 129433 130728 . - 0 ID=cds-WP_000253975.1;Parent=gene-AB69_RS05120;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AB69_RS05120;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 130746 132719 . - . ID=gene-AB69_RS05115;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AB69_RS05115;old_locus_tag=AB69_3705 NZ_JHDO01000108.1 Protein Homology CDS 130746 132719 . - 0 ID=cds-WP_000192523.1;Parent=gene-AB69_RS05115;Dbxref=GenBank:WP_000192523.1;Name=WP_000192523.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AB69_RS05115;product=glycogen debranching protein GlgX;protein_id=WP_000192523.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 132716 134902 . - . ID=gene-AB69_RS05110;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AB69_RS05110;old_locus_tag=AB69_3706 NZ_JHDO01000108.1 Protein Homology CDS 132716 134902 . - 0 ID=cds-WP_001283723.1;Parent=gene-AB69_RS05110;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AB69_RS05110;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 135175 136278 . - . ID=gene-AB69_RS05105;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB69_RS05105;old_locus_tag=AB69_3707 NZ_JHDO01000108.1 Protein Homology CDS 135175 136278 . - 0 ID=cds-WP_000799956.1;Parent=gene-AB69_RS05105;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AB69_RS05105;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 136471 137064 . + . ID=gene-AB69_RS05100;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AB69_RS05100;old_locus_tag=AB69_3708 NZ_JHDO01000108.1 Protein Homology CDS 136471 137064 . + 0 ID=cds-WP_001002544.1;Parent=gene-AB69_RS05100;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AB69_RS05100;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 137121 138461 . - . ID=gene-AB69_RS05095;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AB69_RS05095;old_locus_tag=AB69_3709 NZ_JHDO01000108.1 Protein Homology CDS 137121 138461 . - 0 ID=cds-WP_000210111.1;Parent=gene-AB69_RS05095;Dbxref=GenBank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AB69_RS05095;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 138465 138992 . - . ID=gene-AB69_RS05090;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AB69_RS05090;old_locus_tag=AB69_3710 NZ_JHDO01000108.1 Protein Homology CDS 138465 138992 . - 0 ID=cds-WP_000108330.1;Parent=gene-AB69_RS05090;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AB69_RS05090;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 139131 140126 . - . ID=gene-AB69_RS05085;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AB69_RS05085;old_locus_tag=AB69_3711 NZ_JHDO01000108.1 Protein Homology CDS 139131 140126 . - 0 ID=cds-WP_000730252.1;Parent=gene-AB69_RS05085;Dbxref=GenBank:WP_000730252.1;Name=WP_000730252.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AB69_RS05085;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730252.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 140350 141045 . - . ID=gene-AB69_RS05080;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AB69_RS05080;old_locus_tag=AB69_3712 NZ_JHDO01000108.1 Protein Homology CDS 140350 141045 . - 0 ID=cds-WP_000639811.1;Parent=gene-AB69_RS05080;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AB69_RS05080;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 141168 142205 . - . ID=gene-AB69_RS05075;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AB69_RS05075;old_locus_tag=AB69_3713 NZ_JHDO01000108.1 Protein Homology CDS 141168 142205 . - 0 ID=cds-WP_000236293.1;Parent=gene-AB69_RS05075;Dbxref=GenBank:WP_000236293.1;Name=WP_000236293.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AB69_RS05075;product=oxidoreductase;protein_id=WP_000236293.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 142538 143026 . + . ID=gene-AB69_RS0125130;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AB69_RS0125130 NZ_JHDO01000108.1 Protein Homology CDS 142538 143026 . + 0 ID=cds-WP_032231500.1;Parent=gene-AB69_RS0125130;Dbxref=GenBank:WP_032231500.1;Name=WP_032231500.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AB69_RS0125130;product=N-acetyltransferase;protein_id=WP_032231500.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 143263 144441 . + . ID=gene-AB69_RS05070;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=AB69_RS05070;old_locus_tag=AB69_3715 NZ_JHDO01000108.1 Protein Homology CDS 143263 144441 . + 0 ID=cds-WP_032231501.1;Parent=gene-AB69_RS05070;Dbxref=GenBank:WP_032231501.1;Name=WP_032231501.1;gbkey=CDS;gene=tssD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AB69_RS05070;product=Hcp1 family type VI secretion system effector;protein_id=WP_032231501.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 144438 144932 . + . ID=gene-AB69_RS05065;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=protein_coding;locus_tag=AB69_RS05065;old_locus_tag=AB69_3716 NZ_JHDO01000108.1 Protein Homology CDS 144438 144932 . + 0 ID=cds-WP_000988499.1;Parent=gene-AB69_RS05065;Dbxref=GenBank:WP_000988499.1;Name=WP_000988499.1;gbkey=CDS;gene=yrhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1;locus_tag=AB69_RS05065;product=protein YrhA;protein_id=WP_000988499.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 145027 145182 . + . ID=gene-AB69_RS29880;Name=yrhD;gbkey=Gene;gene=yrhD;gene_biotype=protein_coding;locus_tag=AB69_RS29880 NZ_JHDO01000108.1 Protein Homology CDS 145027 145182 . + 0 ID=cds-WP_001307436.1;Parent=gene-AB69_RS29880;Dbxref=GenBank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;gene=yrhD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=AB69_RS29880;product=protein YrhD;protein_id=WP_001307436.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 145382 145666 . + . ID=gene-AB69_RS05060;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AB69_RS05060;old_locus_tag=AB69_3717 NZ_JHDO01000108.1 Protein Homology CDS 145382 145666 . + 0 ID=cds-WP_000634159.1;Parent=gene-AB69_RS05060;Dbxref=GenBank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AB69_RS05060;product=YrhB family protein;protein_id=WP_000634159.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 145704 147446 . - . ID=gene-AB69_RS05055;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AB69_RS05055;old_locus_tag=AB69_3718 NZ_JHDO01000108.1 Protein Homology CDS 145704 147446 . - 0 ID=cds-WP_032231502.1;Parent=gene-AB69_RS05055;Dbxref=GenBank:WP_032231502.1;Name=WP_032231502.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417904.1;locus_tag=AB69_RS05055;product=gamma-glutamyltransferase;protein_id=WP_032231502.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 147566 148006 . + . ID=gene-AB69_RS05050;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AB69_RS05050;old_locus_tag=AB69_3719 NZ_JHDO01000108.1 Protein Homology CDS 147566 148006 . + 0 ID=cds-WP_000825996.1;Parent=gene-AB69_RS05050;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AB69_RS05050;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 147993 148736 . - . ID=gene-AB69_RS05045;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AB69_RS05045;old_locus_tag=AB69_3720 NZ_JHDO01000108.1 Protein Homology CDS 147993 148736 . - 0 ID=cds-WP_000073613.1;Parent=gene-AB69_RS05045;Dbxref=GenBank:WP_000073613.1;Name=WP_000073613.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417906.1;locus_tag=AB69_RS05045;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073613.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 148733 149803 . - . ID=gene-AB69_RS05040;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AB69_RS05040;old_locus_tag=AB69_3721 NZ_JHDO01000108.1 Protein Homology CDS 148733 149803 . - 0 ID=cds-WP_000907792.1;Parent=gene-AB69_RS05040;Dbxref=GenBank:WP_000907792.1;Name=WP_000907792.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AB69_RS05040;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907792.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 149805 150650 . - . ID=gene-AB69_RS05035;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AB69_RS05035;old_locus_tag=AB69_3722 NZ_JHDO01000108.1 Protein Homology CDS 149805 150650 . - 0 ID=cds-WP_000572176.1;Parent=gene-AB69_RS05035;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AB69_RS05035;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 150647 151534 . - . ID=gene-AB69_RS05030;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AB69_RS05030;old_locus_tag=AB69_3723 NZ_JHDO01000108.1 Protein Homology CDS 150647 151534 . - 0 ID=cds-WP_000099289.1;Parent=gene-AB69_RS05030;Dbxref=GenBank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AB69_RS05030;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 151632 152948 . - . ID=gene-AB69_RS05025;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AB69_RS05025;old_locus_tag=AB69_3724 NZ_JHDO01000108.1 Protein Homology CDS 151632 152948 . - 0 ID=cds-WP_000803190.1;Parent=gene-AB69_RS05025;Dbxref=GenBank:WP_000803190.1;Name=WP_000803190.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AB69_RS05025;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803190.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 153347 154060 . - . ID=gene-AB69_RS05020;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AB69_RS05020;old_locus_tag=AB69_3726 NZ_JHDO01000108.1 Protein Homology CDS 153347 154060 . - 0 ID=cds-WP_000416891.1;Parent=gene-AB69_RS05020;Dbxref=GenBank:WP_000416891.1;Name=WP_000416891.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417911.4;locus_tag=AB69_RS05020;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416891.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 154062 154829 . - . ID=gene-AB69_RS05015;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AB69_RS05015;old_locus_tag=AB69_3727 NZ_JHDO01000108.1 Protein Homology CDS 154062 154829 . - 0 ID=cds-WP_000082101.1;Parent=gene-AB69_RS05015;Dbxref=GenBank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AB69_RS05015;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 154826 156103 . - . ID=gene-AB69_RS05010;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AB69_RS05010;old_locus_tag=AB69_3728 NZ_JHDO01000108.1 Protein Homology CDS 154826 156103 . - 0 ID=cds-WP_000803813.1;Parent=gene-AB69_RS05010;Dbxref=GenBank:WP_000803813.1;Name=WP_000803813.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417913.1;locus_tag=AB69_RS05010;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803813.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 156100 157026 . - . ID=gene-AB69_RS05005;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AB69_RS05005;old_locus_tag=AB69_3729 NZ_JHDO01000108.1 Protein Homology CDS 156100 157026 . - 0 ID=cds-WP_001295111.1;Parent=gene-AB69_RS05005;Dbxref=GenBank:WP_001295111.1;Name=WP_001295111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AB69_RS05005;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 157074 158183 . - . ID=gene-AB69_RS05000;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AB69_RS05000;old_locus_tag=AB69_3730 NZ_JHDO01000108.1 Protein Homology CDS 157074 158183 . - 0 ID=cds-WP_032231503.1;Parent=gene-AB69_RS05000;Dbxref=GenBank:WP_032231503.1;Name=WP_032231503.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AB69_RS05000;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_032231503.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 158607 158990 . + . ID=gene-AB69_RS04995;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AB69_RS04995;old_locus_tag=AB69_3732 NZ_JHDO01000108.1 Protein Homology CDS 158607 158990 . + 0 ID=cds-WP_000778789.1;Parent=gene-AB69_RS04995;Dbxref=GenBank:WP_000778789.1;Name=WP_000778789.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AB69_RS04995;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778789.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 159189 160292 . - . ID=gene-AB69_RS04990;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AB69_RS04990;old_locus_tag=AB69_3733 NZ_JHDO01000108.1 Protein Homology CDS 159189 160292 . - 0 ID=cds-WP_001021996.1;Parent=gene-AB69_RS04990;Dbxref=GenBank:WP_001021996.1;Name=WP_001021996.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AB69_RS04990;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001021996.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 160563 161417 . - . ID=gene-AB69_RS04985;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AB69_RS04985;old_locus_tag=AB69_3734 NZ_JHDO01000108.1 Protein Homology CDS 160563 161417 . - 0 ID=cds-WP_000130217.1;Parent=gene-AB69_RS04985;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AB69_RS04985;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 161662 162720 . - . ID=gene-AB69_RS04980;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AB69_RS04980;old_locus_tag=AB69_3735 NZ_JHDO01000108.1 Protein Homology CDS 161662 162720 . - 0 ID=cds-WP_001042003.1;Parent=gene-AB69_RS04980;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AB69_RS04980;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 162713 163381 . - . ID=gene-AB69_RS04975;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AB69_RS04975;old_locus_tag=AB69_3736 NZ_JHDO01000108.1 Protein Homology CDS 162713 163381 . - 0 ID=cds-WP_000617723.1;Parent=gene-AB69_RS04975;Dbxref=GenBank:WP_000617723.1;Name=WP_000617723.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AB69_RS04975;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 163384 164880 . - . ID=gene-AB69_RS04970;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AB69_RS04970;old_locus_tag=AB69_3737 NZ_JHDO01000108.1 Protein Homology CDS 163384 164880 . - 0 ID=cds-WP_001040651.1;Parent=gene-AB69_RS04970;Dbxref=GenBank:WP_001040651.1;Name=WP_001040651.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AB69_RS04970;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040651.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 165030 165626 . + . ID=gene-AB69_RS04965;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AB69_RS04965;old_locus_tag=AB69_3738 NZ_JHDO01000108.1 Protein Homology CDS 165030 165626 . + 0 ID=cds-WP_000743193.1;Parent=gene-AB69_RS04965;Dbxref=GenBank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AB69_RS04965;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 165616 165885 . + . ID=gene-AB69_RS04960;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AB69_RS04960;old_locus_tag=AB69_3739 NZ_JHDO01000108.1 Protein Homology CDS 165616 165885 . + 0 ID=cds-WP_001311191.1;Parent=gene-AB69_RS04960;Dbxref=GenBank:WP_001311191.1;Name=WP_001311191.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417923.1;locus_tag=AB69_RS04960;product=DUF1145 family protein;protein_id=WP_001311191.1;transl_table=11 NZ_JHDO01000108.1 RefSeq gene 165903 166600 . - . ID=gene-AB69_RS04955;Name=AB69_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04955;old_locus_tag=AB69_3740 NZ_JHDO01000108.1 Protein Homology CDS 166351 166600 . - 0 ID=cds-WP_094096600.1-13;Parent=gene-AB69_RS04955;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS04955;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000108.1 Protein Homology CDS 165903 166351 . - 2 ID=cds-WP_094096600.1-13;Parent=gene-AB69_RS04955;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS04955;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JHDO01000109.1 1 11032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000109.1 RefSeq region 1 11032 . + . ID=NZ_JHDO01000109.1:1..11032;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000109.1 RefSeq gene 32 277 . - . ID=gene-AB69_RS04950;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AB69_RS04950;old_locus_tag=AB69_3741 NZ_JHDO01000109.1 Protein Homology CDS 32 277 . - 0 ID=cds-WP_000130621.1-2;Parent=gene-AB69_RS04950;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AB69_RS04950;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 498 1163 . + . ID=gene-AB69_RS04945;Name=AB69_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04945;old_locus_tag=AB69_3742 NZ_JHDO01000109.1 Protein Homology CDS 498 1163 . + 0 ID=cds-WP_001100469.1-2;Parent=gene-AB69_RS04945;Dbxref=GenBank:WP_001100469.1;Name=WP_001100469.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AB69_RS04945;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 1236 1793 . + . ID=gene-AB69_RS04940;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AB69_RS04940;old_locus_tag=AB69_3743 NZ_JHDO01000109.1 Protein Homology CDS 1236 1793 . + 0 ID=cds-WP_001245295.1-2;Parent=gene-AB69_RS04940;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AB69_RS04940;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 1797 3014 . - . ID=gene-AB69_RS04935;Name=AB69_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04935;old_locus_tag=AB69_3744 NZ_JHDO01000109.1 Protein Homology CDS 1797 3014 . - 0 ID=cds-WP_001463757.1;Parent=gene-AB69_RS04935;Dbxref=GenBank:WP_001463757.1;Name=WP_001463757.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AB69_RS04935;product=MFS transporter;protein_id=WP_001463757.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 3146 4195 . + . ID=gene-AB69_RS04930;Name=AB69_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04930;old_locus_tag=AB69_3745 NZ_JHDO01000109.1 Protein Homology CDS 3146 4195 . + 0 ID=cds-WP_032231508.1;Parent=gene-AB69_RS04930;Dbxref=GenBank:WP_032231508.1;Name=WP_032231508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AB69_RS04930;product=AI-2E family transporter;protein_id=WP_032231508.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 4250 4837 . + . ID=gene-AB69_RS04925;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AB69_RS04925;old_locus_tag=AB69_3746 NZ_JHDO01000109.1 Protein Homology CDS 4250 4837 . + 0 ID=cds-WP_000285774.1;Parent=gene-AB69_RS04925;Dbxref=GenBank:WP_000285774.1;Name=WP_000285774.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417932.1;locus_tag=AB69_RS04925;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285774.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 4948 6522 . + . ID=gene-AB69_RS04920;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AB69_RS04920;old_locus_tag=AB69_3747 NZ_JHDO01000109.1 Protein Homology CDS 4948 6522 . + 0 ID=cds-WP_000953361.1;Parent=gene-AB69_RS04920;Dbxref=GenBank:WP_000953361.1;Name=WP_000953361.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AB69_RS04920;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953361.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 6522 7466 . + . ID=gene-AB69_RS04915;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AB69_RS04915;old_locus_tag=AB69_3748 NZ_JHDO01000109.1 Protein Homology CDS 6522 7466 . + 0 ID=cds-WP_000947068.1;Parent=gene-AB69_RS04915;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AB69_RS04915;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 7463 8296 . + . ID=gene-AB69_RS04910;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AB69_RS04910;old_locus_tag=AB69_3749 NZ_JHDO01000109.1 Protein Homology CDS 7463 8296 . + 0 ID=cds-WP_001008963.1;Parent=gene-AB69_RS04910;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AB69_RS04910;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 8296 9060 . + . ID=gene-AB69_RS04905;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AB69_RS04905;old_locus_tag=AB69_3750 NZ_JHDO01000109.1 Protein Homology CDS 8296 9060 . + 0 ID=cds-WP_001136229.1;Parent=gene-AB69_RS04905;Dbxref=GenBank:WP_001136229.1;Name=WP_001136229.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AB69_RS04905;product=nickel import ATP-binding protein NikD;protein_id=WP_001136229.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 9057 9863 . + . ID=gene-AB69_RS04900;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AB69_RS04900;old_locus_tag=AB69_3751 NZ_JHDO01000109.1 Protein Homology CDS 9057 9863 . + 0 ID=cds-WP_000173631.1;Parent=gene-AB69_RS04900;Dbxref=GenBank:WP_000173631.1;Name=WP_000173631.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AB69_RS04900;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 9869 10270 . + . ID=gene-AB69_RS04895;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AB69_RS04895;old_locus_tag=AB69_3752 NZ_JHDO01000109.1 Protein Homology CDS 9869 10270 . + 0 ID=cds-WP_001190062.1;Parent=gene-AB69_RS04895;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AB69_RS04895;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JHDO01000109.1 RefSeq gene 10473 11032 . + . ID=gene-AB69_RS04890;Name=AB69_RS04890;end_range=11032,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04890;old_locus_tag=AB69_3753;partial=true NZ_JHDO01000109.1 Protein Homology CDS 10473 11032 . + 0 ID=cds-WP_001581589.1;Parent=gene-AB69_RS04890;Dbxref=GenBank:WP_001581589.1;Name=WP_001581589.1;end_range=11032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB69_RS04890;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001581589.1;transl_table=11 ##sequence-region NZ_JHDO01000110.1 1 2360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000110.1 RefSeq region 1 2360 . + . ID=NZ_JHDO01000110.1:1..2360;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000110.1 RefSeq gene 1 954 . + . ID=gene-AB69_RS04885;Name=AB69_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04885;old_locus_tag=AB69_3754;partial=true;start_range=.,1 NZ_JHDO01000110.1 Protein Homology CDS 1 954 . + 0 ID=cds-WP_032235706.1;Parent=gene-AB69_RS04885;Dbxref=GenBank:WP_032235706.1;Name=WP_032235706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB69_RS04885;partial=true;product=DUF4329 domain-containing protein;protein_id=WP_032235706.1;start_range=.,1;transl_table=11 NZ_JHDO01000110.1 RefSeq pseudogene 926 1309 . + . ID=gene-AB69_RS0125145;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=pseudogene;locus_tag=AB69_RS0125145;pseudo=true NZ_JHDO01000110.1 Protein Homology CDS 926 1309 . + 0 ID=cds-AB69_RS0125145;Parent=gene-AB69_RS0125145;Note=This BlastRule distinguishes YhhH from its paralog YbbC. Both are named for founding members from Escherichia coli K-12%2C and belong Pfam family PF15631.%3B internal stop;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=AB69_RS0125145;product=protein YhhH;pseudo=true;transl_table=11 NZ_JHDO01000110.1 RefSeq pseudogene 1414 1764 . + . ID=gene-AB69_RS0125150;Name=AB69_RS0125150;end_range=1764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0125150;partial=true;pseudo=true NZ_JHDO01000110.1 Protein Homology CDS 1414 1764 . + 0 ID=cds-AB69_RS0125150;Parent=gene-AB69_RS0125150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AB69_RS0125150;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000110.1 RefSeq pseudogene 1905 2360 . + . ID=gene-AB69_RS04880;Name=AB69_RS04880;end_range=2360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS04880;old_locus_tag=AB69_3755;partial=true;pseudo=true NZ_JHDO01000110.1 Protein Homology CDS 1905 2360 . + 0 ID=cds-AB69_RS04880;Parent=gene-AB69_RS04880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2360,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS04880;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000111.1 1 1517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000111.1 RefSeq region 1 1517 . + . ID=NZ_JHDO01000111.1:1..1517;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000111.1 RefSeq gene 1 827 . + . ID=gene-AB69_RS04875;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AB69_RS04875;old_locus_tag=AB69_3756;partial=true;start_range=.,1 NZ_JHDO01000111.1 Protein Homology CDS 1 827 . + 2 ID=cds-WP_024205985.1;Parent=gene-AB69_RS04875;Dbxref=GenBank:WP_024205985.1;Name=WP_024205985.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AB69_RS04875;partial=true;product=magnesium/cobalt transporter CorA;protein_id=WP_024205985.1;start_range=.,1;transl_table=11 NZ_JHDO01000111.1 RefSeq pseudogene 965 1517 . + . ID=gene-AB69_RS28955;Name=AB69_RS28955;end_range=1517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28955;partial=true;pseudo=true NZ_JHDO01000111.1 Protein Homology CDS 965 1517 . + 0 ID=cds-AB69_RS28955;Parent=gene-AB69_RS28955;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1517,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28955;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000112.1 1 73393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000112.1 RefSeq region 1 73393 . + . ID=NZ_JHDO01000112.1:1..73393;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000112.1 RefSeq pseudogene 1 594 . + . ID=gene-AB69_RS04865;Name=AB69_RS04865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS04865;old_locus_tag=AB69_3758;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000112.1 Protein Homology CDS 1 594 . + 0 ID=cds-AB69_RS04865;Parent=gene-AB69_RS04865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB69_RS04865;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 759 1883 . - . ID=gene-AB69_RS04860;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AB69_RS04860;old_locus_tag=AB69_3759 NZ_JHDO01000112.1 Protein Homology CDS 759 1883 . - 0 ID=cds-WP_001216257.1;Parent=gene-AB69_RS04860;Dbxref=GenBank:WP_001216257.1;Name=WP_001216257.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AB69_RS04860;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 1883 4618 . - . ID=gene-AB69_RS04855;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AB69_RS04855;old_locus_tag=AB69_3760 NZ_JHDO01000112.1 Protein Homology CDS 1883 4618 . - 0 ID=cds-WP_000149156.1;Parent=gene-AB69_RS04855;Dbxref=GenBank:WP_000149156.1;Name=WP_000149156.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AB69_RS04855;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149156.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 4615 5682 . - . ID=gene-AB69_RS04850;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AB69_RS04850;old_locus_tag=AB69_3761 NZ_JHDO01000112.1 Protein Homology CDS 4615 5682 . - 0 ID=cds-WP_000361491.1;Parent=gene-AB69_RS04850;Dbxref=GenBank:WP_000361491.1;Name=WP_000361491.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AB69_RS04850;product=HlyD family secretion protein;protein_id=WP_000361491.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 5745 5858 . - . ID=gene-AB69_RS30435;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AB69_RS30435;old_locus_tag=AB69_3762 NZ_JHDO01000112.1 Protein Homology CDS 5745 5858 . - 0 ID=cds-WP_001296785.1;Parent=gene-AB69_RS30435;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AB69_RS30435;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 6048 7670 . - . ID=gene-AB69_RS04845;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AB69_RS04845;old_locus_tag=AB69_3763 NZ_JHDO01000112.1 Protein Homology CDS 6048 7670 . - 0 ID=cds-WP_001311193.1;Parent=gene-AB69_RS04845;Dbxref=GenBank:WP_001311193.1;Name=WP_001311193.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AB69_RS04845;product=YhiJ/YhiL family protein;protein_id=WP_001311193.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 7932 9539 . - . ID=gene-AB69_RS04840;Name=AB69_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04840;old_locus_tag=AB69_3764 NZ_JHDO01000112.1 Protein Homology CDS 7932 9539 . - 0 ID=cds-WP_032231514.1;Parent=gene-AB69_RS04840;Dbxref=GenBank:WP_032231514.1;Name=WP_032231514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AB69_RS04840;product=YhiJ/YhiL family protein;protein_id=WP_032231514.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 9922 10974 . + . ID=gene-AB69_RS04835;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AB69_RS04835;old_locus_tag=AB69_3767 NZ_JHDO01000112.1 Protein Homology CDS 9922 10974 . + 0 ID=cds-WP_001028905.1;Parent=gene-AB69_RS04835;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AB69_RS04835;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 11635 12069 . - . ID=gene-AB69_RS04830;Name=pcoE;gbkey=Gene;gene=pcoE;gene_biotype=protein_coding;locus_tag=AB69_RS04830;old_locus_tag=AB69_3768 NZ_JHDO01000112.1 Protein Homology CDS 11635 12069 . - 0 ID=cds-WP_000723069.1;Parent=gene-AB69_RS04830;Dbxref=GenBank:WP_000723069.1;Name=WP_000723069.1;gbkey=CDS;gene=pcoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723069.1;locus_tag=AB69_RS04830;product=copper resistance system metallochaperone PcoE;protein_id=WP_000723069.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 12287 13687 . - . ID=gene-AB69_RS04825;Name=pcoS;gbkey=Gene;gene=pcoS;gene_biotype=protein_coding;locus_tag=AB69_RS04825;old_locus_tag=AB69_3769 NZ_JHDO01000112.1 Protein Homology CDS 12287 13687 . - 0 ID=cds-WP_001211180.1;Parent=gene-AB69_RS04825;Dbxref=GenBank:WP_001211180.1;Name=WP_001211180.1;gbkey=CDS;gene=pcoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1;locus_tag=AB69_RS04825;product=copper resistance membrane spanning protein PcoS;protein_id=WP_001211180.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 13684 14364 . - . ID=gene-AB69_RS04820;Name=pcoR;gbkey=Gene;gene=pcoR;gene_biotype=protein_coding;locus_tag=AB69_RS04820;old_locus_tag=AB69_3770 NZ_JHDO01000112.1 Protein Homology CDS 13684 14364 . - 0 ID=cds-WP_001188930.1;Parent=gene-AB69_RS04820;Dbxref=GenBank:WP_001188930.1;Name=WP_001188930.1;gbkey=CDS;gene=pcoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1;locus_tag=AB69_RS04820;product=copper response regulator transcription factor PcoR;protein_id=WP_001188930.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 14419 15297 . - . ID=gene-AB69_RS0125165;Name=pcoD;gbkey=Gene;gene=pcoD;gene_biotype=protein_coding;locus_tag=AB69_RS0125165;old_locus_tag=AB69_3771 NZ_JHDO01000112.1 Protein Homology CDS 14419 15297 . - 0 ID=cds-WP_229692861.1;Parent=gene-AB69_RS0125165;Dbxref=GenBank:WP_229692861.1;Name=WP_229692861.1;gbkey=CDS;gene=pcoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1;locus_tag=AB69_RS0125165;product=copper resistance inner membrane protein PcoD;protein_id=WP_229692861.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 15353 15733 . - . ID=gene-AB69_RS04815;Name=pcoC;gbkey=Gene;gene=pcoC;gene_biotype=protein_coding;locus_tag=AB69_RS04815;old_locus_tag=AB69_3773 NZ_JHDO01000112.1 Protein Homology CDS 15353 15733 . - 0 ID=cds-WP_000025662.1;Parent=gene-AB69_RS04815;Dbxref=GenBank:WP_000025662.1;Name=WP_000025662.1;gbkey=CDS;gene=pcoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1;locus_tag=AB69_RS04815;product=copper resistance system metallochaperone PcoC;protein_id=WP_000025662.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 15773 16663 . - . ID=gene-AB69_RS04810;Name=pcoB;gbkey=Gene;gene=pcoB;gene_biotype=protein_coding;locus_tag=AB69_RS04810;old_locus_tag=AB69_3774 NZ_JHDO01000112.1 Protein Homology CDS 15773 16663 . - 0 ID=cds-WP_001378118.1;Parent=gene-AB69_RS04810;Dbxref=GenBank:WP_001378118.1;Name=WP_001378118.1;gbkey=CDS;gene=pcoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1;locus_tag=AB69_RS04810;product=copper resistance outer membrane transporter PcoB;protein_id=WP_001378118.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 16669 18486 . - . ID=gene-AB69_RS04805;Name=pcoA;gbkey=Gene;gene=pcoA;gene_biotype=protein_coding;locus_tag=AB69_RS04805;old_locus_tag=AB69_3775 NZ_JHDO01000112.1 Protein Homology CDS 16669 18486 . - 0 ID=cds-WP_000925243.1;Parent=gene-AB69_RS04805;Dbxref=GenBank:WP_000925243.1;Name=WP_000925243.1;gbkey=CDS;gene=pcoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1;locus_tag=AB69_RS04805;product=multicopper oxidase PcoA;protein_id=WP_000925243.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 18721 19170 . + . ID=gene-AB69_RS04800;Name=AB69_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04800;old_locus_tag=AB69_3776 NZ_JHDO01000112.1 Protein Homology CDS 18721 19170 . + 0 ID=cds-WP_001023231.1;Parent=gene-AB69_RS04800;Dbxref=GenBank:WP_001023231.1;Name=WP_001023231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1;locus_tag=AB69_RS04800;product=hypothetical protein;protein_id=WP_001023231.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 19445 20182 . + . ID=gene-AB69_RS04795;Name=AB69_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04795;old_locus_tag=AB69_3777 NZ_JHDO01000112.1 Protein Homology CDS 19445 20182 . + 0 ID=cds-WP_032231516.1;Parent=gene-AB69_RS04795;Dbxref=GenBank:WP_032231516.1;Name=WP_032231516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1;locus_tag=AB69_RS04795;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_032231516.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 20216 20413 . - . ID=gene-AB69_RS04790;Name=AB69_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04790;old_locus_tag=AB69_3778 NZ_JHDO01000112.1 Protein Homology CDS 20216 20413 . - 0 ID=cds-WP_000843494.1;Parent=gene-AB69_RS04790;Dbxref=GenBank:WP_000843494.1;Name=WP_000843494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1;locus_tag=AB69_RS04790;product=DUF2933 domain-containing protein;protein_id=WP_000843494.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 20454 22928 . - . ID=gene-AB69_RS0125175;Name=silP;gbkey=Gene;gene=silP;gene_biotype=protein_coding;locus_tag=AB69_RS0125175;old_locus_tag=AB69_3779 NZ_JHDO01000112.1 Protein Homology CDS 20454 22928 . - 0 ID=cds-WP_139301654.1;Parent=gene-AB69_RS0125175;Dbxref=GenBank:WP_139301654.1;Name=WP_139301654.1;gbkey=CDS;gene=silP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489447.1;locus_tag=AB69_RS0125175;product=Ag(+)-translocating P-type ATPase SilP;protein_id=WP_139301654.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 23026 23466 . - . ID=gene-AB69_RS04785;Name=AB69_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04785;old_locus_tag=AB69_3781 NZ_JHDO01000112.1 Protein Homology CDS 23026 23466 . - 0 ID=cds-WP_001549797.1;Parent=gene-AB69_RS04785;Dbxref=GenBank:WP_001549797.1;Name=WP_001549797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1;locus_tag=AB69_RS04785;product=DUF411 domain-containing protein;protein_id=WP_001549797.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 23552 26698 . - . ID=gene-AB69_RS04780;Name=silA;gbkey=Gene;gene=silA;gene_biotype=protein_coding;locus_tag=AB69_RS04780;old_locus_tag=AB69_3782 NZ_JHDO01000112.1 Protein Homology CDS 23552 26698 . - 0 ID=cds-WP_032231520.1;Parent=gene-AB69_RS04780;Dbxref=GenBank:WP_032231520.1;Name=WP_032231520.1;gbkey=CDS;gene=silA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=AB69_RS04780;product=Cu(+)/Ag(+) efflux RND transporter permease subunit SilA;protein_id=WP_032231520.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 26709 28001 . - . ID=gene-AB69_RS04775;Name=silB;gbkey=Gene;gene=silB;gene_biotype=protein_coding;locus_tag=AB69_RS04775;old_locus_tag=AB69_3783 NZ_JHDO01000112.1 Protein Homology CDS 26709 28001 . - 0 ID=cds-WP_001446341.1;Parent=gene-AB69_RS04775;Dbxref=GenBank:WP_001446341.1;Name=WP_001446341.1;gbkey=CDS;gene=silB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1;locus_tag=AB69_RS04775;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB;protein_id=WP_001446341.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 28115 28468 . - . ID=gene-AB69_RS04770;Name=AB69_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04770;old_locus_tag=AB69_3784 NZ_JHDO01000112.1 Protein Homology CDS 28115 28468 . - 0 ID=cds-WP_001246152.1;Parent=gene-AB69_RS04770;Dbxref=GenBank:WP_001246152.1;Name=WP_001246152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1;locus_tag=AB69_RS04770;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF;protein_id=WP_001246152.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 28496 29881 . - . ID=gene-AB69_RS04765;Name=silC;gbkey=Gene;gene=silC;gene_biotype=protein_coding;locus_tag=AB69_RS04765;old_locus_tag=AB69_3785 NZ_JHDO01000112.1 Protein Homology CDS 28496 29881 . - 0 ID=cds-WP_001507116.1;Parent=gene-AB69_RS04765;Dbxref=GenBank:WP_001507116.1;Name=WP_001507116.1;gbkey=CDS;gene=silC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1;locus_tag=AB69_RS04765;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC;protein_id=WP_001507116.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 30071 30751 . + . ID=gene-AB69_RS04760;Name=silR;gbkey=Gene;gene=silR;gene_biotype=protein_coding;locus_tag=AB69_RS04760;old_locus_tag=AB69_3787 NZ_JHDO01000112.1 Protein Homology CDS 30071 30751 . + 0 ID=cds-WP_000697966.1;Parent=gene-AB69_RS04760;Dbxref=GenBank:WP_000697966.1;Name=WP_000697966.1;gbkey=CDS;gene=silR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1;locus_tag=AB69_RS04760;product=copper/silver response regulator transcription factor SilR;protein_id=WP_000697966.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 30744 32225 . + . ID=gene-AB69_RS04755;Name=silS;gbkey=Gene;gene=silS;gene_biotype=protein_coding;locus_tag=AB69_RS04755;old_locus_tag=AB69_3788 NZ_JHDO01000112.1 Protein Homology CDS 30744 32225 . + 0 ID=cds-WP_000555733.1;Parent=gene-AB69_RS04755;Dbxref=GenBank:WP_000555733.1;Name=WP_000555733.1;gbkey=CDS;gene=silS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005763473.1;locus_tag=AB69_RS04755;product=copper/silver sensor histidine kinase SilS;protein_id=WP_000555733.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 32470 32901 . + . ID=gene-AB69_RS04750;Name=silE;gbkey=Gene;gene=silE;gene_biotype=protein_coding;locus_tag=AB69_RS04750;old_locus_tag=AB69_3789 NZ_JHDO01000112.1 Protein Homology CDS 32470 32901 . + 0 ID=cds-WP_000790485.1;Parent=gene-AB69_RS04750;Dbxref=GenBank:WP_000790485.1;Name=WP_000790485.1;Ontology_term=GO:0046872;gbkey=CDS;gene=silE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178091.1;locus_tag=AB69_RS04750;product=silver-binding protein SilE;protein_id=WP_000790485.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 33049 33399 . + . ID=gene-AB69_RS04745;Name=copM;gbkey=Gene;gene=copM;gene_biotype=protein_coding;locus_tag=AB69_RS04745;old_locus_tag=AB69_3790 NZ_JHDO01000112.1 Protein Homology CDS 33049 33399 . + 0 ID=cds-WP_001549799.1;Parent=gene-AB69_RS04745;Dbxref=GenBank:WP_001549799.1;Name=WP_001549799.1;Ontology_term=GO:0055070,GO:0016530;gbkey=CDS;gene=copM;go_function=metallochaperone activity|0016530||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1;locus_tag=AB69_RS04745;product=CopM family metallochaperone;protein_id=WP_001549799.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 33568 35394 . - . ID=gene-AB69_RS04740;Name=AB69_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04740;old_locus_tag=AB69_3791 NZ_JHDO01000112.1 Protein Homology CDS 33568 35394 . - 0 ID=cds-WP_001549800.1;Parent=gene-AB69_RS04740;Dbxref=GenBank:WP_001549800.1;Name=WP_001549800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849142.1;locus_tag=AB69_RS04740;product=AAA family ATPase;protein_id=WP_001549800.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 35958 36257 . - . ID=gene-AB69_RS0125180;Name=AB69_RS0125180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0125180 NZ_JHDO01000112.1 Protein Homology CDS 35958 36257 . - 0 ID=cds-WP_001097216.1;Parent=gene-AB69_RS0125180;Dbxref=GenBank:WP_001097216.1;Name=WP_001097216.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097216.1;locus_tag=AB69_RS0125180;product=helix-turn-helix domain-containing protein;protein_id=WP_001097216.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 36610 37536 . - . ID=gene-AB69_RS04735;Name=AB69_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04735;old_locus_tag=AB69_3793 NZ_JHDO01000112.1 Protein Homology CDS 36610 37536 . - 0 ID=cds-WP_032231523.1;Parent=gene-AB69_RS04735;Dbxref=GenBank:WP_032231523.1;Name=WP_032231523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262420.1;locus_tag=AB69_RS04735;product=hypothetical protein;protein_id=WP_032231523.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 37548 39104 . - . ID=gene-AB69_RS04730;Name=AB69_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04730;old_locus_tag=AB69_3794 NZ_JHDO01000112.1 Protein Homology CDS 37548 39104 . - 0 ID=cds-WP_032231524.1;Parent=gene-AB69_RS04730;Dbxref=GenBank:WP_032231524.1;Name=WP_032231524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324699.1;locus_tag=AB69_RS04730;product=TnsD family Tn7-like transposition protein;protein_id=WP_032231524.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 39145 40593 . - . ID=gene-AB69_RS04725;Name=AB69_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04725;old_locus_tag=AB69_3795 NZ_JHDO01000112.1 Protein Homology CDS 39145 40593 . - 0 ID=cds-WP_001049180.1;Parent=gene-AB69_RS04725;Dbxref=GenBank:WP_001049180.1;Name=WP_001049180.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049180.1;locus_tag=AB69_RS04725;product=ATP-binding protein;protein_id=WP_001049180.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 40593 42716 . - . ID=gene-AB69_RS04720;Name=AB69_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04720;old_locus_tag=AB69_3796 NZ_JHDO01000112.1 Protein Homology CDS 40593 42716 . - 0 ID=cds-WP_000351433.1;Parent=gene-AB69_RS04720;Dbxref=GenBank:WP_000351433.1;Name=WP_000351433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351432.1;locus_tag=AB69_RS04720;product=transposase;protein_id=WP_000351433.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 42703 43545 . - . ID=gene-AB69_RS04715;Name=AB69_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04715;old_locus_tag=AB69_3797 NZ_JHDO01000112.1 Protein Homology CDS 42703 43545 . - 0 ID=cds-WP_000090707.1;Parent=gene-AB69_RS04715;Dbxref=GenBank:WP_000090707.1;Name=WP_000090707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246651.1;locus_tag=AB69_RS04715;product=TnsA endonuclease N-terminal domain-containing protein;protein_id=WP_000090707.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 43688 44890 . - . ID=gene-AB69_RS04710;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AB69_RS04710;old_locus_tag=AB69_3798 NZ_JHDO01000112.1 Protein Homology CDS 43688 44890 . - 0 ID=cds-WP_000439172.1;Parent=gene-AB69_RS04710;Dbxref=GenBank:WP_000439172.1;Name=WP_000439172.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439151.1;locus_tag=AB69_RS04710;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439172.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 45122 46621 . + . ID=gene-AB69_RS04705;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AB69_RS04705;old_locus_tag=AB69_3799 NZ_JHDO01000112.1 Protein Homology CDS 45122 46621 . + 0 ID=cds-WP_000902780.1;Parent=gene-AB69_RS04705;Dbxref=GenBank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AB69_RS04705;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 46865 47200 . - . ID=gene-AB69_RS0125185;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AB69_RS0125185;old_locus_tag=AB69_3800 NZ_JHDO01000112.1 Protein Homology CDS 46865 47200 . - 0 ID=cds-WP_000626187.1;Parent=gene-AB69_RS0125185;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AB69_RS0125185;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 47591 48025 . + . ID=gene-AB69_RS04700;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AB69_RS04700;old_locus_tag=AB69_3801 NZ_JHDO01000112.1 Protein Homology CDS 47591 48025 . + 0 ID=cds-WP_000323571.1;Parent=gene-AB69_RS04700;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AB69_RS04700;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 48092 48145 . - . ID=gene-AB69_RS30440;Name=AB69_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30440 NZ_JHDO01000112.1 Protein Homology CDS 48092 48145 . - 0 ID=cds-WP_223200729.1;Parent=gene-AB69_RS30440;Dbxref=GenBank:WP_223200729.1;Name=WP_223200729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=AB69_RS30440;product=hypothetical protein;protein_id=WP_223200729.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 48123 48176 . - . ID=gene-AB69_RS30445;Name=AB69_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30445 NZ_JHDO01000112.1 Protein Homology CDS 48123 48176 . - 0 ID=cds-WP_211180512.1;Parent=gene-AB69_RS30445;Dbxref=GenBank:WP_211180512.1;Name=WP_211180512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AB69_RS30445;product=protein YriB;protein_id=WP_211180512.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 48342 49811 . + . ID=gene-AB69_RS04695;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AB69_RS04695;old_locus_tag=AB69_3802 NZ_JHDO01000112.1 Protein Homology CDS 48342 49811 . + 0 ID=cds-WP_001098652.1;Parent=gene-AB69_RS04695;Dbxref=GenBank:WP_001098652.1;Name=WP_001098652.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AB69_RS04695;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098652.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 49860 50612 . - . ID=gene-AB69_RS04690;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AB69_RS04690;old_locus_tag=AB69_3803 NZ_JHDO01000112.1 Protein Homology CDS 49860 50612 . - 0 ID=cds-WP_000686620.1;Parent=gene-AB69_RS04690;Dbxref=GenBank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AB69_RS04690;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 50620 52662 . - . ID=gene-AB69_RS04685;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AB69_RS04685;old_locus_tag=AB69_3804 NZ_JHDO01000112.1 Protein Homology CDS 50620 52662 . - 0 ID=cds-WP_032231526.1;Parent=gene-AB69_RS04685;Dbxref=GenBank:WP_032231526.1;Name=WP_032231526.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AB69_RS04685;product=oligopeptidase A;protein_id=WP_032231526.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 52865 53707 . + . ID=gene-AB69_RS04680;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AB69_RS04680;old_locus_tag=AB69_3805 NZ_JHDO01000112.1 Protein Homology CDS 52865 53707 . + 0 ID=cds-WP_001300574.1;Parent=gene-AB69_RS04680;Dbxref=GenBank:WP_001300574.1;Name=WP_001300574.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=AB69_RS04680;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_001300574.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 53779 55131 . + . ID=gene-AB69_RS04675;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AB69_RS04675;old_locus_tag=AB69_3806 NZ_JHDO01000112.1 Protein Homology CDS 53779 55131 . + 0 ID=cds-WP_000160808.1;Parent=gene-AB69_RS04675;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AB69_RS04675;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 55185 55268 . - . ID=gene-AB69_RS04670;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB69_RS04670;old_locus_tag=AB69_3807 NZ_JHDO01000112.1 Protein Homology CDS 55185 55268 . - 0 ID=cds-WP_001295215.1-2;Parent=gene-AB69_RS04670;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AB69_RS04670;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 56239 56592 . + . ID=gene-AB69_RS04660;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB69_RS04660;old_locus_tag=AB69_3809 NZ_JHDO01000112.1 Protein Homology CDS 56239 56592 . + 0 ID=cds-WP_000008957.1-2;Parent=gene-AB69_RS04660;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB69_RS04660;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 56646 57935 . + . ID=gene-AB69_RS04655;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AB69_RS04655;old_locus_tag=AB69_3810 NZ_JHDO01000112.1 Protein Homology CDS 56646 57935 . + 0 ID=cds-WP_000922639.1;Parent=gene-AB69_RS04655;Dbxref=GenBank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB69_RS04655;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 57948 58373 . + . ID=gene-AB69_RS04650;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB69_RS04650;old_locus_tag=AB69_3811 NZ_JHDO01000112.1 Protein Homology CDS 57948 58373 . + 0 ID=cds-WP_000065769.1;Parent=gene-AB69_RS04650;Dbxref=GenBank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AB69_RS04650;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 59002 60225 . + . ID=gene-AB69_RS04645;Name=AB69_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04645;old_locus_tag=AB69_3813 NZ_JHDO01000112.1 Protein Homology CDS 59002 60225 . + 0 ID=cds-WP_000020596.1;Parent=gene-AB69_RS04645;Dbxref=GenBank:WP_000020596.1;Name=WP_000020596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=AB69_RS04645;product=hypothetical protein;protein_id=WP_000020596.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 60473 61039 . + . ID=gene-AB69_RS04640;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AB69_RS04640;old_locus_tag=AB69_3814 NZ_JHDO01000112.1 Protein Homology CDS 60473 61039 . + 0 ID=cds-WP_001057453.1;Parent=gene-AB69_RS04640;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AB69_RS04640;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 61195 61725 . + . ID=gene-AB69_RS04635;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AB69_RS04635;old_locus_tag=AB69_3815 NZ_JHDO01000112.1 Protein Homology CDS 61195 61725 . + 0 ID=cds-WP_000478619.1;Parent=gene-AB69_RS04635;Dbxref=GenBank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AB69_RS04635;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 61767 62414 . - . ID=gene-AB69_RS04630;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AB69_RS04630;old_locus_tag=AB69_3816 NZ_JHDO01000112.1 Protein Homology CDS 61767 62414 . - 0 ID=cds-WP_001296814.1;Parent=gene-AB69_RS04630;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AB69_RS04630;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 62478 62804 . - . ID=gene-AB69_RS04625;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AB69_RS04625;old_locus_tag=AB69_3817 NZ_JHDO01000112.1 Protein Homology CDS 62478 62804 . - 0 ID=cds-WP_001298717.1;Parent=gene-AB69_RS04625;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AB69_RS04625;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 62920 63252 . - . ID=gene-AB69_RS04620;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AB69_RS04620;old_locus_tag=AB69_3818 NZ_JHDO01000112.1 Protein Homology CDS 62920 63252 . - 0 ID=cds-WP_000756550.1;Parent=gene-AB69_RS04620;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AB69_RS04620;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 63507 64079 . + . ID=gene-AB69_RS04615;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AB69_RS04615;old_locus_tag=AB69_3819 NZ_JHDO01000112.1 Protein Homology CDS 63507 64079 . + 0 ID=cds-WP_000965672.1;Parent=gene-AB69_RS04615;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AB69_RS04615;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 64878 65405 . + . ID=gene-AB69_RS04610;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AB69_RS04610;old_locus_tag=AB69_3820 NZ_JHDO01000112.1 Protein Homology CDS 64878 65405 . + 0 ID=cds-WP_000576690.1;Parent=gene-AB69_RS04610;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AB69_RS04610;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 65406 65684 . - . ID=gene-AB69_RS0125190;Name=AB69_RS0125190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0125190 NZ_JHDO01000112.1 Protein Homology CDS 65406 65684 . - 0 ID=cds-WP_001205329.1;Parent=gene-AB69_RS0125190;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AB69_RS0125190;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 65792 66901 . + . ID=gene-AB69_RS04605;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AB69_RS04605;old_locus_tag=AB69_3821 NZ_JHDO01000112.1 Protein Homology CDS 65792 66901 . + 0 ID=cds-WP_001340474.1;Parent=gene-AB69_RS04605;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AB69_RS04605;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 66926 70039 . + . ID=gene-AB69_RS04600;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AB69_RS04600;old_locus_tag=AB69_3822 NZ_JHDO01000112.1 Protein Homology CDS 66926 70039 . + 0 ID=cds-WP_032235708.1;Parent=gene-AB69_RS04600;Dbxref=GenBank:WP_032235708.1;Name=WP_032235708.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AB69_RS04600;product=multidrug efflux pump RND permease MdtF;protein_id=WP_032235708.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 70402 71130 . - . ID=gene-AB69_RS04595;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AB69_RS04595;old_locus_tag=AB69_3823 NZ_JHDO01000112.1 Protein Homology CDS 70402 71130 . - 0 ID=cds-WP_000149999.1;Parent=gene-AB69_RS04595;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AB69_RS04595;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 71498 72322 . - . ID=gene-AB69_RS04590;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AB69_RS04590;old_locus_tag=AB69_3824 NZ_JHDO01000112.1 Protein Homology CDS 71498 72322 . - 0 ID=cds-WP_001191059.1;Parent=gene-AB69_RS04590;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AB69_RS04590;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11 NZ_JHDO01000112.1 RefSeq gene 72692 73393 . - . ID=gene-AB69_RS04585;Name=AB69_RS04585;end_range=73393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04585;old_locus_tag=AB69_3825;partial=true NZ_JHDO01000112.1 Protein Homology CDS 72692 73393 . - 0 ID=cds-WP_021514758.1;Parent=gene-AB69_RS04585;Dbxref=GenBank:WP_021514758.1;Name=WP_021514758.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;end_range=73393,.;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB69_RS04585;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_021514758.1;transl_table=11 ##sequence-region NZ_JHDO01000113.1 1 94977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000113.1 RefSeq region 1 94977 . + . ID=NZ_JHDO01000113.1:1..94977;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000113.1 RefSeq gene 1 1023 . + . ID=gene-AB69_RS04580;Name=AB69_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04580;old_locus_tag=AB69_3826;partial=true;start_range=.,1 NZ_JHDO01000113.1 Protein Homology CDS 1 1023 . + 0 ID=cds-WP_050429042.1;Parent=gene-AB69_RS04580;Dbxref=GenBank:WP_050429042.1;Name=WP_050429042.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AB69_RS04580;partial=true;product=ISAs1-like element ISEc5 family transposase;protein_id=WP_050429042.1;start_range=.,1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 1123 1356 . + . ID=gene-AB69_RS04575;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AB69_RS04575;old_locus_tag=AB69_3827 NZ_JHDO01000113.1 Protein Homology CDS 1123 1356 . + 0 ID=cds-WP_001120143.1;Parent=gene-AB69_RS04575;Dbxref=GenBank:WP_001120143.1;Name=WP_001120143.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415978.1;locus_tag=AB69_RS04575;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 1353 1922 . - . ID=gene-AB69_RS04570;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AB69_RS04570;old_locus_tag=AB69_3828 NZ_JHDO01000113.1 Protein Homology CDS 1353 1922 . - 0 ID=cds-WP_000085899.1;Parent=gene-AB69_RS04570;Dbxref=GenBank:WP_000085899.1;Name=WP_000085899.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AB69_RS04570;product=flavin reductase family protein;protein_id=WP_000085899.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 2095 2940 . + . ID=gene-AB69_RS04565;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AB69_RS04565;old_locus_tag=AB69_3829 NZ_JHDO01000113.1 Protein Homology CDS 2095 2940 . + 0 ID=cds-WP_000187925.1;Parent=gene-AB69_RS04565;Dbxref=GenBank:WP_000187925.1;Name=WP_000187925.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AB69_RS04565;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187925.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 3036 3929 . - . ID=gene-AB69_RS04560;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AB69_RS04560;old_locus_tag=AB69_3830 NZ_JHDO01000113.1 Protein Homology CDS 3036 3929 . - 0 ID=cds-WP_000804385.1;Parent=gene-AB69_RS04560;Dbxref=GenBank:WP_000804385.1;Name=WP_000804385.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415981.1;locus_tag=AB69_RS04560;product=PhzF family isomerase;protein_id=WP_000804385.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 4008 4688 . - . ID=gene-AB69_RS04555;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB69_RS04555;old_locus_tag=AB69_3831 NZ_JHDO01000113.1 Protein Homology CDS 4008 4688 . - 0 ID=cds-WP_000617115.1;Parent=gene-AB69_RS04555;Dbxref=GenBank:WP_000617115.1;Name=WP_000617115.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AB69_RS04555;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 4685 5380 . - . ID=gene-AB69_RS04550;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AB69_RS04550;old_locus_tag=AB69_3832 NZ_JHDO01000113.1 Protein Homology CDS 4685 5380 . - 0 ID=cds-WP_001166353.1;Parent=gene-AB69_RS04550;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AB69_RS04550;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 5380 6924 . - . ID=gene-AB69_RS04545;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB69_RS04545;old_locus_tag=AB69_3833 NZ_JHDO01000113.1 Protein Homology CDS 5380 6924 . - 0 ID=cds-WP_032231126.1;Parent=gene-AB69_RS04545;Dbxref=GenBank:WP_032231126.1;Name=WP_032231126.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415984.1;locus_tag=AB69_RS04545;product=nitrate reductase subunit beta;protein_id=WP_032231126.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 6921 10661 . - . ID=gene-AB69_RS04540;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AB69_RS04540;old_locus_tag=AB69_3834 NZ_JHDO01000113.1 Protein Homology CDS 6921 10661 . - 0 ID=cds-WP_000040458.1;Parent=gene-AB69_RS04540;Dbxref=GenBank:WP_000040458.1;Name=WP_000040458.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AB69_RS04540;product=nitrate reductase Z subunit alpha;protein_id=WP_000040458.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 10743 12131 . - . ID=gene-AB69_RS04535;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AB69_RS04535;old_locus_tag=AB69_3835 NZ_JHDO01000113.1 Protein Homology CDS 10743 12131 . - 0 ID=cds-WP_001207901.1;Parent=gene-AB69_RS04535;Dbxref=GenBank:WP_001207901.1;Name=WP_001207901.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AB69_RS04535;product=nitrate/nitrite transporter NarU;protein_id=WP_001207901.1;transl_table=11 NZ_JHDO01000113.1 RefSeq pseudogene 12455 13785 . - . ID=gene-AB69_RS0125195;Name=AB69_RS0125195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0125195;old_locus_tag=AB69_3836;pseudo=true NZ_JHDO01000113.1 Protein Homology CDS 12455 13785 . - 0 ID=cds-AB69_RS0125195;Parent=gene-AB69_RS0125195;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AB69_RS0125195;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000113.1 RefSeq pseudogene 13824 14099 . - . ID=gene-AB69_RS04530;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AB69_RS04530;old_locus_tag=AB69_3837;partial=true;pseudo=true;start_range=.,13824 NZ_JHDO01000113.1 Protein Homology CDS 13824 14099 . - 0 ID=cds-AB69_RS04530;Parent=gene-AB69_RS04530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AB69_RS04530;partial=true;product=porin;pseudo=true;start_range=.,13824;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 14359 15240 . - . ID=gene-AB69_RS04525;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AB69_RS04525;old_locus_tag=AB69_3838 NZ_JHDO01000113.1 Protein Homology CDS 14359 15240 . - 0 ID=cds-WP_000198205.1;Parent=gene-AB69_RS04525;Dbxref=GenBank:WP_000198205.1;Name=WP_000198205.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AB69_RS04525;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198205.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 15472 18519 . + . ID=gene-AB69_RS04515;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB69_RS04515;old_locus_tag=AB69_3841 NZ_JHDO01000113.1 Protein Homology CDS 15472 18519 . + 0 ID=cds-WP_014639908.1;Parent=gene-AB69_RS04515;Dbxref=GenBank:WP_014639908.1;Name=WP_014639908.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AB69_RS04515;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014639908.1;transl_except=(pos:16057..16059%2Caa:Sec);transl_table=11 NZ_JHDO01000113.1 RefSeq gene 18532 19416 . + . ID=gene-AB69_RS04510;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AB69_RS04510;old_locus_tag=AB69_3842 NZ_JHDO01000113.1 Protein Homology CDS 18532 19416 . + 0 ID=cds-WP_001240582.1;Parent=gene-AB69_RS04510;Dbxref=GenBank:WP_001240582.1;Name=WP_001240582.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AB69_RS04510;product=formate dehydrogenase N subunit beta;protein_id=WP_001240582.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 19409 20062 . + . ID=gene-AB69_RS04505;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AB69_RS04505;old_locus_tag=AB69_3843 NZ_JHDO01000113.1 Protein Homology CDS 19409 20062 . + 0 ID=cds-WP_000045648.1;Parent=gene-AB69_RS04505;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AB69_RS04505;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 21003 21287 . - . ID=gene-AB69_RS04500;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AB69_RS04500;old_locus_tag=AB69_3844 NZ_JHDO01000113.1 Protein Homology CDS 21003 21287 . - 0 ID=cds-WP_000781370.1;Parent=gene-AB69_RS04500;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AB69_RS04500;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 21433 22443 . - . ID=gene-AB69_RS04495;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AB69_RS04495;old_locus_tag=AB69_3845 NZ_JHDO01000113.1 Protein Homology CDS 21433 22443 . - 0 ID=cds-WP_000642433.1;Parent=gene-AB69_RS04495;Dbxref=GenBank:WP_000642433.1;Name=WP_000642433.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AB69_RS04495;product=alcohol dehydrogenase AdhP;protein_id=WP_000642433.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 22577 24274 . - . ID=gene-AB69_RS04490;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AB69_RS04490;old_locus_tag=AB69_3846 NZ_JHDO01000113.1 Protein Homology CDS 22577 24274 . - 0 ID=cds-WP_000433476.1;Parent=gene-AB69_RS04490;Dbxref=GenBank:WP_000433476.1;Name=WP_000433476.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415996.2;locus_tag=AB69_RS04490;product=malate dehydrogenase;protein_id=WP_000433476.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 24431 24568 . - . ID=gene-AB69_RS04485;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AB69_RS04485;old_locus_tag=AB69_3847 NZ_JHDO01000113.1 Protein Homology CDS 24431 24568 . - 0 ID=cds-WP_000841554.1;Parent=gene-AB69_RS04485;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AB69_RS04485;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 24670 24885 . - . ID=gene-AB69_RS04480;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AB69_RS04480;old_locus_tag=AB69_3848 NZ_JHDO01000113.1 Protein Homology CDS 24670 24885 . - 0 ID=cds-WP_000495771.1;Parent=gene-AB69_RS04480;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AB69_RS04480;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 25230 25661 . + . ID=gene-AB69_RS04475;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AB69_RS04475;old_locus_tag=AB69_3849 NZ_JHDO01000113.1 Protein Homology CDS 25230 25661 . + 0 ID=cds-WP_000152305.1;Parent=gene-AB69_RS04475;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AB69_RS04475;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 25717 26643 . - . ID=gene-AB69_RS04470;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AB69_RS04470;old_locus_tag=AB69_3850 NZ_JHDO01000113.1 Protein Homology CDS 25717 26643 . - 0 ID=cds-WP_001285536.1;Parent=gene-AB69_RS04470;Dbxref=GenBank:WP_001285536.1;Name=WP_001285536.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AB69_RS04470;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_001285536.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 26636 27622 . - . ID=gene-AB69_RS04465;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AB69_RS04465;old_locus_tag=AB69_3851 NZ_JHDO01000113.1 Protein Homology CDS 26636 27622 . - 0 ID=cds-WP_000193547.1;Parent=gene-AB69_RS04465;Dbxref=GenBank:WP_000193547.1;Name=WP_000193547.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AB69_RS04465;product=ABC transporter ATP-binding protein;protein_id=WP_000193547.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 27619 28515 . - . ID=gene-AB69_RS04460;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AB69_RS04460;old_locus_tag=AB69_3852 NZ_JHDO01000113.1 Protein Homology CDS 27619 28515 . - 0 ID=cds-WP_000979626.1;Parent=gene-AB69_RS04460;Dbxref=GenBank:WP_000979626.1;Name=WP_000979626.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416002.1;locus_tag=AB69_RS04460;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979626.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 28512 29534 . - . ID=gene-AB69_RS04455;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AB69_RS04455;old_locus_tag=AB69_3853 NZ_JHDO01000113.1 Protein Homology CDS 28512 29534 . - 0 ID=cds-WP_000145123.1;Parent=gene-AB69_RS04455;Dbxref=GenBank:WP_000145123.1;Name=WP_000145123.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AB69_RS04455;product=ABC transporter permease;protein_id=WP_000145123.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 29536 31086 . - . ID=gene-AB69_RS04450;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AB69_RS04450;old_locus_tag=AB69_3854 NZ_JHDO01000113.1 Protein Homology CDS 29536 31086 . - 0 ID=cds-WP_000830550.1;Parent=gene-AB69_RS04450;Dbxref=GenBank:WP_000830550.1;Name=WP_000830550.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416004.1;locus_tag=AB69_RS04450;product=ABC transporter substrate-binding protein;protein_id=WP_000830550.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 31100 31681 . - . ID=gene-AB69_RS04445;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AB69_RS04445;old_locus_tag=AB69_3855 NZ_JHDO01000113.1 Protein Homology CDS 31100 31681 . - 0 ID=cds-WP_001285833.1;Parent=gene-AB69_RS04445;Dbxref=GenBank:WP_001285833.1;Name=WP_001285833.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416005.1;locus_tag=AB69_RS04445;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285833.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 31939 34338 . - . ID=gene-AB69_RS04440;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AB69_RS04440;old_locus_tag=AB69_3856 NZ_JHDO01000113.1 Protein Homology CDS 31939 34338 . - 0 ID=cds-WP_001360132.1;Parent=gene-AB69_RS04440;Dbxref=GenBank:WP_001360132.1;Name=WP_001360132.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AB69_RS04440;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_001360132.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 34363 35745 . - . ID=gene-AB69_RS04435;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AB69_RS04435;old_locus_tag=AB69_3857 NZ_JHDO01000113.1 Protein Homology CDS 34363 35745 . - 0 ID=cds-WP_000426292.1;Parent=gene-AB69_RS04435;Dbxref=GenBank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AB69_RS04435;product=diguanylate cyclase DosC;protein_id=WP_000426292.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 36109 37428 . - . ID=gene-AB69_RS04430;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AB69_RS04430;old_locus_tag=AB69_3858 NZ_JHDO01000113.1 Protein Homology CDS 36109 37428 . - 0 ID=cds-WP_000350395.1;Parent=gene-AB69_RS04430;Dbxref=GenBank:WP_000350395.1;Name=WP_000350395.1;Ontology_term=GO:0016798;gbkey=CDS;gene=digH;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AB69_RS04430;product=family 10 glycosylhydrolase;protein_id=WP_000350395.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 37559 39094 . - . ID=gene-AB69_RS04425;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AB69_RS04425;old_locus_tag=AB69_3859 NZ_JHDO01000113.1 Protein Homology CDS 37559 39094 . - 0 ID=cds-WP_000246019.1;Parent=gene-AB69_RS04425;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AB69_RS04425;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 39250 40650 . - . ID=gene-AB69_RS04420;Name=AB69_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04420;old_locus_tag=AB69_3860 NZ_JHDO01000113.1 Protein Homology CDS 39250 40650 . - 0 ID=cds-WP_000372240.1;Parent=gene-AB69_RS04420;Dbxref=GenBank:WP_000372240.1;Name=WP_000372240.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=AB69_RS04420;product=glutamate decarboxylase;protein_id=WP_000372240.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 40861 42258 . - . ID=gene-AB69_RS04415;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AB69_RS04415;old_locus_tag=AB69_3861 NZ_JHDO01000113.1 Protein Homology CDS 40861 42258 . - 0 ID=cds-WP_000784827.1;Parent=gene-AB69_RS04415;Dbxref=GenBank:WP_000784827.1;Name=WP_000784827.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417975.1;locus_tag=AB69_RS04415;product=cytochrome c peroxidase;protein_id=WP_000784827.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 42662 44311 . + . ID=gene-AB69_RS04410;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AB69_RS04410;old_locus_tag=AB69_3863 NZ_JHDO01000113.1 Protein Homology CDS 42662 44311 . + 0 ID=cds-WP_000934216.1;Parent=gene-AB69_RS04410;Dbxref=GenBank:WP_000934216.1;Name=WP_000934216.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312426.1;locus_tag=AB69_RS04410;product=alpha%2Calpha-trehalase;protein_id=WP_000934216.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 44362 44964 . - . ID=gene-AB69_RS04405;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AB69_RS04405;old_locus_tag=AB69_3864 NZ_JHDO01000113.1 Protein Homology CDS 44362 44964 . - 0 ID=cds-WP_001167676.1;Parent=gene-AB69_RS04405;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AB69_RS04405;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 45484 46383 . + . ID=gene-AB69_RS04400;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AB69_RS04400;old_locus_tag=AB69_3865 NZ_JHDO01000113.1 Protein Homology CDS 45484 46383 . + 0 ID=cds-WP_000357790.1;Parent=gene-AB69_RS04400;Dbxref=GenBank:WP_000357790.1;Name=WP_000357790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AB69_RS04400;product=LysR family transcriptional regulator;protein_id=WP_000357790.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 46432 47445 . + . ID=gene-AB69_RS04395;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AB69_RS04395;old_locus_tag=AB69_3866 NZ_JHDO01000113.1 Protein Homology CDS 46432 47445 . + 0 ID=cds-WP_000191237.1;Parent=gene-AB69_RS04395;Dbxref=GenBank:WP_000191237.1;Name=WP_000191237.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417979.1;locus_tag=AB69_RS04395;product=inner membrane protein YhjD;protein_id=WP_000191237.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 47856 49178 . + . ID=gene-AB69_RS04390;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AB69_RS04390;old_locus_tag=AB69_3867 NZ_JHDO01000113.1 Protein Homology CDS 47856 49178 . + 0 ID=cds-WP_001149003.1;Parent=gene-AB69_RS04390;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AB69_RS04390;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 49360 51420 . - . ID=gene-AB69_RS04385;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AB69_RS04385;old_locus_tag=AB69_3868 NZ_JHDO01000113.1 Protein Homology CDS 49360 51420 . - 0 ID=cds-WP_001296794.1;Parent=gene-AB69_RS04385;Dbxref=GenBank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AB69_RS04385;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 51490 52257 . - . ID=gene-AB69_RS0125200;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AB69_RS0125200;old_locus_tag=AB69_3869 NZ_JHDO01000113.1 Protein Homology CDS 51490 52257 . - 0 ID=cds-WP_001295219.1;Parent=gene-AB69_RS0125200;Dbxref=GenBank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AB69_RS0125200;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 52489 53418 . + . ID=gene-AB69_RS04380;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AB69_RS04380;old_locus_tag=AB69_3871 NZ_JHDO01000113.1 Protein Homology CDS 52489 53418 . + 0 ID=cds-WP_000037562.1;Parent=gene-AB69_RS04380;Dbxref=GenBank:WP_000037562.1;Name=WP_000037562.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AB69_RS04380;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037562.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 53514 55010 . - . ID=gene-AB69_RS04375;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AB69_RS04375;old_locus_tag=AB69_3872 NZ_JHDO01000113.1 Protein Homology CDS 53514 55010 . - 0 ID=cds-WP_001163141.1;Parent=gene-AB69_RS04375;Dbxref=GenBank:WP_001163141.1;Name=WP_001163141.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417984.1;locus_tag=AB69_RS04375;product=M16 family metallopeptidase;protein_id=WP_001163141.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 55231 56517 . - . ID=gene-AB69_RS04370;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AB69_RS04370;old_locus_tag=AB69_3873 NZ_JHDO01000113.1 Protein Homology CDS 55231 56517 . - 0 ID=cds-WP_000858214.1;Parent=gene-AB69_RS04370;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AB69_RS04370;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 56700 58688 . - . ID=gene-AB69_RS04365;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AB69_RS04365;old_locus_tag=AB69_3875 NZ_JHDO01000113.1 Protein Homology CDS 56700 58688 . - 0 ID=cds-WP_001266293.1;Parent=gene-AB69_RS04365;Dbxref=GenBank:WP_001266293.1;Name=WP_001266293.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AB69_RS04365;product=biofilm formation regulator HmsP;protein_id=WP_001266293.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 58770 62243 . - . ID=gene-AB69_RS04360;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AB69_RS04360;old_locus_tag=AB69_3876 NZ_JHDO01000113.1 Protein Homology CDS 58770 62243 . - 0 ID=cds-WP_001225124.1;Parent=gene-AB69_RS04360;Dbxref=GenBank:WP_001225124.1;Name=WP_001225124.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AB69_RS04360;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225124.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 62225 63331 . - . ID=gene-AB69_RS04355;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AB69_RS04355;old_locus_tag=AB69_3877 NZ_JHDO01000113.1 Protein Homology CDS 62225 63331 . - 0 ID=cds-WP_001311203.1;Parent=gene-AB69_RS04355;Dbxref=GenBank:WP_001311203.1;Name=WP_001311203.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417988.1;locus_tag=AB69_RS04355;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001311203.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 63338 65677 . - . ID=gene-AB69_RS04350;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AB69_RS04350;old_locus_tag=AB69_3878 NZ_JHDO01000113.1 Protein Homology CDS 63338 65677 . - 0 ID=cds-WP_032231531.1;Parent=gene-AB69_RS04350;Dbxref=GenBank:WP_032231531.1;Name=WP_032231531.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AB69_RS04350;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032231531.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 65688 68306 . - . ID=gene-AB69_RS04345;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AB69_RS04345;old_locus_tag=AB69_3879 NZ_JHDO01000113.1 Protein Homology CDS 65688 68306 . - 0 ID=cds-WP_021568856.1;Parent=gene-AB69_RS04345;Dbxref=GenBank:WP_021568856.1;Name=WP_021568856.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AB69_RS04345;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_021568856.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 68303 69055 . - . ID=gene-AB69_RS04340;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AB69_RS04340;old_locus_tag=AB69_3880 NZ_JHDO01000113.1 Protein Homology CDS 68303 69055 . - 0 ID=cds-WP_000279528.1;Parent=gene-AB69_RS04340;Dbxref=GenBank:WP_000279528.1;Name=WP_000279528.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AB69_RS04340;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279528.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 69067 69255 . - . ID=gene-AB69_RS04335;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AB69_RS04335;old_locus_tag=AB69_3881 NZ_JHDO01000113.1 Protein Homology CDS 69067 69255 . - 0 ID=cds-WP_001063318.1;Parent=gene-AB69_RS04335;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AB69_RS04335;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11 NZ_JHDO01000113.1 RefSeq pseudogene 69528 71099 . + . ID=gene-AB69_RS04330;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=pseudogene;locus_tag=AB69_RS04330;old_locus_tag=AB69_3883;pseudo=true NZ_JHDO01000113.1 Protein Homology CDS 69528 71099 . + 0 ID=cds-AB69_RS04330;Parent=gene-AB69_RS04330;Note=internal stop;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AB69_RS04330;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;pseudo=true;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 71096 71287 . + . ID=gene-AB69_RS04325;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AB69_RS04325;old_locus_tag=AB69_3884 NZ_JHDO01000113.1 Protein Homology CDS 71096 71287 . + 0 ID=cds-WP_000988308.1;Parent=gene-AB69_RS04325;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AB69_RS04325;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 71284 72963 . + . ID=gene-AB69_RS04320;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AB69_RS04320;old_locus_tag=AB69_3885 NZ_JHDO01000113.1 Protein Homology CDS 71284 72963 . + 0 ID=cds-WP_000191622.1;Parent=gene-AB69_RS04320;Dbxref=GenBank:WP_000191622.1;Name=WP_000191622.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AB69_RS04320;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191622.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 73050 73157 . - . ID=gene-AB69_RS25685;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AB69_RS25685 NZ_JHDO01000113.1 Protein Homology CDS 73050 73157 . - 0 ID=cds-WP_000141634.1;Parent=gene-AB69_RS25685;Dbxref=GenBank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AB69_RS25685;product=type I toxin-antitoxin system toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 73633 74904 . + . ID=gene-AB69_RS04310;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AB69_RS04310;old_locus_tag=AB69_3888 NZ_JHDO01000113.1 Protein Homology CDS 73633 74904 . + 0 ID=cds-WP_001295225.1;Parent=gene-AB69_RS04310;Dbxref=GenBank:WP_001295225.1;Name=WP_001295225.1;Ontology_term=GO:0003333;gbkey=CDS;gene=yhjV;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AB69_RS04310;product=aromatic amino acid transport family protein;protein_id=WP_001295225.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 74934 75938 . - . ID=gene-AB69_RS04305;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AB69_RS04305;old_locus_tag=AB69_3889 NZ_JHDO01000113.1 Protein Homology CDS 74934 75938 . - 0 ID=cds-WP_000107012.1;Parent=gene-AB69_RS04305;Dbxref=GenBank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AB69_RS04305;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107012.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 75935 76918 . - . ID=gene-AB69_RS04300;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AB69_RS04300;old_locus_tag=AB69_3890 NZ_JHDO01000113.1 Protein Homology CDS 75935 76918 . - 0 ID=cds-WP_001394997.1;Parent=gene-AB69_RS04300;Dbxref=GenBank:WP_001394997.1;Name=WP_001394997.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AB69_RS04300;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001394997.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 76929 77831 . - . ID=gene-AB69_RS04295;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AB69_RS04295;old_locus_tag=AB69_3891 NZ_JHDO01000113.1 Protein Homology CDS 76929 77831 . - 0 ID=cds-WP_000084677.1;Parent=gene-AB69_RS04295;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AB69_RS04295;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 77841 78860 . - . ID=gene-AB69_RS04290;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AB69_RS04290;old_locus_tag=AB69_3892 NZ_JHDO01000113.1 Protein Homology CDS 77841 78860 . - 0 ID=cds-WP_000938855.1;Parent=gene-AB69_RS04290;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AB69_RS04290;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 79168 80775 . - . ID=gene-AB69_RS04285;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AB69_RS04285;old_locus_tag=AB69_3894 NZ_JHDO01000113.1 Protein Homology CDS 79168 80775 . - 0 ID=cds-WP_001222883.1;Parent=gene-AB69_RS04285;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AB69_RS04285;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 81518 81594 . - . ID=gene-AB69_RS04280;Name=AB69_RS04280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS04280;old_locus_tag=AB69_3896 NZ_JHDO01000113.1 tRNAscan-SE tRNA 81518 81594 . - . ID=rna-AB69_RS04280;Parent=gene-AB69_RS04280;anticodon=(pos:complement(81558..81560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS04280;product=tRNA-Pro NZ_JHDO01000113.1 tRNAscan-SE exon 81518 81594 . - . ID=exon-AB69_RS04280-1;Parent=rna-AB69_RS04280;anticodon=(pos:complement(81558..81560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS04280;product=tRNA-Pro NZ_JHDO01000113.1 RefSeq gene 81686 83377 . - . ID=gene-AB69_RS04275;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AB69_RS04275;old_locus_tag=AB69_3897 NZ_JHDO01000113.1 Protein Homology CDS 81686 83377 . - 0 ID=cds-WP_001269197.1;Parent=gene-AB69_RS04275;Dbxref=GenBank:WP_001269197.1;Name=WP_001269197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AB69_RS04275;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 83701 84909 . - . ID=gene-AB69_RS04270;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AB69_RS04270;old_locus_tag=AB69_3898 NZ_JHDO01000113.1 Protein Homology CDS 83701 84909 . - 0 ID=cds-WP_000189019.1;Parent=gene-AB69_RS04270;Dbxref=GenBank:WP_000189019.1;Name=WP_000189019.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AB69_RS04270;product=L-lactate MFS transporter;protein_id=WP_000189019.1;transl_table=11 NZ_JHDO01000113.1 RefSeq pseudogene 85138 85880 . - . ID=gene-AB69_RS0125225;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=pseudogene;locus_tag=AB69_RS0125225;pseudo=true NZ_JHDO01000113.1 Protein Homology CDS 85138 85880 . - 0 ID=cds-AB69_RS0125225;Parent=gene-AB69_RS0125225;Note=frameshifted;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005138085.1;locus_tag=AB69_RS0125225;product=autotransporter domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 85992 86555 . + . ID=gene-AB69_RS04265;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AB69_RS04265;old_locus_tag=AB69_3901 NZ_JHDO01000113.1 Protein Homology CDS 85992 86555 . + 0 ID=cds-WP_000438957.1;Parent=gene-AB69_RS04265;Dbxref=GenBank:WP_000438957.1;Name=WP_000438957.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AB69_RS04265;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438957.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 86552 86992 . + . ID=gene-AB69_RS04260;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AB69_RS04260;old_locus_tag=AB69_3902 NZ_JHDO01000113.1 Protein Homology CDS 86552 86992 . + 0 ID=cds-WP_000617473.1;Parent=gene-AB69_RS04260;Dbxref=GenBank:WP_000617473.1;Name=WP_000617473.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418006.1;locus_tag=AB69_RS04260;product=N-acetyltransferase;protein_id=WP_000617473.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 86961 89294 . - . ID=gene-AB69_RS04255;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AB69_RS04255;old_locus_tag=AB69_3903 NZ_JHDO01000113.1 Protein Homology CDS 86961 89294 . - 0 ID=cds-WP_071996092.1;Parent=gene-AB69_RS04255;Dbxref=GenBank:WP_071996092.1;Name=WP_071996092.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AB69_RS04255;product=biotin sulfoxide reductase;protein_id=WP_071996092.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 89447 90106 . + . ID=gene-AB69_RS04250;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AB69_RS04250;old_locus_tag=AB69_3904 NZ_JHDO01000113.1 Protein Homology CDS 89447 90106 . + 0 ID=cds-WP_000747625.1;Parent=gene-AB69_RS04250;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AB69_RS04250;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 90210 91184 . + . ID=gene-AB69_RS04245;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AB69_RS04245;old_locus_tag=AB69_3905 NZ_JHDO01000113.1 Protein Homology CDS 90210 91184 . + 0 ID=cds-WP_000805038.1;Parent=gene-AB69_RS04245;Dbxref=GenBank:WP_000805038.1;Name=WP_000805038.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418009.2;locus_tag=AB69_RS04245;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805038.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 91234 91944 . - . ID=gene-AB69_RS04240;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AB69_RS04240;old_locus_tag=AB69_3906 NZ_JHDO01000113.1 Protein Homology CDS 91234 91944 . - 0 ID=cds-WP_000190516.1;Parent=gene-AB69_RS04240;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AB69_RS04240;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 92378 92668 . + . ID=gene-AB69_RS04235;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AB69_RS04235;old_locus_tag=AB69_3907 NZ_JHDO01000113.1 Protein Homology CDS 92378 92668 . + 0 ID=cds-WP_000455798.1;Parent=gene-AB69_RS04235;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AB69_RS04235;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 92949 93161 . + . ID=gene-AB69_RS04230;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB69_RS04230;old_locus_tag=AB69_3908 NZ_JHDO01000113.1 Protein Homology CDS 92949 93161 . + 0 ID=cds-WP_000014594.1;Parent=gene-AB69_RS04230;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AB69_RS04230;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 93300 93371 . + . ID=gene-AB69_RS30450;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=AB69_RS30450 NZ_JHDO01000113.1 Protein Homology CDS 93300 93371 . + 0 ID=cds-WP_211180513.1;Parent=gene-AB69_RS30450;Dbxref=GenBank:WP_211180513.1;Name=WP_211180513.1;gbkey=CDS;gene=ysaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AB69_RS30450;product=protein YsaE;protein_id=WP_211180513.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 93348 93500 . - . ID=gene-AB69_RS04225;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AB69_RS04225;old_locus_tag=AB69_3909 NZ_JHDO01000113.1 Protein Homology CDS 93348 93500 . - 0 ID=cds-WP_001135732.1;Parent=gene-AB69_RS04225;Dbxref=GenBank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AB69_RS04225;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11 NZ_JHDO01000113.1 RefSeq gene 93580 94949 . + . ID=gene-AB69_RS28960;Name=AB69_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28960 NZ_JHDO01000113.1 Protein Homology CDS 93580 94060 . + 0 ID=cds-WP_085947770.1-2;Parent=gene-AB69_RS28960;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS28960;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDO01000113.1 Protein Homology CDS 94060 94949 . + 2 ID=cds-WP_085947770.1-2;Parent=gene-AB69_RS28960;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS28960;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 ##sequence-region NZ_JHDO01000114.1 1 883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000114.1 RefSeq region 1 883 . + . ID=NZ_JHDO01000114.1:1..883;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000114.1 RefSeq gene 76 183 . - . ID=gene-AB69_RS04215;Name=AB69_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04215;old_locus_tag=AB69_3912 NZ_JHDO01000114.1 Protein Homology CDS 76 183 . - 0 ID=cds-WP_000170955.1-2;Parent=gene-AB69_RS04215;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AB69_RS04215;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 NZ_JHDO01000114.1 RefSeq gene 611 718 . - . ID=gene-AB69_RS04210;Name=AB69_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04210;old_locus_tag=AB69_3913 NZ_JHDO01000114.1 Protein Homology CDS 611 718 . - 0 ID=cds-WP_000170963.1;Parent=gene-AB69_RS04210;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AB69_RS04210;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 ##sequence-region NZ_JHDO01000115.1 1 4727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000115.1 RefSeq region 1 4727 . + . ID=NZ_JHDO01000115.1:1..4727;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000115.1 RefSeq gene 1 741 . + . ID=gene-AB69_RS30455;Name=AB69_RS30455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30455;partial=true;start_range=.,1 NZ_JHDO01000115.1 Protein Homology CDS 1 741 . + 0 ID=cds-WP_032231536.1;Parent=gene-AB69_RS30455;Dbxref=GenBank:WP_032231536.1;Name=WP_032231536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763155.1;locus_tag=AB69_RS30455;partial=true;product=phage replisome organizer;protein_id=WP_032231536.1;start_range=.,1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 782 1204 . + . ID=gene-AB69_RS04205;Name=AB69_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04205;old_locus_tag=AB69_3915 NZ_JHDO01000115.1 Protein Homology CDS 782 1204 . + 0 ID=cds-WP_032231537.1;Parent=gene-AB69_RS04205;Dbxref=GenBank:WP_032231537.1;Name=WP_032231537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151247.1;locus_tag=AB69_RS04205;product=DUF977 family protein;protein_id=WP_032231537.1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 1201 1497 . + . ID=gene-AB69_RS04200;Name=AB69_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04200;old_locus_tag=AB69_3916 NZ_JHDO01000115.1 Protein Homology CDS 1201 1497 . + 0 ID=cds-WP_001266148.1;Parent=gene-AB69_RS04200;Dbxref=GenBank:WP_001266148.1;Name=WP_001266148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266128.1;locus_tag=AB69_RS04200;product=DUF4406 domain-containing protein;protein_id=WP_001266148.1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 1494 1778 . + . ID=gene-AB69_RS04195;Name=AB69_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04195;old_locus_tag=AB69_3917 NZ_JHDO01000115.1 Protein Homology CDS 1494 1778 . + 0 ID=cds-WP_001017773.1;Parent=gene-AB69_RS04195;Dbxref=GenBank:WP_001017773.1;Name=WP_001017773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024844.1;locus_tag=AB69_RS04195;product=DUF4752 family protein;protein_id=WP_001017773.1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 1878 2090 . + . ID=gene-AB69_RS04190;Name=AB69_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04190;old_locus_tag=AB69_3918 NZ_JHDO01000115.1 Protein Homology CDS 1878 2090 . + 0 ID=cds-WP_032231538.1;Parent=gene-AB69_RS04190;Dbxref=GenBank:WP_032231538.1;Name=WP_032231538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309976.1;locus_tag=AB69_RS04190;product=hypothetical protein;protein_id=WP_032231538.1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 2129 2683 . - . ID=gene-AB69_RS04185;Name=AB69_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04185;old_locus_tag=AB69_3919 NZ_JHDO01000115.1 Protein Homology CDS 2129 2683 . - 0 ID=cds-WP_001033793.1;Parent=gene-AB69_RS04185;Dbxref=GenBank:WP_001033793.1;Name=WP_001033793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033793.1;locus_tag=AB69_RS04185;product=hypothetical protein;protein_id=WP_001033793.1;transl_table=11 NZ_JHDO01000115.1 RefSeq gene 2680 3612 . - . ID=gene-AB69_RS04180;Name=AB69_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04180;old_locus_tag=AB69_3920 NZ_JHDO01000115.1 Protein Homology CDS 2680 3612 . - 0 ID=cds-WP_032231540.1;Parent=gene-AB69_RS04180;Dbxref=GenBank:WP_032231540.1;Name=WP_032231540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001705938.1;locus_tag=AB69_RS04180;product=hypothetical protein;protein_id=WP_032231540.1;transl_table=11 NZ_JHDO01000115.1 RefSeq pseudogene 3995 4727 . + . ID=gene-AB69_RS04175;Name=AB69_RS04175;end_range=4727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS04175;old_locus_tag=AB69_3921;partial=true;pseudo=true NZ_JHDO01000115.1 Protein Homology CDS 3995 4727 . + 0 ID=cds-AB69_RS04175;Parent=gene-AB69_RS04175;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4727,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS04175;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000116.1 1 40988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000116.1 RefSeq region 1 40988 . + . ID=NZ_JHDO01000116.1:1..40988;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000116.1 RefSeq pseudogene 1 587 . + . ID=gene-AB69_RS0125240;Name=AB69_RS0125240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0125240;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000116.1 Protein Homology CDS 1 587 . + 2 ID=cds-AB69_RS0125240;Parent=gene-AB69_RS0125240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB69_RS0125240;partial=true;product=IS3-like element IS150 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 866 2935 . - . ID=gene-AB69_RS04170;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AB69_RS04170;old_locus_tag=AB69_3923 NZ_JHDO01000116.1 Protein Homology CDS 866 2935 . - 0 ID=cds-WP_001291772.1;Parent=gene-AB69_RS04170;Dbxref=GenBank:WP_001291772.1;Name=WP_001291772.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AB69_RS04170;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 2945 3856 . - . ID=gene-AB69_RS04165;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AB69_RS04165;old_locus_tag=AB69_3924 NZ_JHDO01000116.1 Protein Homology CDS 2945 3856 . - 0 ID=cds-WP_001168544.1;Parent=gene-AB69_RS04165;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AB69_RS04165;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 3951 4250 . - . ID=gene-AB69_RS04160;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AB69_RS04160;old_locus_tag=AB69_3925 NZ_JHDO01000116.1 Protein Homology CDS 3951 4250 . - 0 ID=cds-WP_000980107.1;Parent=gene-AB69_RS04160;Dbxref=GenBank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AB69_RS04160;product=YsaB family lipoprotein;protein_id=WP_000980107.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 4425 5420 . + . ID=gene-AB69_RS04155;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AB69_RS04155;old_locus_tag=AB69_3926 NZ_JHDO01000116.1 Protein Homology CDS 4425 5420 . + 0 ID=cds-WP_001182650.1;Parent=gene-AB69_RS04155;Dbxref=GenBank:WP_001182650.1;Name=WP_001182650.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418018.1;locus_tag=AB69_RS04155;product=O-acetyltransferase WecH;protein_id=WP_001182650.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 5462 5899 . - . ID=gene-AB69_RS04150;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AB69_RS04150;old_locus_tag=AB69_3927 NZ_JHDO01000116.1 Protein Homology CDS 5462 5899 . - 0 ID=cds-WP_001296808.1;Parent=gene-AB69_RS04150;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AB69_RS04150;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 5945 6286 . - . ID=gene-AB69_RS04145;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AB69_RS04145;old_locus_tag=AB69_3928 NZ_JHDO01000116.1 Protein Homology CDS 5945 6286 . - 0 ID=cds-WP_001295228.1;Parent=gene-AB69_RS04145;Dbxref=GenBank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AB69_RS04145;product=inner membrane protein YiaB;protein_id=WP_001295228.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 6455 7909 . - . ID=gene-AB69_RS04140;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AB69_RS04140;old_locus_tag=AB69_3929 NZ_JHDO01000116.1 Protein Homology CDS 6455 7909 . - 0 ID=cds-WP_000275334.1;Parent=gene-AB69_RS04140;Dbxref=GenBank:WP_000275334.1;Name=WP_000275334.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AB69_RS04140;product=xylulokinase;protein_id=WP_000275334.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 7981 9303 . - . ID=gene-AB69_RS04135;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AB69_RS04135;old_locus_tag=AB69_3930 NZ_JHDO01000116.1 Protein Homology CDS 7981 9303 . - 0 ID=cds-WP_001149591.1;Parent=gene-AB69_RS04135;Dbxref=GenBank:WP_001149591.1;Name=WP_001149591.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418022.1;locus_tag=AB69_RS04135;product=xylose isomerase;protein_id=WP_001149591.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 9669 10661 . + . ID=gene-AB69_RS04130;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AB69_RS04130;old_locus_tag=AB69_3931 NZ_JHDO01000116.1 Protein Homology CDS 9669 10661 . + 0 ID=cds-WP_032231545.1;Parent=gene-AB69_RS04130;Dbxref=GenBank:WP_032231545.1;Name=WP_032231545.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AB69_RS04130;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_032231545.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 10739 12280 . + . ID=gene-AB69_RS04125;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AB69_RS04125;old_locus_tag=AB69_3932 NZ_JHDO01000116.1 Protein Homology CDS 10739 12280 . + 0 ID=cds-WP_001146479.1;Parent=gene-AB69_RS04125;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AB69_RS04125;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 12258 13439 . + . ID=gene-AB69_RS04120;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AB69_RS04120;old_locus_tag=AB69_3933 NZ_JHDO01000116.1 Protein Homology CDS 12258 13439 . + 0 ID=cds-WP_000045978.1;Parent=gene-AB69_RS04120;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AB69_RS04120;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 13517 14695 . + . ID=gene-AB69_RS04115;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AB69_RS04115;old_locus_tag=AB69_3934 NZ_JHDO01000116.1 Protein Homology CDS 13517 14695 . + 0 ID=cds-WP_000494484.1;Parent=gene-AB69_RS04115;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AB69_RS04115;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 14891 15715 . - . ID=gene-AB69_RS0125245;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AB69_RS0125245;old_locus_tag=AB69_3935 NZ_JHDO01000116.1 Protein Homology CDS 14891 15715 . - 0 ID=cds-WP_001297957.1;Parent=gene-AB69_RS0125245;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AB69_RS0125245;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 16035 18065 . + . ID=gene-AB69_RS04110;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AB69_RS04110;old_locus_tag=AB69_3936 NZ_JHDO01000116.1 Protein Homology CDS 16035 18065 . + 0 ID=cds-WP_000761225.1;Parent=gene-AB69_RS04110;Dbxref=GenBank:WP_000761225.1;Name=WP_000761225.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AB69_RS04110;product=alpha-amylase;protein_id=WP_000761225.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 18243 19496 . + . ID=gene-AB69_RS04105;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AB69_RS04105;old_locus_tag=AB69_3937 NZ_JHDO01000116.1 Protein Homology CDS 18243 19496 . + 0 ID=cds-WP_000144361.1;Parent=gene-AB69_RS04105;Dbxref=GenBank:WP_000144361.1;Name=WP_000144361.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AB69_RS04105;product=valine--pyruvate transaminase;protein_id=WP_000144361.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 19647 20120 . - . ID=gene-AB69_RS04100;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AB69_RS04100;old_locus_tag=AB69_3938 NZ_JHDO01000116.1 Protein Homology CDS 19647 20120 . - 0 ID=cds-WP_001300918.1;Parent=gene-AB69_RS04100;Dbxref=GenBank:WP_001300918.1;Name=WP_001300918.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418030.1;locus_tag=AB69_RS04100;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001300918.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 20222 21070 . - . ID=gene-AB69_RS04095;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AB69_RS04095;old_locus_tag=AB69_3939 NZ_JHDO01000116.1 Protein Homology CDS 20222 21070 . - 0 ID=cds-WP_000514240.1;Parent=gene-AB69_RS04095;Dbxref=GenBank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AB69_RS04095;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514240.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 21271 22269 . + . ID=gene-AB69_RS04090;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AB69_RS04090;old_locus_tag=AB69_3940 NZ_JHDO01000116.1 Protein Homology CDS 21271 22269 . + 0 ID=cds-WP_000869037.1;Parent=gene-AB69_RS04090;Dbxref=GenBank:WP_000869037.1;Name=WP_000869037.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418032.1;locus_tag=AB69_RS04090;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869037.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 22281 22748 . + . ID=gene-AB69_RS04085;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AB69_RS04085;old_locus_tag=AB69_3941 NZ_JHDO01000116.1 Protein Homology CDS 22281 22748 . + 0 ID=cds-WP_000576079.1;Parent=gene-AB69_RS04085;Dbxref=GenBank:WP_000576079.1;Name=WP_000576079.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AB69_RS04085;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576079.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 22866 23339 . + . ID=gene-AB69_RS04080;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AB69_RS04080;old_locus_tag=AB69_3942 NZ_JHDO01000116.1 Protein Homology CDS 22866 23339 . + 0 ID=cds-WP_000721664.1;Parent=gene-AB69_RS04080;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AB69_RS04080;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 23342 24619 . + . ID=gene-AB69_RS04075;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AB69_RS04075;old_locus_tag=AB69_3943 NZ_JHDO01000116.1 Protein Homology CDS 23342 24619 . + 0 ID=cds-WP_032231547.1;Parent=gene-AB69_RS04075;Dbxref=GenBank:WP_032231547.1;Name=WP_032231547.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AB69_RS04075;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_032231547.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 24632 25618 . + . ID=gene-AB69_RS04070;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AB69_RS04070;old_locus_tag=AB69_3944 NZ_JHDO01000116.1 Protein Homology CDS 24632 25618 . + 0 ID=cds-WP_032231548.1;Parent=gene-AB69_RS04070;Dbxref=GenBank:WP_032231548.1;Name=WP_032231548.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AB69_RS04070;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_032231548.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 25622 27118 . + . ID=gene-AB69_RS04065;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AB69_RS04065;old_locus_tag=AB69_3945 NZ_JHDO01000116.1 Protein Homology CDS 25622 27118 . + 0 ID=cds-WP_000196054.1;Parent=gene-AB69_RS04065;Dbxref=GenBank:WP_000196054.1;Name=WP_000196054.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AB69_RS04065;product=L-xylulokinase;protein_id=WP_000196054.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 27115 27777 . + . ID=gene-AB69_RS04060;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB69_RS04060;old_locus_tag=AB69_3946 NZ_JHDO01000116.1 Protein Homology CDS 27115 27777 . + 0 ID=cds-WP_000089481.1;Parent=gene-AB69_RS04060;Dbxref=GenBank:WP_000089481.1;Name=WP_000089481.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AB69_RS04060;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089481.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 27770 28630 . + . ID=gene-AB69_RS04055;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AB69_RS04055;old_locus_tag=AB69_3947 NZ_JHDO01000116.1 Protein Homology CDS 27770 28630 . + 0 ID=cds-WP_001295230.1;Parent=gene-AB69_RS04055;Dbxref=GenBank:WP_001295230.1;Name=WP_001295230.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AB69_RS04055;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001295230.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 28624 29319 . + . ID=gene-AB69_RS04050;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB69_RS04050;old_locus_tag=AB69_3948 NZ_JHDO01000116.1 Protein Homology CDS 28624 29319 . + 0 ID=cds-WP_000893142.1;Parent=gene-AB69_RS04050;Dbxref=GenBank:WP_000893142.1;Name=WP_000893142.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AB69_RS04050;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893142.1;transl_table=11 NZ_JHDO01000116.1 RefSeq pseudogene 29351 29452 . - . ID=gene-AB69_RS30050;Name=AB69_RS30050;end_range=29452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30050;partial=true;pseudo=true NZ_JHDO01000116.1 Protein Homology CDS 29351 29452 . - 0 ID=cds-AB69_RS30050;Parent=gene-AB69_RS30050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AB69_RS30050;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDO01000116.1 RefSeq pseudogene 29456 29644 . + . ID=gene-AB69_RS29530;Name=AB69_RS29530;end_range=29644,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29530;partial=true;pseudo=true;start_range=.,29456 NZ_JHDO01000116.1 Protein Homology CDS 29456 29644 . + 0 ID=cds-AB69_RS29530;Parent=gene-AB69_RS29530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=29644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AB69_RS29530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,29456;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 29666 30406 . - . ID=gene-AB69_RS04045;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AB69_RS04045;old_locus_tag=AB69_3949 NZ_JHDO01000116.1 Protein Homology CDS 29666 30406 . - 0 ID=cds-WP_000906819.1;Parent=gene-AB69_RS04045;Dbxref=GenBank:WP_000906819.1;Name=WP_000906819.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418041.1;locus_tag=AB69_RS04045;product=MipA/OmpV family protein;protein_id=WP_000906819.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 30530 31504 . + . ID=gene-AB69_RS04040;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AB69_RS04040;old_locus_tag=AB69_3950 NZ_JHDO01000116.1 Protein Homology CDS 30530 31504 . + 0 ID=cds-WP_000164036.1;Parent=gene-AB69_RS04040;Dbxref=GenBank:WP_000164036.1;Name=WP_000164036.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=AB69_RS04040;product=LysR family transcriptional regulator;protein_id=WP_000164036.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 31501 32637 . - . ID=gene-AB69_RS04035;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AB69_RS04035;old_locus_tag=AB69_3951 NZ_JHDO01000116.1 Protein Homology CDS 31501 32637 . - 0 ID=cds-WP_000364884.1;Parent=gene-AB69_RS04035;Dbxref=GenBank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AB69_RS04035;product=HlyD family secretion protein;protein_id=WP_000364884.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 32643 32966 . - . ID=gene-AB69_RS04030;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AB69_RS04030;old_locus_tag=AB69_3952 NZ_JHDO01000116.1 Protein Homology CDS 32643 32966 . - 0 ID=cds-WP_000478195.1;Parent=gene-AB69_RS04030;Dbxref=GenBank:WP_000478195.1;Name=WP_000478195.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AB69_RS04030;product=DUF3302 domain-containing protein;protein_id=WP_000478195.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 33149 33292 . + . ID=gene-AB69_RS04025;Name=AB69_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS04025;old_locus_tag=AB69_3953 NZ_JHDO01000116.1 GeneMarkS-2+ CDS 33149 33292 . + 0 ID=cds-WP_001066080.1;Parent=gene-AB69_RS04025;Dbxref=GenBank:WP_001066080.1;Name=WP_001066080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS04025;product=hypothetical protein;protein_id=WP_001066080.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 33511 35049 . - . ID=gene-AB69_RS04020;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AB69_RS04020;old_locus_tag=AB69_3954 NZ_JHDO01000116.1 Protein Homology CDS 33511 35049 . - 0 ID=cds-WP_000183980.1;Parent=gene-AB69_RS04020;Dbxref=GenBank:WP_000183980.1;Name=WP_000183980.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AB69_RS04020;product=aldehyde dehydrogenase AldB;protein_id=WP_000183980.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 35214 36365 . - . ID=gene-AB69_RS04015;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AB69_RS04015;old_locus_tag=AB69_3955 NZ_JHDO01000116.1 Protein Homology CDS 35214 36365 . - 0 ID=cds-WP_000741518.1;Parent=gene-AB69_RS04015;Dbxref=GenBank:WP_000741518.1;Name=WP_000741518.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=AB69_RS04015;product=L-threonine dehydrogenase;protein_id=WP_000741518.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 36555 38399 . - . ID=gene-AB69_RS04010;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AB69_RS04010;old_locus_tag=AB69_3956 NZ_JHDO01000116.1 Protein Homology CDS 36555 38399 . - 0 ID=cds-WP_000582468.1;Parent=gene-AB69_RS04010;Dbxref=GenBank:WP_000582468.1;Name=WP_000582468.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AB69_RS04010;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582468.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 38396 39787 . - . ID=gene-AB69_RS04005;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AB69_RS04005;old_locus_tag=AB69_3957 NZ_JHDO01000116.1 Protein Homology CDS 38396 39787 . - 0 ID=cds-WP_000206275.1;Parent=gene-AB69_RS04005;Dbxref=GenBank:WP_000206275.1;Name=WP_000206275.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AB69_RS04005;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 39885 40493 . - . ID=gene-AB69_RS04000;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AB69_RS04000;old_locus_tag=AB69_3958 NZ_JHDO01000116.1 Protein Homology CDS 39885 40493 . - 0 ID=cds-WP_032231549.1;Parent=gene-AB69_RS04000;Dbxref=GenBank:WP_032231549.1;Name=WP_032231549.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AB69_RS04000;product=glutathione S-transferase;protein_id=WP_032231549.1;transl_table=11 NZ_JHDO01000116.1 RefSeq gene 40721 40988 . + . ID=gene-AB69_RS03995;Name=AB69_RS03995;end_range=40988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS03995;old_locus_tag=AB69_3960;partial=true NZ_JHDO01000116.1 Protein Homology CDS 40721 40988 . + 0 ID=cds-WP_000015121.1;Parent=gene-AB69_RS03995;Dbxref=GenBank:WP_000015121.1;Name=WP_000015121.1;end_range=40988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB69_RS03995;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_000015121.1;transl_table=11 ##sequence-region NZ_JHDO01000117.1 1 1467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000117.1 RefSeq region 1 1467 . + . ID=NZ_JHDO01000117.1:1..1467;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000117.1 RefSeq gene 1 864 . + . ID=gene-AB69_RS0125255;Name=AB69_RS0125255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS0125255;old_locus_tag=AB69_3961;partial=true;start_range=.,1 NZ_JHDO01000117.1 Protein Homology CDS 1 864 . + 0 ID=cds-WP_248785140.1;Parent=gene-AB69_RS0125255;Dbxref=GenBank:WP_248785140.1;Name=WP_248785140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AB69_RS0125255;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_248785140.1;start_range=.,1;transl_table=11 NZ_JHDO01000117.1 RefSeq gene 864 1190 . + . ID=gene-AB69_RS0125260;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;locus_tag=AB69_RS0125260 NZ_JHDO01000117.1 Protein Homology CDS 864 1190 . + 0 ID=cds-WP_000873944.1;Parent=gene-AB69_RS0125260;Dbxref=GenBank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AB69_RS0125260;product=protein YbfB;protein_id=WP_000873944.1;transl_table=11 NZ_JHDO01000117.1 RefSeq pseudogene 1221 1467 . + . ID=gene-AB69_RS27825;Name=AB69_RS27825;end_range=1467,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS27825;old_locus_tag=AB69_3962;partial=true;pseudo=true;start_range=.,1221 NZ_JHDO01000117.1 Protein Homology CDS 1221 1467 . + 0 ID=cds-AB69_RS27825;Parent=gene-AB69_RS27825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB69_RS27825;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1221;transl_table=11 ##sequence-region NZ_JHDO01000118.1 1 127771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000118.1 RefSeq region 1 127771 . + . ID=NZ_JHDO01000118.1:1..127771;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000118.1 RefSeq pseudogene 1 515 . + . ID=gene-AB69_RS03990;Name=AB69_RS03990;end_range=515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS03990;old_locus_tag=AB69_3963;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000118.1 Protein Homology CDS 1 515 . + 2 ID=cds-AB69_RS03990;Parent=gene-AB69_RS03990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB69_RS03990;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000118.1 RefSeq pseudogene 947 1468 . + . ID=gene-AB69_RS30460;Name=AB69_RS30460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30460;pseudo=true NZ_JHDO01000118.1 Protein Homology CDS 947 1468 . + 0 ID=cds-AB69_RS30460;Parent=gene-AB69_RS30460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AB69_RS30460;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 1928 3064 . - . ID=gene-AB69_RS03985;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AB69_RS03985;old_locus_tag=AB69_3965 NZ_JHDO01000118.1 Protein Homology CDS 1928 3064 . - 0 ID=cds-WP_000364939.1;Parent=gene-AB69_RS03985;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AB69_RS03985;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 3067 3429 . - . ID=gene-AB69_RS03980;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AB69_RS03980;old_locus_tag=AB69_3966 NZ_JHDO01000118.1 Protein Homology CDS 3067 3429 . - 0 ID=cds-WP_000479624.1;Parent=gene-AB69_RS03980;Dbxref=GenBank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=AB69_RS03980;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 3966 5879 . + . ID=gene-AB69_RS03975;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AB69_RS03975;old_locus_tag=AB69_3967 NZ_JHDO01000118.1 Protein Homology CDS 3966 5879 . + 0 ID=cds-WP_000093247.1;Parent=gene-AB69_RS03975;Dbxref=GenBank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=AB69_RS03975;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 6109 7257 . + . ID=gene-AB69_RS03970;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AB69_RS03970;old_locus_tag=AB69_3968 NZ_JHDO01000118.1 Protein Homology CDS 6109 7257 . + 0 ID=cds-WP_000645420.1;Parent=gene-AB69_RS03970;Dbxref=GenBank:WP_000645420.1;Name=WP_000645420.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AB69_RS03970;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645420.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 7257 7844 . + . ID=gene-AB69_RS03965;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AB69_RS03965;old_locus_tag=AB69_3969 NZ_JHDO01000118.1 Protein Homology CDS 7257 7844 . + 0 ID=cds-WP_000228269.1;Parent=gene-AB69_RS03965;Dbxref=GenBank:WP_000228269.1;Name=WP_000228269.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AB69_RS03965;product=mannitol operon repressor MtlR;protein_id=WP_000228269.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 7856 8065 . - . ID=gene-AB69_RS03960;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AB69_RS03960;old_locus_tag=AB69_3970 NZ_JHDO01000118.1 Protein Homology CDS 7856 8065 . - 0 ID=cds-WP_000517100.1;Parent=gene-AB69_RS03960;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AB69_RS03960;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 8350 8712 . + . ID=gene-AB69_RS03955;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AB69_RS03955;old_locus_tag=AB69_3971 NZ_JHDO01000118.1 Protein Homology CDS 8350 8712 . + 0 ID=cds-WP_000665680.1;Parent=gene-AB69_RS03955;Dbxref=GenBank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AB69_RS03955;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 9086 10741 . + . ID=gene-AB69_RS03950;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AB69_RS03950;old_locus_tag=AB69_3972 NZ_JHDO01000118.1 Protein Homology CDS 9086 10741 . + 0 ID=cds-WP_001297977.1;Parent=gene-AB69_RS03950;Dbxref=GenBank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AB69_RS03950;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 10741 11517 . + . ID=gene-AB69_RS03945;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AB69_RS03945;old_locus_tag=AB69_3973 NZ_JHDO01000118.1 Protein Homology CDS 10741 11517 . + 0 ID=cds-WP_000636500.1;Parent=gene-AB69_RS03945;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AB69_RS03945;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 11514 12704 . + . ID=gene-AB69_RS03940;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AB69_RS03940;old_locus_tag=AB69_3974 NZ_JHDO01000118.1 Protein Homology CDS 11514 12704 . + 0 ID=cds-WP_000586962.1;Parent=gene-AB69_RS03940;Dbxref=GenBank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AB69_RS03940;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 12902 13375 . + . ID=gene-AB69_RS03935;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AB69_RS03935;old_locus_tag=AB69_3975 NZ_JHDO01000118.1 Protein Homology CDS 12902 13375 . + 0 ID=cds-WP_000932347.1-2;Parent=gene-AB69_RS03935;Dbxref=GenBank:WP_000932347.1;Name=WP_000932347.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418063.1;locus_tag=AB69_RS03935;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932347.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 13428 14249 . - . ID=gene-AB69_RS03930;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AB69_RS03930;old_locus_tag=AB69_3976 NZ_JHDO01000118.1 Protein Homology CDS 13428 14249 . - 0 ID=cds-WP_001277561.1;Parent=gene-AB69_RS03930;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AB69_RS03930;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 14329 15348 . - . ID=gene-AB69_RS03925;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AB69_RS03925;old_locus_tag=AB69_3977 NZ_JHDO01000118.1 Protein Homology CDS 14329 15348 . - 0 ID=cds-WP_001076194.1;Parent=gene-AB69_RS03925;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AB69_RS03925;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 15348 15815 . - . ID=gene-AB69_RS03920;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AB69_RS03920;old_locus_tag=AB69_3978 NZ_JHDO01000118.1 Protein Homology CDS 15348 15815 . - 0 ID=cds-WP_000003377.1;Parent=gene-AB69_RS03920;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AB69_RS03920;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 15878 16129 . - . ID=gene-AB69_RS03915;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AB69_RS03915;old_locus_tag=AB69_3979 NZ_JHDO01000118.1 Protein Homology CDS 15878 16129 . - 0 ID=cds-WP_000024392.1;Parent=gene-AB69_RS03915;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AB69_RS03915;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 16271 16702 . - . ID=gene-AB69_RS03910;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AB69_RS03910;old_locus_tag=AB69_3980 NZ_JHDO01000118.1 Protein Homology CDS 16271 16702 . - 0 ID=cds-WP_001156181.1;Parent=gene-AB69_RS03910;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AB69_RS03910;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 16947 18491 . + . ID=gene-AB69_RS03905;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AB69_RS03905;old_locus_tag=AB69_3982 NZ_JHDO01000118.1 Protein Homology CDS 16947 18491 . + 0 ID=cds-WP_000116566.1;Parent=gene-AB69_RS03905;Dbxref=GenBank:WP_000116566.1;Name=WP_000116566.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AB69_RS03905;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116566.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 18525 19784 . + . ID=gene-AB69_RS03900;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AB69_RS03900;old_locus_tag=AB69_3983 NZ_JHDO01000118.1 Protein Homology CDS 18525 19784 . + 0 ID=cds-WP_000196256.1;Parent=gene-AB69_RS03900;Dbxref=GenBank:WP_000196256.1;Name=WP_000196256.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AB69_RS03900;product=murein hydrolase activator EnvC;protein_id=WP_000196256.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 19788 20747 . + . ID=gene-AB69_RS03895;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AB69_RS03895;old_locus_tag=AB69_3984 NZ_JHDO01000118.1 Protein Homology CDS 19788 20747 . + 0 ID=cds-WP_000483847.1;Parent=gene-AB69_RS03895;Dbxref=GenBank:WP_000483847.1;Name=WP_000483847.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418071.4;locus_tag=AB69_RS03895;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483847.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 20734 21768 . - . ID=gene-AB69_RS03890;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AB69_RS03890;old_locus_tag=AB69_3985 NZ_JHDO01000118.1 Protein Homology CDS 20734 21768 . - 0 ID=cds-WP_000982091.1;Parent=gene-AB69_RS03890;Dbxref=GenBank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AB69_RS03890;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 22007 23032 . - . ID=gene-AB69_RS03885;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AB69_RS03885;old_locus_tag=AB69_3986 NZ_JHDO01000118.1 Protein Homology CDS 22007 23032 . - 0 ID=cds-WP_000646007.1;Parent=gene-AB69_RS03885;Dbxref=GenBank:WP_000646007.1;Name=WP_000646007.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AB69_RS03885;product=L-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 23042 24238 . - . ID=gene-AB69_RS03880;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AB69_RS03880;old_locus_tag=AB69_3987 NZ_JHDO01000118.1 Protein Homology CDS 23042 24238 . - 0 ID=cds-WP_001213834.1;Parent=gene-AB69_RS03880;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AB69_RS03880;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 24513 25370 . - . ID=gene-AB69_RS03875;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=AB69_RS03875;old_locus_tag=AB69_3988 NZ_JHDO01000118.1 Protein Homology CDS 24513 25370 . - 0 ID=cds-WP_000842823.1;Parent=gene-AB69_RS03875;Dbxref=GenBank:WP_000842823.1;Name=WP_000842823.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418075.2;locus_tag=AB69_RS03875;product=protein YibB;protein_id=WP_000842823.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 25674 26606 . + . ID=gene-AB69_RS03870;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AB69_RS03870;old_locus_tag=AB69_3989 NZ_JHDO01000118.1 Protein Homology CDS 25674 26606 . + 0 ID=cds-WP_000587764.1;Parent=gene-AB69_RS03870;Dbxref=GenBank:WP_000587764.1;Name=WP_000587764.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AB69_RS03870;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587764.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 26616 27662 . + . ID=gene-AB69_RS03865;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AB69_RS03865;old_locus_tag=AB69_3990 NZ_JHDO01000118.1 Protein Homology CDS 26616 27662 . + 0 ID=cds-WP_000699219.1;Parent=gene-AB69_RS03865;Dbxref=GenBank:WP_000699219.1;Name=WP_000699219.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AB69_RS03865;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699219.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 27666 28658 . + . ID=gene-AB69_RS03860;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AB69_RS03860;old_locus_tag=AB69_3991 NZ_JHDO01000118.1 Protein Homology CDS 27666 28658 . + 0 ID=cds-WP_001264586.1;Parent=gene-AB69_RS03860;Dbxref=GenBank:WP_001264586.1;Name=WP_001264586.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312526.1;locus_tag=AB69_RS03860;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264586.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 28655 29863 . + . ID=gene-AB69_RS03855;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=AB69_RS03855;old_locus_tag=AB69_3992 NZ_JHDO01000118.1 Protein Homology CDS 28655 29863 . + 0 ID=cds-WP_000204742.1;Parent=gene-AB69_RS03855;Dbxref=GenBank:WP_000204742.1;Name=WP_000204742.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312527.1;locus_tag=AB69_RS03855;product=O-antigen ligase RfaL;protein_id=WP_000204742.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 29899 31041 . - . ID=gene-AB69_RS03850;Name=AB69_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS03850;old_locus_tag=AB69_3993 NZ_JHDO01000118.1 Protein Homology CDS 29899 31041 . - 0 ID=cds-WP_000227811.1;Parent=gene-AB69_RS03850;Dbxref=GenBank:WP_000227811.1;Name=WP_000227811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312528.1;locus_tag=AB69_RS03850;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000227811.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 31050 32063 . - . ID=gene-AB69_RS03845;Name=AB69_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS03845;old_locus_tag=AB69_3994 NZ_JHDO01000118.1 Protein Homology CDS 31050 32063 . - 0 ID=cds-WP_000346017.1;Parent=gene-AB69_RS03845;Dbxref=GenBank:WP_000346017.1;Name=WP_000346017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312529.1;locus_tag=AB69_RS03845;product=UDP-glucose--(galactosyl) LPS alpha1%2C2-glucosyltransferase;protein_id=WP_000346017.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 32088 32795 . - . ID=gene-AB69_RS0125275;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AB69_RS0125275;old_locus_tag=AB69_3995 NZ_JHDO01000118.1 Protein Homology CDS 32088 32795 . - 0 ID=cds-WP_000639946.1;Parent=gene-AB69_RS0125275;Dbxref=GenBank:WP_000639946.1;Name=WP_000639946.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709405.1;locus_tag=AB69_RS0125275;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000639946.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 32821 33828 . - . ID=gene-AB69_RS03840;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AB69_RS03840;old_locus_tag=AB69_3996 NZ_JHDO01000118.1 Protein Homology CDS 32821 33828 . - 0 ID=cds-WP_000080643.1;Parent=gene-AB69_RS03840;Dbxref=GenBank:WP_000080643.1;Name=WP_000080643.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457454.1;locus_tag=AB69_RS03840;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000080643.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 33871 34668 . - . ID=gene-AB69_RS03835;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AB69_RS03835;old_locus_tag=AB69_3997 NZ_JHDO01000118.1 Protein Homology CDS 33871 34668 . - 0 ID=cds-WP_001724065.1;Parent=gene-AB69_RS03835;Dbxref=GenBank:WP_001724065.1;Name=WP_001724065.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AB69_RS03835;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001724065.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 34661 35785 . - . ID=gene-AB69_RS03830;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AB69_RS03830;old_locus_tag=AB69_3998 NZ_JHDO01000118.1 Protein Homology CDS 34661 35785 . - 0 ID=cds-WP_032231554.1;Parent=gene-AB69_RS03830;Dbxref=GenBank:WP_032231554.1;Name=WP_032231554.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AB69_RS03830;product=glycosyltransferase family 4 protein;protein_id=WP_032231554.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 35782 36840 . - . ID=gene-AB69_RS03825;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AB69_RS03825;old_locus_tag=AB69_3999 NZ_JHDO01000118.1 Protein Homology CDS 35782 36840 . - 0 ID=cds-WP_071996094.1;Parent=gene-AB69_RS03825;Dbxref=GenBank:WP_071996094.1;Name=WP_071996094.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AB69_RS03825;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_071996094.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 37253 38530 . + . ID=gene-AB69_RS03820;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AB69_RS03820;old_locus_tag=AB69_4000 NZ_JHDO01000118.1 Protein Homology CDS 37253 38530 . + 0 ID=cds-WP_000891564.1;Parent=gene-AB69_RS03820;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AB69_RS03820;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 38538 39017 . + . ID=gene-AB69_RS03815;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AB69_RS03815;old_locus_tag=AB69_4001 NZ_JHDO01000118.1 Protein Homology CDS 38538 39017 . + 0 ID=cds-WP_032231556.1;Parent=gene-AB69_RS03815;Dbxref=GenBank:WP_032231556.1;Name=WP_032231556.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AB69_RS03815;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_032231556.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 39056 39865 . - . ID=gene-AB69_RS03810;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AB69_RS03810;old_locus_tag=AB69_4002 NZ_JHDO01000118.1 Protein Homology CDS 39056 39865 . - 0 ID=cds-WP_001114533.1;Parent=gene-AB69_RS03810;Dbxref=GenBank:WP_001114533.1;Name=WP_001114533.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AB69_RS03810;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114533.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 39963 40130 . - . ID=gene-AB69_RS03805;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AB69_RS03805;old_locus_tag=AB69_4003 NZ_JHDO01000118.1 Protein Homology CDS 39963 40130 . - 0 ID=cds-WP_001051798.1;Parent=gene-AB69_RS03805;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AB69_RS03805;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 40151 40387 . - . ID=gene-AB69_RS03800;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AB69_RS03800;old_locus_tag=AB69_4004 NZ_JHDO01000118.1 Protein Homology CDS 40151 40387 . - 0 ID=cds-WP_000091955.1;Parent=gene-AB69_RS03800;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AB69_RS03800;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 40604 41272 . - . ID=gene-AB69_RS03795;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AB69_RS03795;old_locus_tag=AB69_4005 NZ_JHDO01000118.1 Protein Homology CDS 40604 41272 . - 0 ID=cds-WP_032231558.1;Parent=gene-AB69_RS03795;Dbxref=GenBank:WP_032231558.1;Name=WP_032231558.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709417.4;locus_tag=AB69_RS03795;product=RadC family protein;protein_id=WP_032231558.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 41444 42664 . + . ID=gene-AB69_RS03790;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AB69_RS03790;old_locus_tag=AB69_4006 NZ_JHDO01000118.1 Protein Homology CDS 41444 42664 . + 0 ID=cds-WP_000050139.1;Parent=gene-AB69_RS03790;Dbxref=GenBank:WP_000050139.1;Name=WP_000050139.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AB69_RS03790;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 42642 43100 . + . ID=gene-AB69_RS03785;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AB69_RS03785;old_locus_tag=AB69_4007 NZ_JHDO01000118.1 Protein Homology CDS 42642 43100 . + 0 ID=cds-WP_000976070.1;Parent=gene-AB69_RS03785;Dbxref=GenBank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AB69_RS03785;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 43207 43803 . + . ID=gene-AB69_RS03780;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AB69_RS03780;old_locus_tag=AB69_4008 NZ_JHDO01000118.1 Protein Homology CDS 43207 43803 . + 0 ID=cds-WP_000818601.1;Parent=gene-AB69_RS03780;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AB69_RS03780;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 43840 44481 . - . ID=gene-AB69_RS03775;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AB69_RS03775;old_locus_tag=AB69_4009 NZ_JHDO01000118.1 Protein Homology CDS 43840 44481 . - 0 ID=cds-WP_000806177.1;Parent=gene-AB69_RS03775;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AB69_RS03775;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 44547 45263 . - . ID=gene-AB69_RS03770;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AB69_RS03770;old_locus_tag=AB69_4010 NZ_JHDO01000118.1 Protein Homology CDS 44547 45263 . - 0 ID=cds-WP_032231559.1;Parent=gene-AB69_RS03770;Dbxref=GenBank:WP_032231559.1;Name=WP_032231559.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AB69_RS03770;product=ribonuclease PH;protein_id=WP_032231559.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 45390 46253 . + . ID=gene-AB69_RS03765;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AB69_RS03765;old_locus_tag=AB69_4011 NZ_JHDO01000118.1 Protein Homology CDS 45390 46253 . + 0 ID=cds-WP_032231560.1;Parent=gene-AB69_RS03765;Dbxref=GenBank:WP_032231560.1;Name=WP_032231560.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AB69_RS03765;product=YicC/YloC family endoribonuclease;protein_id=WP_032231560.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 46474 47298 . + . ID=gene-AB69_RS03760;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AB69_RS03760;old_locus_tag=AB69_4013 NZ_JHDO01000118.1 Protein Homology CDS 46474 47298 . + 0 ID=cds-WP_001300958.1;Parent=gene-AB69_RS03760;Dbxref=GenBank:WP_001300958.1;Name=WP_001300958.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=AB69_RS03760;product=DNA damage-inducible protein D;protein_id=WP_001300958.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 47589 48206 . + . ID=gene-AB69_RS03755;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AB69_RS03755;old_locus_tag=AB69_4014 NZ_JHDO01000118.1 Protein Homology CDS 47589 48206 . + 0 ID=cds-WP_000924289.1;Parent=gene-AB69_RS03755;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AB69_RS03755;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 48203 49885 . - . ID=gene-AB69_RS03750;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AB69_RS03750;old_locus_tag=AB69_4015 NZ_JHDO01000118.1 Protein Homology CDS 48203 49885 . - 0 ID=cds-WP_000870036.1;Parent=gene-AB69_RS03750;Dbxref=GenBank:WP_000870036.1;Name=WP_000870036.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AB69_RS03750;product=NAD-dependent DNA ligase LigB;protein_id=WP_000870036.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 50143 50766 . + . ID=gene-AB69_RS03745;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AB69_RS03745;old_locus_tag=AB69_4016 NZ_JHDO01000118.1 Protein Homology CDS 50143 50766 . + 0 ID=cds-WP_001295237.1;Parent=gene-AB69_RS03745;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AB69_RS03745;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 50821 51096 . + . ID=gene-AB69_RS03740;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AB69_RS03740;old_locus_tag=AB69_4017 NZ_JHDO01000118.1 Protein Homology CDS 50821 51096 . + 0 ID=cds-WP_000135058.1;Parent=gene-AB69_RS03740;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AB69_RS03740;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 51115 53223 . + . ID=gene-AB69_RS03735;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AB69_RS03735;old_locus_tag=AB69_4018 NZ_JHDO01000118.1 Protein Homology CDS 51115 53223 . + 0 ID=cds-WP_000280488.1;Parent=gene-AB69_RS03735;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AB69_RS03735;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 53230 53919 . + . ID=gene-AB69_RS03730;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AB69_RS03730;old_locus_tag=AB69_4019 NZ_JHDO01000118.1 Protein Homology CDS 53230 53919 . + 0 ID=cds-WP_001070177.1;Parent=gene-AB69_RS03730;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AB69_RS03730;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 53925 56006 . + . ID=gene-AB69_RS03725;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AB69_RS03725;old_locus_tag=AB69_4020 NZ_JHDO01000118.1 Protein Homology CDS 53925 56006 . + 0 ID=cds-WP_000678419.1;Parent=gene-AB69_RS03725;Dbxref=GenBank:WP_000678419.1;Name=WP_000678419.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AB69_RS03725;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678419.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 56175 57380 . - . ID=gene-AB69_RS03720;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AB69_RS03720;old_locus_tag=AB69_4021 NZ_JHDO01000118.1 Protein Homology CDS 56175 57380 . - 0 ID=cds-WP_000468833.1;Parent=gene-AB69_RS03720;Dbxref=GenBank:WP_000468833.1;Name=WP_000468833.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AB69_RS03720;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 57660 59051 . + . ID=gene-AB69_RS03715;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AB69_RS03715;old_locus_tag=AB69_4022 NZ_JHDO01000118.1 Protein Homology CDS 57660 59051 . + 0 ID=cds-WP_001295238.1;Parent=gene-AB69_RS03715;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AB69_RS03715;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 59172 60881 . + . ID=gene-AB69_RS03710;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AB69_RS03710;old_locus_tag=AB69_4023 NZ_JHDO01000118.1 Protein Homology CDS 59172 60881 . + 0 ID=cds-WP_001300954.1;Parent=gene-AB69_RS03710;Dbxref=GenBank:WP_001300954.1;Name=WP_001300954.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=AB69_RS03710;product=AsmA family protein;protein_id=WP_001300954.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 60934 63252 . - . ID=gene-AB69_RS03705;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AB69_RS03705;old_locus_tag=AB69_4024 NZ_JHDO01000118.1 Protein Homology CDS 60934 63252 . - 0 ID=cds-WP_000702898.1;Parent=gene-AB69_RS03705;Dbxref=GenBank:WP_000702898.1;Name=WP_000702898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AB69_RS03705;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 63262 64644 . - . ID=gene-AB69_RS03700;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AB69_RS03700;old_locus_tag=AB69_4025 NZ_JHDO01000118.1 Protein Homology CDS 63262 64644 . - 0 ID=cds-WP_000834439.1;Parent=gene-AB69_RS03700;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AB69_RS03700;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 64937 65031 . + . ID=gene-AB69_RS03695;Name=AB69_RS03695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03695;old_locus_tag=AB69_4026 NZ_JHDO01000118.1 tRNAscan-SE tRNA 64937 65031 . + . ID=rna-AB69_RS03695;Parent=gene-AB69_RS03695;anticodon=(pos:64971..64973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03695;product=tRNA-Sec NZ_JHDO01000118.1 tRNAscan-SE exon 64937 65031 . + . ID=exon-AB69_RS03695-1;Parent=rna-AB69_RS03695;anticodon=(pos:64971..64973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03695;product=tRNA-Sec NZ_JHDO01000118.1 RefSeq pseudogene 65110 65271 . + . ID=gene-AB69_RS30465;Name=rhuM;end_range=65271,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AB69_RS30465;old_locus_tag=AB69_4027;partial=true;pseudo=true;start_range=.,65110 NZ_JHDO01000118.1 Protein Homology CDS 65110 65271 . + 0 ID=cds-AB69_RS30465;Parent=gene-AB69_RS30465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=65271,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=AB69_RS30465;partial=true;product=RhuM family protein;pseudo=true;start_range=.,65110;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 65668 66852 . + . ID=gene-AB69_RS03685;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AB69_RS03685;old_locus_tag=AB69_4028 NZ_JHDO01000118.1 Protein Homology CDS 65668 66852 . + 0 ID=cds-WP_001172876.1;Parent=gene-AB69_RS03685;Dbxref=GenBank:WP_001172876.1;Name=WP_001172876.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AB69_RS03685;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 66963 67886 . + . ID=gene-AB69_RS03680;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AB69_RS03680;old_locus_tag=AB69_4029 NZ_JHDO01000118.1 Protein Homology CDS 66963 67886 . + 0 ID=cds-WP_000535961.1;Parent=gene-AB69_RS03680;Dbxref=GenBank:WP_000535961.1;Name=WP_000535961.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AB69_RS03680;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535961.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 67890 68708 . - . ID=gene-AB69_RS03675;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AB69_RS03675;old_locus_tag=AB69_4030 NZ_JHDO01000118.1 Protein Homology CDS 67890 68708 . - 0 ID=cds-WP_000779426.1;Parent=gene-AB69_RS03675;Dbxref=GenBank:WP_000779426.1;Name=WP_000779426.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AB69_RS03675;product=lipoprotein NlpA;protein_id=WP_000779426.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 68930 69223 . + . ID=gene-AB69_RS03665;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AB69_RS03665;old_locus_tag=AB69_4032 NZ_JHDO01000118.1 Protein Homology CDS 68930 69223 . + 0 ID=cds-WP_000805509.1;Parent=gene-AB69_RS03665;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AB69_RS03665;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 69264 70454 . - . ID=gene-AB69_RS03660;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AB69_RS03660;old_locus_tag=AB69_4033 NZ_JHDO01000118.1 Protein Homology CDS 69264 70454 . - 0 ID=cds-WP_001288549.1;Parent=gene-AB69_RS03660;Dbxref=GenBank:WP_001288549.1;Name=WP_001288549.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AB69_RS03660;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 70665 71117 . - . ID=gene-AB69_RS03655;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AB69_RS03655;old_locus_tag=AB69_4034 NZ_JHDO01000118.1 Protein Homology CDS 70665 71117 . - 0 ID=cds-WP_001295241.1;Parent=gene-AB69_RS03655;Dbxref=GenBank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AB69_RS03655;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 71170 72504 . - . ID=gene-AB69_RS03650;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AB69_RS03650;old_locus_tag=AB69_4035 NZ_JHDO01000118.1 Protein Homology CDS 71170 72504 . - 0 ID=cds-WP_001403836.1;Parent=gene-AB69_RS03650;Dbxref=GenBank:WP_001403836.1;Name=WP_001403836.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AB69_RS03650;product=adenine permease AdeQ;protein_id=WP_001403836.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 72679 74445 . + . ID=gene-AB69_RS03645;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AB69_RS03645;old_locus_tag=AB69_4036 NZ_JHDO01000118.1 Protein Homology CDS 72679 74445 . + 0 ID=cds-WP_001065718.1;Parent=gene-AB69_RS03645;Dbxref=GenBank:WP_001065718.1;Name=WP_001065718.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AB69_RS03645;product=adenine deaminase;protein_id=WP_001065718.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 74491 75882 . - . ID=gene-AB69_RS03640;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AB69_RS03640;old_locus_tag=AB69_4037 NZ_JHDO01000118.1 Protein Homology CDS 74491 75882 . - 0 ID=cds-WP_000879194.1;Parent=gene-AB69_RS03640;Dbxref=GenBank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AB69_RS03640;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 76020 77339 . - . ID=gene-AB69_RS03635;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AB69_RS03635;old_locus_tag=AB69_4038 NZ_JHDO01000118.1 Protein Homology CDS 76020 77339 . - 0 ID=cds-WP_000936566.1;Parent=gene-AB69_RS03635;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AB69_RS03635;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 77349 78851 . - . ID=gene-AB69_RS03630;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AB69_RS03630;old_locus_tag=AB69_4039 NZ_JHDO01000118.1 Protein Homology CDS 77349 78851 . - 0 ID=cds-WP_001295243.1;Parent=gene-AB69_RS03630;Dbxref=GenBank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AB69_RS03630;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 78851 79441 . - . ID=gene-AB69_RS03625;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AB69_RS03625;old_locus_tag=AB69_4040 NZ_JHDO01000118.1 Protein Homology CDS 78851 79441 . - 0 ID=cds-WP_000633668.1;Parent=gene-AB69_RS03625;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AB69_RS03625;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 79517 79807 . - . ID=gene-AB69_RS03620;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB69_RS03620;old_locus_tag=AB69_4041 NZ_JHDO01000118.1 Protein Homology CDS 79517 79807 . - 0 ID=cds-WP_001181706.1;Parent=gene-AB69_RS03620;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AB69_RS03620;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 79811 81499 . - . ID=gene-AB69_RS03615;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AB69_RS03615;old_locus_tag=AB69_4042 NZ_JHDO01000118.1 Protein Homology CDS 79811 81499 . - 0 ID=cds-WP_000168475.1;Parent=gene-AB69_RS03615;Dbxref=GenBank:WP_000168475.1;Name=WP_000168475.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AB69_RS03615;product=acetolactate synthase large subunit;protein_id=WP_000168475.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 81605 81703 . - . ID=gene-AB69_RS0125280;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AB69_RS0125280 NZ_JHDO01000118.1 Protein Homology CDS 81605 81703 . - 0 ID=cds-WP_001300753.1;Parent=gene-AB69_RS0125280;Dbxref=GenBank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AB69_RS0125280;product=ilvB operon leader peptide IvbL;protein_id=WP_001300753.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 82268 82357 . + . ID=gene-AB69_RS0125295;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AB69_RS0125295 NZ_JHDO01000118.1 Protein Homology CDS 82268 82357 . + 0 ID=cds-WP_001054909.1;Parent=gene-AB69_RS0125295;Dbxref=GenBank:WP_001054909.1;Name=WP_001054909.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165331.1;locus_tag=AB69_RS0125295;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_001054909.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 82481 82555 . - . ID=gene-AB69_RS30470;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AB69_RS30470 NZ_JHDO01000118.1 Protein Homology CDS 82481 82555 . - 0 ID=cds-WP_212736119.1;Parent=gene-AB69_RS30470;Dbxref=GenBank:WP_212736119.1;Name=WP_212736119.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AB69_RS30470;product=hypothetical protein;protein_id=WP_212736119.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 82637 83821 . + . ID=gene-AB69_RS03610;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AB69_RS03610;old_locus_tag=AB69_4044 NZ_JHDO01000118.1 Protein Homology CDS 82637 83821 . + 0 ID=cds-WP_032231562.1;Parent=gene-AB69_RS03610;Dbxref=GenBank:WP_032231562.1;Name=WP_032231562.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AB69_RS03610;product=multidrug efflux MFS transporter EmrD;protein_id=WP_032231562.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 83829 84326 . - . ID=gene-AB69_RS03605;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AB69_RS03605;old_locus_tag=AB69_4045 NZ_JHDO01000118.1 Protein Homology CDS 83829 84326 . - 0 ID=cds-WP_000148061.1;Parent=gene-AB69_RS03605;Dbxref=GenBank:WP_000148061.1;Name=WP_000148061.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418130.1;locus_tag=AB69_RS03605;product=radical SAM protein;protein_id=WP_000148061.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 84323 84685 . - . ID=gene-AB69_RS03600;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AB69_RS03600;old_locus_tag=AB69_4046 NZ_JHDO01000118.1 Protein Homology CDS 84323 84685 . - 0 ID=cds-WP_001113432.1;Parent=gene-AB69_RS03600;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AB69_RS03600;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 84675 85022 . - . ID=gene-AB69_RS03595;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AB69_RS03595;old_locus_tag=AB69_4047 NZ_JHDO01000118.1 Protein Homology CDS 84675 85022 . - 0 ID=cds-WP_000703959.1;Parent=gene-AB69_RS03595;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AB69_RS03595;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 85130 85579 . + . ID=gene-AB69_RS03590;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AB69_RS03590;old_locus_tag=AB69_4048 NZ_JHDO01000118.1 Protein Homology CDS 85130 85579 . + 0 ID=cds-WP_000511289.1;Parent=gene-AB69_RS03590;Dbxref=GenBank:WP_000511289.1;Name=WP_000511289.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AB69_RS03590;product=protein YidI;protein_id=WP_000511289.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 85626 87119 . - . ID=gene-AB69_RS03585;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AB69_RS03585;old_locus_tag=AB69_4049 NZ_JHDO01000118.1 Protein Homology CDS 85626 87119 . - 0 ID=cds-WP_000828527.1;Parent=gene-AB69_RS03585;Dbxref=GenBank:WP_000828527.1;Name=WP_000828527.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AB69_RS03585;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828527.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 87116 88831 . - . ID=gene-AB69_RS03580;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AB69_RS03580;old_locus_tag=AB69_4050 NZ_JHDO01000118.1 Protein Homology CDS 87116 88831 . - 0 ID=cds-WP_001087145.1;Parent=gene-AB69_RS03580;Dbxref=GenBank:WP_001087145.1;Name=WP_001087145.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AB69_RS03580;product=solute:sodium symporter family transporter;protein_id=WP_001087145.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 88998 89891 . + . ID=gene-AB69_RS03575;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AB69_RS03575;old_locus_tag=AB69_4051 NZ_JHDO01000118.1 Protein Homology CDS 88998 89891 . + 0 ID=cds-WP_001013540.1;Parent=gene-AB69_RS03575;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AB69_RS03575;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JHDO01000118.1 RefSeq pseudogene 89888 90702 . - . ID=gene-AB69_RS03570;Name=AB69_RS03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS03570;old_locus_tag=AB69_4053;pseudo=true NZ_JHDO01000118.1 Protein Homology CDS 89888 90702 . - 0 ID=cds-AB69_RS03570;Parent=gene-AB69_RS03570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AB69_RS03570;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 90702 92318 . - . ID=gene-AB69_RS03565;Name=AB69_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS03565;old_locus_tag=AB69_4054 NZ_JHDO01000118.1 Protein Homology CDS 90702 92318 . - 0 ID=cds-WP_000952141.1;Parent=gene-AB69_RS03565;Dbxref=GenBank:WP_000952141.1;Name=WP_000952141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AB69_RS03565;product=PTS sugar transporter subunit IIB;protein_id=WP_000952141.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 92614 93330 . + . ID=gene-AB69_RS03560;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AB69_RS03560;old_locus_tag=AB69_4055 NZ_JHDO01000118.1 Protein Homology CDS 92614 93330 . + 0 ID=cds-WP_001300779.1;Parent=gene-AB69_RS03560;Dbxref=GenBank:WP_001300779.1;Name=WP_001300779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AB69_RS03560;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 93327 94988 . - . ID=gene-AB69_RS03555;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AB69_RS03555;old_locus_tag=AB69_4056 NZ_JHDO01000118.1 Protein Homology CDS 93327 94988 . - 0 ID=cds-WP_001279752.1;Parent=gene-AB69_RS03555;Dbxref=GenBank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AB69_RS03555;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 95184 95612 . - . ID=gene-AB69_RS03550;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AB69_RS03550;old_locus_tag=AB69_4057 NZ_JHDO01000118.1 Protein Homology CDS 95184 95612 . - 0 ID=cds-WP_001243431.1;Parent=gene-AB69_RS03550;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AB69_RS03550;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 95724 96137 . - . ID=gene-AB69_RS03545;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AB69_RS03545;old_locus_tag=AB69_4058 NZ_JHDO01000118.1 Protein Homology CDS 95724 96137 . - 0 ID=cds-WP_001243437.1;Parent=gene-AB69_RS03545;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AB69_RS03545;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JHDO01000118.1 cmsearch sequence_feature 96131 96203 . - . ID=id-NZ_JHDO01000118.1:96131..96203;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000118.1 RefSeq gene 96443 96775 . + . ID=gene-AB69_RS03540;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AB69_RS03540;old_locus_tag=AB69_4059 NZ_JHDO01000118.1 Protein Homology CDS 96443 96775 . + 0 ID=cds-WP_000620888.1;Parent=gene-AB69_RS03540;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AB69_RS03540;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 96777 97991 . - . ID=gene-AB69_RS03535;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AB69_RS03535;old_locus_tag=AB69_4060 NZ_JHDO01000118.1 Protein Homology CDS 96777 97991 . - 0 ID=cds-WP_001336371.1;Parent=gene-AB69_RS03535;Dbxref=GenBank:WP_001336371.1;Name=WP_001336371.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AB69_RS03535;product=DUF3748 domain-containing protein;protein_id=WP_001336371.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 98092 99156 . + . ID=gene-AB69_RS03530;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AB69_RS03530;old_locus_tag=AB69_4061 NZ_JHDO01000118.1 Protein Homology CDS 98092 99156 . + 0 ID=cds-WP_001340434.1;Parent=gene-AB69_RS03530;Dbxref=GenBank:WP_001340434.1;Name=WP_001340434.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AB69_RS03530;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001340434.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 99153 100490 . - . ID=gene-AB69_RS03525;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AB69_RS03525;old_locus_tag=AB69_4062 NZ_JHDO01000118.1 Protein Homology CDS 99153 100490 . - 0 ID=cds-WP_000253455.1;Parent=gene-AB69_RS03525;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AB69_RS03525;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 100565 101713 . - . ID=gene-AB69_RS03520;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AB69_RS03520;old_locus_tag=AB69_4063 NZ_JHDO01000118.1 Protein Homology CDS 100565 101713 . - 0 ID=cds-WP_000705001.1;Parent=gene-AB69_RS03520;Dbxref=GenBank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AB69_RS03520;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 101710 102327 . - . ID=gene-AB69_RS03515;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AB69_RS03515;old_locus_tag=AB69_4064 NZ_JHDO01000118.1 Protein Homology CDS 101710 102327 . - 0 ID=cds-WP_032231563.1;Parent=gene-AB69_RS03515;Dbxref=GenBank:WP_032231563.1;Name=WP_032231563.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AB69_RS03515;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_032231563.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 102311 103189 . - . ID=gene-AB69_RS03510;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AB69_RS03510;old_locus_tag=AB69_4065 NZ_JHDO01000118.1 Protein Homology CDS 102311 103189 . - 0 ID=cds-WP_032227398.1;Parent=gene-AB69_RS03510;Dbxref=GenBank:WP_032227398.1;Name=WP_032227398.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418148.1;locus_tag=AB69_RS03510;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_032227398.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 103186 103875 . - . ID=gene-AB69_RS03505;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AB69_RS03505;old_locus_tag=AB69_4066 NZ_JHDO01000118.1 Protein Homology CDS 103186 103875 . - 0 ID=cds-WP_000174305.1;Parent=gene-AB69_RS03505;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AB69_RS03505;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 104153 104809 . + . ID=gene-AB69_RS03500;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AB69_RS03500;old_locus_tag=AB69_4067 NZ_JHDO01000118.1 Protein Homology CDS 104153 104809 . + 0 ID=cds-WP_000772934.1;Parent=gene-AB69_RS03500;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AB69_RS03500;product=protein YidX;protein_id=WP_000772934.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 104855 105667 . - . ID=gene-AB69_RS03495;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AB69_RS03495;old_locus_tag=AB69_4068 NZ_JHDO01000118.1 Protein Homology CDS 104855 105667 . - 0 ID=cds-WP_000985549.1;Parent=gene-AB69_RS03495;Dbxref=GenBank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AB69_RS03495;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 105782 106180 . - . ID=gene-AB69_RS03490;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AB69_RS03490;old_locus_tag=AB69_4069 NZ_JHDO01000118.1 Protein Homology CDS 105782 106180 . - 0 ID=cds-WP_000522208.1;Parent=gene-AB69_RS03490;Dbxref=GenBank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AB69_RS03490;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 106420 108834 . - . ID=gene-AB69_RS03485;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AB69_RS03485;old_locus_tag=AB69_4070 NZ_JHDO01000118.1 Protein Homology CDS 106420 108834 . - 0 ID=cds-WP_000072067.1;Parent=gene-AB69_RS03485;Dbxref=GenBank:WP_000072067.1;Name=WP_000072067.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AB69_RS03485;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072067.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 108863 109936 . - . ID=gene-AB69_RS03480;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AB69_RS03480;old_locus_tag=AB69_4071 NZ_JHDO01000118.1 Protein Homology CDS 108863 109936 . - 0 ID=cds-WP_000060112.1;Parent=gene-AB69_RS03480;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AB69_RS03480;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 109936 111036 . - . ID=gene-AB69_RS03475;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AB69_RS03475;old_locus_tag=AB69_4072 NZ_JHDO01000118.1 Protein Homology CDS 109936 111036 . - 0 ID=cds-WP_000673464.1;Parent=gene-AB69_RS03475;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AB69_RS03475;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 111041 112444 . - . ID=gene-AB69_RS03470;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AB69_RS03470;old_locus_tag=AB69_4073 NZ_JHDO01000118.1 Protein Homology CDS 111041 112444 . - 0 ID=cds-WP_000059111.1;Parent=gene-AB69_RS03470;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AB69_RS03470;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 112741 112821 . + . ID=gene-AB69_RS29885;Name=AB69_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29885 NZ_JHDO01000118.1 Protein Homology CDS 112741 112821 . + 0 ID=cds-WP_120795392.1;Parent=gene-AB69_RS29885;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AB69_RS29885;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 113051 113191 . + . ID=gene-AB69_RS03465;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AB69_RS03465;old_locus_tag=AB69_4075 NZ_JHDO01000118.1 Protein Homology CDS 113051 113191 . + 0 ID=cds-WP_000831330.1;Parent=gene-AB69_RS03465;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AB69_RS03465;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 113208 113567 . + . ID=gene-AB69_RS03460;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AB69_RS03460;old_locus_tag=AB69_4076 NZ_JHDO01000118.1 Protein Homology CDS 113208 113567 . + 0 ID=cds-WP_000239730.1;Parent=gene-AB69_RS03460;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AB69_RS03460;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 113531 113788 . + . ID=gene-AB69_RS0125305;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AB69_RS0125305 NZ_JHDO01000118.1 Protein Homology CDS 113531 113788 . + 0 ID=cds-WP_001307474.1;Parent=gene-AB69_RS0125305;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AB69_RS0125305;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 113791 115437 . + . ID=gene-AB69_RS03455;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AB69_RS03455;old_locus_tag=AB69_4077 NZ_JHDO01000118.1 Protein Homology CDS 113791 115437 . + 0 ID=cds-WP_000378250.1;Parent=gene-AB69_RS03455;Dbxref=GenBank:WP_000378250.1;Name=WP_000378250.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AB69_RS03455;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 115543 116907 . + . ID=gene-AB69_RS03450;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AB69_RS03450;old_locus_tag=AB69_4078 NZ_JHDO01000118.1 Protein Homology CDS 115543 116907 . + 0 ID=cds-WP_001282346.1;Parent=gene-AB69_RS03450;Dbxref=GenBank:WP_001282346.1;Name=WP_001282346.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AB69_RS03450;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 117150 117224 . + . ID=gene-AB69_RS0125310;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AB69_RS0125310 NZ_JHDO01000118.1 Protein Homology CDS 117150 117224 . + 0 ID=cds-WP_001364348.1;Parent=gene-AB69_RS0125310;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AB69_RS0125310;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 117445 118860 . + . ID=gene-AB69_RS03445;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AB69_RS03445;old_locus_tag=AB69_4079 NZ_JHDO01000118.1 Protein Homology CDS 117445 118860 . + 0 ID=cds-WP_001295247.1;Parent=gene-AB69_RS03445;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AB69_RS03445;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 118951 120198 . + . ID=gene-AB69_RS03440;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AB69_RS03440;old_locus_tag=AB69_4080 NZ_JHDO01000118.1 Protein Homology CDS 118951 120198 . + 0 ID=cds-WP_000131911.1;Parent=gene-AB69_RS03440;Dbxref=GenBank:WP_000131911.1;Name=WP_000131911.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AB69_RS03440;product=low affinity tryptophan permease TnaB;protein_id=WP_000131911.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 120330 121505 . + . ID=gene-AB69_RS03435;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AB69_RS03435;old_locus_tag=AB69_4081 NZ_JHDO01000118.1 Protein Homology CDS 120330 121505 . + 0 ID=cds-WP_032231564.1;Parent=gene-AB69_RS03435;Dbxref=GenBank:WP_032231564.1;Name=WP_032231564.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AB69_RS03435;product=multidrug efflux MFS transporter MdtL;protein_id=WP_032231564.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 121480 122439 . + . ID=gene-AB69_RS03430;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AB69_RS03430;old_locus_tag=AB69_4082 NZ_JHDO01000118.1 Protein Homology CDS 121480 122439 . + 0 ID=cds-WP_000748502.1;Parent=gene-AB69_RS03430;Dbxref=GenBank:WP_000748502.1;Name=WP_000748502.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AB69_RS03430;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000748502.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 122596 123345 . + . ID=gene-AB69_RS03425;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB69_RS03425;old_locus_tag=AB69_4083 NZ_JHDO01000118.1 Protein Homology CDS 122596 123345 . + 0 ID=cds-WP_001349996.1;Parent=gene-AB69_RS03425;Dbxref=GenBank:WP_001349996.1;Name=WP_001349996.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AB69_RS03425;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001349996.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 123367 123933 . + . ID=gene-AB69_RS03420;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AB69_RS03420;old_locus_tag=AB69_4084 NZ_JHDO01000118.1 Protein Homology CDS 123367 123933 . + 0 ID=cds-WP_001291261.1;Parent=gene-AB69_RS03420;Dbxref=GenBank:WP_001291261.1;Name=WP_001291261.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AB69_RS03420;product=class I chromate reductase YieF;protein_id=WP_001291261.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 123987 125324 . - . ID=gene-AB69_RS03415;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AB69_RS03415;old_locus_tag=AB69_4085 NZ_JHDO01000118.1 Protein Homology CDS 123987 125324 . - 0 ID=cds-WP_001299598.1;Parent=gene-AB69_RS03415;Dbxref=GenBank:WP_001299598.1;Name=WP_001299598.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AB69_RS03415;product=adenine permease AdeP;protein_id=WP_001299598.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 125491 126156 . + . ID=gene-AB69_RS03410;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AB69_RS03410;old_locus_tag=AB69_4086 NZ_JHDO01000118.1 Protein Homology CDS 125491 126156 . + 0 ID=cds-WP_000078043.1;Parent=gene-AB69_RS03410;Dbxref=GenBank:WP_000078043.1;Name=WP_000078043.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AB69_RS03410;product=6-phosphogluconate phosphatase;protein_id=WP_000078043.1;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 126223 126696 . + . ID=gene-AB69_RS0125315;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;locus_tag=AB69_RS0125315;old_locus_tag=AB69_4087 NZ_JHDO01000118.1 Protein Homology CDS 126223 126696 . + 0 ID=cds-WP_000116772.1;Parent=gene-AB69_RS0125315;Dbxref=GenBank:WP_000116772.1;Name=WP_000116772.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AB69_RS0125315;product=protein CbrB;protein_id=WP_000116772.1;transl_table=11 NZ_JHDO01000118.1 RefSeq pseudogene 126745 127015 . + . ID=gene-AB69_RS0125320;Name=AB69_RS0125320;end_range=127015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS0125320;partial=true;pseudo=true NZ_JHDO01000118.1 Protein Homology CDS 126745 127015 . + 0 ID=cds-AB69_RS0125320;Parent=gene-AB69_RS0125320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=127015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=AB69_RS0125320;partial=true;product=CbrC family protein;pseudo=true;transl_table=11 NZ_JHDO01000118.1 RefSeq gene 127027 127724 . - . ID=gene-AB69_RS03405;Name=AB69_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS03405;old_locus_tag=AB69_4088 NZ_JHDO01000118.1 Protein Homology CDS 127475 127724 . - 0 ID=cds-WP_094096600.1-14;Parent=gene-AB69_RS03405;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS03405;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000118.1 Protein Homology CDS 127027 127475 . - 2 ID=cds-WP_094096600.1-14;Parent=gene-AB69_RS03405;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS03405;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JHDO01000119.1 1 36821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000119.1 RefSeq region 1 36821 . + . ID=NZ_JHDO01000119.1:1..36821;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000119.1 RefSeq pseudogene 1 553 . - . ID=gene-AB69_RS28975;Name=AB69_RS28975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28975;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000119.1 Protein Homology CDS 1 553 . - 0 ID=cds-AB69_RS28975;Parent=gene-AB69_RS28975;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28975;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 920 1645 . - . ID=gene-AB69_RS03395;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AB69_RS03395;old_locus_tag=AB69_4091 NZ_JHDO01000119.1 Protein Homology CDS 920 1645 . - 0 ID=cds-WP_000377786.1;Parent=gene-AB69_RS03395;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AB69_RS03395;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 1660 2433 . - . ID=gene-AB69_RS03390;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AB69_RS03390;old_locus_tag=AB69_4092 NZ_JHDO01000119.1 Protein Homology CDS 1660 2433 . - 0 ID=cds-WP_000063125.1;Parent=gene-AB69_RS03390;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AB69_RS03390;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 2616 3506 . - . ID=gene-AB69_RS03385;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AB69_RS03385;old_locus_tag=AB69_4093 NZ_JHDO01000119.1 Protein Homology CDS 2616 3506 . - 0 ID=cds-WP_001251978.1;Parent=gene-AB69_RS03385;Dbxref=GenBank:WP_001251978.1;Name=WP_001251978.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AB69_RS03385;product=phosphate ABC transporter permease PstA;protein_id=WP_001251978.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 3506 4465 . - . ID=gene-AB69_RS03380;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AB69_RS03380;old_locus_tag=AB69_4094 NZ_JHDO01000119.1 Protein Homology CDS 3506 4465 . - 0 ID=cds-WP_000741620.1;Parent=gene-AB69_RS03380;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AB69_RS03380;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 4552 5592 . - . ID=gene-AB69_RS03375;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AB69_RS03375;old_locus_tag=AB69_4095 NZ_JHDO01000119.1 Protein Homology CDS 4552 5592 . - 0 ID=cds-WP_000867146.1;Parent=gene-AB69_RS03375;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AB69_RS03375;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 5906 7735 . - . ID=gene-AB69_RS03370;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AB69_RS03370;old_locus_tag=AB69_4096 NZ_JHDO01000119.1 Protein Homology CDS 5906 7735 . - 0 ID=cds-WP_000334099.1;Parent=gene-AB69_RS03370;Dbxref=GenBank:WP_000334099.1;Name=WP_000334099.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AB69_RS03370;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334099.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 7897 9267 . - . ID=gene-AB69_RS03365;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AB69_RS03365;old_locus_tag=AB69_4097 NZ_JHDO01000119.1 Protein Homology CDS 7897 9267 . - 0 ID=cds-WP_000933736.1;Parent=gene-AB69_RS03365;Dbxref=GenBank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AB69_RS03365;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 9620 10039 . - . ID=gene-AB69_RS03360;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AB69_RS03360;old_locus_tag=AB69_4098 NZ_JHDO01000119.1 Protein Homology CDS 9620 10039 . - 0 ID=cds-WP_001251965.1;Parent=gene-AB69_RS03360;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AB69_RS03360;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 10060 11442 . - . ID=gene-AB69_RS03355;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AB69_RS03355;old_locus_tag=AB69_4099 NZ_JHDO01000119.1 Protein Homology CDS 10060 11442 . - 0 ID=cds-WP_000190506.1;Parent=gene-AB69_RS03355;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AB69_RS03355;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 11469 12332 . - . ID=gene-AB69_RS03350;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AB69_RS03350;old_locus_tag=AB69_4100 NZ_JHDO01000119.1 Protein Homology CDS 11469 12332 . - 0 ID=cds-WP_000896498.1;Parent=gene-AB69_RS03350;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AB69_RS03350;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 12383 13924 . - . ID=gene-AB69_RS03345;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AB69_RS03345;old_locus_tag=AB69_4101 NZ_JHDO01000119.1 Protein Homology CDS 12383 13924 . - 0 ID=cds-WP_001176745.1;Parent=gene-AB69_RS03345;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AB69_RS03345;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 13937 14470 . - . ID=gene-AB69_RS03340;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AB69_RS03340;old_locus_tag=AB69_4102 NZ_JHDO01000119.1 Protein Homology CDS 13937 14470 . - 0 ID=cds-WP_001288587.1;Parent=gene-AB69_RS03340;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AB69_RS03340;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 14485 14955 . - . ID=gene-AB69_RS03335;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AB69_RS03335;old_locus_tag=AB69_4103 NZ_JHDO01000119.1 Protein Homology CDS 14485 14955 . - 0 ID=cds-WP_001052219.1;Parent=gene-AB69_RS03335;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AB69_RS03335;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 15017 15256 . - . ID=gene-AB69_RS03330;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AB69_RS03330;old_locus_tag=AB69_4104 NZ_JHDO01000119.1 Protein Homology CDS 15017 15256 . - 0 ID=cds-WP_000429386.1;Parent=gene-AB69_RS03330;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AB69_RS03330;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 15303 16118 . - . ID=gene-AB69_RS03325;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AB69_RS03325;old_locus_tag=AB69_4105 NZ_JHDO01000119.1 Protein Homology CDS 15303 16118 . - 0 ID=cds-WP_000135625.1;Parent=gene-AB69_RS03325;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AB69_RS03325;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 16127 16507 . - . ID=gene-AB69_RS0125325;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AB69_RS0125325 NZ_JHDO01000119.1 Protein Homology CDS 16127 16507 . - 0 ID=cds-WP_000116695.1;Parent=gene-AB69_RS0125325;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AB69_RS0125325;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 17124 17747 . - . ID=gene-AB69_RS03320;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AB69_RS03320;old_locus_tag=AB69_4107 NZ_JHDO01000119.1 Protein Homology CDS 17124 17747 . - 0 ID=cds-WP_000932839.1;Parent=gene-AB69_RS03320;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AB69_RS03320;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 17811 19700 . - . ID=gene-AB69_RS03315;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AB69_RS03315;old_locus_tag=AB69_4108 NZ_JHDO01000119.1 Protein Homology CDS 17811 19700 . - 0 ID=cds-WP_000499788.1;Parent=gene-AB69_RS03315;Dbxref=GenBank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AB69_RS03315;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 20079 20522 . - . ID=gene-AB69_RS03310;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AB69_RS03310;old_locus_tag=AB69_4109 NZ_JHDO01000119.1 Protein Homology CDS 20079 20522 . - 0 ID=cds-WP_000763724.1;Parent=gene-AB69_RS03310;Dbxref=GenBank:WP_000763724.1;Name=WP_000763724.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418198.1;locus_tag=AB69_RS03310;product=FMN-binding protein MioC;protein_id=WP_000763724.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 20612 21070 . - . ID=gene-AB69_RS03305;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AB69_RS03305;old_locus_tag=AB69_4110 NZ_JHDO01000119.1 Protein Homology CDS 20612 21070 . - 0 ID=cds-WP_000432970.1;Parent=gene-AB69_RS03305;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AB69_RS03305;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 21222 22214 . + . ID=gene-AB69_RS03300;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AB69_RS03300;old_locus_tag=AB69_4111 NZ_JHDO01000119.1 Protein Homology CDS 21222 22214 . + 0 ID=cds-WP_000845104.1;Parent=gene-AB69_RS03300;Dbxref=GenBank:WP_000845104.1;Name=WP_000845104.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418200.1;locus_tag=AB69_RS03300;product=aspartate--ammonia ligase;protein_id=WP_000845104.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 22219 23670 . - . ID=gene-AB69_RS03295;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AB69_RS03295;old_locus_tag=AB69_4112 NZ_JHDO01000119.1 Protein Homology CDS 22219 23670 . - 0 ID=cds-WP_000956642.1;Parent=gene-AB69_RS03295;Dbxref=GenBank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AB69_RS03295;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 23664 25160 . - . ID=gene-AB69_RS03290;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AB69_RS03290;old_locus_tag=AB69_4113 NZ_JHDO01000119.1 Protein Homology CDS 23664 25160 . - 0 ID=cds-WP_001299914.1;Parent=gene-AB69_RS03290;Dbxref=GenBank:WP_001299914.1;Name=WP_001299914.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AB69_RS03290;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 25383 27251 . + . ID=gene-AB69_RS03285;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AB69_RS03285;old_locus_tag=AB69_4114 NZ_JHDO01000119.1 Protein Homology CDS 25383 27251 . + 0 ID=cds-WP_000102319.1;Parent=gene-AB69_RS03285;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AB69_RS03285;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 27418 27837 . + . ID=gene-AB69_RS03280;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AB69_RS03280;old_locus_tag=AB69_4115 NZ_JHDO01000119.1 Protein Homology CDS 27418 27837 . + 0 ID=cds-WP_032231571.1;Parent=gene-AB69_RS03280;Dbxref=GenBank:WP_032231571.1;Name=WP_032231571.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312717.1;locus_tag=AB69_RS03280;product=D-ribose pyranase;protein_id=WP_032231571.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 27845 29350 . + . ID=gene-AB69_RS03275;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AB69_RS03275;old_locus_tag=AB69_4116 NZ_JHDO01000119.1 Protein Homology CDS 27845 29350 . + 0 ID=cds-WP_000387770.1;Parent=gene-AB69_RS03275;Dbxref=GenBank:WP_000387770.1;Name=WP_000387770.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AB69_RS03275;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387770.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 29355 30320 . + . ID=gene-AB69_RS03270;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AB69_RS03270;old_locus_tag=AB69_4117 NZ_JHDO01000119.1 Protein Homology CDS 29355 30320 . + 0 ID=cds-WP_000211858.1;Parent=gene-AB69_RS03270;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AB69_RS03270;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 30345 31235 . + . ID=gene-AB69_RS03265;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AB69_RS03265;old_locus_tag=AB69_4118 NZ_JHDO01000119.1 Protein Homology CDS 30345 31235 . + 0 ID=cds-WP_001056273.1;Parent=gene-AB69_RS03265;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AB69_RS03265;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 31361 32290 . + . ID=gene-AB69_RS03260;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AB69_RS03260;old_locus_tag=AB69_4119 NZ_JHDO01000119.1 Protein Homology CDS 31361 32290 . + 0 ID=cds-WP_001300603.1;Parent=gene-AB69_RS03260;Dbxref=GenBank:WP_001300603.1;Name=WP_001300603.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AB69_RS03260;product=ribokinase;protein_id=WP_001300603.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 32294 33286 . + . ID=gene-AB69_RS03255;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AB69_RS03255;old_locus_tag=AB69_4120 NZ_JHDO01000119.1 Protein Homology CDS 32294 33286 . + 0 ID=cds-WP_000224470.1;Parent=gene-AB69_RS03255;Dbxref=GenBank:WP_000224470.1;Name=WP_000224470.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AB69_RS03255;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224470.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 33252 34679 . - . ID=gene-AB69_RS0125330;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB69_RS0125330 NZ_JHDO01000119.1 Protein Homology CDS 33252 34679 . - 0 ID=cds-WP_001280852.1;Parent=gene-AB69_RS0125330;Dbxref=GenBank:WP_001280852.1;Name=WP_001280852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AB69_RS0125330;product=multidrug transporter subunit MdtD;protein_id=WP_001280852.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 34702 35394 . - . ID=gene-AB69_RS03250;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AB69_RS03250;old_locus_tag=AB69_4123 NZ_JHDO01000119.1 Protein Homology CDS 34702 35394 . - 0 ID=cds-WP_001131164.1;Parent=gene-AB69_RS03250;Dbxref=GenBank:WP_001131164.1;Name=WP_001131164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AB69_RS03250;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131164.1;transl_table=11 NZ_JHDO01000119.1 RefSeq gene 35875 36821 . + . ID=gene-AB69_RS03245;Name=AB69_RS03245;end_range=36821,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS03245;old_locus_tag=AB69_4124;partial=true NZ_JHDO01000119.1 cmsearch rRNA 35875 36821 . + . ID=rna-AB69_RS03245;Parent=gene-AB69_RS03245;Dbxref=RFAM:RF00177;end_range=36821,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS03245;partial=true;product=16S ribosomal RNA NZ_JHDO01000119.1 cmsearch exon 35875 36821 . + . ID=exon-AB69_RS03245-1;Parent=rna-AB69_RS03245;Dbxref=RFAM:RF00177;end_range=36821,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS03245;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000120.1 1 90943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000120.1 RefSeq region 1 90943 . + . ID=NZ_JHDO01000120.1:1..90943;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000120.1 RefSeq gene 1 1168 . + . ID=gene-AB69_RS0125335;Name=AB69_RS0125335;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125335;partial=true;start_range=.,1 NZ_JHDO01000120.1 cmsearch rRNA 1 1168 . + . ID=rna-AB69_RS0125335;Parent=gene-AB69_RS0125335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125335;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000120.1 cmsearch exon 1 1168 . + . ID=exon-AB69_RS0125335-1;Parent=rna-AB69_RS0125335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125335;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000120.1 RefSeq gene 1263 1378 . + . ID=gene-AB69_RS03240;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS03240;old_locus_tag=AB69_4125 NZ_JHDO01000120.1 cmsearch rRNA 1263 1378 . + . ID=rna-AB69_RS03240;Parent=gene-AB69_RS03240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS03240;product=5S ribosomal RNA NZ_JHDO01000120.1 cmsearch exon 1263 1378 . + . ID=exon-AB69_RS03240-1;Parent=rna-AB69_RS03240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS03240;product=5S ribosomal RNA NZ_JHDO01000120.1 RefSeq gene 1433 1509 . + . ID=gene-AB69_RS03235;Name=AB69_RS03235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03235;old_locus_tag=AB69_4126 NZ_JHDO01000120.1 tRNAscan-SE tRNA 1433 1509 . + . ID=rna-AB69_RS03235;Parent=gene-AB69_RS03235;anticodon=(pos:1467..1469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03235;product=tRNA-Asp NZ_JHDO01000120.1 tRNAscan-SE exon 1433 1509 . + . ID=exon-AB69_RS03235-1;Parent=rna-AB69_RS03235;anticodon=(pos:1467..1469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03235;product=tRNA-Asp NZ_JHDO01000120.1 RefSeq gene 1518 1593 . + . ID=gene-AB69_RS03230;Name=AB69_RS03230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03230;old_locus_tag=AB69_4127 NZ_JHDO01000120.1 tRNAscan-SE tRNA 1518 1593 . + . ID=rna-AB69_RS03230;Parent=gene-AB69_RS03230;anticodon=(pos:1551..1553);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03230;product=tRNA-Trp NZ_JHDO01000120.1 tRNAscan-SE exon 1518 1593 . + . ID=exon-AB69_RS03230-1;Parent=rna-AB69_RS03230;anticodon=(pos:1551..1553);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03230;product=tRNA-Trp NZ_JHDO01000120.1 RefSeq gene 1689 2528 . - . ID=gene-AB69_RS03225;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AB69_RS03225;old_locus_tag=AB69_4128 NZ_JHDO01000120.1 Protein Homology CDS 1689 2528 . - 0 ID=cds-WP_001398063.1;Parent=gene-AB69_RS03225;Dbxref=GenBank:WP_001398063.1;Name=WP_001398063.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709570.1;locus_tag=AB69_RS03225;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001398063.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 2647 2985 . + . ID=gene-AB69_RS03220;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AB69_RS03220;old_locus_tag=AB69_4129 NZ_JHDO01000120.1 Protein Homology CDS 2647 2985 . + 0 ID=cds-WP_000841001.1;Parent=gene-AB69_RS03220;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AB69_RS03220;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 3010 4530 . - . ID=gene-AB69_RS03215;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AB69_RS03215;old_locus_tag=AB69_4130 NZ_JHDO01000120.1 Protein Homology CDS 3010 4530 . - 0 ID=cds-WP_000058964.1;Parent=gene-AB69_RS03215;Dbxref=GenBank:WP_000058964.1;Name=WP_000058964.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AB69_RS03215;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058964.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 4883 4981 . + . ID=gene-AB69_RS0125340;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AB69_RS0125340 NZ_JHDO01000120.1 Protein Homology CDS 4883 4981 . + 0 ID=cds-WP_001311244.1;Parent=gene-AB69_RS0125340;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AB69_RS0125340;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 5068 5118 . + . ID=gene-AB69_RS29550;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AB69_RS29550 NZ_JHDO01000120.1 Protein Homology CDS 5068 5118 . + 0 ID=cds-WP_001387183.1;Parent=gene-AB69_RS29550;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AB69_RS29550;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 5121 6767 . + . ID=gene-AB69_RS03210;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AB69_RS03210;old_locus_tag=AB69_4131 NZ_JHDO01000120.1 Protein Homology CDS 5121 6767 . + 0 ID=cds-WP_001012607.1;Parent=gene-AB69_RS03210;Dbxref=GenBank:WP_001012607.1;Name=WP_001012607.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AB69_RS03210;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012607.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 6764 7027 . + . ID=gene-AB69_RS03205;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AB69_RS03205;old_locus_tag=AB69_4132 NZ_JHDO01000120.1 Protein Homology CDS 6764 7027 . + 0 ID=cds-WP_000983255.1;Parent=gene-AB69_RS03205;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AB69_RS03205;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 7048 7977 . + . ID=gene-AB69_RS03200;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AB69_RS03200;old_locus_tag=AB69_4133 NZ_JHDO01000120.1 Protein Homology CDS 7048 7977 . + 0 ID=cds-WP_000208520.1;Parent=gene-AB69_RS03200;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AB69_RS03200;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 8042 9892 . + . ID=gene-AB69_RS03195;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AB69_RS03195;old_locus_tag=AB69_4134 NZ_JHDO01000120.1 Protein Homology CDS 8042 9892 . + 0 ID=cds-WP_001127399.1;Parent=gene-AB69_RS03195;Dbxref=GenBank:WP_001127399.1;Name=WP_001127399.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AB69_RS03195;product=dihydroxy-acid dehydratase;protein_id=WP_001127399.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 9895 11439 . + . ID=gene-AB69_RS03190;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AB69_RS03190;old_locus_tag=AB69_4135 NZ_JHDO01000120.1 Protein Homology CDS 9895 11439 . + 0 ID=cds-WP_000785596.1;Parent=gene-AB69_RS03190;Dbxref=GenBank:WP_000785596.1;Name=WP_000785596.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418220.1;locus_tag=AB69_RS03190;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785596.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 11491 12384 . - . ID=gene-AB69_RS03185;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AB69_RS03185;old_locus_tag=AB69_4136 NZ_JHDO01000120.1 Protein Homology CDS 11491 12384 . - 0 ID=cds-WP_000365791.1;Parent=gene-AB69_RS03185;Dbxref=GenBank:WP_000365791.1;Name=WP_000365791.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AB69_RS03185;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365791.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 12534 14009 . + . ID=gene-AB69_RS03180;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AB69_RS03180;old_locus_tag=AB69_4137 NZ_JHDO01000120.1 Protein Homology CDS 12534 14009 . + 0 ID=cds-WP_000024939.1;Parent=gene-AB69_RS03180;Dbxref=GenBank:WP_000024939.1;Name=WP_000024939.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AB69_RS03180;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 14096 14377 . - . ID=gene-AB69_RS03175;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AB69_RS03175;old_locus_tag=AB69_4138 NZ_JHDO01000120.1 Protein Homology CDS 14096 14377 . - 0 ID=cds-WP_001140251.1;Parent=gene-AB69_RS03175;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AB69_RS03175;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JHDO01000120.1 RefSeq pseudogene 14576 15024 . - . ID=gene-AB69_RS29555;Name=AB69_RS29555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29555;pseudo=true NZ_JHDO01000120.1 Protein Homology CDS 14576 15024 . - 0 ID=cds-AB69_RS29555;Parent=gene-AB69_RS29555;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AB69_RS29555;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 15241 17262 . + . ID=gene-AB69_RS03170;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AB69_RS03170;old_locus_tag=AB69_4140 NZ_JHDO01000120.1 Protein Homology CDS 15241 17262 . + 0 ID=cds-WP_001238886.1;Parent=gene-AB69_RS03170;Dbxref=GenBank:WP_001238886.1;Name=WP_001238886.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AB69_RS03170;product=DNA helicase Rep;protein_id=WP_001238886.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 17309 18793 . - . ID=gene-AB69_RS03165;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AB69_RS03165;old_locus_tag=AB69_4141 NZ_JHDO01000120.1 Protein Homology CDS 17309 18793 . - 0 ID=cds-WP_001295254.1;Parent=gene-AB69_RS03165;Dbxref=GenBank:WP_001295254.1;Name=WP_001295254.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AB69_RS03165;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001295254.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 18929 20194 . - . ID=gene-AB69_RS03160;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AB69_RS03160;old_locus_tag=AB69_4142 NZ_JHDO01000120.1 Protein Homology CDS 18929 20194 . - 0 ID=cds-WP_000047499.1;Parent=gene-AB69_RS03160;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AB69_RS03160;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 20325 20654 . + . ID=gene-AB69_RS03155;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AB69_RS03155;old_locus_tag=AB69_4143 NZ_JHDO01000120.1 Protein Homology CDS 20325 20654 . + 0 ID=cds-WP_001280776.1;Parent=gene-AB69_RS03155;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AB69_RS03155;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 20795 20896 . + . ID=gene-AB69_RS0125350;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AB69_RS0125350 NZ_JHDO01000120.1 Protein Homology CDS 20795 20896 . + 0 ID=cds-WP_001295255.1;Parent=gene-AB69_RS0125350;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AB69_RS0125350;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 20981 22240 . + . ID=gene-AB69_RS03150;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AB69_RS03150;old_locus_tag=AB69_4144 NZ_JHDO01000120.1 Protein Homology CDS 20981 22240 . + 0 ID=cds-WP_001417083.1;Parent=gene-AB69_RS03150;Dbxref=GenBank:WP_001417083.1;Name=WP_001417083.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AB69_RS03150;product=transcription termination factor Rho;protein_id=WP_001417083.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 22480 23583 . + . ID=gene-AB69_RS03140;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AB69_RS03140;old_locus_tag=AB69_4146 NZ_JHDO01000120.1 Protein Homology CDS 22480 23583 . + 0 ID=cds-WP_001050960.1;Parent=gene-AB69_RS03140;Dbxref=GenBank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AB69_RS03140;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 23595 24641 . + . ID=gene-AB69_RS03135;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AB69_RS03135;old_locus_tag=AB69_4147 NZ_JHDO01000120.1 Protein Homology CDS 23595 24641 . + 0 ID=cds-WP_001295256.1;Parent=gene-AB69_RS03135;Dbxref=GenBank:WP_001295256.1;Name=WP_001295256.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AB69_RS03135;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001295256.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 24697 25827 . + . ID=gene-AB69_RS03130;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AB69_RS03130;old_locus_tag=AB69_4148 NZ_JHDO01000120.1 Protein Homology CDS 24697 25827 . + 0 ID=cds-WP_001340422.1;Parent=gene-AB69_RS03130;Dbxref=GenBank:WP_001340422.1;Name=WP_001340422.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AB69_RS03130;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_001340422.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 25824 27086 . + . ID=gene-AB69_RS03125;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AB69_RS03125;old_locus_tag=AB69_4149 NZ_JHDO01000120.1 Protein Homology CDS 25824 27086 . + 0 ID=cds-WP_000006621.1;Parent=gene-AB69_RS03125;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AB69_RS03125;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 27086 28153 . + . ID=gene-AB69_RS03120;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AB69_RS03120;old_locus_tag=AB69_4150 NZ_JHDO01000120.1 Protein Homology CDS 27086 28153 . + 0 ID=cds-WP_001226601.1;Parent=gene-AB69_RS03120;Dbxref=GenBank:WP_001226601.1;Name=WP_001226601.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AB69_RS03120;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226601.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 28172 29053 . + . ID=gene-AB69_RS03115;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AB69_RS03115;old_locus_tag=AB69_4151 NZ_JHDO01000120.1 Protein Homology CDS 28172 29053 . + 0 ID=cds-WP_000676056.1;Parent=gene-AB69_RS03115;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AB69_RS03115;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 29031 29705 . + . ID=gene-AB69_RS03110;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AB69_RS03110;old_locus_tag=AB69_4152 NZ_JHDO01000120.1 Protein Homology CDS 29031 29705 . + 0 ID=cds-WP_001145183.1;Parent=gene-AB69_RS03110;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AB69_RS03110;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 29710 30840 . + . ID=gene-AB69_RS03105;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AB69_RS03105;old_locus_tag=AB69_4153 NZ_JHDO01000120.1 Protein Homology CDS 29710 30840 . + 0 ID=cds-WP_000612043.1;Parent=gene-AB69_RS03105;Dbxref=GenBank:WP_000612043.1;Name=WP_000612043.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AB69_RS03105;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612043.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 30842 32092 . + . ID=gene-AB69_RS03100;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AB69_RS03100;old_locus_tag=AB69_4154 NZ_JHDO01000120.1 Protein Homology CDS 30842 32092 . + 0 ID=cds-WP_000050265.1;Parent=gene-AB69_RS03100;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AB69_RS03100;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 32089 33168 . + . ID=gene-AB69_RS03095;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AB69_RS03095;old_locus_tag=AB69_4155 NZ_JHDO01000120.1 Protein Homology CDS 32089 33168 . + 0 ID=cds-WP_000217233.1;Parent=gene-AB69_RS03095;Dbxref=GenBank:WP_000217233.1;Name=WP_000217233.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026257.1;locus_tag=AB69_RS03095;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217233.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 33165 34517 . + . ID=gene-AB69_RS03090;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AB69_RS03090;old_locus_tag=AB69_4156 NZ_JHDO01000120.1 Protein Homology CDS 33165 34517 . + 0 ID=cds-WP_000055129.1;Parent=gene-AB69_RS03090;Dbxref=GenBank:WP_000055129.1;Name=WP_000055129.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418241.1;locus_tag=AB69_RS03090;product=ECA oligosaccharide polymerase;protein_id=WP_000055129.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 34520 35260 . + . ID=gene-AB69_RS03085;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AB69_RS03085;old_locus_tag=AB69_4157 NZ_JHDO01000120.1 Protein Homology CDS 34520 35260 . + 0 ID=cds-WP_001064040.1;Parent=gene-AB69_RS03085;Dbxref=GenBank:WP_001064040.1;Name=WP_001064040.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AB69_RS03085;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064040.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 35451 36836 . + . ID=gene-AB69_RS03080;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AB69_RS03080;old_locus_tag=AB69_4158 NZ_JHDO01000120.1 Protein Homology CDS 35451 36836 . + 0 ID=cds-WP_000774731.1;Parent=gene-AB69_RS03080;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AB69_RS03080;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 36939 37015 . + . ID=gene-AB69_RS03075;Name=AB69_RS03075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03075;old_locus_tag=AB69_4159 NZ_JHDO01000120.1 tRNAscan-SE tRNA 36939 37015 . + . ID=rna-AB69_RS03075;Parent=gene-AB69_RS03075;anticodon=(pos:36973..36975);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03075;product=tRNA-Arg NZ_JHDO01000120.1 tRNAscan-SE exon 36939 37015 . + . ID=exon-AB69_RS03075-1;Parent=rna-AB69_RS03075;anticodon=(pos:36973..36975);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03075;product=tRNA-Arg NZ_JHDO01000120.1 RefSeq gene 37074 37149 . + . ID=gene-AB69_RS03070;Name=AB69_RS03070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03070;old_locus_tag=AB69_4160 NZ_JHDO01000120.1 tRNAscan-SE tRNA 37074 37149 . + . ID=rna-AB69_RS03070;Parent=gene-AB69_RS03070;anticodon=(pos:37107..37109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03070;product=tRNA-His NZ_JHDO01000120.1 tRNAscan-SE exon 37074 37149 . + . ID=exon-AB69_RS03070-1;Parent=rna-AB69_RS03070;anticodon=(pos:37107..37109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03070;product=tRNA-His NZ_JHDO01000120.1 RefSeq gene 37170 37256 . + . ID=gene-AB69_RS03065;Name=AB69_RS03065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03065;old_locus_tag=AB69_4161 NZ_JHDO01000120.1 tRNAscan-SE tRNA 37170 37256 . + . ID=rna-AB69_RS03065;Parent=gene-AB69_RS03065;anticodon=(pos:37204..37206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03065;product=tRNA-Leu NZ_JHDO01000120.1 tRNAscan-SE exon 37170 37256 . + . ID=exon-AB69_RS03065-1;Parent=rna-AB69_RS03065;anticodon=(pos:37204..37206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03065;product=tRNA-Leu NZ_JHDO01000120.1 RefSeq gene 37299 37375 . + . ID=gene-AB69_RS03060;Name=AB69_RS03060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS03060;old_locus_tag=AB69_4162 NZ_JHDO01000120.1 tRNAscan-SE tRNA 37299 37375 . + . ID=rna-AB69_RS03060;Parent=gene-AB69_RS03060;anticodon=(pos:37333..37335);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03060;product=tRNA-Pro NZ_JHDO01000120.1 tRNAscan-SE exon 37299 37375 . + . ID=exon-AB69_RS03060-1;Parent=rna-AB69_RS03060;anticodon=(pos:37333..37335);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS03060;product=tRNA-Pro NZ_JHDO01000120.1 RefSeq gene 37522 38757 . + . ID=gene-AB69_RS03055;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AB69_RS03055;old_locus_tag=AB69_4163 NZ_JHDO01000120.1 Protein Homology CDS 37522 38757 . + 0 ID=cds-WP_032231573.1;Parent=gene-AB69_RS03055;Dbxref=GenBank:WP_032231573.1;Name=WP_032231573.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AB69_RS03055;product=anaerobic sulfatase maturase;protein_id=WP_032231573.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 38916 40571 . - . ID=gene-AB69_RS03050;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=AB69_RS03050;old_locus_tag=AB69_4164 NZ_JHDO01000120.1 Protein Homology CDS 38916 40571 . - 0 ID=cds-WP_000395863.1;Parent=gene-AB69_RS03050;Dbxref=GenBank:WP_000395863.1;Name=WP_000395863.1;gbkey=CDS;gene=aslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AB69_RS03050;product=arylsulfatase AslA;protein_id=WP_000395863.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 41250 42446 . - . ID=gene-AB69_RS03045;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AB69_RS03045;old_locus_tag=AB69_4166 NZ_JHDO01000120.1 Protein Homology CDS 41250 42446 . - 0 ID=cds-WP_000921791.1;Parent=gene-AB69_RS03045;Dbxref=GenBank:WP_000921791.1;Name=WP_000921791.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AB69_RS03045;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 42449 43630 . - . ID=gene-AB69_RS03040;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AB69_RS03040;old_locus_tag=AB69_4167 NZ_JHDO01000120.1 Protein Homology CDS 42449 43630 . - 0 ID=cds-WP_000138997.1;Parent=gene-AB69_RS03040;Dbxref=GenBank:WP_000138997.1;Name=WP_000138997.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418247.1;locus_tag=AB69_RS03040;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138997.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 43652 44392 . - . ID=gene-AB69_RS03035;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AB69_RS03035;old_locus_tag=AB69_4168 NZ_JHDO01000120.1 Protein Homology CDS 43652 44392 . - 0 ID=cds-WP_000026046.1;Parent=gene-AB69_RS03035;Dbxref=GenBank:WP_000026046.1;Name=WP_000026046.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418248.1;locus_tag=AB69_RS03035;product=uroporphyrinogen-III synthase;protein_id=WP_000026046.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 44389 45330 . - . ID=gene-AB69_RS03030;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AB69_RS03030;old_locus_tag=AB69_4169 NZ_JHDO01000120.1 Protein Homology CDS 44389 45330 . - 0 ID=cds-WP_001338644.1;Parent=gene-AB69_RS03030;Dbxref=GenBank:WP_001338644.1;Name=WP_001338644.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AB69_RS03030;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 45717 48263 . + . ID=gene-AB69_RS03025;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AB69_RS03025;old_locus_tag=AB69_4170 NZ_JHDO01000120.1 Protein Homology CDS 45717 48263 . + 0 ID=cds-WP_032231574.1;Parent=gene-AB69_RS03025;Dbxref=GenBank:WP_032231574.1;Name=WP_032231574.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AB69_RS03025;product=class I adenylate cyclase;protein_id=WP_032231574.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 48303 48623 . - . ID=gene-AB69_RS03020;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AB69_RS03020;old_locus_tag=AB69_4171 NZ_JHDO01000120.1 Protein Homology CDS 48303 48623 . - 0 ID=cds-WP_000999947.1;Parent=gene-AB69_RS03020;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AB69_RS03020;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JHDO01000120.1 RefSeq pseudogene 48749 48927 . - . ID=gene-AB69_RS30475;Name=AB69_RS30475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30475;partial=true;pseudo=true;start_range=.,48749 NZ_JHDO01000120.1 Protein Homology CDS 48749 48927 . - 0 ID=cds-AB69_RS30475;Parent=gene-AB69_RS30475;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AB69_RS30475;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,48749;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 49086 49289 . + . ID=gene-AB69_RS03015;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AB69_RS03015;old_locus_tag=AB69_4173 NZ_JHDO01000120.1 Protein Homology CDS 49086 49289 . + 0 ID=cds-WP_000799889.1;Parent=gene-AB69_RS03015;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AB69_RS03015;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 49326 50150 . + . ID=gene-AB69_RS03010;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AB69_RS03010;old_locus_tag=AB69_4174 NZ_JHDO01000120.1 Protein Homology CDS 49326 50150 . + 0 ID=cds-WP_001160654.1;Parent=gene-AB69_RS03010;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AB69_RS03010;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 50147 50854 . + . ID=gene-AB69_RS03005;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AB69_RS03005;old_locus_tag=AB69_4175 NZ_JHDO01000120.1 Protein Homology CDS 50147 50854 . + 0 ID=cds-WP_000812796.1;Parent=gene-AB69_RS03005;Dbxref=GenBank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AB69_RS03005;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 50851 51747 . + . ID=gene-AB69_RS03000;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AB69_RS03000;old_locus_tag=AB69_4176 NZ_JHDO01000120.1 Protein Homology CDS 50851 51747 . + 0 ID=cds-WP_000130691.1;Parent=gene-AB69_RS03000;Dbxref=GenBank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AB69_RS03000;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 51747 52463 . + . ID=gene-AB69_RS02995;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AB69_RS02995;old_locus_tag=AB69_4177 NZ_JHDO01000120.1 Protein Homology CDS 51747 52463 . + 0 ID=cds-WP_001213584.1;Parent=gene-AB69_RS02995;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AB69_RS02995;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 52547 54709 . + . ID=gene-AB69_RS02990;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AB69_RS02990;old_locus_tag=AB69_4178 NZ_JHDO01000120.1 Protein Homology CDS 52547 54709 . + 0 ID=cds-WP_000383406.1;Parent=gene-AB69_RS02990;Dbxref=GenBank:WP_000383406.1;Name=WP_000383406.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AB69_RS02990;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 54856 55620 . - . ID=gene-AB69_RS02985;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AB69_RS02985;old_locus_tag=AB69_4179 NZ_JHDO01000120.1 Protein Homology CDS 54856 55620 . - 0 ID=cds-WP_000951133.1;Parent=gene-AB69_RS02985;Dbxref=GenBank:WP_000951133.1;Name=WP_000951133.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AB69_RS02985;product=phosphodiester glycosidase family protein;protein_id=WP_000951133.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 55782 55838 . + . ID=gene-AB69_RS30480;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AB69_RS30480 NZ_JHDO01000120.1 Protein Homology CDS 55782 55838 . + 0 ID=cds-WP_211180520.1-2;Parent=gene-AB69_RS30480;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AB69_RS30480;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 55990 56940 . + . ID=gene-AB69_RS02975;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AB69_RS02975;old_locus_tag=AB69_4181 NZ_JHDO01000120.1 Protein Homology CDS 55990 56940 . + 0 ID=cds-WP_001388710.1;Parent=gene-AB69_RS02975;Dbxref=GenBank:WP_001388710.1;Name=WP_001388710.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AB69_RS02975;product=magnesium/cobalt transporter CorA;protein_id=WP_001388710.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 56983 57363 . - . ID=gene-AB69_RS02970;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AB69_RS02970;old_locus_tag=AB69_4182 NZ_JHDO01000120.1 Protein Homology CDS 56983 57363 . - 0 ID=cds-WP_000032581.1;Parent=gene-AB69_RS02970;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AB69_RS02970;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 57377 57757 . - . ID=gene-AB69_RS02965;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AB69_RS02965;old_locus_tag=AB69_4183 NZ_JHDO01000120.1 Protein Homology CDS 57377 57757 . - 0 ID=cds-WP_000944218.1;Parent=gene-AB69_RS02965;Dbxref=GenBank:WP_000944218.1;Name=WP_000944218.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AB69_RS02965;product=protein YigG;protein_id=WP_000944218.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 57852 58742 . - . ID=gene-AB69_RS02960;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AB69_RS02960;old_locus_tag=AB69_4184 NZ_JHDO01000120.1 Protein Homology CDS 57852 58742 . - 0 ID=cds-WP_000339104.1;Parent=gene-AB69_RS02960;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AB69_RS02960;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 58794 59261 . - . ID=gene-AB69_RS02955;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AB69_RS02955;old_locus_tag=AB69_4185 NZ_JHDO01000120.1 Protein Homology CDS 58794 59261 . - 0 ID=cds-WP_001277142.1;Parent=gene-AB69_RS02955;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AB69_RS02955;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 59426 60295 . + . ID=gene-AB69_RS02950;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AB69_RS02950;old_locus_tag=AB69_4186 NZ_JHDO01000120.1 Protein Homology CDS 59426 60295 . + 0 ID=cds-WP_001259700.1;Parent=gene-AB69_RS02950;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AB69_RS02950;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 60428 62257 . + . ID=gene-AB69_RS02945;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AB69_RS02945;old_locus_tag=AB69_4187 NZ_JHDO01000120.1 Protein Homology CDS 60428 62257 . + 0 ID=cds-WP_000035581.1;Parent=gene-AB69_RS02945;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AB69_RS02945;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 62321 62941 . + . ID=gene-AB69_RS02940;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AB69_RS02940;old_locus_tag=AB69_4188 NZ_JHDO01000120.1 Protein Homology CDS 62321 62941 . + 0 ID=cds-WP_000928824.1;Parent=gene-AB69_RS02940;Dbxref=GenBank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AB69_RS02940;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 63003 63623 . - . ID=gene-AB69_RS02935;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AB69_RS02935;old_locus_tag=AB69_4189 NZ_JHDO01000120.1 Protein Homology CDS 63003 63623 . - 0 ID=cds-WP_000171710.1;Parent=gene-AB69_RS02935;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AB69_RS02935;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 63734 64756 . + . ID=gene-AB69_RS02930;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AB69_RS02930;old_locus_tag=AB69_4190 NZ_JHDO01000120.1 Protein Homology CDS 63734 64756 . + 0 ID=cds-WP_000487654.1;Parent=gene-AB69_RS02930;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AB69_RS02930;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 64764 65564 . + . ID=gene-AB69_RS02925;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AB69_RS02925;old_locus_tag=AB69_4191 NZ_JHDO01000120.1 Protein Homology CDS 64764 65564 . + 0 ID=cds-WP_000285362.1;Parent=gene-AB69_RS02925;Dbxref=GenBank:WP_000285362.1;Name=WP_000285362.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026267.1;locus_tag=AB69_RS02925;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285362.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 65640 66539 . + . ID=gene-AB69_RS02920;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AB69_RS02920;old_locus_tag=AB69_4192 NZ_JHDO01000120.1 Protein Homology CDS 65640 66539 . + 0 ID=cds-WP_001196238.1;Parent=gene-AB69_RS02920;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AB69_RS02920;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 66427 67380 . - . ID=gene-AB69_RS0125355;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AB69_RS0125355 NZ_JHDO01000120.1 Protein Homology CDS 66427 67380 . - 0 ID=cds-WP_000573621.1;Parent=gene-AB69_RS0125355;Dbxref=GenBank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AB69_RS0125355;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 67617 69878 . + . ID=gene-AB69_RS02915;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AB69_RS02915;old_locus_tag=AB69_4193 NZ_JHDO01000120.1 Protein Homology CDS 67617 69878 . + 0 ID=cds-WP_000153907.1;Parent=gene-AB69_RS02915;Dbxref=GenBank:WP_000153907.1;Name=WP_000153907.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AB69_RS02915;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153907.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 69918 70733 . - . ID=gene-AB69_RS02910;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AB69_RS02910;old_locus_tag=AB69_4194 NZ_JHDO01000120.1 Protein Homology CDS 69918 70733 . - 0 ID=cds-WP_001336442.1;Parent=gene-AB69_RS02910;Dbxref=GenBank:WP_001336442.1;Name=WP_001336442.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026268.1;locus_tag=AB69_RS02910;product=dienelactone hydrolase family protein;protein_id=WP_001336442.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 70995 71756 . + . ID=gene-AB69_RS02905;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AB69_RS02905;old_locus_tag=AB69_4195 NZ_JHDO01000120.1 Protein Homology CDS 70995 71756 . + 0 ID=cds-WP_000045177.1;Parent=gene-AB69_RS02905;Dbxref=GenBank:WP_000045177.1;Name=WP_000045177.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418275.1;locus_tag=AB69_RS02905;product=uridine phosphorylase;protein_id=WP_000045177.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 71897 73324 . + . ID=gene-AB69_RS02900;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AB69_RS02900;old_locus_tag=AB69_4196 NZ_JHDO01000120.1 Protein Homology CDS 71897 73324 . + 0 ID=cds-WP_000347714.1;Parent=gene-AB69_RS02900;Dbxref=GenBank:WP_000347714.1;Name=WP_000347714.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AB69_RS02900;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 73419 74174 . + . ID=gene-AB69_RS02895;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AB69_RS02895;old_locus_tag=AB69_4197 NZ_JHDO01000120.1 Protein Homology CDS 73419 74174 . + 0 ID=cds-WP_000227958.1;Parent=gene-AB69_RS02895;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AB69_RS02895;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 74188 74793 . + . ID=gene-AB69_RS02890;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AB69_RS02890;old_locus_tag=AB69_4198 NZ_JHDO01000120.1 Protein Homology CDS 74188 74793 . + 0 ID=cds-WP_001295259.1;Parent=gene-AB69_RS02890;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AB69_RS02890;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 74790 76430 . + . ID=gene-AB69_RS02885;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AB69_RS02885;old_locus_tag=AB69_4199 NZ_JHDO01000120.1 Protein Homology CDS 74790 76430 . + 0 ID=cds-WP_000187530.1;Parent=gene-AB69_RS02885;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AB69_RS02885;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 76509 76778 . + . ID=gene-AB69_RS02880;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AB69_RS02880;old_locus_tag=AB69_4200 NZ_JHDO01000120.1 Protein Homology CDS 76509 76778 . + 0 ID=cds-WP_001295260.1;Parent=gene-AB69_RS02880;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AB69_RS02880;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 76782 77297 . + . ID=gene-AB69_RS02875;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AB69_RS02875;old_locus_tag=AB69_4201 NZ_JHDO01000120.1 Protein Homology CDS 76782 77297 . + 0 ID=cds-WP_000459594.1;Parent=gene-AB69_RS02875;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AB69_RS02875;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 77300 78076 . + . ID=gene-AB69_RS02870;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AB69_RS02870;old_locus_tag=AB69_4202 NZ_JHDO01000120.1 Protein Homology CDS 77300 78076 . + 0 ID=cds-WP_000109943.1;Parent=gene-AB69_RS02870;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AB69_RS02870;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 78118 78900 . + . ID=gene-AB69_RS02865;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AB69_RS02865;old_locus_tag=AB69_4203 NZ_JHDO01000120.1 Protein Homology CDS 78118 78900 . + 0 ID=cds-WP_000459630.1;Parent=gene-AB69_RS02865;Dbxref=GenBank:WP_000459630.1;Name=WP_000459630.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026271.1;locus_tag=AB69_RS02865;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459630.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 78897 79385 . - . ID=gene-AB69_RS02860;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AB69_RS02860;old_locus_tag=AB69_4204 NZ_JHDO01000120.1 Protein Homology CDS 78897 79385 . - 0 ID=cds-WP_001192396.1;Parent=gene-AB69_RS02860;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AB69_RS02860;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 79552 81045 . + . ID=gene-AB69_RS02855;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AB69_RS02855;old_locus_tag=AB69_4205 NZ_JHDO01000120.1 Protein Homology CDS 79552 81045 . + 0 ID=cds-WP_000339804.1;Parent=gene-AB69_RS02855;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AB69_RS02855;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 81091 81792 . + . ID=gene-AB69_RS02850;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AB69_RS02850;old_locus_tag=AB69_4206 NZ_JHDO01000120.1 Protein Homology CDS 81091 81792 . + 0 ID=cds-WP_000209826.1;Parent=gene-AB69_RS02850;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AB69_RS02850;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 82075 83238 . - . ID=gene-AB69_RS02845;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AB69_RS02845;old_locus_tag=AB69_4207 NZ_JHDO01000120.1 Protein Homology CDS 82075 83238 . - 0 ID=cds-WP_000438725.1;Parent=gene-AB69_RS02845;Dbxref=GenBank:WP_000438725.1;Name=WP_000438725.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AB69_RS02845;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 83248 85437 . - . ID=gene-AB69_RS02840;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AB69_RS02840;old_locus_tag=AB69_4208 NZ_JHDO01000120.1 Protein Homology CDS 83248 85437 . - 0 ID=cds-WP_000965936.1;Parent=gene-AB69_RS02840;Dbxref=GenBank:WP_000965936.1;Name=WP_000965936.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AB69_RS02840;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965936.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 85627 86958 . + . ID=gene-AB69_RS02835;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AB69_RS02835;old_locus_tag=AB69_4209 NZ_JHDO01000120.1 Protein Homology CDS 85627 86958 . + 0 ID=cds-WP_000444561.1;Parent=gene-AB69_RS02835;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AB69_RS02835;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 86958 87572 . + . ID=gene-AB69_RS02830;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AB69_RS02830;old_locus_tag=AB69_4210 NZ_JHDO01000120.1 Protein Homology CDS 86958 87572 . + 0 ID=cds-WP_001308167.1;Parent=gene-AB69_RS02830;Dbxref=GenBank:WP_001308167.1;Name=WP_001308167.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418290.4;locus_tag=AB69_RS02830;product=IMPACT family protein;protein_id=WP_001308167.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 87611 89062 . + . ID=gene-AB69_RS02825;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AB69_RS02825;old_locus_tag=AB69_4211 NZ_JHDO01000120.1 Protein Homology CDS 87611 89062 . + 0 ID=cds-WP_000545677.1;Parent=gene-AB69_RS02825;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AB69_RS02825;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 89074 89619 . + . ID=gene-AB69_RS02820;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AB69_RS02820;old_locus_tag=AB69_4212 NZ_JHDO01000120.1 Protein Homology CDS 89074 89619 . + 0 ID=cds-WP_000853959.1;Parent=gene-AB69_RS02820;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AB69_RS02820;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 NZ_JHDO01000120.1 RefSeq gene 89997 90943 . + . ID=gene-AB69_RS02815;Name=AB69_RS02815;end_range=90943,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS02815;old_locus_tag=AB69_4213;partial=true NZ_JHDO01000120.1 cmsearch rRNA 89997 90943 . + . ID=rna-AB69_RS02815;Parent=gene-AB69_RS02815;Dbxref=RFAM:RF00177;end_range=90943,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02815;partial=true;product=16S ribosomal RNA NZ_JHDO01000120.1 cmsearch exon 89997 90943 . + . ID=exon-AB69_RS02815-1;Parent=rna-AB69_RS02815;Dbxref=RFAM:RF00177;end_range=90943,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02815;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000121.1 1 1482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000121.1 RefSeq region 1 1482 . + . ID=NZ_JHDO01000121.1:1..1482;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000121.1 RefSeq gene 1 1168 . + . ID=gene-AB69_RS0125360;Name=AB69_RS0125360;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125360;partial=true;start_range=.,1 NZ_JHDO01000121.1 cmsearch rRNA 1 1168 . + . ID=rna-AB69_RS0125360;Parent=gene-AB69_RS0125360;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125360;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000121.1 cmsearch exon 1 1168 . + . ID=exon-AB69_RS0125360-1;Parent=rna-AB69_RS0125360;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125360;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000121.1 RefSeq gene 1264 1379 . + . ID=gene-AB69_RS02810;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS02810;old_locus_tag=AB69_4216 NZ_JHDO01000121.1 cmsearch rRNA 1264 1379 . + . ID=rna-AB69_RS02810;Parent=gene-AB69_RS02810;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02810;product=5S ribosomal RNA NZ_JHDO01000121.1 cmsearch exon 1264 1379 . + . ID=exon-AB69_RS02810-1;Parent=rna-AB69_RS02810;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02810;product=5S ribosomal RNA ##sequence-region NZ_JHDO01000122.1 1 1454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000122.1 RefSeq region 1 1454 . + . ID=NZ_JHDO01000122.1:1..1454;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000122.1 RefSeq gene 1 1168 . + . ID=gene-AB69_RS0125365;Name=AB69_RS0125365;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125365;partial=true;start_range=.,1 NZ_JHDO01000122.1 cmsearch rRNA 1 1168 . + . ID=rna-AB69_RS0125365;Parent=gene-AB69_RS0125365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125365;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000122.1 cmsearch exon 1 1168 . + . ID=exon-AB69_RS0125365-1;Parent=rna-AB69_RS0125365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125365;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000122.1 RefSeq gene 1263 1378 . + . ID=gene-AB69_RS02805;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS02805;old_locus_tag=AB69_4217 NZ_JHDO01000122.1 cmsearch rRNA 1263 1378 . + . ID=rna-AB69_RS02805;Parent=gene-AB69_RS02805;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02805;product=5S ribosomal RNA NZ_JHDO01000122.1 cmsearch exon 1263 1378 . + . ID=exon-AB69_RS02805-1;Parent=rna-AB69_RS02805;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS02805;product=5S ribosomal RNA ##sequence-region NZ_JHDO01000123.1 1 112655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000123.1 RefSeq region 1 112655 . + . ID=NZ_JHDO01000123.1:1..112655;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000123.1 RefSeq gene 1 76 . + . ID=gene-AB69_RS30905;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS30905;partial=true;start_range=.,1 NZ_JHDO01000123.1 cmsearch rRNA 1 76 . + . ID=rna-AB69_RS30905;Parent=gene-AB69_RS30905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS30905;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JHDO01000123.1 cmsearch exon 1 76 . + . ID=exon-AB69_RS30905-1;Parent=rna-AB69_RS30905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS30905;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JHDO01000123.1 RefSeq gene 348 875 . - . ID=gene-AB69_RS02800;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AB69_RS02800;old_locus_tag=AB69_4219 NZ_JHDO01000123.1 Protein Homology CDS 348 875 . - 0 ID=cds-WP_000907622.1;Parent=gene-AB69_RS02800;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AB69_RS02800;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 857 1441 . - . ID=gene-AB69_RS02795;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AB69_RS02795;old_locus_tag=AB69_4220 NZ_JHDO01000123.1 Protein Homology CDS 857 1441 . - 0 ID=cds-WP_001052181.1;Parent=gene-AB69_RS02795;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AB69_RS02795;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 1511 1780 . + . ID=gene-AB69_RS02790;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AB69_RS02790;old_locus_tag=AB69_4221 NZ_JHDO01000123.1 Protein Homology CDS 1511 1780 . + 0 ID=cds-WP_001295263.1;Parent=gene-AB69_RS02790;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AB69_RS02790;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 1857 2843 . + . ID=gene-AB69_RS02785;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AB69_RS02785;old_locus_tag=AB69_4222 NZ_JHDO01000123.1 Protein Homology CDS 1857 2843 . + 0 ID=cds-WP_001065497.1;Parent=gene-AB69_RS02785;Dbxref=GenBank:WP_001065497.1;Name=WP_001065497.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418296.1;locus_tag=AB69_RS02785;product=stress response kinase SrkA;protein_id=WP_001065497.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 2860 3486 . + . ID=gene-AB69_RS02780;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AB69_RS02780;old_locus_tag=AB69_4223 NZ_JHDO01000123.1 Protein Homology CDS 2860 3486 . + 0 ID=cds-WP_000725337.1;Parent=gene-AB69_RS02780;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AB69_RS02780;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 3641 5071 . + . ID=gene-AB69_RS02775;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=protein_coding;locus_tag=AB69_RS02775;old_locus_tag=AB69_4224 NZ_JHDO01000123.1 Protein Homology CDS 3641 5071 . + 0 ID=cds-WP_032231576.1;Parent=gene-AB69_RS02775;Dbxref=GenBank:WP_032231576.1;Name=WP_032231576.1;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AB69_RS02775;product=YdgA family protein;protein_id=WP_032231576.1;transl_table=11 NZ_JHDO01000123.1 RefSeq pseudogene 5112 6043 . - . ID=gene-AB69_RS0125370;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=pseudogene;locus_tag=AB69_RS0125370;pseudo=true NZ_JHDO01000123.1 Protein Homology CDS 5112 6043 . - 0 ID=cds-AB69_RS0125370;Parent=gene-AB69_RS0125370;Note=frameshifted;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418299.1;locus_tag=AB69_RS0125370;product=acyltransferase;pseudo=true;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 6407 9193 . + . ID=gene-AB69_RS02770;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AB69_RS02770;old_locus_tag=AB69_4228 NZ_JHDO01000123.1 Protein Homology CDS 6407 9193 . + 0 ID=cds-WP_000250006.1;Parent=gene-AB69_RS02770;Dbxref=GenBank:WP_000250006.1;Name=WP_000250006.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AB69_RS02770;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 9574 10206 . - . ID=gene-AB69_RS02765;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AB69_RS02765;old_locus_tag=AB69_4231 NZ_JHDO01000123.1 Protein Homology CDS 9574 10206 . - 0 ID=cds-WP_000183349.1;Parent=gene-AB69_RS02765;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AB69_RS02765;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JHDO01000123.1 RefSeq pseudogene 10503 10669 . + . ID=gene-AB69_RS30485;Name=AB69_RS30485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30485;pseudo=true NZ_JHDO01000123.1 Protein Homology CDS 10503 10669 . + 0 ID=cds-AB69_RS30485;Parent=gene-AB69_RS30485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AB69_RS30485;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 10788 11297 . + . ID=gene-AB69_RS02760;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AB69_RS02760;old_locus_tag=AB69_4232 NZ_JHDO01000123.1 Protein Homology CDS 10788 11297 . + 0 ID=cds-WP_001295266.1;Parent=gene-AB69_RS02760;Dbxref=GenBank:WP_001295266.1;Name=WP_001295266.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=AB69_RS02760;product=Der GTPase-activating protein YihI;protein_id=WP_001295266.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 11486 12859 . + . ID=gene-AB69_RS02755;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AB69_RS02755;old_locus_tag=AB69_4234 NZ_JHDO01000123.1 Protein Homology CDS 11486 12859 . + 0 ID=cds-WP_000116090.1;Parent=gene-AB69_RS02755;Dbxref=GenBank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AB69_RS02755;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 13088 13198 . - . ID=gene-AB69_RS0125380;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AB69_RS0125380 NZ_JHDO01000123.1 Protein Homology CDS 13088 13198 . - 0 ID=cds-WP_000893994.1;Parent=gene-AB69_RS0125380;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AB69_RS0125380;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 13310 14719 . - . ID=gene-AB69_RS02750;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AB69_RS02750;old_locus_tag=AB69_4237 NZ_JHDO01000123.1 Protein Homology CDS 13310 14719 . - 0 ID=cds-WP_001188777.1;Parent=gene-AB69_RS02750;Dbxref=GenBank:WP_001188777.1;Name=WP_001188777.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AB69_RS02750;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 14731 15780 . - . ID=gene-AB69_RS02745;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AB69_RS02745;old_locus_tag=AB69_4238 NZ_JHDO01000123.1 Protein Homology CDS 14731 15780 . - 0 ID=cds-WP_000190577.1;Parent=gene-AB69_RS02745;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AB69_RS02745;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 16066 17475 . - . ID=gene-AB69_RS02740;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AB69_RS02740;old_locus_tag=AB69_4239 NZ_JHDO01000123.1 Protein Homology CDS 16066 17475 . - 0 ID=cds-WP_001271717.1;Parent=gene-AB69_RS02740;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AB69_RS02740;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 17848 19671 . + . ID=gene-AB69_RS02735;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AB69_RS02735;old_locus_tag=AB69_4240 NZ_JHDO01000123.1 Protein Homology CDS 17848 19671 . + 0 ID=cds-WP_000570668.1;Parent=gene-AB69_RS02735;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AB69_RS02735;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 19888 20598 . + . ID=gene-AB69_RS02730;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AB69_RS02730;old_locus_tag=AB69_4241 NZ_JHDO01000123.1 Protein Homology CDS 19888 20598 . + 0 ID=cds-WP_000829798.1;Parent=gene-AB69_RS02730;Dbxref=GenBank:WP_000829798.1;Name=WP_000829798.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AB69_RS02730;product=GntR family transcriptional regulator;protein_id=WP_000829798.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 20606 21586 . + . ID=gene-AB69_RS02725;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AB69_RS02725;old_locus_tag=AB69_4242 NZ_JHDO01000123.1 Protein Homology CDS 20606 21586 . + 0 ID=cds-WP_000256396.1;Parent=gene-AB69_RS02725;Dbxref=GenBank:WP_000256396.1;Name=WP_000256396.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AB69_RS02725;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000256396.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 21688 22953 . + . ID=gene-AB69_RS02720;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AB69_RS02720;old_locus_tag=AB69_4243 NZ_JHDO01000123.1 Protein Homology CDS 21688 22953 . + 0 ID=cds-WP_000956313.1;Parent=gene-AB69_RS02720;Dbxref=GenBank:WP_000956313.1;Name=WP_000956313.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418310.1;locus_tag=AB69_RS02720;product=MFS transporter;protein_id=WP_000956313.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 23044 23736 . - . ID=gene-AB69_RS02715;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AB69_RS02715;old_locus_tag=AB69_4244 NZ_JHDO01000123.1 Protein Homology CDS 23044 23736 . - 0 ID=cds-WP_000723465.1;Parent=gene-AB69_RS02715;Dbxref=GenBank:WP_000723465.1;Name=WP_000723465.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AB69_RS02715;product=porin OmpL;protein_id=WP_000723465.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 23804 25207 . - . ID=gene-AB69_RS02710;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;locus_tag=AB69_RS02710;old_locus_tag=AB69_4245 NZ_JHDO01000123.1 Protein Homology CDS 23804 25207 . - 0 ID=cds-WP_001295267.1;Parent=gene-AB69_RS02710;Dbxref=GenBank:WP_001295267.1;Name=WP_001295267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihO;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026275.1;locus_tag=AB69_RS02710;product=MFS transporter;protein_id=WP_001295267.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 25250 26635 . - . ID=gene-AB69_RS02705;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;locus_tag=AB69_RS02705;old_locus_tag=AB69_4246 NZ_JHDO01000123.1 Protein Homology CDS 25250 26635 . - 0 ID=cds-WP_001489146.1;Parent=gene-AB69_RS02705;Dbxref=GenBank:WP_001489146.1;Name=WP_001489146.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418313.4;locus_tag=AB69_RS02705;product=MFS transporter;protein_id=WP_001489146.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 26681 28717 . - . ID=gene-AB69_RS02700;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AB69_RS02700;old_locus_tag=AB69_4247 NZ_JHDO01000123.1 Protein Homology CDS 26681 28717 . - 0 ID=cds-WP_000380843.1;Parent=gene-AB69_RS02700;Dbxref=GenBank:WP_000380843.1;Name=WP_000380843.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418314.1;locus_tag=AB69_RS02700;product=sulfoquinovosidase;protein_id=WP_000380843.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 28916 29818 . - . ID=gene-AB69_RS02695;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;locus_tag=AB69_RS02695;old_locus_tag=AB69_4248 NZ_JHDO01000123.1 Protein Homology CDS 28916 29818 . - 0 ID=cds-WP_001295268.1;Parent=gene-AB69_RS02695;Dbxref=GenBank:WP_001295268.1;Name=WP_001295268.1;gbkey=CDS;gene=yihR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709679.2;locus_tag=AB69_RS02695;product=aldose-1-epimerase;protein_id=WP_001295268.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 29956 31197 . - . ID=gene-AB69_RS02690;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AB69_RS02690;old_locus_tag=AB69_4249 NZ_JHDO01000123.1 Protein Homology CDS 29956 31197 . - 0 ID=cds-WP_000870916.1;Parent=gene-AB69_RS02690;Dbxref=GenBank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AB69_RS02690;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 31214 32092 . - . ID=gene-AB69_RS02685;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AB69_RS02685;old_locus_tag=AB69_4250 NZ_JHDO01000123.1 Protein Homology CDS 31214 32092 . - 0 ID=cds-WP_001046453.1;Parent=gene-AB69_RS02685;Dbxref=GenBank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AB69_RS02685;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 32116 33012 . - . ID=gene-AB69_RS02680;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AB69_RS02680;old_locus_tag=AB69_4251 NZ_JHDO01000123.1 Protein Homology CDS 32116 33012 . - 0 ID=cds-WP_000718893.1;Parent=gene-AB69_RS02680;Dbxref=GenBank:WP_000718893.1;Name=WP_000718893.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AB69_RS02680;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718893.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 33180 34076 . + . ID=gene-AB69_RS02675;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AB69_RS02675;old_locus_tag=AB69_4252 NZ_JHDO01000123.1 Protein Homology CDS 33180 34076 . + 0 ID=cds-WP_000621656.1;Parent=gene-AB69_RS02675;Dbxref=GenBank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AB69_RS02675;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 34110 34895 . + . ID=gene-AB69_RS02670;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AB69_RS02670;old_locus_tag=AB69_4253 NZ_JHDO01000123.1 Protein Homology CDS 34110 34895 . + 0 ID=cds-WP_000059678.1;Parent=gene-AB69_RS02670;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AB69_RS02670;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 34994 35593 . + . ID=gene-AB69_RS02665;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AB69_RS02665;old_locus_tag=AB69_4254 NZ_JHDO01000123.1 Protein Homology CDS 34994 35593 . + 0 ID=cds-WP_001295269.1;Parent=gene-AB69_RS02665;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AB69_RS02665;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 35587 36459 . + . ID=gene-AB69_RS02660;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AB69_RS02660;old_locus_tag=AB69_4255 NZ_JHDO01000123.1 Protein Homology CDS 35587 36459 . + 0 ID=cds-WP_000920762.1;Parent=gene-AB69_RS02660;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AB69_RS02660;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 36456 36893 . + . ID=gene-AB69_RS02655;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AB69_RS02655;old_locus_tag=AB69_4256 NZ_JHDO01000123.1 Protein Homology CDS 36456 36893 . + 0 ID=cds-WP_000560983.1;Parent=gene-AB69_RS02655;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AB69_RS02655;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 36938 37879 . + . ID=gene-AB69_RS02650;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AB69_RS02650;old_locus_tag=AB69_4257 NZ_JHDO01000123.1 Protein Homology CDS 36938 37879 . + 0 ID=cds-WP_001297068.1;Parent=gene-AB69_RS02650;Dbxref=GenBank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AB69_RS02650;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11 NZ_JHDO01000123.1 RefSeq pseudogene 38239 38355 . + . ID=gene-AB69_RS30910;Name=AB69_RS30910;end_range=38355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30910;partial=true;pseudo=true NZ_JHDO01000123.1 Protein Homology CDS 38239 38355 . + 0 ID=cds-AB69_RS30910;Parent=gene-AB69_RS30910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=38355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AB69_RS30910;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 38732 38950 . + . ID=gene-AB69_RS02645;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AB69_RS02645;old_locus_tag=AB69_4258 NZ_JHDO01000123.1 Protein Homology CDS 38732 38950 . + 0 ID=cds-WP_001295676.1;Parent=gene-AB69_RS02645;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AB69_RS02645;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 39168 39410 . + . ID=gene-AB69_RS02640;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AB69_RS02640;old_locus_tag=AB69_4259 NZ_JHDO01000123.1 Protein Homology CDS 39168 39410 . + 0 ID=cds-WP_001086388.1;Parent=gene-AB69_RS02640;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AB69_RS02640;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 39740 40669 . - . ID=gene-AB69_RS02635;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AB69_RS02635;old_locus_tag=AB69_4260 NZ_JHDO01000123.1 Protein Homology CDS 39740 40669 . - 0 ID=cds-WP_000027703.1;Parent=gene-AB69_RS02635;Dbxref=GenBank:WP_000027703.1;Name=WP_000027703.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AB69_RS02635;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027703.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 40666 41301 . - . ID=gene-AB69_RS02630;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AB69_RS02630;old_locus_tag=AB69_4261 NZ_JHDO01000123.1 Protein Homology CDS 40666 41301 . - 0 ID=cds-WP_000829013.1;Parent=gene-AB69_RS02630;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AB69_RS02630;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 41298 42200 . - . ID=gene-AB69_RS02625;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AB69_RS02625;old_locus_tag=AB69_4262 NZ_JHDO01000123.1 Protein Homology CDS 41298 42200 . - 0 ID=cds-WP_000331377.1;Parent=gene-AB69_RS02625;Dbxref=GenBank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AB69_RS02625;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 42213 45263 . - . ID=gene-AB69_RS02620;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB69_RS02620;old_locus_tag=AB69_4263 NZ_JHDO01000123.1 Protein Homology CDS 42213 45263 . - 0 ID=cds-WP_010723259.1;Parent=gene-AB69_RS02620;Dbxref=GenBank:WP_010723259.1;Name=WP_010723259.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AB69_RS02620;product=formate dehydrogenase-N subunit alpha;protein_id=WP_010723259.1;transl_except=(pos:complement(44676..44678)%2Caa:Sec);transl_table=11 NZ_JHDO01000123.1 RefSeq gene 45457 46290 . + . ID=gene-AB69_RS02610;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AB69_RS02610;old_locus_tag=AB69_4266 NZ_JHDO01000123.1 Protein Homology CDS 45457 46290 . + 0 ID=cds-WP_000753617.1;Parent=gene-AB69_RS02610;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AB69_RS02610;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 46443 47498 . + . ID=gene-AB69_RS02605;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AB69_RS02605;old_locus_tag=AB69_4267 NZ_JHDO01000123.1 Protein Homology CDS 46443 47498 . + 0 ID=cds-WP_001295677.1;Parent=gene-AB69_RS02605;Dbxref=GenBank:WP_001295677.1;Name=WP_001295677.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AB69_RS02605;product=YiiG family protein;protein_id=WP_001295677.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 47548 49296 . - . ID=gene-AB69_RS02600;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=AB69_RS02600;old_locus_tag=AB69_4268 NZ_JHDO01000123.1 Protein Homology CDS 47548 49296 . - 0 ID=cds-WP_032231577.1;Parent=gene-AB69_RS02600;Dbxref=GenBank:WP_032231577.1;Name=WP_032231577.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AB69_RS02600;product=putative frv operon regulatory protein;protein_id=WP_032231577.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 49296 50366 . - . ID=gene-AB69_RS02595;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AB69_RS02595;old_locus_tag=AB69_4269 NZ_JHDO01000123.1 Protein Homology CDS 49296 50366 . - 0 ID=cds-WP_001019484.1;Parent=gene-AB69_RS02595;Dbxref=GenBank:WP_001019484.1;Name=WP_001019484.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AB69_RS02595;product=aminopeptidase;protein_id=WP_001019484.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 50356 51807 . - . ID=gene-AB69_RS02590;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AB69_RS02590;old_locus_tag=AB69_4270 NZ_JHDO01000123.1 Protein Homology CDS 50356 51807 . - 0 ID=cds-WP_032231579.1;Parent=gene-AB69_RS02590;Dbxref=GenBank:WP_032231579.1;Name=WP_032231579.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AB69_RS02590;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_032231579.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 51818 52264 . - . ID=gene-AB69_RS02585;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AB69_RS02585;old_locus_tag=AB69_4271 NZ_JHDO01000123.1 Protein Homology CDS 51818 52264 . - 0 ID=cds-WP_000729595.1;Parent=gene-AB69_RS02585;Dbxref=GenBank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AB69_RS02585;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 52565 52879 . - . ID=gene-AB69_RS02580;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AB69_RS02580;old_locus_tag=AB69_4273 NZ_JHDO01000123.1 Protein Homology CDS 52565 52879 . - 0 ID=cds-WP_000619493.1;Parent=gene-AB69_RS02580;Dbxref=GenBank:WP_000619493.1;Name=WP_000619493.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AB69_RS02580;product=L-rhamnose mutarotase;protein_id=WP_000619493.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 52889 53713 . - . ID=gene-AB69_RS02575;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AB69_RS02575;old_locus_tag=AB69_4274 NZ_JHDO01000123.1 Protein Homology CDS 52889 53713 . - 0 ID=cds-WP_001179745.1;Parent=gene-AB69_RS02575;Dbxref=GenBank:WP_001179745.1;Name=WP_001179745.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AB69_RS02575;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179745.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 53980 55239 . - . ID=gene-AB69_RS02570;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AB69_RS02570;old_locus_tag=AB69_4275 NZ_JHDO01000123.1 Protein Homology CDS 53980 55239 . - 0 ID=cds-WP_001311268.1;Parent=gene-AB69_RS02570;Dbxref=GenBank:WP_001311268.1;Name=WP_001311268.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AB69_RS02570;product=L-rhamnose isomerase;protein_id=WP_001311268.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 55236 56705 . - . ID=gene-AB69_RS02565;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AB69_RS02565;old_locus_tag=AB69_4276 NZ_JHDO01000123.1 Protein Homology CDS 55236 56705 . - 0 ID=cds-WP_000144073.1;Parent=gene-AB69_RS02565;Dbxref=GenBank:WP_000144073.1;Name=WP_000144073.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418340.1;locus_tag=AB69_RS02565;product=rhamnulokinase;protein_id=WP_000144073.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 56993 57829 . + . ID=gene-AB69_RS02555;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AB69_RS02555;old_locus_tag=AB69_4278 NZ_JHDO01000123.1 Protein Homology CDS 56993 57829 . + 0 ID=cds-WP_000217137.1;Parent=gene-AB69_RS02555;Dbxref=GenBank:WP_000217137.1;Name=WP_000217137.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AB69_RS02555;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217137.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 57903 58751 . + . ID=gene-AB69_RS02550;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AB69_RS02550;old_locus_tag=AB69_4279 NZ_JHDO01000123.1 Protein Homology CDS 57903 58751 . + 0 ID=cds-WP_001336056.1;Parent=gene-AB69_RS02550;Dbxref=GenBank:WP_001336056.1;Name=WP_001336056.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AB69_RS02550;product=HTH-type transcriptional activator RhaR;protein_id=WP_001336056.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 58748 59782 . - . ID=gene-AB69_RS02545;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AB69_RS02545;old_locus_tag=AB69_4280 NZ_JHDO01000123.1 Protein Homology CDS 58748 59782 . - 0 ID=cds-WP_000063517.1;Parent=gene-AB69_RS02545;Dbxref=GenBank:WP_000063517.1;Name=WP_000063517.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AB69_RS02545;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063517.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 60067 60687 . + . ID=gene-AB69_RS02540;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AB69_RS02540;old_locus_tag=AB69_4281 NZ_JHDO01000123.1 Protein Homology CDS 60067 60687 . + 0 ID=cds-WP_000122641.1;Parent=gene-AB69_RS02540;Dbxref=GenBank:WP_000122641.1;Name=WP_000122641.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AB69_RS02540;product=superoxide dismutase [Mn];protein_id=WP_000122641.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 60947 61930 . + . ID=gene-AB69_RS02530;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AB69_RS02530;old_locus_tag=AB69_4283 NZ_JHDO01000123.1 Protein Homology CDS 60947 61930 . + 0 ID=cds-WP_001166063.1;Parent=gene-AB69_RS02530;Dbxref=GenBank:WP_001166063.1;Name=WP_001166063.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AB69_RS02530;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166063.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 62079 62753 . + . ID=gene-AB69_RS02525;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AB69_RS02525;old_locus_tag=AB69_4284 NZ_JHDO01000123.1 Protein Homology CDS 62079 62753 . + 0 ID=cds-WP_001270260.1;Parent=gene-AB69_RS02525;Dbxref=GenBank:WP_001270260.1;Name=WP_001270260.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AB69_RS02525;product=6-hydroxyaminopurine reductase;protein_id=WP_001270260.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 62859 64232 . - . ID=gene-AB69_RS02520;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AB69_RS02520;old_locus_tag=AB69_4285 NZ_JHDO01000123.1 Protein Homology CDS 62859 64232 . - 0 ID=cds-WP_000580417.1;Parent=gene-AB69_RS02520;Dbxref=GenBank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AB69_RS02520;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 64229 64927 . - . ID=gene-AB69_RS02515;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AB69_RS02515;old_locus_tag=AB69_4286 NZ_JHDO01000123.1 Protein Homology CDS 64229 64927 . - 0 ID=cds-WP_001033722.1;Parent=gene-AB69_RS02515;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AB69_RS02515;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 65077 65577 . + . ID=gene-AB69_RS02510;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AB69_RS02510;old_locus_tag=AB69_4287 NZ_JHDO01000123.1 Protein Homology CDS 65077 65577 . + 0 ID=cds-WP_001223800.1;Parent=gene-AB69_RS02510;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AB69_RS02510;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 65726 66628 . + . ID=gene-AB69_RS02505;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AB69_RS02505;old_locus_tag=AB69_4288 NZ_JHDO01000123.1 Protein Homology CDS 65726 66628 . + 0 ID=cds-WP_001076742.1;Parent=gene-AB69_RS02505;Dbxref=GenBank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AB69_RS02505;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 66809 67771 . + . ID=gene-AB69_RS02500;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AB69_RS02500;old_locus_tag=AB69_4289 NZ_JHDO01000123.1 Protein Homology CDS 66809 67771 . + 0 ID=cds-WP_000591795.1;Parent=gene-AB69_RS02500;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AB69_RS02500;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 68091 69080 . + . ID=gene-AB69_RS02495;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AB69_RS02495;old_locus_tag=AB69_4290 NZ_JHDO01000123.1 Protein Homology CDS 68091 69080 . + 0 ID=cds-WP_001045689.1;Parent=gene-AB69_RS02495;Dbxref=GenBank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AB69_RS02495;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 69187 69942 . + . ID=gene-AB69_RS02490;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AB69_RS02490;old_locus_tag=AB69_4291 NZ_JHDO01000123.1 Protein Homology CDS 69187 69942 . + 0 ID=cds-WP_001326656.1;Parent=gene-AB69_RS02490;Dbxref=GenBank:WP_001326656.1;Name=WP_001326656.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418353.1;locus_tag=AB69_RS02490;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001326656.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 69997 70764 . - . ID=gene-AB69_RS02485;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AB69_RS02485;old_locus_tag=AB69_4292 NZ_JHDO01000123.1 Protein Homology CDS 69997 70764 . - 0 ID=cds-WP_001216325.1;Parent=gene-AB69_RS02485;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AB69_RS02485;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 70872 71471 . - . ID=gene-AB69_RS02480;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AB69_RS02480;old_locus_tag=AB69_4293 NZ_JHDO01000123.1 Protein Homology CDS 70872 71471 . - 0 ID=cds-WP_000802214.1;Parent=gene-AB69_RS02480;Dbxref=GenBank:WP_000802214.1;Name=WP_000802214.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AB69_RS02480;product=YiiQ family protein;protein_id=WP_000802214.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 71572 72012 . + . ID=gene-AB69_RS02475;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AB69_RS02475;old_locus_tag=AB69_4294 NZ_JHDO01000123.1 Protein Homology CDS 71572 72012 . + 0 ID=cds-WP_000155257.1;Parent=gene-AB69_RS02475;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AB69_RS02475;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 72224 72523 . + . ID=gene-AB69_RS02470;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AB69_RS02470;old_locus_tag=AB69_4295 NZ_JHDO01000123.1 Protein Homology CDS 72224 72523 . + 0 ID=cds-WP_000655989.1;Parent=gene-AB69_RS02470;Dbxref=GenBank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418357.1;locus_tag=AB69_RS02470;product=DUF406 domain-containing protein;protein_id=WP_000655989.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 72550 72978 . + . ID=gene-AB69_RS02465;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AB69_RS02465;old_locus_tag=AB69_4296 NZ_JHDO01000123.1 Protein Homology CDS 72550 72978 . + 0 ID=cds-WP_000323556.1;Parent=gene-AB69_RS02465;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AB69_RS02465;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 72983 73729 . - . ID=gene-AB69_RS02460;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AB69_RS02460;old_locus_tag=AB69_4297 NZ_JHDO01000123.1 Protein Homology CDS 72983 73729 . - 0 ID=cds-WP_000796332.1;Parent=gene-AB69_RS02460;Dbxref=GenBank:WP_000796332.1;Name=WP_000796332.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418359.1;locus_tag=AB69_RS02460;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 73826 74836 . - . ID=gene-AB69_RS02455;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB69_RS02455;old_locus_tag=AB69_4298 NZ_JHDO01000123.1 Protein Homology CDS 73826 74836 . - 0 ID=cds-WP_001250644.1;Parent=gene-AB69_RS02455;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AB69_RS02455;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 74971 76479 . - . ID=gene-AB69_RS02450;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AB69_RS02450;old_locus_tag=AB69_4299 NZ_JHDO01000123.1 Protein Homology CDS 74971 76479 . - 0 ID=cds-WP_000136788.1;Parent=gene-AB69_RS02450;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AB69_RS02450;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 76502 77347 . - . ID=gene-AB69_RS02445;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AB69_RS02445;old_locus_tag=AB69_4300 NZ_JHDO01000123.1 Protein Homology CDS 76502 77347 . - 0 ID=cds-WP_000084268.1;Parent=gene-AB69_RS02445;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AB69_RS02445;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 77772 78017 . + . ID=gene-AB69_RS02440;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AB69_RS02440;old_locus_tag=AB69_4301 NZ_JHDO01000123.1 Protein Homology CDS 77772 78017 . + 0 ID=cds-WP_001296623.1;Parent=gene-AB69_RS02440;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AB69_RS02440;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 78102 78587 . - . ID=gene-AB69_RS02435;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AB69_RS02435;old_locus_tag=AB69_4302 NZ_JHDO01000123.1 Protein Homology CDS 78102 78587 . - 0 ID=cds-WP_032231581.1;Parent=gene-AB69_RS02435;Dbxref=GenBank:WP_032231581.1;Name=WP_032231581.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AB69_RS02435;product=ribonuclease E activity regulator RraA;protein_id=WP_032231581.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 78680 79606 . - . ID=gene-AB69_RS02430;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AB69_RS02430;old_locus_tag=AB69_4303 NZ_JHDO01000123.1 Protein Homology CDS 78680 79606 . - 0 ID=cds-WP_000139496.1;Parent=gene-AB69_RS02430;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AB69_RS02430;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 79673 81004 . - . ID=gene-AB69_RS02425;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AB69_RS02425;old_locus_tag=AB69_4304 NZ_JHDO01000123.1 Protein Homology CDS 79673 81004 . - 0 ID=cds-WP_001293341.1;Parent=gene-AB69_RS02425;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AB69_RS02425;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 81014 81544 . - . ID=gene-AB69_RS02420;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AB69_RS02420;old_locus_tag=AB69_4305 NZ_JHDO01000123.1 Protein Homology CDS 81014 81544 . - 0 ID=cds-WP_000208242.1;Parent=gene-AB69_RS02420;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AB69_RS02420;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 81637 82596 . - . ID=gene-AB69_RS02415;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AB69_RS02415;old_locus_tag=AB69_4306 NZ_JHDO01000123.1 Protein Homology CDS 81637 82596 . - 0 ID=cds-WP_000068828.1;Parent=gene-AB69_RS02415;Dbxref=GenBank:WP_000068828.1;Name=WP_000068828.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AB69_RS02415;product=cell division protein FtsN;protein_id=WP_000068828.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 82688 83713 . - . ID=gene-AB69_RS02410;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AB69_RS02410;old_locus_tag=AB69_4307 NZ_JHDO01000123.1 Protein Homology CDS 82688 83713 . - 0 ID=cds-WP_000644904.1;Parent=gene-AB69_RS02410;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AB69_RS02410;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 83869 86067 . - . ID=gene-AB69_RS02405;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AB69_RS02405;old_locus_tag=AB69_4309 NZ_JHDO01000123.1 Protein Homology CDS 83869 86067 . - 0 ID=cds-WP_032231582.1;Parent=gene-AB69_RS02405;Dbxref=GenBank:WP_032231582.1;Name=WP_032231582.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AB69_RS02405;product=primosomal protein N';protein_id=WP_032231582.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 86270 86482 . + . ID=gene-AB69_RS02400;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AB69_RS02400;old_locus_tag=AB69_4310 NZ_JHDO01000123.1 Protein Homology CDS 86270 86482 . + 0 ID=cds-WP_000710769.1;Parent=gene-AB69_RS02400;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AB69_RS02400;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 86543 87151 . - . ID=gene-AB69_RS02395;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AB69_RS02395;old_locus_tag=AB69_4311 NZ_JHDO01000123.1 Protein Homology CDS 86543 87151 . - 0 ID=cds-WP_000797353.1;Parent=gene-AB69_RS02395;Dbxref=GenBank:WP_000797353.1;Name=WP_000797353.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418372.1;locus_tag=AB69_RS02395;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797353.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 87335 87652 . - . ID=gene-AB69_RS02390;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AB69_RS02390;old_locus_tag=AB69_4312 NZ_JHDO01000123.1 Protein Homology CDS 87335 87652 . - 0 ID=cds-WP_000852812.1;Parent=gene-AB69_RS02390;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AB69_RS02390;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 87929 89089 . + . ID=gene-AB69_RS02385;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AB69_RS02385;old_locus_tag=AB69_4313 NZ_JHDO01000123.1 Protein Homology CDS 87929 89089 . + 0 ID=cds-WP_001295694.1;Parent=gene-AB69_RS02385;Dbxref=GenBank:WP_001295694.1;Name=WP_001295694.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AB69_RS02385;product=cystathionine gamma-synthase;protein_id=WP_001295694.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 89092 91524 . + . ID=gene-AB69_RS02380;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AB69_RS02380;old_locus_tag=AB69_4314 NZ_JHDO01000123.1 Protein Homology CDS 89092 91524 . + 0 ID=cds-WP_000110772.1;Parent=gene-AB69_RS02380;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AB69_RS02380;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 91663 91797 . - . ID=gene-AB69_RS30650;Name=AB69_RS30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30650;old_locus_tag=AB69_4315 NZ_JHDO01000123.1 GeneMarkS-2+ CDS 91663 91797 . - 0 ID=cds-WP_000660586.1;Parent=gene-AB69_RS30650;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS30650;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 91873 92763 . + . ID=gene-AB69_RS02370;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AB69_RS02370;old_locus_tag=AB69_4316 NZ_JHDO01000123.1 Protein Homology CDS 91873 92763 . + 0 ID=cds-WP_000007523.1;Parent=gene-AB69_RS02370;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AB69_RS02370;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 93092 95272 . + . ID=gene-AB69_RS02365;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AB69_RS02365;old_locus_tag=AB69_4317 NZ_JHDO01000123.1 Protein Homology CDS 93092 95272 . + 0 ID=cds-WP_001295695.1;Parent=gene-AB69_RS02365;Dbxref=GenBank:WP_001295695.1;Name=WP_001295695.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=AB69_RS02365;product=catalase/peroxidase HPI;protein_id=WP_001295695.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 95365 96270 . + . ID=gene-AB69_RS02360;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AB69_RS02360;old_locus_tag=AB69_4318 NZ_JHDO01000123.1 Protein Homology CDS 95365 96270 . + 0 ID=cds-WP_001271242.1;Parent=gene-AB69_RS02360;Dbxref=GenBank:WP_001271242.1;Name=WP_001271242.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AB69_RS02360;product=cystine transporter YijE;protein_id=WP_001271242.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 96297 96914 . - . ID=gene-AB69_RS02355;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AB69_RS02355;old_locus_tag=AB69_4319 NZ_JHDO01000123.1 Protein Homology CDS 96297 96914 . - 0 ID=cds-WP_000647891.1;Parent=gene-AB69_RS02355;Dbxref=GenBank:WP_000647891.1;Name=WP_000647891.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AB69_RS02355;product=DUF1287 domain-containing protein;protein_id=WP_000647891.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 97189 98292 . - . ID=gene-AB69_RS02350;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AB69_RS02350;old_locus_tag=AB69_4320 NZ_JHDO01000123.1 Protein Homology CDS 97189 98292 . - 0 ID=cds-WP_032231583.1;Parent=gene-AB69_RS02350;Dbxref=GenBank:WP_032231583.1;Name=WP_032231583.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AB69_RS02350;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_032231583.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 98303 98965 . - . ID=gene-AB69_RS02345;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB69_RS02345;old_locus_tag=AB69_4321 NZ_JHDO01000123.1 Protein Homology CDS 98303 98965 . - 0 ID=cds-WP_000424840.1;Parent=gene-AB69_RS02345;Dbxref=GenBank:WP_000424840.1;Name=WP_000424840.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AB69_RS02345;product=fructose-6-phosphate aldolase;protein_id=WP_000424840.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 98977 101478 . - . ID=gene-AB69_RS02340;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB69_RS02340;old_locus_tag=AB69_4322 NZ_JHDO01000123.1 Protein Homology CDS 98977 101478 . - 0 ID=cds-WP_001174077.1;Parent=gene-AB69_RS02340;Dbxref=GenBank:WP_001174077.1;Name=WP_001174077.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AB69_RS02340;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001174077.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 101787 102866 . + . ID=gene-AB69_RS02335;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AB69_RS02335;old_locus_tag=AB69_4323 NZ_JHDO01000123.1 Protein Homology CDS 101787 102866 . + 0 ID=cds-WP_001004446.1;Parent=gene-AB69_RS02335;Dbxref=GenBank:WP_001004446.1;Name=WP_001004446.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AB69_RS02335;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004446.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 102881 103201 . + . ID=gene-AB69_RS02330;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AB69_RS02330;old_locus_tag=AB69_4324 NZ_JHDO01000123.1 Protein Homology CDS 102881 103201 . + 0 ID=cds-WP_000161265.1;Parent=gene-AB69_RS02330;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AB69_RS02330;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 103252 105549 . + . ID=gene-AB69_RS02325;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AB69_RS02325;old_locus_tag=AB69_4325 NZ_JHDO01000123.1 Protein Homology CDS 103252 105549 . + 0 ID=cds-WP_000184811.1;Parent=gene-AB69_RS02325;Dbxref=GenBank:WP_000184811.1;Name=WP_000184811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AB69_RS02325;product=formate C-acetyltransferase;protein_id=WP_000184811.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 105515 106393 . + . ID=gene-AB69_RS02320;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AB69_RS02320;old_locus_tag=AB69_4326 NZ_JHDO01000123.1 Protein Homology CDS 105515 106393 . + 0 ID=cds-WP_000204105.1;Parent=gene-AB69_RS02320;Dbxref=GenBank:WP_000204105.1;Name=WP_000204105.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418387.3;locus_tag=AB69_RS02320;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204105.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 106395 106736 . + . ID=gene-AB69_RS02315;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AB69_RS02315;old_locus_tag=AB69_4327 NZ_JHDO01000123.1 Protein Homology CDS 106395 106736 . + 0 ID=cds-WP_000323846.1;Parent=gene-AB69_RS02315;Dbxref=GenBank:WP_000323846.1;Name=WP_000323846.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AB69_RS02315;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323846.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 106723 107574 . - . ID=gene-AB69_RS02310;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AB69_RS02310;old_locus_tag=AB69_4328 NZ_JHDO01000123.1 Protein Homology CDS 106723 107574 . - 0 ID=cds-WP_000274636.1;Parent=gene-AB69_RS02310;Dbxref=GenBank:WP_000274636.1;Name=WP_000274636.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=AB69_RS02310;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 107789 109522 . - . ID=gene-AB69_RS02305;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AB69_RS02305;old_locus_tag=AB69_4329 NZ_JHDO01000123.1 Protein Homology CDS 107789 109522 . - 0 ID=cds-WP_000556306.1;Parent=gene-AB69_RS02305;Dbxref=GenBank:WP_000556306.1;Name=WP_000556306.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AB69_RS02305;product=phosphoethanolamine transferase CptA;protein_id=WP_000556306.1;transl_table=11 NZ_JHDO01000123.1 RefSeq gene 109704 112355 . - . ID=gene-AB69_RS02300;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AB69_RS02300;old_locus_tag=AB69_4330 NZ_JHDO01000123.1 Protein Homology CDS 109704 112355 . - 0 ID=cds-WP_001005586.1;Parent=gene-AB69_RS02300;Dbxref=GenBank:WP_001005586.1;Name=WP_001005586.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB69_RS02300;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005586.1;transl_table=11 ##sequence-region NZ_JHDO01000124.1 1 14487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000124.1 RefSeq region 1 14487 . + . ID=NZ_JHDO01000124.1:1..14487;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000124.1 RefSeq gene 1 789 . - . ID=gene-AB69_RS02295;Name=AB69_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS02295;old_locus_tag=AB69_4331;partial=true;start_range=.,1 NZ_JHDO01000124.1 Protein Homology CDS 1 789 . - 0 ID=cds-WP_021554688.1-2;Parent=gene-AB69_RS02295;Dbxref=GenBank:WP_021554688.1;Name=WP_021554688.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB69_RS02295;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=WP_021554688.1;start_range=.,1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 1633 2784 . - . ID=gene-AB69_RS02290;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AB69_RS02290;old_locus_tag=AB69_4332 NZ_JHDO01000124.1 Protein Homology CDS 1633 2784 . - 0 ID=cds-WP_001298964.1;Parent=gene-AB69_RS02290;Dbxref=GenBank:WP_001298964.1;Name=WP_001298964.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AB69_RS02290;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 2938 3942 . + . ID=gene-AB69_RS02285;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AB69_RS02285;old_locus_tag=AB69_4333 NZ_JHDO01000124.1 Protein Homology CDS 2938 3942 . + 0 ID=cds-WP_000935370.1;Parent=gene-AB69_RS02285;Dbxref=GenBank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AB69_RS02285;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 3950 4726 . + . ID=gene-AB69_RS02280;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AB69_RS02280;old_locus_tag=AB69_4334 NZ_JHDO01000124.1 Protein Homology CDS 3950 4726 . + 0 ID=cds-WP_001302318.1;Parent=gene-AB69_RS02280;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AB69_RS02280;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 4787 6160 . + . ID=gene-AB69_RS02275;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AB69_RS02275;old_locus_tag=AB69_4335 NZ_JHDO01000124.1 Protein Homology CDS 4787 6160 . + 0 ID=cds-WP_001230087.1;Parent=gene-AB69_RS02275;Dbxref=GenBank:WP_001230087.1;Name=WP_001230087.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AB69_RS02275;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 6427 7344 . + . ID=gene-AB69_RS02270;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AB69_RS02270;old_locus_tag=AB69_4336 NZ_JHDO01000124.1 Protein Homology CDS 6427 7344 . + 0 ID=cds-WP_001025939.1;Parent=gene-AB69_RS02270;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AB69_RS02270;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 7327 8727 . - . ID=gene-AB69_RS02265;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AB69_RS02265;old_locus_tag=AB69_4337 NZ_JHDO01000124.1 Protein Homology CDS 7327 8727 . - 0 ID=cds-WP_001120810.1;Parent=gene-AB69_RS02265;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AB69_RS02265;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 9058 9708 . + . ID=gene-AB69_RS02260;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AB69_RS02260;old_locus_tag=AB69_4338 NZ_JHDO01000124.1 Protein Homology CDS 9058 9708 . + 0 ID=cds-WP_001309117.1;Parent=gene-AB69_RS02260;Dbxref=GenBank:WP_001309117.1;Name=WP_001309117.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AB69_RS02260;product=HTH-type transcriptional repressor FabR;protein_id=WP_001309117.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 9708 10067 . + . ID=gene-AB69_RS02255;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AB69_RS02255;old_locus_tag=AB69_4339 NZ_JHDO01000124.1 Protein Homology CDS 9708 10067 . + 0 ID=cds-WP_000806411.1;Parent=gene-AB69_RS02255;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AB69_RS02255;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 10107 11207 . - . ID=gene-AB69_RS02250;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AB69_RS02250;old_locus_tag=AB69_4340 NZ_JHDO01000124.1 Protein Homology CDS 10107 11207 . - 0 ID=cds-WP_000187022.1;Parent=gene-AB69_RS02250;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AB69_RS02250;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JHDO01000124.1 cmsearch riboswitch 11321 11510 . + . ID=id-NZ_JHDO01000124.1:11321..11510;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000124.1 RefSeq gene 11576 13420 . + . ID=gene-AB69_RS02245;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AB69_RS02245;old_locus_tag=AB69_4341 NZ_JHDO01000124.1 Protein Homology CDS 11576 13420 . + 0 ID=cds-WP_000591359.1;Parent=gene-AB69_RS02245;Dbxref=GenBank:WP_000591359.1;Name=WP_000591359.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AB69_RS02245;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591359.1;transl_table=11 NZ_JHDO01000124.1 RefSeq gene 13365 14222 . + . ID=gene-AB69_RS02240;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AB69_RS02240;old_locus_tag=AB69_4342 NZ_JHDO01000124.1 Protein Homology CDS 13365 14222 . + 0 ID=cds-WP_000201820.1;Parent=gene-AB69_RS02240;Dbxref=GenBank:WP_000201820.1;Name=WP_000201820.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418402.2;locus_tag=AB69_RS02240;product=glutamate racemase;protein_id=WP_000201820.1;transl_table=11 ##sequence-region NZ_JHDO01000125.1 1 42918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000125.1 RefSeq region 1 42918 . + . ID=NZ_JHDO01000125.1:1..42918;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000125.1 RefSeq gene 1 588 . + . ID=gene-AB69_RS02235;Name=AB69_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS02235;old_locus_tag=AB69_4343;partial=true;start_range=.,1 NZ_JHDO01000125.1 Protein Homology CDS 1 588 . + 0 ID=cds-WP_019842912.1;Parent=gene-AB69_RS02235;Dbxref=GenBank:WP_019842912.1;Name=WP_019842912.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB69_RS02235;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_019842912.1;start_range=.,1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 880 3573 . + . ID=gene-AB69_RS02230;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AB69_RS02230;old_locus_tag=AB69_4344 NZ_JHDO01000125.1 Protein Homology CDS 880 3573 . + 0 ID=cds-WP_000773156.1;Parent=gene-AB69_RS02230;Dbxref=GenBank:WP_000773156.1;Name=WP_000773156.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AB69_RS02230;product=bifunctional chitinase/lysozyme;protein_id=WP_000773156.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 3742 3936 . + . ID=gene-AB69_RS02225;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AB69_RS02225;old_locus_tag=AB69_4346 NZ_JHDO01000125.1 Protein Homology CDS 3742 3936 . + 0 ID=cds-WP_000289085.1;Parent=gene-AB69_RS02225;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AB69_RS02225;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 4008 4484 . + . ID=gene-AB69_RS02220;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AB69_RS02220;old_locus_tag=AB69_4347 NZ_JHDO01000125.1 Protein Homology CDS 4008 4484 . + 0 ID=cds-WP_000675504.1;Parent=gene-AB69_RS02220;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AB69_RS02220;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 4513 5190 . - . ID=gene-AB69_RS02215;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AB69_RS02215;old_locus_tag=AB69_4348 NZ_JHDO01000125.1 Protein Homology CDS 4513 5190 . - 0 ID=cds-WP_000178161.1;Parent=gene-AB69_RS02215;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AB69_RS02215;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 5190 5651 . - . ID=gene-AB69_RS02210;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AB69_RS02210;old_locus_tag=AB69_4349 NZ_JHDO01000125.1 Protein Homology CDS 5190 5651 . - 0 ID=cds-WP_001295161.1;Parent=gene-AB69_RS02210;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AB69_RS02210;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 5648 6811 . - . ID=gene-AB69_RS02205;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AB69_RS02205;old_locus_tag=AB69_4350 NZ_JHDO01000125.1 Protein Homology CDS 5648 6811 . - 0 ID=cds-WP_001115238.1;Parent=gene-AB69_RS02205;Dbxref=GenBank:WP_001115238.1;Name=WP_001115238.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AB69_RS02205;product=type II secretion system protein GspL;protein_id=WP_001115238.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 6826 7809 . - . ID=gene-AB69_RS02200;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AB69_RS02200;old_locus_tag=AB69_4351 NZ_JHDO01000125.1 Protein Homology CDS 6826 7809 . - 0 ID=cds-WP_032231493.1;Parent=gene-AB69_RS02200;Dbxref=GenBank:WP_032231493.1;Name=WP_032231493.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AB69_RS02200;product=type II secretion system minor pseudopilin GspK;protein_id=WP_032231493.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 7802 8389 . - . ID=gene-AB69_RS02195;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AB69_RS02195;old_locus_tag=AB69_4352 NZ_JHDO01000125.1 Protein Homology CDS 7802 8389 . - 0 ID=cds-WP_000610634.1;Parent=gene-AB69_RS02195;Dbxref=GenBank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AB69_RS02195;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 8382 8759 . - . ID=gene-AB69_RS02190;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AB69_RS02190;old_locus_tag=AB69_4353 NZ_JHDO01000125.1 Protein Homology CDS 8382 8759 . - 0 ID=cds-WP_001041743.1;Parent=gene-AB69_RS02190;Dbxref=GenBank:WP_001041743.1;Name=WP_001041743.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AB69_RS02190;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 8756 9265 . - . ID=gene-AB69_RS02185;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AB69_RS02185;old_locus_tag=AB69_4354 NZ_JHDO01000125.1 Protein Homology CDS 8756 9265 . - 0 ID=cds-WP_001076046.1;Parent=gene-AB69_RS02185;Dbxref=GenBank:WP_001076046.1;Name=WP_001076046.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AB69_RS02185;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001076046.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 9273 9710 . - . ID=gene-AB69_RS29000;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AB69_RS29000;old_locus_tag=AB69_4355 NZ_JHDO01000125.1 Protein Homology CDS 9273 9710 . - 0 ID=cds-WP_001202874.1;Parent=gene-AB69_RS29000;Dbxref=GenBank:WP_001202874.1;Name=WP_001202874.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AB69_RS29000;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202874.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 9720 10916 . - . ID=gene-AB69_RS02175;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AB69_RS02175;old_locus_tag=AB69_4356 NZ_JHDO01000125.1 Protein Homology CDS 9720 10916 . - 0 ID=cds-WP_001109573.1;Parent=gene-AB69_RS02175;Dbxref=GenBank:WP_001109573.1;Name=WP_001109573.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AB69_RS02175;product=type II secretion system inner membrane protein GspF;protein_id=WP_001109573.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 10913 12394 . - . ID=gene-AB69_RS02170;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB69_RS02170;old_locus_tag=AB69_4357 NZ_JHDO01000125.1 Protein Homology CDS 10913 12394 . - 0 ID=cds-WP_001219894.1;Parent=gene-AB69_RS02170;Dbxref=GenBank:WP_001219894.1;Name=WP_001219894.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AB69_RS02170;product=type II secretion system ATPase GspE;protein_id=WP_001219894.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 12404 14356 . - . ID=gene-AB69_RS02165;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AB69_RS02165;old_locus_tag=AB69_4358 NZ_JHDO01000125.1 Protein Homology CDS 12404 14356 . - 0 ID=cds-WP_001326512.1;Parent=gene-AB69_RS02165;Dbxref=GenBank:WP_001326512.1;Name=WP_001326512.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AB69_RS02165;product=type II secretion system secretin GspD;protein_id=WP_001326512.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 14340 15155 . - . ID=gene-AB69_RS02160;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AB69_RS02160;old_locus_tag=AB69_4359 NZ_JHDO01000125.1 Protein Homology CDS 14340 15155 . - 0 ID=cds-WP_001142708.1;Parent=gene-AB69_RS02160;Dbxref=GenBank:WP_001142708.1;Name=WP_001142708.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AB69_RS02160;product=type II secretion system protein GspC;protein_id=WP_001142708.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 15335 16804 . + . ID=gene-AB69_RS02155;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AB69_RS02155;old_locus_tag=AB69_4360 NZ_JHDO01000125.1 Protein Homology CDS 15335 16804 . + 0 ID=cds-WP_000107576.1;Parent=gene-AB69_RS02155;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AB69_RS02155;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 16806 17225 . + . ID=gene-AB69_RS02150;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AB69_RS02150;old_locus_tag=AB69_4361 NZ_JHDO01000125.1 Protein Homology CDS 16806 17225 . + 0 ID=cds-WP_000461450.1;Parent=gene-AB69_RS02150;Dbxref=GenBank:WP_000461450.1;Name=WP_000461450.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AB69_RS02150;product=putative general secretion pathway protein GspB;protein_id=WP_000461450.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 17463 17774 . + . ID=gene-AB69_RS02145;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AB69_RS02145;old_locus_tag=AB69_4362 NZ_JHDO01000125.1 Protein Homology CDS 17463 17774 . + 0 ID=cds-WP_001181004.1;Parent=gene-AB69_RS02145;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AB69_RS02145;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 17807 18436 . + . ID=gene-AB69_RS02140;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AB69_RS02140;old_locus_tag=AB69_4363 NZ_JHDO01000125.1 Protein Homology CDS 17807 18436 . + 0 ID=cds-WP_000579833.1;Parent=gene-AB69_RS02140;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AB69_RS02140;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 18447 19052 . + . ID=gene-AB69_RS02135;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AB69_RS02135;old_locus_tag=AB69_4364 NZ_JHDO01000125.1 Protein Homology CDS 18447 19052 . + 0 ID=cds-WP_000424395.1;Parent=gene-AB69_RS02135;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AB69_RS02135;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 19049 19351 . + . ID=gene-AB69_RS02130;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AB69_RS02130;old_locus_tag=AB69_4365 NZ_JHDO01000125.1 Protein Homology CDS 19049 19351 . + 0 ID=cds-WP_000617544.1;Parent=gene-AB69_RS02130;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AB69_RS02130;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 19369 20190 . + . ID=gene-AB69_RS02125;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AB69_RS02125;old_locus_tag=AB69_4366 NZ_JHDO01000125.1 Protein Homology CDS 19369 20190 . + 0 ID=cds-WP_000301864.1;Parent=gene-AB69_RS02125;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AB69_RS02125;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 20207 20485 . + . ID=gene-AB69_RS0125410;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AB69_RS0125410 NZ_JHDO01000125.1 Protein Homology CDS 20207 20485 . + 0 ID=cds-WP_001138117.1;Parent=gene-AB69_RS0125410;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AB69_RS0125410;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 20500 20832 . + . ID=gene-AB69_RS02120;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AB69_RS02120;old_locus_tag=AB69_4368 NZ_JHDO01000125.1 Protein Homology CDS 20500 20832 . + 0 ID=cds-WP_000447529.1;Parent=gene-AB69_RS02120;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AB69_RS02120;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 20850 21551 . + . ID=gene-AB69_RS02115;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AB69_RS02115;old_locus_tag=AB69_4369 NZ_JHDO01000125.1 Protein Homology CDS 20850 21551 . + 0 ID=cds-WP_000529945.1;Parent=gene-AB69_RS02115;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AB69_RS02115;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 21564 21974 . + . ID=gene-AB69_RS02110;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AB69_RS02110;old_locus_tag=AB69_4370 NZ_JHDO01000125.1 Protein Homology CDS 21564 21974 . + 0 ID=cds-WP_000941212.1;Parent=gene-AB69_RS02110;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AB69_RS02110;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 21974 22165 . + . ID=gene-AB69_RS02105;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AB69_RS02105;old_locus_tag=AB69_4371 NZ_JHDO01000125.1 Protein Homology CDS 21974 22165 . + 0 ID=cds-WP_000644741.1;Parent=gene-AB69_RS02105;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AB69_RS02105;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 22165 22419 . + . ID=gene-AB69_RS02100;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AB69_RS02100;old_locus_tag=AB69_4372 NZ_JHDO01000125.1 Protein Homology CDS 22165 22419 . + 0 ID=cds-WP_000130100.1;Parent=gene-AB69_RS02100;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AB69_RS02100;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 22584 22955 . + . ID=gene-AB69_RS02095;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AB69_RS02095;old_locus_tag=AB69_4373 NZ_JHDO01000125.1 Protein Homology CDS 22584 22955 . + 0 ID=cds-WP_000613955.1;Parent=gene-AB69_RS02095;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AB69_RS02095;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 22966 23280 . + . ID=gene-AB69_RS02090;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AB69_RS02090;old_locus_tag=AB69_4374 NZ_JHDO01000125.1 Protein Homology CDS 22966 23280 . + 0 ID=cds-WP_000729185.1;Parent=gene-AB69_RS02090;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AB69_RS02090;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 23295 23834 . + . ID=gene-AB69_RS02085;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AB69_RS02085;old_locus_tag=AB69_4375 NZ_JHDO01000125.1 Protein Homology CDS 23295 23834 . + 0 ID=cds-WP_001096200.1;Parent=gene-AB69_RS02085;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AB69_RS02085;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 23849 24154 . + . ID=gene-AB69_RS02080;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AB69_RS02080;old_locus_tag=AB69_4376 NZ_JHDO01000125.1 Protein Homology CDS 23849 24154 . + 0 ID=cds-WP_001118930.1;Parent=gene-AB69_RS02080;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AB69_RS02080;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 24188 24580 . + . ID=gene-AB69_RS02075;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AB69_RS02075;old_locus_tag=AB69_4377 NZ_JHDO01000125.1 Protein Homology CDS 24188 24580 . + 0 ID=cds-WP_000062611.1;Parent=gene-AB69_RS02075;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AB69_RS02075;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 24593 25126 . + . ID=gene-AB69_RS02070;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AB69_RS02070;old_locus_tag=AB69_4378 NZ_JHDO01000125.1 Protein Homology CDS 24593 25126 . + 0 ID=cds-WP_000091945.1;Parent=gene-AB69_RS02070;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AB69_RS02070;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 25136 25489 . + . ID=gene-AB69_RS02065;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AB69_RS02065;old_locus_tag=AB69_4379 NZ_JHDO01000125.1 Protein Homology CDS 25136 25489 . + 0 ID=cds-WP_000358960.1;Parent=gene-AB69_RS02065;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AB69_RS02065;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 25504 26007 . + . ID=gene-AB69_RS02060;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AB69_RS02060;old_locus_tag=AB69_4380 NZ_JHDO01000125.1 Protein Homology CDS 25504 26007 . + 0 ID=cds-WP_000940121.1;Parent=gene-AB69_RS02060;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AB69_RS02060;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 26011 26190 . + . ID=gene-AB69_RS02055;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AB69_RS02055;old_locus_tag=AB69_4381 NZ_JHDO01000125.1 Protein Homology CDS 26011 26190 . + 0 ID=cds-WP_001140433.1;Parent=gene-AB69_RS02055;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AB69_RS02055;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 26194 26628 . + . ID=gene-AB69_RS02050;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AB69_RS02050;old_locus_tag=AB69_4382 NZ_JHDO01000125.1 Protein Homology CDS 26194 26628 . + 0 ID=cds-WP_001238914.1;Parent=gene-AB69_RS02050;Dbxref=GenBank:WP_001238914.1;Name=WP_001238914.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AB69_RS02050;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 26636 27967 . + . ID=gene-AB69_RS02045;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AB69_RS02045;old_locus_tag=AB69_4383 NZ_JHDO01000125.1 Protein Homology CDS 26636 27967 . + 0 ID=cds-WP_001118861.1;Parent=gene-AB69_RS02045;Dbxref=GenBank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AB69_RS02045;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 27999 28115 . + . ID=gene-AB69_RS02040;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AB69_RS02040;old_locus_tag=AB69_4384 NZ_JHDO01000125.1 Protein Homology CDS 27999 28115 . + 0 ID=cds-WP_000868187.1;Parent=gene-AB69_RS02040;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AB69_RS02040;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 28262 28618 . + . ID=gene-AB69_RS02035;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AB69_RS02035;old_locus_tag=AB69_4385 NZ_JHDO01000125.1 Protein Homology CDS 28262 28618 . + 0 ID=cds-WP_000090775.1;Parent=gene-AB69_RS02035;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AB69_RS02035;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 28635 29024 . + . ID=gene-AB69_RS02030;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AB69_RS02030;old_locus_tag=AB69_4386 NZ_JHDO01000125.1 Protein Homology CDS 28635 29024 . + 0 ID=cds-WP_001029684.1;Parent=gene-AB69_RS02030;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AB69_RS02030;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 29058 29678 . + . ID=gene-AB69_RS02025;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AB69_RS02025;old_locus_tag=AB69_4387 NZ_JHDO01000125.1 Protein Homology CDS 29058 29678 . + 0 ID=cds-WP_000135224.1;Parent=gene-AB69_RS02025;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AB69_RS02025;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 29704 30693 . + . ID=gene-AB69_RS02020;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AB69_RS02020;old_locus_tag=AB69_4388 NZ_JHDO01000125.1 Protein Homology CDS 29704 30693 . + 0 ID=cds-WP_001162094.1;Parent=gene-AB69_RS02020;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AB69_RS02020;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 30734 31117 . + . ID=gene-AB69_RS02015;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AB69_RS02015;old_locus_tag=AB69_4389 NZ_JHDO01000125.1 Protein Homology CDS 30734 31117 . + 0 ID=cds-WP_001216368.1;Parent=gene-AB69_RS02015;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AB69_RS02015;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 31224 31592 . + . ID=gene-AB69_RS02010;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=AB69_RS02010;old_locus_tag=AB69_4390 NZ_JHDO01000125.1 Protein Homology CDS 31224 31592 . + 0 ID=cds-WP_000266486.1;Parent=gene-AB69_RS02010;Dbxref=GenBank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;gene=yhdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AB69_RS02010;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 31603 32028 . + . ID=gene-AB69_RS02005;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AB69_RS02005;old_locus_tag=AB69_4391 NZ_JHDO01000125.1 Protein Homology CDS 31603 32028 . + 0 ID=cds-WP_000285607.1;Parent=gene-AB69_RS02005;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AB69_RS02005;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 32084 32302 . + . ID=gene-AB69_RS0125415;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AB69_RS0125415 NZ_JHDO01000125.1 Protein Homology CDS 32084 32302 . + 0 ID=cds-WP_000092696.1;Parent=gene-AB69_RS0125415;Dbxref=GenBank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AB69_RS0125415;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 32299 32709 . - . ID=gene-AB69_RS02000;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AB69_RS02000;old_locus_tag=AB69_4392 NZ_JHDO01000125.1 Protein Homology CDS 32299 32709 . - 0 ID=cds-WP_000022442.1;Parent=gene-AB69_RS02000;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AB69_RS02000;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 32839 34215 . - . ID=gene-AB69_RS01995;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AB69_RS01995;old_locus_tag=AB69_4393 NZ_JHDO01000125.1 Protein Homology CDS 32839 34215 . - 0 ID=cds-WP_000691382.1;Parent=gene-AB69_RS01995;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AB69_RS01995;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 34237 35526 . - . ID=gene-AB69_RS01990;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AB69_RS01990;old_locus_tag=AB69_4394 NZ_JHDO01000125.1 Protein Homology CDS 34237 35526 . - 0 ID=cds-WP_000744778.1;Parent=gene-AB69_RS01990;Dbxref=GenBank:WP_000744778.1;Name=WP_000744778.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AB69_RS01990;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744778.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 35572 36519 . - . ID=gene-AB69_RS01985;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AB69_RS01985;old_locus_tag=AB69_4395 NZ_JHDO01000125.1 Protein Homology CDS 35572 36519 . - 0 ID=cds-WP_000004473.1;Parent=gene-AB69_RS01985;Dbxref=GenBank:WP_000004473.1;Name=WP_000004473.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AB69_RS01985;product=methionyl-tRNA formyltransferase;protein_id=WP_000004473.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 36534 37043 . - . ID=gene-AB69_RS01980;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AB69_RS01980;old_locus_tag=AB69_4396 NZ_JHDO01000125.1 Protein Homology CDS 36534 37043 . - 0 ID=cds-WP_000114984.1;Parent=gene-AB69_RS01980;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AB69_RS01980;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 37173 38297 . + . ID=gene-AB69_RS01975;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AB69_RS01975;old_locus_tag=AB69_4397 NZ_JHDO01000125.1 Protein Homology CDS 37173 38297 . + 0 ID=cds-WP_032231491.1;Parent=gene-AB69_RS01975;Dbxref=GenBank:WP_032231491.1;Name=WP_032231491.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AB69_RS01975;product=DNA-protecting protein DprA;protein_id=WP_032231491.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 38269 38742 . + . ID=gene-AB69_RS01970;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AB69_RS01970;old_locus_tag=AB69_4398 NZ_JHDO01000125.1 Protein Homology CDS 38269 38742 . + 0 ID=cds-WP_000460680.1;Parent=gene-AB69_RS01970;Dbxref=GenBank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AB69_RS01970;product=DUF494 family protein Smg;protein_id=WP_000460680.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 38771 39313 . + . ID=gene-AB69_RS0125420;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=AB69_RS0125420 NZ_JHDO01000125.1 Protein Homology CDS 38771 39313 . + 0 ID=cds-WP_001129722.1;Parent=gene-AB69_RS0125420;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;gene=yrdD;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AB69_RS0125420;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 39318 39890 . + . ID=gene-AB69_RS01965;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AB69_RS01965;old_locus_tag=AB69_4400 NZ_JHDO01000125.1 Protein Homology CDS 39318 39890 . + 0 ID=cds-WP_001301412.1;Parent=gene-AB69_RS01965;Dbxref=GenBank:WP_001301412.1;Name=WP_001301412.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AB69_RS01965;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301412.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 39895 40713 . + . ID=gene-AB69_RS01960;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AB69_RS01960;old_locus_tag=AB69_4401 NZ_JHDO01000125.1 Protein Homology CDS 39895 40713 . + 0 ID=cds-WP_000451243.1;Parent=gene-AB69_RS01960;Dbxref=GenBank:WP_000451243.1;Name=WP_000451243.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AB69_RS01960;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 40710 40967 . + . ID=gene-AB69_RS0125425;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=AB69_RS0125425;old_locus_tag=AB69_4402 NZ_JHDO01000125.1 Protein Homology CDS 40710 40967 . + 0 ID=cds-WP_001070563.1;Parent=gene-AB69_RS0125425;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;gene=yrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AB69_RS0125425;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 40943 41497 . - . ID=gene-AB69_RS01955;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=AB69_RS01955;old_locus_tag=AB69_4403 NZ_JHDO01000125.1 Protein Homology CDS 40943 41497 . - 0 ID=cds-WP_001286216.1;Parent=gene-AB69_RS01955;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yrdA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AB69_RS01955;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 41526 41750 . + . ID=gene-AB69_RS29890;Name=AB69_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29890 NZ_JHDO01000125.1 GeneMarkS-2+ CDS 41526 41750 . + 0 ID=cds-WP_154205229.1;Parent=gene-AB69_RS29890;Dbxref=GenBank:WP_154205229.1;Name=WP_154205229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29890;product=hypothetical protein;protein_id=WP_154205229.1;transl_table=11 NZ_JHDO01000125.1 RefSeq gene 41972 42918 . + . ID=gene-AB69_RS01950;Name=AB69_RS01950;end_range=42918,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS01950;old_locus_tag=AB69_4405;partial=true NZ_JHDO01000125.1 cmsearch rRNA 41972 42918 . + . ID=rna-AB69_RS01950;Parent=gene-AB69_RS01950;Dbxref=RFAM:RF00177;end_range=42918,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS01950;partial=true;product=16S ribosomal RNA NZ_JHDO01000125.1 cmsearch exon 41972 42918 . + . ID=exon-AB69_RS01950-1;Parent=rna-AB69_RS01950;Dbxref=RFAM:RF00177;end_range=42918,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS01950;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDO01000126.1 1 6778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000126.1 RefSeq region 1 6778 . + . ID=NZ_JHDO01000126.1:1..6778;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000126.1 RefSeq gene 1 1168 . + . ID=gene-AB69_RS0125430;Name=AB69_RS0125430;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB69_RS0125430;partial=true;start_range=.,1 NZ_JHDO01000126.1 cmsearch rRNA 1 1168 . + . ID=rna-AB69_RS0125430;Parent=gene-AB69_RS0125430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125430;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000126.1 cmsearch exon 1 1168 . + . ID=exon-AB69_RS0125430-1;Parent=rna-AB69_RS0125430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS0125430;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDO01000126.1 RefSeq gene 1263 1378 . + . ID=gene-AB69_RS01945;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB69_RS01945;old_locus_tag=AB69_4406 NZ_JHDO01000126.1 cmsearch rRNA 1263 1378 . + . ID=rna-AB69_RS01945;Parent=gene-AB69_RS01945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS01945;product=5S ribosomal RNA NZ_JHDO01000126.1 cmsearch exon 1263 1378 . + . ID=exon-AB69_RS01945-1;Parent=rna-AB69_RS01945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB69_RS01945;product=5S ribosomal RNA NZ_JHDO01000126.1 RefSeq gene 1455 1838 . + . ID=gene-AB69_RS01940;Name=AB69_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS01940;old_locus_tag=AB69_4407 NZ_JHDO01000126.1 Protein Homology CDS 1455 1838 . + 0 ID=cds-WP_001326558.1;Parent=gene-AB69_RS01940;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AB69_RS01940;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11 NZ_JHDO01000126.1 RefSeq gene 1901 2344 . - . ID=gene-AB69_RS01935;Name=AB69_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS01935;old_locus_tag=AB69_4408 NZ_JHDO01000126.1 Protein Homology CDS 1901 2344 . - 0 ID=cds-WP_000237004.1;Parent=gene-AB69_RS01935;Dbxref=GenBank:WP_000237004.1;Name=WP_000237004.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AB69_RS01935;product=acetyltransferase;protein_id=WP_000237004.1;transl_table=11 NZ_JHDO01000126.1 RefSeq gene 2501 3430 . + . ID=gene-AB69_RS01930;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AB69_RS01930;old_locus_tag=AB69_4409 NZ_JHDO01000126.1 Protein Homology CDS 2501 3430 . + 0 ID=cds-WP_001122777.1;Parent=gene-AB69_RS01930;Dbxref=GenBank:WP_001122777.1;Name=WP_001122777.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AB69_RS01930;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122777.1;transl_table=11 NZ_JHDO01000126.1 RefSeq gene 3699 5300 . + . ID=gene-AB69_RS01925;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AB69_RS01925;old_locus_tag=AB69_4410 NZ_JHDO01000126.1 Protein Homology CDS 3699 5300 . + 0 ID=cds-WP_001529540.1;Parent=gene-AB69_RS01925;Dbxref=GenBank:WP_001529540.1;Name=WP_001529540.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AB69_RS01925;product=malate synthase A;protein_id=WP_001529540.1;transl_table=11 NZ_JHDO01000126.1 RefSeq gene 5330 6634 . + . ID=gene-AB69_RS01920;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AB69_RS01920;old_locus_tag=AB69_4411 NZ_JHDO01000126.1 Protein Homology CDS 5330 6634 . + 0 ID=cds-WP_000857856.1;Parent=gene-AB69_RS01920;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB69_RS01920;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 ##sequence-region NZ_JHDO01000127.1 1 96165 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000127.1 RefSeq region 1 96165 . + . ID=NZ_JHDO01000127.1:1..96165;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000127.1 RefSeq pseudogene 1 353 . + . ID=gene-AB69_RS01915;Name=AB69_RS01915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS01915;old_locus_tag=AB69_4412;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000127.1 Protein Homology CDS 1 353 . + 2 ID=cds-AB69_RS01915;Parent=gene-AB69_RS01915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB69_RS01915;partial=true;product=isocitrate lyase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 634 2370 . + . ID=gene-AB69_RS01910;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AB69_RS01910;old_locus_tag=AB69_4413 NZ_JHDO01000127.1 Protein Homology CDS 634 2370 . + 0 ID=cds-WP_001137220.1;Parent=gene-AB69_RS01910;Dbxref=GenBank:WP_001137220.1;Name=WP_001137220.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB69_RS01910;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137220.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 2339 4525 . - . ID=gene-AB69_RS01905;Name=espL4;gbkey=Gene;gene=espL4;gene_biotype=protein_coding;locus_tag=AB69_RS01905;old_locus_tag=AB69_4414 NZ_JHDO01000127.1 Protein Homology CDS 2339 4525 . - 0 ID=cds-WP_032231597.1;Parent=gene-AB69_RS01905;Dbxref=GenBank:WP_032231597.1;Name=WP_032231597.1;gbkey=CDS;gene=espL4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AB69_RS01905;product=type III secretion system effector EspL4;protein_id=WP_032231597.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 4842 5666 . - . ID=gene-AB69_RS01900;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AB69_RS01900;old_locus_tag=AB69_4415 NZ_JHDO01000127.1 Protein Homology CDS 4842 5666 . - 0 ID=cds-WP_000226403.1;Parent=gene-AB69_RS01900;Dbxref=GenBank:WP_000226403.1;Name=WP_000226403.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AB69_RS01900;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226403.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 5866 9549 . + . ID=gene-AB69_RS01895;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AB69_RS01895;old_locus_tag=AB69_4416 NZ_JHDO01000127.1 Protein Homology CDS 5866 9549 . + 0 ID=cds-WP_000096011.1;Parent=gene-AB69_RS01895;Dbxref=GenBank:WP_000096011.1;Name=WP_000096011.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=AB69_RS01895;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 9769 11400 . + . ID=gene-AB69_RS01890;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AB69_RS01890;old_locus_tag=AB69_4417 NZ_JHDO01000127.1 Protein Homology CDS 9769 11400 . + 0 ID=cds-WP_000956830.1;Parent=gene-AB69_RS01890;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AB69_RS01890;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 11491 12180 . - . ID=gene-AB69_RS01885;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AB69_RS01885;old_locus_tag=AB69_4418 NZ_JHDO01000127.1 Protein Homology CDS 11491 12180 . - 0 ID=cds-WP_000421763.1;Parent=gene-AB69_RS01885;Dbxref=GenBank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AB69_RS01885;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 12392 13264 . + . ID=gene-AB69_RS01880;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AB69_RS01880;old_locus_tag=AB69_4419 NZ_JHDO01000127.1 Protein Homology CDS 12392 13264 . + 0 ID=cds-WP_000936377.1;Parent=gene-AB69_RS01880;Dbxref=GenBank:WP_000936377.1;Name=WP_000936377.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418446.1;locus_tag=AB69_RS01880;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936377.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 13397 13669 . - . ID=gene-AB69_RS01875;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AB69_RS01875;old_locus_tag=AB69_4420 NZ_JHDO01000127.1 Protein Homology CDS 13397 13669 . - 0 ID=cds-WP_001207634.1;Parent=gene-AB69_RS01875;Dbxref=GenBank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AB69_RS01875;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 13922 15271 . - . ID=gene-AB69_RS01870;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AB69_RS01870;old_locus_tag=AB69_4421 NZ_JHDO01000127.1 Protein Homology CDS 13922 15271 . - 0 ID=cds-WP_001290310.1;Parent=gene-AB69_RS01870;Dbxref=GenBank:WP_001290310.1;Name=WP_001290310.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418448.1;locus_tag=AB69_RS01870;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290310.1;transl_table=11 NZ_JHDO01000127.1 cmsearch riboswitch 15363 15559 . - . ID=id-NZ_JHDO01000127.1:15363..15559;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JHDO01000127.1 RefSeq gene 15796 17445 . + . ID=gene-AB69_RS01865;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AB69_RS01865;old_locus_tag=AB69_4422 NZ_JHDO01000127.1 Protein Homology CDS 15796 17445 . + 0 ID=cds-WP_000789986.1;Parent=gene-AB69_RS01865;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AB69_RS01865;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 17944 18186 . + . ID=gene-AB69_RS01860;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AB69_RS01860;old_locus_tag=AB69_4423 NZ_JHDO01000127.1 Protein Homology CDS 17944 18186 . + 0 ID=cds-WP_000757333.1;Parent=gene-AB69_RS01860;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AB69_RS01860;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 18300 18938 . + . ID=gene-AB69_RS01855;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AB69_RS01855;old_locus_tag=AB69_4424 NZ_JHDO01000127.1 Protein Homology CDS 18300 18938 . + 0 ID=cds-WP_001295278.1;Parent=gene-AB69_RS01855;Dbxref=GenBank:WP_001295278.1;Name=WP_001295278.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AB69_RS01855;product=YjbF family lipoprotein;protein_id=WP_001295278.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 18935 19672 . + . ID=gene-AB69_RS01850;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AB69_RS01850;old_locus_tag=AB69_4425 NZ_JHDO01000127.1 Protein Homology CDS 18935 19672 . + 0 ID=cds-WP_000595558.1;Parent=gene-AB69_RS01850;Dbxref=GenBank:WP_000595558.1;Name=WP_000595558.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AB69_RS01850;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595558.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 19672 21768 . + . ID=gene-AB69_RS01845;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AB69_RS01845;old_locus_tag=AB69_4426 NZ_JHDO01000127.1 Protein Homology CDS 19672 21768 . + 0 ID=cds-WP_032231598.1;Parent=gene-AB69_RS01845;Dbxref=GenBank:WP_032231598.1;Name=WP_032231598.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AB69_RS01845;product=YjbH domain-containing protein;protein_id=WP_032231598.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 21815 22093 . - . ID=gene-AB69_RS29010;Name=AB69_RS29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29010 NZ_JHDO01000127.1 Protein Homology CDS 21815 22093 . - 0 ID=cds-WP_001295279.1;Parent=gene-AB69_RS29010;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AB69_RS29010;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 22094 22237 . + . ID=gene-AB69_RS29895;Name=AB69_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29895;old_locus_tag=AB69_4428 NZ_JHDO01000127.1 GeneMarkS-2+ CDS 22094 22237 . + 0 ID=cds-WP_000487766.1;Parent=gene-AB69_RS29895;Dbxref=GenBank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS29895;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 22363 22773 . + . ID=gene-AB69_RS01835;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AB69_RS01835;old_locus_tag=AB69_4429 NZ_JHDO01000127.1 Protein Homology CDS 22363 22773 . + 0 ID=cds-WP_000202902.1;Parent=gene-AB69_RS01835;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AB69_RS01835;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 22817 24292 . - . ID=gene-AB69_RS01830;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AB69_RS01830;old_locus_tag=AB69_4430 NZ_JHDO01000127.1 Protein Homology CDS 22817 24292 . - 0 ID=cds-WP_001097274.1;Parent=gene-AB69_RS01830;Dbxref=GenBank:WP_001097274.1;Name=WP_001097274.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AB69_RS01830;product=D-xylose transporter XylE;protein_id=WP_001097274.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 24664 25554 . - . ID=gene-AB69_RS01825;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AB69_RS01825;old_locus_tag=AB69_4431 NZ_JHDO01000127.1 Protein Homology CDS 24664 25554 . - 0 ID=cds-WP_001252058.1;Parent=gene-AB69_RS01825;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AB69_RS01825;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 25569 27113 . - . ID=gene-AB69_RS01820;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AB69_RS01820;old_locus_tag=AB69_4432 NZ_JHDO01000127.1 Protein Homology CDS 25569 27113 . - 0 ID=cds-WP_001297290.1;Parent=gene-AB69_RS01820;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AB69_RS01820;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 27267 28457 . - . ID=gene-AB69_RS01815;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AB69_RS01815;old_locus_tag=AB69_4433 NZ_JHDO01000127.1 Protein Homology CDS 27267 28457 . - 0 ID=cds-WP_000695387.1;Parent=gene-AB69_RS01815;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AB69_RS01815;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 28822 29937 . + . ID=gene-AB69_RS01810;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AB69_RS01810;old_locus_tag=AB69_4434 NZ_JHDO01000127.1 Protein Homology CDS 28822 29937 . + 0 ID=cds-WP_000179165.1;Parent=gene-AB69_RS01810;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AB69_RS01810;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 30009 31349 . + . ID=gene-AB69_RS01805;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AB69_RS01805;old_locus_tag=AB69_4435 NZ_JHDO01000127.1 Protein Homology CDS 30009 31349 . + 0 ID=cds-WP_000973663.1;Parent=gene-AB69_RS01805;Dbxref=GenBank:WP_000973663.1;Name=WP_000973663.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418460.1;locus_tag=AB69_RS01805;product=maltoporin LamB;protein_id=WP_000973663.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 31592 32512 . + . ID=gene-AB69_RS01800;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AB69_RS01800;old_locus_tag=AB69_4436 NZ_JHDO01000127.1 Protein Homology CDS 31592 32512 . + 0 ID=cds-WP_001326641.1;Parent=gene-AB69_RS01800;Dbxref=GenBank:WP_001326641.1;Name=WP_001326641.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418461.1;locus_tag=AB69_RS01800;product=maltose operon protein MalM;protein_id=WP_001326641.1;transl_table=11 NZ_JHDO01000127.1 RefSeq pseudogene 32741 34321 . + . ID=gene-AB69_RS01795;Name=AB69_RS01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS01795;old_locus_tag=AB69_4439;pseudo=true NZ_JHDO01000127.1 Protein Homology CDS 32741 34321 . + 0 ID=cds-AB69_RS01795;Parent=gene-AB69_RS01795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=AB69_RS01795;product=SopA family protein;pseudo=true;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 34544 35041 . + . ID=gene-AB69_RS01790;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AB69_RS01790;old_locus_tag=AB69_4440 NZ_JHDO01000127.1 Protein Homology CDS 34544 35041 . + 0 ID=cds-WP_001326644.1;Parent=gene-AB69_RS01790;Dbxref=GenBank:WP_001326644.1;Name=WP_001326644.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418463.4;locus_tag=AB69_RS01790;product=chorismate lyase;protein_id=WP_001326644.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 35054 35926 . + . ID=gene-AB69_RS01785;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AB69_RS01785;old_locus_tag=AB69_4441 NZ_JHDO01000127.1 Protein Homology CDS 35054 35926 . + 0 ID=cds-WP_000455227.1;Parent=gene-AB69_RS01785;Dbxref=GenBank:WP_000455227.1;Name=WP_000455227.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AB69_RS01785;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 36081 38504 . - . ID=gene-AB69_RS01780;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AB69_RS01780;old_locus_tag=AB69_4442 NZ_JHDO01000127.1 Protein Homology CDS 36081 38504 . - 0 ID=cds-WP_000017354.1;Parent=gene-AB69_RS01780;Dbxref=GenBank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AB69_RS01780;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 38675 39043 . + . ID=gene-AB69_RS01775;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AB69_RS01775;old_locus_tag=AB69_4443 NZ_JHDO01000127.1 Protein Homology CDS 38675 39043 . + 0 ID=cds-WP_000002907.1;Parent=gene-AB69_RS01775;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AB69_RS01775;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 39153 39761 . + . ID=gene-AB69_RS01770;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AB69_RS01770;old_locus_tag=AB69_4444 NZ_JHDO01000127.1 Protein Homology CDS 39153 39761 . + 0 ID=cds-WP_000646078.1;Parent=gene-AB69_RS01770;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AB69_RS01770;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 39834 41159 . + . ID=gene-AB69_RS01765;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AB69_RS01765;old_locus_tag=AB69_4445 NZ_JHDO01000127.1 Protein Homology CDS 39834 41159 . + 0 ID=cds-WP_001326646.1;Parent=gene-AB69_RS01765;Dbxref=GenBank:WP_001326646.1;Name=WP_001326646.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AB69_RS01765;product=MATE family efflux transporter DinF;protein_id=WP_001326646.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 41275 41484 . + . ID=gene-AB69_RS01760;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AB69_RS01760;old_locus_tag=AB69_4446 NZ_JHDO01000127.1 Protein Homology CDS 41275 41484 . + 0 ID=cds-WP_001030593.1;Parent=gene-AB69_RS01760;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AB69_RS01760;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 41526 42041 . - . ID=gene-AB69_RS01755;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AB69_RS01755;old_locus_tag=AB69_4447 NZ_JHDO01000127.1 Protein Homology CDS 41526 42041 . - 0 ID=cds-WP_001295691.1;Parent=gene-AB69_RS01755;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AB69_RS01755;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JHDO01000127.1 RefSeq pseudogene 42359 43344 . + . ID=gene-AB69_RS01745;Name=AB69_RS01745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS01745;old_locus_tag=AB69_4449;pseudo=true NZ_JHDO01000127.1 Protein Homology CDS 42359 43344 . + 0 ID=cds-AB69_RS01745;Parent=gene-AB69_RS01745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AB69_RS01745;product=DUF2713 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 43707 44744 . + . ID=gene-AB69_RS01740;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AB69_RS01740;old_locus_tag=AB69_4451 NZ_JHDO01000127.1 Protein Homology CDS 43707 44744 . + 0 ID=cds-WP_001298868.1;Parent=gene-AB69_RS01740;Dbxref=GenBank:WP_001298868.1;Name=WP_001298868.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AB69_RS01740;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001298868.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 44878 45120 . + . ID=gene-AB69_RS01735;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AB69_RS01735;old_locus_tag=AB69_4452 NZ_JHDO01000127.1 Protein Homology CDS 44878 45120 . + 0 ID=cds-WP_000891404.1;Parent=gene-AB69_RS01735;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AB69_RS01735;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 45286 46269 . - . ID=gene-AB69_RS01730;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AB69_RS01730;old_locus_tag=AB69_4453 NZ_JHDO01000127.1 Protein Homology CDS 45286 46269 . - 0 ID=cds-WP_000235508.1;Parent=gene-AB69_RS01730;Dbxref=GenBank:WP_000235508.1;Name=WP_000235508.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418475.1;locus_tag=AB69_RS01730;product=quinone oxidoreductase;protein_id=WP_000235508.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 46352 47767 . + . ID=gene-AB69_RS01725;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AB69_RS01725;old_locus_tag=AB69_4454 NZ_JHDO01000127.1 Protein Homology CDS 46352 47767 . + 0 ID=cds-WP_000918363.1;Parent=gene-AB69_RS01725;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AB69_RS01725;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 47820 48899 . + . ID=gene-AB69_RS01720;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AB69_RS01720;old_locus_tag=AB69_4455 NZ_JHDO01000127.1 Protein Homology CDS 47820 48899 . + 0 ID=cds-WP_001147328.1;Parent=gene-AB69_RS01720;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AB69_RS01720;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 49152 50345 . + . ID=gene-AB69_RS01715;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AB69_RS01715;old_locus_tag=AB69_4457 NZ_JHDO01000127.1 Protein Homology CDS 49152 50345 . + 0 ID=cds-WP_000486985.1;Parent=gene-AB69_RS01715;Dbxref=GenBank:WP_000486985.1;Name=WP_000486985.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AB69_RS01715;product=aromatic amino acid transaminase;protein_id=WP_000486985.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 50847 51050 . - . ID=gene-AB69_RS30055;Name=yjbS;gbkey=Gene;gene=yjbS;gene_biotype=protein_coding;locus_tag=AB69_RS30055;old_locus_tag=AB69_4458 NZ_JHDO01000127.1 Protein Homology CDS 50847 51050 . - 0 ID=cds-WP_001321562.1;Parent=gene-AB69_RS30055;Dbxref=GenBank:WP_001321562.1;Name=WP_001321562.1;gbkey=CDS;gene=yjbS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AB69_RS30055;product=protein YjbS;protein_id=WP_001321562.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 51452 52165 . + . ID=gene-AB69_RS01710;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AB69_RS01710;old_locus_tag=AB69_4459 NZ_JHDO01000127.1 Protein Homology CDS 51452 52165 . + 0 ID=cds-WP_001226928.1;Parent=gene-AB69_RS01710;Dbxref=GenBank:WP_001226928.1;Name=WP_001226928.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AB69_RS01710;product=acid phosphatase AphA;protein_id=WP_001226928.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 52276 52692 . + . ID=gene-AB69_RS01705;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AB69_RS01705;old_locus_tag=AB69_4460 NZ_JHDO01000127.1 Protein Homology CDS 52276 52692 . + 0 ID=cds-WP_000270375.1;Parent=gene-AB69_RS01705;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AB69_RS01705;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 52696 53052 . + . ID=gene-AB69_RS01700;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AB69_RS01700;old_locus_tag=AB69_4461 NZ_JHDO01000127.1 Protein Homology CDS 52696 53052 . + 0 ID=cds-WP_000155657.1;Parent=gene-AB69_RS01700;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AB69_RS01700;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 53087 55909 . - . ID=gene-AB69_RS01695;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AB69_RS01695;old_locus_tag=AB69_4462 NZ_JHDO01000127.1 Protein Homology CDS 53087 55909 . - 0 ID=cds-WP_000357740.1;Parent=gene-AB69_RS01695;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AB69_RS01695;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 56163 56699 . + . ID=gene-AB69_RS01690;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AB69_RS01690;old_locus_tag=AB69_4463 NZ_JHDO01000127.1 Protein Homology CDS 56163 56699 . + 0 ID=cds-WP_000168305.1;Parent=gene-AB69_RS01690;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AB69_RS01690;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 56798 57079 . - . ID=gene-AB69_RS01685;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AB69_RS01685;old_locus_tag=AB69_4464 NZ_JHDO01000127.1 Protein Homology CDS 56798 57079 . - 0 ID=cds-WP_001295689.1;Parent=gene-AB69_RS01685;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AB69_RS01685;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 57509 59095 . + . ID=gene-AB69_RS01680;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AB69_RS01680;old_locus_tag=AB69_4465 NZ_JHDO01000127.1 Protein Homology CDS 57509 59095 . + 0 ID=cds-WP_000019548.1;Parent=gene-AB69_RS01680;Dbxref=GenBank:WP_000019548.1;Name=WP_000019548.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AB69_RS01680;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019548.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 59098 59421 . - . ID=gene-AB69_RS01675;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AB69_RS01675;old_locus_tag=AB69_4466 NZ_JHDO01000127.1 Protein Homology CDS 59098 59421 . - 0 ID=cds-WP_000019358.1;Parent=gene-AB69_RS01675;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AB69_RS01675;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 59507 59971 . + . ID=gene-AB69_RS01670;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AB69_RS01670;old_locus_tag=AB69_4467 NZ_JHDO01000127.1 Protein Homology CDS 59507 59971 . + 0 ID=cds-WP_000412428.1;Parent=gene-AB69_RS01670;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AB69_RS01670;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 60517 61866 . + . ID=gene-AB69_RS01665;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AB69_RS01665;old_locus_tag=AB69_4469 NZ_JHDO01000127.1 Protein Homology CDS 60517 61866 . + 0 ID=cds-WP_000106882.1;Parent=gene-AB69_RS01665;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AB69_RS01665;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 62017 63666 . + . ID=gene-AB69_RS01660;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AB69_RS01660;old_locus_tag=AB69_4470 NZ_JHDO01000127.1 Protein Homology CDS 62017 63666 . + 0 ID=cds-WP_000402207.1;Parent=gene-AB69_RS01660;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AB69_RS01660;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 63820 65112 . - . ID=gene-AB69_RS01655;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AB69_RS01655;old_locus_tag=AB69_4471 NZ_JHDO01000127.1 Protein Homology CDS 63820 65112 . - 0 ID=cds-WP_001270094.1;Parent=gene-AB69_RS01655;Dbxref=GenBank:WP_001270094.1;Name=WP_001270094.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AB69_RS01655;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_001270094.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 65290 66939 . - . ID=gene-AB69_RS01650;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AB69_RS01650;old_locus_tag=AB69_4472 NZ_JHDO01000127.1 Protein Homology CDS 65290 66939 . - 0 ID=cds-WP_000832573.1;Parent=gene-AB69_RS01650;Dbxref=GenBank:WP_000832573.1;Name=WP_000832573.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AB69_RS01650;product=cation/acetate symporter ActP;protein_id=WP_000832573.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 66936 67250 . - . ID=gene-AB69_RS01645;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AB69_RS01645;old_locus_tag=AB69_4473 NZ_JHDO01000127.1 Protein Homology CDS 66936 67250 . - 0 ID=cds-WP_001014565.1;Parent=gene-AB69_RS01645;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AB69_RS01645;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 67450 69408 . - . ID=gene-AB69_RS01640;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AB69_RS01640;old_locus_tag=AB69_4474 NZ_JHDO01000127.1 Protein Homology CDS 67450 69408 . - 0 ID=cds-WP_000078239.1;Parent=gene-AB69_RS01640;Dbxref=GenBank:WP_000078239.1;Name=WP_000078239.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AB69_RS01640;product=acetate--CoA ligase;protein_id=WP_000078239.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 69801 71237 . + . ID=gene-AB69_RS01635;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AB69_RS01635;old_locus_tag=AB69_4475 NZ_JHDO01000127.1 Protein Homology CDS 69801 71237 . + 0 ID=cds-WP_000196875.1;Parent=gene-AB69_RS01635;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AB69_RS01635;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 71282 71848 . + . ID=gene-AB69_RS01630;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AB69_RS01630;old_locus_tag=AB69_4476 NZ_JHDO01000127.1 Protein Homology CDS 71282 71848 . + 0 ID=cds-WP_001295391.1;Parent=gene-AB69_RS01630;Dbxref=GenBank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AB69_RS01630;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 71845 72516 . + . ID=gene-AB69_RS01625;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AB69_RS01625;old_locus_tag=AB69_4477 NZ_JHDO01000127.1 Protein Homology CDS 71845 72516 . + 0 ID=cds-WP_000220281.1;Parent=gene-AB69_RS01625;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AB69_RS01625;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 72513 73469 . + . ID=gene-AB69_RS01620;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AB69_RS01620;old_locus_tag=AB69_4478 NZ_JHDO01000127.1 Protein Homology CDS 72513 73469 . + 0 ID=cds-WP_000195171.1;Parent=gene-AB69_RS01620;Dbxref=GenBank:WP_000195171.1;Name=WP_000195171.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AB69_RS01620;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195171.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 73489 75207 . + . ID=gene-AB69_RS01615;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AB69_RS01615;old_locus_tag=AB69_4479 NZ_JHDO01000127.1 Protein Homology CDS 73489 75207 . + 0 ID=cds-WP_071597643.1;Parent=gene-AB69_RS01615;Dbxref=GenBank:WP_071597643.1;Name=WP_071597643.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AB69_RS01615;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071597643.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 75200 75583 . + . ID=gene-AB69_RS01610;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AB69_RS01610;old_locus_tag=AB69_4480 NZ_JHDO01000127.1 Protein Homology CDS 75200 75583 . + 0 ID=cds-WP_001032531.1;Parent=gene-AB69_RS01610;Dbxref=GenBank:WP_001032531.1;Name=WP_001032531.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AB69_RS01610;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032531.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 75580 76176 . + . ID=gene-AB69_RS01605;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AB69_RS01605;old_locus_tag=AB69_4481 NZ_JHDO01000127.1 Protein Homology CDS 75580 76176 . + 0 ID=cds-WP_000812896.1;Parent=gene-AB69_RS01605;Dbxref=GenBank:WP_000812896.1;Name=WP_000812896.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418500.1;locus_tag=AB69_RS01605;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812896.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 76518 77831 . + . ID=gene-AB69_RS01600;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AB69_RS01600;old_locus_tag=AB69_4483 NZ_JHDO01000127.1 Protein Homology CDS 76518 77831 . + 0 ID=cds-WP_000789589.1;Parent=gene-AB69_RS01600;Dbxref=GenBank:WP_000789589.1;Name=WP_000789589.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AB69_RS01600;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000789589.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 78136 78825 . - . ID=gene-AB69_RS01595;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AB69_RS01595;old_locus_tag=AB69_4484 NZ_JHDO01000127.1 Protein Homology CDS 78136 78825 . - 0 ID=cds-WP_000719886.1;Parent=gene-AB69_RS01595;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AB69_RS01595;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 78919 81066 . - . ID=gene-AB69_RS01590;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AB69_RS01590;old_locus_tag=AB69_4485 NZ_JHDO01000127.1 Protein Homology CDS 78919 81066 . - 0 ID=cds-WP_001300547.1;Parent=gene-AB69_RS01590;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AB69_RS01590;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(80647..80649)%2Caa:Sec);transl_table=11 NZ_JHDO01000127.1 RefSeq gene 81264 82730 . - . ID=gene-AB69_RS01580;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AB69_RS01580;old_locus_tag=AB69_4488 NZ_JHDO01000127.1 Protein Homology CDS 81264 82730 . - 0 ID=cds-WP_000610601.1;Parent=gene-AB69_RS01580;Dbxref=GenBank:WP_000610601.1;Name=WP_000610601.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418504.1;locus_tag=AB69_RS01580;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610601.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 82727 84778 . - . ID=gene-AB69_RS01575;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AB69_RS01575;old_locus_tag=AB69_4489 NZ_JHDO01000127.1 Protein Homology CDS 82727 84778 . - 0 ID=cds-WP_001275207.1;Parent=gene-AB69_RS01575;Dbxref=GenBank:WP_001275207.1;Name=WP_001275207.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AB69_RS01575;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_001275207.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 84778 85809 . - . ID=gene-AB69_RS01570;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AB69_RS01570;old_locus_tag=AB69_4490 NZ_JHDO01000127.1 Protein Homology CDS 84778 85809 . - 0 ID=cds-WP_000446378.1;Parent=gene-AB69_RS01570;Dbxref=GenBank:WP_000446378.1;Name=WP_000446378.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AB69_RS01570;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446378.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 85828 86103 . - . ID=gene-AB69_RS01565;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AB69_RS01565;old_locus_tag=AB69_4491 NZ_JHDO01000127.1 Protein Homology CDS 85828 86103 . - 0 ID=cds-WP_001295389.1;Parent=gene-AB69_RS01565;Dbxref=GenBank:WP_001295389.1;Name=WP_001295389.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AB69_RS01565;product=YtcA family lipoprotein;protein_id=WP_001295389.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 86312 88297 . - . ID=gene-AB69_RS01560;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AB69_RS01560;old_locus_tag=AB69_4493 NZ_JHDO01000127.1 Protein Homology CDS 86312 88297 . - 0 ID=cds-WP_001066019.1;Parent=gene-AB69_RS01560;Dbxref=GenBank:WP_001066019.1;Name=WP_001066019.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AB69_RS01560;product=alkyl sulfatase YjcS;protein_id=WP_001066019.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 88570 89499 . - . ID=gene-AB69_RS01555;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=AB69_RS01555;old_locus_tag=AB69_4494 NZ_JHDO01000127.1 Protein Homology CDS 88570 89499 . - 0 ID=cds-WP_032231600.1;Parent=gene-AB69_RS01555;Dbxref=GenBank:WP_032231600.1;Name=WP_032231600.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AB69_RS01555;product=allose kinase;protein_id=WP_032231600.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 89483 90178 . - . ID=gene-AB69_RS01550;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=AB69_RS01550;old_locus_tag=AB69_4495 NZ_JHDO01000127.1 Protein Homology CDS 89483 90178 . - 0 ID=cds-WP_001311314.1;Parent=gene-AB69_RS01550;Dbxref=GenBank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AB69_RS01550;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 90189 91169 . - . ID=gene-AB69_RS01545;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AB69_RS01545;old_locus_tag=AB69_4496 NZ_JHDO01000127.1 Protein Homology CDS 90189 91169 . - 0 ID=cds-WP_000507106.1;Parent=gene-AB69_RS01545;Dbxref=GenBank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AB69_RS01545;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 91148 92680 . - . ID=gene-AB69_RS01540;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=AB69_RS01540;old_locus_tag=AB69_4497 NZ_JHDO01000127.1 Protein Homology CDS 91148 92680 . - 0 ID=cds-WP_000235257.1;Parent=gene-AB69_RS01540;Dbxref=GenBank:WP_000235257.1;Name=WP_000235257.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AB69_RS01540;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_000235257.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 92807 93742 . - . ID=gene-AB69_RS01535;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AB69_RS01535;old_locus_tag=AB69_4498 NZ_JHDO01000127.1 Protein Homology CDS 92807 93742 . - 0 ID=cds-WP_001046187.1;Parent=gene-AB69_RS01535;Dbxref=GenBank:WP_001046187.1;Name=WP_001046187.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AB69_RS01535;product=D-allose transporter substrate-binding protein;protein_id=WP_001046187.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 93801 94691 . - . ID=gene-AB69_RS01530;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AB69_RS01530;old_locus_tag=AB69_4499 NZ_JHDO01000127.1 Protein Homology CDS 93801 94691 . - 0 ID=cds-WP_000083216.1;Parent=gene-AB69_RS01530;Dbxref=GenBank:WP_000083216.1;Name=WP_000083216.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AB69_RS01530;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000083216.1;transl_table=11 NZ_JHDO01000127.1 RefSeq gene 95050 95499 . + . ID=gene-AB69_RS01525;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AB69_RS01525;old_locus_tag=AB69_4500 NZ_JHDO01000127.1 Protein Homology CDS 95050 95499 . + 0 ID=cds-WP_000716794.1;Parent=gene-AB69_RS01525;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AB69_RS01525;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JHDO01000127.1 RefSeq pseudogene 95613 96165 . + . ID=gene-AB69_RS29030;Name=AB69_RS29030;end_range=96165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS29030;partial=true;pseudo=true NZ_JHDO01000127.1 Protein Homology CDS 95613 96165 . + 0 ID=cds-AB69_RS29030;Parent=gene-AB69_RS29030;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=96165,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS29030;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDO01000128.1 1 188597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000128.1 RefSeq region 1 188597 . + . ID=NZ_JHDO01000128.1:1..188597;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000128.1 RefSeq gene 48 745 . + . ID=gene-AB69_RS28050;Name=AB69_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28050;old_locus_tag=AB69_4502 NZ_JHDO01000128.1 Protein Homology CDS 48 297 . + 0 ID=cds-WP_094096600.1-15;Parent=gene-AB69_RS28050;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28050;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000128.1 Protein Homology CDS 297 745 . + 2 ID=cds-WP_094096600.1-15;Parent=gene-AB69_RS28050;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB69_RS28050;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 780 1109 . + . ID=gene-AB69_RS01515;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AB69_RS01515;old_locus_tag=AB69_4503 NZ_JHDO01000128.1 Protein Homology CDS 780 1109 . + 0 ID=cds-WP_000819746.1;Parent=gene-AB69_RS01515;Dbxref=GenBank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AB69_RS01515;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 1256 2014 . - . ID=gene-AB69_RS01510;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AB69_RS01510;old_locus_tag=AB69_4504 NZ_JHDO01000128.1 Protein Homology CDS 1256 2014 . - 0 ID=cds-WP_000059908.1;Parent=gene-AB69_RS01510;Dbxref=GenBank:WP_000059908.1;Name=WP_000059908.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AB69_RS01510;product=phosphonate metabolism protein PhnP;protein_id=WP_000059908.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 2016 2450 . - . ID=gene-AB69_RS01505;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AB69_RS01505;old_locus_tag=AB69_4505 NZ_JHDO01000128.1 Protein Homology CDS 2016 2450 . - 0 ID=cds-WP_032230929.1;Parent=gene-AB69_RS01505;Dbxref=GenBank:WP_032230929.1;Name=WP_032230929.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AB69_RS01505;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_032230929.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 2437 2994 . - . ID=gene-AB69_RS01500;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AB69_RS01500;old_locus_tag=AB69_4506 NZ_JHDO01000128.1 Protein Homology CDS 2437 2994 . - 0 ID=cds-WP_000971886.1;Parent=gene-AB69_RS01500;Dbxref=GenBank:WP_000971886.1;Name=WP_000971886.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=AB69_RS01500;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971886.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 2994 4130 . - . ID=gene-AB69_RS01495;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AB69_RS01495;old_locus_tag=AB69_4507 NZ_JHDO01000128.1 Protein Homology CDS 2994 4130 . - 0 ID=cds-WP_000586325.1;Parent=gene-AB69_RS01495;Dbxref=GenBank:WP_000586325.1;Name=WP_000586325.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418519.1;locus_tag=AB69_RS01495;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586325.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 4127 4807 . - . ID=gene-AB69_RS01490;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AB69_RS01490;old_locus_tag=AB69_4508 NZ_JHDO01000128.1 Protein Homology CDS 4127 4807 . - 0 ID=cds-WP_032230931.1;Parent=gene-AB69_RS01490;Dbxref=GenBank:WP_032230931.1;Name=WP_032230931.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418520.1;locus_tag=AB69_RS01490;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_032230931.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 4918 5676 . - . ID=gene-AB69_RS01485;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AB69_RS01485;old_locus_tag=AB69_4509 NZ_JHDO01000128.1 Protein Homology CDS 4918 5676 . - 0 ID=cds-WP_001075514.1;Parent=gene-AB69_RS01485;Dbxref=GenBank:WP_001075514.1;Name=WP_001075514.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=AB69_RS01485;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075514.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 5673 6518 . - . ID=gene-AB69_RS01480;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AB69_RS01480;old_locus_tag=AB69_4510 NZ_JHDO01000128.1 Protein Homology CDS 5673 6518 . - 0 ID=cds-WP_000002303.1;Parent=gene-AB69_RS01480;Dbxref=GenBank:WP_000002303.1;Name=WP_000002303.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AB69_RS01480;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002303.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 6511 7575 . - . ID=gene-AB69_RS01475;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AB69_RS01475;old_locus_tag=AB69_4511 NZ_JHDO01000128.1 Protein Homology CDS 6511 7575 . - 0 ID=cds-WP_001295388.1;Parent=gene-AB69_RS01475;Dbxref=GenBank:WP_001295388.1;Name=WP_001295388.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AB69_RS01475;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001295388.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 7575 8159 . - . ID=gene-AB69_RS01470;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AB69_RS01470;old_locus_tag=AB69_4512 NZ_JHDO01000128.1 Protein Homology CDS 7575 8159 . - 0 ID=cds-WP_000171628.1;Parent=gene-AB69_RS01470;Dbxref=GenBank:WP_000171628.1;Name=WP_000171628.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418524.1;locus_tag=AB69_RS01470;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171628.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 8156 8608 . - . ID=gene-AB69_RS01465;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AB69_RS01465;old_locus_tag=AB69_4513 NZ_JHDO01000128.1 Protein Homology CDS 8156 8608 . - 0 ID=cds-WP_000542790.1;Parent=gene-AB69_RS01465;Dbxref=GenBank:WP_000542790.1;Name=WP_000542790.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AB69_RS01465;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542790.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 8609 9334 . - . ID=gene-AB69_RS01460;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AB69_RS01460;old_locus_tag=AB69_4514 NZ_JHDO01000128.1 Protein Homology CDS 8609 9334 . - 0 ID=cds-WP_001295387.1;Parent=gene-AB69_RS01460;Dbxref=GenBank:WP_001295387.1;Name=WP_001295387.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AB69_RS01460;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001295387.1;transl_table=11 NZ_JHDO01000128.1 RefSeq pseudogene 9355 10142 . - . ID=gene-AB69_RS0125470;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=pseudogene;locus_tag=AB69_RS0125470;old_locus_tag=AB69_4516;pseudo=true NZ_JHDO01000128.1 Protein Homology CDS 9355 10142 . - 0 ID=cds-AB69_RS0125470;Parent=gene-AB69_RS0125470;Note=frameshifted;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AB69_RS0125470;product=phosphonate ABC transporter%2C permease protein PhnE;pseudo=true;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 10248 11264 . - . ID=gene-AB69_RS01455;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AB69_RS01455;old_locus_tag=AB69_4517 NZ_JHDO01000128.1 Protein Homology CDS 10248 11264 . - 0 ID=cds-WP_000992002.1;Parent=gene-AB69_RS01455;Dbxref=GenBank:WP_000992002.1;Name=WP_000992002.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AB69_RS01455;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000992002.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 11289 12077 . - . ID=gene-AB69_RS01450;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AB69_RS01450;old_locus_tag=AB69_4518 NZ_JHDO01000128.1 Protein Homology CDS 11289 12077 . - 0 ID=cds-WP_001193409.1;Parent=gene-AB69_RS01450;Dbxref=GenBank:WP_001193409.1;Name=WP_001193409.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418530.1;locus_tag=AB69_RS01450;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193409.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 12210 12653 . - . ID=gene-AB69_RS01445;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AB69_RS01445;old_locus_tag=AB69_4519 NZ_JHDO01000128.1 Protein Homology CDS 12210 12653 . - 0 ID=cds-WP_001131339.1;Parent=gene-AB69_RS01445;Dbxref=GenBank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AB69_RS01445;product=VOC family metalloprotein YjdN;protein_id=WP_001131339.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 13111 13446 . - . ID=gene-AB69_RS01440;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AB69_RS01440;old_locus_tag=AB69_4520 NZ_JHDO01000128.1 Protein Homology CDS 13111 13446 . - 0 ID=cds-WP_001300891.1;Parent=gene-AB69_RS01440;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AB69_RS01440;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 13847 16075 . + . ID=gene-AB69_RS01435;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AB69_RS01435;old_locus_tag=AB69_4521 NZ_JHDO01000128.1 Protein Homology CDS 13847 16075 . + 0 ID=cds-WP_000288603.1;Parent=gene-AB69_RS01435;Dbxref=GenBank:WP_000288603.1;Name=WP_000288603.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AB69_RS01435;product=clamp-binding protein CrfC;protein_id=WP_000288603.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 16072 16950 . + . ID=gene-AB69_RS01430;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AB69_RS01430;old_locus_tag=AB69_4522 NZ_JHDO01000128.1 Protein Homology CDS 16072 16950 . + 0 ID=cds-WP_000169188.1;Parent=gene-AB69_RS01430;Dbxref=GenBank:WP_000169188.1;Name=WP_000169188.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AB69_RS01430;product=YjcZ-like family protein;protein_id=WP_000169188.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 17214 18716 . + . ID=gene-AB69_RS01425;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AB69_RS01425;old_locus_tag=AB69_4523 NZ_JHDO01000128.1 Protein Homology CDS 17214 18716 . + 0 ID=cds-WP_001298520.1;Parent=gene-AB69_RS01425;Dbxref=GenBank:WP_001298520.1;Name=WP_001298520.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AB69_RS01425;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001298520.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 18828 18917 . + . ID=gene-AB69_RS0125475;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AB69_RS0125475 NZ_JHDO01000128.1 Protein Homology CDS 18828 18917 . + 0 ID=cds-WP_000797657.1;Parent=gene-AB69_RS0125475;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AB69_RS0125475;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 18893 19993 . - . ID=gene-AB69_RS01420;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AB69_RS01420;old_locus_tag=AB69_4524 NZ_JHDO01000128.1 Protein Homology CDS 18893 19993 . - 0 ID=cds-WP_001051092.1;Parent=gene-AB69_RS01420;Dbxref=GenBank:WP_001051092.1;Name=WP_001051092.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AB69_RS01420;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051092.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 19994 20662 . - . ID=gene-AB69_RS01415;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AB69_RS01415;old_locus_tag=AB69_4525 NZ_JHDO01000128.1 Protein Homology CDS 19994 20662 . - 0 ID=cds-WP_000697915.1;Parent=gene-AB69_RS01415;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AB69_RS01415;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 20659 22302 . - . ID=gene-AB69_RS01410;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AB69_RS01410;old_locus_tag=AB69_4526 NZ_JHDO01000128.1 Protein Homology CDS 20659 22302 . - 0 ID=cds-WP_000919792.1;Parent=gene-AB69_RS01410;Dbxref=GenBank:WP_000919792.1;Name=WP_000919792.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AB69_RS01410;product=phosphoethanolamine transferase EptA;protein_id=WP_000919792.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 22406 23743 . - . ID=gene-AB69_RS01405;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AB69_RS01405;old_locus_tag=AB69_4527 NZ_JHDO01000128.1 Protein Homology CDS 22406 23743 . - 0 ID=cds-WP_000093154.1;Parent=gene-AB69_RS01405;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AB69_RS01405;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 23880 24641 . - . ID=gene-AB69_RS01400;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AB69_RS01400;old_locus_tag=AB69_4528 NZ_JHDO01000128.1 Protein Homology CDS 23880 24641 . - 0 ID=cds-WP_001217060.1;Parent=gene-AB69_RS01400;Dbxref=GenBank:WP_001217060.1;Name=WP_001217060.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418540.1;locus_tag=AB69_RS01400;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217060.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 24966 27233 . - . ID=gene-AB69_RS01395;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AB69_RS01395;old_locus_tag=AB69_4529 NZ_JHDO01000128.1 Protein Homology CDS 24966 27233 . - 0 ID=cds-WP_077698091.1;Parent=gene-AB69_RS01395;Dbxref=GenBank:WP_077698091.1;Name=WP_077698091.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AB69_RS01395;product=arginine decarboxylase;protein_id=WP_077698091.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 27432 28340 . - . ID=gene-AB69_RS01390;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AB69_RS01390;old_locus_tag=AB69_4530 NZ_JHDO01000128.1 Protein Homology CDS 27432 28340 . - 0 ID=cds-WP_001090758.1;Parent=gene-AB69_RS01390;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AB69_RS01390;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 28623 29978 . + . ID=gene-AB69_RS01385;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AB69_RS01385;old_locus_tag=AB69_4531 NZ_JHDO01000128.1 Protein Homology CDS 28623 29978 . + 0 ID=cds-WP_000986601.1;Parent=gene-AB69_RS01385;Dbxref=GenBank:WP_000986601.1;Name=WP_000986601.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AB69_RS01385;product=alpha-galactosidase;protein_id=WP_000986601.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 30081 31502 . + . ID=gene-AB69_RS01380;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AB69_RS01380;old_locus_tag=AB69_4532 NZ_JHDO01000128.1 Protein Homology CDS 30081 31502 . + 0 ID=cds-WP_032230933.1;Parent=gene-AB69_RS01380;Dbxref=GenBank:WP_032230933.1;Name=WP_032230933.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AB69_RS01380;product=melibiose:sodium transporter MelB;protein_id=WP_032230933.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 31641 32270 . - . ID=gene-AB69_RS01375;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AB69_RS01375;old_locus_tag=AB69_4533 NZ_JHDO01000128.1 Protein Homology CDS 31641 32270 . - 0 ID=cds-WP_000198773.1;Parent=gene-AB69_RS01375;Dbxref=GenBank:WP_000198773.1;Name=WP_000198773.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418545.1;locus_tag=AB69_RS01375;product=DUF2238 domain-containing protein;protein_id=WP_000198773.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 32393 34039 . - . ID=gene-AB69_RS01370;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB69_RS01370;old_locus_tag=AB69_4535 NZ_JHDO01000128.1 Protein Homology CDS 32393 34039 . - 0 ID=cds-WP_032235714.1;Parent=gene-AB69_RS01370;Dbxref=GenBank:WP_032235714.1;Name=WP_032235714.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AB69_RS01370;product=class I fumarate hydratase;protein_id=WP_032235714.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 34117 35457 . - . ID=gene-AB69_RS01365;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AB69_RS01365;old_locus_tag=AB69_4536 NZ_JHDO01000128.1 Protein Homology CDS 34117 35457 . - 0 ID=cds-WP_000899522.1;Parent=gene-AB69_RS01365;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AB69_RS01365;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 36028 36747 . - . ID=gene-AB69_RS01360;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AB69_RS01360;old_locus_tag=AB69_4537 NZ_JHDO01000128.1 Protein Homology CDS 36028 36747 . - 0 ID=cds-WP_000611288.1;Parent=gene-AB69_RS01360;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AB69_RS01360;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 36744 38375 . - . ID=gene-AB69_RS01355;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AB69_RS01355;old_locus_tag=AB69_4538 NZ_JHDO01000128.1 Protein Homology CDS 36744 38375 . - 0 ID=cds-WP_001216477.1;Parent=gene-AB69_RS01355;Dbxref=GenBank:WP_001216477.1;Name=WP_001216477.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AB69_RS01355;product=sensor histidine kinase;protein_id=WP_001216477.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 38556 38786 . + . ID=gene-AB69_RS01350;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AB69_RS01350;old_locus_tag=AB69_4540 NZ_JHDO01000128.1 Protein Homology CDS 38556 38786 . + 0 ID=cds-WP_000371704.1;Parent=gene-AB69_RS01350;Dbxref=GenBank:WP_000371704.1;Name=WP_000371704.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AB69_RS01350;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371704.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 38798 39070 . + . ID=gene-AB69_RS01345;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AB69_RS01345;old_locus_tag=AB69_4541 NZ_JHDO01000128.1 Protein Homology CDS 38798 39070 . + 0 ID=cds-WP_000405651.1;Parent=gene-AB69_RS01345;Dbxref=GenBank:WP_000405651.1;Name=WP_000405651.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418551.1;locus_tag=AB69_RS01345;product=GNAT family N-acetyltransferase;protein_id=WP_000405651.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 39297 39593 . + . ID=gene-AB69_RS01340;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB69_RS01340;old_locus_tag=AB69_4542 NZ_JHDO01000128.1 Protein Homology CDS 39297 39593 . + 0 ID=cds-WP_000398619.1;Parent=gene-AB69_RS01340;Dbxref=GenBank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AB69_RS01340;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 39621 39794 . + . ID=gene-AB69_RS01335;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AB69_RS01335;old_locus_tag=AB69_4543 NZ_JHDO01000128.1 Protein Homology CDS 39621 39794 . + 0 ID=cds-WP_001173343.1;Parent=gene-AB69_RS01335;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AB69_RS01335;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 39913 41430 . - . ID=gene-AB69_RS01330;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB69_RS01330;old_locus_tag=AB69_4544 NZ_JHDO01000128.1 Protein Homology CDS 39913 41430 . - 0 ID=cds-WP_001295074.1;Parent=gene-AB69_RS01330;Dbxref=GenBank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB69_RS01330;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 41667 43124 . - . ID=gene-AB69_RS01325;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AB69_RS01325;old_locus_tag=AB69_4545 NZ_JHDO01000128.1 Protein Homology CDS 41667 43124 . - 0 ID=cds-WP_000856829.1;Parent=gene-AB69_RS01325;Dbxref=GenBank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AB69_RS01325;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856829.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 43183 45330 . - . ID=gene-AB69_RS01320;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AB69_RS01320;old_locus_tag=AB69_4546 NZ_JHDO01000128.1 Protein Homology CDS 43183 45330 . - 0 ID=cds-WP_001295383.1;Parent=gene-AB69_RS01320;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AB69_RS01320;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 45410 46744 . - . ID=gene-AB69_RS01315;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AB69_RS01315;old_locus_tag=AB69_4547 NZ_JHDO01000128.1 Protein Homology CDS 45410 46744 . - 0 ID=cds-WP_000092909.1;Parent=gene-AB69_RS01315;Dbxref=GenBank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AB69_RS01315;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 47109 48647 . - . ID=gene-AB69_RS01310;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AB69_RS01310;old_locus_tag=AB69_4548 NZ_JHDO01000128.1 Protein Homology CDS 47109 48647 . - 0 ID=cds-WP_001187173.1;Parent=gene-AB69_RS01310;Dbxref=GenBank:WP_001187173.1;Name=WP_001187173.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418557.1;locus_tag=AB69_RS01310;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187173.1;transl_table=11 NZ_JHDO01000128.1 RefSeq pseudogene 48907 49066 . - . ID=gene-AB69_RS30915;Name=AB69_RS30915;end_range=49066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS30915;partial=true;pseudo=true NZ_JHDO01000128.1 Protein Homology CDS 48907 49066 . - 0 ID=cds-AB69_RS30915;Parent=gene-AB69_RS30915;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=49066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AB69_RS30915;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 49264 49339 . - . ID=gene-AB69_RS01305;Name=AB69_RS01305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS01305;old_locus_tag=AB69_4549 NZ_JHDO01000128.1 tRNAscan-SE tRNA 49264 49339 . - . ID=rna-AB69_RS01305;Parent=gene-AB69_RS01305;anticodon=(pos:complement(49304..49306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01305;product=tRNA-Phe NZ_JHDO01000128.1 tRNAscan-SE exon 49264 49339 . - . ID=exon-AB69_RS01305-1;Parent=rna-AB69_RS01305;anticodon=(pos:complement(49304..49306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01305;product=tRNA-Phe NZ_JHDO01000128.1 RefSeq gene 49446 50021 . - . ID=gene-AB69_RS01300;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AB69_RS01300;old_locus_tag=AB69_4550 NZ_JHDO01000128.1 Protein Homology CDS 49446 50021 . - 0 ID=cds-WP_001188520.1;Parent=gene-AB69_RS01300;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AB69_RS01300;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 50058 51755 . - . ID=gene-AB69_RS01295;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AB69_RS01295;old_locus_tag=AB69_4551 NZ_JHDO01000128.1 Protein Homology CDS 50058 51755 . - 0 ID=cds-WP_000068922.1;Parent=gene-AB69_RS01295;Dbxref=GenBank:WP_000068922.1;Name=WP_000068922.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AB69_RS01295;product=protein-disulfide reductase DsbD;protein_id=WP_000068922.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 51731 52069 . - . ID=gene-AB69_RS01290;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AB69_RS01290;old_locus_tag=AB69_4552 NZ_JHDO01000128.1 Protein Homology CDS 51731 52069 . - 0 ID=cds-WP_000883400.1;Parent=gene-AB69_RS01290;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AB69_RS01290;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 52185 53486 . - . ID=gene-AB69_RS01285;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AB69_RS01285;old_locus_tag=AB69_4553 NZ_JHDO01000128.1 Protein Homology CDS 52185 53486 . - 0 ID=cds-WP_000961959.1;Parent=gene-AB69_RS01285;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AB69_RS01285;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 53604 55040 . - . ID=gene-AB69_RS01280;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AB69_RS01280;old_locus_tag=AB69_4554 NZ_JHDO01000128.1 Protein Homology CDS 53604 55040 . - 0 ID=cds-WP_000069437.1;Parent=gene-AB69_RS01280;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AB69_RS01280;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 55377 55853 . + . ID=gene-AB69_RS01275;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AB69_RS01275;old_locus_tag=AB69_4555 NZ_JHDO01000128.1 Protein Homology CDS 55377 55853 . + 0 ID=cds-WP_001267448.1;Parent=gene-AB69_RS01275;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AB69_RS01275;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 55869 57125 . - . ID=gene-AB69_RS01270;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AB69_RS01270;old_locus_tag=AB69_4556 NZ_JHDO01000128.1 Protein Homology CDS 55869 57125 . - 0 ID=cds-WP_000015837.1;Parent=gene-AB69_RS01270;Dbxref=GenBank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AB69_RS01270;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 57401 57694 . + . ID=gene-AB69_RS01265;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AB69_RS01265;old_locus_tag=AB69_4557 NZ_JHDO01000128.1 Protein Homology CDS 57401 57694 . + 0 ID=cds-WP_001026276.1;Parent=gene-AB69_RS01265;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AB69_RS01265;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 57738 59384 . + . ID=gene-AB69_RS01260;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AB69_RS01260;old_locus_tag=AB69_4558 NZ_JHDO01000128.1 Protein Homology CDS 57738 59384 . + 0 ID=cds-WP_000729117.1;Parent=gene-AB69_RS01260;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AB69_RS01260;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 59522 59875 . + . ID=gene-AB69_RS01255;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AB69_RS01255;old_locus_tag=AB69_4559 NZ_JHDO01000128.1 Protein Homology CDS 59522 59875 . + 0 ID=cds-WP_000558209.1;Parent=gene-AB69_RS01255;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AB69_RS01255;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 60078 60947 . - . ID=gene-AB69_RS01250;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AB69_RS01250;old_locus_tag=AB69_4560 NZ_JHDO01000128.1 Protein Homology CDS 60078 60947 . - 0 ID=cds-WP_001008040.1;Parent=gene-AB69_RS01250;Dbxref=GenBank:WP_001008040.1;Name=WP_001008040.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418569.1;locus_tag=AB69_RS01250;product=YjeJ family protein;protein_id=WP_001008040.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 61342 62370 . - . ID=gene-AB69_RS01245;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AB69_RS01245;old_locus_tag=AB69_4561 NZ_JHDO01000128.1 Protein Homology CDS 61342 62370 . - 0 ID=cds-WP_000940549.1;Parent=gene-AB69_RS01245;Dbxref=GenBank:WP_000940549.1;Name=WP_000940549.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418570.1;locus_tag=AB69_RS01245;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940549.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 62412 62978 . + . ID=gene-AB69_RS01240;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AB69_RS01240;old_locus_tag=AB69_4562 NZ_JHDO01000128.1 Protein Homology CDS 62412 62978 . + 0 ID=cds-WP_000257278.1;Parent=gene-AB69_RS01240;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AB69_RS01240;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 63030 63155 . + . ID=gene-AB69_RS01235;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AB69_RS01235;old_locus_tag=AB69_4563 NZ_JHDO01000128.1 Protein Homology CDS 63030 63155 . + 0 ID=cds-WP_000977757.1;Parent=gene-AB69_RS01235;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AB69_RS01235;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 63266 63412 . + . ID=gene-AB69_RS01230;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AB69_RS01230;old_locus_tag=AB69_4564 NZ_JHDO01000128.1 Protein Homology CDS 63266 63412 . + 0 ID=cds-WP_000239596.1;Parent=gene-AB69_RS01230;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AB69_RS01230;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 63588 63905 . + . ID=gene-AB69_RS01225;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AB69_RS01225;old_locus_tag=AB69_4565 NZ_JHDO01000128.1 Protein Homology CDS 63588 63905 . + 0 ID=cds-WP_000118482.1;Parent=gene-AB69_RS01225;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AB69_RS01225;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 63902 64435 . - . ID=gene-AB69_RS01220;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AB69_RS01220;old_locus_tag=AB69_4566 NZ_JHDO01000128.1 Protein Homology CDS 63902 64435 . - 0 ID=cds-WP_001238378.1;Parent=gene-AB69_RS01220;Dbxref=GenBank:WP_001238378.1;Name=WP_001238378.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AB69_RS01220;product=lipocalin Blc;protein_id=WP_001238378.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 64524 65657 . - . ID=gene-AB69_RS01215;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AB69_RS01215;old_locus_tag=AB69_4567 NZ_JHDO01000128.1 Protein Homology CDS 64524 65657 . - 0 ID=cds-WP_001336292.1;Parent=gene-AB69_RS01215;Dbxref=GenBank:WP_001336292.1;Name=WP_001336292.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AB69_RS01215;product=BlaEC family class C beta-lactamase;protein_id=WP_001336292.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 65720 66079 . - . ID=gene-AB69_RS01210;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AB69_RS01210;old_locus_tag=AB69_4568 NZ_JHDO01000128.1 Protein Homology CDS 65720 66079 . - 0 ID=cds-WP_000609663.1;Parent=gene-AB69_RS01210;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AB69_RS01210;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 66090 66485 . - . ID=gene-AB69_RS01205;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AB69_RS01205;old_locus_tag=AB69_4569 NZ_JHDO01000128.1 Protein Homology CDS 66090 66485 . - 0 ID=cds-WP_000208757.1;Parent=gene-AB69_RS01205;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AB69_RS01205;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 66496 67230 . - . ID=gene-AB69_RS01200;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AB69_RS01200;old_locus_tag=AB69_4570 NZ_JHDO01000128.1 Protein Homology CDS 66496 67230 . - 0 ID=cds-WP_000829498.1;Parent=gene-AB69_RS01200;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AB69_RS01200;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 67223 69031 . - . ID=gene-AB69_RS01195;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AB69_RS01195;old_locus_tag=AB69_4571 NZ_JHDO01000128.1 Protein Homology CDS 67223 69031 . - 0 ID=cds-WP_001192973.1;Parent=gene-AB69_RS01195;Dbxref=GenBank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AB69_RS01195;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 69356 70333 . + . ID=gene-AB69_RS01190;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AB69_RS01190;old_locus_tag=AB69_4572 NZ_JHDO01000128.1 Protein Homology CDS 69356 70333 . + 0 ID=cds-WP_000004771.1;Parent=gene-AB69_RS01190;Dbxref=GenBank:WP_000004771.1;Name=WP_000004771.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AB69_RS01190;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 70552 72054 . + . ID=gene-AB69_RS01185;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AB69_RS01185;old_locus_tag=AB69_4573 NZ_JHDO01000128.1 Protein Homology CDS 70552 72054 . + 0 ID=cds-WP_001336293.1;Parent=gene-AB69_RS01185;Dbxref=GenBank:WP_001336293.1;Name=WP_001336293.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AB69_RS01185;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001336293.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 72106 72420 . + . ID=gene-AB69_RS01180;Name=yjeN;gbkey=Gene;gene=yjeN;gene_biotype=protein_coding;locus_tag=AB69_RS01180;old_locus_tag=AB69_4574 NZ_JHDO01000128.1 Protein Homology CDS 72106 72420 . + 0 ID=cds-WP_000342867.1;Parent=gene-AB69_RS01180;Dbxref=GenBank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;gene=yjeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418581.1;locus_tag=AB69_RS01180;product=protein YjeN;protein_id=WP_000342867.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 72417 72731 . + . ID=gene-AB69_RS01175;Name=yjeO;gbkey=Gene;gene=yjeO;gene_biotype=protein_coding;locus_tag=AB69_RS01175;old_locus_tag=AB69_4575 NZ_JHDO01000128.1 Protein Homology CDS 72417 72731 . + 0 ID=cds-WP_001276180.1;Parent=gene-AB69_RS01175;Dbxref=GenBank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;gene=yjeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418582.1;locus_tag=AB69_RS01175;product=YjeO family protein;protein_id=WP_001276180.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 72760 76083 . - . ID=gene-AB69_RS01170;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AB69_RS01170;old_locus_tag=AB69_4576 NZ_JHDO01000128.1 Protein Homology CDS 72760 76083 . - 0 ID=cds-WP_001236847.1;Parent=gene-AB69_RS01170;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AB69_RS01170;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 76105 77073 . - . ID=gene-AB69_RS01165;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB69_RS01165;old_locus_tag=AB69_4577 NZ_JHDO01000128.1 Protein Homology CDS 76105 77073 . - 0 ID=cds-WP_000934920.1;Parent=gene-AB69_RS01165;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AB69_RS01165;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 77170 78222 . - . ID=gene-AB69_RS01160;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB69_RS01160;old_locus_tag=AB69_4578 NZ_JHDO01000128.1 Protein Homology CDS 77170 78222 . - 0 ID=cds-WP_000041964.1;Parent=gene-AB69_RS01160;Dbxref=GenBank:WP_000041964.1;Name=WP_000041964.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418585.4;locus_tag=AB69_RS01160;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041964.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 78317 78862 . + . ID=gene-AB69_RS01155;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB69_RS01155;old_locus_tag=AB69_4579 NZ_JHDO01000128.1 Protein Homology CDS 78317 78862 . + 0 ID=cds-WP_001295188.1;Parent=gene-AB69_RS01155;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB69_RS01155;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 79073 79148 . + . ID=gene-AB69_RS01150;Name=AB69_RS01150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS01150;old_locus_tag=AB69_4580 NZ_JHDO01000128.1 tRNAscan-SE tRNA 79073 79148 . + . ID=rna-AB69_RS01150;Parent=gene-AB69_RS01150;anticodon=(pos:79106..79108);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01150;product=tRNA-Gly NZ_JHDO01000128.1 tRNAscan-SE exon 79073 79148 . + . ID=exon-AB69_RS01150-1;Parent=rna-AB69_RS01150;anticodon=(pos:79106..79108);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01150;product=tRNA-Gly NZ_JHDO01000128.1 RefSeq gene 79185 79260 . + . ID=gene-AB69_RS01145;Name=AB69_RS01145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS01145;old_locus_tag=AB69_4581 NZ_JHDO01000128.1 tRNAscan-SE tRNA 79185 79260 . + . ID=rna-AB69_RS01145;Parent=gene-AB69_RS01145;anticodon=(pos:79218..79220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01145;product=tRNA-Gly NZ_JHDO01000128.1 tRNAscan-SE exon 79185 79260 . + . ID=exon-AB69_RS01145-1;Parent=rna-AB69_RS01145;anticodon=(pos:79218..79220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01145;product=tRNA-Gly NZ_JHDO01000128.1 RefSeq gene 79296 79371 . + . ID=gene-AB69_RS01140;Name=AB69_RS01140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS01140;old_locus_tag=AB69_4582 NZ_JHDO01000128.1 tRNAscan-SE tRNA 79296 79371 . + . ID=rna-AB69_RS01140;Parent=gene-AB69_RS01140;anticodon=(pos:79329..79331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01140;product=tRNA-Gly NZ_JHDO01000128.1 tRNAscan-SE exon 79296 79371 . + . ID=exon-AB69_RS01140-1;Parent=rna-AB69_RS01140;anticodon=(pos:79329..79331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS01140;product=tRNA-Gly NZ_JHDO01000128.1 RefSeq gene 79605 79658 . + . ID=gene-AB69_RS29570;Name=AB69_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS29570 NZ_JHDO01000128.1 Protein Homology CDS 79605 79658 . + 0 ID=cds-WP_010723271.1;Parent=gene-AB69_RS29570;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB69_RS29570;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 79641 80780 . - . ID=gene-AB69_RS01135;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB69_RS01135;old_locus_tag=AB69_4583 NZ_JHDO01000128.1 Protein Homology CDS 79641 80780 . - 0 ID=cds-WP_001294219.1;Parent=gene-AB69_RS01135;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB69_RS01135;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 80779 82326 . + . ID=gene-AB69_RS01130;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AB69_RS01130;old_locus_tag=AB69_4584 NZ_JHDO01000128.1 Protein Homology CDS 80779 82326 . + 0 ID=cds-WP_001295189.1;Parent=gene-AB69_RS01130;Dbxref=GenBank:WP_001295189.1;Name=WP_001295189.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AB69_RS01130;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001295189.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 82298 82759 . + . ID=gene-AB69_RS01125;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AB69_RS01125;old_locus_tag=AB69_4585 NZ_JHDO01000128.1 Protein Homology CDS 82298 82759 . + 0 ID=cds-WP_032230937.1;Parent=gene-AB69_RS01125;Dbxref=GenBank:WP_032230937.1;Name=WP_032230937.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AB69_RS01125;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_032230937.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 82778 84115 . + . ID=gene-AB69_RS01120;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AB69_RS01120;old_locus_tag=AB69_4586 NZ_JHDO01000128.1 Protein Homology CDS 82778 84115 . + 0 ID=cds-WP_000990333.1;Parent=gene-AB69_RS01120;Dbxref=GenBank:WP_000990333.1;Name=WP_000990333.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AB69_RS01120;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990333.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 84125 85972 . + . ID=gene-AB69_RS01115;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AB69_RS01115;old_locus_tag=AB69_4587 NZ_JHDO01000128.1 Protein Homology CDS 84125 85972 . + 0 ID=cds-WP_001122505.1;Parent=gene-AB69_RS01115;Dbxref=GenBank:WP_001122505.1;Name=WP_001122505.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AB69_RS01115;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122505.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 85965 86915 . + . ID=gene-AB69_RS01110;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AB69_RS01110;old_locus_tag=AB69_4588 NZ_JHDO01000128.1 Protein Homology CDS 85965 86915 . + 0 ID=cds-WP_001280345.1;Parent=gene-AB69_RS01110;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AB69_RS01110;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 87001 87309 . + . ID=gene-AB69_RS01105;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AB69_RS01105;old_locus_tag=AB69_4589 NZ_JHDO01000128.1 Protein Homology CDS 87001 87309 . + 0 ID=cds-WP_001051883.1;Parent=gene-AB69_RS01105;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AB69_RS01105;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 87385 88665 . + . ID=gene-AB69_RS01100;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AB69_RS01100;old_locus_tag=AB69_4590 NZ_JHDO01000128.1 Protein Homology CDS 87385 88665 . + 0 ID=cds-WP_000460360.1;Parent=gene-AB69_RS01100;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AB69_RS01100;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 88751 90010 . + . ID=gene-AB69_RS01095;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AB69_RS01095;old_locus_tag=AB69_4591 NZ_JHDO01000128.1 Protein Homology CDS 88751 90010 . + 0 ID=cds-WP_032230938.1;Parent=gene-AB69_RS01095;Dbxref=GenBank:WP_032230938.1;Name=WP_032230938.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AB69_RS01095;product=FtsH protease activity modulator HflK;protein_id=WP_032230938.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 90013 91017 . + . ID=gene-AB69_RS01090;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AB69_RS01090;old_locus_tag=AB69_4592 NZ_JHDO01000128.1 Protein Homology CDS 90013 91017 . + 0 ID=cds-WP_001232412.1;Parent=gene-AB69_RS01090;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AB69_RS01090;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 91099 91296 . + . ID=gene-AB69_RS01085;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AB69_RS01085;old_locus_tag=AB69_4593 NZ_JHDO01000128.1 Protein Homology CDS 91099 91296 . + 0 ID=cds-WP_001089295.1;Parent=gene-AB69_RS01085;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AB69_RS01085;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 91400 92698 . + . ID=gene-AB69_RS01080;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AB69_RS01080;old_locus_tag=AB69_4594 NZ_JHDO01000128.1 Protein Homology CDS 91400 92698 . + 0 ID=cds-WP_000527955.1;Parent=gene-AB69_RS01080;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AB69_RS01080;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 92903 93328 . + . ID=gene-AB69_RS01075;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AB69_RS01075;old_locus_tag=AB69_4595 NZ_JHDO01000128.1 Protein Homology CDS 92903 93328 . + 0 ID=cds-WP_001177639.1;Parent=gene-AB69_RS01075;Dbxref=GenBank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AB69_RS01075;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 93367 95808 . + . ID=gene-AB69_RS01070;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AB69_RS01070;old_locus_tag=AB69_4596 NZ_JHDO01000128.1 Protein Homology CDS 93367 95808 . + 0 ID=cds-WP_000076332.1;Parent=gene-AB69_RS01070;Dbxref=GenBank:WP_000076332.1;Name=WP_000076332.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AB69_RS01070;product=ribonuclease R;protein_id=WP_000076332.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 95988 96719 . + . ID=gene-AB69_RS01065;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AB69_RS01065;old_locus_tag=AB69_4597 NZ_JHDO01000128.1 Protein Homology CDS 95988 96719 . + 0 ID=cds-WP_001293282.1;Parent=gene-AB69_RS01065;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AB69_RS01065;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 96846 97247 . + . ID=gene-AB69_RS01060;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AB69_RS01060;old_locus_tag=AB69_4598 NZ_JHDO01000128.1 Protein Homology CDS 96846 97247 . + 0 ID=cds-WP_000220128.1;Parent=gene-AB69_RS01060;Dbxref=GenBank:WP_000220128.1;Name=WP_000220128.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AB69_RS01060;product=YjfI family protein;protein_id=WP_000220128.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 97266 97964 . + . ID=gene-AB69_RS01055;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AB69_RS01055;old_locus_tag=AB69_4599 NZ_JHDO01000128.1 Protein Homology CDS 97266 97964 . + 0 ID=cds-WP_000511955.1;Parent=gene-AB69_RS01055;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AB69_RS01055;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 98015 98674 . + . ID=gene-AB69_RS01050;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AB69_RS01050;old_locus_tag=AB69_4600 NZ_JHDO01000128.1 Protein Homology CDS 98015 98674 . + 0 ID=cds-WP_000012550.1;Parent=gene-AB69_RS01050;Dbxref=GenBank:WP_000012550.1;Name=WP_000012550.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AB69_RS01050;product=YjfK family protein;protein_id=WP_000012550.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 98692 99090 . + . ID=gene-AB69_RS01045;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AB69_RS01045;old_locus_tag=AB69_4601 NZ_JHDO01000128.1 Protein Homology CDS 98692 99090 . + 0 ID=cds-WP_000547760.1;Parent=gene-AB69_RS01045;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AB69_RS01045;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 99100 99738 . + . ID=gene-AB69_RS01040;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AB69_RS01040;old_locus_tag=AB69_4602 NZ_JHDO01000128.1 Protein Homology CDS 99100 99738 . + 0 ID=cds-WP_000101685.1;Parent=gene-AB69_RS01040;Dbxref=GenBank:WP_000101685.1;Name=WP_000101685.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418606.1;locus_tag=AB69_RS01040;product=DUF1190 domain-containing protein;protein_id=WP_000101685.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 99741 100904 . + . ID=gene-AB69_RS01035;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AB69_RS01035;old_locus_tag=AB69_4603 NZ_JHDO01000128.1 Protein Homology CDS 99741 100904 . + 0 ID=cds-WP_000943964.1;Parent=gene-AB69_RS01035;Dbxref=GenBank:WP_000943964.1;Name=WP_000943964.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AB69_RS01035;product=glutathionylspermidine synthase family protein;protein_id=WP_000943964.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 100988 102613 . + . ID=gene-AB69_RS01030;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AB69_RS01030;old_locus_tag=AB69_4604 NZ_JHDO01000128.1 Protein Homology CDS 100988 102613 . + 0 ID=cds-WP_001295190.1;Parent=gene-AB69_RS01030;Dbxref=GenBank:WP_001295190.1;Name=WP_001295190.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AB69_RS01030;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001295190.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 102730 103005 . - . ID=gene-AB69_RS01025;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AB69_RS01025;old_locus_tag=AB69_4605 NZ_JHDO01000128.1 Protein Homology CDS 102730 103005 . - 0 ID=cds-WP_000811566.1;Parent=gene-AB69_RS01025;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AB69_RS01025;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 103154 103483 . - . ID=gene-AB69_RS01020;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AB69_RS01020;old_locus_tag=AB69_4606 NZ_JHDO01000128.1 Protein Homology CDS 103154 103483 . - 0 ID=cds-WP_000254633.1;Parent=gene-AB69_RS01020;Dbxref=GenBank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AB69_RS01020;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 103665 104414 . + . ID=gene-AB69_RS01015;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AB69_RS01015;old_locus_tag=AB69_4607 NZ_JHDO01000128.1 Protein Homology CDS 103665 104414 . + 0 ID=cds-WP_000569678.1;Parent=gene-AB69_RS01015;Dbxref=GenBank:WP_000569678.1;Name=WP_000569678.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418611.1;locus_tag=AB69_RS01015;product=esterase;protein_id=WP_000569678.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 104411 105166 . - . ID=gene-AB69_RS01010;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AB69_RS01010;old_locus_tag=AB69_4608 NZ_JHDO01000128.1 Protein Homology CDS 104411 105166 . - 0 ID=cds-WP_000133631.1;Parent=gene-AB69_RS01010;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AB69_RS01010;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 105274 106338 . - . ID=gene-AB69_RS01005;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AB69_RS01005;old_locus_tag=AB69_4609 NZ_JHDO01000128.1 Protein Homology CDS 105274 106338 . - 0 ID=cds-WP_001301370.1;Parent=gene-AB69_RS01005;Dbxref=GenBank:WP_001301370.1;Name=WP_001301370.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AB69_RS01005;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 106693 108090 . + . ID=gene-AB69_RS01000;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AB69_RS01000;old_locus_tag=AB69_4610 NZ_JHDO01000128.1 Protein Homology CDS 106693 108090 . + 0 ID=cds-WP_001300695.1;Parent=gene-AB69_RS01000;Dbxref=GenBank:WP_001300695.1;Name=WP_001300695.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AB69_RS01000;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001300695.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 108106 108411 . + . ID=gene-AB69_RS00995;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AB69_RS00995;old_locus_tag=AB69_4611 NZ_JHDO01000128.1 Protein Homology CDS 108106 108411 . + 0 ID=cds-WP_000218362.1;Parent=gene-AB69_RS00995;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AB69_RS00995;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 108421 108885 . + . ID=gene-AB69_RS00990;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AB69_RS00990;old_locus_tag=AB69_4612 NZ_JHDO01000128.1 Protein Homology CDS 108421 108885 . + 0 ID=cds-WP_000776505.1;Parent=gene-AB69_RS00990;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AB69_RS00990;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 108899 109549 . + . ID=gene-AB69_RS00985;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB69_RS00985;old_locus_tag=AB69_4613 NZ_JHDO01000128.1 Protein Homology CDS 108899 109549 . + 0 ID=cds-WP_000056760.1;Parent=gene-AB69_RS00985;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AB69_RS00985;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 109559 110413 . + . ID=gene-AB69_RS00980;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AB69_RS00980;old_locus_tag=AB69_4614 NZ_JHDO01000128.1 Protein Homology CDS 109559 110413 . + 0 ID=cds-WP_000949511.1;Parent=gene-AB69_RS00980;Dbxref=GenBank:WP_000949511.1;Name=WP_000949511.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AB69_RS00980;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949511.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 110413 111099 . + . ID=gene-AB69_RS00975;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AB69_RS00975;old_locus_tag=AB69_4615 NZ_JHDO01000128.1 Protein Homology CDS 110413 111099 . + 0 ID=cds-WP_001170848.1;Parent=gene-AB69_RS00975;Dbxref=GenBank:WP_001170848.1;Name=WP_001170848.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418619.1;locus_tag=AB69_RS00975;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170848.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 111228 111503 . - . ID=gene-AB69_RS00970;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AB69_RS00970;old_locus_tag=AB69_4616 NZ_JHDO01000128.1 Protein Homology CDS 111228 111503 . - 0 ID=cds-WP_000492914.1;Parent=gene-AB69_RS00970;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AB69_RS00970;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 111830 112225 . + . ID=gene-AB69_RS00965;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AB69_RS00965;old_locus_tag=AB69_4617 NZ_JHDO01000128.1 Protein Homology CDS 111830 112225 . + 0 ID=cds-WP_001216676.1;Parent=gene-AB69_RS00965;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AB69_RS00965;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 112232 112546 . + . ID=gene-AB69_RS0125500;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AB69_RS0125500 NZ_JHDO01000128.1 Protein Homology CDS 112232 112546 . + 0 ID=cds-WP_001315977.1;Parent=gene-AB69_RS0125500;Dbxref=GenBank:WP_001315977.1;Name=WP_001315977.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418622.1;locus_tag=AB69_RS0125500;product=primosomal replication protein N;protein_id=WP_001315977.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 112551 112778 . + . ID=gene-AB69_RS00960;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AB69_RS00960;old_locus_tag=AB69_4618 NZ_JHDO01000128.1 Protein Homology CDS 112551 112778 . + 0 ID=cds-WP_000135199.1;Parent=gene-AB69_RS00960;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AB69_RS00960;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 112820 113269 . + . ID=gene-AB69_RS00955;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AB69_RS00955;old_locus_tag=AB69_4619 NZ_JHDO01000128.1 Protein Homology CDS 112820 113269 . + 0 ID=cds-WP_001196062.1;Parent=gene-AB69_RS00955;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AB69_RS00955;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 113340 114134 . - . ID=gene-AB69_RS00950;Name=yjfZ;gbkey=Gene;gene=yjfZ;gene_biotype=protein_coding;locus_tag=AB69_RS00950;old_locus_tag=AB69_4620 NZ_JHDO01000128.1 Protein Homology CDS 113340 114134 . - 0 ID=cds-WP_000174714.1;Parent=gene-AB69_RS00950;Dbxref=GenBank:WP_000174714.1;Name=WP_000174714.1;gbkey=CDS;gene=yjfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418625.1;locus_tag=AB69_RS00950;product=DUF2686 family protein;protein_id=WP_000174714.1;transl_table=11 NZ_JHDO01000128.1 RefSeq pseudogene 114406 114807 . + . ID=gene-AB69_RS00945;Name=AB69_RS00945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS00945;old_locus_tag=AB69_4621;partial=true;pseudo=true;start_range=.,114406 NZ_JHDO01000128.1 Protein Homology CDS 114406 114807 . + 0 ID=cds-AB69_RS00945;Parent=gene-AB69_RS00945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AB69_RS00945;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,114406;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 114791 115429 . - . ID=gene-AB69_RS00940;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AB69_RS00940;old_locus_tag=AB69_4622 NZ_JHDO01000128.1 Protein Homology CDS 114791 115429 . - 0 ID=cds-WP_001119478.1;Parent=gene-AB69_RS00940;Dbxref=GenBank:WP_001119478.1;Name=WP_001119478.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AB69_RS00940;product=cell division protein YtfB;protein_id=WP_001119478.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 115647 116267 . + . ID=gene-AB69_RS00935;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AB69_RS00935;old_locus_tag=AB69_4623 NZ_JHDO01000128.1 Protein Homology CDS 115647 116267 . + 0 ID=cds-WP_000211225.1;Parent=gene-AB69_RS00935;Dbxref=GenBank:WP_000211225.1;Name=WP_000211225.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AB69_RS00935;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 116576 117988 . + . ID=gene-AB69_RS00930;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AB69_RS00930;old_locus_tag=AB69_4624 NZ_JHDO01000128.1 Protein Homology CDS 116576 117988 . + 0 ID=cds-WP_000228346.1;Parent=gene-AB69_RS00930;Dbxref=GenBank:WP_000228346.1;Name=WP_000228346.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AB69_RS00930;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 118033 118695 . - . ID=gene-AB69_RS00925;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AB69_RS00925;old_locus_tag=AB69_4625 NZ_JHDO01000128.1 Protein Homology CDS 118033 118695 . - 0 ID=cds-WP_000331456.1;Parent=gene-AB69_RS00925;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AB69_RS00925;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 118803 119768 . - . ID=gene-AB69_RS00920;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AB69_RS00920;old_locus_tag=AB69_4626 NZ_JHDO01000128.1 Protein Homology CDS 118803 119768 . - 0 ID=cds-WP_001350569.1;Parent=gene-AB69_RS00920;Dbxref=GenBank:WP_001350569.1;Name=WP_001350569.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418631.2;locus_tag=AB69_RS00920;product=DMT family transporter;protein_id=WP_001350569.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 119876 120736 . - . ID=gene-AB69_RS00915;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AB69_RS00915;old_locus_tag=AB69_4627 NZ_JHDO01000128.1 Protein Homology CDS 119876 120736 . - 0 ID=cds-WP_000560561.1;Parent=gene-AB69_RS00915;Dbxref=GenBank:WP_000560561.1;Name=WP_000560561.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418632.1;locus_tag=AB69_RS00915;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560561.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 120825 121205 . + . ID=gene-AB69_RS00910;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AB69_RS00910;old_locus_tag=AB69_4628 NZ_JHDO01000128.1 Protein Homology CDS 120825 121205 . + 0 ID=cds-WP_000084622.1;Parent=gene-AB69_RS00910;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AB69_RS00910;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 121334 123277 . - . ID=gene-AB69_RS00905;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AB69_RS00905;old_locus_tag=AB69_4629 NZ_JHDO01000128.1 Protein Homology CDS 121334 123277 . - 0 ID=cds-WP_032230942.1;Parent=gene-AB69_RS00905;Dbxref=GenBank:WP_032230942.1;Name=WP_032230942.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AB69_RS00905;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_032230942.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 123467 124207 . + . ID=gene-AB69_RS00900;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AB69_RS00900;old_locus_tag=AB69_4630 NZ_JHDO01000128.1 Protein Homology CDS 123467 124207 . + 0 ID=cds-WP_000886919.1;Parent=gene-AB69_RS00900;Dbxref=GenBank:WP_000886919.1;Name=WP_000886919.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418635.1;locus_tag=AB69_RS00900;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886919.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 124419 125357 . + . ID=gene-AB69_RS00895;Name=ytfI;gbkey=Gene;gene=ytfI;gene_biotype=protein_coding;locus_tag=AB69_RS00895;old_locus_tag=AB69_4631 NZ_JHDO01000128.1 Protein Homology CDS 124419 125357 . + 0 ID=cds-WP_000937655.1;Parent=gene-AB69_RS00895;Dbxref=GenBank:WP_000937655.1;Name=WP_000937655.1;gbkey=CDS;gene=ytfI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026285.1;locus_tag=AB69_RS00895;product=protein YtfI;protein_id=WP_000937655.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 125420 125974 . - . ID=gene-AB69_RS00890;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AB69_RS00890;old_locus_tag=AB69_4632 NZ_JHDO01000128.1 Protein Homology CDS 125420 125974 . - 0 ID=cds-WP_000175279.1;Parent=gene-AB69_RS00890;Dbxref=GenBank:WP_000175279.1;Name=WP_000175279.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418637.1;locus_tag=AB69_RS00890;product=YtfJ family protein;protein_id=WP_000175279.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 126299 126505 . + . ID=gene-AB69_RS00885;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AB69_RS00885;old_locus_tag=AB69_4633 NZ_JHDO01000128.1 Protein Homology CDS 126299 126505 . + 0 ID=cds-WP_000689228.1;Parent=gene-AB69_RS00885;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AB69_RS00885;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 126584 127927 . - . ID=gene-AB69_RS00880;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AB69_RS00880;old_locus_tag=AB69_4634 NZ_JHDO01000128.1 Protein Homology CDS 126584 127927 . - 0 ID=cds-WP_000935036.1;Parent=gene-AB69_RS00880;Dbxref=GenBank:WP_000935036.1;Name=WP_000935036.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313223.1;locus_tag=AB69_RS00880;product=hemolysin family protein;protein_id=WP_000935036.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 128250 128888 . - . ID=gene-AB69_RS00875;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AB69_RS00875;old_locus_tag=AB69_4635 NZ_JHDO01000128.1 Protein Homology CDS 128250 128888 . - 0 ID=cds-WP_001295196.1;Parent=gene-AB69_RS00875;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AB69_RS00875;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 129094 130827 . + . ID=gene-AB69_RS00865;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AB69_RS00865;old_locus_tag=AB69_4637 NZ_JHDO01000128.1 Protein Homology CDS 129094 130827 . + 0 ID=cds-WP_001269327.1;Parent=gene-AB69_RS00865;Dbxref=GenBank:WP_001269327.1;Name=WP_001269327.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AB69_RS00865;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 130824 134603 . + . ID=gene-AB69_RS00860;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AB69_RS00860;old_locus_tag=AB69_4638 NZ_JHDO01000128.1 Protein Homology CDS 130824 134603 . + 0 ID=cds-WP_000060911.1;Parent=gene-AB69_RS00860;Dbxref=GenBank:WP_000060911.1;Name=WP_000060911.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418642.1;locus_tag=AB69_RS00860;product=autotransporter assembly complex protein TamB;protein_id=WP_000060911.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 134606 134947 . + . ID=gene-AB69_RS00855;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AB69_RS00855;old_locus_tag=AB69_4639 NZ_JHDO01000128.1 Protein Homology CDS 134606 134947 . + 0 ID=cds-WP_001219160.1;Parent=gene-AB69_RS00855;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AB69_RS00855;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 135159 135410 . + . ID=gene-AB69_RS00850;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AB69_RS00850;old_locus_tag=AB69_4640 NZ_JHDO01000128.1 Protein Homology CDS 135159 135410 . + 0 ID=cds-WP_001223208.1;Parent=gene-AB69_RS00850;Dbxref=GenBank:WP_001223208.1;Name=WP_001223208.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AB69_RS00850;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 135404 135754 . + . ID=gene-AB69_RS00845;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AB69_RS00845;old_locus_tag=AB69_4641 NZ_JHDO01000128.1 Protein Homology CDS 135404 135754 . + 0 ID=cds-WP_000239577.1;Parent=gene-AB69_RS00845;Dbxref=GenBank:WP_000239577.1;Name=WP_000239577.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AB69_RS00845;product=endoribonuclease toxin ChpB;protein_id=WP_000239577.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 135834 136364 . - . ID=gene-AB69_RS00840;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AB69_RS00840;old_locus_tag=AB69_4642 NZ_JHDO01000128.1 Protein Homology CDS 135834 136364 . - 0 ID=cds-WP_000055075.1;Parent=gene-AB69_RS00840;Dbxref=GenBank:WP_000055075.1;Name=WP_000055075.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AB69_RS00840;product=inorganic diphosphatase;protein_id=WP_000055075.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 136674 137630 . + . ID=gene-AB69_RS00835;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AB69_RS00835;old_locus_tag=AB69_4643 NZ_JHDO01000128.1 Protein Homology CDS 136674 137630 . + 0 ID=cds-WP_000265913.1;Parent=gene-AB69_RS00835;Dbxref=GenBank:WP_000265913.1;Name=WP_000265913.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418648.1;locus_tag=AB69_RS00835;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265913.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 137770 139272 . + . ID=gene-AB69_RS00830;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AB69_RS00830;old_locus_tag=AB69_4644 NZ_JHDO01000128.1 Protein Homology CDS 137770 139272 . + 0 ID=cds-WP_000205805.1;Parent=gene-AB69_RS00830;Dbxref=GenBank:WP_000205805.1;Name=WP_000205805.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AB69_RS00830;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000205805.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 139286 140308 . + . ID=gene-AB69_RS00825;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AB69_RS00825;old_locus_tag=AB69_4645 NZ_JHDO01000128.1 Protein Homology CDS 139286 140308 . + 0 ID=cds-WP_001313531.1;Parent=gene-AB69_RS00825;Dbxref=GenBank:WP_001313531.1;Name=WP_001313531.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AB69_RS00825;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001313531.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 140295 141290 . + . ID=gene-AB69_RS00820;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AB69_RS00820;old_locus_tag=AB69_4646 NZ_JHDO01000128.1 Protein Homology CDS 140295 141290 . + 0 ID=cds-WP_000596015.1;Parent=gene-AB69_RS00820;Dbxref=GenBank:WP_000596015.1;Name=WP_000596015.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AB69_RS00820;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596015.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 141323 142321 . - . ID=gene-AB69_RS00815;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AB69_RS00815;old_locus_tag=AB69_4647 NZ_JHDO01000128.1 Protein Homology CDS 141323 142321 . - 0 ID=cds-WP_000853753.1;Parent=gene-AB69_RS00815;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AB69_RS00815;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 142497 143870 . + . ID=gene-AB69_RS00810;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AB69_RS00810;old_locus_tag=AB69_4649 NZ_JHDO01000128.1 Protein Homology CDS 142497 143870 . + 0 ID=cds-WP_001219814.1;Parent=gene-AB69_RS00810;Dbxref=GenBank:WP_001219814.1;Name=WP_001219814.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709968.1;locus_tag=AB69_RS00810;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219814.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 144026 144577 . - . ID=gene-AB69_RS00805;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AB69_RS00805;old_locus_tag=AB69_4650 NZ_JHDO01000128.1 Protein Homology CDS 144026 144577 . - 0 ID=cds-WP_000166270.1;Parent=gene-AB69_RS00805;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AB69_RS00805;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 144671 146023 . + . ID=gene-AB69_RS00800;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AB69_RS00800;old_locus_tag=AB69_4651 NZ_JHDO01000128.1 Protein Homology CDS 144671 146023 . + 0 ID=cds-WP_001162171.1;Parent=gene-AB69_RS00800;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AB69_RS00800;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 146207 146593 . + . ID=gene-AB69_RS00795;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AB69_RS00795;old_locus_tag=AB69_4652 NZ_JHDO01000128.1 Protein Homology CDS 146207 146593 . + 0 ID=cds-WP_001232245.1;Parent=gene-AB69_RS00795;Dbxref=GenBank:WP_001232245.1;Name=WP_001232245.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AB69_RS00795;product=cytochrome b562;protein_id=WP_001232245.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 146638 147102 . - . ID=gene-AB69_RS00790;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AB69_RS00790;old_locus_tag=AB69_4653 NZ_JHDO01000128.1 Protein Homology CDS 146638 147102 . - 0 ID=cds-WP_001106233.1;Parent=gene-AB69_RS00790;Dbxref=GenBank:WP_001106233.1;Name=WP_001106233.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AB69_RS00790;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 147260 149398 . - . ID=gene-AB69_RS00785;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AB69_RS00785;old_locus_tag=AB69_4654 NZ_JHDO01000128.1 Protein Homology CDS 147260 149398 . - 0 ID=cds-WP_000187777.1;Parent=gene-AB69_RS00785;Dbxref=GenBank:WP_000187777.1;Name=WP_000187777.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AB69_RS00785;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187777.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 149792 151447 . - . ID=gene-AB69_RS00780;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AB69_RS00780;old_locus_tag=AB69_4656 NZ_JHDO01000128.1 Protein Homology CDS 149792 151447 . - 0 ID=cds-WP_001336303.1;Parent=gene-AB69_RS00780;Dbxref=GenBank:WP_001336303.1;Name=WP_001336303.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418660.1;locus_tag=AB69_RS00780;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001336303.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 151497 152918 . - . ID=gene-AB69_RS00775;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AB69_RS00775;old_locus_tag=AB69_4657 NZ_JHDO01000128.1 Protein Homology CDS 151497 152918 . - 0 ID=cds-WP_001299664.1;Parent=gene-AB69_RS00775;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AB69_RS00775;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 153037 153984 . - . ID=gene-AB69_RS00770;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AB69_RS00770;old_locus_tag=AB69_4658 NZ_JHDO01000128.1 Protein Homology CDS 153037 153984 . - 0 ID=cds-WP_001181307.1;Parent=gene-AB69_RS00770;Dbxref=GenBank:WP_001181307.1;Name=WP_001181307.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AB69_RS00770;product=trehalose operon repressor TreR;protein_id=WP_001181307.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 154169 154222 . + . ID=gene-AB69_RS29585;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AB69_RS29585 NZ_JHDO01000128.1 Protein Homology CDS 154169 154222 . + 0 ID=cds-WP_001387276.1;Parent=gene-AB69_RS29585;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AB69_RS29585;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 154363 157059 . + . ID=gene-AB69_RS00765;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AB69_RS00765;old_locus_tag=AB69_4659 NZ_JHDO01000128.1 Protein Homology CDS 154363 157059 . + 0 ID=cds-WP_000471897.1;Parent=gene-AB69_RS00765;Dbxref=GenBank:WP_000471897.1;Name=WP_000471897.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AB69_RS00765;product=magnesium-translocating P-type ATPase;protein_id=WP_000471897.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 157265 157651 . - . ID=gene-AB69_RS00760;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AB69_RS00760;old_locus_tag=AB69_4660 NZ_JHDO01000128.1 Protein Homology CDS 157265 157651 . - 0 ID=cds-WP_000047538.1;Parent=gene-AB69_RS00760;Dbxref=GenBank:WP_000047538.1;Name=WP_000047538.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AB69_RS00760;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047538.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 157724 158185 . - . ID=gene-AB69_RS00755;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AB69_RS00755;old_locus_tag=AB69_4661 NZ_JHDO01000128.1 Protein Homology CDS 157724 158185 . - 0 ID=cds-WP_000148581.1;Parent=gene-AB69_RS00755;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AB69_RS00755;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 158198 159133 . - . ID=gene-AB69_RS00750;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AB69_RS00750;old_locus_tag=AB69_4662 NZ_JHDO01000128.1 Protein Homology CDS 158198 159133 . - 0 ID=cds-WP_000013046.1;Parent=gene-AB69_RS00750;Dbxref=GenBank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AB69_RS00750;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 159137 159271 . - . ID=gene-AB69_RS0125505;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AB69_RS0125505 NZ_JHDO01000128.1 Protein Homology CDS 159137 159271 . - 0 ID=cds-WP_001296693.1;Parent=gene-AB69_RS0125505;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AB69_RS0125505;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 159552 159947 . - . ID=gene-AB69_RS00745;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AB69_RS00745;old_locus_tag=AB69_4663 NZ_JHDO01000128.1 Protein Homology CDS 159552 159947 . - 0 ID=cds-WP_000230274.1;Parent=gene-AB69_RS00745;Dbxref=GenBank:WP_000230274.1;Name=WP_000230274.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AB69_RS00745;product=RidA family protein;protein_id=WP_000230274.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 160078 160791 . - . ID=gene-AB69_RS00740;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AB69_RS00740;old_locus_tag=AB69_4664 NZ_JHDO01000128.1 Protein Homology CDS 160078 160791 . - 0 ID=cds-WP_000500685.1;Parent=gene-AB69_RS00740;Dbxref=GenBank:WP_000500685.1;Name=WP_000500685.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AB69_RS00740;product=SDR family oxidoreductase;protein_id=WP_000500685.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 160862 161455 . + . ID=gene-AB69_RS00735;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AB69_RS00735;old_locus_tag=AB69_4665 NZ_JHDO01000128.1 Protein Homology CDS 160862 161455 . + 0 ID=cds-WP_000256663.1;Parent=gene-AB69_RS00735;Dbxref=GenBank:WP_000256663.1;Name=WP_000256663.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313255.2;locus_tag=AB69_RS00735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256663.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 161600 162052 . + . ID=gene-AB69_RS00730;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AB69_RS00730;old_locus_tag=AB69_4666 NZ_JHDO01000128.1 Protein Homology CDS 161600 162052 . + 0 ID=cds-WP_001336307.1;Parent=gene-AB69_RS00730;Dbxref=GenBank:WP_001336307.1;Name=WP_001336307.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AB69_RS00730;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_001336307.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 162175 163827 . + . ID=gene-AB69_RS00725;Name=AB69_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00725;old_locus_tag=AB69_4667 NZ_JHDO01000128.1 Protein Homology CDS 162175 163827 . + 0 ID=cds-WP_032230945.1;Parent=gene-AB69_RS00725;Dbxref=GenBank:WP_032230945.1;Name=WP_032230945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036417.1;locus_tag=AB69_RS00725;product=hypothetical protein;protein_id=WP_032230945.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 163900 164904 . - . ID=gene-AB69_RS00720;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AB69_RS00720;old_locus_tag=AB69_4668 NZ_JHDO01000128.1 Protein Homology CDS 163900 164904 . - 0 ID=cds-WP_000012907.1;Parent=gene-AB69_RS00720;Dbxref=GenBank:WP_000012907.1;Name=WP_000012907.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AB69_RS00720;product=ornithine carbamoyltransferase;protein_id=WP_000012907.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 165066 165482 . + . ID=gene-AB69_RS00715;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AB69_RS00715;old_locus_tag=AB69_4669 NZ_JHDO01000128.1 Protein Homology CDS 165066 165482 . + 0 ID=cds-WP_000002953.1;Parent=gene-AB69_RS00715;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AB69_RS00715;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 165528 166031 . - . ID=gene-AB69_RS00710;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AB69_RS00710;old_locus_tag=AB69_4670 NZ_JHDO01000128.1 Protein Homology CDS 165528 166031 . - 0 ID=cds-WP_001059397.1;Parent=gene-AB69_RS00710;Dbxref=GenBank:WP_001059397.1;Name=WP_001059397.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313260.2;locus_tag=AB69_RS00710;product=GNAT family N-acetyltransferase;protein_id=WP_001059397.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 166224 167420 . + . ID=gene-AB69_RS00705;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AB69_RS00705;old_locus_tag=AB69_4671 NZ_JHDO01000128.1 Protein Homology CDS 166224 167420 . + 0 ID=cds-WP_000079628.1;Parent=gene-AB69_RS00705;Dbxref=GenBank:WP_000079628.1;Name=WP_000079628.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313261.1;locus_tag=AB69_RS00705;product=YjgN family protein;protein_id=WP_000079628.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 167476 170331 . - . ID=gene-AB69_RS00700;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AB69_RS00700;old_locus_tag=AB69_4672 NZ_JHDO01000128.1 Protein Homology CDS 167476 170331 . - 0 ID=cds-WP_000416403.1;Parent=gene-AB69_RS00700;Dbxref=GenBank:WP_000416403.1;Name=WP_000416403.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AB69_RS00700;product=valine--tRNA ligase;protein_id=WP_000416403.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 170331 170774 . - . ID=gene-AB69_RS00695;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AB69_RS00695;old_locus_tag=AB69_4673 NZ_JHDO01000128.1 Protein Homology CDS 170331 170774 . - 0 ID=cds-WP_000786393.1;Parent=gene-AB69_RS00695;Dbxref=GenBank:WP_000786393.1;Name=WP_000786393.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AB69_RS00695;product=DNA polymerase III subunit chi;protein_id=WP_000786393.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 171128 172639 . - . ID=gene-AB69_RS00690;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AB69_RS00690;old_locus_tag=AB69_4674 NZ_JHDO01000128.1 Protein Homology CDS 171128 172639 . - 0 ID=cds-WP_000397144.1;Parent=gene-AB69_RS00690;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AB69_RS00690;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 172793 172843 . + . ID=gene-AB69_RS30495;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AB69_RS30495 NZ_JHDO01000128.1 Protein Homology CDS 172793 172843 . + 0 ID=cds-WP_211180521.1;Parent=gene-AB69_RS30495;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AB69_RS30495;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 172906 174006 . + . ID=gene-AB69_RS00685;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB69_RS00685;old_locus_tag=AB69_4676 NZ_JHDO01000128.1 Protein Homology CDS 172906 174006 . + 0 ID=cds-WP_000584114.1;Parent=gene-AB69_RS00685;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AB69_RS00685;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 174006 175088 . + . ID=gene-AB69_RS00680;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB69_RS00680;old_locus_tag=AB69_4677 NZ_JHDO01000128.1 Protein Homology CDS 174006 175088 . + 0 ID=cds-WP_001295681.1;Parent=gene-AB69_RS00680;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AB69_RS00680;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 175249 176751 . - . ID=gene-AB69_RS00675;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AB69_RS00675;old_locus_tag=AB69_4678 NZ_JHDO01000128.1 Protein Homology CDS 175249 176751 . - 0 ID=cds-WP_016238974.1;Parent=gene-AB69_RS00675;Dbxref=GenBank:WP_016238974.1;Name=WP_016238974.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418684.1;locus_tag=AB69_RS00675;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_016238974.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 176829 177827 . - . ID=gene-AB69_RS00670;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AB69_RS00670;old_locus_tag=AB69_4679 NZ_JHDO01000128.1 Protein Homology CDS 176829 177827 . - 0 ID=cds-WP_032230946.1;Parent=gene-AB69_RS00670;Dbxref=GenBank:WP_032230946.1;Name=WP_032230946.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AB69_RS00670;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_032230946.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 177894 179213 . - . ID=gene-AB69_RS00665;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AB69_RS00665;old_locus_tag=AB69_4680 NZ_JHDO01000128.1 Protein Homology CDS 177894 179213 . - 0 ID=cds-WP_001128347.1;Parent=gene-AB69_RS00665;Dbxref=GenBank:WP_001128347.1;Name=WP_001128347.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AB69_RS00665;product=gnt-II system L-idonate transporter;protein_id=WP_001128347.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 179276 180040 . - . ID=gene-AB69_RS00660;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AB69_RS00660;old_locus_tag=AB69_4681 NZ_JHDO01000128.1 Protein Homology CDS 179276 180040 . - 0 ID=cds-WP_000998695.1;Parent=gene-AB69_RS00660;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AB69_RS00660;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 180064 181095 . - . ID=gene-AB69_RS00655;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AB69_RS00655;old_locus_tag=AB69_4682 NZ_JHDO01000128.1 Protein Homology CDS 180064 181095 . - 0 ID=cds-WP_001197411.1;Parent=gene-AB69_RS00655;Dbxref=GenBank:WP_001197411.1;Name=WP_001197411.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AB69_RS00655;product=L-idonate 5-dehydrogenase;protein_id=WP_001197411.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 181312 181875 . + . ID=gene-AB69_RS00650;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AB69_RS00650;old_locus_tag=AB69_4683 NZ_JHDO01000128.1 Protein Homology CDS 181312 181875 . + 0 ID=cds-WP_000896738.1;Parent=gene-AB69_RS00650;Dbxref=GenBank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AB69_RS00650;product=gluconokinase;protein_id=WP_000896738.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 181879 182898 . - . ID=gene-AB69_RS00645;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AB69_RS00645;old_locus_tag=AB69_4684 NZ_JHDO01000128.1 Protein Homology CDS 181879 182898 . - 0 ID=cds-WP_001318460.1;Parent=gene-AB69_RS00645;Dbxref=GenBank:WP_001318460.1;Name=WP_001318460.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AB69_RS00645;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001318460.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 183094 183178 . + . ID=gene-AB69_RS00640;Name=AB69_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00640;old_locus_tag=AB69_4686 NZ_JHDO01000128.1 tRNAscan-SE tRNA 183094 183178 . + . ID=rna-AB69_RS00640;Parent=gene-AB69_RS00640;anticodon=(pos:183128..183130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00640;product=tRNA-Leu NZ_JHDO01000128.1 tRNAscan-SE exon 183094 183178 . + . ID=exon-AB69_RS00640-1;Parent=rna-AB69_RS00640;anticodon=(pos:183128..183130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00640;product=tRNA-Leu NZ_JHDO01000128.1 RefSeq gene 183421 184629 . + . ID=gene-AB69_RS00635;Name=AB69_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00635;old_locus_tag=AB69_4687 NZ_JHDO01000128.1 Protein Homology CDS 183421 184629 . + 0 ID=cds-WP_223362169.1;Parent=gene-AB69_RS00635;Dbxref=GenBank:WP_223362169.1;Name=WP_223362169.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AB69_RS00635;product=tyrosine-type recombinase/integrase;protein_id=WP_223362169.1;transl_table=11 NZ_JHDO01000128.1 RefSeq pseudogene 184946 186129 . - . ID=gene-AB69_RS25690;Name=AB69_RS25690;end_range=186129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS25690;partial=true;pseudo=true NZ_JHDO01000128.1 Protein Homology CDS 184946 186129 . - 0 ID=cds-AB69_RS25690;Parent=gene-AB69_RS25690;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009244,GO:1900727,GO:0016776;end_range=186129,.;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AB69_RS25690;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JHDO01000128.1 RefSeq pseudogene 186713 186942 . + . ID=gene-AB69_RS28140;Name=AB69_RS28140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS28140;partial=true;pseudo=true;start_range=.,186713 NZ_JHDO01000128.1 Protein Homology CDS 186713 186942 . + 0 ID=cds-AB69_RS28140;Parent=gene-AB69_RS28140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=AB69_RS28140;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,186713;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 187285 187428 . + . ID=gene-AB69_RS00620;Name=AB69_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00620;old_locus_tag=AB69_4691 NZ_JHDO01000128.1 GeneMarkS-2+ CDS 187285 187428 . + 0 ID=cds-WP_000050905.1;Parent=gene-AB69_RS00620;Dbxref=GenBank:WP_000050905.1;Name=WP_000050905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB69_RS00620;product=hypothetical protein;protein_id=WP_000050905.1;transl_table=11 NZ_JHDO01000128.1 RefSeq gene 187456 188597 . - . ID=gene-AB69_RS28145;Name=AB69_RS28145;end_range=188597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28145;old_locus_tag=AB69_4692;partial=true NZ_JHDO01000128.1 Protein Homology CDS 187456 188597 . - 2 ID=cds-WP_032235697.1-2;Parent=gene-AB69_RS28145;Dbxref=GenBank:WP_032235697.1;Name=WP_032235697.1;Ontology_term=GO:0006313,GO:0004803;end_range=188597,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418698.1;locus_tag=AB69_RS28145;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032235697.1;transl_table=11 ##sequence-region NZ_JHDO01000129.1 1 3911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000129.1 RefSeq region 1 3911 . + . ID=NZ_JHDO01000129.1:1..3911;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000129.1 RefSeq gene 1 282 . - . ID=gene-AB69_RS28150;Name=AB69_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS28150;old_locus_tag=AB69_4693;partial=true;start_range=.,1 NZ_JHDO01000129.1 Protein Homology CDS 1 282 . - 0 ID=cds-WP_024171887.1;Parent=gene-AB69_RS28150;Dbxref=GenBank:WP_024171887.1;Name=WP_024171887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AB69_RS28150;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_024171887.1;start_range=.,1;transl_table=11 NZ_JHDO01000129.1 RefSeq pseudogene 347 595 . - . ID=gene-AB69_RS00610;Name=AB69_RS00610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB69_RS00610;old_locus_tag=AB69_4694;partial=true;pseudo=true;start_range=.,347 NZ_JHDO01000129.1 Protein Homology CDS 347 595 . - 0 ID=cds-AB69_RS00610;Parent=gene-AB69_RS00610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=AB69_RS00610;partial=true;product=transposase;pseudo=true;start_range=.,347;transl_table=11 NZ_JHDO01000129.1 RefSeq gene 1348 3339 . + . ID=gene-AB69_RS00605;Name=AB69_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00605;old_locus_tag=AB69_4695 NZ_JHDO01000129.1 Protein Homology CDS 1348 3339 . + 0 ID=cds-WP_032231309.1;Parent=gene-AB69_RS00605;Dbxref=GenBank:WP_032231309.1;Name=WP_032231309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118599.1;locus_tag=AB69_RS00605;product=ATP-binding protein;protein_id=WP_032231309.1;transl_table=11 NZ_JHDO01000129.1 RefSeq gene 3667 3911 . + . ID=gene-AB69_RS00600;Name=AB69_RS00600;end_range=3911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00600;old_locus_tag=AB69_4696;partial=true NZ_JHDO01000129.1 Protein Homology CDS 3667 3911 . + 0 ID=cds-WP_000567704.1;Parent=gene-AB69_RS00600;Dbxref=GenBank:WP_000567704.1;Name=WP_000567704.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3911,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB69_RS00600;partial=true;product=transposase;protein_id=WP_000567704.1;transl_table=11 ##sequence-region NZ_JHDO01000130.1 1 2439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000130.1 RefSeq region 1 2439 . + . ID=NZ_JHDO01000130.1:1..2439;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000130.1 RefSeq pseudogene 1 350 . + . ID=gene-AB69_RS28160;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=pseudogene;locus_tag=AB69_RS28160;old_locus_tag=AB69_4697;partial=true;pseudo=true;start_range=.,1 NZ_JHDO01000130.1 Protein Homology CDS 1 350 . + 2 ID=cds-AB69_RS28160;Parent=gene-AB69_RS28160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB69_RS28160;partial=true;product=type 1 fimbria switch DNA invertase FimB;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDO01000130.1 RefSeq gene 828 1424 . + . ID=gene-AB69_RS00590;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB69_RS00590;old_locus_tag=AB69_4698 NZ_JHDO01000130.1 Protein Homology CDS 828 1424 . + 0 ID=cds-WP_000044711.1-3;Parent=gene-AB69_RS00590;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB69_RS00590;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JHDO01000130.1 RefSeq gene 1907 2439 . + . ID=gene-AB69_RS00585;Name=fimA;end_range=2439,.;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB69_RS00585;old_locus_tag=AB69_4699;partial=true NZ_JHDO01000130.1 Protein Homology CDS 1907 2439 . + 0 ID=cds-WP_032199086.1;Parent=gene-AB69_RS00585;Dbxref=GenBank:WP_032199086.1;Name=WP_032199086.1;Ontology_term=GO:0007155,GO:0009289;end_range=2439,.;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418734.1;locus_tag=AB69_RS00585;partial=true;product=type 1 fimbrial major subunit FimA;protein_id=WP_032199086.1;transl_table=11 ##sequence-region NZ_JHDO01000131.1 1 76185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000131.1 RefSeq region 1 76185 . + . ID=NZ_JHDO01000131.1:1..76185;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000131.1 RefSeq gene 3 506 . + . ID=gene-AB69_RS00580;Name=fimG;gbkey=Gene;gene=fimG;gene_biotype=protein_coding;locus_tag=AB69_RS00580;old_locus_tag=AB69_4700 NZ_JHDO01000131.1 Protein Homology CDS 3 506 . + 0 ID=cds-WP_000870592.1;Parent=gene-AB69_RS00580;Dbxref=GenBank:WP_000870592.1;Name=WP_000870592.1;gbkey=CDS;gene=fimG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AB69_RS00580;product=type 1 fimbria minor subunit FimG;protein_id=WP_000870592.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 526 1428 . + . ID=gene-AB69_RS00575;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB69_RS00575;old_locus_tag=AB69_4701 NZ_JHDO01000131.1 Protein Homology CDS 526 1428 . + 0 ID=cds-WP_000832247.1-3;Parent=gene-AB69_RS00575;Dbxref=GenBank:WP_000832247.1;Name=WP_000832247.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418740.1;locus_tag=AB69_RS00575;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832247.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 1671 3014 . - . ID=gene-AB69_RS00570;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AB69_RS00570;old_locus_tag=AB69_4702 NZ_JHDO01000131.1 Protein Homology CDS 1671 3014 . - 0 ID=cds-WP_032231608.1;Parent=gene-AB69_RS00570;Dbxref=GenBank:WP_032231608.1;Name=WP_032231608.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AB69_RS00570;product=gluconate permease GntP;protein_id=WP_032231608.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 3354 4538 . + . ID=gene-AB69_RS00565;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AB69_RS00565;old_locus_tag=AB69_4703 NZ_JHDO01000131.1 Protein Homology CDS 3354 4538 . + 0 ID=cds-WP_000438562.1;Parent=gene-AB69_RS00565;Dbxref=GenBank:WP_000438562.1;Name=WP_000438562.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418742.1;locus_tag=AB69_RS00565;product=mannonate dehydratase;protein_id=WP_000438562.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 4619 6079 . + . ID=gene-AB69_RS00560;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AB69_RS00560;old_locus_tag=AB69_4704 NZ_JHDO01000131.1 Protein Homology CDS 4619 6079 . + 0 ID=cds-WP_000208176.1;Parent=gene-AB69_RS00560;Dbxref=GenBank:WP_000208176.1;Name=WP_000208176.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418743.1;locus_tag=AB69_RS00560;product=fructuronate reductase;protein_id=WP_000208176.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 6294 7067 . + . ID=gene-AB69_RS00555;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AB69_RS00555;old_locus_tag=AB69_4705 NZ_JHDO01000131.1 Protein Homology CDS 6294 7067 . + 0 ID=cds-WP_000833679.1;Parent=gene-AB69_RS00555;Dbxref=GenBank:WP_000833679.1;Name=WP_000833679.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=AB69_RS00555;product=Uxu operon transcriptional regulator;protein_id=WP_000833679.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 7208 8038 . - . ID=gene-AB69_RS00550;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AB69_RS00550;old_locus_tag=AB69_4706 NZ_JHDO01000131.1 Protein Homology CDS 7208 8038 . - 0 ID=cds-WP_000062552.1;Parent=gene-AB69_RS00550;Dbxref=GenBank:WP_000062552.1;Name=WP_000062552.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418745.3;locus_tag=AB69_RS00550;product=YjfZ/YjiC family protein;protein_id=WP_000062552.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 8325 8393 . + . ID=gene-AB69_RS30920;Name=AB69_RS30920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30920 NZ_JHDO01000131.1 Protein Homology CDS 8325 8393 . + 0 ID=cds-WP_418267939.1;Parent=gene-AB69_RS30920;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AB69_RS30920;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 8372 8515 . + . ID=gene-AB69_RS30660;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AB69_RS30660;old_locus_tag=AB69_4707 NZ_JHDO01000131.1 Protein Homology CDS 8372 8515 . + 0 ID=cds-WP_001301448.1;Parent=gene-AB69_RS30660;Dbxref=GenBank:WP_001301448.1;Name=WP_001301448.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AB69_RS30660;product=protein YtiD;protein_id=WP_001301448.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 8631 8714 . + . ID=gene-AB69_RS29905;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AB69_RS29905 NZ_JHDO01000131.1 Protein Homology CDS 8631 8714 . + 0 ID=cds-WP_120795393.1;Parent=gene-AB69_RS29905;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AB69_RS29905;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 8711 9103 . + . ID=gene-AB69_RS00540;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AB69_RS00540;old_locus_tag=AB69_4709 NZ_JHDO01000131.1 Protein Homology CDS 8711 9103 . + 0 ID=cds-WP_001309187.1;Parent=gene-AB69_RS00540;Dbxref=GenBank:WP_001309187.1;Name=WP_001309187.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AB69_RS00540;product=anti-adapter protein IraD;protein_id=WP_001309187.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 9096 10007 . - . ID=gene-AB69_RS00535;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AB69_RS00535;old_locus_tag=AB69_4710 NZ_JHDO01000131.1 Protein Homology CDS 9096 10007 . - 0 ID=cds-WP_000340740.1;Parent=gene-AB69_RS00535;Dbxref=GenBank:WP_000340740.1;Name=WP_000340740.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AB69_RS00535;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340740.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 10072 11244 . - . ID=gene-AB69_RS00530;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AB69_RS00530;old_locus_tag=AB69_4711 NZ_JHDO01000131.1 Protein Homology CDS 10072 11244 . - 0 ID=cds-WP_000568432.1;Parent=gene-AB69_RS00530;Dbxref=GenBank:WP_000568432.1;Name=WP_000568432.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418748.1;locus_tag=AB69_RS00530;product=beta-aspartyl-peptidase;protein_id=WP_000568432.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 11257 11718 . - . ID=gene-AB69_RS00525;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AB69_RS00525;old_locus_tag=AB69_4712 NZ_JHDO01000131.1 Protein Homology CDS 11257 11718 . - 0 ID=cds-WP_000211971.1;Parent=gene-AB69_RS00525;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AB69_RS00525;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 11715 12398 . - . ID=gene-AB69_RS00520;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AB69_RS00520;old_locus_tag=AB69_4713 NZ_JHDO01000131.1 Protein Homology CDS 11715 12398 . - 0 ID=cds-WP_001295597.1;Parent=gene-AB69_RS00520;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AB69_RS00520;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 12648 13202 . + . ID=gene-AB69_RS00515;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AB69_RS00515;old_locus_tag=AB69_4715 NZ_JHDO01000131.1 Protein Homology CDS 12648 13202 . + 0 ID=cds-WP_001151855.1;Parent=gene-AB69_RS00515;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AB69_RS00515;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 13215 14393 . - . ID=gene-AB69_RS00510;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AB69_RS00510;old_locus_tag=AB69_4716 NZ_JHDO01000131.1 Protein Homology CDS 13215 14393 . - 0 ID=cds-WP_001141220.1;Parent=gene-AB69_RS00510;Dbxref=GenBank:WP_001141220.1;Name=WP_001141220.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AB69_RS00510;product=MFS transporter;protein_id=WP_001141220.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 14461 15321 . - . ID=gene-AB69_RS00505;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AB69_RS00505;old_locus_tag=AB69_4717 NZ_JHDO01000131.1 Protein Homology CDS 14461 15321 . - 0 ID=cds-WP_001318795.1;Parent=gene-AB69_RS00505;Dbxref=GenBank:WP_001318795.1;Name=WP_001318795.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AB69_RS00505;product=SdiA-regulated domain-containing protein;protein_id=WP_001318795.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 15386 15643 . - . ID=gene-AB69_RS00500;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AB69_RS00500;old_locus_tag=AB69_4718 NZ_JHDO01000131.1 Protein Homology CDS 15386 15643 . - 0 ID=cds-WP_000657675.1;Parent=gene-AB69_RS00500;Dbxref=GenBank:WP_000657675.1;Name=WP_000657675.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AB69_RS00500;product=DUF3343 domain-containing protein;protein_id=WP_000657675.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 15640 16407 . - . ID=gene-AB69_RS00495;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AB69_RS00495;old_locus_tag=AB69_4719 NZ_JHDO01000131.1 Protein Homology CDS 15640 16407 . - 0 ID=cds-WP_000331745.1;Parent=gene-AB69_RS00495;Dbxref=GenBank:WP_000331745.1;Name=WP_000331745.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418754.2;locus_tag=AB69_RS00495;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000331745.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 16417 17568 . - . ID=gene-AB69_RS00490;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AB69_RS00490;old_locus_tag=AB69_4720 NZ_JHDO01000131.1 Protein Homology CDS 16417 17568 . - 0 ID=cds-WP_001300012.1;Parent=gene-AB69_RS00490;Dbxref=GenBank:WP_001300012.1;Name=WP_001300012.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AB69_RS00490;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001300012.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 17684 18964 . - . ID=gene-AB69_RS00485;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AB69_RS00485;old_locus_tag=AB69_4721 NZ_JHDO01000131.1 Protein Homology CDS 17684 18964 . - 0 ID=cds-WP_001037419.1;Parent=gene-AB69_RS00485;Dbxref=GenBank:WP_001037419.1;Name=WP_001037419.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AB69_RS00485;product=DUF445 domain-containing protein;protein_id=WP_001037419.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 19005 20237 . - . ID=gene-AB69_RS00480;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AB69_RS00480;old_locus_tag=AB69_4722 NZ_JHDO01000131.1 Protein Homology CDS 19005 20237 . - 0 ID=cds-WP_001137036.1;Parent=gene-AB69_RS00480;Dbxref=GenBank:WP_001137036.1;Name=WP_001137036.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418757.1;locus_tag=AB69_RS00480;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137036.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 20716 21636 . + . ID=gene-AB69_RS00475;Name=AB69_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00475;old_locus_tag=AB69_4724 NZ_JHDO01000131.1 Protein Homology CDS 20716 21636 . + 0 ID=cds-WP_000181202.1;Parent=gene-AB69_RS00475;Dbxref=GenBank:WP_000181202.1;Name=WP_000181202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=AB69_RS00475;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000181202.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 21880 23292 . - . ID=gene-AB69_RS00470;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=AB69_RS00470;old_locus_tag=AB69_4725 NZ_JHDO01000131.1 Protein Homology CDS 21880 23292 . - 0 ID=cds-WP_000199300.1;Parent=gene-AB69_RS00470;Dbxref=GenBank:WP_000199300.1;Name=WP_000199300.1;Ontology_term=GO:0030170;gbkey=CDS;gene=yjiR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=AB69_RS00470;product=PLP-dependent aminotransferase family protein;protein_id=WP_000199300.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 23469 23633 . + . ID=gene-AB69_RS00465;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=AB69_RS00465;old_locus_tag=AB69_4726 NZ_JHDO01000131.1 Protein Homology CDS 23469 23633 . + 0 ID=cds-WP_000397910.1;Parent=gene-AB69_RS00465;Dbxref=GenBank:WP_000397910.1;Name=WP_000397910.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=AB69_RS00465;product=DUF1127 domain-containing protein;protein_id=WP_000397910.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 24083 27202 . + . ID=gene-AB69_RS30925;Name=AB69_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS30925 NZ_JHDO01000131.1 Protein Homology CDS 24083 27202 . + 0 ID=cds-WP_050429154.1;Parent=gene-AB69_RS30925;Dbxref=GenBank:WP_050429154.1;Name=WP_050429154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666002.1;locus_tag=AB69_RS30925;product=DUF1998 domain-containing protein;protein_id=WP_050429154.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 27259 28305 . - . ID=gene-AB69_RS00455;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=AB69_RS00455;old_locus_tag=AB69_4728 NZ_JHDO01000131.1 Protein Homology CDS 27259 28305 . - 0 ID=cds-WP_001318550.1;Parent=gene-AB69_RS00455;Dbxref=GenBank:WP_001318550.1;Name=WP_001318550.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418765.1;locus_tag=AB69_RS00455;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_001318550.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 28305 29684 . - . ID=gene-AB69_RS00450;Name=mcrB;gbkey=Gene;gene=mcrB;gene_biotype=protein_coding;locus_tag=AB69_RS00450;old_locus_tag=AB69_4729 NZ_JHDO01000131.1 Protein Homology CDS 28305 29684 . - 0 ID=cds-WP_000443948.1;Parent=gene-AB69_RS00450;Dbxref=GenBank:WP_000443948.1;Name=WP_000443948.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;gene=mcrB;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418766.4;locus_tag=AB69_RS00450;product=5-methylcytosine-specific restriction endonuclease subunit McrB;protein_id=WP_000443948.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 29846 30187 . - . ID=gene-AB69_RS00445;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=AB69_RS00445;old_locus_tag=AB69_4730 NZ_JHDO01000131.1 Protein Homology CDS 29846 30187 . - 0 ID=cds-WP_000131234.1;Parent=gene-AB69_RS00445;Dbxref=GenBank:WP_000131234.1;Name=WP_000131234.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418767.4;locus_tag=AB69_RS00445;product=endoribonuclease SymE;protein_id=WP_000131234.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 30415 31839 . - . ID=gene-AB69_RS00440;Name=AB69_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00440;old_locus_tag=AB69_4732 NZ_JHDO01000131.1 Protein Homology CDS 30415 31839 . - 0 ID=cds-WP_000009567.1;Parent=gene-AB69_RS00440;Dbxref=GenBank:WP_000009567.1;Name=WP_000009567.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009565.1;locus_tag=AB69_RS00440;product=restriction endonuclease subunit S;protein_id=WP_000009567.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 31836 33425 . - . ID=gene-AB69_RS00435;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=AB69_RS00435;old_locus_tag=AB69_4733 NZ_JHDO01000131.1 Protein Homology CDS 31836 33425 . - 0 ID=cds-WP_001063206.1;Parent=gene-AB69_RS00435;Dbxref=GenBank:WP_001063206.1;Name=WP_001063206.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418769.1;locus_tag=AB69_RS00435;product=type I restriction-modification system methyltransferase;protein_id=WP_001063206.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 33626 37138 . - . ID=gene-AB69_RS00430;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=AB69_RS00430;old_locus_tag=AB69_4734 NZ_JHDO01000131.1 Protein Homology CDS 33626 37138 . - 0 ID=cds-WP_000981380.1;Parent=gene-AB69_RS00430;Dbxref=GenBank:WP_000981380.1;Name=WP_000981380.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418770.2;locus_tag=AB69_RS00430;product=type I restriction-modification system endonuclease;protein_id=WP_000981380.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 37326 38240 . + . ID=gene-AB69_RS00425;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;locus_tag=AB69_RS00425;old_locus_tag=AB69_4735 NZ_JHDO01000131.1 Protein Homology CDS 37326 38240 . + 0 ID=cds-WP_000217934.1;Parent=gene-AB69_RS00425;Dbxref=GenBank:WP_000217934.1;Name=WP_000217934.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;gene=mrr;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418771.1;locus_tag=AB69_RS00425;product=adenine/cytosine-specific restriction endonuclease Mrr;protein_id=WP_000217934.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 38286 39242 . - . ID=gene-AB69_RS00420;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AB69_RS00420;old_locus_tag=AB69_4736 NZ_JHDO01000131.1 Protein Homology CDS 38286 39242 . - 0 ID=cds-WP_032231611.1;Parent=gene-AB69_RS00420;Dbxref=GenBank:WP_032231611.1;Name=WP_032231611.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AB69_RS00420;product=GTPase;protein_id=WP_032231611.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 39253 39456 . - . ID=gene-AB69_RS00415;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AB69_RS00415;old_locus_tag=AB69_4737 NZ_JHDO01000131.1 Protein Homology CDS 39253 39456 . - 0 ID=cds-WP_000467859.1;Parent=gene-AB69_RS00415;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AB69_RS00415;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 39506 41656 . - . ID=gene-AB69_RS00410;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AB69_RS00410;old_locus_tag=AB69_4738 NZ_JHDO01000131.1 Protein Homology CDS 39506 41656 . - 0 ID=cds-WP_001298933.1;Parent=gene-AB69_RS00410;Dbxref=GenBank:WP_001298933.1;Name=WP_001298933.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313340.2;locus_tag=AB69_RS00410;product=pyruvate/proton symporter BtsT;protein_id=WP_001298933.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 42049 42561 . - . ID=gene-AB69_RS00405;Name=AB69_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00405;old_locus_tag=AB69_4739 NZ_JHDO01000131.1 Protein Homology CDS 42049 42561 . - 0 ID=cds-WP_001175455.1;Parent=gene-AB69_RS00405;Dbxref=GenBank:WP_001175455.1;Name=WP_001175455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710082.1;locus_tag=AB69_RS00405;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001175455.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 42579 44141 . - . ID=gene-AB69_RS00400;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=AB69_RS00400;old_locus_tag=AB69_4740 NZ_JHDO01000131.1 Protein Homology CDS 42579 44141 . - 0 ID=cds-WP_000801472.1;Parent=gene-AB69_RS00400;Dbxref=GenBank:WP_000801472.1;Name=WP_000801472.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=AB69_RS00400;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801472.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 44392 45282 . - . ID=gene-AB69_RS00395;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=AB69_RS00395;old_locus_tag=AB69_4741 NZ_JHDO01000131.1 Protein Homology CDS 44392 45282 . - 0 ID=cds-WP_000332891.1;Parent=gene-AB69_RS00395;Dbxref=GenBank:WP_000332891.1;Name=WP_000332891.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801836.1;locus_tag=AB69_RS00395;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000332891.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 45292 46668 . - . ID=gene-AB69_RS00390;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=AB69_RS00390;old_locus_tag=AB69_4742 NZ_JHDO01000131.1 Protein Homology CDS 45292 46668 . - 0 ID=cds-WP_001285764.1;Parent=gene-AB69_RS00390;Dbxref=GenBank:WP_001285764.1;Name=WP_001285764.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=AB69_RS00390;product=4-hydroxyphenylacetate permease;protein_id=WP_001285764.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 46792 47580 . - . ID=gene-AB69_RS00385;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=AB69_RS00385;old_locus_tag=AB69_4743 NZ_JHDO01000131.1 Protein Homology CDS 46792 47580 . - 0 ID=cds-WP_000431701.1;Parent=gene-AB69_RS00385;Dbxref=GenBank:WP_000431701.1;Name=WP_000431701.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966060.1;locus_tag=AB69_RS00385;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000431701.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 47591 48394 . - . ID=gene-AB69_RS00380;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=AB69_RS00380;old_locus_tag=AB69_4744 NZ_JHDO01000131.1 Protein Homology CDS 47591 48394 . - 0 ID=cds-WP_000459750.1;Parent=gene-AB69_RS00380;Dbxref=GenBank:WP_000459750.1;Name=WP_000459750.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710089.2;locus_tag=AB69_RS00380;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000459750.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 48462 48842 . - . ID=gene-AB69_RS00375;Name=AB69_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00375;old_locus_tag=AB69_4745 NZ_JHDO01000131.1 Protein Homology CDS 48462 48842 . - 0 ID=cds-WP_001119872.1;Parent=gene-AB69_RS00375;Dbxref=GenBank:WP_001119872.1;Name=WP_001119872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710090.1;locus_tag=AB69_RS00375;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119872.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 48852 49703 . - . ID=gene-AB69_RS00370;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=AB69_RS00370;old_locus_tag=AB69_4746 NZ_JHDO01000131.1 Protein Homology CDS 48852 49703 . - 0 ID=cds-WP_000516990.1;Parent=gene-AB69_RS00370;Dbxref=GenBank:WP_000516990.1;Name=WP_000516990.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710091.1;locus_tag=AB69_RS00370;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516990.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 49705 51171 . - . ID=gene-AB69_RS00365;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=AB69_RS00365;old_locus_tag=AB69_4747 NZ_JHDO01000131.1 Protein Homology CDS 49705 51171 . - 0 ID=cds-WP_000757515.1;Parent=gene-AB69_RS00365;Dbxref=GenBank:WP_000757515.1;Name=WP_000757515.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=AB69_RS00365;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000757515.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 51168 52457 . - . ID=gene-AB69_RS00360;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=AB69_RS00360;old_locus_tag=AB69_4748 NZ_JHDO01000131.1 Protein Homology CDS 51168 52457 . - 0 ID=cds-WP_000679064.1;Parent=gene-AB69_RS00360;Dbxref=GenBank:WP_000679064.1;Name=WP_000679064.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710093.2;locus_tag=AB69_RS00360;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679064.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 52729 53175 . + . ID=gene-AB69_RS00355;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=AB69_RS00355;old_locus_tag=AB69_4750 NZ_JHDO01000131.1 Protein Homology CDS 52729 53175 . + 0 ID=cds-WP_000543916.1;Parent=gene-AB69_RS00355;Dbxref=GenBank:WP_000543916.1;Name=WP_000543916.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710094.1;locus_tag=AB69_RS00355;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543916.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 53294 54949 . + . ID=gene-AB69_RS00350;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AB69_RS00350;old_locus_tag=AB69_4751 NZ_JHDO01000131.1 Protein Homology CDS 53294 54949 . + 0 ID=cds-WP_000919572.1;Parent=gene-AB69_RS00350;Dbxref=GenBank:WP_000919572.1;Name=WP_000919572.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418775.1;locus_tag=AB69_RS00350;product=methyl-accepting chemotaxis protein;protein_id=WP_000919572.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 54998 56359 . - . ID=gene-AB69_RS00345;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=AB69_RS00345;old_locus_tag=AB69_4752 NZ_JHDO01000131.1 Protein Homology CDS 54998 56359 . - 0 ID=cds-WP_000410113.1;Parent=gene-AB69_RS00345;Dbxref=GenBank:WP_000410113.1;Name=WP_000410113.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418776.1;locus_tag=AB69_RS00345;product=MFS transporter;protein_id=WP_000410113.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 56574 57488 . - . ID=gene-AB69_RS00340;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=AB69_RS00340;old_locus_tag=AB69_4753 NZ_JHDO01000131.1 Protein Homology CDS 56574 57488 . - 0 ID=cds-WP_000091570.1;Parent=gene-AB69_RS00340;Dbxref=GenBank:WP_000091570.1;Name=WP_000091570.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026290.1;locus_tag=AB69_RS00340;product=GntR family transcriptional regulator;protein_id=WP_000091570.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 57627 58649 . + . ID=gene-AB69_RS00335;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AB69_RS00335;old_locus_tag=AB69_4754 NZ_JHDO01000131.1 Protein Homology CDS 57627 58649 . + 0 ID=cds-WP_000106030.1;Parent=gene-AB69_RS00335;Dbxref=GenBank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AB69_RS00335;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 58787 61078 . - . ID=gene-AB69_RS00330;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AB69_RS00330;old_locus_tag=AB69_4755 NZ_JHDO01000131.1 Protein Homology CDS 58787 61078 . - 0 ID=cds-WP_001292679.1;Parent=gene-AB69_RS00330;Dbxref=GenBank:WP_001292679.1;Name=WP_001292679.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AB69_RS00330;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292679.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 61332 61826 . - . ID=gene-AB69_RS00325;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AB69_RS00325;old_locus_tag=AB69_4756 NZ_JHDO01000131.1 Protein Homology CDS 61332 61826 . - 0 ID=cds-WP_001308243.1;Parent=gene-AB69_RS00325;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AB69_RS00325;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 61875 62612 . - . ID=gene-AB69_RS00320;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AB69_RS00320;old_locus_tag=AB69_4757 NZ_JHDO01000131.1 Protein Homology CDS 61875 62612 . - 0 ID=cds-WP_000799911.1;Parent=gene-AB69_RS00320;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AB69_RS00320;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 62615 63154 . - . ID=gene-AB69_RS00315;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AB69_RS00315;old_locus_tag=AB69_4758 NZ_JHDO01000131.1 Protein Homology CDS 62615 63154 . - 0 ID=cds-WP_000098818.1;Parent=gene-AB69_RS00315;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AB69_RS00315;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 63261 63734 . - . ID=gene-AB69_RS00310;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AB69_RS00310;old_locus_tag=AB69_4759 NZ_JHDO01000131.1 Protein Homology CDS 63261 63734 . - 0 ID=cds-WP_000538191.1;Parent=gene-AB69_RS00310;Dbxref=GenBank:WP_000538191.1;Name=WP_000538191.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AB69_RS00310;product=threonine/serine exporter;protein_id=WP_000538191.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 63725 64495 . - . ID=gene-AB69_RS00305;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AB69_RS00305;old_locus_tag=AB69_4760 NZ_JHDO01000131.1 Protein Homology CDS 63725 64495 . - 0 ID=cds-WP_001338213.1;Parent=gene-AB69_RS00305;Dbxref=GenBank:WP_001338213.1;Name=WP_001338213.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AB69_RS00305;product=threonine/serine ThrE exporter family protein;protein_id=WP_001338213.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 65114 65839 . + . ID=gene-AB69_RS00300;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=AB69_RS00300;old_locus_tag=AB69_4761 NZ_JHDO01000131.1 Protein Homology CDS 65114 65839 . + 0 ID=cds-WP_000936635.1;Parent=gene-AB69_RS00300;Dbxref=GenBank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AB69_RS00300;product=helix-turn-helix domain-containing protein;protein_id=WP_000936635.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 65797 66474 . + . ID=gene-AB69_RS00295;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AB69_RS00295;old_locus_tag=AB69_4762 NZ_JHDO01000131.1 Protein Homology CDS 65797 66474 . + 0 ID=cds-WP_001301727.1;Parent=gene-AB69_RS00295;Dbxref=GenBank:WP_001301727.1;Name=WP_001301727.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AB69_RS00295;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001301727.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 66512 67300 . - . ID=gene-AB69_RS00290;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AB69_RS00290;old_locus_tag=AB69_4763 NZ_JHDO01000131.1 Protein Homology CDS 66512 67300 . - 0 ID=cds-WP_000331618.1;Parent=gene-AB69_RS00290;Dbxref=GenBank:WP_000331618.1;Name=WP_000331618.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418787.1;locus_tag=AB69_RS00290;product=siderophore-iron reductase FhuF;protein_id=WP_000331618.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 67441 67677 . + . ID=gene-AB69_RS00285;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=AB69_RS00285;old_locus_tag=AB69_4764 NZ_JHDO01000131.1 Protein Homology CDS 67441 67677 . + 0 ID=cds-WP_001393508.1;Parent=gene-AB69_RS00285;Dbxref=GenBank:WP_001393508.1;Name=WP_001393508.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588478.1;locus_tag=AB69_RS00285;product=DUF1435 domain-containing protein;protein_id=WP_001393508.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 67716 67802 . - . ID=gene-AB69_RS00280;Name=AB69_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00280;old_locus_tag=AB69_4765 NZ_JHDO01000131.1 tRNAscan-SE tRNA 67716 67802 . - . ID=rna-AB69_RS00280;Parent=gene-AB69_RS00280;anticodon=(pos:complement(67766..67768));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00280;product=tRNA-Leu NZ_JHDO01000131.1 tRNAscan-SE exon 67716 67802 . - . ID=exon-AB69_RS00280-1;Parent=rna-AB69_RS00280;anticodon=(pos:complement(67766..67768));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00280;product=tRNA-Leu NZ_JHDO01000131.1 RefSeq gene 67837 67923 . - . ID=gene-AB69_RS00275;Name=AB69_RS00275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00275;old_locus_tag=AB69_4766 NZ_JHDO01000131.1 tRNAscan-SE tRNA 67837 67923 . - . ID=rna-AB69_RS00275;Parent=gene-AB69_RS00275;anticodon=(pos:complement(67887..67889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00275;product=tRNA-Leu NZ_JHDO01000131.1 tRNAscan-SE exon 67837 67923 . - . ID=exon-AB69_RS00275-1;Parent=rna-AB69_RS00275;anticodon=(pos:complement(67887..67889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00275;product=tRNA-Leu NZ_JHDO01000131.1 RefSeq gene 67952 68038 . - . ID=gene-AB69_RS00270;Name=AB69_RS00270;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00270;old_locus_tag=AB69_4767 NZ_JHDO01000131.1 tRNAscan-SE tRNA 67952 68038 . - . ID=rna-AB69_RS00270;Parent=gene-AB69_RS00270;anticodon=(pos:complement(68002..68004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00270;product=tRNA-Leu NZ_JHDO01000131.1 tRNAscan-SE exon 67952 68038 . - . ID=exon-AB69_RS00270-1;Parent=rna-AB69_RS00270;anticodon=(pos:complement(68002..68004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00270;product=tRNA-Leu NZ_JHDO01000131.1 RefSeq gene 68073 68159 . - . ID=gene-AB69_RS00265;Name=AB69_RS00265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00265;old_locus_tag=AB69_4768 NZ_JHDO01000131.1 tRNAscan-SE tRNA 68073 68159 . - . ID=rna-AB69_RS00265;Parent=gene-AB69_RS00265;anticodon=(pos:complement(68123..68125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00265;product=tRNA-Leu NZ_JHDO01000131.1 tRNAscan-SE exon 68073 68159 . - . ID=exon-AB69_RS00265-1;Parent=rna-AB69_RS00265;anticodon=(pos:complement(68123..68125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00265;product=tRNA-Leu NZ_JHDO01000131.1 RefSeq gene 68188 68274 . - . ID=gene-AB69_RS00260;Name=AB69_RS00260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB69_RS00260;old_locus_tag=AB69_4769 NZ_JHDO01000131.1 tRNAscan-SE tRNA 68188 68274 . - . ID=rna-AB69_RS00260;Parent=gene-AB69_RS00260;anticodon=(pos:complement(68238..68240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00260;product=tRNA-Leu NZ_JHDO01000131.1 tRNAscan-SE exon 68188 68274 . - . ID=exon-AB69_RS00260-1;Parent=rna-AB69_RS00260;anticodon=(pos:complement(68238..68240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB69_RS00260;product=tRNA-Leu NZ_JHDO01000131.1 RefSeq gene 68542 69573 . - . ID=gene-AB69_RS00255;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AB69_RS00255;old_locus_tag=AB69_4770 NZ_JHDO01000131.1 Protein Homology CDS 68542 69573 . - 0 ID=cds-WP_001272330.1;Parent=gene-AB69_RS00255;Dbxref=GenBank:WP_001272330.1;Name=WP_001272330.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418788.1;locus_tag=AB69_RS00255;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272330.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 69676 70089 . + . ID=gene-AB69_RS00250;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AB69_RS00250;old_locus_tag=AB69_4771 NZ_JHDO01000131.1 Protein Homology CDS 69676 70089 . + 0 ID=cds-WP_000204012.1;Parent=gene-AB69_RS00250;Dbxref=GenBank:WP_000204012.1;Name=WP_000204012.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418789.1;locus_tag=AB69_RS00250;product=DNA polymerase III subunit psi;protein_id=WP_000204012.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 70058 70504 . + . ID=gene-AB69_RS00245;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AB69_RS00245;old_locus_tag=AB69_4772 NZ_JHDO01000131.1 Protein Homology CDS 70058 70504 . + 0 ID=cds-WP_001092461.1;Parent=gene-AB69_RS00245;Dbxref=GenBank:WP_001092461.1;Name=WP_001092461.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AB69_RS00245;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 70519 71196 . + . ID=gene-AB69_RS00240;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AB69_RS00240;old_locus_tag=AB69_4773 NZ_JHDO01000131.1 Protein Homology CDS 70519 71196 . + 0 ID=cds-WP_000870710.1;Parent=gene-AB69_RS00240;Dbxref=GenBank:WP_000870710.1;Name=WP_000870710.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=AB69_RS00240;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870710.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 71287 72876 . + . ID=gene-AB69_RS00235;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AB69_RS00235;old_locus_tag=AB69_4774 NZ_JHDO01000131.1 Protein Homology CDS 71287 72876 . + 0 ID=cds-WP_000175940.1;Parent=gene-AB69_RS00235;Dbxref=GenBank:WP_000175940.1;Name=WP_000175940.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AB69_RS00235;product=peptide chain release factor 3;protein_id=WP_000175940.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 73269 73874 . + . ID=gene-AB69_RS00230;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AB69_RS00230;old_locus_tag=AB69_4775 NZ_JHDO01000131.1 Protein Homology CDS 73269 73874 . + 0 ID=cds-WP_001295748.1;Parent=gene-AB69_RS00230;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AB69_RS00230;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 74001 74162 . + . ID=gene-AB69_RS00225;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AB69_RS00225;old_locus_tag=AB69_4776 NZ_JHDO01000131.1 Protein Homology CDS 74001 74162 . + 0 ID=cds-WP_000490275.1;Parent=gene-AB69_RS00225;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AB69_RS00225;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 74284 75357 . + . ID=gene-AB69_RS00220;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AB69_RS00220;old_locus_tag=AB69_4777 NZ_JHDO01000131.1 Protein Homology CDS 74284 75357 . + 0 ID=cds-WP_001299799.1;Parent=gene-AB69_RS00220;Dbxref=GenBank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AB69_RS00220;product=patatin-like phospholipase family protein;protein_id=WP_001299799.1;transl_table=11 NZ_JHDO01000131.1 RefSeq gene 75354 76133 . + . ID=gene-AB69_RS00215;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AB69_RS00215;old_locus_tag=AB69_4778 NZ_JHDO01000131.1 Protein Homology CDS 75354 76133 . + 0 ID=cds-WP_000563040.1;Parent=gene-AB69_RS00215;Dbxref=GenBank:WP_000563040.1;Name=WP_000563040.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026291.2;locus_tag=AB69_RS00215;product=metal-dependent hydrolase;protein_id=WP_000563040.1;transl_table=11 ##sequence-region NZ_JHDO01000132.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000132.1 RefSeq region 1 2047 . + . ID=NZ_JHDO01000132.1:1..2047;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000132.1 RefSeq gene 1 524 . + . ID=gene-AB69_RS00210;Name=AB69_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00210;old_locus_tag=AB69_4779;partial=true;start_range=.,1 NZ_JHDO01000132.1 Protein Homology CDS 1 524 . + 2 ID=cds-WP_032231721.1;Parent=gene-AB69_RS00210;Dbxref=GenBank:WP_032231721.1;Name=WP_032231721.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026291.2;locus_tag=AB69_RS00210;partial=true;product=TatD family hydrolase;protein_id=WP_032231721.1;start_range=.,1;transl_table=11 NZ_JHDO01000132.1 RefSeq gene 944 1807 . - . ID=gene-AB69_RS00205;Name=AB69_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00205;old_locus_tag=AB69_4780 NZ_JHDO01000132.1 Protein Homology CDS 944 1807 . - 0 ID=cds-WP_001088415.1-2;Parent=gene-AB69_RS00205;Dbxref=GenBank:WP_001088415.1;Name=WP_001088415.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB69_RS00205;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088415.1;transl_table=11 NZ_JHDO01000132.1 RefSeq gene 1779 2047 . - . ID=gene-AB69_RS00200;Name=AB69_RS00200;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00200;old_locus_tag=AB69_4781;partial=true NZ_JHDO01000132.1 Protein Homology CDS 1779 2047 . - 2 ID=cds-WP_032235718.1;Parent=gene-AB69_RS00200;Dbxref=GenBank:WP_032235718.1;Name=WP_032235718.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710120.1;locus_tag=AB69_RS00200;partial=true;product=glycyl radical enzyme domain-containing protein;protein_id=WP_032235718.1;transl_table=11 ##sequence-region NZ_JHDO01000133.1 1 43981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444104 NZ_JHDO01000133.1 RefSeq region 1 43981 . + . ID=NZ_JHDO01000133.1:1..43981;Dbxref=taxon:1444104;collection-date=2009-01-13;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S1_C3 NZ_JHDO01000133.1 RefSeq gene 308 1171 . - . ID=gene-AB69_RS00195;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AB69_RS00195;old_locus_tag=AB69_4782 NZ_JHDO01000133.1 Protein Homology CDS 308 1171 . - 0 ID=cds-WP_001088415.1-3;Parent=gene-AB69_RS00195;Dbxref=GenBank:WP_001088415.1;Name=WP_001088415.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB69_RS00195;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088415.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 1143 2693 . - . ID=gene-AB69_RS00190;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AB69_RS00190;old_locus_tag=AB69_4783 NZ_JHDO01000133.1 Protein Homology CDS 1143 2693 . - 0 ID=cds-WP_001143253.1;Parent=gene-AB69_RS00190;Dbxref=GenBank:WP_001143253.1;Name=WP_001143253.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AB69_RS00190;product=YjjI family glycine radical enzyme;protein_id=WP_001143253.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 2951 3730 . + . ID=gene-AB69_RS00185;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AB69_RS00185;old_locus_tag=AB69_4785 NZ_JHDO01000133.1 Protein Homology CDS 2951 3730 . + 0 ID=cds-WP_001298497.1;Parent=gene-AB69_RS00185;Dbxref=GenBank:WP_001298497.1;Name=WP_001298497.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AB69_RS00185;product=deoxyribose-phosphate aldolase;protein_id=WP_001298497.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 3857 5179 . + . ID=gene-AB69_RS00180;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AB69_RS00180;old_locus_tag=AB69_4786 NZ_JHDO01000133.1 Protein Homology CDS 3857 5179 . + 0 ID=cds-WP_000477807.1;Parent=gene-AB69_RS00180;Dbxref=GenBank:WP_000477807.1;Name=WP_000477807.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AB69_RS00180;product=thymidine phosphorylase;protein_id=WP_000477807.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 5231 6454 . + . ID=gene-AB69_RS00175;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AB69_RS00175;old_locus_tag=AB69_4787 NZ_JHDO01000133.1 Protein Homology CDS 5231 6454 . + 0 ID=cds-WP_000816471.1;Parent=gene-AB69_RS00175;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AB69_RS00175;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 6511 7230 . + . ID=gene-AB69_RS00170;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AB69_RS00170;old_locus_tag=AB69_4788 NZ_JHDO01000133.1 Protein Homology CDS 6511 7230 . + 0 ID=cds-WP_000224877.1;Parent=gene-AB69_RS00170;Dbxref=GenBank:WP_000224877.1;Name=WP_000224877.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=AB69_RS00170;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 7397 8728 . + . ID=gene-AB69_RS00165;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=AB69_RS00165;old_locus_tag=AB69_4789 NZ_JHDO01000133.1 Protein Homology CDS 7397 8728 . + 0 ID=cds-WP_001293115.1;Parent=gene-AB69_RS00165;Dbxref=GenBank:WP_001293115.1;Name=WP_001293115.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418802.1;locus_tag=AB69_RS00165;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001293115.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 8729 9745 . - . ID=gene-AB69_RS29600;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AB69_RS29600;old_locus_tag=AB69_4790 NZ_JHDO01000133.1 Protein Homology CDS 8729 9745 . - 0 ID=cds-WP_000105884.1;Parent=gene-AB69_RS29600;Dbxref=GenBank:WP_000105884.1;Name=WP_000105884.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AB69_RS29600;product=lipoate--protein ligase LplA;protein_id=WP_000105884.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 9773 10417 . - . ID=gene-AB69_RS29605;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AB69_RS29605;old_locus_tag=AB69_4791 NZ_JHDO01000133.1 Protein Homology CDS 9773 10417 . - 0 ID=cds-WP_000124615.1;Parent=gene-AB69_RS29605;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AB69_RS29605;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 10523 11491 . + . ID=gene-AB69_RS00150;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AB69_RS00150;old_locus_tag=AB69_4792 NZ_JHDO01000133.1 Protein Homology CDS 10523 11491 . + 0 ID=cds-WP_001132955.1;Parent=gene-AB69_RS00150;Dbxref=GenBank:WP_001132955.1;Name=WP_001132955.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AB69_RS00150;product=phosphoserine phosphatase;protein_id=WP_001132955.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 11540 12922 . + . ID=gene-AB69_RS00145;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AB69_RS00145;old_locus_tag=AB69_4793 NZ_JHDO01000133.1 Protein Homology CDS 11540 12922 . + 0 ID=cds-WP_001029687.1;Parent=gene-AB69_RS00145;Dbxref=GenBank:WP_001029687.1;Name=WP_001029687.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AB69_RS00145;product=DNA repair protein RadA;protein_id=WP_001029687.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 12943 14175 . + . ID=gene-AB69_RS00140;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AB69_RS00140;old_locus_tag=AB69_4794 NZ_JHDO01000133.1 Protein Homology CDS 12943 14175 . + 0 ID=cds-WP_000093814.1;Parent=gene-AB69_RS00140;Dbxref=GenBank:WP_000093814.1;Name=WP_000093814.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AB69_RS00140;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093814.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 14209 14376 . + . ID=gene-AB69_RS30065;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=AB69_RS30065;old_locus_tag=AB69_4795 NZ_JHDO01000133.1 Protein Homology CDS 14209 14376 . + 0 ID=cds-WP_032219483.1;Parent=gene-AB69_RS30065;Dbxref=GenBank:WP_032219483.1;Name=WP_032219483.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007431.1;locus_tag=AB69_RS30065;product=NadS family protein;protein_id=WP_032219483.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 14483 16150 . - . ID=gene-AB69_RS00130;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AB69_RS00130;old_locus_tag=AB69_4796 NZ_JHDO01000133.1 Protein Homology CDS 14483 16150 . - 0 ID=cds-WP_000046749.1;Parent=gene-AB69_RS00130;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AB69_RS00130;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 16361 18298 . + . ID=gene-AB69_RS00125;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AB69_RS00125;old_locus_tag=AB69_4797 NZ_JHDO01000133.1 Protein Homology CDS 16361 18298 . + 0 ID=cds-WP_000409451.1;Parent=gene-AB69_RS00125;Dbxref=GenBank:WP_000409451.1;Name=WP_000409451.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AB69_RS00125;product=murein transglycosylase;protein_id=WP_000409451.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 18388 18714 . + . ID=gene-AB69_RS00120;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AB69_RS00120;old_locus_tag=AB69_4798 NZ_JHDO01000133.1 Protein Homology CDS 18388 18714 . + 0 ID=cds-WP_000068679.1;Parent=gene-AB69_RS00120;Dbxref=GenBank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AB69_RS00120;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 18861 19373 . - . ID=gene-AB69_RS00115;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AB69_RS00115;old_locus_tag=AB69_4799 NZ_JHDO01000133.1 Protein Homology CDS 18861 19373 . - 0 ID=cds-WP_001338221.1;Parent=gene-AB69_RS00115;Dbxref=GenBank:WP_001338221.1;Name=WP_001338221.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AB69_RS00115;product=inosine/xanthosine triphosphatase;protein_id=WP_001338221.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 19425 20072 . + . ID=gene-AB69_RS00110;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AB69_RS00110;old_locus_tag=AB69_4800 NZ_JHDO01000133.1 Protein Homology CDS 19425 20072 . + 0 ID=cds-WP_000942344.1;Parent=gene-AB69_RS00110;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AB69_RS00110;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 20069 20938 . - . ID=gene-AB69_RS00105;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AB69_RS00105;old_locus_tag=AB69_4801 NZ_JHDO01000133.1 Protein Homology CDS 20069 20938 . - 0 ID=cds-WP_000371666.1;Parent=gene-AB69_RS00105;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AB69_RS00105;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 21149 21622 . + . ID=gene-AB69_RS00100;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AB69_RS00100;old_locus_tag=AB69_4802 NZ_JHDO01000133.1 Protein Homology CDS 21149 21622 . + 0 ID=cds-WP_000875487.1;Parent=gene-AB69_RS00100;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AB69_RS00100;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 21635 22324 . + . ID=gene-AB69_RS00095;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AB69_RS00095;old_locus_tag=AB69_4803 NZ_JHDO01000133.1 Protein Homology CDS 21635 22324 . + 0 ID=cds-WP_032222131.1;Parent=gene-AB69_RS00095;Dbxref=GenBank:WP_032222131.1;Name=WP_032222131.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418815.1;locus_tag=AB69_RS00095;product=two-component system response regulator CreB;protein_id=WP_032222131.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 22324 23748 . + . ID=gene-AB69_RS00090;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AB69_RS00090;old_locus_tag=AB69_4804 NZ_JHDO01000133.1 Protein Homology CDS 22324 23748 . + 0 ID=cds-WP_001219577.1;Parent=gene-AB69_RS00090;Dbxref=GenBank:WP_001219577.1;Name=WP_001219577.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418816.1;locus_tag=AB69_RS00090;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219577.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 23806 25158 . + . ID=gene-AB69_RS00085;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AB69_RS00085;old_locus_tag=AB69_4805 NZ_JHDO01000133.1 Protein Homology CDS 23806 25158 . + 0 ID=cds-WP_032231628.1;Parent=gene-AB69_RS00085;Dbxref=GenBank:WP_032231628.1;Name=WP_032231628.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418817.1;locus_tag=AB69_RS00085;product=cell envelope integrity protein CreD;protein_id=WP_032231628.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 25218 25934 . - . ID=gene-AB69_RS00080;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AB69_RS00080;old_locus_tag=AB69_4806 NZ_JHDO01000133.1 Protein Homology CDS 25218 25934 . - 0 ID=cds-WP_001194358.1;Parent=gene-AB69_RS00080;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AB69_RS00080;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 26030 26170 . + . ID=gene-AB69_RS0125565;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AB69_RS0125565 NZ_JHDO01000133.1 Protein Homology CDS 26030 26170 . + 0 ID=cds-WP_001303782.1;Parent=gene-AB69_RS0125565;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AB69_RS0125565;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 26570 27256 . + . ID=gene-AB69_RS00075;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AB69_RS00075;old_locus_tag=AB69_4807 NZ_JHDO01000133.1 Protein Homology CDS 26570 27256 . + 0 ID=cds-WP_001223132.1;Parent=gene-AB69_RS00075;Dbxref=GenBank:WP_001223132.1;Name=WP_001223132.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418820.1;locus_tag=AB69_RS00075;product=tRNA/rRNA methyltransferase;protein_id=WP_001223132.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 27470 27535 . + . ID=gene-AB69_RS0125570;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AB69_RS0125570 NZ_JHDO01000133.1 Protein Homology CDS 27470 27535 . + 0 ID=cds-WP_001386572.1;Parent=gene-AB69_RS0125570;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AB69_RS0125570;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JHDO01000133.1 cmsearch sequence_feature 27471 27590 . + . ID=id-NZ_JHDO01000133.1:27471..27590;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JHDO01000133.1 RefSeq gene 27617 30079 . + . ID=gene-AB69_RS00070;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AB69_RS00070;old_locus_tag=AB69_4808 NZ_JHDO01000133.1 Protein Homology CDS 27617 30079 . + 0 ID=cds-WP_032235720.1;Parent=gene-AB69_RS00070;Dbxref=GenBank:WP_032235720.1;Name=WP_032235720.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AB69_RS00070;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_032235720.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 30081 31013 . + . ID=gene-AB69_RS00065;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AB69_RS00065;old_locus_tag=AB69_4809 NZ_JHDO01000133.1 Protein Homology CDS 30081 31013 . + 0 ID=cds-WP_000241662.1;Parent=gene-AB69_RS00065;Dbxref=GenBank:WP_000241662.1;Name=WP_000241662.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414544.1;locus_tag=AB69_RS00065;product=homoserine kinase;protein_id=WP_000241662.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 31014 32300 . + . ID=gene-AB69_RS00060;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AB69_RS00060;old_locus_tag=AB69_4810 NZ_JHDO01000133.1 Protein Homology CDS 31014 32300 . + 0 ID=cds-WP_000781074.1;Parent=gene-AB69_RS00060;Dbxref=GenBank:WP_000781074.1;Name=WP_000781074.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414545.1;locus_tag=AB69_RS00060;product=threonine synthase;protein_id=WP_000781074.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 32514 32810 . + . ID=gene-AB69_RS00055;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AB69_RS00055;old_locus_tag=AB69_4811 NZ_JHDO01000133.1 Protein Homology CDS 32514 32810 . + 0 ID=cds-WP_000738719.1;Parent=gene-AB69_RS00055;Dbxref=GenBank:WP_000738719.1;Name=WP_000738719.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AB69_RS00055;product=DUF2502 domain-containing protein;protein_id=WP_000738719.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 32963 33739 . - . ID=gene-AB69_RS00050;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AB69_RS00050;old_locus_tag=AB69_4812 NZ_JHDO01000133.1 Protein Homology CDS 32963 33739 . - 0 ID=cds-WP_000906197.1;Parent=gene-AB69_RS00050;Dbxref=GenBank:WP_000906197.1;Name=WP_000906197.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414547.1;locus_tag=AB69_RS00050;product=peroxide stress protein YaaA;protein_id=WP_000906197.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 33809 35239 . - . ID=gene-AB69_RS00045;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AB69_RS00045;old_locus_tag=AB69_4813 NZ_JHDO01000133.1 Protein Homology CDS 33809 35239 . - 0 ID=cds-WP_001112606.1;Parent=gene-AB69_RS00045;Dbxref=GenBank:WP_001112606.1;Name=WP_001112606.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AB69_RS00045;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112606.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 35518 36471 . + . ID=gene-AB69_RS00040;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB69_RS00040;old_locus_tag=AB69_4814 NZ_JHDO01000133.1 Protein Homology CDS 35518 36471 . + 0 ID=cds-WP_000130185.1;Parent=gene-AB69_RS00040;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AB69_RS00040;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 36586 37173 . + . ID=gene-AB69_RS00035;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AB69_RS00035;old_locus_tag=AB69_4815 NZ_JHDO01000133.1 Protein Homology CDS 36586 37173 . + 0 ID=cds-WP_001295414.1;Parent=gene-AB69_RS00035;Dbxref=GenBank:WP_001295414.1;Name=WP_001295414.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AB69_RS00035;product=molybdopterin adenylyltransferase;protein_id=WP_001295414.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 37208 37774 . - . ID=gene-AB69_RS00030;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AB69_RS00030;old_locus_tag=AB69_4816 NZ_JHDO01000133.1 Protein Homology CDS 37208 37774 . - 0 ID=cds-WP_000528538.1;Parent=gene-AB69_RS00030;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AB69_RS00030;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 37923 38636 . - . ID=gene-AB69_RS00025;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AB69_RS00025;old_locus_tag=AB69_4817 NZ_JHDO01000133.1 Protein Homology CDS 37923 38636 . - 0 ID=cds-WP_032231630.1;Parent=gene-AB69_RS00025;Dbxref=GenBank:WP_032231630.1;Name=WP_032231630.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AB69_RS00025;product=acidic protein MsyB;protein_id=WP_032231630.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 38662 39066 . - . ID=gene-AB69_RS00020;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AB69_RS00020;old_locus_tag=AB69_4818 NZ_JHDO01000133.1 Protein Homology CDS 38662 39066 . - 0 ID=cds-WP_000843565.1;Parent=gene-AB69_RS00020;Dbxref=GenBank:WP_000843565.1;Name=WP_000843565.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414554.1;locus_tag=AB69_RS00020;product=DUF2541 family protein;protein_id=WP_000843565.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 39443 41359 . + . ID=gene-AB69_RS00015;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AB69_RS00015;old_locus_tag=AB69_4819 NZ_JHDO01000133.1 Protein Homology CDS 39443 41359 . + 0 ID=cds-WP_000516135.1;Parent=gene-AB69_RS00015;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AB69_RS00015;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 41448 42578 . + . ID=gene-AB69_RS00010;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AB69_RS00010;old_locus_tag=AB69_4820 NZ_JHDO01000133.1 Protein Homology CDS 41448 42578 . + 0 ID=cds-WP_001118476.1;Parent=gene-AB69_RS00010;Dbxref=GenBank:WP_001118476.1;Name=WP_001118476.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414556.1;locus_tag=AB69_RS00010;product=molecular chaperone DnaJ;protein_id=WP_001118476.1;transl_table=11 NZ_JHDO01000133.1 RefSeq gene 42841 43953 . - . ID=gene-AB69_RS00005;Name=AB69_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB69_RS00005;old_locus_tag=AB69_4821 NZ_JHDO01000133.1 Protein Homology CDS 42841 43953 . - 0 ID=cds-WP_001300563.1-6;Parent=gene-AB69_RS00005;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AB69_RS00005;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ###