##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM62725v1 #!genome-build-accession NCBI_Assembly:GCF_000627255.1 #!annotation-date 06/16/2025 09:02:57 #!annotation-source NCBI RefSeq GCF_000627255.1-RS_2025_06_16 ##sequence-region NZ_JJLK01000001.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000001.1 RefSeq region 1 334 . + . ID=NZ_JJLK01000001.1:1..334;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000001.1 RefSeq pseudogene 1 297 . - . ID=gene-AD12_RS22805;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=pseudogene;locus_tag=AD12_RS22805;old_locus_tag=AD12_4932;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000001.1 Protein Homology CDS 1 297 . - 0 ID=cds-AD12_RS22805;Parent=gene-AD12_RS22805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707259.1;locus_tag=AD12_RS22805;partial=true;product=iron/manganese ABC transporter permease subunit SitD;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000002.1 1 637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000002.1 RefSeq region 1 637 . + . ID=NZ_JJLK01000002.1:1..637;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000002.1 RefSeq pseudogene 1 637 . - . ID=gene-AD12_RS22800;Name=AD12_RS22800;end_range=637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22800;old_locus_tag=AD12_4933;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000002.1 Protein Homology CDS 1 637 . - 0 ID=cds-AD12_RS22800;Parent=gene-AD12_RS22800;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308264.2;locus_tag=AD12_RS22800;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000003.1 1 775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000003.1 RefSeq region 1 775 . + . ID=NZ_JJLK01000003.1:1..775;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000003.1 RefSeq gene 1 210 . + . ID=gene-AD12_RS22795;Name=AD12_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22795;old_locus_tag=AD12_4934;partial=true;start_range=.,1 NZ_JJLK01000003.1 Protein Homology CDS 1 210 . + 0 ID=cds-WP_023909264.1;Parent=gene-AD12_RS22795;Dbxref=GenBank:WP_023909264.1;Name=WP_023909264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AD12_RS22795;partial=true;product=JAB domain-containing protein;protein_id=WP_023909264.1;start_range=.,1;transl_table=11 NZ_JJLK01000003.1 RefSeq gene 273 494 . + . ID=gene-AD12_RS22790;Name=AD12_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22790;old_locus_tag=AD12_4935 NZ_JJLK01000003.1 Protein Homology CDS 273 494 . + 0 ID=cds-WP_032286237.1;Parent=gene-AD12_RS22790;Dbxref=GenBank:WP_032286237.1;Name=WP_032286237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AD12_RS22790;product=DUF987 domain-containing protein;protein_id=WP_032286237.1;transl_table=11 NZ_JJLK01000003.1 RefSeq gene 657 775 . + . ID=gene-AD12_RS28435;Name=AD12_RS28435;end_range=775,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28435;partial=true NZ_JJLK01000003.1 Protein Homology CDS 657 775 . + 0 ID=cds-WP_170908280.1;Parent=gene-AD12_RS28435;Dbxref=GenBank:WP_170908280.1;Name=WP_170908280.1;Ontology_term=GO:0051495;end_range=775,.;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310832.1;locus_tag=AD12_RS28435;partial=true;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_170908280.1;transl_table=11 ##sequence-region NZ_JJLK01000004.1 1 1615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000004.1 RefSeq region 1 1615 . + . ID=NZ_JJLK01000004.1:1..1615;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000004.1 RefSeq gene 1 525 . - . ID=gene-AD12_RS22780;Name=AD12_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22780;old_locus_tag=AD12_4937;partial=true;start_range=.,1 NZ_JJLK01000004.1 Protein Homology CDS 1 525 . - 0 ID=cds-WP_032286239.1;Parent=gene-AD12_RS22780;Dbxref=GenBank:WP_032286239.1;Name=WP_032286239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AD12_RS22780;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_032286239.1;start_range=.,1;transl_table=11 NZ_JJLK01000004.1 RefSeq gene 897 1615 . - . ID=gene-AD12_RS22775;Name=AD12_RS22775;end_range=1615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22775;old_locus_tag=AD12_4938;partial=true NZ_JJLK01000004.1 Protein Homology CDS 897 1615 . - 2 ID=cds-WP_032286240.1;Parent=gene-AD12_RS22775;Dbxref=GenBank:WP_032286240.1;Name=WP_032286240.1;Ontology_term=GO:0003924,GO:0005525;end_range=1615,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AD12_RS22775;partial=true;product=GTPase family protein;protein_id=WP_032286240.1;transl_table=11 ##sequence-region NZ_JJLK01000005.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000005.1 RefSeq region 1 773 . + . ID=NZ_JJLK01000005.1:1..773;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000005.1 RefSeq gene 54 530 . - . ID=gene-AD12_RS22770;Name=AD12_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22770;old_locus_tag=AD12_4939 NZ_JJLK01000005.1 Protein Homology CDS 54 530 . - 0 ID=cds-WP_001186727.1;Parent=gene-AD12_RS22770;Dbxref=GenBank:WP_001186727.1;Name=WP_001186727.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AD12_RS22770;product=JAB domain-containing protein;protein_id=WP_001186727.1;transl_table=11 NZ_JJLK01000005.1 RefSeq gene 546 773 . - . ID=gene-AD12_RS0122810;Name=AD12_RS0122810;end_range=773,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122810;old_locus_tag=AD12_4940;partial=true NZ_JJLK01000005.1 Protein Homology CDS 546 773 . - 0 ID=cds-WP_021514716.1;Parent=gene-AD12_RS0122810;Dbxref=GenBank:WP_021514716.1;Name=WP_021514716.1;end_range=773,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AD12_RS0122810;partial=true;product=antirestriction protein;protein_id=WP_021514716.1;transl_table=11 ##sequence-region NZ_JJLK01000006.1 1 392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000006.1 RefSeq region 1 392 . + . ID=NZ_JJLK01000006.1:1..392;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000006.1 RefSeq gene 1 77 . - . ID=gene-AD12_RS29360;Name=AD12_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29360;partial=true;start_range=.,1 NZ_JJLK01000006.1 Protein Homology CDS 1 77 . - 0 ID=cds-WP_227917199.1;Parent=gene-AD12_RS29360;Dbxref=GenBank:WP_227917199.1;Name=WP_227917199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707260.1;locus_tag=AD12_RS29360;partial=true;product=hypothetical protein;protein_id=WP_227917199.1;start_range=.,1;transl_table=11 NZ_JJLK01000006.1 RefSeq pseudogene 74 392 . - . ID=gene-AD12_RS22765;Name=sitB;end_range=392,.;gbkey=Gene;gene=sitB;gene_biotype=pseudogene;locus_tag=AD12_RS22765;old_locus_tag=AD12_4941;partial=true;pseudo=true NZ_JJLK01000006.1 Protein Homology CDS 74 392 . - 1 ID=cds-AD12_RS22765;Parent=gene-AD12_RS22765;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=392,.;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707261.1;locus_tag=AD12_RS22765;partial=true;product=iron/manganese ABC transporter ATP-binding protein SitB;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000007.1 1 16409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000007.1 RefSeq region 1 16409 . + . ID=NZ_JJLK01000007.1:1..16409;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000007.1 RefSeq pseudogene 1 160 . - . ID=gene-AD12_RS28440;Name=AD12_RS28440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28440;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000007.1 Protein Homology CDS 1 160 . - 0 ID=cds-AD12_RS28440;Parent=gene-AD12_RS28440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090899.1;locus_tag=AD12_RS28440;partial=true;product=tail assembly protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 97 840 . - . ID=gene-AD12_RS22760;Name=AD12_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22760;old_locus_tag=AD12_4943 NZ_JJLK01000007.1 Protein Homology CDS 97 840 . - 0 ID=cds-WP_001349921.1;Parent=gene-AD12_RS22760;Dbxref=GenBank:WP_001349921.1;Name=WP_001349921.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD12_RS22760;product=C40 family peptidase;protein_id=WP_001349921.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 846 1544 . - . ID=gene-AD12_RS22755;Name=AD12_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22755;old_locus_tag=AD12_4944 NZ_JJLK01000007.1 Protein Homology CDS 846 1544 . - 0 ID=cds-WP_001152622.1;Parent=gene-AD12_RS22755;Dbxref=GenBank:WP_001152622.1;Name=WP_001152622.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=AD12_RS22755;product=phage minor tail protein L;protein_id=WP_001152622.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 1544 1873 . - . ID=gene-AD12_RS22750;Name=AD12_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22750;old_locus_tag=AD12_4945 NZ_JJLK01000007.1 Protein Homology CDS 1544 1873 . - 0 ID=cds-WP_000847360.1;Parent=gene-AD12_RS22750;Dbxref=GenBank:WP_000847360.1;Name=WP_000847360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309671.1;locus_tag=AD12_RS22750;product=phage tail protein;protein_id=WP_000847360.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 1870 4431 . - . ID=gene-AD12_RS22745;Name=AD12_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22745;old_locus_tag=AD12_4946 NZ_JJLK01000007.1 Protein Homology CDS 1870 4431 . - 0 ID=cds-WP_000840335.1;Parent=gene-AD12_RS22745;Dbxref=GenBank:WP_000840335.1;Name=WP_000840335.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309670.1;locus_tag=AD12_RS22745;product=phage tail tape measure protein;protein_id=WP_000840335.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 4424 4858 . - . ID=gene-AD12_RS22740;Name=AD12_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22740;old_locus_tag=AD12_4947 NZ_JJLK01000007.1 Protein Homology CDS 4424 4858 . - 0 ID=cds-WP_000459457.1;Parent=gene-AD12_RS22740;Dbxref=GenBank:WP_000459457.1;Name=WP_000459457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=AD12_RS22740;product=phage tail assembly protein T;protein_id=WP_000459457.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 4840 5262 . - . ID=gene-AD12_RS22735;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AD12_RS22735;old_locus_tag=AD12_4948 NZ_JJLK01000007.1 Protein Homology CDS 4840 5262 . - 0 ID=cds-WP_032286242.1;Parent=gene-AD12_RS22735;Dbxref=GenBank:WP_032286242.1;Name=WP_032286242.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=AD12_RS22735;product=phage tail assembly chaperone G;protein_id=WP_032286242.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 5278 6018 . - . ID=gene-AD12_RS22730;Name=AD12_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22730;old_locus_tag=AD12_4949 NZ_JJLK01000007.1 Protein Homology CDS 5278 6018 . - 0 ID=cds-WP_001349920.1;Parent=gene-AD12_RS22730;Dbxref=GenBank:WP_001349920.1;Name=WP_001349920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=AD12_RS22730;product=phage tail protein;protein_id=WP_001349920.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 6026 6421 . - . ID=gene-AD12_RS22725;Name=AD12_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22725;old_locus_tag=AD12_4950 NZ_JJLK01000007.1 Protein Homology CDS 6026 6421 . - 0 ID=cds-WP_000683105.1;Parent=gene-AD12_RS22725;Dbxref=GenBank:WP_000683105.1;Name=WP_000683105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309666.1;locus_tag=AD12_RS22725;product=phage minor tail U family protein;protein_id=WP_000683105.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 6418 6996 . - . ID=gene-AD12_RS22720;Name=AD12_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22720;old_locus_tag=AD12_4951 NZ_JJLK01000007.1 Protein Homology CDS 6418 6996 . - 0 ID=cds-WP_000975070.1;Parent=gene-AD12_RS22720;Dbxref=GenBank:WP_000975070.1;Name=WP_000975070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309665.1;locus_tag=AD12_RS22720;product=phage tail protein;protein_id=WP_000975070.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 7008 7361 . - . ID=gene-AD12_RS22715;Name=AD12_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22715;old_locus_tag=AD12_4952 NZ_JJLK01000007.1 Protein Homology CDS 7008 7361 . - 0 ID=cds-WP_000753007.1;Parent=gene-AD12_RS22715;Dbxref=GenBank:WP_000753007.1;Name=WP_000753007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309664.1;locus_tag=AD12_RS22715;product=head-tail joining protein;protein_id=WP_000753007.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 7373 7771 . - . ID=gene-AD12_RS22710;Name=AD12_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22710;old_locus_tag=AD12_4953 NZ_JJLK01000007.1 Protein Homology CDS 7373 7771 . - 0 ID=cds-WP_032286243.1;Parent=gene-AD12_RS22710;Dbxref=GenBank:WP_032286243.1;Name=WP_032286243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309663.1;locus_tag=AD12_RS22710;product=DNA-packaging protein FI;protein_id=WP_032286243.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 7813 8838 . - . ID=gene-AD12_RS22705;Name=AD12_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22705;old_locus_tag=AD12_4954 NZ_JJLK01000007.1 Protein Homology CDS 7813 8838 . - 0 ID=cds-WP_000063280.1;Parent=gene-AD12_RS22705;Dbxref=GenBank:WP_000063280.1;Name=WP_000063280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309662.1;locus_tag=AD12_RS22705;product=major capsid protein;protein_id=WP_000063280.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 8894 9226 . - . ID=gene-AD12_RS22700;Name=AD12_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22700;old_locus_tag=AD12_4955 NZ_JJLK01000007.1 Protein Homology CDS 8894 9226 . - 0 ID=cds-WP_001295978.1;Parent=gene-AD12_RS22700;Dbxref=GenBank:WP_001295978.1;Name=WP_001295978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309661.1;locus_tag=AD12_RS22700;product=head decoration protein;protein_id=WP_001295978.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 9236 10555 . - . ID=gene-AD12_RS22695;Name=AD12_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22695;old_locus_tag=AD12_4956 NZ_JJLK01000007.1 Protein Homology CDS 9236 10555 . - 0 ID=cds-WP_032286244.1;Parent=gene-AD12_RS22695;Dbxref=GenBank:WP_032286244.1;Name=WP_032286244.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309660.1;locus_tag=AD12_RS22695;product=S49 family peptidase;protein_id=WP_032286244.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 10536 12137 . - . ID=gene-AD12_RS0122815;Name=AD12_RS0122815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122815;old_locus_tag=AD12_4957 NZ_JJLK01000007.1 Protein Homology CDS 10536 12137 . - 0 ID=cds-WP_032286246.1;Parent=gene-AD12_RS0122815;Dbxref=GenBank:WP_032286246.1;Name=WP_032286246.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309659.1;locus_tag=AD12_RS0122815;product=phage portal protein;protein_id=WP_032286246.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 12134 12340 . - . ID=gene-AD12_RS22690;Name=AD12_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22690;old_locus_tag=AD12_4958 NZ_JJLK01000007.1 Protein Homology CDS 12134 12340 . - 0 ID=cds-WP_000198149.1;Parent=gene-AD12_RS22690;Dbxref=GenBank:WP_000198149.1;Name=WP_000198149.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309658.1;locus_tag=AD12_RS22690;product=phage head-tail joining protein;protein_id=WP_000198149.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 12337 14262 . - . ID=gene-AD12_RS22685;Name=AD12_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22685;old_locus_tag=AD12_4959 NZ_JJLK01000007.1 Protein Homology CDS 12337 14262 . - 0 ID=cds-WP_032286247.1;Parent=gene-AD12_RS22685;Dbxref=GenBank:WP_032286247.1;Name=WP_032286247.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=AD12_RS22685;product=phage terminase large subunit family protein;protein_id=WP_032286247.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 14237 14782 . - . ID=gene-AD12_RS22680;Name=nohD;gbkey=Gene;gene=nohD;gene_biotype=protein_coding;locus_tag=AD12_RS22680;old_locus_tag=AD12_4960 NZ_JJLK01000007.1 Protein Homology CDS 14237 14782 . - 0 ID=cds-WP_000453576.1;Parent=gene-AD12_RS22680;Dbxref=GenBank:WP_000453576.1;Name=WP_000453576.1;gbkey=CDS;gene=nohD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=AD12_RS22680;product=DNA-packaging protein;protein_id=WP_000453576.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 15171 15365 . + . ID=gene-AD12_RS0122830;Name=ylcI;gbkey=Gene;gene=ylcI;gene_biotype=protein_coding;locus_tag=AD12_RS0122830 NZ_JJLK01000007.1 Protein Homology CDS 15171 15365 . + 0 ID=cds-WP_032083248.1;Parent=gene-AD12_RS0122830;Dbxref=GenBank:WP_032083248.1;Name=WP_032083248.1;gbkey=CDS;gene=ylcI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307652.1;locus_tag=AD12_RS0122830;product=YlcI/YnfO family protein;protein_id=WP_032083248.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 15728 16021 . + . ID=gene-AD12_RS22675;Name=iss;gbkey=Gene;gene=iss;gene_biotype=protein_coding;locus_tag=AD12_RS22675;old_locus_tag=AD12_4961 NZ_JJLK01000007.1 Protein Homology CDS 15728 16021 . + 0 ID=cds-WP_000738423.1;Parent=gene-AD12_RS22675;Dbxref=GenBank:WP_000738423.1;Name=WP_000738423.1;gbkey=CDS;gene=iss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309652.1;locus_tag=AD12_RS22675;product=increased serum survival lipoprotein Iss;protein_id=WP_000738423.1;transl_table=11 NZ_JJLK01000007.1 RefSeq gene 16053 16409 . - . ID=gene-AD12_RS22670;Name=rzpD;end_range=16409,.;gbkey=Gene;gene=rzpD;gene_biotype=protein_coding;locus_tag=AD12_RS22670;old_locus_tag=AD12_4962;partial=true NZ_JJLK01000007.1 Protein Homology CDS 16053 16409 . - 0 ID=cds-WP_032178054.1;Parent=gene-AD12_RS22670;Dbxref=GenBank:WP_032178054.1;Name=WP_032178054.1;end_range=16409,.;gbkey=CDS;gene=rzpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415088.1;locus_tag=AD12_RS22670;partial=true;product=prophage endopeptidase RzpD;protein_id=WP_032178054.1;transl_table=11 ##sequence-region NZ_JJLK01000008.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000008.1 RefSeq region 1 968 . + . ID=NZ_JJLK01000008.1:1..968;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000008.1 RefSeq pseudogene 1 968 . - . ID=gene-AD12_RS22665;Name=AD12_RS22665;end_range=968,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22665;old_locus_tag=AD12_4963;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000008.1 Protein Homology CDS 1 968 . - 0 ID=cds-AD12_RS22665;Parent=gene-AD12_RS22665;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=968,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS22665;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000009.1 1 2247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000009.1 RefSeq region 1 2247 . + . ID=NZ_JJLK01000009.1:1..2247;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000009.1 RefSeq gene 1 602 . - . ID=gene-AD12_RS22660;Name=AD12_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22660;old_locus_tag=AD12_4964;partial=true;start_range=.,1 NZ_JJLK01000009.1 Protein Homology CDS 1 602 . - 0 ID=cds-WP_001774351.1;Parent=gene-AD12_RS22660;Dbxref=GenBank:WP_001774351.1;Name=WP_001774351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308264.2;locus_tag=AD12_RS22660;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001774351.1;start_range=.,1;transl_table=11 NZ_JJLK01000009.1 RefSeq gene 678 2247 . - . ID=gene-AD12_RS22655;Name=tssI;end_range=2247,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AD12_RS22655;old_locus_tag=AD12_4965;partial=true NZ_JJLK01000009.1 Protein Homology CDS 678 2247 . - 1 ID=cds-WP_032260817.1;Parent=gene-AD12_RS22655;Dbxref=GenBank:WP_032260817.1;Name=WP_032260817.1;Ontology_term=GO:0033103;end_range=2247,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308263.1;locus_tag=AD12_RS22655;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032260817.1;transl_table=11 ##sequence-region NZ_JJLK01000010.1 1 13124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000010.1 RefSeq region 1 13124 . + . ID=NZ_JJLK01000010.1:1..13124;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000010.1 RefSeq gene 1 2255 . - . ID=gene-AD12_RS22650;Name=AD12_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22650;old_locus_tag=AD12_4966;partial=true;start_range=.,1 NZ_JJLK01000010.1 Protein Homology CDS 1 2255 . - 0 ID=cds-WP_021533537.1;Parent=gene-AD12_RS22650;Dbxref=GenBank:WP_021533537.1;Name=WP_021533537.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD12_RS22650;partial=true;product=Tn3-like element TnAs1 family transposase;protein_id=WP_021533537.1;start_range=.,1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 2259 2819 . - . ID=gene-AD12_RS22645;Name=AD12_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22645;old_locus_tag=AD12_4967 NZ_JJLK01000010.1 Protein Homology CDS 2259 2819 . - 0 ID=cds-WP_001161490.1;Parent=gene-AD12_RS22645;Dbxref=GenBank:WP_001161490.1;Name=WP_001161490.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AD12_RS22645;product=recombinase family protein;protein_id=WP_001161490.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 3129 4706 . + . ID=gene-AD12_RS22640;Name=AD12_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22640;old_locus_tag=AD12_4969 NZ_JJLK01000010.1 Protein Homology CDS 3129 4706 . + 0 ID=cds-WP_001323889.1;Parent=gene-AD12_RS22640;Dbxref=GenBank:WP_001323889.1;Name=WP_001323889.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513488.1;locus_tag=AD12_RS22640;product=methyl-accepting chemotaxis protein;protein_id=WP_001323889.1;transl_table=11 NZ_JJLK01000010.1 RefSeq pseudogene 4893 5024 . + . ID=gene-AD12_RS29635;Name=AD12_RS29635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29635;old_locus_tag=AD12_4970;partial=true;pseudo=true;start_range=.,4893 NZ_JJLK01000010.1 Protein Homology CDS 4893 5024 . + 0 ID=cds-AD12_RS29635;Parent=gene-AD12_RS29635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=AD12_RS29635;partial=true;product=DUF6404 family protein;pseudo=true;start_range=.,4893;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 5044 5634 . - . ID=gene-AD12_RS22635;Name=AD12_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22635;old_locus_tag=AD12_4971 NZ_JJLK01000010.1 Protein Homology CDS 5044 5634 . - 0 ID=cds-WP_001350923.1;Parent=gene-AD12_RS22635;Dbxref=GenBank:WP_001350923.1;Name=WP_001350923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=AD12_RS22635;product=hypothetical protein;protein_id=WP_001350923.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 5631 5891 . - . ID=gene-AD12_RS22630;Name=AD12_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22630;old_locus_tag=AD12_4972 NZ_JJLK01000010.1 Protein Homology CDS 5631 5891 . - 0 ID=cds-WP_000343091.1;Parent=gene-AD12_RS22630;Dbxref=GenBank:WP_000343091.1;Name=WP_000343091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523449.1;locus_tag=AD12_RS22630;product=hypothetical protein;protein_id=WP_000343091.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 6184 6636 . + . ID=gene-AD12_RS22625;Name=AD12_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22625;old_locus_tag=AD12_4973 NZ_JJLK01000010.1 Protein Homology CDS 6184 6636 . + 0 ID=cds-WP_000670963.1;Parent=gene-AD12_RS22625;Dbxref=GenBank:WP_000670963.1;Name=WP_000670963.1;Ontology_term=GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000670962.1;locus_tag=AD12_RS22625;product=acyltransferase;protein_id=WP_000670963.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 6692 6958 . - . ID=gene-AD12_RS22620;Name=AD12_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22620;old_locus_tag=AD12_4974 NZ_JJLK01000010.1 Protein Homology CDS 6692 6958 . - 0 ID=cds-WP_001017350.1;Parent=gene-AD12_RS22620;Dbxref=GenBank:WP_001017350.1;Name=WP_001017350.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017350.1;locus_tag=AD12_RS22620;product=FAD-dependent oxidoreductase;protein_id=WP_001017350.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 6955 7224 . - . ID=gene-AD12_RS22615;Name=AD12_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22615;old_locus_tag=AD12_4975 NZ_JJLK01000010.1 Protein Homology CDS 6955 7224 . - 0 ID=cds-WP_000379710.1;Parent=gene-AD12_RS22615;Dbxref=GenBank:WP_000379710.1;Name=WP_000379710.1;Ontology_term=GO:0051119;gbkey=CDS;go_function=sugar transmembrane transporter activity|0051119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168572.1;locus_tag=AD12_RS22615;product=SemiSWEET transporter;protein_id=WP_000379710.1;transl_table=11 NZ_JJLK01000010.1 RefSeq pseudogene 7226 8003 . - . ID=gene-AD12_RS29765;Name=AD12_RS29765;end_range=8003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29765;partial=true;pseudo=true NZ_JJLK01000010.1 Protein Homology CDS 7226 8003 . - 0 ID=cds-AD12_RS29765;Parent=gene-AD12_RS29765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000166,GO:0003824;end_range=8003,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155535.1;locus_tag=AD12_RS29765;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 8164 8400 . + . ID=gene-AD12_RS28445;Name=cvi;gbkey=Gene;gene=cvi;gene_biotype=protein_coding;locus_tag=AD12_RS28445 NZ_JJLK01000010.1 Protein Homology CDS 8164 8400 . + 0 ID=cds-WP_001323890.1;Parent=gene-AD12_RS28445;Dbxref=GenBank:WP_001323890.1;Name=WP_001323890.1;gbkey=CDS;gene=cvi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323890.1;locus_tag=AD12_RS28445;product=colicin V immunity protein;protein_id=WP_001323890.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 8378 8689 . + . ID=gene-AD12_RS0122850;Name=cvaC;gbkey=Gene;gene=cvaC;gene_biotype=protein_coding;locus_tag=AD12_RS0122850 NZ_JJLK01000010.1 Protein Homology CDS 8378 8689 . + 0 ID=cds-WP_001259758.1;Parent=gene-AD12_RS0122850;Dbxref=GenBank:WP_001259758.1;Name=WP_001259758.1;gbkey=CDS;gene=cvaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259758.1;locus_tag=AD12_RS0122850;product=colicin V;protein_id=WP_001259758.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 8859 10955 . - . ID=gene-AD12_RS22605;Name=cvaB;gbkey=Gene;gene=cvaB;gene_biotype=protein_coding;locus_tag=AD12_RS22605;old_locus_tag=AD12_4979 NZ_JJLK01000010.1 Protein Homology CDS 8859 10955 . - 0 ID=cds-WP_000184924.1;Parent=gene-AD12_RS22605;Dbxref=GenBank:WP_000184924.1;Name=WP_000184924.1;gbkey=CDS;gene=cvaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184924.1;locus_tag=AD12_RS22605;product=colicin V export peptidase/ABC transporter CvaB;protein_id=WP_000184924.1;transl_table=11 NZ_JJLK01000010.1 RefSeq gene 10948 12222 . - . ID=gene-AD12_RS22600;Name=AD12_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22600;old_locus_tag=AD12_4980 NZ_JJLK01000010.1 Protein Homology CDS 10948 12222 . - 0 ID=cds-WP_000489608.1;Parent=gene-AD12_RS22600;Dbxref=GenBank:WP_000489608.1;Name=WP_000489608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489618.1;locus_tag=AD12_RS22600;product=HlyD family secretion protein;protein_id=WP_000489608.1;transl_table=11 NZ_JJLK01000010.1 RefSeq pseudogene 12833 13101 . + . ID=gene-AD12_RS22595;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=pseudogene;locus_tag=AD12_RS22595;old_locus_tag=AD12_4982;pseudo=true NZ_JJLK01000010.1 Protein Homology CDS 12833 13101 . + 0 ID=cds-AD12_RS22595;Parent=gene-AD12_RS22595;Note=frameshifted;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AD12_RS22595;product=type II toxin-antitoxin system antitoxin YacA;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000011.1 1 1697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000011.1 RefSeq region 1 1697 . + . ID=NZ_JJLK01000011.1:1..1697;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000011.1 RefSeq gene 1 471 . + . ID=gene-AD12_RS22590;Name=AD12_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22590;old_locus_tag=AD12_4983;partial=true;start_range=.,1 NZ_JJLK01000011.1 Protein Homology CDS 1 471 . + 0 ID=cds-WP_032286249.1;Parent=gene-AD12_RS22590;Dbxref=GenBank:WP_032286249.1;Name=WP_032286249.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544402.1;locus_tag=AD12_RS22590;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032286249.1;start_range=.,1;transl_table=11 NZ_JJLK01000011.1 RefSeq gene 634 852 . - . ID=gene-AD12_RS22585;Name=AD12_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22585;old_locus_tag=AD12_4985 NZ_JJLK01000011.1 Protein Homology CDS 634 852 . - 0 ID=cds-WP_000972391.1;Parent=gene-AD12_RS22585;Dbxref=GenBank:WP_000972391.1;Name=WP_000972391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504085.1;locus_tag=AD12_RS22585;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000972391.1;transl_table=11 NZ_JJLK01000011.1 RefSeq gene 943 1697 . - . ID=gene-AD12_RS22580;Name=AD12_RS22580;end_range=1697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22580;old_locus_tag=AD12_4986;partial=true NZ_JJLK01000011.1 Protein Homology CDS 943 1697 . - 2 ID=cds-WP_032286250.1;Parent=gene-AD12_RS22580;Dbxref=GenBank:WP_032286250.1;Name=WP_032286250.1;end_range=1697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226050.1;locus_tag=AD12_RS22580;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_032286250.1;transl_table=11 ##sequence-region NZ_JJLK01000012.1 1 2173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000012.1 RefSeq region 1 2173 . + . ID=NZ_JJLK01000012.1:1..2173;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000012.1 RefSeq gene 1 537 . - . ID=gene-AD12_RS22575;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AD12_RS22575;old_locus_tag=AD12_4987;partial=true;start_range=.,1 NZ_JJLK01000012.1 Protein Homology CDS 1 537 . - 0 ID=cds-WP_032286252.1;Parent=gene-AD12_RS22575;Dbxref=GenBank:WP_032286252.1;Name=WP_032286252.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AD12_RS22575;partial=true;product=type 1 fimbrial major subunit FimA;protein_id=WP_032286252.1;start_range=.,1;transl_table=11 NZ_JJLK01000012.1 RefSeq gene 1017 1613 . - . ID=gene-AD12_RS22570;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AD12_RS22570;old_locus_tag=AD12_4988 NZ_JJLK01000012.1 Protein Homology CDS 1017 1613 . - 0 ID=cds-WP_000044711.1;Parent=gene-AD12_RS22570;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AD12_RS22570;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JJLK01000012.1 RefSeq pseudogene 2091 2173 . - . ID=gene-AD12_RS28450;Name=AD12_RS28450;end_range=2173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28450;partial=true;pseudo=true NZ_JJLK01000012.1 Protein Homology CDS 2091 2173 . - 2 ID=cds-AD12_RS28450;Parent=gene-AD12_RS28450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AD12_RS28450;partial=true;product=integrase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000013.1 1 1469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000013.1 RefSeq region 1 1469 . + . ID=NZ_JJLK01000013.1:1..1469;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000013.1 RefSeq gene 1 525 . - . ID=gene-AD12_RS22565;Name=AD12_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22565;old_locus_tag=AD12_4989;partial=true;start_range=.,1 NZ_JJLK01000013.1 Protein Homology CDS 1 525 . - 0 ID=cds-WP_032286254.1;Parent=gene-AD12_RS22565;Dbxref=GenBank:WP_032286254.1;Name=WP_032286254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AD12_RS22565;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_032286254.1;start_range=.,1;transl_table=11 NZ_JJLK01000013.1 RefSeq gene 897 1469 . - . ID=gene-AD12_RS22560;Name=AD12_RS22560;end_range=1469,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22560;old_locus_tag=AD12_4990;partial=true NZ_JJLK01000013.1 Protein Homology CDS 897 1469 . - 0 ID=cds-WP_032286255.1;Parent=gene-AD12_RS22560;Dbxref=GenBank:WP_032286255.1;Name=WP_032286255.1;Ontology_term=GO:0003924,GO:0005525;end_range=1469,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AD12_RS22560;partial=true;product=GTPase family protein;protein_id=WP_032286255.1;transl_table=11 ##sequence-region NZ_JJLK01000014.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000014.1 RefSeq region 1 741 . + . ID=NZ_JJLK01000014.1:1..741;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000014.1 RefSeq pseudogene 1 741 . - . ID=gene-AD12_RS25915;Name=AD12_RS25915;end_range=741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS25915;old_locus_tag=AD12_4991;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000014.1 Protein Homology CDS 1 741 . - 1 ID=cds-AD12_RS25915;Parent=gene-AD12_RS25915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=741,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976766.1;locus_tag=AD12_RS25915;partial=true;product=IS3-like element IS2 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000015.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000015.1 RefSeq region 1 399 . + . ID=NZ_JJLK01000015.1:1..399;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000015.1 RefSeq pseudogene 1 399 . - . ID=gene-AD12_RS22550;Name=AD12_RS22550;end_range=399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22550;old_locus_tag=AD12_4992;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000015.1 Protein Homology CDS 1 399 . - 1 ID=cds-AD12_RS22550;Parent=gene-AD12_RS22550;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=399,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS22550;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000016.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000016.1 RefSeq region 1 565 . + . ID=NZ_JJLK01000016.1:1..565;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000016.1 RefSeq gene 1 214 . + . ID=gene-AD12_RS22545;Name=AD12_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22545;old_locus_tag=AD12_4993;partial=true;start_range=.,1 NZ_JJLK01000016.1 Protein Homology CDS 1 214 . + 1 ID=cds-WP_032286257.1;Parent=gene-AD12_RS22545;Dbxref=GenBank:WP_032286257.1;Name=WP_032286257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AD12_RS22545;partial=true;product=antirestriction protein;protein_id=WP_032286257.1;start_range=.,1;transl_table=11 NZ_JJLK01000016.1 RefSeq gene 230 565 . + . ID=gene-AD12_RS22540;Name=AD12_RS22540;end_range=565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22540;old_locus_tag=AD12_4994;partial=true NZ_JJLK01000016.1 Protein Homology CDS 230 565 . + 0 ID=cds-WP_032286258.1;Parent=gene-AD12_RS22540;Dbxref=GenBank:WP_032286258.1;Name=WP_032286258.1;end_range=565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AD12_RS22540;partial=true;product=JAB domain-containing protein;protein_id=WP_032286258.1;transl_table=11 ##sequence-region NZ_JJLK01000017.1 1 1575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000017.1 RefSeq region 1 1575 . + . ID=NZ_JJLK01000017.1:1..1575;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000017.1 RefSeq pseudogene 1 1575 . - . ID=gene-AD12_RS0122855;Name=AD12_RS0122855;end_range=1575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0122855;old_locus_tag=AD12_4995;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000017.1 Protein Homology CDS 1 1575 . - 0 ID=cds-AD12_RS0122855;Parent=gene-AD12_RS0122855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=AD12_RS0122855;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000018.1 1 2268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000018.1 RefSeq region 1 2268 . + . ID=NZ_JJLK01000018.1:1..2268;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000018.1 RefSeq gene 1 213 . + . ID=gene-AD12_RS22535;Name=AD12_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22535;old_locus_tag=AD12_4996;partial=true;start_range=.,1 NZ_JJLK01000018.1 Protein Homology CDS 1 213 . + 0 ID=cds-WP_001509541.1;Parent=gene-AD12_RS22535;Dbxref=GenBank:WP_001509541.1;Name=WP_001509541.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD12_RS22535;partial=true;product=integrase core domain-containing protein;protein_id=WP_001509541.1;start_range=.,1;transl_table=11 NZ_JJLK01000018.1 RefSeq gene 1100 1972 . + . ID=gene-AD12_RS22530;Name=AD12_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22530;old_locus_tag=AD12_4998 NZ_JJLK01000018.1 Protein Homology CDS 1100 1972 . + 0 ID=cds-WP_000241617.1;Parent=gene-AD12_RS22530;Dbxref=GenBank:WP_000241617.1;Name=WP_000241617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767894.1;locus_tag=AD12_RS22530;product=hypothetical protein;protein_id=WP_000241617.1;transl_table=11 NZ_JJLK01000018.1 RefSeq pseudogene 2071 2268 . + . ID=gene-AD12_RS22525;Name=AD12_RS22525;end_range=2268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22525;old_locus_tag=AD12_4999;partial=true;pseudo=true NZ_JJLK01000018.1 Protein Homology CDS 2071 2268 . + 0 ID=cds-AD12_RS22525;Parent=gene-AD12_RS22525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AD12_RS22525;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000019.1 1 1010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000019.1 RefSeq region 1 1010 . + . ID=NZ_JJLK01000019.1:1..1010;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000019.1 RefSeq pseudogene 1 1010 . + . ID=gene-AD12_RS22520;Name=AD12_RS22520;end_range=1010,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22520;old_locus_tag=AD12_5000;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000019.1 Protein Homology CDS 1 1010 . + 2 ID=cds-AD12_RS22520;Parent=gene-AD12_RS22520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=AD12_RS22520;partial=true;product=RHS element protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000020.1 1 3160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000020.1 RefSeq region 1 3160 . + . ID=NZ_JJLK01000020.1:1..3160;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000020.1 RefSeq pseudogene 1 299 . - . ID=gene-AD12_RS0122860;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=pseudogene;locus_tag=AD12_RS0122860;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000020.1 Protein Homology CDS 1 299 . - 0 ID=cds-AD12_RS0122860;Parent=gene-AD12_RS0122860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AD12_RS0122860;partial=true;product=iron/manganese ABC transporter substrate-binding protein SitA;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000020.1 RefSeq gene 884 1318 . - . ID=gene-AD12_RS22515;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AD12_RS22515;old_locus_tag=AD12_5002 NZ_JJLK01000020.1 Protein Homology CDS 884 1318 . - 0 ID=cds-WP_001082294.1;Parent=gene-AD12_RS22515;Dbxref=GenBank:WP_001082294.1;Name=WP_001082294.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AD12_RS22515;product=universal stress protein UspF;protein_id=WP_001082294.1;transl_table=11 NZ_JJLK01000020.1 RefSeq gene 1459 2592 . - . ID=gene-AD12_RS22510;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AD12_RS22510;old_locus_tag=AD12_5003 NZ_JJLK01000020.1 Protein Homology CDS 1459 2592 . - 0 ID=cds-WP_000837924.1;Parent=gene-AD12_RS22510;Dbxref=GenBank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AD12_RS22510;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11 NZ_JJLK01000020.1 RefSeq gene 2960 3160 . - . ID=gene-AD12_RS22505;Name=AD12_RS22505;end_range=3160,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22505;old_locus_tag=AD12_5004;partial=true NZ_JJLK01000020.1 Protein Homology CDS 2960 3160 . - 0 ID=cds-WP_032286261.1;Parent=gene-AD12_RS22505;Dbxref=GenBank:WP_032286261.1;Name=WP_032286261.1;end_range=3160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310027.1;locus_tag=AD12_RS22505;partial=true;product=hypothetical protein;protein_id=WP_032286261.1;transl_table=11 ##sequence-region NZ_JJLK01000021.1 1 442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000021.1 RefSeq region 1 442 . + . ID=NZ_JJLK01000021.1:1..442;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000021.1 RefSeq gene 9 124 . - . ID=gene-AD12_RS22500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS22500;old_locus_tag=AD12_5005 NZ_JJLK01000021.1 cmsearch rRNA 9 124 . - . ID=rna-AD12_RS22500;Parent=gene-AD12_RS22500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22500;product=5S ribosomal RNA NZ_JJLK01000021.1 cmsearch exon 9 124 . - . ID=exon-AD12_RS22500-1;Parent=rna-AD12_RS22500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22500;product=5S ribosomal RNA NZ_JJLK01000021.1 RefSeq gene 164 239 . - . ID=gene-AD12_RS22495;Name=AD12_RS22495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS22495;old_locus_tag=AD12_5006 NZ_JJLK01000021.1 tRNAscan-SE tRNA 164 239 . - . ID=rna-AD12_RS22495;Parent=gene-AD12_RS22495;anticodon=(pos:complement(204..206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS22495;product=tRNA-Thr NZ_JJLK01000021.1 tRNAscan-SE exon 164 239 . - . ID=exon-AD12_RS22495-1;Parent=rna-AD12_RS22495;anticodon=(pos:complement(204..206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS22495;product=tRNA-Thr NZ_JJLK01000021.1 RefSeq gene 254 369 . - . ID=gene-AD12_RS22490;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS22490;old_locus_tag=AD12_5007 NZ_JJLK01000021.1 cmsearch rRNA 254 369 . - . ID=rna-AD12_RS22490;Parent=gene-AD12_RS22490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22490;product=5S ribosomal RNA NZ_JJLK01000021.1 cmsearch exon 254 369 . - . ID=exon-AD12_RS22490-1;Parent=rna-AD12_RS22490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22490;product=5S ribosomal RNA ##sequence-region NZ_JJLK01000022.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000022.1 RefSeq region 1 462 . + . ID=NZ_JJLK01000022.1:1..462;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000022.1 RefSeq gene 1 83 . + . ID=gene-AD12_RS25715;Name=AD12_RS25715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25715;partial=true;start_range=.,1 NZ_JJLK01000022.1 cmsearch ncRNA 1 83 . + . ID=rna-AD12_RS25715;Parent=gene-AD12_RS25715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25715;partial=true;product=RtT sRNA;start_range=.,1 NZ_JJLK01000022.1 cmsearch exon 1 83 . + . ID=exon-AD12_RS25715-1;Parent=rna-AD12_RS25715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25715;partial=true;product=RtT sRNA;start_range=.,1 NZ_JJLK01000022.1 RefSeq gene 130 261 . + . ID=gene-AD12_RS25605;Name=AD12_RS25605;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25605 NZ_JJLK01000022.1 cmsearch ncRNA 130 261 . + . ID=rna-AD12_RS25605;Parent=gene-AD12_RS25605;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25605;product=RtT sRNA NZ_JJLK01000022.1 cmsearch exon 130 261 . + . ID=exon-AD12_RS25605-1;Parent=rna-AD12_RS25605;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25605;product=RtT sRNA NZ_JJLK01000022.1 RefSeq gene 308 439 . + . ID=gene-AD12_RS25610;Name=AD12_RS25610;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25610 NZ_JJLK01000022.1 cmsearch ncRNA 308 439 . + . ID=rna-AD12_RS25610;Parent=gene-AD12_RS25610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25610;product=RtT sRNA NZ_JJLK01000022.1 cmsearch exon 308 439 . + . ID=exon-AD12_RS25610-1;Parent=rna-AD12_RS25610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25610;product=RtT sRNA ##sequence-region NZ_JJLK01000023.1 1 1937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000023.1 RefSeq region 1 1937 . + . ID=NZ_JJLK01000023.1:1..1937;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000023.1 RefSeq gene 52 321 . - . ID=gene-AD12_RS22485;Name=AD12_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22485;old_locus_tag=AD12_5010 NZ_JJLK01000023.1 Protein Homology CDS 52 321 . - 0 ID=cds-WP_001295263.1;Parent=gene-AD12_RS22485;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AD12_RS22485;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJLK01000023.1 RefSeq gene 391 975 . + . ID=gene-AD12_RS22480;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AD12_RS22480;old_locus_tag=AD12_5011 NZ_JJLK01000023.1 Protein Homology CDS 391 975 . + 0 ID=cds-WP_001052181.1;Parent=gene-AD12_RS22480;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AD12_RS22480;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JJLK01000023.1 RefSeq gene 957 1484 . + . ID=gene-AD12_RS22475;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AD12_RS22475;old_locus_tag=AD12_5012 NZ_JJLK01000023.1 Protein Homology CDS 957 1484 . + 0 ID=cds-WP_000907622.1;Parent=gene-AD12_RS22475;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AD12_RS22475;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJLK01000023.1 RefSeq gene 1588 1703 . - . ID=gene-AD12_RS22470;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS22470;old_locus_tag=AD12_5013 NZ_JJLK01000023.1 cmsearch rRNA 1588 1703 . - . ID=rna-AD12_RS22470;Parent=gene-AD12_RS22470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22470;product=5S ribosomal RNA NZ_JJLK01000023.1 cmsearch exon 1588 1703 . - . ID=exon-AD12_RS22470-1;Parent=rna-AD12_RS22470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22470;product=5S ribosomal RNA NZ_JJLK01000023.1 RefSeq gene 1743 1818 . - . ID=gene-AD12_RS22465;Name=AD12_RS22465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS22465;old_locus_tag=AD12_5014 NZ_JJLK01000023.1 tRNAscan-SE tRNA 1743 1818 . - . ID=rna-AD12_RS22465;Parent=gene-AD12_RS22465;anticodon=(pos:complement(1783..1785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS22465;product=tRNA-Thr NZ_JJLK01000023.1 tRNAscan-SE exon 1743 1818 . - . ID=exon-AD12_RS22465-1;Parent=rna-AD12_RS22465;anticodon=(pos:complement(1783..1785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS22465;product=tRNA-Thr NZ_JJLK01000023.1 RefSeq gene 1833 1937 . - . ID=gene-AD12_RS22460;Name=rrf;end_range=1937,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS22460;old_locus_tag=AD12_5015;partial=true NZ_JJLK01000023.1 cmsearch rRNA 1833 1937 . - . ID=rna-AD12_RS22460;Parent=gene-AD12_RS22460;Dbxref=RFAM:RF00001;end_range=1937,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22460;partial=true;product=5S ribosomal RNA NZ_JJLK01000023.1 cmsearch exon 1833 1937 . - . ID=exon-AD12_RS22460-1;Parent=rna-AD12_RS22460;Dbxref=RFAM:RF00001;end_range=1937,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS22460;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JJLK01000024.1 1 5919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000024.1 RefSeq region 1 5919 . + . ID=NZ_JJLK01000024.1:1..5919;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000024.1 RefSeq gene 7 492 . - . ID=gene-AD12_RS22455;Name=AD12_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22455;old_locus_tag=AD12_5016 NZ_JJLK01000024.1 Protein Homology CDS 7 492 . - 0 ID=cds-WP_032286264.1;Parent=gene-AD12_RS22455;Dbxref=GenBank:WP_032286264.1;Name=WP_032286264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AD12_RS22455;product=antirestriction protein;protein_id=WP_032286264.1;transl_table=11 NZ_JJLK01000024.1 RefSeq gene 547 1365 . - . ID=gene-AD12_RS22450;Name=AD12_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22450;old_locus_tag=AD12_5017 NZ_JJLK01000024.1 Protein Homology CDS 547 1365 . - 0 ID=cds-WP_024219931.1;Parent=gene-AD12_RS22450;Dbxref=GenBank:WP_024219931.1;Name=WP_024219931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AD12_RS22450;product=DUF932 domain-containing protein;protein_id=WP_024219931.1;transl_table=11 NZ_JJLK01000024.1 RefSeq gene 1465 1698 . - . ID=gene-AD12_RS0122880;Name=AD12_RS0122880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122880 NZ_JJLK01000024.1 Protein Homology CDS 1465 1698 . - 0 ID=cds-WP_001119729.1;Parent=gene-AD12_RS0122880;Dbxref=GenBank:WP_001119729.1;Name=WP_001119729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001119724.1;locus_tag=AD12_RS0122880;product=DUF905 family protein;protein_id=WP_001119729.1;transl_table=11 NZ_JJLK01000024.1 RefSeq gene 1777 2232 . - . ID=gene-AD12_RS22445;Name=AD12_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22445;old_locus_tag=AD12_5019 NZ_JJLK01000024.1 Protein Homology CDS 1777 2232 . - 0 ID=cds-WP_032286265.1;Parent=gene-AD12_RS22445;Dbxref=GenBank:WP_032286265.1;Name=WP_032286265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708767.1;locus_tag=AD12_RS22445;product=IrmA family protein;protein_id=WP_032286265.1;transl_table=11 NZ_JJLK01000024.1 RefSeq pseudogene 2308 4824 . - . ID=gene-AD12_RS0122885;Name=AD12_RS0122885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0122885;pseudo=true NZ_JJLK01000024.1 Protein Homology CDS 2308 4824 . - 0 ID=cds-AD12_RS0122885;Parent=gene-AD12_RS0122885;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708766.2;locus_tag=AD12_RS0122885;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000024.1 RefSeq gene 4943 5919 . - . ID=gene-AD12_RS22440;Name=AD12_RS22440;end_range=5919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22440;old_locus_tag=AD12_5022;partial=true NZ_JJLK01000024.1 Protein Homology CDS 4943 5919 . - 2 ID=cds-WP_032286266.1;Parent=gene-AD12_RS22440;Dbxref=GenBank:WP_032286266.1;Name=WP_032286266.1;end_range=5919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AD12_RS22440;partial=true;product=autotransporter domain-containing protein;protein_id=WP_032286266.1;transl_table=11 ##sequence-region NZ_JJLK01000025.1 1 495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000025.1 RefSeq region 1 495 . + . ID=NZ_JJLK01000025.1:1..495;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000025.1 RefSeq pseudogene 1 411 . - . ID=gene-AD12_RS22435;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=pseudogene;locus_tag=AD12_RS22435;old_locus_tag=AD12_5023;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000025.1 Protein Homology CDS 1 411 . - 0 ID=cds-AD12_RS22435;Parent=gene-AD12_RS22435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707261.1;locus_tag=AD12_RS22435;partial=true;product=iron/manganese ABC transporter ATP-binding protein SitB;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000026.1 1 8241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000026.1 RefSeq region 1 8241 . + . ID=NZ_JJLK01000026.1:1..8241;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000026.1 RefSeq gene 1 718 . + . ID=gene-AD12_RS22430;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=AD12_RS22430;old_locus_tag=AD12_5024;partial=true;start_range=.,1 NZ_JJLK01000026.1 Protein Homology CDS 1 718 . + 1 ID=cds-WP_032286269.1;Parent=gene-AD12_RS22430;Dbxref=GenBank:WP_032286269.1;Name=WP_032286269.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707259.1;locus_tag=AD12_RS22430;partial=true;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_032286269.1;start_range=.,1;transl_table=11 NZ_JJLK01000026.1 RefSeq gene 1174 2505 . + . ID=gene-AD12_RS22425;Name=AD12_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22425;old_locus_tag=AD12_5025 NZ_JJLK01000026.1 Protein Homology CDS 1174 2505 . + 0 ID=cds-WP_024046390.1;Parent=gene-AD12_RS22425;Dbxref=GenBank:WP_024046390.1;Name=WP_024046390.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586336.1;locus_tag=AD12_RS22425;product=sensor domain-containing diguanylate cyclase;protein_id=WP_024046390.1;transl_table=11 NZ_JJLK01000026.1 RefSeq gene 2579 3163 . - . ID=gene-AD12_RS22420;Name=AD12_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22420;old_locus_tag=AD12_5026 NZ_JJLK01000026.1 Protein Homology CDS 2579 3163 . - 0 ID=cds-WP_032286270.1;Parent=gene-AD12_RS22420;Dbxref=GenBank:WP_032286270.1;Name=WP_032286270.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AD12_RS22420;product=tail fiber assembly protein;protein_id=WP_032286270.1;transl_table=11 NZ_JJLK01000026.1 RefSeq gene 3163 6189 . - . ID=gene-AD12_RS25930;Name=AD12_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS25930 NZ_JJLK01000026.1 Protein Homology CDS 3163 6189 . - 0 ID=cds-WP_071999178.1;Parent=gene-AD12_RS25930;Dbxref=GenBank:WP_071999178.1;Name=WP_071999178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244352.1;locus_tag=AD12_RS25930;product=phage tail protein;protein_id=WP_071999178.1;transl_table=11 NZ_JJLK01000026.1 RefSeq gene 6254 6853 . - . ID=gene-AD12_RS22400;Name=AD12_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22400;old_locus_tag=AD12_5031 NZ_JJLK01000026.1 Protein Homology CDS 6254 6853 . - 0 ID=cds-WP_032286272.1;Parent=gene-AD12_RS22400;Dbxref=GenBank:WP_032286272.1;Name=WP_032286272.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AD12_RS22400;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032286272.1;transl_table=11 NZ_JJLK01000026.1 RefSeq gene 6924 8241 . - . ID=gene-AD12_RS22395;Name=AD12_RS22395;end_range=8241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22395;old_locus_tag=AD12_5032;partial=true NZ_JJLK01000026.1 Protein Homology CDS 6924 8241 . - 1 ID=cds-WP_032286273.1;Parent=gene-AD12_RS22395;Dbxref=GenBank:WP_032286273.1;Name=WP_032286273.1;end_range=8241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308869.1;locus_tag=AD12_RS22395;partial=true;product=phage tail tip domain-containing protein;protein_id=WP_032286273.1;transl_table=11 ##sequence-region NZ_JJLK01000027.1 1 1288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000027.1 RefSeq region 1 1288 . + . ID=NZ_JJLK01000027.1:1..1288;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000027.1 RefSeq gene 12 1240 . - . ID=gene-AD12_RS0122890;Name=AD12_RS0122890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122890 NZ_JJLK01000027.1 Protein Homology CDS 925 1240 . - 0 ID=cds-WP_106121298.1;Parent=gene-AD12_RS0122890;Dbxref=GenBank:WP_106121298.1;Name=WP_106121298.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD12_RS0122890;product=IS3-like element IS2 family transposase;protein_id=WP_106121298.1;transl_table=11 NZ_JJLK01000027.1 Protein Homology CDS 12 925 . - 2 ID=cds-WP_106121298.1;Parent=gene-AD12_RS0122890;Dbxref=GenBank:WP_106121298.1;Name=WP_106121298.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD12_RS0122890;product=IS3-like element IS2 family transposase;protein_id=WP_106121298.1;transl_table=11 ##sequence-region NZ_JJLK01000028.1 1 10807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000028.1 RefSeq region 1 10807 . + . ID=NZ_JJLK01000028.1:1..10807;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000028.1 RefSeq pseudogene 1 1042 . + . ID=gene-AD12_RS22385;Name=AD12_RS22385;end_range=1042,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22385;old_locus_tag=AD12_5035;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000028.1 Protein Homology CDS 1 1042 . + 1 ID=cds-AD12_RS22385;Parent=gene-AD12_RS22385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1042,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD12_RS22385;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 1189 2049 . - . ID=gene-AD12_RS22380;Name=AD12_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22380;old_locus_tag=AD12_5036 NZ_JJLK01000028.1 Protein Homology CDS 1189 2049 . - 0 ID=cds-WP_000027057.1;Parent=gene-AD12_RS22380;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD12_RS22380;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 2232 2789 . - . ID=gene-AD12_RS22375;Name=AD12_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22375;old_locus_tag=AD12_5037 NZ_JJLK01000028.1 Protein Homology CDS 2232 2789 . - 0 ID=cds-WP_001235713.1;Parent=gene-AD12_RS22375;Dbxref=GenBank:WP_001235713.1;Name=WP_001235713.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AD12_RS22375;product=recombinase family protein;protein_id=WP_001235713.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 2953 5958 . + . ID=gene-AD12_RS22370;Name=AD12_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22370;old_locus_tag=AD12_5038 NZ_JJLK01000028.1 Protein Homology CDS 2953 5958 . + 0 ID=cds-WP_032258744.1;Parent=gene-AD12_RS22370;Dbxref=GenBank:WP_032258744.1;Name=WP_032258744.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AD12_RS22370;product=Tn3-like element Tn3 family transposase;protein_id=WP_032258744.1;transl_table=11 NZ_JJLK01000028.1 RefSeq pseudogene 5992 6708 . + . ID=gene-AD12_RS22365;Name=AD12_RS22365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22365;old_locus_tag=AD12_5039;partial=true;pseudo=true;start_range=.,5992 NZ_JJLK01000028.1 Protein Homology CDS 5992 6708 . + 0 ID=cds-AD12_RS22365;Parent=gene-AD12_RS22365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD12_RS22365;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,5992;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 6705 6875 . - . ID=gene-AD12_RS29385;Name=AD12_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29385 NZ_JJLK01000028.1 Protein Homology CDS 6705 6875 . - 0 ID=cds-WP_001531603.1;Parent=gene-AD12_RS29385;Dbxref=GenBank:WP_001531603.1;Name=WP_001531603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=AD12_RS29385;product=DUF6404 family protein;protein_id=WP_001531603.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 7004 7339 . + . ID=gene-AD12_RS22360;Name=AD12_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22360;old_locus_tag=AD12_5041 NZ_JJLK01000028.1 Protein Homology CDS 7004 7339 . + 0 ID=cds-WP_001080729.1;Parent=gene-AD12_RS22360;Dbxref=GenBank:WP_001080729.1;Name=WP_001080729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080726.1;locus_tag=AD12_RS22360;product=colicin 1A immunity protein;protein_id=WP_001080729.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 7361 9241 . - . ID=gene-AD12_RS0122895;Name=AD12_RS0122895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122895 NZ_JJLK01000028.1 Protein Homology CDS 7361 9241 . - 0 ID=cds-WP_001283335.1;Parent=gene-AD12_RS0122895;Dbxref=GenBank:WP_001283335.1;Name=WP_001283335.1;Ontology_term=GO:0019835,GO:0031640,GO:0050829,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytolysis|0019835||IEA,killing of cells of another organism|0031640||IEA,defense response to Gram-negative bacterium|0050829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610315.1;locus_tag=AD12_RS0122895;product=colicin Ia central receptor-binding domain-containing protein;protein_id=WP_001283335.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 9427 10275 . - . ID=gene-AD12_RS22355;Name=AD12_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22355;old_locus_tag=AD12_5045 NZ_JJLK01000028.1 Protein Homology CDS 9427 10275 . - 0 ID=cds-WP_001057989.1;Parent=gene-AD12_RS22355;Dbxref=GenBank:WP_001057989.1;Name=WP_001057989.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057990.1;locus_tag=AD12_RS22355;product=3'-5' exonuclease;protein_id=WP_001057989.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 10321 10599 . - . ID=gene-AD12_RS22350;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=protein_coding;locus_tag=AD12_RS22350;old_locus_tag=AD12_5046 NZ_JJLK01000028.1 Protein Homology CDS 10321 10599 . - 0 ID=cds-WP_001384452.1;Parent=gene-AD12_RS22350;Dbxref=GenBank:WP_001384452.1;Name=WP_001384452.1;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=AD12_RS22350;product=type II toxin-antitoxin system toxin YacB;protein_id=WP_001384452.1;transl_table=11 NZ_JJLK01000028.1 RefSeq gene 10599 10807 . - . ID=gene-AD12_RS0122900;Name=yacA;end_range=10807,.;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AD12_RS0122900;old_locus_tag=AD12_5047;partial=true NZ_JJLK01000028.1 Protein Homology CDS 10599 10807 . - 2 ID=cds-WP_001773513.1;Parent=gene-AD12_RS0122900;Dbxref=GenBank:WP_001773513.1;Name=WP_001773513.1;end_range=10807,.;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AD12_RS0122900;partial=true;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_001773513.1;transl_table=11 ##sequence-region NZ_JJLK01000029.1 1 1271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000029.1 RefSeq region 1 1271 . + . ID=NZ_JJLK01000029.1:1..1271;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000029.1 RefSeq gene 1 1271 . + . ID=gene-AD12_RS0122905;Name=AD12_RS0122905;end_range=1271,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122905;old_locus_tag=AD12_5048;partial=true;start_range=.,1 NZ_JJLK01000029.1 Protein Homology CDS 1 1271 . + 0 ID=cds-WP_187439328.1;Parent=gene-AD12_RS0122905;Dbxref=GenBank:WP_187439328.1;Name=WP_187439328.1;end_range=1271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696854.1;locus_tag=AD12_RS0122905;partial=true;product=AIDA repeat-containing protein;protein_id=WP_187439328.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000030.1 1 17104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000030.1 RefSeq region 1 17104 . + . ID=NZ_JJLK01000030.1:1..17104;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000030.1 RefSeq gene 1 285 . - . ID=gene-AD12_RS22345;Name=AD12_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22345;old_locus_tag=AD12_5049;partial=true;start_range=.,1 NZ_JJLK01000030.1 Protein Homology CDS 1 285 . - 0 ID=cds-WP_032286276.1;Parent=gene-AD12_RS22345;Dbxref=GenBank:WP_032286276.1;Name=WP_032286276.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD12_RS22345;partial=true;product=transposase;protein_id=WP_032286276.1;start_range=.,1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 912 1205 . + . ID=gene-AD12_RS22340;Name=iss;gbkey=Gene;gene=iss;gene_biotype=protein_coding;locus_tag=AD12_RS22340;old_locus_tag=AD12_5050 NZ_JJLK01000030.1 Protein Homology CDS 912 1205 . + 0 ID=cds-WP_000738422.1;Parent=gene-AD12_RS22340;Dbxref=GenBank:WP_000738422.1;Name=WP_000738422.1;gbkey=CDS;gene=iss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309652.1;locus_tag=AD12_RS22340;product=increased serum survival lipoprotein Iss;protein_id=WP_000738422.1;transl_table=11 NZ_JJLK01000030.1 RefSeq pseudogene 1289 1437 . - . ID=gene-AD12_RS25955;Name=AD12_RS25955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS25955;partial=true;pseudo=true;start_range=.,1289 NZ_JJLK01000030.1 Protein Homology CDS 1289 1437 . - 0 ID=cds-AD12_RS25955;Parent=gene-AD12_RS25955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309651.1;locus_tag=AD12_RS25955;partial=true;product=Rz1 family lipoprotein;pseudo=true;start_range=.,1289;transl_table=11 NZ_JJLK01000030.1 RefSeq pseudogene 1397 1501 . - . ID=gene-AD12_RS29840;Name=AD12_RS29840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29840;partial=true;pseudo=true;start_range=.,1397 NZ_JJLK01000030.1 Protein Homology CDS 1397 1501 . - 0 ID=cds-AD12_RS29840;Parent=gene-AD12_RS29840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019835,GO:0044659;gbkey=CDS;go_process=cytolysis|0019835||IEA,viral release from host cell by cytolysis|0044659||IEA;inference=COORDINATES: protein motif:HMM:NF015218.6;locus_tag=AD12_RS29840;partial=true;product=lysis system i-spanin subunit Rz;pseudo=true;start_range=.,1397;transl_table=11 NZ_JJLK01000030.1 RefSeq pseudogene 2016 3040 . + . ID=gene-AD12_RS27795;Name=AD12_RS27795;end_range=3040,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27795;partial=true;pseudo=true NZ_JJLK01000030.1 Protein Homology CDS 2016 3040 . + 0 ID=cds-AD12_RS27795;Parent=gene-AD12_RS27795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074;end_range=3040,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001178371.1;locus_tag=AD12_RS27795;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 4351 5466 . + . ID=gene-AD12_RS22325;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=AD12_RS22325;old_locus_tag=AD12_5057 NZ_JJLK01000030.1 Protein Homology CDS 4351 5466 . + 0 ID=cds-WP_032252734.1;Parent=gene-AD12_RS22325;Dbxref=GenBank:WP_032252734.1;Name=WP_032252734.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=AD12_RS22325;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_032252734.1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 5606 9265 . + . ID=gene-AD12_RS22320;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=AD12_RS22320;old_locus_tag=AD12_5058 NZ_JJLK01000030.1 Protein Homology CDS 5606 9265 . + 0 ID=cds-WP_001442133.1;Parent=gene-AD12_RS22320;Dbxref=GenBank:WP_001442133.1;Name=WP_001442133.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318221.1;locus_tag=AD12_RS22320;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_001442133.1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 9369 10598 . + . ID=gene-AD12_RS22315;Name=iroD;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=AD12_RS22315;old_locus_tag=AD12_5059 NZ_JJLK01000030.1 Protein Homology CDS 9369 10598 . + 0 ID=cds-WP_000933672.1;Parent=gene-AD12_RS22315;Dbxref=GenBank:WP_000933672.1;Name=WP_000933672.1;gbkey=CDS;gene=iroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933675.1;locus_tag=AD12_RS22315;product=catecholate siderophore esterase IroD;protein_id=WP_000933672.1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 10683 11639 . + . ID=gene-AD12_RS22310;Name=iroE;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=AD12_RS22310;old_locus_tag=AD12_5060 NZ_JJLK01000030.1 Protein Homology CDS 10683 11639 . + 0 ID=cds-WP_000271277.1;Parent=gene-AD12_RS22310;Dbxref=GenBank:WP_000271277.1;Name=WP_000271277.1;gbkey=CDS;gene=iroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271276.1;locus_tag=AD12_RS22310;product=catecholate siderophore esterase IroE;protein_id=WP_000271277.1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 11684 13861 . - . ID=gene-AD12_RS22305;Name=iroN;gbkey=Gene;gene=iroN;gene_biotype=protein_coding;locus_tag=AD12_RS22305;old_locus_tag=AD12_5061 NZ_JJLK01000030.1 Protein Homology CDS 11684 13861 . - 0 ID=cds-WP_001222186.1;Parent=gene-AD12_RS22305;Dbxref=GenBank:WP_001222186.1;Name=WP_001222186.1;gbkey=CDS;gene=iroN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222186.1;locus_tag=AD12_RS22305;product=siderophore salmochelin receptor IroN;protein_id=WP_001222186.1;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 14716 15750 . - . ID=gene-AD12_RS22300;Name=AD12_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22300;old_locus_tag=AD12_5062 NZ_JJLK01000030.1 Protein Homology CDS 14716 15750 . - 0 ID=cds-WP_001190234.1;Parent=gene-AD12_RS22300;Dbxref=GenBank:WP_001190234.1;Name=WP_001190234.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335133.1;locus_tag=AD12_RS22300;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_001190234.1;transl_table=11 NZ_JJLK01000030.1 RefSeq pseudogene 15931 16232 . + . ID=gene-AD12_RS29390;Name=AD12_RS29390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29390;partial=true;pseudo=true;start_range=.,15931 NZ_JJLK01000030.1 Protein Homology CDS 15931 16232 . + 0 ID=cds-AD12_RS29390;Parent=gene-AD12_RS29390;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542561.1;locus_tag=AD12_RS29390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,15931;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 16310 16603 . - . ID=gene-AD12_RS22295;Name=AD12_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22295;old_locus_tag=AD12_5063 NZ_JJLK01000030.1 Protein Homology CDS 16310 16603 . - 0 ID=cds-WP_000269327.1;Parent=gene-AD12_RS22295;Dbxref=GenBank:WP_000269327.1;Name=WP_000269327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269327.1;locus_tag=AD12_RS22295;product=DUF6404 family protein;protein_id=WP_000269327.1;transl_table=11 NZ_JJLK01000030.1 RefSeq pseudogene 16771 16896 . - . ID=gene-AD12_RS22290;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=pseudogene;locus_tag=AD12_RS22290;old_locus_tag=AD12_5064;partial=true;pseudo=true;start_range=.,16771 NZ_JJLK01000030.1 Protein Homology CDS 16771 16896 . - 0 ID=cds-AD12_RS22290;Parent=gene-AD12_RS22290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=AD12_RS22290;partial=true;product=type II toxin-antitoxin system toxin YacB;pseudo=true;start_range=.,16771;transl_table=11 NZ_JJLK01000030.1 RefSeq gene 16896 17104 . - . ID=gene-AD12_RS0122925;Name=yacA;end_range=17104,.;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AD12_RS0122925;old_locus_tag=AD12_5065;partial=true NZ_JJLK01000030.1 Protein Homology CDS 16896 17104 . - 2 ID=cds-WP_001773513.1-2;Parent=gene-AD12_RS0122925;Dbxref=GenBank:WP_001773513.1;Name=WP_001773513.1;end_range=17104,.;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AD12_RS0122925;partial=true;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_001773513.1;transl_table=11 ##sequence-region NZ_JJLK01000031.1 1 3000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000031.1 RefSeq region 1 3000 . + . ID=NZ_JJLK01000031.1:1..3000;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000031.1 RefSeq gene 7 480 . - . ID=gene-AD12_RS22285;Name=AD12_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22285;old_locus_tag=AD12_5066 NZ_JJLK01000031.1 Protein Homology CDS 7 480 . - 0 ID=cds-WP_001411480.1;Parent=gene-AD12_RS22285;Dbxref=GenBank:WP_001411480.1;Name=WP_001411480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AD12_RS22285;product=antirestriction protein;protein_id=WP_001411480.1;transl_table=11 NZ_JJLK01000031.1 RefSeq gene 574 822 . - . ID=gene-AD12_RS0122935;Name=AD12_RS0122935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0122935 NZ_JJLK01000031.1 GeneMarkS-2+ CDS 574 822 . - 0 ID=cds-WP_032286278.1;Parent=gene-AD12_RS0122935;Dbxref=GenBank:WP_032286278.1;Name=WP_032286278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS0122935;product=hypothetical protein;protein_id=WP_032286278.1;transl_table=11 NZ_JJLK01000031.1 RefSeq gene 822 1640 . - . ID=gene-AD12_RS22280;Name=AD12_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22280;old_locus_tag=AD12_5067 NZ_JJLK01000031.1 Protein Homology CDS 822 1640 . - 0 ID=cds-WP_032286280.1;Parent=gene-AD12_RS22280;Dbxref=GenBank:WP_032286280.1;Name=WP_032286280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AD12_RS22280;product=DUF932 domain-containing protein;protein_id=WP_032286280.1;transl_table=11 NZ_JJLK01000031.1 RefSeq pseudogene 1758 1953 . - . ID=gene-AD12_RS22275;Name=AD12_RS22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22275;old_locus_tag=AD12_5068;pseudo=true NZ_JJLK01000031.1 Protein Homology CDS 1758 1953 . - 0 ID=cds-AD12_RS22275;Parent=gene-AD12_RS22275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117568.1;locus_tag=AD12_RS22275;product=DUF905 family protein;pseudo=true;transl_table=11 NZ_JJLK01000031.1 RefSeq gene 2024 3000 . - . ID=gene-AD12_RS22270;Name=AD12_RS22270;end_range=3000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22270;old_locus_tag=AD12_5069;partial=true NZ_JJLK01000031.1 Protein Homology CDS 2024 3000 . - 2 ID=cds-WP_032286281.1;Parent=gene-AD12_RS22270;Dbxref=GenBank:WP_032286281.1;Name=WP_032286281.1;end_range=3000,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AD12_RS22270;partial=true;product=autotransporter domain-containing protein;protein_id=WP_032286281.1;transl_table=11 ##sequence-region NZ_JJLK01000032.1 1 20103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000032.1 RefSeq region 1 20103 . + . ID=NZ_JJLK01000032.1:1..20103;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000032.1 RefSeq gene 1 360 . + . ID=gene-AD12_RS22265;Name=AD12_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22265;old_locus_tag=AD12_5070;partial=true;start_range=.,1 NZ_JJLK01000032.1 Protein Homology CDS 1 360 . + 0 ID=cds-WP_032179854.1;Parent=gene-AD12_RS22265;Dbxref=GenBank:WP_032179854.1;Name=WP_032179854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082741.1;locus_tag=AD12_RS22265;partial=true;product=lysis protein;protein_id=WP_032179854.1;start_range=.,1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 498 1955 . + . ID=gene-AD12_RS22260;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=protein_coding;locus_tag=AD12_RS22260;old_locus_tag=AD12_5071 NZ_JJLK01000032.1 Protein Homology CDS 498 1955 . + 0 ID=cds-WP_024165216.1;Parent=gene-AD12_RS22260;Dbxref=GenBank:WP_024165216.1;Name=WP_024165216.1;gbkey=CDS;gene=trkG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415881.1;locus_tag=AD12_RS22260;product=Trk system potassium transporter TrkG;protein_id=WP_024165216.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 2093 2884 . + . ID=gene-AD12_RS29640;Name=AD12_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29640;old_locus_tag=AD12_5072 NZ_JJLK01000032.1 Protein Homology CDS 2093 2884 . + 0 ID=cds-WP_032286282.1;Parent=gene-AD12_RS29640;Dbxref=GenBank:WP_032286282.1;Name=WP_032286282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415883.1;locus_tag=AD12_RS29640;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_032286282.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 2877 3809 . + . ID=gene-AD12_RS22250;Name=AD12_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22250;old_locus_tag=AD12_5073 NZ_JJLK01000032.1 Protein Homology CDS 2877 3809 . + 0 ID=cds-WP_032286283.1;Parent=gene-AD12_RS22250;Dbxref=GenBank:WP_032286283.1;Name=WP_032286283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204026.1;locus_tag=AD12_RS22250;product=hypothetical protein;protein_id=WP_032286283.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 3787 3996 . + . ID=gene-AD12_RS22245;Name=AD12_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22245;old_locus_tag=AD12_5074 NZ_JJLK01000032.1 Protein Homology CDS 3787 3996 . + 0 ID=cds-WP_000126788.1;Parent=gene-AD12_RS22245;Dbxref=GenBank:WP_000126788.1;Name=WP_000126788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126789.1;locus_tag=AD12_RS22245;product=hypothetical protein;protein_id=WP_000126788.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 4000 5094 . + . ID=gene-AD12_RS22240;Name=AD12_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22240;old_locus_tag=AD12_5075 NZ_JJLK01000032.1 Protein Homology CDS 4000 5094 . + 0 ID=cds-WP_000089446.1;Parent=gene-AD12_RS22240;Dbxref=GenBank:WP_000089446.1;Name=WP_000089446.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089437.1;locus_tag=AD12_RS22240;product=terminase small subunit;protein_id=WP_000089446.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 5075 6376 . + . ID=gene-AD12_RS22235;Name=AD12_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22235;old_locus_tag=AD12_5076 NZ_JJLK01000032.1 Protein Homology CDS 5075 6376 . + 0 ID=cds-WP_024208189.1;Parent=gene-AD12_RS22235;Dbxref=GenBank:WP_024208189.1;Name=WP_024208189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625349.1;locus_tag=AD12_RS22235;product=terminase large subunit domain-containing protein;protein_id=WP_024208189.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 6379 7785 . + . ID=gene-AD12_RS22230;Name=AD12_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22230;old_locus_tag=AD12_5077 NZ_JJLK01000032.1 Protein Homology CDS 6379 7785 . + 0 ID=cds-WP_000763702.1;Parent=gene-AD12_RS22230;Dbxref=GenBank:WP_000763702.1;Name=WP_000763702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469190.1;locus_tag=AD12_RS22230;product=DUF4055 domain-containing protein;protein_id=WP_000763702.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 7769 8881 . + . ID=gene-AD12_RS22225;Name=AD12_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22225;old_locus_tag=AD12_5078 NZ_JJLK01000032.1 Protein Homology CDS 7769 8881 . + 0 ID=cds-WP_001470067.1;Parent=gene-AD12_RS22225;Dbxref=GenBank:WP_001470067.1;Name=WP_001470067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645719.1;locus_tag=AD12_RS22225;product=phage minor head protein;protein_id=WP_001470067.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 8986 9750 . + . ID=gene-AD12_RS22220;Name=AD12_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22220;old_locus_tag=AD12_5079 NZ_JJLK01000032.1 Protein Homology CDS 8986 9750 . + 0 ID=cds-WP_032286284.1;Parent=gene-AD12_RS22220;Dbxref=GenBank:WP_032286284.1;Name=WP_032286284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770040.1;locus_tag=AD12_RS22220;product=DUF6651 domain-containing protein;protein_id=WP_032286284.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 9849 10988 . + . ID=gene-AD12_RS22215;Name=AD12_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22215;old_locus_tag=AD12_5080 NZ_JJLK01000032.1 Protein Homology CDS 9849 10988 . + 0 ID=cds-WP_000918487.1;Parent=gene-AD12_RS22215;Dbxref=GenBank:WP_000918487.1;Name=WP_000918487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918482.1;locus_tag=AD12_RS22215;product=P22 phage major capsid protein family protein;protein_id=WP_000918487.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 11031 11207 . + . ID=gene-AD12_RS28990;Name=AD12_RS28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28990;old_locus_tag=AD12_5081 NZ_JJLK01000032.1 Protein Homology CDS 11031 11207 . + 0 ID=cds-WP_000908084.1;Parent=gene-AD12_RS28990;Dbxref=GenBank:WP_000908084.1;Name=WP_000908084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121546.1;locus_tag=AD12_RS28990;product=hypothetical protein;protein_id=WP_000908084.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 11211 11606 . + . ID=gene-AD12_RS22210;Name=AD12_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22210;old_locus_tag=AD12_5082 NZ_JJLK01000032.1 Protein Homology CDS 11211 11606 . + 0 ID=cds-WP_000634211.1;Parent=gene-AD12_RS22210;Dbxref=GenBank:WP_000634211.1;Name=WP_000634211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634213.1;locus_tag=AD12_RS22210;product=hypothetical protein;protein_id=WP_000634211.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 11606 11989 . + . ID=gene-AD12_RS22205;Name=AD12_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22205;old_locus_tag=AD12_5083 NZ_JJLK01000032.1 Protein Homology CDS 11606 11989 . + 0 ID=cds-WP_000524259.1;Parent=gene-AD12_RS22205;Dbxref=GenBank:WP_000524259.1;Name=WP_000524259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231725.1;locus_tag=AD12_RS22205;product=hypothetical protein;protein_id=WP_000524259.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 11990 12370 . + . ID=gene-AD12_RS22200;Name=AD12_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22200;old_locus_tag=AD12_5084 NZ_JJLK01000032.1 Protein Homology CDS 11990 12370 . + 0 ID=cds-WP_001029819.1;Parent=gene-AD12_RS22200;Dbxref=GenBank:WP_001029819.1;Name=WP_001029819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029817.1;locus_tag=AD12_RS22200;product=hypothetical protein;protein_id=WP_001029819.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 12367 12759 . + . ID=gene-AD12_RS22195;Name=AD12_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22195;old_locus_tag=AD12_5085 NZ_JJLK01000032.1 Protein Homology CDS 12367 12759 . + 0 ID=cds-WP_000144678.1;Parent=gene-AD12_RS22195;Dbxref=GenBank:WP_000144678.1;Name=WP_000144678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121013.1;locus_tag=AD12_RS22195;product=phage tail terminator-like protein;protein_id=WP_000144678.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 12786 13748 . + . ID=gene-AD12_RS22190;Name=AD12_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22190;old_locus_tag=AD12_5086 NZ_JJLK01000032.1 Protein Homology CDS 12786 13748 . + 0 ID=cds-WP_000094292.1;Parent=gene-AD12_RS22190;Dbxref=GenBank:WP_000094292.1;Name=WP_000094292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233030.1;locus_tag=AD12_RS22190;product=phage tail tube protein;protein_id=WP_000094292.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 13899 14258 . + . ID=gene-AD12_RS22185;Name=ydaY;gbkey=Gene;gene=ydaY;gene_biotype=protein_coding;locus_tag=AD12_RS22185;old_locus_tag=AD12_5087 NZ_JJLK01000032.1 Protein Homology CDS 13899 14258 . + 0 ID=cds-WP_012565075.1;Parent=gene-AD12_RS22185;Dbxref=GenBank:WP_012565075.1;Name=WP_012565075.1;gbkey=CDS;gene=ydaY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518777.1;locus_tag=AD12_RS22185;product=protein YdaY;protein_id=WP_012565075.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 14732 17965 . + . ID=gene-AD12_RS22180;Name=AD12_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22180;old_locus_tag=AD12_5089 NZ_JJLK01000032.1 Protein Homology CDS 14732 17965 . + 0 ID=cds-WP_032286285.1;Parent=gene-AD12_RS22180;Dbxref=GenBank:WP_032286285.1;Name=WP_032286285.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231723.1;locus_tag=AD12_RS22180;product=phage tail tape measure protein;protein_id=WP_032286285.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 17958 18296 . + . ID=gene-AD12_RS22175;Name=AD12_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22175;old_locus_tag=AD12_5090 NZ_JJLK01000032.1 Protein Homology CDS 17958 18296 . + 0 ID=cds-WP_000024051.1;Parent=gene-AD12_RS22175;Dbxref=GenBank:WP_000024051.1;Name=WP_000024051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024053.1;locus_tag=AD12_RS22175;product=phage tail protein;protein_id=WP_000024051.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 18296 18994 . + . ID=gene-AD12_RS22170;Name=AD12_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22170;old_locus_tag=AD12_5091 NZ_JJLK01000032.1 Protein Homology CDS 18296 18994 . + 0 ID=cds-WP_032286286.1;Parent=gene-AD12_RS22170;Dbxref=GenBank:WP_032286286.1;Name=WP_032286286.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=AD12_RS22170;product=phage minor tail protein L;protein_id=WP_032286286.1;transl_table=11 NZ_JJLK01000032.1 RefSeq gene 19000 19743 . + . ID=gene-AD12_RS22165;Name=AD12_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22165;old_locus_tag=AD12_5092 NZ_JJLK01000032.1 Protein Homology CDS 19000 19743 . + 0 ID=cds-WP_032286287.1;Parent=gene-AD12_RS22165;Dbxref=GenBank:WP_032286287.1;Name=WP_032286287.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD12_RS22165;product=C40 family peptidase;protein_id=WP_032286287.1;transl_table=11 NZ_JJLK01000032.1 RefSeq pseudogene 19740 20103 . + . ID=gene-AD12_RS22160;Name=AD12_RS22160;end_range=20103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22160;old_locus_tag=AD12_5093;partial=true;pseudo=true NZ_JJLK01000032.1 Protein Homology CDS 19740 20103 . + 0 ID=cds-AD12_RS22160;Parent=gene-AD12_RS22160;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=20103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309674.2;locus_tag=AD12_RS22160;partial=true;product=tail assembly protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000033.1 1 2499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000033.1 RefSeq region 1 2499 . + . ID=NZ_JJLK01000033.1:1..2499;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000033.1 RefSeq gene 1 453 . + . ID=gene-AD12_RS22155;Name=AD12_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22155;old_locus_tag=AD12_5094;partial=true;start_range=.,1 NZ_JJLK01000033.1 Protein Homology CDS 1 453 . + 0 ID=cds-WP_032286290.1;Parent=gene-AD12_RS22155;Dbxref=GenBank:WP_032286290.1;Name=WP_032286290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309674.2;locus_tag=AD12_RS22155;partial=true;product=tail assembly protein;protein_id=WP_032286290.1;start_range=.,1;transl_table=11 NZ_JJLK01000033.1 RefSeq gene 514 2499 . + . ID=gene-AD12_RS22150;Name=AD12_RS22150;end_range=2499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22150;old_locus_tag=AD12_5095;partial=true NZ_JJLK01000033.1 Protein Homology CDS 514 2499 . + 0 ID=cds-WP_032286292.1;Parent=gene-AD12_RS22150;Dbxref=GenBank:WP_032286292.1;Name=WP_032286292.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;end_range=2499,.;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AD12_RS22150;partial=true;product=host specificity protein J;protein_id=WP_032286292.1;transl_table=11 ##sequence-region NZ_JJLK01000034.1 1 775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000034.1 RefSeq region 1 775 . + . ID=NZ_JJLK01000034.1:1..775;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000034.1 RefSeq gene 1 210 . + . ID=gene-AD12_RS22145;Name=AD12_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22145;old_locus_tag=AD12_5096;partial=true;start_range=.,1 NZ_JJLK01000034.1 Protein Homology CDS 1 210 . + 0 ID=cds-WP_023909264.1-2;Parent=gene-AD12_RS22145;Dbxref=GenBank:WP_023909264.1;Name=WP_023909264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AD12_RS22145;partial=true;product=JAB domain-containing protein;protein_id=WP_023909264.1;start_range=.,1;transl_table=11 NZ_JJLK01000034.1 RefSeq gene 273 494 . + . ID=gene-AD12_RS22140;Name=AD12_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22140;old_locus_tag=AD12_5097 NZ_JJLK01000034.1 Protein Homology CDS 273 494 . + 0 ID=cds-WP_000692345.1;Parent=gene-AD12_RS22140;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AD12_RS22140;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11 NZ_JJLK01000034.1 RefSeq gene 657 775 . + . ID=gene-AD12_RS28465;Name=AD12_RS28465;end_range=775,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28465;partial=true NZ_JJLK01000034.1 Protein Homology CDS 657 775 . + 0 ID=cds-WP_170908280.1-2;Parent=gene-AD12_RS28465;Dbxref=GenBank:WP_170908280.1;Name=WP_170908280.1;Ontology_term=GO:0051495;end_range=775,.;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310832.1;locus_tag=AD12_RS28465;partial=true;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_170908280.1;transl_table=11 ##sequence-region NZ_JJLK01000035.1 1 568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000035.1 RefSeq region 1 568 . + . ID=NZ_JJLK01000035.1:1..568;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000035.1 RefSeq pseudogene 1 568 . + . ID=gene-AD12_RS22130;Name=AD12_RS22130;end_range=568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22130;old_locus_tag=AD12_5099;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000035.1 Protein Homology CDS 1 568 . + 1 ID=cds-AD12_RS22130;Parent=gene-AD12_RS22130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD12_RS22130;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000036.1 1 704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000036.1 RefSeq region 1 704 . + . ID=NZ_JJLK01000036.1:1..704;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000036.1 RefSeq gene 145 252 . + . ID=gene-AD12_RS22125;Name=AD12_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22125;old_locus_tag=AD12_5100 NZ_JJLK01000036.1 Protein Homology CDS 145 252 . + 0 ID=cds-WP_000170963.1;Parent=gene-AD12_RS22125;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AD12_RS22125;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 ##sequence-region NZ_JJLK01000037.1 1 1707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000037.1 RefSeq region 1 1707 . + . ID=NZ_JJLK01000037.1:1..1707;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000037.1 RefSeq gene 50 409 . - . ID=gene-AD12_RS22120;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AD12_RS22120;old_locus_tag=AD12_5101 NZ_JJLK01000037.1 Protein Homology CDS 50 409 . - 0 ID=cds-WP_001299198.1;Parent=gene-AD12_RS22120;Dbxref=GenBank:WP_001299198.1;Name=WP_001299198.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AD12_RS22120;product=fumarate reductase subunit FrdD;protein_id=WP_001299198.1;transl_table=11 NZ_JJLK01000037.1 RefSeq gene 420 815 . - . ID=gene-AD12_RS22115;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AD12_RS22115;old_locus_tag=AD12_5102 NZ_JJLK01000037.1 Protein Homology CDS 420 815 . - 0 ID=cds-WP_000208757.1;Parent=gene-AD12_RS22115;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AD12_RS22115;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJLK01000037.1 RefSeq gene 826 1560 . - . ID=gene-AD12_RS22110;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AD12_RS22110;old_locus_tag=AD12_5103 NZ_JJLK01000037.1 Protein Homology CDS 826 1560 . - 0 ID=cds-WP_000829498.1;Parent=gene-AD12_RS22110;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AD12_RS22110;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJLK01000037.1 RefSeq gene 1553 1707 . - . ID=gene-AD12_RS29400;Name=AD12_RS29400;end_range=1707,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29400;old_locus_tag=AD12_5104;partial=true NZ_JJLK01000037.1 Protein Homology CDS 1553 1707 . - 2 ID=cds-WP_187439329.1;Parent=gene-AD12_RS29400;Dbxref=GenBank:WP_187439329.1;Name=WP_187439329.1;end_range=1707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313162.1;locus_tag=AD12_RS29400;partial=true;product=hypothetical protein;protein_id=WP_187439329.1;transl_table=11 ##sequence-region NZ_JJLK01000038.1 1 379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000038.1 RefSeq region 1 379 . + . ID=NZ_JJLK01000038.1:1..379;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000038.1 RefSeq gene 1 379 . - . ID=gene-AD12_RS22105;Name=AD12_RS22105;end_range=379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22105;old_locus_tag=AD12_5105;partial=true;start_range=.,1 NZ_JJLK01000038.1 Protein Homology CDS 1 379 . - 1 ID=cds-WP_032286294.1;Parent=gene-AD12_RS22105;Dbxref=GenBank:WP_032286294.1;Name=WP_032286294.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;end_range=379,.;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD12_RS22105;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_032286294.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000039.1 1 5494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000039.1 RefSeq region 1 5494 . + . ID=NZ_JJLK01000039.1:1..5494;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000039.1 RefSeq gene 1 718 . + . ID=gene-AD12_RS22100;Name=AD12_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22100;old_locus_tag=AD12_5106;partial=true;start_range=.,1 NZ_JJLK01000039.1 Protein Homology CDS 1 718 . + 1 ID=cds-WP_001514257.1;Parent=gene-AD12_RS22100;Dbxref=GenBank:WP_001514257.1;Name=WP_001514257.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD12_RS22100;partial=true;product=Tn3 family transposase;protein_id=WP_001514257.1;start_range=.,1;transl_table=11 NZ_JJLK01000039.1 RefSeq gene 1050 1700 . - . ID=gene-AD12_RS22095;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=AD12_RS22095;old_locus_tag=AD12_5107 NZ_JJLK01000039.1 Protein Homology CDS 1050 1700 . - 0 ID=cds-WP_000164043.1;Parent=gene-AD12_RS22095;Dbxref=GenBank:WP_000164043.1;Name=WP_000164043.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=AD12_RS22095;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_000164043.1;transl_table=11 NZ_JJLK01000039.1 RefSeq gene 1806 3005 . + . ID=gene-AD12_RS22090;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=AD12_RS22090;old_locus_tag=AD12_5108 NZ_JJLK01000039.1 Protein Homology CDS 1806 3005 . + 0 ID=cds-WP_000804064.1;Parent=gene-AD12_RS22090;Dbxref=GenBank:WP_000804064.1;Name=WP_000804064.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=AD12_RS22090;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_000804064.1;transl_table=11 NZ_JJLK01000039.1 RefSeq gene 3037 3921 . - . ID=gene-AD12_RS22085;Name=AD12_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22085;old_locus_tag=AD12_5109 NZ_JJLK01000039.1 Protein Homology CDS 3037 3921 . - 0 ID=cds-WP_000058717.1;Parent=gene-AD12_RS22085;Dbxref=GenBank:WP_000058717.1;Name=WP_000058717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=AD12_RS22085;product=DMT family transporter;protein_id=WP_000058717.1;transl_table=11 NZ_JJLK01000039.1 RefSeq gene 4059 4451 . - . ID=gene-AD12_RS22080;Name=AD12_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22080;old_locus_tag=AD12_5110 NZ_JJLK01000039.1 Protein Homology CDS 4059 4451 . - 0 ID=cds-WP_001351729.1;Parent=gene-AD12_RS22080;Dbxref=GenBank:WP_001351729.1;Name=WP_001351729.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.6;locus_tag=AD12_RS22080;product=cysteine hydrolase family protein;protein_id=WP_001351729.1;transl_table=11 NZ_JJLK01000039.1 RefSeq pseudogene 4455 5494 . + . ID=gene-AD12_RS22075;Name=AD12_RS22075;end_range=5494,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS22075;old_locus_tag=AD12_5111;partial=true;pseudo=true;start_range=.,4455 NZ_JJLK01000039.1 Protein Homology CDS 4455 5494 . + 0 ID=cds-AD12_RS22075;Parent=gene-AD12_RS22075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5494,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD12_RS22075;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,4455;transl_table=11 ##sequence-region NZ_JJLK01000040.1 1 438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000040.1 RefSeq region 1 438 . + . ID=NZ_JJLK01000040.1:1..438;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000040.1 RefSeq pseudogene 1 438 . - . ID=gene-AD12_RS22070;Name=sitA;end_range=438,.;gbkey=Gene;gene=sitA;gene_biotype=pseudogene;locus_tag=AD12_RS22070;old_locus_tag=AD12_5112;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000040.1 Protein Homology CDS 1 438 . - 0 ID=cds-AD12_RS22070;Parent=gene-AD12_RS22070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=438,.;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AD12_RS22070;partial=true;product=iron/manganese ABC transporter substrate-binding protein SitA;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000041.1 1 261615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000041.1 RefSeq region 1 261615 . + . ID=NZ_JJLK01000041.1:1..261615;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000041.1 RefSeq gene 128 676 . + . ID=gene-AD12_RS22065;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AD12_RS22065;old_locus_tag=AD12_0001 NZ_JJLK01000041.1 Protein Homology CDS 128 676 . + 0 ID=cds-WP_000695543.1;Parent=gene-AD12_RS22065;Dbxref=GenBank:WP_000695543.1;Name=WP_000695543.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AD12_RS22065;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695543.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 741 1280 . + . ID=gene-AD12_RS22060;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AD12_RS22060;old_locus_tag=AD12_0002 NZ_JJLK01000041.1 Protein Homology CDS 741 1280 . + 0 ID=cds-WP_000824114.1;Parent=gene-AD12_RS22060;Dbxref=GenBank:WP_000824114.1;Name=WP_000824114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AD12_RS22060;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 1317 2042 . + . ID=gene-AD12_RS22055;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AD12_RS22055;old_locus_tag=AD12_0004 NZ_JJLK01000041.1 Protein Homology CDS 1317 2042 . + 0 ID=cds-WP_000066573.1;Parent=gene-AD12_RS22055;Dbxref=GenBank:WP_000066573.1;Name=WP_000066573.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AD12_RS22055;product=type 1 fimbria chaperone FimC;protein_id=WP_000066573.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 2109 4745 . + . ID=gene-AD12_RS22050;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AD12_RS22050;old_locus_tag=AD12_0005 NZ_JJLK01000041.1 Protein Homology CDS 2109 4745 . + 0 ID=cds-WP_000120938.1;Parent=gene-AD12_RS22050;Dbxref=GenBank:WP_000120938.1;Name=WP_000120938.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=AD12_RS22050;product=fimbrial usher FimD;protein_id=WP_000120938.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 4755 5285 . + . ID=gene-AD12_RS22045;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AD12_RS22045;old_locus_tag=AD12_0006 NZ_JJLK01000041.1 Protein Homology CDS 4755 5285 . + 0 ID=cds-WP_001244827.1;Parent=gene-AD12_RS22045;Dbxref=GenBank:WP_001244827.1;Name=WP_001244827.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418738.1;locus_tag=AD12_RS22045;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244827.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 5358 5801 . + . ID=gene-AD12_RS22040;Name=AD12_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS22040;old_locus_tag=AD12_0007 NZ_JJLK01000041.1 Protein Homology CDS 5358 5801 . + 0 ID=cds-WP_077897989.1;Parent=gene-AD12_RS22040;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AD12_RS22040;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 5821 6723 . + . ID=gene-AD12_RS22035;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AD12_RS22035;old_locus_tag=AD12_0008 NZ_JJLK01000041.1 Protein Homology CDS 5821 6723 . + 0 ID=cds-WP_000832227.1;Parent=gene-AD12_RS22035;Dbxref=GenBank:WP_000832227.1;Name=WP_000832227.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AD12_RS22035;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832227.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 6966 8309 . - . ID=gene-AD12_RS22030;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AD12_RS22030;old_locus_tag=AD12_0009 NZ_JJLK01000041.1 Protein Homology CDS 6966 8309 . - 0 ID=cds-WP_000558251.1;Parent=gene-AD12_RS22030;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AD12_RS22030;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 8649 9833 . + . ID=gene-AD12_RS22025;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AD12_RS22025;old_locus_tag=AD12_0011 NZ_JJLK01000041.1 Protein Homology CDS 8649 9833 . + 0 ID=cds-WP_000438591.1;Parent=gene-AD12_RS22025;Dbxref=GenBank:WP_000438591.1;Name=WP_000438591.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AD12_RS22025;product=mannonate dehydratase;protein_id=WP_000438591.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 9914 11374 . + . ID=gene-AD12_RS22020;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AD12_RS22020;old_locus_tag=AD12_0012 NZ_JJLK01000041.1 Protein Homology CDS 9914 11374 . + 0 ID=cds-WP_032286297.1;Parent=gene-AD12_RS22020;Dbxref=GenBank:WP_032286297.1;Name=WP_032286297.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AD12_RS22020;product=fructuronate reductase;protein_id=WP_032286297.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 11589 12362 . + . ID=gene-AD12_RS22015;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AD12_RS22015;old_locus_tag=AD12_0013 NZ_JJLK01000041.1 Protein Homology CDS 11589 12362 . + 0 ID=cds-WP_000833679.1;Parent=gene-AD12_RS22015;Dbxref=GenBank:WP_000833679.1;Name=WP_000833679.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=AD12_RS22015;product=Uxu operon transcriptional regulator;protein_id=WP_000833679.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 12503 13333 . - . ID=gene-AD12_RS22010;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AD12_RS22010;old_locus_tag=AD12_0014 NZ_JJLK01000041.1 Protein Homology CDS 12503 13333 . - 0 ID=cds-WP_000062583.1;Parent=gene-AD12_RS22010;Dbxref=GenBank:WP_000062583.1;Name=WP_000062583.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AD12_RS22010;product=DUF2686 family protein;protein_id=WP_000062583.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 13620 13688 . + . ID=gene-AD12_RS29845;Name=AD12_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29845 NZ_JJLK01000041.1 Protein Homology CDS 13620 13688 . + 0 ID=cds-WP_418267939.1;Parent=gene-AD12_RS29845;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AD12_RS29845;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 13667 13810 . + . ID=gene-AD12_RS29645;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AD12_RS29645;old_locus_tag=AD12_0015 NZ_JJLK01000041.1 Protein Homology CDS 13667 13810 . + 0 ID=cds-WP_001301448.1;Parent=gene-AD12_RS29645;Dbxref=GenBank:WP_001301448.1;Name=WP_001301448.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AD12_RS29645;product=protein YtiD;protein_id=WP_001301448.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 13926 14009 . + . ID=gene-AD12_RS28480;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AD12_RS28480 NZ_JJLK01000041.1 Protein Homology CDS 13926 14009 . + 0 ID=cds-WP_120795393.1;Parent=gene-AD12_RS28480;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AD12_RS28480;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 14006 14398 . + . ID=gene-AD12_RS22000;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AD12_RS22000;old_locus_tag=AD12_0017 NZ_JJLK01000041.1 Protein Homology CDS 14006 14398 . + 0 ID=cds-WP_000986203.1;Parent=gene-AD12_RS22000;Dbxref=GenBank:WP_000986203.1;Name=WP_000986203.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313312.2;locus_tag=AD12_RS22000;product=anti-adapter protein IraD;protein_id=WP_000986203.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 14391 15302 . - . ID=gene-AD12_RS21995;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AD12_RS21995;old_locus_tag=AD12_0018 NZ_JJLK01000041.1 Protein Homology CDS 14391 15302 . - 0 ID=cds-WP_000340740.1;Parent=gene-AD12_RS21995;Dbxref=GenBank:WP_000340740.1;Name=WP_000340740.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AD12_RS21995;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340740.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 15367 16539 . - . ID=gene-AD12_RS21990;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AD12_RS21990;old_locus_tag=AD12_0019 NZ_JJLK01000041.1 Protein Homology CDS 15367 16539 . - 0 ID=cds-WP_000568417.1;Parent=gene-AD12_RS21990;Dbxref=GenBank:WP_000568417.1;Name=WP_000568417.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AD12_RS21990;product=beta-aspartyl-peptidase;protein_id=WP_000568417.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 16552 17013 . - . ID=gene-AD12_RS21985;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AD12_RS21985;old_locus_tag=AD12_0020 NZ_JJLK01000041.1 Protein Homology CDS 16552 17013 . - 0 ID=cds-WP_000211971.1;Parent=gene-AD12_RS21985;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AD12_RS21985;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 17010 17693 . - . ID=gene-AD12_RS21980;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AD12_RS21980;old_locus_tag=AD12_0021 NZ_JJLK01000041.1 Protein Homology CDS 17010 17693 . - 0 ID=cds-WP_001295597.1;Parent=gene-AD12_RS21980;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AD12_RS21980;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 17943 18497 . + . ID=gene-AD12_RS21975;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AD12_RS21975;old_locus_tag=AD12_0023 NZ_JJLK01000041.1 Protein Homology CDS 17943 18497 . + 0 ID=cds-WP_001151854.1;Parent=gene-AD12_RS21975;Dbxref=GenBank:WP_001151854.1;Name=WP_001151854.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AD12_RS21975;product=RNA 2'-phosphotransferase;protein_id=WP_001151854.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 18510 19688 . - . ID=gene-AD12_RS21970;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AD12_RS21970;old_locus_tag=AD12_0024 NZ_JJLK01000041.1 Protein Homology CDS 18510 19688 . - 0 ID=cds-WP_001141206.1;Parent=gene-AD12_RS21970;Dbxref=GenBank:WP_001141206.1;Name=WP_001141206.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AD12_RS21970;product=MFS transporter;protein_id=WP_001141206.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 19756 20616 . - . ID=gene-AD12_RS21965;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AD12_RS21965;old_locus_tag=AD12_0025 NZ_JJLK01000041.1 Protein Homology CDS 19756 20616 . - 0 ID=cds-WP_001298932.1;Parent=gene-AD12_RS21965;Dbxref=GenBank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AD12_RS21965;product=SdiA-regulated domain-containing protein;protein_id=WP_001298932.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 20681 20938 . - . ID=gene-AD12_RS21960;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AD12_RS21960;old_locus_tag=AD12_0026 NZ_JJLK01000041.1 Protein Homology CDS 20681 20938 . - 0 ID=cds-WP_000657676.1;Parent=gene-AD12_RS21960;Dbxref=GenBank:WP_000657676.1;Name=WP_000657676.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AD12_RS21960;product=DUF3343 domain-containing protein;protein_id=WP_000657676.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 20935 21702 . - . ID=gene-AD12_RS21955;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AD12_RS21955;old_locus_tag=AD12_0027 NZ_JJLK01000041.1 Protein Homology CDS 20935 21702 . - 0 ID=cds-WP_000222495.1;Parent=gene-AD12_RS21955;Dbxref=GenBank:WP_000222495.1;Name=WP_000222495.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=AD12_RS21955;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222495.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 21712 22863 . - . ID=gene-AD12_RS21950;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AD12_RS21950;old_locus_tag=AD12_0028 NZ_JJLK01000041.1 Protein Homology CDS 21712 22863 . - 0 ID=cds-WP_001376101.1;Parent=gene-AD12_RS21950;Dbxref=GenBank:WP_001376101.1;Name=WP_001376101.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AD12_RS21950;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001376101.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 22979 24259 . - . ID=gene-AD12_RS21945;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AD12_RS21945;old_locus_tag=AD12_0029 NZ_JJLK01000041.1 Protein Homology CDS 22979 24259 . - 0 ID=cds-WP_001037377.1;Parent=gene-AD12_RS21945;Dbxref=GenBank:WP_001037377.1;Name=WP_001037377.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AD12_RS21945;product=DUF445 domain-containing protein;protein_id=WP_001037377.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 24300 25532 . - . ID=gene-AD12_RS21940;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AD12_RS21940;old_locus_tag=AD12_0030 NZ_JJLK01000041.1 Protein Homology CDS 24300 25532 . - 0 ID=cds-WP_001137002.1;Parent=gene-AD12_RS21940;Dbxref=GenBank:WP_001137002.1;Name=WP_001137002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AD12_RS21940;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137002.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 25999 26955 . + . ID=gene-AD12_RS21935;Name=AD12_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS21935;old_locus_tag=AD12_0032 NZ_JJLK01000041.1 Protein Homology CDS 25999 26955 . + 0 ID=cds-WP_000181112.1;Parent=gene-AD12_RS21935;Dbxref=GenBank:WP_000181112.1;Name=WP_000181112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=AD12_RS21935;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000181112.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 27198 28610 . - . ID=gene-AD12_RS21930;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=AD12_RS21930;old_locus_tag=AD12_0034 NZ_JJLK01000041.1 Protein Homology CDS 27198 28610 . - 0 ID=cds-WP_001376102.1;Parent=gene-AD12_RS21930;Dbxref=GenBank:WP_001376102.1;Name=WP_001376102.1;Ontology_term=GO:0030170;gbkey=CDS;gene=yjiR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=AD12_RS21930;product=PLP-dependent aminotransferase family protein;protein_id=WP_001376102.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 28787 28951 . + . ID=gene-AD12_RS21925;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=AD12_RS21925;old_locus_tag=AD12_0035 NZ_JJLK01000041.1 Protein Homology CDS 28787 28951 . + 0 ID=cds-WP_000394270.1;Parent=gene-AD12_RS21925;Dbxref=GenBank:WP_000394270.1;Name=WP_000394270.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=AD12_RS21925;product=DUF1127 domain-containing protein;protein_id=WP_000394270.1;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 29303 31842 . + . ID=gene-AD12_RS0122970;Name=AD12_RS0122970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0122970;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 29303 31842 . + 0 ID=cds-AD12_RS0122970;Parent=gene-AD12_RS0122970;Note=frameshifted;Ontology_term=GO:0017000,GO:0046677,GO:0008953,GO:0016811,GO:0046872;gbkey=CDS;go_function=penicillin amidase activity|0008953||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA,metal ion binding|0046872||IEA;go_process=antibiotic biosynthetic process|0017000||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569102.1;locus_tag=AD12_RS0122970;product=penicillin G acylase;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 31920 32876 . - . ID=gene-AD12_RS21915;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AD12_RS21915;old_locus_tag=AD12_0038 NZ_JJLK01000041.1 Protein Homology CDS 31920 32876 . - 0 ID=cds-WP_001376126.1;Parent=gene-AD12_RS21915;Dbxref=GenBank:WP_001376126.1;Name=WP_001376126.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AD12_RS21915;product=GTPase;protein_id=WP_001376126.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 32887 33090 . - . ID=gene-AD12_RS21910;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AD12_RS21910;old_locus_tag=AD12_0039 NZ_JJLK01000041.1 Protein Homology CDS 32887 33090 . - 0 ID=cds-WP_000467859.1;Parent=gene-AD12_RS21910;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AD12_RS21910;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 33140 35290 . - . ID=gene-AD12_RS21905;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AD12_RS21905;old_locus_tag=AD12_0040 NZ_JJLK01000041.1 Protein Homology CDS 33140 35290 . - 0 ID=cds-WP_001356021.1;Parent=gene-AD12_RS21905;Dbxref=GenBank:WP_001356021.1;Name=WP_001356021.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313340.2;locus_tag=AD12_RS21905;product=pyruvate/proton symporter BtsT;protein_id=WP_001356021.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 35683 36195 . - . ID=gene-AD12_RS21895;Name=AD12_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS21895;old_locus_tag=AD12_0042 NZ_JJLK01000041.1 Protein Homology CDS 35683 36195 . - 0 ID=cds-WP_001175455.1;Parent=gene-AD12_RS21895;Dbxref=GenBank:WP_001175455.1;Name=WP_001175455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710082.1;locus_tag=AD12_RS21895;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001175455.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 36213 37775 . - . ID=gene-AD12_RS21890;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=AD12_RS21890;old_locus_tag=AD12_0043 NZ_JJLK01000041.1 Protein Homology CDS 36213 37775 . - 0 ID=cds-WP_032286299.1;Parent=gene-AD12_RS21890;Dbxref=GenBank:WP_032286299.1;Name=WP_032286299.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=AD12_RS21890;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_032286299.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 38026 38916 . - . ID=gene-AD12_RS21885;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=AD12_RS21885;old_locus_tag=AD12_0044 NZ_JJLK01000041.1 Protein Homology CDS 38026 38916 . - 0 ID=cds-WP_000332891.1;Parent=gene-AD12_RS21885;Dbxref=GenBank:WP_000332891.1;Name=WP_000332891.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801836.1;locus_tag=AD12_RS21885;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000332891.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 38926 40302 . - . ID=gene-AD12_RS21880;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=AD12_RS21880;old_locus_tag=AD12_0045 NZ_JJLK01000041.1 Protein Homology CDS 38926 40302 . - 0 ID=cds-WP_001285769.1;Parent=gene-AD12_RS21880;Dbxref=GenBank:WP_001285769.1;Name=WP_001285769.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=AD12_RS21880;product=4-hydroxyphenylacetate permease;protein_id=WP_001285769.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 40477 41265 . - . ID=gene-AD12_RS21875;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=AD12_RS21875;old_locus_tag=AD12_0047 NZ_JJLK01000041.1 Protein Homology CDS 40477 41265 . - 0 ID=cds-WP_032286300.1;Parent=gene-AD12_RS21875;Dbxref=GenBank:WP_032286300.1;Name=WP_032286300.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966060.1;locus_tag=AD12_RS21875;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_032286300.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 41276 42079 . - . ID=gene-AD12_RS21870;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=AD12_RS21870;old_locus_tag=AD12_0048 NZ_JJLK01000041.1 Protein Homology CDS 41276 42079 . - 0 ID=cds-WP_000459750.1;Parent=gene-AD12_RS21870;Dbxref=GenBank:WP_000459750.1;Name=WP_000459750.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710089.2;locus_tag=AD12_RS21870;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000459750.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 42190 42570 . - . ID=gene-AD12_RS21865;Name=AD12_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS21865;old_locus_tag=AD12_0049 NZ_JJLK01000041.1 Protein Homology CDS 42190 42570 . - 0 ID=cds-WP_001119864.1;Parent=gene-AD12_RS21865;Dbxref=GenBank:WP_001119864.1;Name=WP_001119864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710090.1;locus_tag=AD12_RS21865;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119864.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 42580 43431 . - . ID=gene-AD12_RS21860;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=AD12_RS21860;old_locus_tag=AD12_0050 NZ_JJLK01000041.1 Protein Homology CDS 42580 43431 . - 0 ID=cds-WP_000516990.1;Parent=gene-AD12_RS21860;Dbxref=GenBank:WP_000516990.1;Name=WP_000516990.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710091.1;locus_tag=AD12_RS21860;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516990.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 43433 44899 . - . ID=gene-AD12_RS21855;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=AD12_RS21855;old_locus_tag=AD12_0051 NZ_JJLK01000041.1 Protein Homology CDS 43433 44899 . - 0 ID=cds-WP_000757512.1;Parent=gene-AD12_RS21855;Dbxref=GenBank:WP_000757512.1;Name=WP_000757512.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=AD12_RS21855;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000757512.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 44896 46185 . - . ID=gene-AD12_RS21850;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=AD12_RS21850;old_locus_tag=AD12_0052 NZ_JJLK01000041.1 Protein Homology CDS 44896 46185 . - 0 ID=cds-WP_000679092.1;Parent=gene-AD12_RS21850;Dbxref=GenBank:WP_000679092.1;Name=WP_000679092.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710093.2;locus_tag=AD12_RS21850;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679092.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 46457 46903 . + . ID=gene-AD12_RS21845;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=AD12_RS21845;old_locus_tag=AD12_0053 NZ_JJLK01000041.1 Protein Homology CDS 46457 46903 . + 0 ID=cds-WP_000543915.1;Parent=gene-AD12_RS21845;Dbxref=GenBank:WP_000543915.1;Name=WP_000543915.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710094.1;locus_tag=AD12_RS21845;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543915.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 47022 48677 . + . ID=gene-AD12_RS21840;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AD12_RS21840;old_locus_tag=AD12_0054 NZ_JJLK01000041.1 Protein Homology CDS 47022 48677 . + 0 ID=cds-WP_000919572.1;Parent=gene-AD12_RS21840;Dbxref=GenBank:WP_000919572.1;Name=WP_000919572.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418775.1;locus_tag=AD12_RS21840;product=methyl-accepting chemotaxis protein;protein_id=WP_000919572.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 48726 50087 . - . ID=gene-AD12_RS21835;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=AD12_RS21835;old_locus_tag=AD12_0055 NZ_JJLK01000041.1 Protein Homology CDS 48726 50087 . - 0 ID=cds-WP_000410127.1;Parent=gene-AD12_RS21835;Dbxref=GenBank:WP_000410127.1;Name=WP_000410127.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418776.1;locus_tag=AD12_RS21835;product=MFS transporter;protein_id=WP_000410127.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 50302 51216 . - . ID=gene-AD12_RS21830;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=AD12_RS21830;old_locus_tag=AD12_0056 NZ_JJLK01000041.1 Protein Homology CDS 50302 51216 . - 0 ID=cds-WP_000091572.1;Parent=gene-AD12_RS21830;Dbxref=GenBank:WP_000091572.1;Name=WP_000091572.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=AD12_RS21830;product=GntR family transcriptional regulator;protein_id=WP_000091572.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 51355 52377 . + . ID=gene-AD12_RS21825;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AD12_RS21825;old_locus_tag=AD12_0057 NZ_JJLK01000041.1 Protein Homology CDS 51355 52377 . + 0 ID=cds-WP_000106030.1;Parent=gene-AD12_RS21825;Dbxref=GenBank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AD12_RS21825;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 52517 54808 . - . ID=gene-AD12_RS21820;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AD12_RS21820;old_locus_tag=AD12_0058 NZ_JJLK01000041.1 Protein Homology CDS 52517 54808 . - 0 ID=cds-WP_001292661.1;Parent=gene-AD12_RS21820;Dbxref=GenBank:WP_001292661.1;Name=WP_001292661.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AD12_RS21820;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292661.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 55062 55556 . - . ID=gene-AD12_RS21815;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AD12_RS21815;old_locus_tag=AD12_0059 NZ_JJLK01000041.1 Protein Homology CDS 55062 55556 . - 0 ID=cds-WP_077248833.1;Parent=gene-AD12_RS21815;Dbxref=GenBank:WP_077248833.1;Name=WP_077248833.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AD12_RS21815;product=DUF2501 domain-containing protein YjjA;protein_id=WP_077248833.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 55605 56342 . - . ID=gene-AD12_RS21810;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AD12_RS21810;old_locus_tag=AD12_0060 NZ_JJLK01000041.1 Protein Homology CDS 55605 56342 . - 0 ID=cds-WP_000799911.1;Parent=gene-AD12_RS21810;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AD12_RS21810;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 56345 56884 . - . ID=gene-AD12_RS21805;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AD12_RS21805;old_locus_tag=AD12_0061 NZ_JJLK01000041.1 Protein Homology CDS 56345 56884 . - 0 ID=cds-WP_000098818.1;Parent=gene-AD12_RS21805;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AD12_RS21805;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 56991 57464 . - . ID=gene-AD12_RS21800;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AD12_RS21800;old_locus_tag=AD12_0062 NZ_JJLK01000041.1 Protein Homology CDS 56991 57464 . - 0 ID=cds-WP_000538178.1;Parent=gene-AD12_RS21800;Dbxref=GenBank:WP_000538178.1;Name=WP_000538178.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AD12_RS21800;product=threonine/serine exporter;protein_id=WP_000538178.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 57455 58225 . - . ID=gene-AD12_RS21795;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AD12_RS21795;old_locus_tag=AD12_0063 NZ_JJLK01000041.1 Protein Homology CDS 57455 58225 . - 0 ID=cds-WP_001338213.1;Parent=gene-AD12_RS21795;Dbxref=GenBank:WP_001338213.1;Name=WP_001338213.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AD12_RS21795;product=threonine/serine ThrE exporter family protein;protein_id=WP_001338213.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 58844 59569 . + . ID=gene-AD12_RS21790;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=AD12_RS21790;old_locus_tag=AD12_0064 NZ_JJLK01000041.1 Protein Homology CDS 58844 59569 . + 0 ID=cds-WP_000936635.1;Parent=gene-AD12_RS21790;Dbxref=GenBank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AD12_RS21790;product=helix-turn-helix domain-containing protein;protein_id=WP_000936635.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 59527 60204 . + . ID=gene-AD12_RS21785;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AD12_RS21785;old_locus_tag=AD12_0065 NZ_JJLK01000041.1 Protein Homology CDS 59527 60204 . + 0 ID=cds-WP_001301727.1;Parent=gene-AD12_RS21785;Dbxref=GenBank:WP_001301727.1;Name=WP_001301727.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AD12_RS21785;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001301727.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 60242 61030 . - . ID=gene-AD12_RS21780;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AD12_RS21780;old_locus_tag=AD12_0066 NZ_JJLK01000041.1 Protein Homology CDS 60242 61030 . - 0 ID=cds-WP_000331559.1;Parent=gene-AD12_RS21780;Dbxref=GenBank:WP_000331559.1;Name=WP_000331559.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AD12_RS21780;product=siderophore-iron reductase FhuF;protein_id=WP_000331559.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 61171 61407 . + . ID=gene-AD12_RS21775;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=AD12_RS21775;old_locus_tag=AD12_0067 NZ_JJLK01000041.1 Protein Homology CDS 61171 61407 . + 0 ID=cds-WP_001382695.1;Parent=gene-AD12_RS21775;Dbxref=GenBank:WP_001382695.1;Name=WP_001382695.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AD12_RS21775;product=DUF1435 domain-containing protein;protein_id=WP_001382695.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 61446 61532 . - . ID=gene-AD12_RS21770;Name=AD12_RS21770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS21770;old_locus_tag=AD12_0068 NZ_JJLK01000041.1 tRNAscan-SE tRNA 61446 61532 . - . ID=rna-AD12_RS21770;Parent=gene-AD12_RS21770;anticodon=(pos:complement(61496..61498));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21770;product=tRNA-Leu NZ_JJLK01000041.1 tRNAscan-SE exon 61446 61532 . - . ID=exon-AD12_RS21770-1;Parent=rna-AD12_RS21770;anticodon=(pos:complement(61496..61498));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21770;product=tRNA-Leu NZ_JJLK01000041.1 RefSeq gene 61567 61653 . - . ID=gene-AD12_RS21765;Name=AD12_RS21765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS21765;old_locus_tag=AD12_0069 NZ_JJLK01000041.1 tRNAscan-SE tRNA 61567 61653 . - . ID=rna-AD12_RS21765;Parent=gene-AD12_RS21765;anticodon=(pos:complement(61617..61619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21765;product=tRNA-Leu NZ_JJLK01000041.1 tRNAscan-SE exon 61567 61653 . - . ID=exon-AD12_RS21765-1;Parent=rna-AD12_RS21765;anticodon=(pos:complement(61617..61619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21765;product=tRNA-Leu NZ_JJLK01000041.1 RefSeq gene 61682 61768 . - . ID=gene-AD12_RS21760;Name=AD12_RS21760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS21760;old_locus_tag=AD12_0070 NZ_JJLK01000041.1 tRNAscan-SE tRNA 61682 61768 . - . ID=rna-AD12_RS21760;Parent=gene-AD12_RS21760;anticodon=(pos:complement(61732..61734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21760;product=tRNA-Leu NZ_JJLK01000041.1 tRNAscan-SE exon 61682 61768 . - . ID=exon-AD12_RS21760-1;Parent=rna-AD12_RS21760;anticodon=(pos:complement(61732..61734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21760;product=tRNA-Leu NZ_JJLK01000041.1 RefSeq gene 61803 61889 . - . ID=gene-AD12_RS21755;Name=AD12_RS21755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS21755;old_locus_tag=AD12_0071 NZ_JJLK01000041.1 tRNAscan-SE tRNA 61803 61889 . - . ID=rna-AD12_RS21755;Parent=gene-AD12_RS21755;anticodon=(pos:complement(61853..61855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21755;product=tRNA-Leu NZ_JJLK01000041.1 tRNAscan-SE exon 61803 61889 . - . ID=exon-AD12_RS21755-1;Parent=rna-AD12_RS21755;anticodon=(pos:complement(61853..61855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21755;product=tRNA-Leu NZ_JJLK01000041.1 RefSeq gene 61918 62004 . - . ID=gene-AD12_RS21750;Name=AD12_RS21750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS21750;old_locus_tag=AD12_0072 NZ_JJLK01000041.1 tRNAscan-SE tRNA 61918 62004 . - . ID=rna-AD12_RS21750;Parent=gene-AD12_RS21750;anticodon=(pos:complement(61968..61970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21750;product=tRNA-Leu NZ_JJLK01000041.1 tRNAscan-SE exon 61918 62004 . - . ID=exon-AD12_RS21750-1;Parent=rna-AD12_RS21750;anticodon=(pos:complement(61968..61970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS21750;product=tRNA-Leu NZ_JJLK01000041.1 RefSeq gene 62272 63303 . - . ID=gene-AD12_RS21745;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AD12_RS21745;old_locus_tag=AD12_0073 NZ_JJLK01000041.1 Protein Homology CDS 62272 63303 . - 0 ID=cds-WP_032286301.1;Parent=gene-AD12_RS21745;Dbxref=GenBank:WP_032286301.1;Name=WP_032286301.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AD12_RS21745;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_032286301.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 63406 63819 . + . ID=gene-AD12_RS21740;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AD12_RS21740;old_locus_tag=AD12_0074 NZ_JJLK01000041.1 Protein Homology CDS 63406 63819 . + 0 ID=cds-WP_000204018.1;Parent=gene-AD12_RS21740;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AD12_RS21740;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 63788 64234 . + . ID=gene-AD12_RS21735;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AD12_RS21735;old_locus_tag=AD12_0075 NZ_JJLK01000041.1 Protein Homology CDS 63788 64234 . + 0 ID=cds-WP_001092465.1;Parent=gene-AD12_RS21735;Dbxref=GenBank:WP_001092465.1;Name=WP_001092465.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AD12_RS21735;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092465.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 64249 64926 . + . ID=gene-AD12_RS21730;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AD12_RS21730;old_locus_tag=AD12_0076 NZ_JJLK01000041.1 Protein Homology CDS 64249 64926 . + 0 ID=cds-WP_000870700.1;Parent=gene-AD12_RS21730;Dbxref=GenBank:WP_000870700.1;Name=WP_000870700.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710113.1;locus_tag=AD12_RS21730;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870700.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 65017 66606 . + . ID=gene-AD12_RS21725;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AD12_RS21725;old_locus_tag=AD12_0077 NZ_JJLK01000041.1 Protein Homology CDS 65017 66606 . + 0 ID=cds-WP_000175949.1;Parent=gene-AD12_RS21725;Dbxref=GenBank:WP_000175949.1;Name=WP_000175949.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AD12_RS21725;product=peptide chain release factor 3;protein_id=WP_000175949.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 66999 67604 . + . ID=gene-AD12_RS21720;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AD12_RS21720;old_locus_tag=AD12_0078 NZ_JJLK01000041.1 Protein Homology CDS 66999 67604 . + 0 ID=cds-WP_001295748.1;Parent=gene-AD12_RS21720;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AD12_RS21720;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 67731 67892 . + . ID=gene-AD12_RS21715;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AD12_RS21715;old_locus_tag=AD12_0079 NZ_JJLK01000041.1 Protein Homology CDS 67731 67892 . + 0 ID=cds-WP_000490275.1;Parent=gene-AD12_RS21715;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AD12_RS21715;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 68014 69087 . + . ID=gene-AD12_RS21710;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AD12_RS21710;old_locus_tag=AD12_0080 NZ_JJLK01000041.1 Protein Homology CDS 68014 69087 . + 0 ID=cds-WP_001299799.1;Parent=gene-AD12_RS21710;Dbxref=GenBank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AD12_RS21710;product=patatin-like phospholipase family protein;protein_id=WP_001299799.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 69084 69866 . + . ID=gene-AD12_RS21705;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AD12_RS21705;old_locus_tag=AD12_0081 NZ_JJLK01000041.1 Protein Homology CDS 69084 69866 . + 0 ID=cds-WP_000563058.1;Parent=gene-AD12_RS21705;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AD12_RS21705;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 70484 71347 . - . ID=gene-AD12_RS21700;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AD12_RS21700;old_locus_tag=AD12_0082 NZ_JJLK01000041.1 Protein Homology CDS 70484 71347 . - 0 ID=cds-WP_001088379.1;Parent=gene-AD12_RS21700;Dbxref=GenBank:WP_001088379.1;Name=WP_001088379.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AD12_RS21700;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088379.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 71319 72869 . - . ID=gene-AD12_RS21695;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AD12_RS21695;old_locus_tag=AD12_0083 NZ_JJLK01000041.1 Protein Homology CDS 71319 72869 . - 0 ID=cds-WP_001143253.1;Parent=gene-AD12_RS21695;Dbxref=GenBank:WP_001143253.1;Name=WP_001143253.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AD12_RS21695;product=YjjI family glycine radical enzyme;protein_id=WP_001143253.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 73127 73906 . + . ID=gene-AD12_RS21690;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD12_RS21690;old_locus_tag=AD12_0085 NZ_JJLK01000041.1 Protein Homology CDS 73127 73906 . + 0 ID=cds-WP_001295412.1;Parent=gene-AD12_RS21690;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AD12_RS21690;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 74033 75355 . + . ID=gene-AD12_RS21685;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AD12_RS21685;old_locus_tag=AD12_0086 NZ_JJLK01000041.1 Protein Homology CDS 74033 75355 . + 0 ID=cds-WP_000477811.1;Parent=gene-AD12_RS21685;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AD12_RS21685;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 75407 76630 . + . ID=gene-AD12_RS21680;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AD12_RS21680;old_locus_tag=AD12_0087 NZ_JJLK01000041.1 Protein Homology CDS 75407 76630 . + 0 ID=cds-WP_000816471.1;Parent=gene-AD12_RS21680;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AD12_RS21680;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 76710 77429 . + . ID=gene-AD12_RS21675;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AD12_RS21675;old_locus_tag=AD12_0088 NZ_JJLK01000041.1 Protein Homology CDS 76710 77429 . + 0 ID=cds-WP_000224877.1;Parent=gene-AD12_RS21675;Dbxref=GenBank:WP_000224877.1;Name=WP_000224877.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=AD12_RS21675;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 77590 77853 . - . ID=gene-AD12_RS29405;Name=AD12_RS29405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29405;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 77590 77853 . - 0 ID=cds-AD12_RS29405;Parent=gene-AD12_RS29405;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AD12_RS29405;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 77885 78901 . - . ID=gene-AD12_RS28490;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AD12_RS28490;old_locus_tag=AD12_0090 NZ_JJLK01000041.1 Protein Homology CDS 77885 78901 . - 0 ID=cds-WP_000105889.1;Parent=gene-AD12_RS28490;Dbxref=GenBank:WP_000105889.1;Name=WP_000105889.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AD12_RS28490;product=lipoate--protein ligase LplA;protein_id=WP_000105889.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 78929 79573 . - . ID=gene-AD12_RS28495;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AD12_RS28495;old_locus_tag=AD12_0091 NZ_JJLK01000041.1 Protein Homology CDS 78929 79573 . - 0 ID=cds-WP_000124615.1;Parent=gene-AD12_RS28495;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AD12_RS28495;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 79679 80647 . + . ID=gene-AD12_RS21655;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AD12_RS21655;old_locus_tag=AD12_0092 NZ_JJLK01000041.1 Protein Homology CDS 79679 80647 . + 0 ID=cds-WP_001132956.1;Parent=gene-AD12_RS21655;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AD12_RS21655;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 80696 82078 . + . ID=gene-AD12_RS21650;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AD12_RS21650;old_locus_tag=AD12_0093 NZ_JJLK01000041.1 Protein Homology CDS 80696 82078 . + 0 ID=cds-WP_001399683.1;Parent=gene-AD12_RS21650;Dbxref=GenBank:WP_001399683.1;Name=WP_001399683.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AD12_RS21650;product=DNA repair protein RadA;protein_id=WP_001399683.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 82099 83331 . + . ID=gene-AD12_RS21645;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AD12_RS21645;old_locus_tag=AD12_0094 NZ_JJLK01000041.1 Protein Homology CDS 82099 83331 . + 0 ID=cds-WP_000093810.1;Parent=gene-AD12_RS21645;Dbxref=GenBank:WP_000093810.1;Name=WP_000093810.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AD12_RS21645;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093810.1;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 83382 83477 . + . ID=gene-AD12_RS29850;Name=AD12_RS29850;end_range=83477,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29850;partial=true;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 83382 83477 . + 0 ID=cds-AD12_RS29850;Parent=gene-AD12_RS29850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=83477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097645.1;locus_tag=AD12_RS29850;partial=true;product=NadS family protein;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 83638 85305 . - . ID=gene-AD12_RS21635;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AD12_RS21635;old_locus_tag=AD12_0096 NZ_JJLK01000041.1 Protein Homology CDS 83638 85305 . - 0 ID=cds-WP_000046749.1;Parent=gene-AD12_RS21635;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AD12_RS21635;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 85516 87453 . + . ID=gene-AD12_RS21630;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AD12_RS21630;old_locus_tag=AD12_0097 NZ_JJLK01000041.1 Protein Homology CDS 85516 87453 . + 0 ID=cds-WP_000409451.1;Parent=gene-AD12_RS21630;Dbxref=GenBank:WP_000409451.1;Name=WP_000409451.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AD12_RS21630;product=murein transglycosylase;protein_id=WP_000409451.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 87543 87869 . + . ID=gene-AD12_RS21625;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AD12_RS21625;old_locus_tag=AD12_0098 NZ_JJLK01000041.1 Protein Homology CDS 87543 87869 . + 0 ID=cds-WP_000068679.1;Parent=gene-AD12_RS21625;Dbxref=GenBank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AD12_RS21625;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 87912 88424 . - . ID=gene-AD12_RS21620;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AD12_RS21620;old_locus_tag=AD12_0099 NZ_JJLK01000041.1 Protein Homology CDS 87912 88424 . - 0 ID=cds-WP_001346116.1;Parent=gene-AD12_RS21620;Dbxref=GenBank:WP_001346116.1;Name=WP_001346116.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AD12_RS21620;product=inosine/xanthosine triphosphatase;protein_id=WP_001346116.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 88476 89123 . + . ID=gene-AD12_RS21615;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AD12_RS21615;old_locus_tag=AD12_0100 NZ_JJLK01000041.1 Protein Homology CDS 88476 89123 . + 0 ID=cds-WP_000942344.1;Parent=gene-AD12_RS21615;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AD12_RS21615;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 89120 89989 . - . ID=gene-AD12_RS21610;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AD12_RS21610;old_locus_tag=AD12_0101 NZ_JJLK01000041.1 Protein Homology CDS 89120 89989 . - 0 ID=cds-WP_000371666.1;Parent=gene-AD12_RS21610;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AD12_RS21610;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 90200 90673 . + . ID=gene-AD12_RS21605;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AD12_RS21605;old_locus_tag=AD12_0102 NZ_JJLK01000041.1 Protein Homology CDS 90200 90673 . + 0 ID=cds-WP_000875487.1;Parent=gene-AD12_RS21605;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AD12_RS21605;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 90686 91375 . + . ID=gene-AD12_RS21600;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AD12_RS21600;old_locus_tag=AD12_0103 NZ_JJLK01000041.1 Protein Homology CDS 90686 91375 . + 0 ID=cds-WP_001680190.1;Parent=gene-AD12_RS21600;Dbxref=GenBank:WP_001680190.1;Name=WP_001680190.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AD12_RS21600;product=two-component system response regulator CreB;protein_id=WP_001680190.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 91375 92799 . + . ID=gene-AD12_RS21595;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AD12_RS21595;old_locus_tag=AD12_0104 NZ_JJLK01000041.1 Protein Homology CDS 91375 92799 . + 0 ID=cds-WP_001219614.1;Parent=gene-AD12_RS21595;Dbxref=GenBank:WP_001219614.1;Name=WP_001219614.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AD12_RS21595;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219614.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 92857 94209 . + . ID=gene-AD12_RS21590;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AD12_RS21590;old_locus_tag=AD12_0105 NZ_JJLK01000041.1 Protein Homology CDS 92857 94209 . + 0 ID=cds-WP_000920307.1;Parent=gene-AD12_RS21590;Dbxref=GenBank:WP_000920307.1;Name=WP_000920307.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313385.1;locus_tag=AD12_RS21590;product=cell envelope integrity protein CreD;protein_id=WP_000920307.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 94268 94984 . - . ID=gene-AD12_RS21585;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AD12_RS21585;old_locus_tag=AD12_0106 NZ_JJLK01000041.1 Protein Homology CDS 94268 94984 . - 0 ID=cds-WP_001194358.1;Parent=gene-AD12_RS21585;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AD12_RS21585;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 95080 95220 . + . ID=gene-AD12_RS0122980;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AD12_RS0122980 NZ_JJLK01000041.1 Protein Homology CDS 95080 95220 . + 0 ID=cds-WP_001303782.1;Parent=gene-AD12_RS0122980;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AD12_RS0122980;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 95620 96306 . + . ID=gene-AD12_RS21580;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AD12_RS21580;old_locus_tag=AD12_0107 NZ_JJLK01000041.1 Protein Homology CDS 95620 96306 . + 0 ID=cds-WP_001223151.1;Parent=gene-AD12_RS21580;Dbxref=GenBank:WP_001223151.1;Name=WP_001223151.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=AD12_RS21580;product=tRNA/rRNA methyltransferase;protein_id=WP_001223151.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 96520 96585 . + . ID=gene-AD12_RS0122985;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AD12_RS0122985 NZ_JJLK01000041.1 Protein Homology CDS 96520 96585 . + 0 ID=cds-WP_001386572.1;Parent=gene-AD12_RS0122985;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AD12_RS0122985;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JJLK01000041.1 cmsearch sequence_feature 96521 96640 . + . ID=id-NZ_JJLK01000041.1:96521..96640;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000041.1 RefSeq gene 96666 99128 . + . ID=gene-AD12_RS21575;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AD12_RS21575;old_locus_tag=AD12_0109 NZ_JJLK01000041.1 Protein Homology CDS 96666 99128 . + 0 ID=cds-WP_001264725.1;Parent=gene-AD12_RS21575;Dbxref=GenBank:WP_001264725.1;Name=WP_001264725.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AD12_RS21575;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264725.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 99130 100062 . + . ID=gene-AD12_RS21570;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AD12_RS21570;old_locus_tag=AD12_0110 NZ_JJLK01000041.1 Protein Homology CDS 99130 100062 . + 0 ID=cds-WP_000241660.1;Parent=gene-AD12_RS21570;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AD12_RS21570;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 100063 101349 . + . ID=gene-AD12_RS21565;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AD12_RS21565;old_locus_tag=AD12_0111 NZ_JJLK01000041.1 Protein Homology CDS 100063 101349 . + 0 ID=cds-WP_000781063.1;Parent=gene-AD12_RS21565;Dbxref=GenBank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AD12_RS21565;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 101563 101859 . + . ID=gene-AD12_RS0122995;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AD12_RS0122995 NZ_JJLK01000041.1 Protein Homology CDS 101563 101859 . + 0 ID=cds-WP_000738723.1;Parent=gene-AD12_RS0122995;Dbxref=GenBank:WP_000738723.1;Name=WP_000738723.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AD12_RS0122995;product=DUF2502 domain-containing protein;protein_id=WP_000738723.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 102012 102788 . - . ID=gene-AD12_RS21560;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AD12_RS21560;old_locus_tag=AD12_0113 NZ_JJLK01000041.1 Protein Homology CDS 102012 102788 . - 0 ID=cds-WP_000906183.1;Parent=gene-AD12_RS21560;Dbxref=GenBank:WP_000906183.1;Name=WP_000906183.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AD12_RS21560;product=peroxide stress protein YaaA;protein_id=WP_000906183.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 102858 104288 . - . ID=gene-AD12_RS21555;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AD12_RS21555;old_locus_tag=AD12_0114 NZ_JJLK01000041.1 Protein Homology CDS 102858 104288 . - 0 ID=cds-WP_001112597.1;Parent=gene-AD12_RS21555;Dbxref=GenBank:WP_001112597.1;Name=WP_001112597.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AD12_RS21555;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112597.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 104567 105520 . + . ID=gene-AD12_RS21550;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD12_RS21550;old_locus_tag=AD12_0115 NZ_JJLK01000041.1 Protein Homology CDS 104567 105520 . + 0 ID=cds-WP_000130185.1;Parent=gene-AD12_RS21550;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AD12_RS21550;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 105635 106222 . + . ID=gene-AD12_RS21545;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AD12_RS21545;old_locus_tag=AD12_0116 NZ_JJLK01000041.1 Protein Homology CDS 105635 106222 . + 0 ID=cds-WP_001094682.1;Parent=gene-AD12_RS21545;Dbxref=GenBank:WP_001094682.1;Name=WP_001094682.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AD12_RS21545;product=molybdopterin adenylyltransferase;protein_id=WP_001094682.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 106257 106823 . - . ID=gene-AD12_RS21540;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AD12_RS21540;old_locus_tag=AD12_0117 NZ_JJLK01000041.1 Protein Homology CDS 106257 106823 . - 0 ID=cds-WP_000528538.1;Parent=gene-AD12_RS21540;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AD12_RS21540;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 106972 107685 . - . ID=gene-AD12_RS21535;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AD12_RS21535;old_locus_tag=AD12_0118 NZ_JJLK01000041.1 Protein Homology CDS 106972 107685 . - 0 ID=cds-WP_001102383.1;Parent=gene-AD12_RS21535;Dbxref=GenBank:WP_001102383.1;Name=WP_001102383.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AD12_RS21535;product=acidic protein MsyB;protein_id=WP_001102383.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 107711 108115 . - . ID=gene-AD12_RS21530;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AD12_RS21530;old_locus_tag=AD12_0119 NZ_JJLK01000041.1 Protein Homology CDS 107711 108115 . - 0 ID=cds-WP_000843559.1;Parent=gene-AD12_RS21530;Dbxref=GenBank:WP_000843559.1;Name=WP_000843559.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AD12_RS21530;product=DUF2541 family protein;protein_id=WP_000843559.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 108492 110408 . + . ID=gene-AD12_RS21525;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AD12_RS21525;old_locus_tag=AD12_0120 NZ_JJLK01000041.1 Protein Homology CDS 108492 110408 . + 0 ID=cds-WP_000516131.1;Parent=gene-AD12_RS21525;Dbxref=GenBank:WP_000516131.1;Name=WP_000516131.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AD12_RS21525;product=molecular chaperone DnaK;protein_id=WP_000516131.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 110497 111627 . + . ID=gene-AD12_RS21520;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AD12_RS21520;old_locus_tag=AD12_0121 NZ_JJLK01000041.1 Protein Homology CDS 110497 111627 . + 0 ID=cds-WP_001118464.1;Parent=gene-AD12_RS21520;Dbxref=GenBank:WP_001118464.1;Name=WP_001118464.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AD12_RS21520;product=molecular chaperone DnaJ;protein_id=WP_001118464.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 111731 111883 . - . ID=gene-AD12_RS0123000;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AD12_RS0123000 NZ_JJLK01000041.1 Protein Homology CDS 111731 111883 . - 0 ID=cds-WP_000809168.1;Parent=gene-AD12_RS0123000;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AD12_RS0123000;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 112469 113635 . + . ID=gene-AD12_RS21515;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AD12_RS21515;old_locus_tag=AD12_0122 NZ_JJLK01000041.1 Protein Homology CDS 112469 113635 . + 0 ID=cds-WP_000681360.1;Parent=gene-AD12_RS21515;Dbxref=GenBank:WP_000681360.1;Name=WP_000681360.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AD12_RS21515;product=Na+/H+ antiporter NhaA;protein_id=WP_000681360.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 113701 114600 . + . ID=gene-AD12_RS21510;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AD12_RS21510;old_locus_tag=AD12_0123 NZ_JJLK01000041.1 Protein Homology CDS 113701 114600 . + 0 ID=cds-WP_001300855.1;Parent=gene-AD12_RS21510;Dbxref=GenBank:WP_001300855.1;Name=WP_001300855.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AD12_RS21510;product=transcriptional activator NhaR;protein_id=WP_001300855.1;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 114639 115597 . - . ID=gene-AD12_RS28500;Name=AD12_RS28500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28500;old_locus_tag=AD12_0124;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 114639 115597 . - 0 ID=cds-AD12_RS28500;Parent=gene-AD12_RS28500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AD12_RS28500;product=fimbrial family protein;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 115610 116941 . - . ID=gene-AD12_RS0123015;Name=AD12_RS0123015;end_range=116941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123015;partial=true;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 115610 116941 . - 0 ID=cds-AD12_RS0123015;Parent=gene-AD12_RS0123015;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=116941,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AD12_RS0123015;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 117188 118608 . - . ID=gene-AD12_RS0123020;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=pseudogene;locus_tag=AD12_RS0123020;old_locus_tag=AD12_0128;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 117188 118608 . - 0 ID=cds-AD12_RS0123020;Parent=gene-AD12_RS0123020;Note=frameshifted;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AD12_RS0123020;product=type III secretion system effector EspX1;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 119092 119355 . - . ID=gene-AD12_RS0123025;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AD12_RS0123025;old_locus_tag=AD12_0129 NZ_JJLK01000041.1 Protein Homology CDS 119092 119355 . - 0 ID=cds-WP_001274021.1;Parent=gene-AD12_RS0123025;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AD12_RS0123025;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 119458 119676 . + . ID=gene-AD12_RS0123030;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AD12_RS0123030 NZ_JJLK01000041.1 Protein Homology CDS 119458 119676 . + 0 ID=cds-WP_001295417.1;Parent=gene-AD12_RS0123030;Dbxref=GenBank:WP_001295417.1;Name=WP_001295417.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AD12_RS0123030;product=DUF2575 family protein;protein_id=WP_001295417.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 119684 120625 . + . ID=gene-AD12_RS21505;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AD12_RS21505;old_locus_tag=AD12_0130 NZ_JJLK01000041.1 Protein Homology CDS 119684 120625 . + 0 ID=cds-WP_000767329.1;Parent=gene-AD12_RS21505;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AD12_RS21505;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 120668 123484 . + . ID=gene-AD12_RS21500;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AD12_RS21500;old_locus_tag=AD12_0131 NZ_JJLK01000041.1 Protein Homology CDS 120668 123484 . + 0 ID=cds-WP_001286857.1;Parent=gene-AD12_RS21500;Dbxref=GenBank:WP_001286857.1;Name=WP_001286857.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AD12_RS21500;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 123484 123978 . + . ID=gene-AD12_RS21495;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AD12_RS21495;old_locus_tag=AD12_0132 NZ_JJLK01000041.1 Protein Homology CDS 123484 123978 . + 0 ID=cds-WP_000083369.1;Parent=gene-AD12_RS21495;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AD12_RS21495;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 124103 124552 . + . ID=gene-AD12_RS21490;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AD12_RS21490;old_locus_tag=AD12_0133 NZ_JJLK01000041.1 Protein Homology CDS 124103 124552 . + 0 ID=cds-WP_001389243.1;Parent=gene-AD12_RS21490;Dbxref=GenBank:WP_001389243.1;Name=WP_001389243.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AD12_RS21490;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_001389243.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 124554 125504 . + . ID=gene-AD12_RS21485;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AD12_RS21485;old_locus_tag=AD12_0134 NZ_JJLK01000041.1 Protein Homology CDS 124554 125504 . + 0 ID=cds-WP_001166404.1;Parent=gene-AD12_RS21485;Dbxref=GenBank:WP_001166404.1;Name=WP_001166404.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AD12_RS21485;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166404.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 125570 126484 . + . ID=gene-AD12_RS21480;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AD12_RS21480;old_locus_tag=AD12_0135 NZ_JJLK01000041.1 Protein Homology CDS 125570 126484 . + 0 ID=cds-WP_001239133.1;Parent=gene-AD12_RS21480;Dbxref=GenBank:WP_001239133.1;Name=WP_001239133.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AD12_RS21480;product=ribonucleoside hydrolase RihC;protein_id=WP_001239133.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 126651 127472 . + . ID=gene-AD12_RS21475;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AD12_RS21475;old_locus_tag=AD12_0136 NZ_JJLK01000041.1 Protein Homology CDS 126651 127472 . + 0 ID=cds-WP_000543605.1;Parent=gene-AD12_RS21475;Dbxref=GenBank:WP_000543605.1;Name=WP_000543605.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AD12_RS21475;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543605.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 127928 129076 . + . ID=gene-AD12_RS21470;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AD12_RS21470;old_locus_tag=AD12_0138 NZ_JJLK01000041.1 Protein Homology CDS 127928 129076 . + 0 ID=cds-WP_000597260.1;Parent=gene-AD12_RS21470;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AD12_RS21470;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 129094 132315 . + . ID=gene-AD12_RS21465;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AD12_RS21465;old_locus_tag=AD12_0139 NZ_JJLK01000041.1 Protein Homology CDS 129094 132315 . + 0 ID=cds-WP_001126376.1;Parent=gene-AD12_RS21465;Dbxref=GenBank:WP_001126376.1;Name=WP_001126376.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AD12_RS21465;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126376.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 132576 132971 . + . ID=gene-AD12_RS21455;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AD12_RS21455;old_locus_tag=AD12_0141 NZ_JJLK01000041.1 Protein Homology CDS 132576 132971 . + 0 ID=cds-WP_000333120.1;Parent=gene-AD12_RS21455;Dbxref=GenBank:WP_000333120.1;Name=WP_000333120.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AD12_RS21455;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333120.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 133057 133647 . - . ID=gene-AD12_RS21450;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AD12_RS21450;old_locus_tag=AD12_0142 NZ_JJLK01000041.1 Protein Homology CDS 133057 133647 . - 0 ID=cds-WP_000122876.1;Parent=gene-AD12_RS21450;Dbxref=GenBank:WP_000122876.1;Name=WP_000122876.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AD12_RS21450;product=carnitine operon protein CaiE;protein_id=WP_000122876.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 133653 134438 . - . ID=gene-AD12_RS21445;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AD12_RS21445;old_locus_tag=AD12_0143 NZ_JJLK01000041.1 Protein Homology CDS 133653 134438 . - 0 ID=cds-WP_000004404.1;Parent=gene-AD12_RS21445;Dbxref=GenBank:WP_000004404.1;Name=WP_000004404.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AD12_RS21445;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004404.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 134547 136100 . - . ID=gene-AD12_RS21440;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AD12_RS21440;old_locus_tag=AD12_0144 NZ_JJLK01000041.1 Protein Homology CDS 134547 136100 . - 0 ID=cds-WP_000351348.1;Parent=gene-AD12_RS21440;Dbxref=GenBank:WP_000351348.1;Name=WP_000351348.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308067.2;locus_tag=AD12_RS21440;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000351348.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 136174 137391 . - . ID=gene-AD12_RS21435;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AD12_RS21435;old_locus_tag=AD12_0145 NZ_JJLK01000041.1 Protein Homology CDS 136174 137391 . - 0 ID=cds-WP_032173347.1;Parent=gene-AD12_RS21435;Dbxref=GenBank:WP_032173347.1;Name=WP_032173347.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308068.1;locus_tag=AD12_RS21435;product=L-carnitine CoA-transferase;protein_id=WP_032173347.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 137520 138662 . - . ID=gene-AD12_RS21430;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AD12_RS21430;old_locus_tag=AD12_0146 NZ_JJLK01000041.1 Protein Homology CDS 137520 138662 . - 0 ID=cds-WP_000347117.1;Parent=gene-AD12_RS21430;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AD12_RS21430;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 138693 140207 . - . ID=gene-AD12_RS21425;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AD12_RS21425;old_locus_tag=AD12_0147 NZ_JJLK01000041.1 Protein Homology CDS 138693 140207 . - 0 ID=cds-WP_032286304.1;Parent=gene-AD12_RS21425;Dbxref=GenBank:WP_032286304.1;Name=WP_032286304.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AD12_RS21425;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_032286304.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 140681 141451 . + . ID=gene-AD12_RS21420;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AD12_RS21420;old_locus_tag=AD12_0148 NZ_JJLK01000041.1 Protein Homology CDS 140681 141451 . + 0 ID=cds-WP_000692204.1;Parent=gene-AD12_RS21420;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AD12_RS21420;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 141466 142407 . + . ID=gene-AD12_RS21415;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AD12_RS21415;old_locus_tag=AD12_0149 NZ_JJLK01000041.1 Protein Homology CDS 141466 142407 . + 0 ID=cds-WP_001091499.1;Parent=gene-AD12_RS21415;Dbxref=GenBank:WP_001091499.1;Name=WP_001091499.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AD12_RS21415;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001091499.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 142458 143744 . + . ID=gene-AD12_RS21410;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AD12_RS21410;old_locus_tag=AD12_0150 NZ_JJLK01000041.1 Protein Homology CDS 142458 143744 . + 0 ID=cds-WP_001287715.1;Parent=gene-AD12_RS21410;Dbxref=GenBank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AD12_RS21410;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 143741 144028 . + . ID=gene-AD12_RS21405;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AD12_RS21405;old_locus_tag=AD12_0151 NZ_JJLK01000041.1 Protein Homology CDS 143741 144028 . + 0 ID=cds-WP_000203747.1;Parent=gene-AD12_RS21405;Dbxref=GenBank:WP_000203747.1;Name=WP_000203747.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706000.1;locus_tag=AD12_RS21405;product=ferredoxin-like protein FixX;protein_id=WP_000203747.1;transl_table=11 NZ_JJLK01000041.1 RefSeq pseudogene 144086 145418 . + . ID=gene-AD12_RS21400;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=pseudogene;locus_tag=AD12_RS21400;old_locus_tag=AD12_0152;pseudo=true NZ_JJLK01000041.1 Protein Homology CDS 144086 145418 . + 0 ID=cds-AD12_RS21400;Parent=gene-AD12_RS21400;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AD12_RS21400;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 145526 146056 . + . ID=gene-AD12_RS21395;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AD12_RS21395;old_locus_tag=AD12_0153 NZ_JJLK01000041.1 Protein Homology CDS 145526 146056 . + 0 ID=cds-WP_000600725.1;Parent=gene-AD12_RS21395;Dbxref=GenBank:WP_000600725.1;Name=WP_000600725.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=AD12_RS21395;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 146049 147911 . + . ID=gene-AD12_RS21390;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AD12_RS21390;old_locus_tag=AD12_0154 NZ_JJLK01000041.1 Protein Homology CDS 146049 147911 . + 0 ID=cds-WP_000377129.1;Parent=gene-AD12_RS21390;Dbxref=GenBank:WP_000377129.1;Name=WP_000377129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AD12_RS21390;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377129.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 148103 148582 . + . ID=gene-AD12_RS21385;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AD12_RS21385;old_locus_tag=AD12_0155 NZ_JJLK01000041.1 Protein Homology CDS 148103 148582 . + 0 ID=cds-WP_000624375.1;Parent=gene-AD12_RS21385;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AD12_RS21385;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 148660 149502 . - . ID=gene-AD12_RS21380;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AD12_RS21380;old_locus_tag=AD12_0156 NZ_JJLK01000041.1 Protein Homology CDS 148660 149502 . - 0 ID=cds-WP_000257192.1;Parent=gene-AD12_RS21380;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AD12_RS21380;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 149509 149886 . - . ID=gene-AD12_RS21375;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AD12_RS21375;old_locus_tag=AD12_0157 NZ_JJLK01000041.1 Protein Homology CDS 149509 149886 . - 0 ID=cds-WP_000610901.1;Parent=gene-AD12_RS21375;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AD12_RS21375;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 149889 150710 . - . ID=gene-AD12_RS21370;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AD12_RS21370;old_locus_tag=AD12_0158 NZ_JJLK01000041.1 Protein Homology CDS 149889 150710 . - 0 ID=cds-WP_001065381.1;Parent=gene-AD12_RS21370;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AD12_RS21370;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 150707 151696 . - . ID=gene-AD12_RS21365;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AD12_RS21365;old_locus_tag=AD12_0159 NZ_JJLK01000041.1 Protein Homology CDS 150707 151696 . - 0 ID=cds-WP_000241271.1;Parent=gene-AD12_RS21365;Dbxref=GenBank:WP_000241271.1;Name=WP_000241271.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308084.1;locus_tag=AD12_RS21365;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241271.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 151696 152982 . - . ID=gene-AD12_RS21360;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AD12_RS21360;old_locus_tag=AD12_0160 NZ_JJLK01000041.1 Protein Homology CDS 151696 152982 . - 0 ID=cds-WP_000800453.1;Parent=gene-AD12_RS21360;Dbxref=GenBank:WP_000800453.1;Name=WP_000800453.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AD12_RS21360;product=peptidylprolyl isomerase SurA;protein_id=WP_000800453.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 153035 155389 . - . ID=gene-AD12_RS21355;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AD12_RS21355;old_locus_tag=AD12_0161 NZ_JJLK01000041.1 Protein Homology CDS 153035 155389 . - 0 ID=cds-WP_000746150.1;Parent=gene-AD12_RS21355;Dbxref=GenBank:WP_000746150.1;Name=WP_000746150.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AD12_RS21355;product=LPS assembly protein LptD;protein_id=WP_000746150.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 155644 156459 . + . ID=gene-AD12_RS21350;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AD12_RS21350;old_locus_tag=AD12_0162 NZ_JJLK01000041.1 Protein Homology CDS 155644 156459 . + 0 ID=cds-WP_032286306.1;Parent=gene-AD12_RS21350;Dbxref=GenBank:WP_032286306.1;Name=WP_032286306.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AD12_RS21350;product=co-chaperone DjlA;protein_id=WP_032286306.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 156576 157235 . - . ID=gene-AD12_RS21345;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AD12_RS21345;old_locus_tag=AD12_0163 NZ_JJLK01000041.1 Protein Homology CDS 156576 157235 . - 0 ID=cds-WP_000525176.1;Parent=gene-AD12_RS21345;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AD12_RS21345;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 157247 160153 . - . ID=gene-AD12_RS21340;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AD12_RS21340;old_locus_tag=AD12_0164 NZ_JJLK01000041.1 Protein Homology CDS 157247 160153 . - 0 ID=cds-WP_001117011.1;Parent=gene-AD12_RS21340;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AD12_RS21340;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 160318 162669 . - . ID=gene-AD12_RS21335;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AD12_RS21335;old_locus_tag=AD12_0165 NZ_JJLK01000041.1 Protein Homology CDS 160318 162669 . - 0 ID=cds-WP_032173350.1;Parent=gene-AD12_RS21335;Dbxref=GenBank:WP_032173350.1;Name=WP_032173350.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=AD12_RS21335;product=DNA polymerase II;protein_id=WP_032173350.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 162744 163439 . - . ID=gene-AD12_RS21330;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD12_RS21330;old_locus_tag=AD12_0166 NZ_JJLK01000041.1 Protein Homology CDS 162744 163439 . - 0 ID=cds-WP_000888642.1;Parent=gene-AD12_RS21330;Dbxref=GenBank:WP_000888642.1;Name=WP_000888642.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AD12_RS21330;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888642.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 163639 165141 . - . ID=gene-AD12_RS21325;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AD12_RS21325;old_locus_tag=AD12_0167 NZ_JJLK01000041.1 Protein Homology CDS 163639 165141 . - 0 ID=cds-WP_000151734.1;Parent=gene-AD12_RS21325;Dbxref=GenBank:WP_000151734.1;Name=WP_000151734.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AD12_RS21325;product=L-arabinose isomerase;protein_id=WP_000151734.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 165152 166852 . - . ID=gene-AD12_RS21320;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AD12_RS21320;old_locus_tag=AD12_0168 NZ_JJLK01000041.1 Protein Homology CDS 165152 166852 . - 0 ID=cds-WP_032286307.1;Parent=gene-AD12_RS21320;Dbxref=GenBank:WP_032286307.1;Name=WP_032286307.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AD12_RS21320;product=ribulokinase;protein_id=WP_032286307.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 167191 168069 . + . ID=gene-AD12_RS21315;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AD12_RS21315;old_locus_tag=AD12_0169 NZ_JJLK01000041.1 Protein Homology CDS 167191 168069 . + 0 ID=cds-WP_001300811.1;Parent=gene-AD12_RS21315;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AD12_RS21315;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 168155 168919 . + . ID=gene-AD12_RS21310;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AD12_RS21310;old_locus_tag=AD12_0170 NZ_JJLK01000041.1 Protein Homology CDS 168155 168919 . + 0 ID=cds-WP_001148402.1;Parent=gene-AD12_RS21310;Dbxref=GenBank:WP_001148402.1;Name=WP_001148402.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148402.1;locus_tag=AD12_RS21310;product=DedA family protein;protein_id=WP_001148402.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 169033 169731 . - . ID=gene-AD12_RS21305;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AD12_RS21305;old_locus_tag=AD12_0171 NZ_JJLK01000041.1 Protein Homology CDS 169033 169731 . - 0 ID=cds-WP_000916291.1;Parent=gene-AD12_RS21305;Dbxref=GenBank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=AD12_RS21305;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 169715 171325 . - . ID=gene-AD12_RS21300;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AD12_RS21300;old_locus_tag=AD12_0172 NZ_JJLK01000041.1 Protein Homology CDS 169715 171325 . - 0 ID=cds-WP_000235700.1;Parent=gene-AD12_RS21300;Dbxref=GenBank:WP_000235700.1;Name=WP_000235700.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=AD12_RS21300;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235700.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 171301 172284 . - . ID=gene-AD12_RS21295;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AD12_RS21295;old_locus_tag=AD12_0173 NZ_JJLK01000041.1 Protein Homology CDS 171301 172284 . - 0 ID=cds-WP_001295536.1;Parent=gene-AD12_RS21295;Dbxref=GenBank:WP_001295536.1;Name=WP_001295536.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706021.2;locus_tag=AD12_RS21295;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001295536.1;transl_table=11 NZ_JJLK01000041.1 cmsearch riboswitch 172315 172414 . - . ID=id-NZ_JJLK01000041.1:172315..172414;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000041.1 RefSeq gene 172448 174103 . - . ID=gene-AD12_RS21290;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AD12_RS21290;old_locus_tag=AD12_0174 NZ_JJLK01000041.1 Protein Homology CDS 172448 174103 . - 0 ID=cds-WP_001297366.1;Parent=gene-AD12_RS21290;Dbxref=GenBank:WP_001297366.1;Name=WP_001297366.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706022.2;locus_tag=AD12_RS21290;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001297366.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 174192 174323 . + . ID=gene-AD12_RS21285;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AD12_RS21285;old_locus_tag=AD12_0175 NZ_JJLK01000041.1 Protein Homology CDS 174192 174323 . + 0 ID=cds-WP_001248770.1;Parent=gene-AD12_RS21285;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AD12_RS21285;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 174425 175603 . + . ID=gene-AD12_RS21280;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AD12_RS21280;old_locus_tag=AD12_0176 NZ_JJLK01000041.1 Protein Homology CDS 174425 175603 . + 0 ID=cds-WP_000637846.1;Parent=gene-AD12_RS21280;Dbxref=GenBank:WP_000637846.1;Name=WP_000637846.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AD12_RS21280;product=sugar efflux transporter SetA;protein_id=WP_000637846.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 175652 176257 . - . ID=gene-AD12_RS21275;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AD12_RS21275;old_locus_tag=AD12_0177 NZ_JJLK01000041.1 Protein Homology CDS 175652 176257 . - 0 ID=cds-WP_000818228.1;Parent=gene-AD12_RS21275;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AD12_RS21275;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 176268 177668 . - . ID=gene-AD12_RS21270;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AD12_RS21270;old_locus_tag=AD12_0178 NZ_JJLK01000041.1 Protein Homology CDS 176268 177668 . - 0 ID=cds-WP_001140652.1;Parent=gene-AD12_RS21270;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AD12_RS21270;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 177671 178762 . - . ID=gene-AD12_RS21265;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AD12_RS21265;old_locus_tag=AD12_0179 NZ_JJLK01000041.1 Protein Homology CDS 177671 178762 . - 0 ID=cds-WP_000042353.1;Parent=gene-AD12_RS21265;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AD12_RS21265;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 178762 180333 . - . ID=gene-AD12_RS21260;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AD12_RS21260;old_locus_tag=AD12_0180 NZ_JJLK01000041.1 Protein Homology CDS 178762 180333 . - 0 ID=cds-WP_000082846.1;Parent=gene-AD12_RS21260;Dbxref=GenBank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AD12_RS21260;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 180426 180512 . - . ID=gene-AD12_RS0123045;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AD12_RS0123045 NZ_JJLK01000041.1 Protein Homology CDS 180426 180512 . - 0 ID=cds-WP_001300467.1;Parent=gene-AD12_RS0123045;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AD12_RS0123045;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 181172 182116 . + . ID=gene-AD12_RS21255;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AD12_RS21255;old_locus_tag=AD12_0182 NZ_JJLK01000041.1 Protein Homology CDS 181172 182116 . + 0 ID=cds-WP_001297362.1;Parent=gene-AD12_RS21255;Dbxref=GenBank:WP_001297362.1;Name=WP_001297362.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AD12_RS21255;product=transcriptional regulator LeuO;protein_id=WP_001297362.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 182271 182315 . - . ID=gene-AD12_RS29000;Name=AD12_RS29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29000 NZ_JJLK01000041.1 Protein Homology CDS 182271 182315 . - 0 ID=cds-WP_128566915.1;Parent=gene-AD12_RS29000;Dbxref=GenBank:WP_128566915.1;Name=WP_128566915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AD12_RS29000;product=hypothetical protein;protein_id=WP_128566915.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 182434 184158 . + . ID=gene-AD12_RS21250;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AD12_RS21250;old_locus_tag=AD12_0184 NZ_JJLK01000041.1 Protein Homology CDS 182434 184158 . + 0 ID=cds-WP_000425657.1;Parent=gene-AD12_RS21250;Dbxref=GenBank:WP_000425657.1;Name=WP_000425657.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AD12_RS21250;product=acetolactate synthase 3 large subunit;protein_id=WP_000425657.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 184161 184652 . + . ID=gene-AD12_RS21245;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD12_RS21245;old_locus_tag=AD12_0185 NZ_JJLK01000041.1 Protein Homology CDS 184161 184652 . + 0 ID=cds-WP_001252744.1;Parent=gene-AD12_RS21245;Dbxref=GenBank:WP_001252744.1;Name=WP_001252744.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AD12_RS21245;product=acetolactate synthase small subunit;protein_id=WP_001252744.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 184664 184750 . + . ID=gene-AD12_RS0123050;Name=AD12_RS0123050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123050 NZ_JJLK01000041.1 Protein Homology CDS 184664 184750 . + 0 ID=cds-WP_001303787.1;Parent=gene-AD12_RS0123050;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AD12_RS0123050;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 184832 185836 . + . ID=gene-AD12_RS21240;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AD12_RS21240;old_locus_tag=AD12_0186 NZ_JJLK01000041.1 Protein Homology CDS 184832 185836 . + 0 ID=cds-WP_000762401.1;Parent=gene-AD12_RS21240;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AD12_RS21240;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 186438 186896 . + . ID=gene-AD12_RS21235;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AD12_RS21235;old_locus_tag=AD12_0188 NZ_JJLK01000041.1 Protein Homology CDS 186438 186896 . + 0 ID=cds-WP_001295770.1;Parent=gene-AD12_RS21235;Dbxref=GenBank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AD12_RS21235;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 186898 187839 . + . ID=gene-AD12_RS21230;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AD12_RS21230;old_locus_tag=AD12_0189 NZ_JJLK01000041.1 Protein Homology CDS 186898 187839 . + 0 ID=cds-WP_000970479.1;Parent=gene-AD12_RS21230;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AD12_RS21230;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 187836 188201 . + . ID=gene-AD12_RS0123055;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AD12_RS0123055 NZ_JJLK01000041.1 Protein Homology CDS 187836 188201 . + 0 ID=cds-WP_000625658.1;Parent=gene-AD12_RS0123055;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AD12_RS0123055;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 188217 189983 . + . ID=gene-AD12_RS21225;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AD12_RS21225;old_locus_tag=AD12_0191 NZ_JJLK01000041.1 Protein Homology CDS 188217 189983 . + 0 ID=cds-WP_000642196.1;Parent=gene-AD12_RS21225;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AD12_RS21225;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 189970 191457 . + . ID=gene-AD12_RS21220;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AD12_RS21220;old_locus_tag=AD12_0192 NZ_JJLK01000041.1 Protein Homology CDS 189970 191457 . + 0 ID=cds-WP_000785152.1;Parent=gene-AD12_RS21220;Dbxref=GenBank:WP_000785152.1;Name=WP_000785152.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308116.1;locus_tag=AD12_RS21220;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000785152.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 191454 192812 . + . ID=gene-AD12_RS21215;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AD12_RS21215;old_locus_tag=AD12_0193 NZ_JJLK01000041.1 Protein Homology CDS 191454 192812 . + 0 ID=cds-WP_000626688.1;Parent=gene-AD12_RS21215;Dbxref=GenBank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AD12_RS21215;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 192806 193888 . + . ID=gene-AD12_RS21210;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AD12_RS21210;old_locus_tag=AD12_0194 NZ_JJLK01000041.1 Protein Homology CDS 192806 193888 . + 0 ID=cds-WP_000964131.1;Parent=gene-AD12_RS21210;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AD12_RS21210;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 193891 195207 . + . ID=gene-AD12_RS21205;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AD12_RS21205;old_locus_tag=AD12_0195 NZ_JJLK01000041.1 Protein Homology CDS 193891 195207 . + 0 ID=cds-WP_000796480.1;Parent=gene-AD12_RS21205;Dbxref=GenBank:WP_000796480.1;Name=WP_000796480.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AD12_RS21205;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796480.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 195207 196451 . + . ID=gene-AD12_RS21200;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AD12_RS21200;old_locus_tag=AD12_0196 NZ_JJLK01000041.1 Protein Homology CDS 195207 196451 . + 0 ID=cds-WP_001295532.1;Parent=gene-AD12_RS21200;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AD12_RS21200;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 196448 197515 . + . ID=gene-AD12_RS21195;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AD12_RS21195;old_locus_tag=AD12_0197 NZ_JJLK01000041.1 Protein Homology CDS 196448 197515 . + 0 ID=cds-WP_000016559.1;Parent=gene-AD12_RS21195;Dbxref=GenBank:WP_000016559.1;Name=WP_000016559.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308121.1;locus_tag=AD12_RS21195;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016559.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 197569 199044 . + . ID=gene-AD12_RS21190;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AD12_RS21190;old_locus_tag=AD12_0198 NZ_JJLK01000041.1 Protein Homology CDS 197569 199044 . + 0 ID=cds-WP_032178892.1;Parent=gene-AD12_RS21190;Dbxref=GenBank:WP_032178892.1;Name=WP_032178892.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AD12_RS21190;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_032178892.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 199037 199957 . + . ID=gene-AD12_RS21185;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AD12_RS21185;old_locus_tag=AD12_0199 NZ_JJLK01000041.1 Protein Homology CDS 199037 199957 . + 0 ID=cds-WP_000130056.1;Parent=gene-AD12_RS21185;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AD12_RS21185;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 199959 200789 . + . ID=gene-AD12_RS21180;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AD12_RS21180;old_locus_tag=AD12_0200 NZ_JJLK01000041.1 Protein Homology CDS 199959 200789 . + 0 ID=cds-WP_000075748.1;Parent=gene-AD12_RS21180;Dbxref=GenBank:WP_000075748.1;Name=WP_000075748.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414635.1;locus_tag=AD12_RS21180;product=cell division protein FtsQ;protein_id=WP_000075748.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 200786 202048 . + . ID=gene-AD12_RS21175;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AD12_RS21175;old_locus_tag=AD12_0201 NZ_JJLK01000041.1 Protein Homology CDS 200786 202048 . + 0 ID=cds-WP_001425111.1;Parent=gene-AD12_RS21175;Dbxref=GenBank:WP_001425111.1;Name=WP_001425111.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AD12_RS21175;product=cell division protein FtsA;protein_id=WP_001425111.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 202109 203260 . + . ID=gene-AD12_RS21170;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AD12_RS21170;old_locus_tag=AD12_0202 NZ_JJLK01000041.1 Protein Homology CDS 202109 203260 . + 0 ID=cds-WP_000462776.1;Parent=gene-AD12_RS21170;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AD12_RS21170;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 203361 204278 . + . ID=gene-AD12_RS21165;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AD12_RS21165;old_locus_tag=AD12_0203 NZ_JJLK01000041.1 Protein Homology CDS 203361 204278 . + 0 ID=cds-WP_000595482.1;Parent=gene-AD12_RS21165;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AD12_RS21165;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 204509 205021 . + . ID=gene-AD12_RS21160;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AD12_RS21160;old_locus_tag=AD12_0204 NZ_JJLK01000041.1 Protein Homology CDS 204509 205021 . + 0 ID=cds-WP_000014321.1;Parent=gene-AD12_RS21160;Dbxref=GenBank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AD12_RS21160;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 205083 207788 . + . ID=gene-AD12_RS21155;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AD12_RS21155;old_locus_tag=AD12_0205 NZ_JJLK01000041.1 Protein Homology CDS 205083 207788 . + 0 ID=cds-WP_000905780.1;Parent=gene-AD12_RS21155;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AD12_RS21155;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 207848 208237 . + . ID=gene-AD12_RS21150;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AD12_RS21150;old_locus_tag=AD12_0206 NZ_JJLK01000041.1 Protein Homology CDS 207848 208237 . + 0 ID=cds-WP_000736009.1;Parent=gene-AD12_RS21150;Dbxref=GenBank:WP_000736009.1;Name=WP_000736009.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AD12_RS21150;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736009.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 208453 208650 . - . ID=gene-AD12_RS21145;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AD12_RS21145;old_locus_tag=AD12_0207 NZ_JJLK01000041.1 Protein Homology CDS 208453 208650 . - 0 ID=cds-WP_000005042.1;Parent=gene-AD12_RS21145;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AD12_RS21145;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 208660 209403 . - . ID=gene-AD12_RS21140;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AD12_RS21140;old_locus_tag=AD12_0208 NZ_JJLK01000041.1 Protein Homology CDS 208660 209403 . - 0 ID=cds-WP_001194734.1;Parent=gene-AD12_RS21140;Dbxref=GenBank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AD12_RS21140;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 209403 210023 . - . ID=gene-AD12_RS21135;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AD12_RS21135;old_locus_tag=AD12_0209 NZ_JJLK01000041.1 Protein Homology CDS 209403 210023 . - 0 ID=cds-WP_001269520.1;Parent=gene-AD12_RS21135;Dbxref=GenBank:WP_001269520.1;Name=WP_001269520.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AD12_RS21135;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 210048 210092 . + . ID=gene-AD12_RS29005;Name=AD12_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29005 NZ_JJLK01000041.1 Protein Homology CDS 210048 210092 . + 0 ID=cds-WP_120795372.1;Parent=gene-AD12_RS29005;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AD12_RS29005;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 210248 211291 . + . ID=gene-AD12_RS21130;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AD12_RS21130;old_locus_tag=AD12_0210 NZ_JJLK01000041.1 Protein Homology CDS 210248 211291 . + 0 ID=cds-WP_001217342.1;Parent=gene-AD12_RS21130;Dbxref=GenBank:WP_001217342.1;Name=WP_001217342.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AD12_RS21130;product=GMP reductase;protein_id=WP_001217342.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 211326 212528 . - . ID=gene-AD12_RS21125;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AD12_RS21125;old_locus_tag=AD12_0211 NZ_JJLK01000041.1 Protein Homology CDS 211326 212528 . - 0 ID=cds-WP_000157227.1;Parent=gene-AD12_RS21125;Dbxref=GenBank:WP_000157227.1;Name=WP_000157227.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706061.1;locus_tag=AD12_RS21125;product=protein transport protein HofC;protein_id=WP_000157227.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 212518 213903 . - . ID=gene-AD12_RS21120;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD12_RS21120;old_locus_tag=AD12_0212 NZ_JJLK01000041.1 Protein Homology CDS 212518 213903 . - 0 ID=cds-WP_032286309.1;Parent=gene-AD12_RS21120;Dbxref=GenBank:WP_032286309.1;Name=WP_032286309.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=AD12_RS21120;product=type II secretion system protein GspE;protein_id=WP_032286309.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 213913 214353 . - . ID=gene-AD12_RS21115;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AD12_RS21115;old_locus_tag=AD12_0213 NZ_JJLK01000041.1 Protein Homology CDS 213913 214353 . - 0 ID=cds-WP_000360895.1;Parent=gene-AD12_RS21115;Dbxref=GenBank:WP_000360895.1;Name=WP_000360895.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AD12_RS21115;product=prepilin peptidase-dependent pilin;protein_id=WP_000360895.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 214556 215449 . - . ID=gene-AD12_RS21110;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AD12_RS21110;old_locus_tag=AD12_0214 NZ_JJLK01000041.1 Protein Homology CDS 214556 215449 . - 0 ID=cds-WP_001135174.1;Parent=gene-AD12_RS21110;Dbxref=GenBank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AD12_RS21110;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 215537 216088 . + . ID=gene-AD12_RS21105;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AD12_RS21105;old_locus_tag=AD12_0215 NZ_JJLK01000041.1 Protein Homology CDS 215537 216088 . + 0 ID=cds-WP_000923721.1;Parent=gene-AD12_RS21105;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AD12_RS21105;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 216085 216939 . + . ID=gene-AD12_RS21100;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AD12_RS21100;old_locus_tag=AD12_0216 NZ_JJLK01000041.1 Protein Homology CDS 216085 216939 . + 0 ID=cds-WP_001371446.1;Parent=gene-AD12_RS21100;Dbxref=GenBank:WP_001371446.1;Name=WP_001371446.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AD12_RS21100;product=beta-lactamase regulator AmpE;protein_id=WP_001371446.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 216982 218355 . - . ID=gene-AD12_RS21095;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AD12_RS21095;old_locus_tag=AD12_0217 NZ_JJLK01000041.1 Protein Homology CDS 216982 218355 . - 0 ID=cds-WP_000969915.1;Parent=gene-AD12_RS21095;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AD12_RS21095;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 218896 219660 . + . ID=gene-AD12_RS21090;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AD12_RS21090;old_locus_tag=AD12_0218 NZ_JJLK01000041.1 Protein Homology CDS 218896 219660 . + 0 ID=cds-WP_000331776.1;Parent=gene-AD12_RS21090;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AD12_RS21090;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 219821 222484 . + . ID=gene-AD12_RS21085;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AD12_RS21085;old_locus_tag=AD12_0219 NZ_JJLK01000041.1 Protein Homology CDS 219821 222484 . + 0 ID=cds-WP_000003820.1;Parent=gene-AD12_RS21085;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AD12_RS21085;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 222499 224391 . + . ID=gene-AD12_RS21080;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AD12_RS21080;old_locus_tag=AD12_0220 NZ_JJLK01000041.1 Protein Homology CDS 222499 224391 . + 0 ID=cds-WP_000963518.1;Parent=gene-AD12_RS21080;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AD12_RS21080;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 224599 226023 . + . ID=gene-AD12_RS21075;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AD12_RS21075;old_locus_tag=AD12_0221 NZ_JJLK01000041.1 Protein Homology CDS 224599 226023 . + 0 ID=cds-WP_000102485.1;Parent=gene-AD12_RS21075;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AD12_RS21075;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 226094 228196 . - . ID=gene-AD12_RS21070;Name=AD12_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS21070;old_locus_tag=AD12_0222 NZ_JJLK01000041.1 Protein Homology CDS 226094 228196 . - 0 ID=cds-WP_032286310.1;Parent=gene-AD12_RS21070;Dbxref=GenBank:WP_032286310.1;Name=WP_032286310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569928.1;locus_tag=AD12_RS21070;product=DUF3300 domain-containing protein;protein_id=WP_032286310.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 228551 231148 . + . ID=gene-AD12_RS21065;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AD12_RS21065;old_locus_tag=AD12_0223 NZ_JJLK01000041.1 Protein Homology CDS 228551 231148 . + 0 ID=cds-WP_001307570.1;Parent=gene-AD12_RS21065;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AD12_RS21065;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 231323 231685 . + . ID=gene-AD12_RS21060;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AD12_RS21060;old_locus_tag=AD12_0224 NZ_JJLK01000041.1 Protein Homology CDS 231323 231685 . + 0 ID=cds-WP_000384306.1;Parent=gene-AD12_RS21060;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AD12_RS21060;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 231723 232517 . - . ID=gene-AD12_RS21055;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AD12_RS21055;old_locus_tag=AD12_0225 NZ_JJLK01000041.1 Protein Homology CDS 231723 232517 . - 0 ID=cds-WP_000734287.1;Parent=gene-AD12_RS21055;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AD12_RS21055;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 232533 233399 . - . ID=gene-AD12_RS21050;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AD12_RS21050;old_locus_tag=AD12_0226 NZ_JJLK01000041.1 Protein Homology CDS 232533 233399 . - 0 ID=cds-WP_000818428.1;Parent=gene-AD12_RS21050;Dbxref=GenBank:WP_000818428.1;Name=WP_000818428.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AD12_RS21050;product=polyamine aminopropyltransferase;protein_id=WP_000818428.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 233505 233852 . - . ID=gene-AD12_RS21045;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AD12_RS21045;old_locus_tag=AD12_0227 NZ_JJLK01000041.1 Protein Homology CDS 233505 233852 . - 0 ID=cds-WP_001295568.1;Parent=gene-AD12_RS21045;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AD12_RS21045;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 234018 235568 . + . ID=gene-AD12_RS21040;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AD12_RS21040;old_locus_tag=AD12_0228 NZ_JJLK01000041.1 Protein Homology CDS 234018 235568 . + 0 ID=cds-WP_001189623.1;Parent=gene-AD12_RS21040;Dbxref=GenBank:WP_001189623.1;Name=WP_001189623.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AD12_RS21040;product=multicopper oxidase CueO;protein_id=WP_001189623.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 235770 238160 . - . ID=gene-AD12_RS21035;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AD12_RS21035;old_locus_tag=AD12_0230 NZ_JJLK01000041.1 Protein Homology CDS 235770 238160 . - 0 ID=cds-WP_001324194.1;Parent=gene-AD12_RS21035;Dbxref=GenBank:WP_001324194.1;Name=WP_001324194.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AD12_RS21035;product=quinoprotein glucose dehydrogenase;protein_id=WP_001324194.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 238366 238902 . + . ID=gene-AD12_RS21030;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AD12_RS21030;old_locus_tag=AD12_0231 NZ_JJLK01000041.1 Protein Homology CDS 238366 238902 . + 0 ID=cds-WP_000683335.1;Parent=gene-AD12_RS21030;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AD12_RS21030;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 238943 239605 . - . ID=gene-AD12_RS21025;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AD12_RS21025;old_locus_tag=AD12_0232 NZ_JJLK01000041.1 Protein Homology CDS 238943 239605 . - 0 ID=cds-WP_000651599.1;Parent=gene-AD12_RS21025;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AD12_RS21025;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 239714 240640 . + . ID=gene-AD12_RS21020;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AD12_RS21020;old_locus_tag=AD12_0233 NZ_JJLK01000041.1 Protein Homology CDS 239714 240640 . + 0 ID=cds-WP_000150637.1;Parent=gene-AD12_RS21020;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AD12_RS21020;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 240637 241407 . + . ID=gene-AD12_RS21015;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AD12_RS21015;old_locus_tag=AD12_0234 NZ_JJLK01000041.1 Protein Homology CDS 240637 241407 . + 0 ID=cds-WP_000972203.1;Parent=gene-AD12_RS21015;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AD12_RS21015;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 241512 241952 . + . ID=gene-AD12_RS0123070;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AD12_RS0123070;old_locus_tag=AD12_0235 NZ_JJLK01000041.1 Protein Homology CDS 241512 241952 . + 0 ID=cds-WP_000901987.1;Parent=gene-AD12_RS0123070;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AD12_RS0123070;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 242016 243245 . + . ID=gene-AD12_RS21010;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AD12_RS21010;old_locus_tag=AD12_0236 NZ_JJLK01000041.1 Protein Homology CDS 242016 243245 . + 0 ID=cds-WP_000277872.1;Parent=gene-AD12_RS21010;Dbxref=GenBank:WP_000277872.1;Name=WP_000277872.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AD12_RS21010;product=polysaccharide deacetylase family protein;protein_id=WP_000277872.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 243249 243629 . - . ID=gene-AD12_RS21005;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AD12_RS21005;old_locus_tag=AD12_0237 NZ_JJLK01000041.1 Protein Homology CDS 243249 243629 . - 0 ID=cds-WP_000621515.1;Parent=gene-AD12_RS21005;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AD12_RS21005;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 243903 244805 . + . ID=gene-AD12_RS21000;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AD12_RS21000;old_locus_tag=AD12_0239 NZ_JJLK01000041.1 Protein Homology CDS 243903 244805 . + 0 ID=cds-WP_000339944.1;Parent=gene-AD12_RS21000;Dbxref=GenBank:WP_000339944.1;Name=WP_000339944.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AD12_RS21000;product=recombination-promoting nuclease RpnC;protein_id=WP_000339944.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 244879 245730 . - . ID=gene-AD12_RS20995;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AD12_RS20995;old_locus_tag=AD12_0240 NZ_JJLK01000041.1 Protein Homology CDS 244879 245730 . - 0 ID=cds-WP_000905383.1;Parent=gene-AD12_RS20995;Dbxref=GenBank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AD12_RS20995;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 245742 246536 . - . ID=gene-AD12_RS20990;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AD12_RS20990;old_locus_tag=AD12_0241 NZ_JJLK01000041.1 Protein Homology CDS 245742 246536 . - 0 ID=cds-WP_000805445.1;Parent=gene-AD12_RS20990;Dbxref=GenBank:WP_000805445.1;Name=WP_000805445.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AD12_RS20990;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805445.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 246649 247992 . - . ID=gene-AD12_RS20985;Name=AD12_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20985;old_locus_tag=AD12_0242 NZ_JJLK01000041.1 Protein Homology CDS 246649 247992 . - 0 ID=cds-WP_001331232.1;Parent=gene-AD12_RS20985;Dbxref=GenBank:WP_001331232.1;Name=WP_001331232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462196.1;locus_tag=AD12_RS20985;product=fimbrial-like adhesin;protein_id=WP_001331232.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 247976 248572 . - . ID=gene-AD12_RS20980;Name=AD12_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20980;old_locus_tag=AD12_0243 NZ_JJLK01000041.1 Protein Homology CDS 247976 248572 . - 0 ID=cds-WP_000553764.1;Parent=gene-AD12_RS20980;Dbxref=GenBank:WP_000553764.1;Name=WP_000553764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AD12_RS20980;product=fimbrial-like protein;protein_id=WP_000553764.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 248599 249201 . - . ID=gene-AD12_RS20975;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AD12_RS20975;old_locus_tag=AD12_0244 NZ_JJLK01000041.1 Protein Homology CDS 248599 249201 . - 0 ID=cds-WP_000143205.1;Parent=gene-AD12_RS20975;Dbxref=GenBank:WP_000143205.1;Name=WP_000143205.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143198.1;locus_tag=AD12_RS20975;product=fimbrial-like protein YadL;protein_id=WP_000143205.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 249216 249785 . - . ID=gene-AD12_RS0123075;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;locus_tag=AD12_RS0123075 NZ_JJLK01000041.1 Protein Homology CDS 249216 249785 . - 0 ID=cds-WP_000591057.1;Parent=gene-AD12_RS0123075;Dbxref=GenBank:WP_000591057.1;Name=WP_000591057.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadM;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AD12_RS0123075;product=fimbrial protein;protein_id=WP_000591057.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 249802 252402 . - . ID=gene-AD12_RS20970;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AD12_RS20970;old_locus_tag=AD12_0247 NZ_JJLK01000041.1 Protein Homology CDS 249802 252402 . - 0 ID=cds-WP_001739066.1;Parent=gene-AD12_RS20970;Dbxref=GenBank:WP_001739066.1;Name=WP_001739066.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AD12_RS20970;product=Yad fimbria usher protein HtrE;protein_id=WP_001739066.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 252437 253177 . - . ID=gene-AD12_RS20965;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;locus_tag=AD12_RS20965;old_locus_tag=AD12_0248 NZ_JJLK01000041.1 Protein Homology CDS 252437 253177 . - 0 ID=cds-WP_000465930.1;Parent=gene-AD12_RS20965;Dbxref=GenBank:WP_000465930.1;Name=WP_000465930.1;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AD12_RS20965;product=fimbrial chaperone;protein_id=WP_000465930.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 253282 253866 . - . ID=gene-AD12_RS20960;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AD12_RS20960;old_locus_tag=AD12_0250 NZ_JJLK01000041.1 Protein Homology CDS 253282 253866 . - 0 ID=cds-WP_032286311.1;Parent=gene-AD12_RS20960;Dbxref=GenBank:WP_032286311.1;Name=WP_032286311.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AD12_RS20960;product=fimbrial protein;protein_id=WP_032286311.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 254236 254715 . - . ID=gene-AD12_RS20955;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AD12_RS20955;old_locus_tag=AD12_0251 NZ_JJLK01000041.1 Protein Homology CDS 254236 254715 . - 0 ID=cds-WP_000215124.1;Parent=gene-AD12_RS20955;Dbxref=GenBank:WP_000215124.1;Name=WP_000215124.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706090.1;locus_tag=AD12_RS20955;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215124.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 254712 256109 . - . ID=gene-AD12_RS20950;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AD12_RS20950;old_locus_tag=AD12_0252 NZ_JJLK01000041.1 Protein Homology CDS 254712 256109 . - 0 ID=cds-WP_203226324.1;Parent=gene-AD12_RS20950;Dbxref=GenBank:WP_203226324.1;Name=WP_203226324.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AD12_RS20950;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_203226324.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 256169 257065 . - . ID=gene-AD12_RS20945;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AD12_RS20945;old_locus_tag=AD12_0253 NZ_JJLK01000041.1 Protein Homology CDS 256169 257065 . - 0 ID=cds-WP_032286312.1;Parent=gene-AD12_RS20945;Dbxref=GenBank:WP_032286312.1;Name=WP_032286312.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AD12_RS20945;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_032286312.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 257132 257587 . - . ID=gene-AD12_RS20940;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AD12_RS20940;old_locus_tag=AD12_0254 NZ_JJLK01000041.1 Protein Homology CDS 257132 257587 . - 0 ID=cds-WP_001155227.1;Parent=gene-AD12_RS20940;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AD12_RS20940;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 257765 258469 . - . ID=gene-AD12_RS20935;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AD12_RS20935;old_locus_tag=AD12_0255 NZ_JJLK01000041.1 Protein Homology CDS 257765 258469 . - 0 ID=cds-WP_000396036.1;Parent=gene-AD12_RS20935;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AD12_RS20935;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 258484 259014 . - . ID=gene-AD12_RS20930;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AD12_RS20930;old_locus_tag=AD12_0256 NZ_JJLK01000041.1 Protein Homology CDS 258484 259014 . - 0 ID=cds-WP_001294700.1;Parent=gene-AD12_RS20930;Dbxref=GenBank:WP_001294700.1;Name=WP_001294700.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AD12_RS20930;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JJLK01000041.1 RefSeq gene 259088 261517 . + . ID=gene-AD12_RS20925;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AD12_RS20925;old_locus_tag=AD12_0257 NZ_JJLK01000041.1 Protein Homology CDS 259088 261517 . + 0 ID=cds-WP_001356280.1;Parent=gene-AD12_RS20925;Dbxref=GenBank:WP_001356280.1;Name=WP_001356280.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AD12_RS20925;product=ATP-dependent helicase HrpB;protein_id=WP_001356280.1;transl_table=11 ##sequence-region NZ_JJLK01000042.1 1 59144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000042.1 RefSeq region 1 59144 . + . ID=NZ_JJLK01000042.1:1..59144;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000042.1 RefSeq gene 184 2718 . + . ID=gene-AD12_RS20920;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AD12_RS20920;old_locus_tag=AD12_0258 NZ_JJLK01000042.1 Protein Homology CDS 184 2718 . + 0 ID=cds-WP_000918166.1;Parent=gene-AD12_RS20920;Dbxref=GenBank:WP_000918166.1;Name=WP_000918166.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=AD12_RS20920;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918166.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 2938 5127 . + . ID=gene-AD12_RS20915;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AD12_RS20915;old_locus_tag=AD12_0260 NZ_JJLK01000042.1 Protein Homology CDS 2938 5127 . + 0 ID=cds-WP_000124383.1;Parent=gene-AD12_RS20915;Dbxref=GenBank:WP_000124383.1;Name=WP_000124383.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=AD12_RS20915;product=ferrichrome porin FhuA;protein_id=WP_000124383.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 5178 5975 . + . ID=gene-AD12_RS20910;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AD12_RS20910;old_locus_tag=AD12_0261 NZ_JJLK01000042.1 Protein Homology CDS 5178 5975 . + 0 ID=cds-WP_001158933.1;Parent=gene-AD12_RS20910;Dbxref=GenBank:WP_001158933.1;Name=WP_001158933.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308182.1;locus_tag=AD12_RS20910;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158933.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 5975 6865 . + . ID=gene-AD12_RS20905;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AD12_RS20905;old_locus_tag=AD12_0262 NZ_JJLK01000042.1 Protein Homology CDS 5975 6865 . + 0 ID=cds-WP_000015998.1;Parent=gene-AD12_RS20905;Dbxref=GenBank:WP_000015998.1;Name=WP_000015998.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706100.2;locus_tag=AD12_RS20905;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_000015998.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 6862 8844 . + . ID=gene-AD12_RS20900;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AD12_RS20900;old_locus_tag=AD12_0263 NZ_JJLK01000042.1 Protein Homology CDS 6862 8844 . + 0 ID=cds-WP_000044061.1;Parent=gene-AD12_RS20900;Dbxref=GenBank:WP_000044061.1;Name=WP_000044061.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AD12_RS20900;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_000044061.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 8879 10159 . - . ID=gene-AD12_RS20895;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AD12_RS20895;old_locus_tag=AD12_0264 NZ_JJLK01000042.1 Protein Homology CDS 8879 10159 . - 0 ID=cds-WP_000045304.1;Parent=gene-AD12_RS20895;Dbxref=GenBank:WP_000045304.1;Name=WP_000045304.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AD12_RS20895;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045304.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 10325 10372 . + . ID=gene-AD12_RS29220;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AD12_RS29220 NZ_JJLK01000042.1 Protein Homology CDS 10325 10372 . + 0 ID=cds-WP_211180485.1;Parent=gene-AD12_RS29220;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AD12_RS29220;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 10384 11805 . + . ID=gene-AD12_RS20890;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AD12_RS20890;old_locus_tag=AD12_0265 NZ_JJLK01000042.1 Protein Homology CDS 10384 11805 . + 0 ID=cds-WP_000845394.1;Parent=gene-AD12_RS20890;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AD12_RS20890;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 11829 11894 . + . ID=gene-AD12_RS28505;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AD12_RS28505 NZ_JJLK01000042.1 Protein Homology CDS 11829 11894 . + 0 ID=cds-WP_120795373.1;Parent=gene-AD12_RS28505;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AD12_RS28505;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 11887 12231 . + . ID=gene-AD12_RS20885;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AD12_RS20885;old_locus_tag=AD12_0266 NZ_JJLK01000042.1 Protein Homology CDS 11887 12231 . + 0 ID=cds-WP_001295564.1;Parent=gene-AD12_RS20885;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AD12_RS20885;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 12278 12901 . - . ID=gene-AD12_RS20880;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AD12_RS20880;old_locus_tag=AD12_0267 NZ_JJLK01000042.1 Protein Homology CDS 12278 12901 . - 0 ID=cds-WP_000964221.1;Parent=gene-AD12_RS20880;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AD12_RS20880;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 12939 13739 . - . ID=gene-AD12_RS20875;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AD12_RS20875;old_locus_tag=AD12_0268 NZ_JJLK01000042.1 Protein Homology CDS 12939 13739 . - 0 ID=cds-WP_032286314.1;Parent=gene-AD12_RS20875;Dbxref=GenBank:WP_032286314.1;Name=WP_032286314.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AD12_RS20875;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_032286314.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 13732 14430 . - . ID=gene-AD12_RS20870;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AD12_RS20870;old_locus_tag=AD12_0269 NZ_JJLK01000042.1 Protein Homology CDS 13732 14430 . - 0 ID=cds-WP_000689833.1;Parent=gene-AD12_RS20870;Dbxref=GenBank:WP_000689833.1;Name=WP_000689833.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AD12_RS20870;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689833.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 14514 16031 . + . ID=gene-AD12_RS20865;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AD12_RS20865;old_locus_tag=AD12_0270 NZ_JJLK01000042.1 Protein Homology CDS 14514 16031 . + 0 ID=cds-WP_000057099.1;Parent=gene-AD12_RS20865;Dbxref=GenBank:WP_000057099.1;Name=WP_000057099.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AD12_RS20865;product=dGTPase;protein_id=WP_000057099.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 16161 17585 . + . ID=gene-AD12_RS20860;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AD12_RS20860;old_locus_tag=AD12_0271 NZ_JJLK01000042.1 Protein Homology CDS 16161 17585 . + 0 ID=cds-WP_000753945.1;Parent=gene-AD12_RS20860;Dbxref=GenBank:WP_000753945.1;Name=WP_000753945.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AD12_RS20860;product=serine endoprotease DegP;protein_id=WP_000753945.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 17740 18897 . + . ID=gene-AD12_RS20855;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AD12_RS20855;old_locus_tag=AD12_0272 NZ_JJLK01000042.1 Protein Homology CDS 17740 18897 . + 0 ID=cds-WP_000929439.1;Parent=gene-AD12_RS20855;Dbxref=GenBank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AD12_RS20855;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 18986 19372 . - . ID=gene-AD12_RS20850;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AD12_RS20850;old_locus_tag=AD12_0273 NZ_JJLK01000042.1 Protein Homology CDS 18986 19372 . - 0 ID=cds-WP_000272188.1;Parent=gene-AD12_RS20850;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AD12_RS20850;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 19687 20511 . - . ID=gene-AD12_RS20845;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AD12_RS20845;old_locus_tag=AD12_0274 NZ_JJLK01000042.1 Protein Homology CDS 19687 20511 . - 0 ID=cds-WP_001186650.1;Parent=gene-AD12_RS20845;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AD12_RS20845;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 20542 23214 . - . ID=gene-AD12_RS20840;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AD12_RS20840;old_locus_tag=AD12_0275 NZ_JJLK01000042.1 Protein Homology CDS 20542 23214 . - 0 ID=cds-WP_001094571.1;Parent=gene-AD12_RS20840;Dbxref=GenBank:WP_001094571.1;Name=WP_001094571.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308196.1;locus_tag=AD12_RS20840;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094571.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 23276 24070 . - . ID=gene-AD12_RS20835;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AD12_RS20835;old_locus_tag=AD12_0276 NZ_JJLK01000042.1 Protein Homology CDS 23276 24070 . - 0 ID=cds-WP_001018194.1;Parent=gene-AD12_RS20835;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AD12_RS20835;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 24438 25163 . + . ID=gene-AD12_RS20830;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AD12_RS20830;old_locus_tag=AD12_0277 NZ_JJLK01000042.1 Protein Homology CDS 24438 25163 . + 0 ID=cds-WP_000246884.1;Parent=gene-AD12_RS20830;Dbxref=GenBank:WP_000246884.1;Name=WP_000246884.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AD12_RS20830;product=30S ribosomal protein S2;protein_id=WP_000246884.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 25421 26272 . + . ID=gene-AD12_RS20825;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AD12_RS20825;old_locus_tag=AD12_0279 NZ_JJLK01000042.1 Protein Homology CDS 25421 26272 . + 0 ID=cds-WP_000818114.1;Parent=gene-AD12_RS20825;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AD12_RS20825;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 26419 27144 . + . ID=gene-AD12_RS20820;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AD12_RS20820;old_locus_tag=AD12_0280 NZ_JJLK01000042.1 Protein Homology CDS 26419 27144 . + 0 ID=cds-WP_000224573.1;Parent=gene-AD12_RS20820;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AD12_RS20820;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 27294 27851 . + . ID=gene-AD12_RS20815;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AD12_RS20815;old_locus_tag=AD12_0281 NZ_JJLK01000042.1 Protein Homology CDS 27294 27851 . + 0 ID=cds-WP_000622418.1;Parent=gene-AD12_RS20815;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AD12_RS20815;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 27943 29139 . + . ID=gene-AD12_RS20810;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AD12_RS20810;old_locus_tag=AD12_0282 NZ_JJLK01000042.1 Protein Homology CDS 27943 29139 . + 0 ID=cds-WP_000811917.1;Parent=gene-AD12_RS20810;Dbxref=GenBank:WP_000811917.1;Name=WP_000811917.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AD12_RS20810;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811917.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 29328 30086 . + . ID=gene-AD12_RS20805;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AD12_RS20805;old_locus_tag=AD12_0283 NZ_JJLK01000042.1 Protein Homology CDS 29328 30086 . + 0 ID=cds-WP_001295562.1;Parent=gene-AD12_RS20805;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AD12_RS20805;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 30099 30956 . + . ID=gene-AD12_RS20800;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AD12_RS20800;old_locus_tag=AD12_0285 NZ_JJLK01000042.1 Protein Homology CDS 30099 30956 . + 0 ID=cds-WP_000922446.1;Parent=gene-AD12_RS20800;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AD12_RS20800;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 30968 32320 . + . ID=gene-AD12_RS20795;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AD12_RS20795;old_locus_tag=AD12_0286 NZ_JJLK01000042.1 Protein Homology CDS 30968 32320 . + 0 ID=cds-WP_001295561.1;Parent=gene-AD12_RS20795;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AD12_RS20795;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 32350 34782 . + . ID=gene-AD12_RS20790;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AD12_RS20790;old_locus_tag=AD12_0287 NZ_JJLK01000042.1 Protein Homology CDS 32350 34782 . + 0 ID=cds-WP_001240896.1;Parent=gene-AD12_RS20790;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AD12_RS20790;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 34904 35389 . + . ID=gene-AD12_RS20785;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AD12_RS20785;old_locus_tag=AD12_0288 NZ_JJLK01000042.1 Protein Homology CDS 34904 35389 . + 0 ID=cds-WP_000758956.1;Parent=gene-AD12_RS20785;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AD12_RS20785;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 35393 36418 . + . ID=gene-AD12_RS20780;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AD12_RS20780;old_locus_tag=AD12_0289 NZ_JJLK01000042.1 Protein Homology CDS 35393 36418 . + 0 ID=cds-WP_001139279.1;Parent=gene-AD12_RS20780;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AD12_RS20780;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 36523 36978 . + . ID=gene-AD12_RS20775;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AD12_RS20775;old_locus_tag=AD12_0290 NZ_JJLK01000042.1 Protein Homology CDS 36523 36978 . + 0 ID=cds-WP_000210739.1;Parent=gene-AD12_RS20775;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AD12_RS20775;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 36982 37770 . + . ID=gene-AD12_RS20770;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AD12_RS20770;old_locus_tag=AD12_0291 NZ_JJLK01000042.1 Protein Homology CDS 36982 37770 . + 0 ID=cds-WP_000565966.1;Parent=gene-AD12_RS20770;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AD12_RS20770;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 37770 38918 . + . ID=gene-AD12_RS20765;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AD12_RS20765;old_locus_tag=AD12_0292 NZ_JJLK01000042.1 Protein Homology CDS 37770 38918 . + 0 ID=cds-WP_000166360.1;Parent=gene-AD12_RS20765;Dbxref=GenBank:WP_000166360.1;Name=WP_000166360.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AD12_RS20765;product=lipid-A-disaccharide synthase;protein_id=WP_000166360.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 38915 39511 . + . ID=gene-AD12_RS20760;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AD12_RS20760;old_locus_tag=AD12_0293 NZ_JJLK01000042.1 Protein Homology CDS 38915 39511 . + 0 ID=cds-WP_000569401.1;Parent=gene-AD12_RS20760;Dbxref=GenBank:WP_000569401.1;Name=WP_000569401.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308212.1;locus_tag=AD12_RS20760;product=ribonuclease HII;protein_id=WP_000569401.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 39546 43028 . + . ID=gene-AD12_RS20755;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AD12_RS20755;old_locus_tag=AD12_0294 NZ_JJLK01000042.1 Protein Homology CDS 39546 43028 . + 0 ID=cds-WP_001503839.1;Parent=gene-AD12_RS20755;Dbxref=GenBank:WP_001503839.1;Name=WP_001503839.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AD12_RS20755;product=DNA polymerase III subunit alpha;protein_id=WP_001503839.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 43041 44000 . + . ID=gene-AD12_RS20750;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AD12_RS20750;old_locus_tag=AD12_0295 NZ_JJLK01000042.1 Protein Homology CDS 43041 44000 . + 0 ID=cds-WP_000055741.1;Parent=gene-AD12_RS20750;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AD12_RS20750;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JJLK01000042.1 RefSeq pseudogene 44099 46239 . + . ID=gene-AD12_RS20745;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=pseudogene;locus_tag=AD12_RS20745;old_locus_tag=AD12_0297;pseudo=true NZ_JJLK01000042.1 Protein Homology CDS 44099 46239 . + 0 ID=cds-AD12_RS20745;Parent=gene-AD12_RS20745;Note=frameshifted;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AD12_RS20745;product=lysine decarboxylase LdcC;pseudo=true;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 46296 46685 . + . ID=gene-AD12_RS20740;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AD12_RS20740;old_locus_tag=AD12_0298 NZ_JJLK01000042.1 Protein Homology CDS 46296 46685 . + 0 ID=cds-WP_000901098.1;Parent=gene-AD12_RS20740;Dbxref=GenBank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AD12_RS20740;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 46750 48048 . + . ID=gene-AD12_RS20735;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AD12_RS20735;old_locus_tag=AD12_0299 NZ_JJLK01000042.1 Protein Homology CDS 46750 48048 . + 0 ID=cds-WP_000176526.1;Parent=gene-AD12_RS20735;Dbxref=GenBank:WP_000176526.1;Name=WP_000176526.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706133.1;locus_tag=AD12_RS20735;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000176526.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 48097 48357 . - . ID=gene-AD12_RS20730;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AD12_RS20730;old_locus_tag=AD12_0300 NZ_JJLK01000042.1 Protein Homology CDS 48097 48357 . - 0 ID=cds-WP_000062312.1;Parent=gene-AD12_RS20730;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AD12_RS20730;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 48344 48544 . - . ID=gene-AD12_RS20725;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AD12_RS20725;old_locus_tag=AD12_0301 NZ_JJLK01000042.1 Protein Homology CDS 48344 48544 . - 0 ID=cds-WP_000417058.1;Parent=gene-AD12_RS20725;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AD12_RS20725;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 48710 49255 . + . ID=gene-AD12_RS20720;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AD12_RS20720;old_locus_tag=AD12_0302 NZ_JJLK01000042.1 Protein Homology CDS 48710 49255 . + 0 ID=cds-WP_001185293.1;Parent=gene-AD12_RS20720;Dbxref=GenBank:WP_001185293.1;Name=WP_001185293.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AD12_RS20720;product=YaeQ family protein;protein_id=WP_001185293.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 49252 49674 . + . ID=gene-AD12_RS20715;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AD12_RS20715;old_locus_tag=AD12_0303 NZ_JJLK01000042.1 Protein Homology CDS 49252 49674 . + 0 ID=cds-WP_000635545.1;Parent=gene-AD12_RS20715;Dbxref=GenBank:WP_000635545.1;Name=WP_000635545.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AD12_RS20715;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635545.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 49688 50398 . + . ID=gene-AD12_RS20710;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AD12_RS20710;old_locus_tag=AD12_0304 NZ_JJLK01000042.1 Protein Homology CDS 49688 50398 . + 0 ID=cds-WP_032170560.1;Parent=gene-AD12_RS20710;Dbxref=GenBank:WP_032170560.1;Name=WP_032170560.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706138.1;locus_tag=AD12_RS20710;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_032170560.1;transl_table=11 NZ_JJLK01000042.1 RefSeq pseudogene 50553 51376 . - . ID=gene-AD12_RS20700;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=pseudogene;locus_tag=AD12_RS20700;old_locus_tag=AD12_0306;pseudo=true NZ_JJLK01000042.1 Protein Homology CDS 50553 51376 . - 0 ID=cds-AD12_RS20700;Parent=gene-AD12_RS20700;Note=frameshifted;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=AD12_RS20700;product=YaeF family permuted papain-like enzyme;pseudo=true;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 51429 53147 . - . ID=gene-AD12_RS20695;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AD12_RS20695;old_locus_tag=AD12_0307 NZ_JJLK01000042.1 Protein Homology CDS 51429 53147 . - 0 ID=cds-WP_001260716.1;Parent=gene-AD12_RS20695;Dbxref=GenBank:WP_001260716.1;Name=WP_001260716.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AD12_RS20695;product=proline--tRNA ligase;protein_id=WP_001260716.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 53259 53966 . - . ID=gene-AD12_RS20690;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AD12_RS20690;old_locus_tag=AD12_0308 NZ_JJLK01000042.1 Protein Homology CDS 53259 53966 . - 0 ID=cds-WP_000094011.1;Parent=gene-AD12_RS20690;Dbxref=GenBank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AD12_RS20690;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 53963 54367 . - . ID=gene-AD12_RS20685;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AD12_RS20685;old_locus_tag=AD12_0309 NZ_JJLK01000042.1 Protein Homology CDS 53963 54367 . - 0 ID=cds-WP_001202329.1;Parent=gene-AD12_RS20685;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AD12_RS20685;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 54485 55300 . - . ID=gene-AD12_RS20680;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AD12_RS20680;old_locus_tag=AD12_0310 NZ_JJLK01000042.1 Protein Homology CDS 54485 55300 . - 0 ID=cds-WP_000874224.1;Parent=gene-AD12_RS20680;Dbxref=GenBank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=AD12_RS20680;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 55340 55993 . - . ID=gene-AD12_RS20675;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AD12_RS20675;old_locus_tag=AD12_0311 NZ_JJLK01000042.1 Protein Homology CDS 55340 55993 . - 0 ID=cds-WP_001294600.1;Parent=gene-AD12_RS20675;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AD12_RS20675;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 55986 57017 . - . ID=gene-AD12_RS20670;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AD12_RS20670;old_locus_tag=AD12_0312 NZ_JJLK01000042.1 Protein Homology CDS 55986 57017 . - 0 ID=cds-WP_000593994.1;Parent=gene-AD12_RS20670;Dbxref=GenBank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AD12_RS20670;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 57205 57780 . + . ID=gene-AD12_RS20665;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AD12_RS20665;old_locus_tag=AD12_0313 NZ_JJLK01000042.1 Protein Homology CDS 57205 57780 . + 0 ID=cds-WP_001140187.1;Parent=gene-AD12_RS20665;Dbxref=GenBank:WP_001140187.1;Name=WP_001140187.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AD12_RS20665;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11 NZ_JJLK01000042.1 RefSeq gene 58144 59144 . + . ID=gene-AD12_RS20660;Name=AD12_RS20660;end_range=59144,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS20660;old_locus_tag=AD12_0314;partial=true NZ_JJLK01000042.1 cmsearch rRNA 58144 59144 . + . ID=rna-AD12_RS20660;Parent=gene-AD12_RS20660;Dbxref=RFAM:RF00177;end_range=59144,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS20660;partial=true;product=16S ribosomal RNA NZ_JJLK01000042.1 cmsearch exon 58144 59144 . + . ID=exon-AD12_RS20660-1;Parent=rna-AD12_RS20660;Dbxref=RFAM:RF00177;end_range=59144,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS20660;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLK01000043.1 1 457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000043.1 RefSeq region 1 457 . + . ID=NZ_JJLK01000043.1:1..457;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000043.1 RefSeq gene 204 457 . + . ID=gene-AD12_RS0123085;Name=AD12_RS0123085;end_range=457,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0123085;partial=true NZ_JJLK01000043.1 cmsearch rRNA 204 457 . + . ID=rna-AD12_RS0123085;Parent=gene-AD12_RS0123085;Dbxref=RFAM:RF02541;end_range=457,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0123085;partial=true;product=23S ribosomal RNA NZ_JJLK01000043.1 cmsearch exon 204 457 . + . ID=exon-AD12_RS0123085-1;Parent=rna-AD12_RS0123085;Dbxref=RFAM:RF02541;end_range=457,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0123085;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLK01000044.1 1 33328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000044.1 RefSeq region 1 33328 . + . ID=NZ_JJLK01000044.1:1..33328;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000044.1 RefSeq gene 108 223 . + . ID=gene-AD12_RS20655;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS20655;old_locus_tag=AD12_0315 NZ_JJLK01000044.1 cmsearch rRNA 108 223 . + . ID=rna-AD12_RS20655;Parent=gene-AD12_RS20655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS20655;product=5S ribosomal RNA NZ_JJLK01000044.1 cmsearch exon 108 223 . + . ID=exon-AD12_RS20655-1;Parent=rna-AD12_RS20655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS20655;product=5S ribosomal RNA NZ_JJLK01000044.1 RefSeq gene 278 354 . + . ID=gene-AD12_RS20650;Name=AD12_RS20650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS20650;old_locus_tag=AD12_0316 NZ_JJLK01000044.1 tRNAscan-SE tRNA 278 354 . + . ID=rna-AD12_RS20650;Parent=gene-AD12_RS20650;anticodon=(pos:312..314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20650;product=tRNA-Asp NZ_JJLK01000044.1 tRNAscan-SE exon 278 354 . + . ID=exon-AD12_RS20650-1;Parent=rna-AD12_RS20650;anticodon=(pos:312..314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20650;product=tRNA-Asp NZ_JJLK01000044.1 RefSeq gene 517 1320 . + . ID=gene-AD12_RS20645;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AD12_RS20645;old_locus_tag=AD12_0317 NZ_JJLK01000044.1 Protein Homology CDS 517 1320 . + 0 ID=cds-WP_000997010.1;Parent=gene-AD12_RS20645;Dbxref=GenBank:WP_000997010.1;Name=WP_000997010.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AD12_RS20645;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997010.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 1317 2231 . - . ID=gene-AD12_RS20640;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AD12_RS20640;old_locus_tag=AD12_0318 NZ_JJLK01000044.1 Protein Homology CDS 1317 2231 . - 0 ID=cds-WP_000648601.1;Parent=gene-AD12_RS20640;Dbxref=GenBank:WP_000648601.1;Name=WP_000648601.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AD12_RS20640;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648601.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 2472 3272 . + . ID=gene-AD12_RS20635;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AD12_RS20635;old_locus_tag=AD12_0319 NZ_JJLK01000044.1 Protein Homology CDS 2472 3272 . + 0 ID=cds-WP_001230983.1;Parent=gene-AD12_RS20635;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AD12_RS20635;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 3350 4120 . + . ID=gene-AD12_RS20630;Name=AD12_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20630;old_locus_tag=AD12_0320 NZ_JJLK01000044.1 Protein Homology CDS 3350 4120 . + 0 ID=cds-WP_000211685.1;Parent=gene-AD12_RS20630;Dbxref=GenBank:WP_000211685.1;Name=WP_000211685.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=AD12_RS20630;product=class I SAM-dependent methyltransferase;protein_id=WP_000211685.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 4168 5526 . - . ID=gene-AD12_RS20625;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AD12_RS20625;old_locus_tag=AD12_0321 NZ_JJLK01000044.1 Protein Homology CDS 4168 5526 . - 0 ID=cds-WP_032196939.1;Parent=gene-AD12_RS20625;Dbxref=GenBank:WP_032196939.1;Name=WP_032196939.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AD12_RS20625;product=murein transglycosylase D;protein_id=WP_032196939.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 5598 6353 . - . ID=gene-AD12_RS20620;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AD12_RS20620;old_locus_tag=AD12_0322 NZ_JJLK01000044.1 Protein Homology CDS 5598 6353 . - 0 ID=cds-WP_001052721.1;Parent=gene-AD12_RS20620;Dbxref=GenBank:WP_001052721.1;Name=WP_001052721.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AD12_RS20620;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052721.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 6387 7109 . + . ID=gene-AD12_RS20615;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AD12_RS20615;old_locus_tag=AD12_0323 NZ_JJLK01000044.1 Protein Homology CDS 6387 7109 . + 0 ID=cds-WP_001295200.1;Parent=gene-AD12_RS20615;Dbxref=GenBank:WP_001295200.1;Name=WP_001295200.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AD12_RS20615;product=class I SAM-dependent methyltransferase;protein_id=WP_001295200.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 7106 7573 . - . ID=gene-AD12_RS20610;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AD12_RS20610;old_locus_tag=AD12_0324 NZ_JJLK01000044.1 Protein Homology CDS 7106 7573 . - 0 ID=cds-WP_000917883.1;Parent=gene-AD12_RS20610;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AD12_RS20610;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 7638 8369 . + . ID=gene-AD12_RS20605;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AD12_RS20605;old_locus_tag=AD12_0325 NZ_JJLK01000044.1 Protein Homology CDS 7638 8369 . + 0 ID=cds-WP_001300756.1;Parent=gene-AD12_RS20605;Dbxref=GenBank:WP_001300756.1;Name=WP_001300756.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AD12_RS20605;product=DNA polymerase III subunit epsilon;protein_id=WP_001300756.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 8502 8578 . + . ID=gene-AD12_RS20600;Name=AD12_RS20600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS20600;old_locus_tag=AD12_0326 NZ_JJLK01000044.1 tRNAscan-SE tRNA 8502 8578 . + . ID=rna-AD12_RS20600;Parent=gene-AD12_RS20600;anticodon=(pos:8536..8538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20600;product=tRNA-Asp NZ_JJLK01000044.1 tRNAscan-SE exon 8502 8578 . + . ID=exon-AD12_RS20600-1;Parent=rna-AD12_RS20600;anticodon=(pos:8536..8538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20600;product=tRNA-Asp NZ_JJLK01000044.1 RefSeq gene 8906 9691 . + . ID=gene-AD12_RS20595;Name=yafT;gbkey=Gene;gene=yafT;gene_biotype=protein_coding;locus_tag=AD12_RS20595;old_locus_tag=AD12_0328 NZ_JJLK01000044.1 Protein Homology CDS 8906 9691 . + 0 ID=cds-WP_001086142.1;Parent=gene-AD12_RS20595;Dbxref=GenBank:WP_001086142.1;Name=WP_001086142.1;gbkey=CDS;gene=yafT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414752.1;locus_tag=AD12_RS20595;product=aminopeptidase;protein_id=WP_001086142.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 9828 10307 . - . ID=gene-AD12_RS0123090;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;locus_tag=AD12_RS0123090 NZ_JJLK01000044.1 Protein Homology CDS 9828 10307 . - 0 ID=cds-WP_001236652.1;Parent=gene-AD12_RS0123090;Dbxref=GenBank:WP_001236652.1;Name=WP_001236652.1;gbkey=CDS;gene=ykfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165307.1;locus_tag=AD12_RS0123090;product=protein YkfM;protein_id=WP_001236652.1;transl_table=11 NZ_JJLK01000044.1 RefSeq pseudogene 10317 11232 . - . ID=gene-AD12_RS0123095;Name=AD12_RS0123095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123095;pseudo=true NZ_JJLK01000044.1 Protein Homology CDS 10317 11232 . - 0 ID=cds-AD12_RS0123095;Parent=gene-AD12_RS0123095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908053.1;locus_tag=AD12_RS0123095;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 11276 11758 . - . ID=gene-AD12_RS20590;Name=AD12_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20590;old_locus_tag=AD12_0330 NZ_JJLK01000044.1 Protein Homology CDS 11276 11758 . - 0 ID=cds-WP_001284199.1;Parent=gene-AD12_RS20590;Dbxref=GenBank:WP_001284199.1;Name=WP_001284199.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284197.1;locus_tag=AD12_RS20590;product=Hcp family type VI secretion system effector;protein_id=WP_001284199.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 11782 13134 . - . ID=gene-AD12_RS20585;Name=AD12_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20585;old_locus_tag=AD12_0331 NZ_JJLK01000044.1 Protein Homology CDS 11782 13134 . - 0 ID=cds-WP_001087742.1;Parent=gene-AD12_RS20585;Dbxref=GenBank:WP_001087742.1;Name=WP_001087742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087757.1;locus_tag=AD12_RS20585;product=VasL domain-containing protein;protein_id=WP_001087742.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 13145 16579 . - . ID=gene-AD12_RS20580;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=AD12_RS20580;old_locus_tag=AD12_0332 NZ_JJLK01000044.1 Protein Homology CDS 13145 16579 . - 0 ID=cds-WP_148725070.1;Parent=gene-AD12_RS20580;Dbxref=GenBank:WP_148725070.1;Name=WP_148725070.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308245.2;locus_tag=AD12_RS20580;product=type VI secretion system membrane subunit TssM;protein_id=WP_148725070.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 16688 18100 . - . ID=gene-AD12_RS20575;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=AD12_RS20575;old_locus_tag=AD12_0333 NZ_JJLK01000044.1 Protein Homology CDS 16688 18100 . - 0 ID=cds-WP_001240524.1;Parent=gene-AD12_RS20575;Dbxref=GenBank:WP_001240524.1;Name=WP_001240524.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743361.1;locus_tag=AD12_RS20575;product=type VI secretion system protein TssA;protein_id=WP_001240524.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 18105 18848 . - . ID=gene-AD12_RS0123100;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=AD12_RS0123100 NZ_JJLK01000044.1 Protein Homology CDS 18105 18848 . - 0 ID=cds-WP_000088859.1;Parent=gene-AD12_RS0123100;Dbxref=GenBank:WP_000088859.1;Name=WP_000088859.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308249.1;locus_tag=AD12_RS0123100;product=type VI secretion system-associated protein VasI;protein_id=WP_000088859.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 18845 21610 . - . ID=gene-AD12_RS20570;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=AD12_RS20570;old_locus_tag=AD12_0335 NZ_JJLK01000044.1 Protein Homology CDS 18845 21610 . - 0 ID=cds-WP_000614400.1;Parent=gene-AD12_RS20570;Dbxref=GenBank:WP_000614400.1;Name=WP_000614400.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308250.1;locus_tag=AD12_RS20570;product=type VI secretion system ATPase TssH;protein_id=WP_000614400.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 21619 22380 . - . ID=gene-AD12_RS20565;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=AD12_RS20565;old_locus_tag=AD12_0336 NZ_JJLK01000044.1 Protein Homology CDS 21619 22380 . - 0 ID=cds-WP_032286317.1;Parent=gene-AD12_RS20565;Dbxref=GenBank:WP_032286317.1;Name=WP_032286317.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308251.1;locus_tag=AD12_RS20565;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_032286317.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 22385 23716 . - . ID=gene-AD12_RS20560;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AD12_RS20560;old_locus_tag=AD12_0337 NZ_JJLK01000044.1 Protein Homology CDS 22385 23716 . - 0 ID=cds-WP_000246444.1;Parent=gene-AD12_RS20560;Dbxref=GenBank:WP_000246444.1;Name=WP_000246444.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=AD12_RS20560;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000246444.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 23719 24243 . - . ID=gene-AD12_RS20555;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=AD12_RS20555;old_locus_tag=AD12_0338 NZ_JJLK01000044.1 Protein Homology CDS 23719 24243 . - 0 ID=cds-WP_001080149.1;Parent=gene-AD12_RS20555;Dbxref=GenBank:WP_001080149.1;Name=WP_001080149.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308253.1;locus_tag=AD12_RS20555;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001080149.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 24240 25490 . - . ID=gene-AD12_RS0123105;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=AD12_RS0123105;old_locus_tag=AD12_0339 NZ_JJLK01000044.1 Protein Homology CDS 24240 25490 . - 0 ID=cds-WP_050480825.1;Parent=gene-AD12_RS0123105;Dbxref=GenBank:WP_050480825.1;Name=WP_050480825.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=AD12_RS0123105;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_050480825.1;transl_table=11 NZ_JJLK01000044.1 RefSeq pseudogene 25545 26627 . - . ID=gene-AD12_RS26095;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=AD12_RS26095;pseudo=true NZ_JJLK01000044.1 Protein Homology CDS 25545 26627 . - 0 ID=cds-AD12_RS26095;Parent=gene-AD12_RS26095;Note=internal stop;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308255.1;locus_tag=AD12_RS26095;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 26591 28441 . - . ID=gene-AD12_RS20550;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AD12_RS20550;old_locus_tag=AD12_0342 NZ_JJLK01000044.1 Protein Homology CDS 26591 28441 . - 0 ID=cds-WP_000393844.1;Parent=gene-AD12_RS20550;Dbxref=GenBank:WP_000393844.1;Name=WP_000393844.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=AD12_RS20550;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000393844.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 28445 28858 . - . ID=gene-AD12_RS20545;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=AD12_RS20545;old_locus_tag=AD12_0343 NZ_JJLK01000044.1 Protein Homology CDS 28445 28858 . - 0 ID=cds-WP_000611742.1;Parent=gene-AD12_RS20545;Dbxref=GenBank:WP_000611742.1;Name=WP_000611742.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308257.1;locus_tag=AD12_RS20545;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000611742.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 28865 30340 . - . ID=gene-AD12_RS20540;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AD12_RS20540;old_locus_tag=AD12_0344 NZ_JJLK01000044.1 Protein Homology CDS 28865 30340 . - 0 ID=cds-WP_001398654.1;Parent=gene-AD12_RS20540;Dbxref=GenBank:WP_001398654.1;Name=WP_001398654.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501045.1;locus_tag=AD12_RS20540;product=type VI secretion system contractile sheath large subunit;protein_id=WP_001398654.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 30391 30615 . - . ID=gene-AD12_RS20535;Name=AD12_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20535;old_locus_tag=AD12_0345 NZ_JJLK01000044.1 Protein Homology CDS 30391 30615 . - 0 ID=cds-WP_000123970.1;Parent=gene-AD12_RS20535;Dbxref=GenBank:WP_000123970.1;Name=WP_000123970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308259.1;locus_tag=AD12_RS20535;product=hypothetical protein;protein_id=WP_000123970.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 30650 31150 . - . ID=gene-AD12_RS20530;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=AD12_RS20530;old_locus_tag=AD12_0346 NZ_JJLK01000044.1 Protein Homology CDS 30650 31150 . - 0 ID=cds-WP_000037395.1;Parent=gene-AD12_RS20530;Dbxref=GenBank:WP_000037395.1;Name=WP_000037395.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=AD12_RS20530;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000037395.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 31848 32366 . + . ID=gene-AD12_RS20520;Name=AD12_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20520;old_locus_tag=AD12_0348 NZ_JJLK01000044.1 Protein Homology CDS 31848 32366 . + 0 ID=cds-WP_001142958.1;Parent=gene-AD12_RS20520;Dbxref=GenBank:WP_001142958.1;Name=WP_001142958.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=AD12_RS20520;product=Hcp family type VI secretion system effector;protein_id=WP_001142958.1;transl_table=11 NZ_JJLK01000044.1 RefSeq gene 32576 33328 . + . ID=gene-AD12_RS20510;Name=tssI;end_range=33328,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AD12_RS20510;old_locus_tag=AD12_0350;partial=true NZ_JJLK01000044.1 Protein Homology CDS 32576 33328 . + 0 ID=cds-WP_032260805.1;Parent=gene-AD12_RS20510;Dbxref=GenBank:WP_032260805.1;Name=WP_032260805.1;Ontology_term=GO:0033103;end_range=33328,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AD12_RS20510;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032260805.1;transl_table=11 ##sequence-region NZ_JJLK01000045.1 1 3062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000045.1 RefSeq region 1 3062 . + . ID=NZ_JJLK01000045.1:1..3062;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000045.1 RefSeq pseudogene 1 190 . + . ID=gene-AD12_RS20505;Name=AD12_RS20505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20505;old_locus_tag=AD12_0351;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000045.1 Protein Homology CDS 1 190 . + 1 ID=cds-AD12_RS20505;Parent=gene-AD12_RS20505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS20505;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000045.1 RefSeq gene 220 633 . + . ID=gene-AD12_RS0123115;Name=AD12_RS0123115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123115 NZ_JJLK01000045.1 Protein Homology CDS 220 633 . + 0 ID=cds-WP_000960009.1;Parent=gene-AD12_RS0123115;Dbxref=GenBank:WP_000960009.1;Name=WP_000960009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774349.1;locus_tag=AD12_RS0123115;product=hypothetical protein;protein_id=WP_000960009.1;transl_table=11 NZ_JJLK01000045.1 RefSeq gene 871 1131 . + . ID=gene-AD12_RS0123120;Name=AD12_RS0123120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123120;old_locus_tag=AD12_0352 NZ_JJLK01000045.1 Protein Homology CDS 871 1131 . + 0 ID=cds-WP_155952865.1;Parent=gene-AD12_RS0123120;Dbxref=GenBank:WP_155952865.1;Name=WP_155952865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373303.1;locus_tag=AD12_RS0123120;product=DUF3969 family protein;protein_id=WP_155952865.1;transl_table=11 NZ_JJLK01000045.1 RefSeq gene 1212 3062 . + . ID=gene-AD12_RS20500;Name=AD12_RS20500;end_range=3062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20500;old_locus_tag=AD12_0353;partial=true NZ_JJLK01000045.1 Protein Homology CDS 1212 3062 . + 0 ID=cds-WP_032286319.1;Parent=gene-AD12_RS20500;Dbxref=GenBank:WP_032286319.1;Name=WP_032286319.1;end_range=3062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=AD12_RS20500;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032286319.1;transl_table=11 ##sequence-region NZ_JJLK01000046.1 1 8041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000046.1 RefSeq region 1 8041 . + . ID=NZ_JJLK01000046.1:1..8041;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000046.1 RefSeq gene 1 1495 . + . ID=gene-AD12_RS0123125;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AD12_RS0123125;old_locus_tag=AD12_0354;partial=true;start_range=.,1 NZ_JJLK01000046.1 Protein Homology CDS 1 1495 . + 1 ID=cds-WP_032286320.1;Parent=gene-AD12_RS0123125;Dbxref=GenBank:WP_032286320.1;Name=WP_032286320.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AD12_RS0123125;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032286320.1;start_range=.,1;transl_table=11 NZ_JJLK01000046.1 RefSeq gene 1563 5783 . + . ID=gene-AD12_RS20495;Name=AD12_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20495;old_locus_tag=AD12_0355 NZ_JJLK01000046.1 Protein Homology CDS 1563 5783 . + 0 ID=cds-WP_032286321.1;Parent=gene-AD12_RS20495;Dbxref=GenBank:WP_032286321.1;Name=WP_032286321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238907.1;locus_tag=AD12_RS20495;product=RHS element core protein;protein_id=WP_032286321.1;transl_table=11 NZ_JJLK01000046.1 RefSeq gene 5784 6182 . + . ID=gene-AD12_RS0123130;Name=AD12_RS0123130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123130 NZ_JJLK01000046.1 Protein Homology CDS 5784 6182 . + 0 ID=cds-WP_000425544.1;Parent=gene-AD12_RS0123130;Dbxref=GenBank:WP_000425544.1;Name=WP_000425544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425544.1;locus_tag=AD12_RS0123130;product=hypothetical protein;protein_id=WP_000425544.1;transl_table=11 NZ_JJLK01000046.1 RefSeq pseudogene 6225 6420 . + . ID=gene-AD12_RS29855;Name=AD12_RS29855;end_range=6420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29855;partial=true;pseudo=true;start_range=.,6225 NZ_JJLK01000046.1 Protein Homology CDS 6225 6420 . + 0 ID=cds-AD12_RS29855;Parent=gene-AD12_RS29855;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521871.1;locus_tag=AD12_RS29855;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,6225;transl_table=11 NZ_JJLK01000046.1 RefSeq gene 6729 6800 . + . ID=gene-AD12_RS28520;Name=AD12_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28520 NZ_JJLK01000046.1 Protein Homology CDS 6729 6800 . + 0 ID=cds-WP_231239850.1;Parent=gene-AD12_RS28520;Dbxref=GenBank:WP_231239850.1;Name=WP_231239850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026990.6;locus_tag=AD12_RS28520;product=hypothetical protein;protein_id=WP_231239850.1;transl_table=11 NZ_JJLK01000046.1 RefSeq gene 6827 7171 . + . ID=gene-AD12_RS20490;Name=AD12_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20490;old_locus_tag=AD12_0356 NZ_JJLK01000046.1 Protein Homology CDS 6827 7171 . + 0 ID=cds-WP_001279018.1;Parent=gene-AD12_RS20490;Dbxref=GenBank:WP_001279018.1;Name=WP_001279018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279013.1;locus_tag=AD12_RS20490;product=hypothetical protein;protein_id=WP_001279018.1;transl_table=11 NZ_JJLK01000046.1 RefSeq pseudogene 7575 8041 . + . ID=gene-AD12_RS20485;Name=AD12_RS20485;end_range=8041,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20485;old_locus_tag=AD12_0357;partial=true;pseudo=true NZ_JJLK01000046.1 Protein Homology CDS 7575 8041 . + 0 ID=cds-AD12_RS20485;Parent=gene-AD12_RS20485;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=8041,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS20485;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000047.1 1 2551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000047.1 RefSeq region 1 2551 . + . ID=NZ_JJLK01000047.1:1..2551;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000047.1 RefSeq gene 1 1625 . + . ID=gene-AD12_RS20480;Name=AD12_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20480;old_locus_tag=AD12_0359;partial=true;start_range=.,1 NZ_JJLK01000047.1 Protein Homology CDS 1 1625 . + 2 ID=cds-WP_032286322.1;Parent=gene-AD12_RS20480;Dbxref=GenBank:WP_032286322.1;Name=WP_032286322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763881.1;locus_tag=AD12_RS20480;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_032286322.1;start_range=.,1;transl_table=11 NZ_JJLK01000047.1 RefSeq gene 1603 1995 . + . ID=gene-AD12_RS0123135;Name=AD12_RS0123135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123135 NZ_JJLK01000047.1 Protein Homology CDS 1603 1995 . + 0 ID=cds-WP_001101832.1;Parent=gene-AD12_RS0123135;Dbxref=GenBank:WP_001101832.1;Name=WP_001101832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101839.1;locus_tag=AD12_RS0123135;product=hypothetical protein;protein_id=WP_001101832.1;transl_table=11 NZ_JJLK01000047.1 RefSeq gene 2445 2551 . + . ID=gene-AD12_RS28525;Name=AD12_RS28525;end_range=2551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28525;old_locus_tag=AD12_0361;partial=true NZ_JJLK01000047.1 Protein Homology CDS 2445 2551 . + 0 ID=cds-WP_148725071.1;Parent=gene-AD12_RS28525;Dbxref=GenBank:WP_148725071.1;Name=WP_148725071.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=2551,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS28525;partial=true;product=transposase family protein;protein_id=WP_148725071.1;transl_table=11 ##sequence-region NZ_JJLK01000048.1 1 39461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000048.1 RefSeq region 1 39461 . + . ID=NZ_JJLK01000048.1:1..39461;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000048.1 RefSeq gene 1 1029 . + . ID=gene-AD12_RS20475;Name=AD12_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20475;old_locus_tag=AD12_0362;partial=true;start_range=.,1 NZ_JJLK01000048.1 Protein Homology CDS 1 1029 . + 0 ID=cds-WP_050480827.1;Parent=gene-AD12_RS20475;Dbxref=GenBank:WP_050480827.1;Name=WP_050480827.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS20475;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_050480827.1;start_range=.,1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 1071 1841 . - . ID=gene-AD12_RS20470;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AD12_RS20470;old_locus_tag=AD12_0363 NZ_JJLK01000048.1 Protein Homology CDS 1071 1841 . - 0 ID=cds-WP_001118055.1;Parent=gene-AD12_RS20470;Dbxref=GenBank:WP_001118055.1;Name=WP_001118055.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308273.1;locus_tag=AD12_RS20470;product=2-oxoglutaramate amidase;protein_id=WP_001118055.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 2022 2468 . + . ID=gene-AD12_RS20465;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AD12_RS20465;old_locus_tag=AD12_0364 NZ_JJLK01000048.1 Protein Homology CDS 2022 2468 . + 0 ID=cds-WP_001308392.1;Parent=gene-AD12_RS20465;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AD12_RS20465;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 2511 4955 . - . ID=gene-AD12_RS20460;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AD12_RS20460;old_locus_tag=AD12_0365 NZ_JJLK01000048.1 Protein Homology CDS 2511 4955 . - 0 ID=cds-WP_000973093.1;Parent=gene-AD12_RS20460;Dbxref=GenBank:WP_000973093.1;Name=WP_000973093.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AD12_RS20460;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973093.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 5195 5773 . + . ID=gene-AD12_RS20455;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AD12_RS20455;old_locus_tag=AD12_0366 NZ_JJLK01000048.1 Protein Homology CDS 5195 5773 . + 0 ID=cds-WP_000284050.1;Parent=gene-AD12_RS20455;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AD12_RS20455;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 5979 6746 . + . ID=gene-AD12_RS20450;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AD12_RS20450;old_locus_tag=AD12_0367 NZ_JJLK01000048.1 Protein Homology CDS 5979 6746 . + 0 ID=cds-WP_000333380.1;Parent=gene-AD12_RS20450;Dbxref=GenBank:WP_000333380.1;Name=WP_000333380.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AD12_RS20450;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 6717 7457 . - . ID=gene-AD12_RS20445;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AD12_RS20445;old_locus_tag=AD12_0368 NZ_JJLK01000048.1 Protein Homology CDS 6717 7457 . - 0 ID=cds-WP_001225679.1;Parent=gene-AD12_RS20445;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AD12_RS20445;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 7749 8507 . + . ID=gene-AD12_RS20440;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AD12_RS20440;old_locus_tag=AD12_0369 NZ_JJLK01000048.1 Protein Homology CDS 7749 8507 . + 0 ID=cds-WP_000009291.1;Parent=gene-AD12_RS20440;Dbxref=GenBank:WP_000009291.1;Name=WP_000009291.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599877.1;locus_tag=AD12_RS20440;product=C40 family peptidase;protein_id=WP_000009291.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 8683 9180 . + . ID=gene-AD12_RS0123140;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AD12_RS0123140 NZ_JJLK01000048.1 Protein Homology CDS 8683 9180 . + 0 ID=cds-WP_000006256.1;Parent=gene-AD12_RS0123140;Dbxref=GenBank:WP_000006256.1;Name=WP_000006256.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AD12_RS0123140;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006256.1;transl_table=11 NZ_JJLK01000048.1 RefSeq pseudogene 9498 11216 . - . ID=gene-AD12_RS20435;Name=AD12_RS20435;end_range=11216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20435;old_locus_tag=AD12_0374;partial=true;pseudo=true NZ_JJLK01000048.1 Protein Homology CDS 9498 11216 . - 0 ID=cds-AD12_RS20435;Parent=gene-AD12_RS20435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0044780,GO:0071978;end_range=11216,.;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AD12_RS20435;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 11182 11967 . + . ID=gene-AD12_RS20430;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AD12_RS20430;old_locus_tag=AD12_0375 NZ_JJLK01000048.1 Protein Homology CDS 11182 11967 . + 0 ID=cds-WP_000207589.1;Parent=gene-AD12_RS20430;Dbxref=GenBank:WP_000207589.1;Name=WP_000207589.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706230.2;locus_tag=AD12_RS20430;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_000207589.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 12038 13093 . + . ID=gene-AD12_RS20425;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AD12_RS20425;old_locus_tag=AD12_0376 NZ_JJLK01000048.1 Protein Homology CDS 12038 13093 . + 0 ID=cds-WP_001226155.1;Parent=gene-AD12_RS20425;Dbxref=GenBank:WP_001226155.1;Name=WP_001226155.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AD12_RS20425;product=DNA polymerase IV;protein_id=WP_001226155.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 13090 13542 . + . ID=gene-AD12_RS20420;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AD12_RS20420;old_locus_tag=AD12_0377 NZ_JJLK01000048.1 Protein Homology CDS 13090 13542 . + 0 ID=cds-WP_001059874.1;Parent=gene-AD12_RS20420;Dbxref=GenBank:WP_001059874.1;Name=WP_001059874.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414769.1;locus_tag=AD12_RS20420;product=GNAT family N-acetyltransferase;protein_id=WP_001059874.1;transl_table=11 NZ_JJLK01000048.1 RefSeq pseudogene 13861 14067 . + . ID=gene-AD12_RS20415;Name=AD12_RS20415;end_range=14067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20415;old_locus_tag=AD12_0378;partial=true;pseudo=true NZ_JJLK01000048.1 Protein Homology CDS 13861 14067 . + 0 ID=cds-AD12_RS20415;Parent=gene-AD12_RS20415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AD12_RS20415;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JJLK01000048.1 RefSeq pseudogene 14006 14415 . + . ID=gene-AD12_RS29170;Name=AD12_RS29170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29170;pseudo=true NZ_JJLK01000048.1 Protein Homology CDS 14006 14415 . + 0 ID=cds-AD12_RS29170;Parent=gene-AD12_RS29170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AD12_RS29170;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 14472 15929 . - . ID=gene-AD12_RS20410;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AD12_RS20410;old_locus_tag=AD12_0381 NZ_JJLK01000048.1 Protein Homology CDS 14472 15929 . - 0 ID=cds-WP_001293003.1;Parent=gene-AD12_RS20410;Dbxref=GenBank:WP_001293003.1;Name=WP_001293003.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AD12_RS20410;product=cytosol nonspecific dipeptidase;protein_id=WP_001293003.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 16190 16648 . + . ID=gene-AD12_RS20405;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AD12_RS20405;old_locus_tag=AD12_0382 NZ_JJLK01000048.1 Protein Homology CDS 16190 16648 . + 0 ID=cds-WP_001291992.1;Parent=gene-AD12_RS20405;Dbxref=GenBank:WP_001291992.1;Name=WP_001291992.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AD12_RS20405;product=xanthine phosphoribosyltransferase;protein_id=WP_001291992.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 16740 17984 . + . ID=gene-AD12_RS20400;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AD12_RS20400;old_locus_tag=AD12_0383 NZ_JJLK01000048.1 Protein Homology CDS 16740 17984 . + 0 ID=cds-WP_000189539.1;Parent=gene-AD12_RS20400;Dbxref=GenBank:WP_000189539.1;Name=WP_000189539.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706239.1;locus_tag=AD12_RS20400;product=esterase FrsA;protein_id=WP_000189539.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 18042 18443 . + . ID=gene-AD12_RS0123150;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AD12_RS0123150;old_locus_tag=AD12_0384 NZ_JJLK01000048.1 Protein Homology CDS 18042 18443 . + 0 ID=cds-WP_000174677.1;Parent=gene-AD12_RS0123150;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AD12_RS0123150;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 18482 19537 . - . ID=gene-AD12_RS20395;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AD12_RS20395;old_locus_tag=AD12_0385 NZ_JJLK01000048.1 Protein Homology CDS 18482 19537 . - 0 ID=cds-WP_000749881.1;Parent=gene-AD12_RS20395;Dbxref=GenBank:WP_000749881.1;Name=WP_000749881.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=AD12_RS20395;product=phosphoporin PhoE;protein_id=WP_000749881.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 19825 20928 . + . ID=gene-AD12_RS20390;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AD12_RS20390;old_locus_tag=AD12_0386 NZ_JJLK01000048.1 Protein Homology CDS 19825 20928 . + 0 ID=cds-WP_001285288.1;Parent=gene-AD12_RS20390;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AD12_RS20390;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 20940 22193 . + . ID=gene-AD12_RS20385;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AD12_RS20385;old_locus_tag=AD12_0387 NZ_JJLK01000048.1 Protein Homology CDS 20940 22193 . + 0 ID=cds-WP_000893260.1;Parent=gene-AD12_RS20385;Dbxref=GenBank:WP_000893260.1;Name=WP_000893260.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AD12_RS20385;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893260.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 22308 22383 . + . ID=gene-AD12_RS20380;Name=AD12_RS20380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS20380;old_locus_tag=AD12_0388 NZ_JJLK01000048.1 tRNAscan-SE tRNA 22308 22383 . + . ID=rna-AD12_RS20380;Parent=gene-AD12_RS20380;anticodon=(pos:22341..22343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20380;product=tRNA-Thr NZ_JJLK01000048.1 tRNAscan-SE exon 22308 22383 . + . ID=exon-AD12_RS20380-1;Parent=rna-AD12_RS20380;anticodon=(pos:22341..22343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS20380;product=tRNA-Thr NZ_JJLK01000048.1 RefSeq gene 22398 23516 . - . ID=gene-AD12_RS20375;Name=AD12_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20375;old_locus_tag=AD12_0389 NZ_JJLK01000048.1 Protein Homology CDS 22398 23516 . - 0 ID=cds-WP_249403647.1;Parent=gene-AD12_RS20375;Dbxref=GenBank:WP_249403647.1;Name=WP_249403647.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706266.1;locus_tag=AD12_RS20375;product=tyrosine-type recombinase/integrase;protein_id=WP_249403647.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 23438 23788 . - . ID=gene-AD12_RS29420;Name=AD12_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29420 NZ_JJLK01000048.1 Protein Homology CDS 23438 23788 . - 0 ID=cds-WP_071784265.1;Parent=gene-AD12_RS29420;Dbxref=GenBank:WP_071784265.1;Name=WP_071784265.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443634.1;locus_tag=AD12_RS29420;product=helix-turn-helix domain-containing protein;protein_id=WP_071784265.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 23760 24038 . - . ID=gene-AD12_RS0123155;Name=AD12_RS0123155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123155 NZ_JJLK01000048.1 Protein Homology CDS 23760 24038 . - 0 ID=cds-WP_000488407.1;Parent=gene-AD12_RS0123155;Dbxref=GenBank:WP_000488407.1;Name=WP_000488407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248605.1;locus_tag=AD12_RS0123155;product=DUF4222 domain-containing protein;protein_id=WP_000488407.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 24086 24304 . - . ID=gene-AD12_RS0123160;Name=AD12_RS0123160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123160 NZ_JJLK01000048.1 Protein Homology CDS 24086 24304 . - 0 ID=cds-WP_032286324.1;Parent=gene-AD12_RS0123160;Dbxref=GenBank:WP_032286324.1;Name=WP_032286324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246897.1;locus_tag=AD12_RS0123160;product=TraR/DksA family transcriptional regulator;protein_id=WP_032286324.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 24403 24618 . - . ID=gene-AD12_RS20370;Name=AD12_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20370;old_locus_tag=AD12_0390 NZ_JJLK01000048.1 Protein Homology CDS 24403 24618 . - 0 ID=cds-WP_000188870.1;Parent=gene-AD12_RS20370;Dbxref=GenBank:WP_000188870.1;Name=WP_000188870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151206.1;locus_tag=AD12_RS20370;product=hypothetical protein;protein_id=WP_000188870.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 24695 24886 . - . ID=gene-AD12_RS0123170;Name=AD12_RS0123170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123170 NZ_JJLK01000048.1 Protein Homology CDS 24695 24886 . - 0 ID=cds-WP_016246896.1;Parent=gene-AD12_RS0123170;Dbxref=GenBank:WP_016246896.1;Name=WP_016246896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308834.1;locus_tag=AD12_RS0123170;product=DUF1382 family protein;protein_id=WP_016246896.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 24859 25041 . - . ID=gene-AD12_RS0123175;Name=AD12_RS0123175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123175 NZ_JJLK01000048.1 Protein Homology CDS 24859 25041 . - 0 ID=cds-WP_000682311.1;Parent=gene-AD12_RS0123175;Dbxref=GenBank:WP_000682311.1;Name=WP_000682311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309200.1;locus_tag=AD12_RS0123175;product=DUF1317 domain-containing protein;protein_id=WP_000682311.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 25038 25718 . - . ID=gene-AD12_RS20365;Name=AD12_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20365;old_locus_tag=AD12_0392 NZ_JJLK01000048.1 Protein Homology CDS 25038 25718 . - 0 ID=cds-WP_016246895.1;Parent=gene-AD12_RS20365;Dbxref=GenBank:WP_016246895.1;Name=WP_016246895.1;Ontology_term=GO:0004527,GO:0046872;gbkey=CDS;go_function=exonuclease activity|0004527||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308836.1;locus_tag=AD12_RS20365;product=lambda exonuclease family protein;protein_id=WP_016246895.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 25715 26500 . - . ID=gene-AD12_RS20360;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AD12_RS20360;old_locus_tag=AD12_0393 NZ_JJLK01000048.1 Protein Homology CDS 25715 26500 . - 0 ID=cds-WP_024220752.1;Parent=gene-AD12_RS20360;Dbxref=GenBank:WP_024220752.1;Name=WP_024220752.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311028.1;locus_tag=AD12_RS20360;product=phage recombination protein Bet;protein_id=WP_024220752.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 26506 26802 . - . ID=gene-AD12_RS20355;Name=AD12_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20355;old_locus_tag=AD12_0394 NZ_JJLK01000048.1 Protein Homology CDS 26506 26802 . - 0 ID=cds-WP_000995420.1;Parent=gene-AD12_RS20355;Dbxref=GenBank:WP_000995420.1;Name=WP_000995420.1;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AD12_RS20355;product=host-nuclease inhibitor Gam family protein;protein_id=WP_000995420.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 26879 27085 . - . ID=gene-AD12_RS0123180;Name=AD12_RS0123180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123180;old_locus_tag=AD12_0395 NZ_JJLK01000048.1 Protein Homology CDS 26879 27085 . - 0 ID=cds-WP_000233576.1;Parent=gene-AD12_RS0123180;Dbxref=GenBank:WP_000233576.1;Name=WP_000233576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524508.1;locus_tag=AD12_RS0123180;product=phage encoded cell division inhibitor protein;protein_id=WP_000233576.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 27564 28076 . - . ID=gene-AD12_RS20350;Name=AD12_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20350;old_locus_tag=AD12_0396 NZ_JJLK01000048.1 Protein Homology CDS 27564 28076 . - 0 ID=cds-WP_000581650.1;Parent=gene-AD12_RS20350;Dbxref=GenBank:WP_000581650.1;Name=WP_000581650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244337.1;locus_tag=AD12_RS20350;product=DUF4411 family protein;protein_id=WP_000581650.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 28073 29212 . - . ID=gene-AD12_RS20345;Name=AD12_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20345;old_locus_tag=AD12_0397 NZ_JJLK01000048.1 Protein Homology CDS 28073 29212 . - 0 ID=cds-WP_032286325.1;Parent=gene-AD12_RS20345;Dbxref=GenBank:WP_032286325.1;Name=WP_032286325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741702.1;locus_tag=AD12_RS20345;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_032286325.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 29342 30034 . - . ID=gene-AD12_RS0123185;Name=AD12_RS0123185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123185;old_locus_tag=AD12_0399 NZ_JJLK01000048.1 Protein Homology CDS 29342 30034 . - 0 ID=cds-WP_001295669.1;Parent=gene-AD12_RS0123185;Dbxref=GenBank:WP_001295669.1;Name=WP_001295669.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337214.1;locus_tag=AD12_RS0123185;product=XRE family transcriptional regulator;protein_id=WP_001295669.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 30145 30372 . + . ID=gene-AD12_RS0123190;Name=AD12_RS0123190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123190 NZ_JJLK01000048.1 Protein Homology CDS 30145 30372 . + 0 ID=cds-WP_000184665.1;Parent=gene-AD12_RS0123190;Dbxref=GenBank:WP_000184665.1;Name=WP_000184665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201115.1;locus_tag=AD12_RS0123190;product=helix-turn-helix domain-containing protein;protein_id=WP_000184665.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 30403 30942 . + . ID=gene-AD12_RS20340;Name=AD12_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20340;old_locus_tag=AD12_0400 NZ_JJLK01000048.1 Protein Homology CDS 30403 30942 . + 0 ID=cds-WP_001182890.1;Parent=gene-AD12_RS20340;Dbxref=GenBank:WP_001182890.1;Name=WP_001182890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182892.1;locus_tag=AD12_RS20340;product=toxin YdaT domain-containing protein;protein_id=WP_001182890.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 30939 31958 . + . ID=gene-AD12_RS20335;Name=AD12_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20335;old_locus_tag=AD12_0401 NZ_JJLK01000048.1 Protein Homology CDS 30939 31958 . + 0 ID=cds-WP_000147238.1;Parent=gene-AD12_RS20335;Dbxref=GenBank:WP_000147238.1;Name=WP_000147238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147908.1;locus_tag=AD12_RS20335;product=replication protein;protein_id=WP_000147238.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 31955 32656 . + . ID=gene-AD12_RS20330;Name=AD12_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20330;old_locus_tag=AD12_0402 NZ_JJLK01000048.1 Protein Homology CDS 31955 32656 . + 0 ID=cds-WP_001372464.1;Parent=gene-AD12_RS20330;Dbxref=GenBank:WP_001372464.1;Name=WP_001372464.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309639.1;locus_tag=AD12_RS20330;product=replication protein P;protein_id=WP_001372464.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 32653 32946 . + . ID=gene-AD12_RS0123195;Name=AD12_RS0123195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123195 NZ_JJLK01000048.1 Protein Homology CDS 32653 32946 . + 0 ID=cds-WP_000145917.1;Parent=gene-AD12_RS0123195;Dbxref=GenBank:WP_000145917.1;Name=WP_000145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735000.1;locus_tag=AD12_RS0123195;product=protein ren;protein_id=WP_000145917.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 33431 33991 . + . ID=gene-AD12_RS20325;Name=AD12_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20325;old_locus_tag=AD12_0404 NZ_JJLK01000048.1 Protein Homology CDS 33431 33991 . + 0 ID=cds-WP_000720581.1;Parent=gene-AD12_RS20325;Dbxref=GenBank:WP_000720581.1;Name=WP_000720581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720581.1;locus_tag=AD12_RS20325;product=hypothetical protein;protein_id=WP_000720581.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 33988 34440 . + . ID=gene-AD12_RS0123200;Name=AD12_RS0123200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123200 NZ_JJLK01000048.1 Protein Homology CDS 33988 34440 . + 0 ID=cds-WP_000825400.1;Parent=gene-AD12_RS0123200;Dbxref=GenBank:WP_000825400.1;Name=WP_000825400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825400.1;locus_tag=AD12_RS0123200;product=hypothetical protein;protein_id=WP_000825400.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 34533 34634 . + . ID=gene-AD12_RS27820;Name=AD12_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS27820 NZ_JJLK01000048.1 Protein Homology CDS 34533 34634 . + 0 ID=cds-WP_072157016.1;Parent=gene-AD12_RS27820;Dbxref=GenBank:WP_072157016.1;Name=WP_072157016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165308.1;locus_tag=AD12_RS27820;product=hypothetical protein;protein_id=WP_072157016.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 34631 35086 . + . ID=gene-AD12_RS20320;Name=ybcN;gbkey=Gene;gene=ybcN;gene_biotype=protein_coding;locus_tag=AD12_RS20320;old_locus_tag=AD12_0406 NZ_JJLK01000048.1 Protein Homology CDS 34631 35086 . + 0 ID=cds-WP_032286326.1;Parent=gene-AD12_RS20320;Dbxref=GenBank:WP_032286326.1;Name=WP_032286326.1;gbkey=CDS;gene=ybcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415079.1;locus_tag=AD12_RS20320;product=DNA base-flipping protein YbcN;protein_id=WP_032286326.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 35086 35256 . + . ID=gene-AD12_RS0123205;Name=ninE;gbkey=Gene;gene=ninE;gene_biotype=protein_coding;locus_tag=AD12_RS0123205 NZ_JJLK01000048.1 Protein Homology CDS 35086 35256 . + 0 ID=cds-WP_000224915.1;Parent=gene-AD12_RS0123205;Dbxref=GenBank:WP_000224915.1;Name=WP_000224915.1;gbkey=CDS;gene=ninE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415080.1;locus_tag=AD12_RS0123205;product=protein NinE from lambdoid prophage DLP12;protein_id=WP_000224915.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 35249 35539 . + . ID=gene-AD12_RS20315;Name=ybcO;gbkey=Gene;gene=ybcO;gene_biotype=protein_coding;locus_tag=AD12_RS20315;old_locus_tag=AD12_0407 NZ_JJLK01000048.1 Protein Homology CDS 35249 35539 . + 0 ID=cds-WP_000774476.1;Parent=gene-AD12_RS20315;Dbxref=GenBank:WP_000774476.1;Name=WP_000774476.1;gbkey=CDS;gene=ybcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309645.1;locus_tag=AD12_RS20315;product=DUF1364 domain-containing protein;protein_id=WP_000774476.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 35536 35898 . + . ID=gene-AD12_RS20310;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AD12_RS20310;old_locus_tag=AD12_0408 NZ_JJLK01000048.1 Protein Homology CDS 35536 35898 . + 0 ID=cds-WP_001099699.1;Parent=gene-AD12_RS20310;Dbxref=GenBank:WP_001099699.1;Name=WP_001099699.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415082.1;locus_tag=AD12_RS20310;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001099699.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 35895 36035 . + . ID=gene-AD12_RS20305;Name=ylcG;gbkey=Gene;gene=ylcG;gene_biotype=protein_coding;locus_tag=AD12_RS20305;old_locus_tag=AD12_0409 NZ_JJLK01000048.1 Protein Homology CDS 35895 36035 . + 0 ID=cds-WP_000971068.1;Parent=gene-AD12_RS20305;Dbxref=GenBank:WP_000971068.1;Name=WP_000971068.1;gbkey=CDS;gene=ylcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AD12_RS20305;product=YlcG family protein;protein_id=WP_000971068.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 36121 36504 . + . ID=gene-AD12_RS0123210;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;locus_tag=AD12_RS0123210 NZ_JJLK01000048.1 Protein Homology CDS 36121 36504 . + 0 ID=cds-WP_001204780.1;Parent=gene-AD12_RS0123210;Dbxref=GenBank:WP_001204780.1;Name=WP_001204780.1;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AD12_RS0123210;product=antitermination protein QuuD;protein_id=WP_001204780.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 36693 37775 . - . ID=gene-AD12_RS20300;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD12_RS20300;old_locus_tag=AD12_0413 NZ_JJLK01000048.1 Protein Homology CDS 36693 37775 . - 0 ID=cds-WP_000737275.1;Parent=gene-AD12_RS20300;Dbxref=GenBank:WP_000737275.1;Name=WP_000737275.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AD12_RS20300;product=porin OmpC;protein_id=WP_000737275.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 38363 38578 . + . ID=gene-AD12_RS20295;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AD12_RS20295;old_locus_tag=AD12_0414 NZ_JJLK01000048.1 Protein Homology CDS 38363 38578 . + 0 ID=cds-WP_000839596.1;Parent=gene-AD12_RS20295;Dbxref=GenBank:WP_000839596.1;Name=WP_000839596.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AD12_RS20295;product=phage lysis protein EssD;protein_id=WP_000839596.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 38578 39075 . + . ID=gene-AD12_RS20290;Name=rrrD;gbkey=Gene;gene=rrrD;gene_biotype=protein_coding;locus_tag=AD12_RS20290;old_locus_tag=AD12_0415 NZ_JJLK01000048.1 Protein Homology CDS 38578 39075 . + 0 ID=cds-WP_001135261.1;Parent=gene-AD12_RS20290;Dbxref=GenBank:WP_001135261.1;Name=WP_001135261.1;gbkey=CDS;gene=rrrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=AD12_RS20290;product=lysozyme RrrD;protein_id=WP_001135261.1;transl_table=11 NZ_JJLK01000048.1 RefSeq gene 39072 39461 . + . ID=gene-AD12_RS29425;Name=rzpD;end_range=39461,.;gbkey=Gene;gene=rzpD;gene_biotype=protein_coding;locus_tag=AD12_RS29425;old_locus_tag=AD12_0416;partial=true NZ_JJLK01000048.1 Protein Homology CDS 39072 39461 . + 0 ID=cds-WP_032286327.1;Parent=gene-AD12_RS29425;Dbxref=GenBank:WP_032286327.1;Name=WP_032286327.1;end_range=39461,.;gbkey=CDS;gene=rzpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309650.1;locus_tag=AD12_RS29425;partial=true;product=prophage endopeptidase RzpD;protein_id=WP_032286327.1;transl_table=11 ##sequence-region NZ_JJLK01000049.1 1 274453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000049.1 RefSeq region 1 274453 . + . ID=NZ_JJLK01000049.1:1..274453;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000049.1 RefSeq gene 1 527 . + . ID=gene-AD12_RS26135;Name=AD12_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26135;old_locus_tag=AD12_0417;partial=true;start_range=.,1 NZ_JJLK01000049.1 Protein Homology CDS 1 527 . + 2 ID=cds-WP_032286329.1;Parent=gene-AD12_RS26135;Dbxref=GenBank:WP_032286329.1;Name=WP_032286329.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421130.1;locus_tag=AD12_RS26135;partial=true;product=tail fiber assembly protein;protein_id=WP_032286329.1;start_range=.,1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 2033 2776 . + . ID=gene-AD12_RS20275;Name=AD12_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20275;old_locus_tag=AD12_0418 NZ_JJLK01000049.1 Protein Homology CDS 2033 2776 . + 0 ID=cds-WP_001468368.1;Parent=gene-AD12_RS20275;Dbxref=GenBank:WP_001468368.1;Name=WP_001468368.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308314.1;locus_tag=AD12_RS20275;product=AraC family transcriptional regulator;protein_id=WP_001468368.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 2818 3027 . - . ID=gene-AD12_RS20270;Name=AD12_RS20270;end_range=3027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20270;old_locus_tag=AD12_0419;partial=true;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 2818 3027 . - 0 ID=cds-AD12_RS20270;Parent=gene-AD12_RS20270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3027,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=AD12_RS20270;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 3438 3776 . - . ID=gene-AD12_RS20265;Name=AD12_RS20265;end_range=3776,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS20265;old_locus_tag=AD12_0421;partial=true;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 3438 3776 . - 0 ID=cds-AD12_RS20265;Parent=gene-AD12_RS20265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308332.2;locus_tag=AD12_RS20265;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 3827 4783 . - . ID=gene-AD12_RS20260;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=AD12_RS20260;old_locus_tag=AD12_0422 NZ_JJLK01000049.1 Protein Homology CDS 3827 4783 . - 0 ID=cds-WP_000121355.1;Parent=gene-AD12_RS20260;Dbxref=GenBank:WP_000121355.1;Name=WP_000121355.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=AD12_RS20260;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_000121355.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 4793 6991 . - . ID=gene-AD12_RS20255;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;locus_tag=AD12_RS20255;old_locus_tag=AD12_0423 NZ_JJLK01000049.1 Protein Homology CDS 4793 6991 . - 0 ID=cds-WP_000667031.1;Parent=gene-AD12_RS20255;Dbxref=GenBank:WP_000667031.1;Name=WP_000667031.1;gbkey=CDS;gene=paoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=AD12_RS20255;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_000667031.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 6988 7944 . - . ID=gene-AD12_RS20250;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;locus_tag=AD12_RS20250;old_locus_tag=AD12_0424 NZ_JJLK01000049.1 Protein Homology CDS 6988 7944 . - 0 ID=cds-WP_000643336.1;Parent=gene-AD12_RS20250;Dbxref=GenBank:WP_000643336.1;Name=WP_000643336.1;gbkey=CDS;gene=paoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=AD12_RS20250;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643336.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 7941 8630 . - . ID=gene-AD12_RS20245;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=AD12_RS20245;old_locus_tag=AD12_0425 NZ_JJLK01000049.1 Protein Homology CDS 7941 8630 . - 0 ID=cds-WP_000070694.1;Parent=gene-AD12_RS20245;Dbxref=GenBank:WP_000070694.1;Name=WP_000070694.1;Ontology_term=GO:0046872,GO:0047770,GO:0051536;gbkey=CDS;gene=paoA;go_function=metal ion binding|0046872||IEA,carboxylate reductase activity|0047770||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=AD12_RS20245;product=aldehyde dehydrogenase iron-sulfur subunit PaoA;protein_id=WP_000070694.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 9048 9662 . + . ID=gene-AD12_RS20240;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=protein_coding;locus_tag=AD12_RS20240;old_locus_tag=AD12_0427 NZ_JJLK01000049.1 Protein Homology CDS 9048 9662 . + 0 ID=cds-WP_001019920.1;Parent=gene-AD12_RS20240;Dbxref=GenBank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;gene=yagU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=AD12_RS20240;product=YagU family protein;protein_id=WP_001019920.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 9910 10239 . - . ID=gene-AD12_RS0123215;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;locus_tag=AD12_RS0123215 NZ_JJLK01000049.1 Protein Homology CDS 9910 10239 . - 0 ID=cds-WP_001303809.1;Parent=gene-AD12_RS0123215;Dbxref=GenBank:WP_001303809.1;Name=WP_001303809.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;gene=ykgJ;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=AD12_RS0123215;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 10552 11262 . - . ID=gene-AD12_RS20235;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;locus_tag=AD12_RS20235;old_locus_tag=AD12_0429 NZ_JJLK01000049.1 Protein Homology CDS 10552 11262 . - 0 ID=cds-WP_001305432.1;Parent=gene-AD12_RS20235;Dbxref=GenBank:WP_001305432.1;Name=WP_001305432.1;gbkey=CDS;gene=ecpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=AD12_RS20235;product=fimbrial chaperone EcpE;protein_id=WP_001305432.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 11231 12874 . - . ID=gene-AD12_RS20230;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=AD12_RS20230;old_locus_tag=AD12_0430 NZ_JJLK01000049.1 Protein Homology CDS 11231 12874 . - 0 ID=cds-WP_001323478.1;Parent=gene-AD12_RS20230;Dbxref=GenBank:WP_001323478.1;Name=WP_001323478.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=AD12_RS20230;product=fimbrial adhesin EcpD;protein_id=WP_001323478.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 12864 15389 . - . ID=gene-AD12_RS20225;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=yagX;locus_tag=AD12_RS20225;old_locus_tag=AD12_0431 NZ_JJLK01000049.1 Protein Homology CDS 12864 15389 . - 0 ID=cds-WP_032286330.1;Parent=gene-AD12_RS20225;Dbxref=GenBank:WP_032286330.1;Name=WP_032286330.1;gbkey=CDS;gene=ecpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=AD12_RS20225;product=fimbrial usher EcpC;protein_id=WP_032286330.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 15415 16083 . - . ID=gene-AD12_RS20220;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=yagY;locus_tag=AD12_RS20220;old_locus_tag=AD12_0432 NZ_JJLK01000049.1 Protein Homology CDS 15415 16083 . - 0 ID=cds-WP_000716398.1;Parent=gene-AD12_RS20220;Dbxref=GenBank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;gene=ecpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=AD12_RS20220;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 16141 16728 . - . ID=gene-AD12_RS20215;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=AD12_RS20215;old_locus_tag=AD12_0433 NZ_JJLK01000049.1 Protein Homology CDS 16141 16728 . - 0 ID=cds-WP_032286331.1;Parent=gene-AD12_RS20215;Dbxref=GenBank:WP_032286331.1;Name=WP_032286331.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=AD12_RS20215;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_032286331.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 16803 17345 . - . ID=gene-AD12_RS0123220;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AD12_RS0123220 NZ_JJLK01000049.1 Protein Homology CDS 16803 17345 . - 0 ID=cds-WP_001323479.1;Parent=gene-AD12_RS0123220;Dbxref=GenBank:WP_001323479.1;Name=WP_001323479.1;Ontology_term=GO:0006355,GO:1902021,GO:0003677;gbkey=CDS;gene=ecpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of bacterial-type flagellum-dependent cell motility|1902021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AD12_RS0123220;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001323479.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 18168 18395 . + . ID=gene-AD12_RS0123225;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=AD12_RS0123225 NZ_JJLK01000049.1 Protein Homology CDS 18168 18395 . + 0 ID=cds-WP_001147279.1;Parent=gene-AD12_RS0123225;Dbxref=GenBank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AD12_RS0123225;product=protein YkgL;protein_id=WP_001147279.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 18430 18570 . - . ID=gene-AD12_RS20210;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AD12_RS20210;old_locus_tag=AD12_0435 NZ_JJLK01000049.1 Protein Homology CDS 18430 18570 . - 0 ID=cds-WP_000866436.1;Parent=gene-AD12_RS20210;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AD12_RS20210;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 18570 18833 . - . ID=gene-AD12_RS20205;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=AD12_RS20205;old_locus_tag=AD12_0436 NZ_JJLK01000049.1 Protein Homology CDS 18570 18833 . - 0 ID=cds-WP_000803998.1;Parent=gene-AD12_RS20205;Dbxref=GenBank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AD12_RS20205;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 19197 19298 . - . ID=gene-AD12_RS29780;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AD12_RS29780 NZ_JJLK01000049.1 Protein Homology CDS 19197 19298 . - 0 ID=cds-WP_000662258.1;Parent=gene-AD12_RS29780;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AD12_RS29780;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 19772 19861 . - . ID=gene-AD12_RS29435;Name=AD12_RS29435;end_range=19861,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29435;partial=true;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 19772 19861 . - 0 ID=cds-AD12_RS29435;Parent=gene-AD12_RS29435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AD12_RS29435;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 20413 24668 . + . ID=gene-AD12_RS29440;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=pseudogene;locus_tag=AD12_RS29440;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 20413 24668 . + 0 ID=cds-AD12_RS29440;Parent=gene-AD12_RS29440;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AD12_RS29440;product=inverse autotransporter adhesin FdeC;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 24808 25659 . - . ID=gene-AD12_RS20200;Name=AD12_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS20200;old_locus_tag=AD12_0441 NZ_JJLK01000049.1 Protein Homology CDS 24808 25659 . - 0 ID=cds-WP_000621009.1;Parent=gene-AD12_RS20200;Dbxref=GenBank:WP_000621009.1;Name=WP_000621009.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AD12_RS20200;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 25962 26090 . + . ID=gene-AD12_RS28550;Name=AD12_RS28550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28550;partial=true;pseudo=true;start_range=.,25962 NZ_JJLK01000049.1 Protein Homology CDS 25962 26090 . + 0 ID=cds-AD12_RS28550;Parent=gene-AD12_RS28550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AD12_RS28550;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,25962;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 26250 26843 . - . ID=gene-AD12_RS20195;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AD12_RS20195;old_locus_tag=AD12_0442 NZ_JJLK01000049.1 Protein Homology CDS 26250 26843 . - 0 ID=cds-WP_001306921.1;Parent=gene-AD12_RS20195;Dbxref=GenBank:WP_001306921.1;Name=WP_001306921.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AD12_RS20195;product=reactive chlorine species resistance protein RclC;protein_id=WP_001306921.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 26855 27091 . - . ID=gene-AD12_RS20190;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AD12_RS20190;old_locus_tag=AD12_0443 NZ_JJLK01000049.1 Protein Homology CDS 26855 27091 . - 0 ID=cds-WP_000474091.1;Parent=gene-AD12_RS20190;Dbxref=GenBank:WP_000474091.1;Name=WP_000474091.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AD12_RS20190;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474091.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 27200 28525 . - . ID=gene-AD12_RS20185;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AD12_RS20185;old_locus_tag=AD12_0444 NZ_JJLK01000049.1 Protein Homology CDS 27200 28525 . - 0 ID=cds-WP_001046317.1;Parent=gene-AD12_RS20185;Dbxref=GenBank:WP_001046317.1;Name=WP_001046317.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308369.2;locus_tag=AD12_RS20185;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046317.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 28751 29605 . + . ID=gene-AD12_RS20180;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AD12_RS20180;old_locus_tag=AD12_0445 NZ_JJLK01000049.1 Protein Homology CDS 28751 29605 . + 0 ID=cds-WP_000339586.1;Parent=gene-AD12_RS20180;Dbxref=GenBank:WP_000339586.1;Name=WP_000339586.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308370.1;locus_tag=AD12_RS20180;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339586.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 30133 30852 . + . ID=gene-AD12_RS20175;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AD12_RS20175;old_locus_tag=AD12_0446 NZ_JJLK01000049.1 Protein Homology CDS 30133 30852 . + 0 ID=cds-WP_001102099.1;Parent=gene-AD12_RS20175;Dbxref=GenBank:WP_001102099.1;Name=WP_001102099.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AD12_RS20175;product=(Fe-S)-binding protein;protein_id=WP_001102099.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 30863 32290 . + . ID=gene-AD12_RS20170;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AD12_RS20170;old_locus_tag=AD12_0447 NZ_JJLK01000049.1 Protein Homology CDS 30863 32290 . + 0 ID=cds-WP_000023927.1;Parent=gene-AD12_RS20170;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AD12_RS20170;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 32283 32978 . + . ID=gene-AD12_RS20165;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AD12_RS20165;old_locus_tag=AD12_0448 NZ_JJLK01000049.1 Protein Homology CDS 32283 32978 . + 0 ID=cds-WP_001323770.1;Parent=gene-AD12_RS20165;Dbxref=GenBank:WP_001323770.1;Name=WP_001323770.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AD12_RS20165;product=LutC/YkgG family protein;protein_id=WP_001323770.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 33221 33889 . - . ID=gene-AD12_RS20160;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AD12_RS20160;old_locus_tag=AD12_0449 NZ_JJLK01000049.1 Protein Homology CDS 33221 33889 . - 0 ID=cds-WP_001209100.1;Parent=gene-AD12_RS20160;Dbxref=GenBank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AD12_RS20160;product=protein YkgH;protein_id=WP_001209100.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 34102 35772 . - . ID=gene-AD12_RS20155;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AD12_RS20155;old_locus_tag=AD12_0450 NZ_JJLK01000049.1 Protein Homology CDS 34102 35772 . - 0 ID=cds-WP_001159094.1;Parent=gene-AD12_RS20155;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AD12_RS20155;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 35786 37258 . - . ID=gene-AD12_RS20150;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AD12_RS20150;old_locus_tag=AD12_0451 NZ_JJLK01000049.1 Protein Homology CDS 35786 37258 . - 0 ID=cds-WP_000089055.1;Parent=gene-AD12_RS20150;Dbxref=GenBank:WP_000089055.1;Name=WP_000089055.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AD12_RS20150;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089055.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 37272 37859 . - . ID=gene-AD12_RS20145;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AD12_RS20145;old_locus_tag=AD12_0452 NZ_JJLK01000049.1 Protein Homology CDS 37272 37859 . - 0 ID=cds-WP_001299022.1;Parent=gene-AD12_RS20145;Dbxref=GenBank:WP_001299022.1;Name=WP_001299022.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308386.3;locus_tag=AD12_RS20145;product=transcriptional regulator BetI;protein_id=WP_001299022.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 37988 40021 . + . ID=gene-AD12_RS20140;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AD12_RS20140;old_locus_tag=AD12_0453 NZ_JJLK01000049.1 Protein Homology CDS 37988 40021 . + 0 ID=cds-WP_000131044.1;Parent=gene-AD12_RS20140;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AD12_RS20140;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 40327 40401 . + . ID=gene-AD12_RS28555;Name=AD12_RS28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28555 NZ_JJLK01000049.1 Protein Homology CDS 40327 40401 . + 0 ID=cds-WP_120795374.1;Parent=gene-AD12_RS28555;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AD12_RS28555;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 40896 41984 . + . ID=gene-AD12_RS0123250;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AD12_RS0123250;old_locus_tag=AD12_0454 NZ_JJLK01000049.1 Protein Homology CDS 40896 41984 . + 0 ID=cds-WP_001361002.1;Parent=gene-AD12_RS0123250;Dbxref=GenBank:WP_001361002.1;Name=WP_001361002.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AD12_RS0123250;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001361002.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 42026 42958 . - . ID=gene-AD12_RS20135;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AD12_RS20135;old_locus_tag=AD12_0455 NZ_JJLK01000049.1 Protein Homology CDS 42026 42958 . - 0 ID=cds-WP_032286332.1;Parent=gene-AD12_RS20135;Dbxref=GenBank:WP_032286332.1;Name=WP_032286332.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AD12_RS20135;product=LysR substrate-binding domain-containing protein;protein_id=WP_032286332.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 43050 43547 . - . ID=gene-AD12_RS20130;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=AD12_RS20130;old_locus_tag=AD12_0456 NZ_JJLK01000049.1 Protein Homology CDS 43050 43547 . - 0 ID=cds-WP_001013877.1;Parent=gene-AD12_RS20130;Dbxref=GenBank:WP_001013877.1;Name=WP_001013877.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yahC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AD12_RS20130;product=DUF1097 domain-containing protein;protein_id=WP_001013877.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 43805 44410 . + . ID=gene-AD12_RS20125;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AD12_RS20125;old_locus_tag=AD12_0457 NZ_JJLK01000049.1 Protein Homology CDS 43805 44410 . + 0 ID=cds-WP_000153100.1;Parent=gene-AD12_RS20125;Dbxref=GenBank:WP_000153100.1;Name=WP_000153100.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308394.1;locus_tag=AD12_RS20125;product=ankyrin repeat domain-containing protein;protein_id=WP_000153100.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 44450 45313 . + . ID=gene-AD12_RS20120;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AD12_RS20120;old_locus_tag=AD12_0458 NZ_JJLK01000049.1 Protein Homology CDS 44450 45313 . + 0 ID=cds-WP_001323764.1;Parent=gene-AD12_RS20120;Dbxref=GenBank:WP_001323764.1;Name=WP_001323764.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AD12_RS20120;product=DUF2877 domain-containing protein;protein_id=WP_001323764.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 45303 46850 . + . ID=gene-AD12_RS20115;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AD12_RS20115;old_locus_tag=AD12_0459 NZ_JJLK01000049.1 Protein Homology CDS 45303 46850 . + 0 ID=cds-WP_000111830.1;Parent=gene-AD12_RS20115;Dbxref=GenBank:WP_000111830.1;Name=WP_000111830.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AD12_RS20115;product=acyl-CoA synthetase FdrA;protein_id=WP_000111830.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 46850 48268 . + . ID=gene-AD12_RS20110;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AD12_RS20110;old_locus_tag=AD12_0460 NZ_JJLK01000049.1 Protein Homology CDS 46850 48268 . + 0 ID=cds-WP_000083455.1;Parent=gene-AD12_RS20110;Dbxref=GenBank:WP_000083455.1;Name=WP_000083455.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AD12_RS20110;product=DUF1116 domain-containing protein;protein_id=WP_000083455.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 48411 49361 . + . ID=gene-AD12_RS20105;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AD12_RS20105;old_locus_tag=AD12_0461 NZ_JJLK01000049.1 Protein Homology CDS 48411 49361 . + 0 ID=cds-WP_000661649.1;Parent=gene-AD12_RS20105;Dbxref=GenBank:WP_000661649.1;Name=WP_000661649.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AD12_RS20105;product=carbamate kinase family protein;protein_id=WP_000661649.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 49371 50753 . + . ID=gene-AD12_RS20100;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AD12_RS20100;old_locus_tag=AD12_0462 NZ_JJLK01000049.1 Protein Homology CDS 49371 50753 . + 0 ID=cds-WP_000665128.1;Parent=gene-AD12_RS20100;Dbxref=GenBank:WP_000665128.1;Name=WP_000665128.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AD12_RS20100;product=amidohydrolase family protein;protein_id=WP_000665128.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 50969 51043 . + . ID=gene-AD12_RS29445;Name=AD12_RS29445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29445;partial=true;pseudo=true;start_range=.,50969 NZ_JJLK01000049.1 Protein Homology CDS 50969 51043 . + 0 ID=cds-AD12_RS29445;Parent=gene-AD12_RS29445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AD12_RS29445;partial=true;product=hypothetical protein;pseudo=true;start_range=.,50969;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 51130 52179 . + . ID=gene-AD12_RS20095;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AD12_RS20095;old_locus_tag=AD12_0463 NZ_JJLK01000049.1 Protein Homology CDS 51130 52179 . + 0 ID=cds-WP_000692742.1;Parent=gene-AD12_RS20095;Dbxref=GenBank:WP_000692742.1;Name=WP_000692742.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308406.1;locus_tag=AD12_RS20095;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692742.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 52422 53237 . + . ID=gene-AD12_RS20090;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AD12_RS20090;old_locus_tag=AD12_0464 NZ_JJLK01000049.1 Protein Homology CDS 52422 53237 . + 0 ID=cds-WP_032286333.1;Parent=gene-AD12_RS20090;Dbxref=GenBank:WP_032286333.1;Name=WP_032286333.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308407.1;locus_tag=AD12_RS20090;product=protein YahL;protein_id=WP_032286333.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 53649 53894 . + . ID=gene-AD12_RS0123255;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AD12_RS0123255 NZ_JJLK01000049.1 Protein Homology CDS 53649 53894 . + 0 ID=cds-WP_000290614.1;Parent=gene-AD12_RS0123255;Dbxref=GenBank:WP_000290614.1;Name=WP_000290614.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AD12_RS0123255;product=protein YahM;protein_id=WP_000290614.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 53911 54582 . - . ID=gene-AD12_RS20085;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AD12_RS20085;old_locus_tag=AD12_0466 NZ_JJLK01000049.1 Protein Homology CDS 53911 54582 . - 0 ID=cds-WP_000976975.1;Parent=gene-AD12_RS20085;Dbxref=GenBank:WP_000976975.1;Name=WP_000976975.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AD12_RS20085;product=LysE family transporter;protein_id=WP_000976975.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 54729 55004 . + . ID=gene-AD12_RS20080;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AD12_RS20080;old_locus_tag=AD12_0467 NZ_JJLK01000049.1 Protein Homology CDS 54729 55004 . + 0 ID=cds-WP_000691956.1;Parent=gene-AD12_RS20080;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AD12_RS20080;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 55102 56688 . - . ID=gene-AD12_RS20075;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AD12_RS20075;old_locus_tag=AD12_0469 NZ_JJLK01000049.1 Protein Homology CDS 55102 56688 . - 0 ID=cds-WP_000941039.1;Parent=gene-AD12_RS20075;Dbxref=GenBank:WP_000941039.1;Name=WP_000941039.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AD12_RS20075;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941039.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 56926 57816 . + . ID=gene-AD12_RS20070;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AD12_RS20070;old_locus_tag=AD12_0470 NZ_JJLK01000049.1 Protein Homology CDS 56926 57816 . + 0 ID=cds-WP_000052202.1;Parent=gene-AD12_RS20070;Dbxref=GenBank:WP_000052202.1;Name=WP_000052202.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AD12_RS20070;product=methylisocitrate lyase;protein_id=WP_000052202.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 57861 59030 . + . ID=gene-AD12_RS20065;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AD12_RS20065;old_locus_tag=AD12_0471 NZ_JJLK01000049.1 Protein Homology CDS 57861 59030 . + 0 ID=cds-WP_001285909.1;Parent=gene-AD12_RS20065;Dbxref=GenBank:WP_001285909.1;Name=WP_001285909.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308413.1;locus_tag=AD12_RS20065;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285909.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 59064 60515 . + . ID=gene-AD12_RS20060;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AD12_RS20060;old_locus_tag=AD12_0472 NZ_JJLK01000049.1 Protein Homology CDS 59064 60515 . + 0 ID=cds-WP_001275861.1;Parent=gene-AD12_RS20060;Dbxref=GenBank:WP_001275861.1;Name=WP_001275861.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AD12_RS20060;product=2-methylcitrate dehydratase;protein_id=WP_001275861.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 60555 62441 . + . ID=gene-AD12_RS20055;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AD12_RS20055;old_locus_tag=AD12_0473 NZ_JJLK01000049.1 Protein Homology CDS 60555 62441 . + 0 ID=cds-WP_000010284.1;Parent=gene-AD12_RS20055;Dbxref=GenBank:WP_000010284.1;Name=WP_000010284.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=AD12_RS20055;product=propionate--CoA ligase;protein_id=WP_000010284.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 62773 64032 . + . ID=gene-AD12_RS20050;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AD12_RS20050;old_locus_tag=AD12_0474 NZ_JJLK01000049.1 Protein Homology CDS 62773 64032 . + 0 ID=cds-WP_000076236.1;Parent=gene-AD12_RS20050;Dbxref=GenBank:WP_000076236.1;Name=WP_000076236.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AD12_RS20050;product=cytosine permease;protein_id=WP_000076236.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 64022 65305 . + . ID=gene-AD12_RS20045;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AD12_RS20045;old_locus_tag=AD12_0475 NZ_JJLK01000049.1 Protein Homology CDS 64022 65305 . + 0 ID=cds-WP_032286334.1;Parent=gene-AD12_RS20045;Dbxref=GenBank:WP_032286334.1;Name=WP_032286334.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308417.1;locus_tag=AD12_RS20045;product=cytosine/isoguanine deaminase;protein_id=WP_032286334.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 65345 66244 . - . ID=gene-AD12_RS20040;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AD12_RS20040;old_locus_tag=AD12_0476 NZ_JJLK01000049.1 Protein Homology CDS 65345 66244 . - 0 ID=cds-WP_000952485.1;Parent=gene-AD12_RS20040;Dbxref=GenBank:WP_000952485.1;Name=WP_000952485.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AD12_RS20040;product=transcriptional regulator CynR;protein_id=WP_000952485.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 66354 67013 . + . ID=gene-AD12_RS20035;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AD12_RS20035;old_locus_tag=AD12_0477 NZ_JJLK01000049.1 Protein Homology CDS 66354 67013 . + 0 ID=cds-WP_000658652.1;Parent=gene-AD12_RS20035;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AD12_RS20035;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 67044 67514 . + . ID=gene-AD12_RS20030;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AD12_RS20030;old_locus_tag=AD12_0478 NZ_JJLK01000049.1 Protein Homology CDS 67044 67514 . + 0 ID=cds-WP_000616241.1;Parent=gene-AD12_RS20030;Dbxref=GenBank:WP_000616241.1;Name=WP_000616241.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308420.1;locus_tag=AD12_RS20030;product=cyanase;protein_id=WP_000616241.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 67520 68701 . + . ID=gene-AD12_RS20025;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AD12_RS20025;old_locus_tag=AD12_0479 NZ_JJLK01000049.1 Protein Homology CDS 67520 68701 . + 0 ID=cds-WP_032179803.1;Parent=gene-AD12_RS20025;Dbxref=GenBank:WP_032179803.1;Name=WP_032179803.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AD12_RS20025;product=cyanate transporter CynX;protein_id=WP_032179803.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 68804 69415 . - . ID=gene-AD12_RS20020;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AD12_RS20020;old_locus_tag=AD12_0480 NZ_JJLK01000049.1 Protein Homology CDS 68804 69415 . - 0 ID=cds-WP_001361018.1;Parent=gene-AD12_RS20020;Dbxref=GenBank:WP_001361018.1;Name=WP_001361018.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308422.1;locus_tag=AD12_RS20020;product=galactoside O-acetyltransferase;protein_id=WP_001361018.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 69481 70734 . - . ID=gene-AD12_RS20015;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AD12_RS20015;old_locus_tag=AD12_0481 NZ_JJLK01000049.1 Protein Homology CDS 69481 70734 . - 0 ID=cds-WP_000291557.1;Parent=gene-AD12_RS20015;Dbxref=GenBank:WP_000291557.1;Name=WP_000291557.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AD12_RS20015;product=lactose permease;protein_id=WP_000291557.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 70786 73860 . - . ID=gene-AD12_RS20010;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AD12_RS20010;old_locus_tag=AD12_0482 NZ_JJLK01000049.1 Protein Homology CDS 70786 73860 . - 0 ID=cds-WP_000177931.1;Parent=gene-AD12_RS20010;Dbxref=GenBank:WP_000177931.1;Name=WP_000177931.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AD12_RS20010;product=beta-galactosidase;protein_id=WP_000177931.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 73983 75065 . - . ID=gene-AD12_RS20005;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AD12_RS20005;old_locus_tag=AD12_0483 NZ_JJLK01000049.1 Protein Homology CDS 73983 75065 . - 0 ID=cds-WP_000805902.1;Parent=gene-AD12_RS20005;Dbxref=GenBank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AD12_RS20005;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 75142 75975 . - . ID=gene-AD12_RS20000;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AD12_RS20000;old_locus_tag=AD12_0484 NZ_JJLK01000049.1 Protein Homology CDS 75142 75975 . - 0 ID=cds-WP_001306931.1;Parent=gene-AD12_RS20000;Dbxref=GenBank:WP_001306931.1;Name=WP_001306931.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AD12_RS20000;product=DNA-binding transcriptional regulator;protein_id=WP_001306931.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 76166 77830 . + . ID=gene-AD12_RS19995;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AD12_RS19995;old_locus_tag=AD12_0485 NZ_JJLK01000049.1 Protein Homology CDS 76166 77830 . + 0 ID=cds-WP_001007454.1;Parent=gene-AD12_RS19995;Dbxref=GenBank:WP_001007454.1;Name=WP_001007454.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=AD12_RS19995;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007454.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 77832 78776 . + . ID=gene-AD12_RS19990;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AD12_RS19990;old_locus_tag=AD12_0486 NZ_JJLK01000049.1 Protein Homology CDS 77832 78776 . + 0 ID=cds-WP_001398695.1;Parent=gene-AD12_RS19990;Dbxref=GenBank:WP_001398695.1;Name=WP_001398695.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AD12_RS19990;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_001398695.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 78794 79660 . + . ID=gene-AD12_RS19985;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AD12_RS19985;old_locus_tag=AD12_0487 NZ_JJLK01000049.1 Protein Homology CDS 78794 79660 . + 0 ID=cds-WP_000121889.1;Parent=gene-AD12_RS19985;Dbxref=GenBank:WP_000121889.1;Name=WP_000121889.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AD12_RS19985;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121889.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 79670 80479 . + . ID=gene-AD12_RS19980;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AD12_RS19980;old_locus_tag=AD12_0488 NZ_JJLK01000049.1 Protein Homology CDS 79670 80479 . + 0 ID=cds-WP_000160734.1;Parent=gene-AD12_RS19980;Dbxref=GenBank:WP_000160734.1;Name=WP_000160734.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308432.2;locus_tag=AD12_RS19980;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160734.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 80476 81426 . + . ID=gene-AD12_RS19975;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AD12_RS19975;old_locus_tag=AD12_0489 NZ_JJLK01000049.1 Protein Homology CDS 80476 81426 . + 0 ID=cds-WP_000044302.1;Parent=gene-AD12_RS19975;Dbxref=GenBank:WP_000044302.1;Name=WP_000044302.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AD12_RS19975;product=acetaldehyde dehydrogenase;protein_id=WP_000044302.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 81423 82436 . + . ID=gene-AD12_RS19970;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AD12_RS19970;old_locus_tag=AD12_0490 NZ_JJLK01000049.1 Protein Homology CDS 81423 82436 . + 0 ID=cds-WP_001013499.1;Parent=gene-AD12_RS19970;Dbxref=GenBank:WP_001013499.1;Name=WP_001013499.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AD12_RS19970;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 82612 83823 . + . ID=gene-AD12_RS19965;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AD12_RS19965;old_locus_tag=AD12_0491 NZ_JJLK01000049.1 Protein Homology CDS 82612 83823 . + 0 ID=cds-WP_000107624.1;Parent=gene-AD12_RS19965;Dbxref=GenBank:WP_000107624.1;Name=WP_000107624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=AD12_RS19965;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_000107624.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 83925 84464 . + . ID=gene-AD12_RS19960;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AD12_RS19960;old_locus_tag=AD12_0492 NZ_JJLK01000049.1 Protein Homology CDS 83925 84464 . + 0 ID=cds-WP_001096705.1;Parent=gene-AD12_RS19960;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AD12_RS19960;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 84589 85422 . - . ID=gene-AD12_RS19955;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AD12_RS19955;old_locus_tag=AD12_0493 NZ_JJLK01000049.1 Protein Homology CDS 84589 85422 . - 0 ID=cds-WP_000419049.1;Parent=gene-AD12_RS19955;Dbxref=GenBank:WP_000419049.1;Name=WP_000419049.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AD12_RS19955;product=S-formylglutathione hydrolase;protein_id=WP_000419049.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 85515 86624 . - . ID=gene-AD12_RS19950;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AD12_RS19950;old_locus_tag=AD12_0494 NZ_JJLK01000049.1 Protein Homology CDS 85515 86624 . - 0 ID=cds-WP_000842102.1;Parent=gene-AD12_RS19950;Dbxref=GenBank:WP_000842102.1;Name=WP_000842102.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AD12_RS19950;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842102.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 86659 86934 . - . ID=gene-AD12_RS0123260;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AD12_RS0123260 NZ_JJLK01000049.1 Protein Homology CDS 86659 86934 . - 0 ID=cds-WP_001141271.1;Parent=gene-AD12_RS0123260;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AD12_RS0123260;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 87119 87893 . - . ID=gene-AD12_RS19945;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=pseudogene;locus_tag=AD12_RS19945;old_locus_tag=AD12_0496;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 87119 87893 . - 0 ID=cds-AD12_RS19945;Parent=gene-AD12_RS19945;Note=frameshifted;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AD12_RS19945;product=YaiO family outer membrane beta-barrel protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 87895 88476 . - . ID=gene-AD12_RS19940;Name=AD12_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19940;old_locus_tag=AD12_0497 NZ_JJLK01000049.1 Protein Homology CDS 87895 88476 . - 0 ID=cds-WP_024194469.1;Parent=gene-AD12_RS19940;Dbxref=GenBank:WP_024194469.1;Name=WP_024194469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308433.1;locus_tag=AD12_RS19940;product=acetyltransferase;protein_id=WP_024194469.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 88454 89650 . - . ID=gene-AD12_RS19935;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AD12_RS19935;old_locus_tag=AD12_0498 NZ_JJLK01000049.1 Protein Homology CDS 88454 89650 . - 0 ID=cds-WP_000860446.1;Parent=gene-AD12_RS19935;Dbxref=GenBank:WP_000860446.1;Name=WP_000860446.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AD12_RS19935;product=glycosyltransferase;protein_id=WP_000860446.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 89675 89794 . + . ID=gene-AD12_RS29860;Name=AD12_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29860 NZ_JJLK01000049.1 Protein Homology CDS 89675 89794 . + 0 ID=cds-WP_123059036.1;Parent=gene-AD12_RS29860;Dbxref=GenBank:WP_123059036.1;Name=WP_123059036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AD12_RS29860;product=hypothetical protein;protein_id=WP_123059036.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 89921 90331 . - . ID=gene-AD12_RS29865;Name=AD12_RS29865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29865;partial=true;pseudo=true;start_range=.,89921 NZ_JJLK01000049.1 Protein Homology CDS 89921 90331 . - 0 ID=cds-AD12_RS29865;Parent=gene-AD12_RS29865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AD12_RS29865;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,89921;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 90947 91909 . + . ID=gene-AD12_RS19925;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AD12_RS19925;old_locus_tag=AD12_0500 NZ_JJLK01000049.1 Protein Homology CDS 90947 91909 . + 0 ID=cds-WP_032286337.1;Parent=gene-AD12_RS19925;Dbxref=GenBank:WP_032286337.1;Name=WP_032286337.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AD12_RS19925;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032286337.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 91922 92689 . + . ID=gene-AD12_RS19920;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AD12_RS19920;old_locus_tag=AD12_0501 NZ_JJLK01000049.1 Protein Homology CDS 91922 92689 . + 0 ID=cds-WP_000939350.1;Parent=gene-AD12_RS19920;Dbxref=GenBank:WP_000939350.1;Name=WP_000939350.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414900.1;locus_tag=AD12_RS19920;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939350.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 92686 93513 . + . ID=gene-AD12_RS19915;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AD12_RS19915;old_locus_tag=AD12_0502 NZ_JJLK01000049.1 Protein Homology CDS 92686 93513 . + 0 ID=cds-WP_000114584.1;Parent=gene-AD12_RS19915;Dbxref=GenBank:WP_000114584.1;Name=WP_000114584.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=AD12_RS19915;product=taurine ABC transporter permease TauC;protein_id=WP_000114584.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 93510 94361 . + . ID=gene-AD12_RS19910;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AD12_RS19910;old_locus_tag=AD12_0503 NZ_JJLK01000049.1 Protein Homology CDS 93510 94361 . + 0 ID=cds-WP_000004024.1;Parent=gene-AD12_RS19910;Dbxref=GenBank:WP_000004024.1;Name=WP_000004024.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AD12_RS19910;product=taurine dioxygenase;protein_id=WP_000004024.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 94467 95441 . - . ID=gene-AD12_RS19905;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AD12_RS19905;old_locus_tag=AD12_0504 NZ_JJLK01000049.1 Protein Homology CDS 94467 95441 . - 0 ID=cds-WP_001295337.1;Parent=gene-AD12_RS19905;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AD12_RS19905;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 95965 98916 . + . ID=gene-AD12_RS19900;Name=AD12_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19900;old_locus_tag=AD12_0506 NZ_JJLK01000049.1 Protein Homology CDS 95965 98916 . + 0 ID=cds-WP_000556427.1;Parent=gene-AD12_RS19900;Dbxref=GenBank:WP_000556427.1;Name=WP_000556427.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399980.1;locus_tag=AD12_RS19900;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556427.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 99004 99627 . + . ID=gene-AD12_RS19895;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AD12_RS19895;old_locus_tag=AD12_0507 NZ_JJLK01000049.1 Protein Homology CDS 99004 99627 . + 0 ID=cds-WP_001295335.1;Parent=gene-AD12_RS19895;Dbxref=GenBank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AD12_RS19895;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295335.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 99628 100785 . - . ID=gene-AD12_RS19890;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AD12_RS19890;old_locus_tag=AD12_0508 NZ_JJLK01000049.1 Protein Homology CDS 99628 100785 . - 0 ID=cds-WP_000830742.1;Parent=gene-AD12_RS19890;Dbxref=GenBank:WP_000830742.1;Name=WP_000830742.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AD12_RS19890;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830742.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 101137 102357 . + . ID=gene-AD12_RS19880;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AD12_RS19880;old_locus_tag=AD12_0510 NZ_JJLK01000049.1 Protein Homology CDS 101137 102357 . + 0 ID=cds-WP_001301663.1;Parent=gene-AD12_RS19880;Dbxref=GenBank:WP_001301663.1;Name=WP_001301663.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308454.1;locus_tag=AD12_RS19880;product=peptide antibiotic transporter SbmA;protein_id=WP_001301663.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 102370 103464 . + . ID=gene-AD12_RS19875;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AD12_RS19875;old_locus_tag=AD12_0511 NZ_JJLK01000049.1 Protein Homology CDS 102370 103464 . + 0 ID=cds-WP_000092078.1;Parent=gene-AD12_RS19875;Dbxref=GenBank:WP_000092078.1;Name=WP_000092078.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414912.1;locus_tag=AD12_RS19875;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092078.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 103523 103831 . - . ID=gene-AD12_RS19870;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AD12_RS19870;old_locus_tag=AD12_0512 NZ_JJLK01000049.1 Protein Homology CDS 103523 103831 . - 0 ID=cds-WP_000763151.1;Parent=gene-AD12_RS19870;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AD12_RS19870;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 104091 104303 . + . ID=gene-AD12_RS28560;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AD12_RS28560;old_locus_tag=AD12_0513 NZ_JJLK01000049.1 Protein Homology CDS 104091 104303 . + 0 ID=cds-WP_001295334.1;Parent=gene-AD12_RS28560;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AD12_RS28560;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 104327 105421 . - . ID=gene-AD12_RS19860;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AD12_RS19860;old_locus_tag=AD12_0514 NZ_JJLK01000049.1 Protein Homology CDS 104327 105421 . - 0 ID=cds-WP_000413677.1;Parent=gene-AD12_RS19860;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AD12_RS19860;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 105499 105702 . + . ID=gene-AD12_RS29015;Name=AD12_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29015;old_locus_tag=AD12_0515 NZ_JJLK01000049.1 Protein Homology CDS 105499 105702 . + 0 ID=cds-WP_001300669.1;Parent=gene-AD12_RS29015;Dbxref=GenBank:WP_001300669.1;Name=WP_001300669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AD12_RS29015;product=hypothetical protein;protein_id=WP_001300669.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 105884 106144 . + . ID=gene-AD12_RS19850;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AD12_RS19850;old_locus_tag=AD12_0517 NZ_JJLK01000049.1 Protein Homology CDS 105884 106144 . + 0 ID=cds-WP_000792970.1;Parent=gene-AD12_RS19850;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AD12_RS19850;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 106245 107660 . + . ID=gene-AD12_RS19845;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AD12_RS19845;old_locus_tag=AD12_0518 NZ_JJLK01000049.1 Protein Homology CDS 106245 107660 . + 0 ID=cds-WP_001356231.1;Parent=gene-AD12_RS19845;Dbxref=GenBank:WP_001356231.1;Name=WP_001356231.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AD12_RS19845;product=alkaline phosphatase;protein_id=WP_001356231.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 107779 108099 . + . ID=gene-AD12_RS19840;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AD12_RS19840;old_locus_tag=AD12_0519 NZ_JJLK01000049.1 Protein Homology CDS 107779 108099 . + 0 ID=cds-WP_001295332.1;Parent=gene-AD12_RS19840;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AD12_RS19840;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 108201 109316 . + . ID=gene-AD12_RS19835;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AD12_RS19835;old_locus_tag=AD12_0520 NZ_JJLK01000049.1 Protein Homology CDS 108201 109316 . + 0 ID=cds-WP_000484048.1;Parent=gene-AD12_RS19835;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AD12_RS19835;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 109333 110142 . - . ID=gene-AD12_RS19830;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AD12_RS19830;old_locus_tag=AD12_0521 NZ_JJLK01000049.1 Protein Homology CDS 109333 110142 . - 0 ID=cds-WP_001295331.1;Parent=gene-AD12_RS19830;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AD12_RS19830;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 110262 110726 . + . ID=gene-AD12_RS19825;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AD12_RS19825;old_locus_tag=AD12_0522 NZ_JJLK01000049.1 Protein Homology CDS 110262 110726 . + 0 ID=cds-WP_032286338.1;Parent=gene-AD12_RS19825;Dbxref=GenBank:WP_032286338.1;Name=WP_032286338.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619195.1;locus_tag=AD12_RS19825;product=YaiI/YqxD family protein;protein_id=WP_032286338.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 110903 111427 . + . ID=gene-AD12_RS19820;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AD12_RS19820;old_locus_tag=AD12_0523 NZ_JJLK01000049.1 Protein Homology CDS 110903 111427 . + 0 ID=cds-WP_000193393.1;Parent=gene-AD12_RS19820;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AD12_RS19820;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 111477 111668 . + . ID=gene-AD12_RS0123270;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AD12_RS0123270;old_locus_tag=AD12_0524 NZ_JJLK01000049.1 Protein Homology CDS 111477 111668 . + 0 ID=cds-WP_001142439.1;Parent=gene-AD12_RS0123270;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AD12_RS0123270;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 111926 112603 . + . ID=gene-AD12_RS19815;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AD12_RS19815;old_locus_tag=AD12_0525 NZ_JJLK01000049.1 Protein Homology CDS 111926 112603 . + 0 ID=cds-WP_001276425.1;Parent=gene-AD12_RS19815;Dbxref=GenBank:WP_001276425.1;Name=WP_001276425.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AD12_RS19815;product=AroM family protein;protein_id=WP_001276425.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 112675 112959 . + . ID=gene-AD12_RS19810;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AD12_RS19810;old_locus_tag=AD12_0526 NZ_JJLK01000049.1 Protein Homology CDS 112675 112959 . + 0 ID=cds-WP_000941942.1;Parent=gene-AD12_RS19810;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AD12_RS19810;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 113114 113449 . + . ID=gene-AD12_RS0123280;Name=AD12_RS0123280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123280;partial=true;pseudo=true;start_range=.,113114 NZ_JJLK01000049.1 Protein Homology CDS 113114 113449 . + 0 ID=cds-AD12_RS0123280;Parent=gene-AD12_RS0123280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AD12_RS0123280;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,113114;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 113446 113529 . + . ID=gene-AD12_RS28565;Name=AD12_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28565 NZ_JJLK01000049.1 Protein Homology CDS 113446 113529 . + 0 ID=cds-WP_122633145.1;Parent=gene-AD12_RS28565;Dbxref=GenBank:WP_122633145.1;Name=WP_122633145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AD12_RS28565;product=hypothetical protein;protein_id=WP_122633145.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 113607 114518 . - . ID=gene-AD12_RS19805;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AD12_RS19805;old_locus_tag=AD12_0529 NZ_JJLK01000049.1 Protein Homology CDS 113607 114518 . - 0 ID=cds-WP_001298537.1;Parent=gene-AD12_RS19805;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AD12_RS19805;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 114643 115551 . + . ID=gene-AD12_RS19800;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AD12_RS19800;old_locus_tag=AD12_0530 NZ_JJLK01000049.1 Protein Homology CDS 114643 115551 . + 0 ID=cds-WP_001219312.1;Parent=gene-AD12_RS19800;Dbxref=GenBank:WP_001219312.1;Name=WP_001219312.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AD12_RS19800;product=fructokinase;protein_id=WP_001219312.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 115694 116878 . - . ID=gene-AD12_RS19795;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AD12_RS19795;old_locus_tag=AD12_0531 NZ_JJLK01000049.1 Protein Homology CDS 115694 116878 . - 0 ID=cds-WP_000755825.1;Parent=gene-AD12_RS19795;Dbxref=GenBank:WP_000755825.1;Name=WP_000755825.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AD12_RS19795;product=MFS transporter AraJ;protein_id=WP_000755825.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 117004 120147 . - . ID=gene-AD12_RS19790;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AD12_RS19790;old_locus_tag=AD12_0532 NZ_JJLK01000049.1 Protein Homology CDS 117004 120147 . - 0 ID=cds-WP_032286339.1;Parent=gene-AD12_RS19790;Dbxref=GenBank:WP_032286339.1;Name=WP_032286339.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706285.1;locus_tag=AD12_RS19790;product=exonuclease subunit SbcC;protein_id=WP_032286339.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 120144 121346 . - . ID=gene-AD12_RS19785;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AD12_RS19785;old_locus_tag=AD12_0533 NZ_JJLK01000049.1 Protein Homology CDS 120144 121346 . - 0 ID=cds-WP_001221319.1;Parent=gene-AD12_RS19785;Dbxref=GenBank:WP_001221319.1;Name=WP_001221319.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AD12_RS19785;product=exonuclease subunit SbcD;protein_id=WP_001221319.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 121536 122225 . + . ID=gene-AD12_RS19780;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AD12_RS19780;old_locus_tag=AD12_0534 NZ_JJLK01000049.1 Protein Homology CDS 121536 122225 . + 0 ID=cds-WP_032286340.1;Parent=gene-AD12_RS19780;Dbxref=GenBank:WP_032286340.1;Name=WP_032286340.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AD12_RS19780;product=phosphate response regulator transcription factor PhoB;protein_id=WP_032286340.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 122283 123578 . + . ID=gene-AD12_RS19775;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AD12_RS19775;old_locus_tag=AD12_0535 NZ_JJLK01000049.1 Protein Homology CDS 122283 123578 . + 0 ID=cds-WP_032170593.1;Parent=gene-AD12_RS19775;Dbxref=GenBank:WP_032170593.1;Name=WP_032170593.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706288.1;locus_tag=AD12_RS19775;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_032170593.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 123985 125304 . + . ID=gene-AD12_RS19770;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AD12_RS19770;old_locus_tag=AD12_0537 NZ_JJLK01000049.1 Protein Homology CDS 123985 125304 . + 0 ID=cds-WP_000149639.1;Parent=gene-AD12_RS19770;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AD12_RS19770;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 125380 126753 . + . ID=gene-AD12_RS19765;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AD12_RS19765;old_locus_tag=AD12_0538 NZ_JJLK01000049.1 Protein Homology CDS 125380 126753 . + 0 ID=cds-WP_001356230.1;Parent=gene-AD12_RS19765;Dbxref=GenBank:WP_001356230.1;Name=WP_001356230.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AD12_RS19765;product=proline-specific permease ProY;protein_id=WP_001356230.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 126909 128726 . + . ID=gene-AD12_RS19760;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AD12_RS19760;old_locus_tag=AD12_0539 NZ_JJLK01000049.1 Protein Homology CDS 126909 128726 . + 0 ID=cds-WP_001297133.1;Parent=gene-AD12_RS19760;Dbxref=GenBank:WP_001297133.1;Name=WP_001297133.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AD12_RS19760;product=maltodextrin glucosidase;protein_id=WP_001297133.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 128731 129312 . - . ID=gene-AD12_RS19755;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AD12_RS19755;old_locus_tag=AD12_0540 NZ_JJLK01000049.1 Protein Homology CDS 128731 129312 . - 0 ID=cds-WP_001009884.1;Parent=gene-AD12_RS19755;Dbxref=GenBank:WP_001009884.1;Name=WP_001009884.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AD12_RS19755;product=ACP phosphodiesterase;protein_id=WP_001009884.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 129405 130475 . + . ID=gene-AD12_RS19750;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AD12_RS19750;old_locus_tag=AD12_0541 NZ_JJLK01000049.1 Protein Homology CDS 129405 130475 . + 0 ID=cds-WP_001266503.1;Parent=gene-AD12_RS19750;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AD12_RS19750;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 130531 131658 . + . ID=gene-AD12_RS19745;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AD12_RS19745;old_locus_tag=AD12_0542 NZ_JJLK01000049.1 Protein Homology CDS 130531 131658 . + 0 ID=cds-WP_000667319.1;Parent=gene-AD12_RS19745;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AD12_RS19745;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 131681 132013 . + . ID=gene-AD12_RS19740;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AD12_RS19740;old_locus_tag=AD12_0543 NZ_JJLK01000049.1 Protein Homology CDS 131681 132013 . + 0 ID=cds-WP_000007629.1;Parent=gene-AD12_RS19740;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AD12_RS19740;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 132041 133888 . + . ID=gene-AD12_RS19735;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AD12_RS19735;old_locus_tag=AD12_0544 NZ_JJLK01000049.1 Protein Homology CDS 132041 133888 . + 0 ID=cds-WP_000934822.1;Parent=gene-AD12_RS19735;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AD12_RS19735;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 133899 134870 . + . ID=gene-AD12_RS19730;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AD12_RS19730;old_locus_tag=AD12_0545 NZ_JJLK01000049.1 Protein Homology CDS 133899 134870 . + 0 ID=cds-WP_000046637.1;Parent=gene-AD12_RS19730;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AD12_RS19730;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 134999 135346 . + . ID=gene-AD12_RS19725;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AD12_RS19725;old_locus_tag=AD12_0546 NZ_JJLK01000049.1 Protein Homology CDS 134999 135346 . + 0 ID=cds-WP_000974813.1;Parent=gene-AD12_RS19725;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AD12_RS19725;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 135523 136407 . - . ID=gene-AD12_RS19720;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AD12_RS19720;old_locus_tag=AD12_0547 NZ_JJLK01000049.1 Protein Homology CDS 135523 136407 . - 0 ID=cds-WP_001295328.1;Parent=gene-AD12_RS19720;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AD12_RS19720;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 136706 137245 . - . ID=gene-AD12_RS19715;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AD12_RS19715;old_locus_tag=AD12_0548 NZ_JJLK01000049.1 Protein Homology CDS 136706 137245 . - 0 ID=cds-WP_001295327.1;Parent=gene-AD12_RS19715;Dbxref=GenBank:WP_001295327.1;Name=WP_001295327.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AD12_RS19715;product=DUF3251 domain-containing protein;protein_id=WP_001295327.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 137396 137845 . + . ID=gene-AD12_RS19710;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AD12_RS19710;old_locus_tag=AD12_0549 NZ_JJLK01000049.1 Protein Homology CDS 137396 137845 . + 0 ID=cds-WP_000543535.1;Parent=gene-AD12_RS19710;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AD12_RS19710;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 137849 138952 . + . ID=gene-AD12_RS19705;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AD12_RS19705;old_locus_tag=AD12_0550 NZ_JJLK01000049.1 Protein Homology CDS 137849 138952 . + 0 ID=cds-WP_032286341.1;Parent=gene-AD12_RS19705;Dbxref=GenBank:WP_032286341.1;Name=WP_032286341.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706302.1;locus_tag=AD12_RS19705;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_032286341.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 139041 139511 . + . ID=gene-AD12_RS19700;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AD12_RS19700;old_locus_tag=AD12_0551 NZ_JJLK01000049.1 Protein Homology CDS 139041 139511 . + 0 ID=cds-WP_001021161.1;Parent=gene-AD12_RS19700;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AD12_RS19700;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 139531 139950 . + . ID=gene-AD12_RS19695;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AD12_RS19695;old_locus_tag=AD12_0552 NZ_JJLK01000049.1 Protein Homology CDS 139531 139950 . + 0 ID=cds-WP_000801125.1;Parent=gene-AD12_RS19695;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AD12_RS19695;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 140028 141005 . + . ID=gene-AD12_RS19690;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AD12_RS19690;old_locus_tag=AD12_0553 NZ_JJLK01000049.1 Protein Homology CDS 140028 141005 . + 0 ID=cds-WP_000742089.1;Parent=gene-AD12_RS19690;Dbxref=GenBank:WP_000742089.1;Name=WP_000742089.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AD12_RS19690;product=thiamine-phosphate kinase;protein_id=WP_000742089.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 140983 141501 . + . ID=gene-AD12_RS19685;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AD12_RS19685;old_locus_tag=AD12_0554 NZ_JJLK01000049.1 Protein Homology CDS 140983 141501 . + 0 ID=cds-WP_000154044.1;Parent=gene-AD12_RS19685;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AD12_RS19685;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 141555 142529 . - . ID=gene-AD12_RS19680;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AD12_RS19680;old_locus_tag=AD12_0555 NZ_JJLK01000049.1 Protein Homology CDS 141555 142529 . - 0 ID=cds-WP_001199783.1;Parent=gene-AD12_RS19680;Dbxref=GenBank:WP_001199783.1;Name=WP_001199783.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AD12_RS19680;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199783.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 142709 144571 . - . ID=gene-AD12_RS19675;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AD12_RS19675;old_locus_tag=AD12_0556 NZ_JJLK01000049.1 Protein Homology CDS 142709 144571 . - 0 ID=cds-WP_000006815.1;Parent=gene-AD12_RS19675;Dbxref=GenBank:WP_000006815.1;Name=WP_000006815.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AD12_RS19675;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006815.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 144596 145495 . - . ID=gene-AD12_RS19670;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AD12_RS19670;old_locus_tag=AD12_0557 NZ_JJLK01000049.1 Protein Homology CDS 144596 145495 . - 0 ID=cds-WP_000347235.1;Parent=gene-AD12_RS19670;Dbxref=GenBank:WP_000347235.1;Name=WP_000347235.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AD12_RS19670;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347235.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 145495 145737 . - . ID=gene-AD12_RS19665;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AD12_RS19665;old_locus_tag=AD12_0558 NZ_JJLK01000049.1 Protein Homology CDS 145495 145737 . - 0 ID=cds-WP_001124935.1;Parent=gene-AD12_RS19665;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AD12_RS19665;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 145943 147391 . + . ID=gene-AD12_RS19660;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AD12_RS19660;old_locus_tag=AD12_0559 NZ_JJLK01000049.1 Protein Homology CDS 145943 147391 . + 0 ID=cds-WP_000668685.1;Parent=gene-AD12_RS19660;Dbxref=GenBank:WP_000668685.1;Name=WP_000668685.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AD12_RS19660;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668685.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 147445 148035 . - . ID=gene-AD12_RS19655;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AD12_RS19655;old_locus_tag=AD12_0560 NZ_JJLK01000049.1 Protein Homology CDS 147445 148035 . - 0 ID=cds-WP_001276309.1;Parent=gene-AD12_RS19655;Dbxref=GenBank:WP_001276309.1;Name=WP_001276309.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308505.2;locus_tag=AD12_RS19655;product=protein deglycase YajL;protein_id=WP_001276309.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 147998 148909 . - . ID=gene-AD12_RS19650;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AD12_RS19650;old_locus_tag=AD12_0561 NZ_JJLK01000049.1 Protein Homology CDS 147998 148909 . - 0 ID=cds-WP_000705853.1;Parent=gene-AD12_RS19650;Dbxref=GenBank:WP_000705853.1;Name=WP_000705853.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AD12_RS19650;product=2-dehydropantoate 2-reductase;protein_id=WP_000705853.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 149077 149568 . + . ID=gene-AD12_RS19645;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AD12_RS19645;old_locus_tag=AD12_0562 NZ_JJLK01000049.1 Protein Homology CDS 149077 149568 . + 0 ID=cds-WP_001138904.1;Parent=gene-AD12_RS19645;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AD12_RS19645;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 149696 151060 . - . ID=gene-AD12_RS19640;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AD12_RS19640;old_locus_tag=AD12_0563 NZ_JJLK01000049.1 Protein Homology CDS 149696 151060 . - 0 ID=cds-WP_001000978.1;Parent=gene-AD12_RS19640;Dbxref=GenBank:WP_001000978.1;Name=WP_001000978.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=AD12_RS19640;product=MFS transporter;protein_id=WP_001000978.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 151209 152099 . - . ID=gene-AD12_RS19635;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AD12_RS19635;old_locus_tag=AD12_0564 NZ_JJLK01000049.1 Protein Homology CDS 151209 152099 . - 0 ID=cds-WP_000971327.1;Parent=gene-AD12_RS19635;Dbxref=GenBank:WP_000971327.1;Name=WP_000971327.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AD12_RS19635;product=heme o synthase;protein_id=WP_000971327.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 152111 152440 . - . ID=gene-AD12_RS19630;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AD12_RS19630;old_locus_tag=AD12_0565 NZ_JJLK01000049.1 Protein Homology CDS 152111 152440 . - 0 ID=cds-WP_000019869.1;Parent=gene-AD12_RS19630;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AD12_RS19630;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 152440 153054 . - . ID=gene-AD12_RS19625;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AD12_RS19625;old_locus_tag=AD12_0566 NZ_JJLK01000049.1 Protein Homology CDS 152440 153054 . - 0 ID=cds-WP_000179819.1;Parent=gene-AD12_RS19625;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AD12_RS19625;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 153044 155035 . - . ID=gene-AD12_RS19620;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AD12_RS19620;old_locus_tag=AD12_0567 NZ_JJLK01000049.1 Protein Homology CDS 153044 155035 . - 0 ID=cds-WP_000467180.1;Parent=gene-AD12_RS19620;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AD12_RS19620;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 155057 156004 . - . ID=gene-AD12_RS19615;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AD12_RS19615;old_locus_tag=AD12_0568 NZ_JJLK01000049.1 Protein Homology CDS 155057 156004 . - 0 ID=cds-WP_001239434.1;Parent=gene-AD12_RS19615;Dbxref=GenBank:WP_001239434.1;Name=WP_001239434.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AD12_RS19615;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239434.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 156464 157939 . - . ID=gene-AD12_RS19610;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AD12_RS19610;old_locus_tag=AD12_0569 NZ_JJLK01000049.1 Protein Homology CDS 156464 157939 . - 0 ID=cds-WP_000098438.1;Parent=gene-AD12_RS19610;Dbxref=GenBank:WP_000098438.1;Name=WP_000098438.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706326.1;locus_tag=AD12_RS19610;product=muropeptide MFS transporter AmpG;protein_id=WP_000098438.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 157983 158561 . - . ID=gene-AD12_RS19605;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AD12_RS19605;old_locus_tag=AD12_0570 NZ_JJLK01000049.1 Protein Homology CDS 157983 158561 . - 0 ID=cds-WP_001295326.1;Parent=gene-AD12_RS19605;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AD12_RS19605;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 158866 159183 . + . ID=gene-AD12_RS0123290;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AD12_RS0123290 NZ_JJLK01000049.1 Protein Homology CDS 158866 159183 . + 0 ID=cds-WP_000973448.1;Parent=gene-AD12_RS0123290;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AD12_RS0123290;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 159527 160825 . + . ID=gene-AD12_RS19595;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AD12_RS19595;old_locus_tag=AD12_0573 NZ_JJLK01000049.1 Protein Homology CDS 159527 160825 . + 0 ID=cds-WP_001198386.1;Parent=gene-AD12_RS19595;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AD12_RS19595;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 161071 161694 . + . ID=gene-AD12_RS19590;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AD12_RS19590;old_locus_tag=AD12_0574 NZ_JJLK01000049.1 Protein Homology CDS 161071 161694 . + 0 ID=cds-WP_000122253.1;Parent=gene-AD12_RS19590;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AD12_RS19590;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 161820 163094 . + . ID=gene-AD12_RS19585;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AD12_RS19585;old_locus_tag=AD12_0575 NZ_JJLK01000049.1 Protein Homology CDS 161820 163094 . + 0 ID=cds-WP_000130305.1;Parent=gene-AD12_RS19585;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AD12_RS19585;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 163282 165636 . + . ID=gene-AD12_RS19580;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AD12_RS19580;old_locus_tag=AD12_0576 NZ_JJLK01000049.1 Protein Homology CDS 163282 165636 . + 0 ID=cds-WP_001295325.1;Parent=gene-AD12_RS19580;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AD12_RS19580;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 165827 166117 . + . ID=gene-AD12_RS19575;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AD12_RS19575;old_locus_tag=AD12_0577 NZ_JJLK01000049.1 Protein Homology CDS 165827 166117 . + 0 ID=cds-WP_254892905.1;Parent=gene-AD12_RS19575;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AD12_RS19575;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 166309 168180 . + . ID=gene-AD12_RS19570;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AD12_RS19570;old_locus_tag=AD12_0578 NZ_JJLK01000049.1 Protein Homology CDS 166309 168180 . + 0 ID=cds-WP_000969380.1;Parent=gene-AD12_RS19570;Dbxref=GenBank:WP_000969380.1;Name=WP_000969380.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AD12_RS19570;product=peptidylprolyl isomerase;protein_id=WP_000969380.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 168331 168702 . + . ID=gene-AD12_RS19565;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AD12_RS19565;old_locus_tag=AD12_0579 NZ_JJLK01000049.1 Protein Homology CDS 168331 168702 . + 0 ID=cds-WP_000680294.1;Parent=gene-AD12_RS19565;Dbxref=GenBank:WP_000680294.1;Name=WP_000680294.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AD12_RS19565;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680294.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 168796 169194 . + . ID=gene-AD12_RS19560;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AD12_RS19560;old_locus_tag=AD12_0580 NZ_JJLK01000049.1 Protein Homology CDS 168796 169194 . + 0 ID=cds-WP_001194534.1;Parent=gene-AD12_RS19560;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AD12_RS19560;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 169246 169941 . - . ID=gene-AD12_RS19555;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AD12_RS19555;old_locus_tag=AD12_0581 NZ_JJLK01000049.1 Protein Homology CDS 169246 169941 . - 0 ID=cds-WP_000817229.1;Parent=gene-AD12_RS19555;Dbxref=GenBank:WP_000817229.1;Name=WP_000817229.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=AD12_RS19555;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817229.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 170006 171706 . - . ID=gene-AD12_RS19550;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AD12_RS19550;old_locus_tag=AD12_0582 NZ_JJLK01000049.1 Protein Homology CDS 170006 171706 . - 0 ID=cds-WP_001238231.1;Parent=gene-AD12_RS19550;Dbxref=GenBank:WP_001238231.1;Name=WP_001238231.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AD12_RS19550;product=SgrR family transcriptional regulator;protein_id=WP_001238231.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 171806 172624 . + . ID=gene-AD12_RS19545;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AD12_RS19545;old_locus_tag=AD12_0583 NZ_JJLK01000049.1 Protein Homology CDS 171806 172624 . + 0 ID=cds-WP_000113027.1;Parent=gene-AD12_RS19545;Dbxref=GenBank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AD12_RS19545;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 172777 173235 . + . ID=gene-AD12_RS19540;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AD12_RS19540;old_locus_tag=AD12_0584 NZ_JJLK01000049.1 Protein Homology CDS 172777 173235 . + 0 ID=cds-WP_000884589.1;Parent=gene-AD12_RS19540;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AD12_RS19540;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 173265 175037 . + . ID=gene-AD12_RS19535;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AD12_RS19535;old_locus_tag=AD12_0585 NZ_JJLK01000049.1 Protein Homology CDS 173265 175037 . + 0 ID=cds-WP_001235609.1;Parent=gene-AD12_RS19535;Dbxref=GenBank:WP_001235609.1;Name=WP_001235609.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706342.1;locus_tag=AD12_RS19535;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235609.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 175030 176811 . + . ID=gene-AD12_RS19530;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AD12_RS19530;old_locus_tag=AD12_0586 NZ_JJLK01000049.1 Protein Homology CDS 175030 176811 . + 0 ID=cds-WP_001256174.1;Parent=gene-AD12_RS19530;Dbxref=GenBank:WP_001256174.1;Name=WP_001256174.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AD12_RS19530;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256174.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 176992 177330 . + . ID=gene-AD12_RS19525;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AD12_RS19525;old_locus_tag=AD12_0588 NZ_JJLK01000049.1 Protein Homology CDS 176992 177330 . + 0 ID=cds-WP_000780338.1;Parent=gene-AD12_RS19525;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AD12_RS19525;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 177360 178646 . + . ID=gene-AD12_RS19520;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AD12_RS19520;old_locus_tag=AD12_0589 NZ_JJLK01000049.1 Protein Homology CDS 177360 178646 . + 0 ID=cds-WP_000685029.1;Parent=gene-AD12_RS19520;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AD12_RS19520;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 178695 179555 . - . ID=gene-AD12_RS19515;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AD12_RS19515;old_locus_tag=AD12_0590 NZ_JJLK01000049.1 Protein Homology CDS 178695 179555 . - 0 ID=cds-WP_000075876.1;Parent=gene-AD12_RS19515;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AD12_RS19515;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 179773 180345 . + . ID=gene-AD12_RS19510;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AD12_RS19510;old_locus_tag=AD12_0591 NZ_JJLK01000049.1 Protein Homology CDS 179773 180345 . + 0 ID=cds-WP_000779831.1;Parent=gene-AD12_RS19510;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AD12_RS19510;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 180376 180687 . - . ID=gene-AD12_RS19505;Name=AD12_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19505;old_locus_tag=AD12_0592 NZ_JJLK01000049.1 Protein Homology CDS 180376 180687 . - 0 ID=cds-WP_000409911.1;Parent=gene-AD12_RS19505;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AD12_RS19505;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 180850 180946 . + . ID=gene-AD12_RS25725;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AD12_RS25725 NZ_JJLK01000049.1 cmsearch SRP_RNA 180850 180946 . + . ID=rna-AD12_RS25725;Parent=gene-AD12_RS25725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25725;product=signal recognition particle sRNA small type NZ_JJLK01000049.1 cmsearch exon 180850 180946 . + . ID=exon-AD12_RS25725-1;Parent=rna-AD12_RS25725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25725;product=signal recognition particle sRNA small type NZ_JJLK01000049.1 RefSeq gene 181066 181419 . + . ID=gene-AD12_RS19500;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AD12_RS19500;old_locus_tag=AD12_0593 NZ_JJLK01000049.1 Protein Homology CDS 181066 181419 . + 0 ID=cds-WP_000878140.1;Parent=gene-AD12_RS19500;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AD12_RS19500;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 181461 183011 . - . ID=gene-AD12_RS19495;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AD12_RS19495;old_locus_tag=AD12_0594 NZ_JJLK01000049.1 Protein Homology CDS 181461 183011 . - 0 ID=cds-WP_001299455.1;Parent=gene-AD12_RS19495;Dbxref=GenBank:WP_001299455.1;Name=WP_001299455.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308537.2;locus_tag=AD12_RS19495;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001299455.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 183175 183645 . - . ID=gene-AD12_RS19490;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AD12_RS19490;old_locus_tag=AD12_0595 NZ_JJLK01000049.1 Protein Homology CDS 183175 183645 . - 0 ID=cds-WP_000136192.1;Parent=gene-AD12_RS19490;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AD12_RS19490;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 183761 184312 . - . ID=gene-AD12_RS19485;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AD12_RS19485;old_locus_tag=AD12_0596 NZ_JJLK01000049.1 Protein Homology CDS 183761 184312 . - 0 ID=cds-WP_000102568.1;Parent=gene-AD12_RS19485;Dbxref=GenBank:WP_000102568.1;Name=WP_000102568.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AD12_RS19485;product=maltose O-acetyltransferase;protein_id=WP_000102568.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 184484 184702 . - . ID=gene-AD12_RS19480;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD12_RS19480;old_locus_tag=AD12_0597 NZ_JJLK01000049.1 Protein Homology CDS 184484 184702 . - 0 ID=cds-WP_001291435.1;Parent=gene-AD12_RS19480;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AD12_RS19480;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 184728 185102 . - . ID=gene-AD12_RS19475;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AD12_RS19475;old_locus_tag=AD12_0598 NZ_JJLK01000049.1 Protein Homology CDS 184728 185102 . - 0 ID=cds-WP_000344800.1;Parent=gene-AD12_RS19475;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AD12_RS19475;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 185648 188797 . - . ID=gene-AD12_RS19470;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AD12_RS19470;old_locus_tag=AD12_0599 NZ_JJLK01000049.1 Protein Homology CDS 185648 188797 . - 0 ID=cds-WP_001132469.1;Parent=gene-AD12_RS19470;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AD12_RS19470;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 188820 190013 . - . ID=gene-AD12_RS19465;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AD12_RS19465;old_locus_tag=AD12_0600 NZ_JJLK01000049.1 Protein Homology CDS 188820 190013 . - 0 ID=cds-WP_001295324.1;Parent=gene-AD12_RS19465;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AD12_RS19465;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 190155 190802 . + . ID=gene-AD12_RS19460;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AD12_RS19460;old_locus_tag=AD12_0601 NZ_JJLK01000049.1 Protein Homology CDS 190155 190802 . + 0 ID=cds-WP_000101737.1;Parent=gene-AD12_RS19460;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AD12_RS19460;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 190930 194292 . + . ID=gene-AD12_RS19455;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AD12_RS19455;old_locus_tag=AD12_0602 NZ_JJLK01000049.1 Protein Homology CDS 190930 194292 . + 0 ID=cds-WP_032286342.1;Parent=gene-AD12_RS19455;Dbxref=GenBank:WP_032286342.1;Name=WP_032286342.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706358.1;locus_tag=AD12_RS19455;product=mechanosensitive channel MscK;protein_id=WP_032286342.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 194504 194665 . - . ID=gene-AD12_RS19450;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AD12_RS19450;old_locus_tag=AD12_0603 NZ_JJLK01000049.1 Protein Homology CDS 194504 194665 . - 0 ID=cds-WP_000051146.1;Parent=gene-AD12_RS19450;Dbxref=GenBank:WP_000051146.1;Name=WP_000051146.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AD12_RS19450;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051146.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 194679 195206 . - . ID=gene-AD12_RS19445;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AD12_RS19445;old_locus_tag=AD12_0604 NZ_JJLK01000049.1 Protein Homology CDS 194679 195206 . - 0 ID=cds-WP_000844848.1;Parent=gene-AD12_RS19445;Dbxref=GenBank:WP_000844848.1;Name=WP_000844848.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AD12_RS19445;product=primosomal replication protein N'';protein_id=WP_000844848.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 195276 195653 . + . ID=gene-AD12_RS19440;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AD12_RS19440;old_locus_tag=AD12_0605 NZ_JJLK01000049.1 Protein Homology CDS 195276 195653 . + 0 ID=cds-WP_001188905.1;Parent=gene-AD12_RS19440;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AD12_RS19440;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 195806 196357 . + . ID=gene-AD12_RS19435;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AD12_RS19435;old_locus_tag=AD12_0606 NZ_JJLK01000049.1 Protein Homology CDS 195806 196357 . + 0 ID=cds-WP_000127356.1;Parent=gene-AD12_RS19435;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AD12_RS19435;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 196486 198417 . + . ID=gene-AD12_RS19430;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AD12_RS19430;old_locus_tag=AD12_0607 NZ_JJLK01000049.1 Protein Homology CDS 196486 198417 . + 0 ID=cds-WP_000122008.1;Parent=gene-AD12_RS19430;Dbxref=GenBank:WP_000122008.1;Name=WP_000122008.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=AD12_RS19430;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122008.1;transl_table=11 NZ_JJLK01000049.1 cmsearch sequence_feature 197750 197814 . + . ID=id-AD12_RS19430;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS19430 NZ_JJLK01000049.1 RefSeq gene 198470 198799 . + . ID=gene-AD12_RS19425;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AD12_RS19425;old_locus_tag=AD12_0608 NZ_JJLK01000049.1 Protein Homology CDS 198470 198799 . + 0 ID=cds-WP_000467098.1;Parent=gene-AD12_RS19425;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AD12_RS19425;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 198799 199404 . + . ID=gene-AD12_RS19420;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AD12_RS19420;old_locus_tag=AD12_0609 NZ_JJLK01000049.1 Protein Homology CDS 198799 199404 . + 0 ID=cds-WP_001195025.1;Parent=gene-AD12_RS19420;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AD12_RS19420;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 199514 201388 . + . ID=gene-AD12_RS19415;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AD12_RS19415;old_locus_tag=AD12_0610 NZ_JJLK01000049.1 Protein Homology CDS 199514 201388 . + 0 ID=cds-WP_000678213.1;Parent=gene-AD12_RS19415;Dbxref=GenBank:WP_000678213.1;Name=WP_000678213.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AD12_RS19415;product=molecular chaperone HtpG;protein_id=WP_000678213.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 201569 202213 . + . ID=gene-AD12_RS19410;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AD12_RS19410;old_locus_tag=AD12_0611 NZ_JJLK01000049.1 Protein Homology CDS 201569 202213 . + 0 ID=cds-WP_001220233.1;Parent=gene-AD12_RS19410;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AD12_RS19410;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 202455 203417 . + . ID=gene-AD12_RS19405;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AD12_RS19405;old_locus_tag=AD12_0612 NZ_JJLK01000049.1 Protein Homology CDS 202455 203417 . + 0 ID=cds-WP_001250088.1;Parent=gene-AD12_RS19405;Dbxref=GenBank:WP_001250088.1;Name=WP_001250088.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308555.1;locus_tag=AD12_RS19405;product=ferrochelatase;protein_id=WP_001250088.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 203414 204373 . - . ID=gene-AD12_RS19400;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AD12_RS19400;old_locus_tag=AD12_0613 NZ_JJLK01000049.1 Protein Homology CDS 203414 204373 . - 0 ID=cds-WP_000801846.1;Parent=gene-AD12_RS19400;Dbxref=GenBank:WP_000801846.1;Name=WP_000801846.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AD12_RS19400;product=acetyl esterase;protein_id=WP_000801846.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 204525 205829 . + . ID=gene-AD12_RS19395;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AD12_RS19395;old_locus_tag=AD12_0614 NZ_JJLK01000049.1 Protein Homology CDS 204525 205829 . + 0 ID=cds-WP_000671574.1;Parent=gene-AD12_RS19395;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AD12_RS19395;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 205962 207638 . - . ID=gene-AD12_RS19390;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AD12_RS19390;old_locus_tag=AD12_0615 NZ_JJLK01000049.1 Protein Homology CDS 205962 207638 . - 0 ID=cds-WP_000546228.1;Parent=gene-AD12_RS19390;Dbxref=GenBank:WP_000546228.1;Name=WP_000546228.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308558.1;locus_tag=AD12_RS19390;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546228.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 207876 209096 . - . ID=gene-AD12_RS19385;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AD12_RS19385;old_locus_tag=AD12_0616 NZ_JJLK01000049.1 Protein Homology CDS 207876 209096 . - 0 ID=cds-WP_001251614.1;Parent=gene-AD12_RS19385;Dbxref=GenBank:WP_001251614.1;Name=WP_001251614.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AD12_RS19385;product=fosmidomycin MFS transporter;protein_id=WP_001251614.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 209314 210966 . + . ID=gene-AD12_RS19380;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AD12_RS19380;old_locus_tag=AD12_0617 NZ_JJLK01000049.1 Protein Homology CDS 209314 210966 . + 0 ID=cds-WP_000771766.1;Parent=gene-AD12_RS19380;Dbxref=GenBank:WP_000771766.1;Name=WP_000771766.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AD12_RS19380;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_000771766.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 211003 211482 . - . ID=gene-AD12_RS19375;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AD12_RS19375;old_locus_tag=AD12_0618 NZ_JJLK01000049.1 Protein Homology CDS 211003 211482 . - 0 ID=cds-WP_000186631.1;Parent=gene-AD12_RS19375;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AD12_RS19375;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 211686 212480 . - . ID=gene-AD12_RS19370;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AD12_RS19370;old_locus_tag=AD12_0619 NZ_JJLK01000049.1 Protein Homology CDS 211686 212480 . - 0 ID=cds-WP_000365183.1;Parent=gene-AD12_RS19370;Dbxref=GenBank:WP_000365183.1;Name=WP_000365183.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AD12_RS19370;product=TraB/GumN family protein;protein_id=WP_000365183.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 212618 212959 . + . ID=gene-AD12_RS19365;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AD12_RS19365;old_locus_tag=AD12_0620 NZ_JJLK01000049.1 Protein Homology CDS 212618 212959 . + 0 ID=cds-WP_001361120.1;Parent=gene-AD12_RS19365;Dbxref=GenBank:WP_001361120.1;Name=WP_001361120.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AD12_RS19365;product=HigA family addiction module antitoxin;protein_id=WP_001361120.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 213073 215577 . - . ID=gene-AD12_RS19360;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AD12_RS19360;old_locus_tag=AD12_0621 NZ_JJLK01000049.1 Protein Homology CDS 213073 215577 . - 0 ID=cds-WP_032286343.1;Parent=gene-AD12_RS19360;Dbxref=GenBank:WP_032286343.1;Name=WP_032286343.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AD12_RS19360;product=copper-exporting P-type ATPase CopA;protein_id=WP_032286343.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 215839 216771 . + . ID=gene-AD12_RS19355;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AD12_RS19355;old_locus_tag=AD12_0622 NZ_JJLK01000049.1 Protein Homology CDS 215839 216771 . + 0 ID=cds-WP_000883016.1;Parent=gene-AD12_RS19355;Dbxref=GenBank:WP_000883016.1;Name=WP_000883016.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=AD12_RS19355;product=glutaminase A;protein_id=WP_000883016.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 216774 218066 . + . ID=gene-AD12_RS19350;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AD12_RS19350;old_locus_tag=AD12_0623 NZ_JJLK01000049.1 Protein Homology CDS 216774 218066 . + 0 ID=cds-WP_000982172.1;Parent=gene-AD12_RS19350;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AD12_RS19350;product=APC family permease;protein_id=WP_000982172.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 218097 218194 . + . ID=gene-AD12_RS29450;Name=AD12_RS29450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29450;partial=true;pseudo=true;start_range=.,218097 NZ_JJLK01000049.1 Protein Homology CDS 218097 218194 . + 0 ID=cds-AD12_RS29450;Parent=gene-AD12_RS29450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AD12_RS29450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,218097;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 218191 218598 . + . ID=gene-AD12_RS19345;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AD12_RS19345;old_locus_tag=AD12_0624 NZ_JJLK01000049.1 Protein Homology CDS 218191 218598 . + 0 ID=cds-WP_001026747.1;Parent=gene-AD12_RS19345;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AD12_RS19345;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 218599 219057 . - . ID=gene-AD12_RS19340;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AD12_RS19340;old_locus_tag=AD12_0625 NZ_JJLK01000049.1 Protein Homology CDS 218599 219057 . - 0 ID=cds-WP_000970321.1;Parent=gene-AD12_RS19340;Dbxref=GenBank:WP_000970321.1;Name=WP_000970321.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AD12_RS19340;product=NfeD family protein;protein_id=WP_000970321.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 219054 219971 . - . ID=gene-AD12_RS19335;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AD12_RS19335;old_locus_tag=AD12_0626 NZ_JJLK01000049.1 Protein Homology CDS 219054 219971 . - 0 ID=cds-WP_000904502.1;Parent=gene-AD12_RS19335;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AD12_RS19335;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 220117 220794 . + . ID=gene-AD12_RS19330;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AD12_RS19330;old_locus_tag=AD12_0627 NZ_JJLK01000049.1 Protein Homology CDS 220117 220794 . + 0 ID=cds-WP_001157550.1;Parent=gene-AD12_RS19330;Dbxref=GenBank:WP_001157550.1;Name=WP_001157550.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308580.1;locus_tag=AD12_RS19330;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157550.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 220781 221560 . + . ID=gene-AD12_RS19325;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AD12_RS19325;old_locus_tag=AD12_0628 NZ_JJLK01000049.1 Protein Homology CDS 220781 221560 . + 0 ID=cds-WP_001323739.1;Parent=gene-AD12_RS19325;Dbxref=GenBank:WP_001323739.1;Name=WP_001323739.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AD12_RS19325;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001323739.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 221623 222477 . - . ID=gene-AD12_RS19320;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AD12_RS19320;old_locus_tag=AD12_0629 NZ_JJLK01000049.1 Protein Homology CDS 221623 222477 . - 0 ID=cds-WP_001295322.1;Parent=gene-AD12_RS19320;Dbxref=GenBank:WP_001295322.1;Name=WP_001295322.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308582.2;locus_tag=AD12_RS19320;product=chaperedoxin;protein_id=WP_001295322.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 222538 223347 . - . ID=gene-AD12_RS19315;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AD12_RS19315;old_locus_tag=AD12_0630 NZ_JJLK01000049.1 Protein Homology CDS 222538 223347 . - 0 ID=cds-WP_000148959.1;Parent=gene-AD12_RS19315;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AD12_RS19315;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 223337 223960 . - . ID=gene-AD12_RS19310;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AD12_RS19310;old_locus_tag=AD12_0631 NZ_JJLK01000049.1 Protein Homology CDS 223337 223960 . - 0 ID=cds-WP_001295836.1;Parent=gene-AD12_RS19310;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AD12_RS19310;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 223931 224617 . + . ID=gene-AD12_RS19305;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AD12_RS19305;old_locus_tag=AD12_0632 NZ_JJLK01000049.1 Protein Homology CDS 223931 224617 . + 0 ID=cds-WP_001110573.1;Parent=gene-AD12_RS19305;Dbxref=GenBank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AD12_RS19305;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110573.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 224614 227028 . + . ID=gene-AD12_RS19300;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AD12_RS19300;old_locus_tag=AD12_0633 NZ_JJLK01000049.1 Protein Homology CDS 224614 227028 . + 0 ID=cds-WP_000561866.1;Parent=gene-AD12_RS19300;Dbxref=GenBank:WP_000561866.1;Name=WP_000561866.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AD12_RS19300;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561866.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 227246 227401 . - . ID=gene-AD12_RS29870;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AD12_RS29870;old_locus_tag=AD12_0634 NZ_JJLK01000049.1 Protein Homology CDS 227246 227401 . - 0 ID=cds-WP_001308457.1;Parent=gene-AD12_RS29870;Dbxref=GenBank:WP_001308457.1;Name=WP_001308457.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: protein motif:HMM:NF041472.1;locus_tag=AD12_RS29870;product=damage-inducible type I toxin DinQ;protein_id=WP_001308457.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 227740 228834 . - . ID=gene-AD12_RS19295;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AD12_RS19295;old_locus_tag=AD12_0635 NZ_JJLK01000049.1 Protein Homology CDS 227740 228834 . - 0 ID=cds-WP_001157933.1;Parent=gene-AD12_RS19295;Dbxref=GenBank:WP_001157933.1;Name=WP_001157933.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308591.1;locus_tag=AD12_RS19295;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157933.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 228903 229829 . - . ID=gene-AD12_RS19290;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AD12_RS19290;old_locus_tag=AD12_0636 NZ_JJLK01000049.1 Protein Homology CDS 228903 229829 . - 0 ID=cds-WP_000460145.1;Parent=gene-AD12_RS19290;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AD12_RS19290;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 230059 230541 . + . ID=gene-AD12_RS19285;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AD12_RS19285;old_locus_tag=AD12_0637 NZ_JJLK01000049.1 Protein Homology CDS 230059 230541 . + 0 ID=cds-WP_032286344.1;Parent=gene-AD12_RS19285;Dbxref=GenBank:WP_032286344.1;Name=WP_032286344.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AD12_RS19285;product=ureidoglycolate lyase;protein_id=WP_032286344.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 230619 231434 . + . ID=gene-AD12_RS19280;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AD12_RS19280;old_locus_tag=AD12_0638 NZ_JJLK01000049.1 Protein Homology CDS 230619 231434 . + 0 ID=cds-WP_000141275.1;Parent=gene-AD12_RS19280;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AD12_RS19280;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 231524 233305 . + . ID=gene-AD12_RS19275;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AD12_RS19275;old_locus_tag=AD12_0639 NZ_JJLK01000049.1 Protein Homology CDS 231524 233305 . + 0 ID=cds-WP_032286345.1;Parent=gene-AD12_RS19275;Dbxref=GenBank:WP_032286345.1;Name=WP_032286345.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AD12_RS19275;product=glyoxylate carboligase;protein_id=WP_032286345.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 233318 234094 . + . ID=gene-AD12_RS19270;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AD12_RS19270;old_locus_tag=AD12_0640 NZ_JJLK01000049.1 Protein Homology CDS 233318 234094 . + 0 ID=cds-WP_000943556.1;Parent=gene-AD12_RS19270;Dbxref=GenBank:WP_000943556.1;Name=WP_000943556.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=AD12_RS19270;product=hydroxypyruvate isomerase;protein_id=WP_000943556.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 234194 235072 . + . ID=gene-AD12_RS19265;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AD12_RS19265;old_locus_tag=AD12_0641 NZ_JJLK01000049.1 Protein Homology CDS 234194 235072 . + 0 ID=cds-WP_000765839.1;Parent=gene-AD12_RS19265;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AD12_RS19265;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 235241 236695 . + . ID=gene-AD12_RS19260;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AD12_RS19260;old_locus_tag=AD12_0642 NZ_JJLK01000049.1 Protein Homology CDS 235241 236695 . + 0 ID=cds-WP_000401133.1;Parent=gene-AD12_RS19260;Dbxref=GenBank:WP_000401133.1;Name=WP_000401133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AD12_RS19260;product=allantoin transporter;protein_id=WP_000401133.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 236755 238116 . + . ID=gene-AD12_RS19255;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AD12_RS19255;old_locus_tag=AD12_0643 NZ_JJLK01000049.1 Protein Homology CDS 236755 238116 . + 0 ID=cds-WP_032286346.1;Parent=gene-AD12_RS19255;Dbxref=GenBank:WP_032286346.1;Name=WP_032286346.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AD12_RS19255;product=allantoinase AllB;protein_id=WP_032286346.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 238173 239474 . + . ID=gene-AD12_RS19250;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AD12_RS19250;old_locus_tag=AD12_0644 NZ_JJLK01000049.1 Protein Homology CDS 238173 239474 . + 0 ID=cds-WP_001298987.1;Parent=gene-AD12_RS19250;Dbxref=GenBank:WP_001298987.1;Name=WP_001298987.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AD12_RS19250;product=uracil/xanthine transporter;protein_id=WP_001298987.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 239496 240641 . + . ID=gene-AD12_RS19245;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AD12_RS19245;old_locus_tag=AD12_0645 NZ_JJLK01000049.1 Protein Homology CDS 239496 240641 . + 0 ID=cds-WP_001299453.1;Parent=gene-AD12_RS19245;Dbxref=GenBank:WP_001299453.1;Name=WP_001299453.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AD12_RS19245;product=glycerate 3-kinase;protein_id=WP_001299453.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 240869 241654 . - . ID=gene-AD12_RS19240;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AD12_RS19240;old_locus_tag=AD12_0646 NZ_JJLK01000049.1 Protein Homology CDS 240869 241654 . - 0 ID=cds-WP_000540949.1;Parent=gene-AD12_RS19240;Dbxref=GenBank:WP_000540949.1;Name=WP_000540949.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AD12_RS19240;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540949.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 241665 242900 . - . ID=gene-AD12_RS19235;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AD12_RS19235;old_locus_tag=AD12_0647 NZ_JJLK01000049.1 Protein Homology CDS 241665 242900 . - 0 ID=cds-WP_001391127.1;Parent=gene-AD12_RS19235;Dbxref=GenBank:WP_001391127.1;Name=WP_001391127.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AD12_RS19235;product=allantoate deiminase;protein_id=WP_001391127.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 242922 243971 . - . ID=gene-AD12_RS19230;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AD12_RS19230;old_locus_tag=AD12_0648 NZ_JJLK01000049.1 Protein Homology CDS 242922 243971 . - 0 ID=cds-WP_000703894.1;Parent=gene-AD12_RS19230;Dbxref=GenBank:WP_000703894.1;Name=WP_000703894.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415050.1;locus_tag=AD12_RS19230;product=ureidoglycolate dehydrogenase;protein_id=WP_000703894.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 244288 245955 . + . ID=gene-AD12_RS19225;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AD12_RS19225;old_locus_tag=AD12_0649 NZ_JJLK01000049.1 Protein Homology CDS 244288 245955 . + 0 ID=cds-WP_032286347.1;Parent=gene-AD12_RS19225;Dbxref=GenBank:WP_032286347.1;Name=WP_032286347.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AD12_RS19225;product=acyl-CoA synthetase FdrA;protein_id=WP_032286347.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 245965 247224 . + . ID=gene-AD12_RS19220;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AD12_RS19220;old_locus_tag=AD12_0650 NZ_JJLK01000049.1 Protein Homology CDS 245965 247224 . + 0 ID=cds-WP_000495365.1;Parent=gene-AD12_RS19220;Dbxref=GenBank:WP_000495365.1;Name=WP_000495365.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AD12_RS19220;product=DUF1116 domain-containing protein;protein_id=WP_000495365.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 247235 248050 . + . ID=gene-AD12_RS19215;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AD12_RS19215;old_locus_tag=AD12_0651 NZ_JJLK01000049.1 Protein Homology CDS 247235 248050 . + 0 ID=cds-WP_032286348.1;Parent=gene-AD12_RS19215;Dbxref=GenBank:WP_032286348.1;Name=WP_032286348.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AD12_RS19215;product=DUF2877 domain-containing protein;protein_id=WP_032286348.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 248047 248940 . + . ID=gene-AD12_RS19210;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AD12_RS19210;old_locus_tag=AD12_0652 NZ_JJLK01000049.1 Protein Homology CDS 248047 248940 . + 0 ID=cds-WP_000855355.1;Parent=gene-AD12_RS19210;Dbxref=GenBank:WP_000855355.1;Name=WP_000855355.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AD12_RS19210;product=carbamate kinase;protein_id=WP_000855355.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 249077 250144 . - . ID=gene-AD12_RS19205;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AD12_RS19205;old_locus_tag=AD12_0653 NZ_JJLK01000049.1 Protein Homology CDS 249077 250144 . - 0 ID=cds-WP_000815573.1;Parent=gene-AD12_RS19205;Dbxref=GenBank:WP_000815573.1;Name=WP_000815573.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706400.2;locus_tag=AD12_RS19205;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815573.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 250141 250650 . - . ID=gene-AD12_RS19200;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AD12_RS19200;old_locus_tag=AD12_0654 NZ_JJLK01000049.1 Protein Homology CDS 250141 250650 . - 0 ID=cds-WP_001295318.1;Parent=gene-AD12_RS19200;Dbxref=GenBank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AD12_RS19200;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 250768 251490 . - . ID=gene-AD12_RS19195;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AD12_RS19195;old_locus_tag=AD12_0655 NZ_JJLK01000049.1 Protein Homology CDS 250768 251490 . - 0 ID=cds-WP_000212251.1;Parent=gene-AD12_RS19195;Dbxref=GenBank:WP_000212251.1;Name=WP_000212251.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=AD12_RS19195;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212251.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 251493 251987 . - . ID=gene-AD12_RS19190;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AD12_RS19190;old_locus_tag=AD12_0656 NZ_JJLK01000049.1 Protein Homology CDS 251493 251987 . - 0 ID=cds-WP_000255997.1;Parent=gene-AD12_RS19190;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AD12_RS19190;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 252161 253546 . + . ID=gene-AD12_RS19185;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AD12_RS19185;old_locus_tag=AD12_0657 NZ_JJLK01000049.1 Protein Homology CDS 252161 253546 . + 0 ID=cds-WP_000912345.1;Parent=gene-AD12_RS19185;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AD12_RS19185;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 253582 254103 . - . ID=gene-AD12_RS19180;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AD12_RS19180;old_locus_tag=AD12_0658 NZ_JJLK01000049.1 Protein Homology CDS 253582 254103 . - 0 ID=cds-WP_001143558.1;Parent=gene-AD12_RS19180;Dbxref=GenBank:WP_001143558.1;Name=WP_001143558.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AD12_RS19180;product=metal-dependent hydrolase;protein_id=WP_001143558.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 254211 254423 . - . ID=gene-AD12_RS19175;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AD12_RS19175;old_locus_tag=AD12_0659 NZ_JJLK01000049.1 Protein Homology CDS 254211 254423 . - 0 ID=cds-WP_000190288.1;Parent=gene-AD12_RS19175;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AD12_RS19175;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 254425 255291 . - . ID=gene-AD12_RS19170;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AD12_RS19170;old_locus_tag=AD12_0660 NZ_JJLK01000049.1 Protein Homology CDS 254425 255291 . - 0 ID=cds-WP_000729160.1;Parent=gene-AD12_RS19170;Dbxref=GenBank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=AD12_RS19170;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 255762 256304 . + . ID=gene-AD12_RS19165;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AD12_RS19165;old_locus_tag=AD12_0661 NZ_JJLK01000049.1 Protein Homology CDS 255762 256304 . + 0 ID=cds-WP_000776555.1;Parent=gene-AD12_RS19165;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AD12_RS19165;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 256524 257216 . + . ID=gene-AD12_RS19160;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AD12_RS19160;old_locus_tag=AD12_0663 NZ_JJLK01000049.1 Protein Homology CDS 256524 257216 . + 0 ID=cds-WP_000988366.1;Parent=gene-AD12_RS19160;Dbxref=GenBank:WP_000988366.1;Name=WP_000988366.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AD12_RS19160;product=type 1 fimbria chaperone FimC;protein_id=WP_000988366.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 257247 259855 . + . ID=gene-AD12_RS19155;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=pseudogene;locus_tag=AD12_RS19155;old_locus_tag=AD12_0664;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 257247 259855 . + 0 ID=cds-AD12_RS19155;Parent=gene-AD12_RS19155;Note=frameshifted;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AD12_RS19155;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 259868 260875 . + . ID=gene-AD12_RS19150;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AD12_RS19150;old_locus_tag=AD12_0666 NZ_JJLK01000049.1 Protein Homology CDS 259868 260875 . + 0 ID=cds-WP_027662034.1;Parent=gene-AD12_RS19150;Dbxref=GenBank:WP_027662034.1;Name=WP_027662034.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AD12_RS19150;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_027662034.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 260886 261401 . + . ID=gene-AD12_RS19145;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AD12_RS19145;old_locus_tag=AD12_0667 NZ_JJLK01000049.1 Protein Homology CDS 260886 261401 . + 0 ID=cds-WP_032284650.1;Parent=gene-AD12_RS19145;Dbxref=GenBank:WP_032284650.1;Name=WP_032284650.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AD12_RS19145;product=fimbria assembly protein;protein_id=WP_032284650.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 261404 262036 . - . ID=gene-AD12_RS19140;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AD12_RS19140;old_locus_tag=AD12_0668 NZ_JJLK01000049.1 Protein Homology CDS 261404 262036 . - 0 ID=cds-WP_000805432.1;Parent=gene-AD12_RS19140;Dbxref=GenBank:WP_000805432.1;Name=WP_000805432.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AD12_RS19140;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805432.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 262279 262355 . + . ID=gene-AD12_RS19135;Name=AD12_RS19135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS19135;old_locus_tag=AD12_0669 NZ_JJLK01000049.1 tRNAscan-SE tRNA 262279 262355 . + . ID=rna-AD12_RS19135;Parent=gene-AD12_RS19135;anticodon=(pos:262313..262315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS19135;product=tRNA-Arg NZ_JJLK01000049.1 tRNAscan-SE exon 262279 262355 . + . ID=exon-AD12_RS19135-1;Parent=rna-AD12_RS19135;anticodon=(pos:262313..262315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS19135;product=tRNA-Arg NZ_JJLK01000049.1 RefSeq gene 262401 263162 . - . ID=gene-AD12_RS19130;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AD12_RS19130;old_locus_tag=AD12_0670 NZ_JJLK01000049.1 Protein Homology CDS 262401 263162 . - 0 ID=cds-WP_001177453.1;Parent=gene-AD12_RS19130;Dbxref=GenBank:WP_001177453.1;Name=WP_001177453.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AD12_RS19130;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177453.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 263345 264235 . - . ID=gene-AD12_RS19125;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AD12_RS19125;old_locus_tag=AD12_0671 NZ_JJLK01000049.1 Protein Homology CDS 263345 264235 . - 0 ID=cds-WP_001224569.1;Parent=gene-AD12_RS19125;Dbxref=GenBank:WP_001224569.1;Name=WP_001224569.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=AD12_RS19125;product=DUF4434 family protein;protein_id=WP_001224569.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 264236 267061 . - . ID=gene-AD12_RS19120;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AD12_RS19120;old_locus_tag=AD12_0672 NZ_JJLK01000049.1 Protein Homology CDS 264236 267061 . - 0 ID=cds-WP_032286350.1;Parent=gene-AD12_RS19120;Dbxref=GenBank:WP_032286350.1;Name=WP_032286350.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AD12_RS19120;product=phage receptor;protein_id=WP_032286350.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 267048 269285 . - . ID=gene-AD12_RS19115;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AD12_RS19115;old_locus_tag=AD12_0673 NZ_JJLK01000049.1 Protein Homology CDS 267048 269285 . - 0 ID=cds-WP_000383951.1;Parent=gene-AD12_RS19115;Dbxref=GenBank:WP_000383951.1;Name=WP_000383951.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AD12_RS19115;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;protein_id=WP_000383951.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 269554 270690 . - . ID=gene-AD12_RS19110;Name=AD12_RS19110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS19110;old_locus_tag=AD12_0674;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 269554 270690 . - 0 ID=cds-AD12_RS19110;Parent=gene-AD12_RS19110;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS19110;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 270831 271070 . - . ID=gene-AD12_RS19105;Name=ybfQ;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=AD12_RS19105;old_locus_tag=AD12_0675;partial=true;pseudo=true;start_range=.,270831 NZ_JJLK01000049.1 Protein Homology CDS 270831 271070 . - 0 ID=cds-AD12_RS19105;Parent=gene-AD12_RS19105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;gene=ybfQ;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557930.1;locus_tag=AD12_RS19105;partial=true;product=transposase family protein;pseudo=true;start_range=.,270831;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 271296 271865 . - . ID=gene-AD12_RS0123300;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=AD12_RS0123300 NZ_JJLK01000049.1 Protein Homology CDS 271296 271865 . - 0 ID=cds-WP_000832338.1;Parent=gene-AD12_RS0123300;Dbxref=GenBank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AD12_RS0123300;product=protein YbfC;protein_id=WP_000832338.1;transl_table=11 NZ_JJLK01000049.1 RefSeq pseudogene 271862 273382 . - . ID=gene-AD12_RS25730;Name=AD12_RS25730;end_range=273382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS25730;partial=true;pseudo=true NZ_JJLK01000049.1 Protein Homology CDS 271862 273382 . - 0 ID=cds-AD12_RS25730;Parent=gene-AD12_RS25730;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=273382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD12_RS25730;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 273413 273739 . - . ID=gene-AD12_RS0123305;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;locus_tag=AD12_RS0123305 NZ_JJLK01000049.1 Protein Homology CDS 273413 273739 . - 0 ID=cds-WP_000873944.1;Parent=gene-AD12_RS0123305;Dbxref=GenBank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AD12_RS0123305;product=protein YbfB;protein_id=WP_000873944.1;transl_table=11 NZ_JJLK01000049.1 RefSeq gene 273739 274453 . - . ID=gene-AD12_RS26240;Name=AD12_RS26240;end_range=274453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26240;old_locus_tag=AD12_0679;partial=true NZ_JJLK01000049.1 Protein Homology CDS 273739 274453 . - 1 ID=cds-WP_077745023.1;Parent=gene-AD12_RS26240;Dbxref=GenBank:WP_077745023.1;Name=WP_077745023.1;end_range=274453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD12_RS26240;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_077745023.1;transl_table=11 ##sequence-region NZ_JJLK01000050.1 1 144513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000050.1 RefSeq region 1 144513 . + . ID=NZ_JJLK01000050.1:1..144513;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000050.1 RefSeq gene 1 744 . - . ID=gene-AD12_RS19090;Name=AD12_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19090;old_locus_tag=AD12_0680;partial=true;start_range=.,1 NZ_JJLK01000050.1 Protein Homology CDS 1 744 . - 0 ID=cds-WP_032286355.1;Parent=gene-AD12_RS19090;Dbxref=GenBank:WP_032286355.1;Name=WP_032286355.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS19090;partial=true;product=ISAs1 family transposase;protein_id=WP_032286355.1;start_range=.,1;transl_table=11 NZ_JJLK01000050.1 RefSeq pseudogene 890 1069 . - . ID=gene-AD12_RS29875;Name=AD12_RS29875;end_range=1069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29875;partial=true;pseudo=true;start_range=.,890 NZ_JJLK01000050.1 Protein Homology CDS 890 1069 . - 0 ID=cds-AD12_RS29875;Parent=gene-AD12_RS29875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308632.1;locus_tag=AD12_RS29875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,890;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 1274 1483 . - . ID=gene-AD12_RS0123315;Name=AD12_RS0123315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123315 NZ_JJLK01000050.1 Protein Homology CDS 1274 1483 . - 0 ID=cds-WP_001299578.1;Parent=gene-AD12_RS0123315;Dbxref=GenBank:WP_001299578.1;Name=WP_001299578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001299578.1;locus_tag=AD12_RS0123315;product=hypothetical protein;protein_id=WP_001299578.1;transl_table=11 NZ_JJLK01000050.1 RefSeq pseudogene 1522 6384 . - . ID=gene-AD12_RS26245;Name=AD12_RS26245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS26245;pseudo=true NZ_JJLK01000050.1 Protein Homology CDS 1522 6384 . - 0 ID=cds-AD12_RS26245;Parent=gene-AD12_RS26245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616597.1;locus_tag=AD12_RS26245;product=zincin-like metallopeptidase toxin domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 6404 6865 . - . ID=gene-AD12_RS19070;Name=AD12_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19070;old_locus_tag=AD12_0684 NZ_JJLK01000050.1 Protein Homology CDS 6404 6865 . - 0 ID=cds-WP_001160804.1;Parent=gene-AD12_RS19070;Dbxref=GenBank:WP_001160804.1;Name=WP_001160804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=AD12_RS19070;product=DcrB-related protein;protein_id=WP_001160804.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 6893 8794 . - . ID=gene-AD12_RS19065;Name=AD12_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS19065;old_locus_tag=AD12_0685 NZ_JJLK01000050.1 Protein Homology CDS 6893 8794 . - 0 ID=cds-WP_000103231.1;Parent=gene-AD12_RS19065;Dbxref=GenBank:WP_000103231.1;Name=WP_000103231.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AD12_RS19065;product=type VI secretion system tip protein VgrG;protein_id=WP_000103231.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 9531 10979 . - . ID=gene-AD12_RS19060;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AD12_RS19060;old_locus_tag=AD12_0686 NZ_JJLK01000050.1 Protein Homology CDS 9531 10979 . - 0 ID=cds-WP_000253805.1;Parent=gene-AD12_RS19060;Dbxref=GenBank:WP_000253805.1;Name=WP_000253805.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AD12_RS19060;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253805.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 10969 11652 . - . ID=gene-AD12_RS19055;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AD12_RS19055;old_locus_tag=AD12_0687 NZ_JJLK01000050.1 Protein Homology CDS 10969 11652 . - 0 ID=cds-WP_000770953.1;Parent=gene-AD12_RS19055;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AD12_RS19055;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 11809 13191 . + . ID=gene-AD12_RS19050;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AD12_RS19050;old_locus_tag=AD12_0688 NZ_JJLK01000050.1 Protein Homology CDS 11809 13191 . + 0 ID=cds-WP_000074237.1;Parent=gene-AD12_RS19050;Dbxref=GenBank:WP_000074237.1;Name=WP_000074237.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=AD12_RS19050;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074237.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 13215 13547 . + . ID=gene-AD12_RS19045;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AD12_RS19045;old_locus_tag=AD12_0689 NZ_JJLK01000050.1 Protein Homology CDS 13215 13547 . + 0 ID=cds-WP_000709865.1;Parent=gene-AD12_RS19045;Dbxref=GenBank:WP_000709865.1;Name=WP_000709865.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AD12_RS19045;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709865.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 13563 14786 . + . ID=gene-AD12_RS19040;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AD12_RS19040;old_locus_tag=AD12_0690 NZ_JJLK01000050.1 Protein Homology CDS 13563 14786 . + 0 ID=cds-WP_000717157.1;Parent=gene-AD12_RS19040;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AD12_RS19040;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 14798 17941 . + . ID=gene-AD12_RS19035;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AD12_RS19035;old_locus_tag=AD12_0691 NZ_JJLK01000050.1 Protein Homology CDS 14798 17941 . + 0 ID=cds-WP_001508445.1;Parent=gene-AD12_RS19035;Dbxref=GenBank:WP_001508445.1;Name=WP_001508445.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AD12_RS19035;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_001508445.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 18043 19419 . + . ID=gene-AD12_RS19030;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AD12_RS19030;old_locus_tag=AD12_0692 NZ_JJLK01000050.1 Protein Homology CDS 18043 19419 . + 0 ID=cds-WP_000786320.1;Parent=gene-AD12_RS19030;Dbxref=GenBank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AD12_RS19030;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 19487 20734 . - . ID=gene-AD12_RS19025;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AD12_RS19025;old_locus_tag=AD12_0693 NZ_JJLK01000050.1 Protein Homology CDS 19487 20734 . - 0 ID=cds-WP_001153146.1;Parent=gene-AD12_RS19025;Dbxref=GenBank:WP_001153146.1;Name=WP_001153146.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AD12_RS19025;product=mechanosensitive ion channel YbdG;protein_id=WP_001153146.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 20842 21495 . - . ID=gene-AD12_RS19020;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AD12_RS19020;old_locus_tag=AD12_0694 NZ_JJLK01000050.1 Protein Homology CDS 20842 21495 . - 0 ID=cds-WP_000351443.1;Parent=gene-AD12_RS19020;Dbxref=GenBank:WP_000351443.1;Name=WP_000351443.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AD12_RS19020;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351443.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 21589 21957 . - . ID=gene-AD12_RS19015;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=AD12_RS19015;old_locus_tag=AD12_0695 NZ_JJLK01000050.1 Protein Homology CDS 21589 21957 . - 0 ID=cds-WP_000360951.1;Parent=gene-AD12_RS19015;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AD12_RS19015;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 22022 22270 . - . ID=gene-AD12_RS19010;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=AD12_RS19010;old_locus_tag=AD12_0696 NZ_JJLK01000050.1 Protein Homology CDS 22022 22270 . - 0 ID=cds-WP_000682514.1;Parent=gene-AD12_RS19010;Dbxref=GenBank:WP_000682514.1;Name=WP_000682514.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AD12_RS19010;product=DUF1158 domain-containing protein;protein_id=WP_000682514.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 22336 23454 . - . ID=gene-AD12_RS19005;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=AD12_RS19005;old_locus_tag=AD12_0697 NZ_JJLK01000050.1 Protein Homology CDS 22336 23454 . - 0 ID=cds-WP_001130654.1;Parent=gene-AD12_RS19005;Dbxref=GenBank:WP_001130654.1;Name=WP_001130654.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AD12_RS19005;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130654.1;transl_table=11 NZ_JJLK01000050.1 RefSeq pseudogene 23670 23938 . - . ID=gene-AD12_RS29785;Name=AD12_RS29785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29785;pseudo=true NZ_JJLK01000050.1 Protein Homology CDS 23670 23938 . - 0 ID=cds-AD12_RS29785;Parent=gene-AD12_RS29785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AD12_RS29785;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 23907 24059 . + . ID=gene-AD12_RS19000;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AD12_RS19000;old_locus_tag=AD12_0698 NZ_JJLK01000050.1 Protein Homology CDS 23907 24059 . + 0 ID=cds-WP_000956455.1;Parent=gene-AD12_RS19000;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AD12_RS19000;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 24181 24801 . - . ID=gene-AD12_RS18995;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AD12_RS18995;old_locus_tag=AD12_0700 NZ_JJLK01000050.1 Protein Homology CDS 24181 24801 . - 0 ID=cds-WP_001749708.1;Parent=gene-AD12_RS18995;Dbxref=GenBank:WP_001749708.1;Name=WP_001749708.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AD12_RS18995;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 24976 27216 . - . ID=gene-AD12_RS18990;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AD12_RS18990;old_locus_tag=AD12_0701 NZ_JJLK01000050.1 Protein Homology CDS 24976 27216 . - 0 ID=cds-WP_001034904.1;Parent=gene-AD12_RS18990;Dbxref=GenBank:WP_001034904.1;Name=WP_001034904.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308650.1;locus_tag=AD12_RS18990;product=siderophore enterobactin receptor FepA;protein_id=WP_001034904.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 27459 28661 . + . ID=gene-AD12_RS18985;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AD12_RS18985;old_locus_tag=AD12_0703 NZ_JJLK01000050.1 Protein Homology CDS 27459 28661 . + 0 ID=cds-WP_000125800.1;Parent=gene-AD12_RS18985;Dbxref=GenBank:WP_000125800.1;Name=WP_000125800.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308651.2;locus_tag=AD12_RS18985;product=enterochelin esterase;protein_id=WP_000125800.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 28664 28882 . + . ID=gene-AD12_RS18980;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AD12_RS18980;old_locus_tag=AD12_0704 NZ_JJLK01000050.1 Protein Homology CDS 28664 28882 . + 0 ID=cds-WP_000885779.1;Parent=gene-AD12_RS18980;Dbxref=GenBank:WP_000885779.1;Name=WP_000885779.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AD12_RS18980;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885779.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 28879 32760 . + . ID=gene-AD12_RS18975;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AD12_RS18975;old_locus_tag=AD12_0705 NZ_JJLK01000050.1 Protein Homology CDS 28879 32760 . + 0 ID=cds-WP_032286356.1;Parent=gene-AD12_RS18975;Dbxref=GenBank:WP_032286356.1;Name=WP_032286356.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AD12_RS18975;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032286356.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 32976 34109 . + . ID=gene-AD12_RS18970;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AD12_RS18970;old_locus_tag=AD12_0706 NZ_JJLK01000050.1 Protein Homology CDS 32976 34109 . + 0 ID=cds-WP_000096719.1;Parent=gene-AD12_RS18970;Dbxref=GenBank:WP_000096719.1;Name=WP_000096719.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AD12_RS18970;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_000096719.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 34106 34921 . - . ID=gene-AD12_RS18965;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AD12_RS18965;old_locus_tag=AD12_0707 NZ_JJLK01000050.1 Protein Homology CDS 34106 34921 . - 0 ID=cds-WP_000140647.1;Parent=gene-AD12_RS18965;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AD12_RS18965;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 34918 35910 . - . ID=gene-AD12_RS18960;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AD12_RS18960;old_locus_tag=AD12_0708 NZ_JJLK01000050.1 Protein Homology CDS 34918 35910 . - 0 ID=cds-WP_000640948.1;Parent=gene-AD12_RS18960;Dbxref=GenBank:WP_000640948.1;Name=WP_000640948.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308655.1;locus_tag=AD12_RS18960;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640948.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 35907 36911 . - . ID=gene-AD12_RS18955;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AD12_RS18955;old_locus_tag=AD12_0709 NZ_JJLK01000050.1 Protein Homology CDS 35907 36911 . - 0 ID=cds-WP_001295314.1;Parent=gene-AD12_RS18955;Dbxref=GenBank:WP_001295314.1;Name=WP_001295314.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=AD12_RS18955;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001295314.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 37022 38272 . + . ID=gene-AD12_RS18950;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AD12_RS18950;old_locus_tag=AD12_0710 NZ_JJLK01000050.1 Protein Homology CDS 37022 38272 . + 0 ID=cds-WP_001041789.1;Parent=gene-AD12_RS18950;Dbxref=GenBank:WP_001041789.1;Name=WP_001041789.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AD12_RS18950;product=enterobactin transporter EntS;protein_id=WP_001041789.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 38276 39232 . - . ID=gene-AD12_RS18945;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AD12_RS18945;old_locus_tag=AD12_0711 NZ_JJLK01000050.1 Protein Homology CDS 38276 39232 . - 0 ID=cds-WP_032286357.1;Parent=gene-AD12_RS18945;Dbxref=GenBank:WP_032286357.1;Name=WP_032286357.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AD12_RS18945;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_032286357.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 39607 40782 . + . ID=gene-AD12_RS18940;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AD12_RS18940;old_locus_tag=AD12_0712 NZ_JJLK01000050.1 Protein Homology CDS 39607 40782 . + 0 ID=cds-WP_001295313.1;Parent=gene-AD12_RS18940;Dbxref=GenBank:WP_001295313.1;Name=WP_001295313.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AD12_RS18940;product=isochorismate synthase EntC;protein_id=WP_001295313.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 40792 42402 . + . ID=gene-AD12_RS18935;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AD12_RS18935;old_locus_tag=AD12_0713 NZ_JJLK01000050.1 Protein Homology CDS 40792 42402 . + 0 ID=cds-WP_000026805.1;Parent=gene-AD12_RS18935;Dbxref=GenBank:WP_000026805.1;Name=WP_000026805.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AD12_RS18935;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026805.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 42416 43273 . + . ID=gene-AD12_RS18930;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AD12_RS18930;old_locus_tag=AD12_0714 NZ_JJLK01000050.1 Protein Homology CDS 42416 43273 . + 0 ID=cds-WP_001007142.1;Parent=gene-AD12_RS18930;Dbxref=GenBank:WP_001007142.1;Name=WP_001007142.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AD12_RS18930;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007142.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 43273 44019 . + . ID=gene-AD12_RS18925;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AD12_RS18925;old_locus_tag=AD12_0715 NZ_JJLK01000050.1 Protein Homology CDS 43273 44019 . + 0 ID=cds-WP_000347664.1;Parent=gene-AD12_RS18925;Dbxref=GenBank:WP_000347664.1;Name=WP_000347664.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706451.2;locus_tag=AD12_RS18925;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347664.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 44022 44435 . + . ID=gene-AD12_RS18920;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AD12_RS18920;old_locus_tag=AD12_0716 NZ_JJLK01000050.1 Protein Homology CDS 44022 44435 . + 0 ID=cds-WP_000637953.1;Parent=gene-AD12_RS18920;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AD12_RS18920;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 44616 46721 . + . ID=gene-AD12_RS18915;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AD12_RS18915;old_locus_tag=AD12_0717 NZ_JJLK01000050.1 Protein Homology CDS 44616 46721 . + 0 ID=cds-WP_001043134.1;Parent=gene-AD12_RS18915;Dbxref=GenBank:WP_001043134.1;Name=WP_001043134.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AD12_RS18915;product=pyruvate/proton symporter CstA;protein_id=WP_001043134.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 46903 47100 . + . ID=gene-AD12_RS18910;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AD12_RS18910;old_locus_tag=AD12_0718 NZ_JJLK01000050.1 Protein Homology CDS 46903 47100 . + 0 ID=cds-WP_000460431.1;Parent=gene-AD12_RS18910;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AD12_RS18910;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 47110 48198 . - . ID=gene-AD12_RS18905;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AD12_RS18905;old_locus_tag=AD12_0719 NZ_JJLK01000050.1 Protein Homology CDS 47110 48198 . - 0 ID=cds-WP_001120432.1;Parent=gene-AD12_RS18905;Dbxref=GenBank:WP_001120432.1;Name=WP_001120432.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=AD12_RS18905;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120432.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 48307 49467 . + . ID=gene-AD12_RS18900;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AD12_RS18900;old_locus_tag=AD12_0720 NZ_JJLK01000050.1 Protein Homology CDS 48307 49467 . + 0 ID=cds-WP_000183939.1;Parent=gene-AD12_RS18900;Dbxref=GenBank:WP_000183939.1;Name=WP_000183939.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706456.1;locus_tag=AD12_RS18900;product=methionine-oxo-acid transaminase;protein_id=WP_000183939.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 49468 50097 . - . ID=gene-AD12_RS18895;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AD12_RS18895;old_locus_tag=AD12_0721 NZ_JJLK01000050.1 Protein Homology CDS 49468 50097 . - 0 ID=cds-WP_000502952.1;Parent=gene-AD12_RS18895;Dbxref=GenBank:WP_000502952.1;Name=WP_000502952.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308667.1;locus_tag=AD12_RS18895;product=IbrB-like domain-containing protein;protein_id=WP_000502952.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 50070 51290 . - . ID=gene-AD12_RS18890;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AD12_RS18890;old_locus_tag=AD12_0722 NZ_JJLK01000050.1 Protein Homology CDS 50070 51290 . - 0 ID=cds-WP_000029813.1;Parent=gene-AD12_RS18890;Dbxref=GenBank:WP_000029813.1;Name=WP_000029813.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308668.1;locus_tag=AD12_RS18890;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029813.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 51437 52339 . - . ID=gene-AD12_RS18885;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AD12_RS18885;old_locus_tag=AD12_0723 NZ_JJLK01000050.1 Protein Homology CDS 51437 52339 . - 0 ID=cds-WP_000002448.1;Parent=gene-AD12_RS18885;Dbxref=GenBank:WP_000002448.1;Name=WP_000002448.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AD12_RS18885;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002448.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 52548 53294 . - . ID=gene-AD12_RS18880;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AD12_RS18880;old_locus_tag=AD12_0725 NZ_JJLK01000050.1 Protein Homology CDS 52548 53294 . - 0 ID=cds-WP_000913829.1;Parent=gene-AD12_RS18880;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AD12_RS18880;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 53665 54228 . + . ID=gene-AD12_RS18875;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AD12_RS18875;old_locus_tag=AD12_0726 NZ_JJLK01000050.1 Protein Homology CDS 53665 54228 . + 0 ID=cds-WP_000052796.1;Parent=gene-AD12_RS18875;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AD12_RS18875;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 54399 55964 . + . ID=gene-AD12_RS18870;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AD12_RS18870;old_locus_tag=AD12_0728 NZ_JJLK01000050.1 Protein Homology CDS 54399 55964 . + 0 ID=cds-WP_000887629.1;Parent=gene-AD12_RS18870;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AD12_RS18870;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 56085 56513 . - . ID=gene-AD12_RS0123325;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AD12_RS0123325 NZ_JJLK01000050.1 Protein Homology CDS 56085 56513 . - 0 ID=cds-WP_000278505.1;Parent=gene-AD12_RS0123325;Dbxref=GenBank:WP_000278505.1;Name=WP_000278505.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308673.1;locus_tag=AD12_RS0123325;product=universal stress protein UspG;protein_id=WP_000278505.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 56734 57972 . + . ID=gene-AD12_RS18865;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AD12_RS18865;old_locus_tag=AD12_0730 NZ_JJLK01000050.1 Protein Homology CDS 56734 57972 . + 0 ID=cds-WP_000646150.1;Parent=gene-AD12_RS18865;Dbxref=GenBank:WP_000646150.1;Name=WP_000646150.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=AD12_RS18865;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646150.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 57976 58065 . - . ID=gene-AD12_RS29665;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AD12_RS29665;old_locus_tag=AD12_0731 NZ_JJLK01000050.1 Protein Homology CDS 57976 58065 . - 0 ID=cds-WP_000796528.1;Parent=gene-AD12_RS29665;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AD12_RS29665;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 58203 58613 . - . ID=gene-AD12_RS18855;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AD12_RS18855;old_locus_tag=AD12_0732 NZ_JJLK01000050.1 Protein Homology CDS 58203 58613 . - 0 ID=cds-WP_000089731.1;Parent=gene-AD12_RS18855;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AD12_RS18855;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 58843 59649 . - . ID=gene-AD12_RS18850;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AD12_RS18850;old_locus_tag=AD12_0733 NZ_JJLK01000050.1 Protein Homology CDS 58843 59649 . - 0 ID=cds-WP_001297277.1;Parent=gene-AD12_RS18850;Dbxref=GenBank:WP_001297277.1;Name=WP_001297277.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AD12_RS18850;product=ribonuclease I;protein_id=WP_001297277.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 59763 61226 . - . ID=gene-AD12_RS18845;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AD12_RS18845;old_locus_tag=AD12_0734 NZ_JJLK01000050.1 Protein Homology CDS 59763 61226 . - 0 ID=cds-WP_000050323.1;Parent=gene-AD12_RS18845;Dbxref=GenBank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AD12_RS18845;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 61277 62155 . - . ID=gene-AD12_RS18840;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AD12_RS18840;old_locus_tag=AD12_0735 NZ_JJLK01000050.1 Protein Homology CDS 61277 62155 . - 0 ID=cds-WP_024205008.1;Parent=gene-AD12_RS18840;Dbxref=GenBank:WP_024205008.1;Name=WP_024205008.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AD12_RS18840;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_024205008.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 62130 62681 . - . ID=gene-AD12_RS18835;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AD12_RS18835;old_locus_tag=AD12_0736 NZ_JJLK01000050.1 Protein Homology CDS 62130 62681 . - 0 ID=cds-WP_000550422.1;Parent=gene-AD12_RS18835;Dbxref=GenBank:WP_000550422.1;Name=WP_000550422.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AD12_RS18835;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550422.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 62685 64217 . - . ID=gene-AD12_RS18830;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AD12_RS18830;old_locus_tag=AD12_0737 NZ_JJLK01000050.1 Protein Homology CDS 62685 64217 . - 0 ID=cds-WP_000192245.1;Parent=gene-AD12_RS18830;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AD12_RS18830;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 64228 65136 . - . ID=gene-AD12_RS18825;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AD12_RS18825;old_locus_tag=AD12_0738 NZ_JJLK01000050.1 Protein Homology CDS 64228 65136 . - 0 ID=cds-WP_001432639.1;Parent=gene-AD12_RS18825;Dbxref=GenBank:WP_001432639.1;Name=WP_001432639.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AD12_RS18825;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001432639.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 65133 65429 . - . ID=gene-AD12_RS18820;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AD12_RS18820;old_locus_tag=AD12_0739 NZ_JJLK01000050.1 Protein Homology CDS 65133 65429 . - 0 ID=cds-WP_000700703.1;Parent=gene-AD12_RS18820;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AD12_RS18820;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 65444 66502 . - . ID=gene-AD12_RS18815;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AD12_RS18815;old_locus_tag=AD12_0740 NZ_JJLK01000050.1 Protein Homology CDS 65444 66502 . - 0 ID=cds-WP_000467705.1;Parent=gene-AD12_RS18815;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AD12_RS18815;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 66882 68540 . + . ID=gene-AD12_RS18810;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AD12_RS18810;old_locus_tag=AD12_0741 NZ_JJLK01000050.1 Protein Homology CDS 66882 68540 . + 0 ID=cds-WP_000939766.1;Parent=gene-AD12_RS18810;Dbxref=GenBank:WP_000939766.1;Name=WP_000939766.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308685.1;locus_tag=AD12_RS18810;product=sensor histidine kinase DpiB;protein_id=WP_000939766.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 68509 69189 . + . ID=gene-AD12_RS18805;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AD12_RS18805;old_locus_tag=AD12_0742 NZ_JJLK01000050.1 Protein Homology CDS 68509 69189 . + 0 ID=cds-WP_000126500.1;Parent=gene-AD12_RS18805;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AD12_RS18805;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 69230 70615 . - . ID=gene-AD12_RS18800;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD12_RS18800;old_locus_tag=AD12_0743 NZ_JJLK01000050.1 Protein Homology CDS 69230 70615 . - 0 ID=cds-WP_000955063.1;Parent=gene-AD12_RS18800;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AD12_RS18800;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 71204 71764 . + . ID=gene-AD12_RS18795;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AD12_RS18795;old_locus_tag=AD12_0744 NZ_JJLK01000050.1 Protein Homology CDS 71204 71764 . + 0 ID=cds-WP_001103094.1;Parent=gene-AD12_RS18795;Dbxref=GenBank:WP_001103094.1;Name=WP_001103094.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AD12_RS18795;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 71939 72148 . + . ID=gene-AD12_RS18790;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD12_RS18790;old_locus_tag=AD12_0745 NZ_JJLK01000050.1 Protein Homology CDS 71939 72148 . + 0 ID=cds-WP_000034825.1;Parent=gene-AD12_RS18790;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AD12_RS18790;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 72202 72585 . - . ID=gene-AD12_RS18785;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD12_RS18785;old_locus_tag=AD12_0746 NZ_JJLK01000050.1 Protein Homology CDS 72202 72585 . - 0 ID=cds-WP_000939749.1;Parent=gene-AD12_RS18785;Dbxref=GenBank:WP_000939749.1;Name=WP_000939749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AD12_RS18785;product=fluoride efflux transporter CrcB;protein_id=WP_000939749.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 72678 73466 . + . ID=gene-AD12_RS18780;Name=AD12_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18780;old_locus_tag=AD12_0747 NZ_JJLK01000050.1 Protein Homology CDS 72678 73466 . + 0 ID=cds-WP_000959109.1;Parent=gene-AD12_RS18780;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AD12_RS18780;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 73595 73798 . + . ID=gene-AD12_RS18775;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AD12_RS18775;old_locus_tag=AD12_0748 NZ_JJLK01000050.1 Protein Homology CDS 73595 73798 . + 0 ID=cds-WP_000503931.1;Parent=gene-AD12_RS18775;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AD12_RS18775;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 73899 74864 . - . ID=gene-AD12_RS18770;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AD12_RS18770;old_locus_tag=AD12_0749 NZ_JJLK01000050.1 Protein Homology CDS 73899 74864 . - 0 ID=cds-WP_000042622.1;Parent=gene-AD12_RS18770;Dbxref=GenBank:WP_000042622.1;Name=WP_000042622.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AD12_RS18770;product=lipoyl synthase;protein_id=WP_000042622.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 75073 76026 . - . ID=gene-AD12_RS18765;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AD12_RS18765;old_locus_tag=AD12_0750 NZ_JJLK01000050.1 Protein Homology CDS 75073 76026 . - 0 ID=cds-WP_000378026.1;Parent=gene-AD12_RS18765;Dbxref=GenBank:WP_000378026.1;Name=WP_000378026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AD12_RS18765;product=YbeF family transcriptional regulator;protein_id=WP_000378026.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 76285 76926 . - . ID=gene-AD12_RS18760;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AD12_RS18760;old_locus_tag=AD12_0751 NZ_JJLK01000050.1 Protein Homology CDS 76285 76926 . - 0 ID=cds-WP_000284027.1;Parent=gene-AD12_RS18760;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AD12_RS18760;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 77027 77290 . - . ID=gene-AD12_RS18755;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AD12_RS18755;old_locus_tag=AD12_0752 NZ_JJLK01000050.1 Protein Homology CDS 77027 77290 . - 0 ID=cds-WP_000850550.1;Parent=gene-AD12_RS18755;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AD12_RS18755;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 77401 78612 . - . ID=gene-AD12_RS18750;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AD12_RS18750;old_locus_tag=AD12_0753 NZ_JJLK01000050.1 Protein Homology CDS 77401 78612 . - 0 ID=cds-WP_032286358.1;Parent=gene-AD12_RS18750;Dbxref=GenBank:WP_032286358.1;Name=WP_032286358.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AD12_RS18750;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_032286358.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 78752 79840 . - . ID=gene-AD12_RS18745;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AD12_RS18745;old_locus_tag=AD12_0755 NZ_JJLK01000050.1 Protein Homology CDS 78752 79840 . - 0 ID=cds-WP_001231415.1;Parent=gene-AD12_RS18745;Dbxref=GenBank:WP_001231415.1;Name=WP_001231415.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AD12_RS18745;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231415.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 79851 80963 . - . ID=gene-AD12_RS18740;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AD12_RS18740;old_locus_tag=AD12_0756 NZ_JJLK01000050.1 Protein Homology CDS 79851 80963 . - 0 ID=cds-WP_000131719.1;Parent=gene-AD12_RS18740;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AD12_RS18740;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 80966 82867 . - . ID=gene-AD12_RS18735;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AD12_RS18735;old_locus_tag=AD12_0757 NZ_JJLK01000050.1 Protein Homology CDS 80966 82867 . - 0 ID=cds-WP_000776191.1;Parent=gene-AD12_RS18735;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AD12_RS18735;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 82898 83365 . - . ID=gene-AD12_RS18730;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AD12_RS18730;old_locus_tag=AD12_0758 NZ_JJLK01000050.1 Protein Homology CDS 82898 83365 . - 0 ID=cds-WP_000776104.1;Parent=gene-AD12_RS18730;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AD12_RS18730;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 83369 83686 . - . ID=gene-AD12_RS18725;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AD12_RS18725;old_locus_tag=AD12_0759 NZ_JJLK01000050.1 Protein Homology CDS 83369 83686 . - 0 ID=cds-WP_001161664.1;Parent=gene-AD12_RS18725;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AD12_RS18725;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 83946 84557 . - . ID=gene-AD12_RS18720;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AD12_RS18720;old_locus_tag=AD12_0760 NZ_JJLK01000050.1 Protein Homology CDS 83946 84557 . - 0 ID=cds-WP_001241899.1;Parent=gene-AD12_RS18720;Dbxref=GenBank:WP_001241899.1;Name=WP_001241899.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415171.1;locus_tag=AD12_RS18720;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241899.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 84581 85222 . - . ID=gene-AD12_RS18715;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AD12_RS18715;old_locus_tag=AD12_0761 NZ_JJLK01000050.1 Protein Homology CDS 84581 85222 . - 0 ID=cds-WP_000838889.1;Parent=gene-AD12_RS18715;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AD12_RS18715;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 85224 86255 . - . ID=gene-AD12_RS18710;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AD12_RS18710;old_locus_tag=AD12_0762 NZ_JJLK01000050.1 Protein Homology CDS 85224 86255 . - 0 ID=cds-WP_000620532.1;Parent=gene-AD12_RS18710;Dbxref=GenBank:WP_000620532.1;Name=WP_000620532.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AD12_RS18710;product=DNA polymerase III subunit delta;protein_id=WP_000620532.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 86255 86836 . - . ID=gene-AD12_RS18705;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AD12_RS18705;old_locus_tag=AD12_0763 NZ_JJLK01000050.1 Protein Homology CDS 86255 86836 . - 0 ID=cds-WP_001269673.1;Parent=gene-AD12_RS18705;Dbxref=GenBank:WP_001269673.1;Name=WP_001269673.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AD12_RS18705;product=LPS assembly lipoprotein LptE;protein_id=WP_001269673.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 86851 89433 . - . ID=gene-AD12_RS18700;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AD12_RS18700;old_locus_tag=AD12_0764 NZ_JJLK01000050.1 Protein Homology CDS 86851 89433 . - 0 ID=cds-WP_001157890.1;Parent=gene-AD12_RS18700;Dbxref=GenBank:WP_001157890.1;Name=WP_001157890.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AD12_RS18700;product=leucine--tRNA ligase;protein_id=WP_001157890.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 89668 90150 . + . ID=gene-AD12_RS18695;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AD12_RS18695;old_locus_tag=AD12_0765 NZ_JJLK01000050.1 Protein Homology CDS 89668 90150 . + 0 ID=cds-WP_001044880.1;Parent=gene-AD12_RS18695;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AD12_RS18695;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 90220 91197 . - . ID=gene-AD12_RS18690;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AD12_RS18690;old_locus_tag=AD12_0766 NZ_JJLK01000050.1 Protein Homology CDS 90220 91197 . - 0 ID=cds-WP_000578162.1;Parent=gene-AD12_RS18690;Dbxref=GenBank:WP_000578162.1;Name=WP_000578162.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AD12_RS18690;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578162.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 91361 92068 . + . ID=gene-AD12_RS18685;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AD12_RS18685;old_locus_tag=AD12_0768 NZ_JJLK01000050.1 Protein Homology CDS 91361 92068 . + 0 ID=cds-WP_000367023.1;Parent=gene-AD12_RS18685;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AD12_RS18685;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 92065 93492 . + . ID=gene-AD12_RS18680;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AD12_RS18680;old_locus_tag=AD12_0769 NZ_JJLK01000050.1 Protein Homology CDS 92065 93492 . + 0 ID=cds-WP_000786577.1;Parent=gene-AD12_RS18680;Dbxref=GenBank:WP_000786577.1;Name=WP_000786577.1;Ontology_term=GO:0006457;gbkey=CDS;gene=djlB;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AD12_RS18680;product=J domain-containing protein;protein_id=WP_000786577.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 93502 94056 . - . ID=gene-AD12_RS18675;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AD12_RS18675;old_locus_tag=AD12_0770 NZ_JJLK01000050.1 Protein Homology CDS 93502 94056 . - 0 ID=cds-WP_001035666.1;Parent=gene-AD12_RS18675;Dbxref=GenBank:WP_001035666.1;Name=WP_001035666.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AD12_RS18675;product=tetratricopeptide repeat protein;protein_id=WP_001035666.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 94158 94865 . + . ID=gene-AD12_RS18670;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AD12_RS18670;old_locus_tag=AD12_0771 NZ_JJLK01000050.1 Protein Homology CDS 94158 94865 . + 0 ID=cds-WP_001030930.1;Parent=gene-AD12_RS18670;Dbxref=GenBank:WP_001030930.1;Name=WP_001030930.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AD12_RS18670;product=DUF1266 domain-containing protein;protein_id=WP_001030930.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 94862 96313 . + . ID=gene-AD12_RS18665;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AD12_RS18665;old_locus_tag=AD12_0772 NZ_JJLK01000050.1 Protein Homology CDS 94862 96313 . + 0 ID=cds-WP_001326405.1;Parent=gene-AD12_RS18665;Dbxref=GenBank:WP_001326405.1;Name=WP_001326405.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706561.1;locus_tag=AD12_RS18665;product=co-chaperone DjlC;protein_id=WP_001326405.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 96373 98043 . - . ID=gene-AD12_RS18660;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AD12_RS18660;old_locus_tag=AD12_0773 NZ_JJLK01000050.1 Protein Homology CDS 96373 98043 . - 0 ID=cds-WP_000367857.1;Parent=gene-AD12_RS18660;Dbxref=GenBank:WP_000367857.1;Name=WP_000367857.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367910.1;locus_tag=AD12_RS18660;product=molecular chaperone HscC;protein_id=WP_000367857.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 98127 99062 . - . ID=gene-AD12_RS18655;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AD12_RS18655;old_locus_tag=AD12_0774 NZ_JJLK01000050.1 Protein Homology CDS 98127 99062 . - 0 ID=cds-WP_001207503.1;Parent=gene-AD12_RS18655;Dbxref=GenBank:WP_001207503.1;Name=WP_001207503.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308717.1;locus_tag=AD12_RS18655;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207503.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 99180 99905 . - . ID=gene-AD12_RS18650;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AD12_RS18650;old_locus_tag=AD12_0775 NZ_JJLK01000050.1 Protein Homology CDS 99180 99905 . - 0 ID=cds-WP_000631384.1;Parent=gene-AD12_RS18650;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AD12_RS18650;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 99905 100579 . - . ID=gene-AD12_RS18645;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AD12_RS18645;old_locus_tag=AD12_0776 NZ_JJLK01000050.1 Protein Homology CDS 99905 100579 . - 0 ID=cds-WP_000272824.1;Parent=gene-AD12_RS18645;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AD12_RS18645;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 100579 101319 . - . ID=gene-AD12_RS18640;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AD12_RS18640;old_locus_tag=AD12_0777 NZ_JJLK01000050.1 Protein Homology CDS 100579 101319 . - 0 ID=cds-WP_000020941.1;Parent=gene-AD12_RS18640;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AD12_RS18640;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 101489 102397 . - . ID=gene-AD12_RS18635;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AD12_RS18635;old_locus_tag=AD12_0778 NZ_JJLK01000050.1 Protein Homology CDS 101489 102397 . - 0 ID=cds-WP_001297566.1;Parent=gene-AD12_RS18635;Dbxref=GenBank:WP_001297566.1;Name=WP_001297566.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=AD12_RS18635;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001297566.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 102852 104729 . + . ID=gene-AD12_RS18630;Name=AD12_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18630;old_locus_tag=AD12_0780 NZ_JJLK01000050.1 Protein Homology CDS 102852 104729 . + 0 ID=cds-WP_001276717.1;Parent=gene-AD12_RS18630;Dbxref=GenBank:WP_001276717.1;Name=WP_001276717.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276742.1;locus_tag=AD12_RS18630;product=rhomboid family intramembrane serine protease;protein_id=WP_001276717.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 104807 106345 . - . ID=gene-AD12_RS18625;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AD12_RS18625;old_locus_tag=AD12_0781 NZ_JJLK01000050.1 Protein Homology CDS 104807 106345 . - 0 ID=cds-WP_000853051.1;Parent=gene-AD12_RS18625;Dbxref=GenBank:WP_000853051.1;Name=WP_000853051.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AD12_RS18625;product=apolipoprotein N-acyltransferase;protein_id=WP_000853051.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 106370 107248 . - . ID=gene-AD12_RS18620;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AD12_RS18620;old_locus_tag=AD12_0782 NZ_JJLK01000050.1 Protein Homology CDS 106370 107248 . - 0 ID=cds-WP_001278605.1;Parent=gene-AD12_RS18620;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AD12_RS18620;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 107338 107805 . - . ID=gene-AD12_RS18615;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AD12_RS18615;old_locus_tag=AD12_0783 NZ_JJLK01000050.1 Protein Homology CDS 107338 107805 . - 0 ID=cds-WP_000084473.1;Parent=gene-AD12_RS18615;Dbxref=GenBank:WP_000084473.1;Name=WP_000084473.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AD12_RS18615;product=rRNA maturation RNase YbeY;protein_id=WP_000084473.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 107802 108842 . - . ID=gene-AD12_RS18610;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AD12_RS18610;old_locus_tag=AD12_0784 NZ_JJLK01000050.1 Protein Homology CDS 107802 108842 . - 0 ID=cds-WP_001018040.1;Parent=gene-AD12_RS18610;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AD12_RS18610;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 108995 110419 . - . ID=gene-AD12_RS18605;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AD12_RS18605;old_locus_tag=AD12_0786 NZ_JJLK01000050.1 Protein Homology CDS 108995 110419 . - 0 ID=cds-WP_000162740.1;Parent=gene-AD12_RS18605;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AD12_RS18605;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 110565 111740 . + . ID=gene-AD12_RS18600;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD12_RS18600;old_locus_tag=AD12_0787 NZ_JJLK01000050.1 Protein Homology CDS 110565 111740 . + 0 ID=cds-WP_000184648.1;Parent=gene-AD12_RS18600;Dbxref=GenBank:WP_000184648.1;Name=WP_000184648.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD12_RS18600;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184648.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 111894 111968 . - . ID=gene-AD12_RS18595;Name=AD12_RS18595;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18595;old_locus_tag=AD12_0788 NZ_JJLK01000050.1 tRNAscan-SE tRNA 111894 111968 . - . ID=rna-AD12_RS18595;Parent=gene-AD12_RS18595;anticodon=(pos:complement(111934..111936));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18595;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 111894 111968 . - . ID=exon-AD12_RS18595-1;Parent=rna-AD12_RS18595;anticodon=(pos:complement(111934..111936));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18595;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112006 112080 . - . ID=gene-AD12_RS18590;Name=AD12_RS18590;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18590;old_locus_tag=AD12_0789 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112006 112080 . - . ID=rna-AD12_RS18590;Parent=gene-AD12_RS18590;anticodon=(pos:complement(112046..112048));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18590;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112006 112080 . - . ID=exon-AD12_RS18590-1;Parent=rna-AD12_RS18590;anticodon=(pos:complement(112046..112048));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18590;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112118 112192 . - . ID=gene-AD12_RS18585;Name=AD12_RS18585;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18585;old_locus_tag=AD12_0790 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112118 112192 . - . ID=rna-AD12_RS18585;Parent=gene-AD12_RS18585;anticodon=(pos:complement(112158..112160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18585;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112118 112192 . - . ID=exon-AD12_RS18585-1;Parent=rna-AD12_RS18585;anticodon=(pos:complement(112158..112160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18585;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112230 112304 . - . ID=gene-AD12_RS18580;Name=AD12_RS18580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18580;old_locus_tag=AD12_0791 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112230 112304 . - . ID=rna-AD12_RS18580;Parent=gene-AD12_RS18580;anticodon=(pos:complement(112270..112272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18580;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112230 112304 . - . ID=exon-AD12_RS18580-1;Parent=rna-AD12_RS18580;anticodon=(pos:complement(112270..112272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18580;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112353 112429 . - . ID=gene-AD12_RS18575;Name=AD12_RS18575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18575;old_locus_tag=AD12_0792 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112353 112429 . - . ID=rna-AD12_RS18575;Parent=gene-AD12_RS18575;anticodon=(pos:complement(112393..112395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18575;product=tRNA-Met NZ_JJLK01000050.1 tRNAscan-SE exon 112353 112429 . - . ID=exon-AD12_RS18575-1;Parent=rna-AD12_RS18575;anticodon=(pos:complement(112393..112395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18575;product=tRNA-Met NZ_JJLK01000050.1 RefSeq gene 112445 112519 . - . ID=gene-AD12_RS18570;Name=AD12_RS18570;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18570;old_locus_tag=AD12_0793 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112445 112519 . - . ID=rna-AD12_RS18570;Parent=gene-AD12_RS18570;anticodon=(pos:complement(112485..112487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18570;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112445 112519 . - . ID=exon-AD12_RS18570-1;Parent=rna-AD12_RS18570;anticodon=(pos:complement(112485..112487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18570;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112554 112628 . - . ID=gene-AD12_RS18565;Name=AD12_RS18565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18565;old_locus_tag=AD12_0794 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112554 112628 . - . ID=rna-AD12_RS18565;Parent=gene-AD12_RS18565;anticodon=(pos:complement(112594..112596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18565;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112554 112628 . - . ID=exon-AD12_RS18565-1;Parent=rna-AD12_RS18565;anticodon=(pos:complement(112594..112596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18565;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112663 112737 . - . ID=gene-AD12_RS18560;Name=AD12_RS18560;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18560;old_locus_tag=AD12_0795 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112663 112737 . - . ID=rna-AD12_RS18560;Parent=gene-AD12_RS18560;anticodon=(pos:complement(112703..112705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18560;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112663 112737 . - . ID=exon-AD12_RS18560-1;Parent=rna-AD12_RS18560;anticodon=(pos:complement(112703..112705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18560;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112772 112846 . - . ID=gene-AD12_RS18555;Name=AD12_RS18555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18555;old_locus_tag=AD12_0796 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112772 112846 . - . ID=rna-AD12_RS18555;Parent=gene-AD12_RS18555;anticodon=(pos:complement(112812..112814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18555;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 112772 112846 . - . ID=exon-AD12_RS18555-1;Parent=rna-AD12_RS18555;anticodon=(pos:complement(112812..112814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18555;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 112870 112954 . - . ID=gene-AD12_RS18550;Name=AD12_RS18550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18550;old_locus_tag=AD12_0797 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112870 112954 . - . ID=rna-AD12_RS18550;Parent=gene-AD12_RS18550;anticodon=(pos:complement(112918..112920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18550;product=tRNA-Leu NZ_JJLK01000050.1 tRNAscan-SE exon 112870 112954 . - . ID=exon-AD12_RS18550-1;Parent=rna-AD12_RS18550;anticodon=(pos:complement(112918..112920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18550;product=tRNA-Leu NZ_JJLK01000050.1 RefSeq gene 112963 113039 . - . ID=gene-AD12_RS18545;Name=AD12_RS18545;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18545;old_locus_tag=AD12_0798 NZ_JJLK01000050.1 tRNAscan-SE tRNA 112963 113039 . - . ID=rna-AD12_RS18545;Parent=gene-AD12_RS18545;anticodon=(pos:complement(113003..113005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18545;product=tRNA-Met NZ_JJLK01000050.1 tRNAscan-SE exon 112963 113039 . - . ID=exon-AD12_RS18545-1;Parent=rna-AD12_RS18545;anticodon=(pos:complement(113003..113005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18545;product=tRNA-Met NZ_JJLK01000050.1 RefSeq gene 113055 113129 . - . ID=gene-AD12_RS18540;Name=AD12_RS18540;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18540;old_locus_tag=AD12_0799 NZ_JJLK01000050.1 tRNAscan-SE tRNA 113055 113129 . - . ID=rna-AD12_RS18540;Parent=gene-AD12_RS18540;anticodon=(pos:complement(113095..113097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18540;product=tRNA-Gln NZ_JJLK01000050.1 tRNAscan-SE exon 113055 113129 . - . ID=exon-AD12_RS18540-1;Parent=rna-AD12_RS18540;anticodon=(pos:complement(113095..113097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18540;product=tRNA-Gln NZ_JJLK01000050.1 RefSeq gene 113153 113237 . - . ID=gene-AD12_RS18535;Name=AD12_RS18535;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18535;old_locus_tag=AD12_0800 NZ_JJLK01000050.1 tRNAscan-SE tRNA 113153 113237 . - . ID=rna-AD12_RS18535;Parent=gene-AD12_RS18535;anticodon=(pos:complement(113201..113203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18535;product=tRNA-Leu NZ_JJLK01000050.1 tRNAscan-SE exon 113153 113237 . - . ID=exon-AD12_RS18535-1;Parent=rna-AD12_RS18535;anticodon=(pos:complement(113201..113203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18535;product=tRNA-Leu NZ_JJLK01000050.1 RefSeq gene 113246 113322 . - . ID=gene-AD12_RS18530;Name=AD12_RS18530;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18530;old_locus_tag=AD12_0801 NZ_JJLK01000050.1 tRNAscan-SE tRNA 113246 113322 . - . ID=rna-AD12_RS18530;Parent=gene-AD12_RS18530;anticodon=(pos:complement(113286..113288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18530;product=tRNA-Met NZ_JJLK01000050.1 tRNAscan-SE exon 113246 113322 . - . ID=exon-AD12_RS18530-1;Parent=rna-AD12_RS18530;anticodon=(pos:complement(113286..113288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18530;product=tRNA-Met NZ_JJLK01000050.1 RefSeq gene 113701 115365 . - . ID=gene-AD12_RS18525;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AD12_RS18525;old_locus_tag=AD12_0802 NZ_JJLK01000050.1 Protein Homology CDS 113701 115365 . - 0 ID=cds-WP_000337078.1;Parent=gene-AD12_RS18525;Dbxref=GenBank:WP_000337078.1;Name=WP_000337078.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AD12_RS18525;product=asparagine synthase B;protein_id=WP_000337078.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 115762 116514 . - . ID=gene-AD12_RS18520;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AD12_RS18520;old_locus_tag=AD12_0804 NZ_JJLK01000050.1 Protein Homology CDS 115762 116514 . - 0 ID=cds-WP_000153129.1;Parent=gene-AD12_RS18520;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AD12_RS18520;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 116562 117782 . - . ID=gene-AD12_RS18515;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AD12_RS18515;old_locus_tag=AD12_0805 NZ_JJLK01000050.1 Protein Homology CDS 116562 117782 . - 0 ID=cds-WP_000187594.1;Parent=gene-AD12_RS18515;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AD12_RS18515;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 117791 118939 . - . ID=gene-AD12_RS18510;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD12_RS18510;old_locus_tag=AD12_0806 NZ_JJLK01000050.1 Protein Homology CDS 117791 118939 . - 0 ID=cds-WP_032197363.1;Parent=gene-AD12_RS18510;Dbxref=GenBank:WP_032197363.1;Name=WP_032197363.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AD12_RS18510;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032197363.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 118999 119799 . - . ID=gene-AD12_RS18505;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AD12_RS18505;old_locus_tag=AD12_0807 NZ_JJLK01000050.1 Protein Homology CDS 118999 119799 . - 0 ID=cds-WP_001237072.1;Parent=gene-AD12_RS18505;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AD12_RS18505;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 120132 122078 . + . ID=gene-AD12_RS18500;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AD12_RS18500;old_locus_tag=AD12_0809 NZ_JJLK01000050.1 Protein Homology CDS 120132 122078 . + 0 ID=cds-WP_001023123.1;Parent=gene-AD12_RS18500;Dbxref=GenBank:WP_001023123.1;Name=WP_001023123.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AD12_RS18500;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023123.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 122346 124010 . + . ID=gene-AD12_RS18495;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AD12_RS18495;old_locus_tag=AD12_0811 NZ_JJLK01000050.1 Protein Homology CDS 122346 124010 . + 0 ID=cds-WP_001287154.1;Parent=gene-AD12_RS18495;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AD12_RS18495;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 124590 125996 . + . ID=gene-AD12_RS18490;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AD12_RS18490;old_locus_tag=AD12_0812 NZ_JJLK01000050.1 Protein Homology CDS 124590 125996 . + 0 ID=cds-WP_001258839.1;Parent=gene-AD12_RS18490;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AD12_RS18490;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 126046 126372 . + . ID=gene-AD12_RS18485;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AD12_RS18485;old_locus_tag=AD12_0813 NZ_JJLK01000050.1 Protein Homology CDS 126046 126372 . + 0 ID=cds-WP_000733588.1;Parent=gene-AD12_RS18485;Dbxref=GenBank:WP_000733588.1;Name=WP_000733588.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AD12_RS18485;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733588.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 126457 126903 . - . ID=gene-AD12_RS18480;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AD12_RS18480;old_locus_tag=AD12_0814 NZ_JJLK01000050.1 Protein Homology CDS 126457 126903 . - 0 ID=cds-WP_000131702.1;Parent=gene-AD12_RS18480;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AD12_RS18480;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 126896 126982 . - . ID=gene-AD12_RS0123340;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AD12_RS0123340 NZ_JJLK01000050.1 Protein Homology CDS 126896 126982 . - 0 ID=cds-WP_001406816.1;Parent=gene-AD12_RS0123340;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AD12_RS0123340;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 127192 127722 . - . ID=gene-AD12_RS18475;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AD12_RS18475;old_locus_tag=AD12_0815 NZ_JJLK01000050.1 Protein Homology CDS 127192 127722 . - 0 ID=cds-WP_001018618.1;Parent=gene-AD12_RS18475;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AD12_RS18475;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 127862 128155 . - . ID=gene-AD12_RS18470;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AD12_RS18470;old_locus_tag=AD12_0816 NZ_JJLK01000050.1 Protein Homology CDS 127862 128155 . - 0 ID=cds-WP_001300829.1;Parent=gene-AD12_RS18470;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AD12_RS18470;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 128295 129059 . - . ID=gene-AD12_RS18465;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AD12_RS18465;old_locus_tag=AD12_0817 NZ_JJLK01000050.1 Protein Homology CDS 128295 129059 . - 0 ID=cds-WP_000773301.1;Parent=gene-AD12_RS18465;Dbxref=GenBank:WP_000773301.1;Name=WP_000773301.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AD12_RS18465;product=esterase;protein_id=WP_000773301.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 129244 129789 . + . ID=gene-AD12_RS18460;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AD12_RS18460;old_locus_tag=AD12_0818 NZ_JJLK01000050.1 Protein Homology CDS 129244 129789 . + 0 ID=cds-WP_000848387.1;Parent=gene-AD12_RS18460;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AD12_RS18460;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 129815 131455 . + . ID=gene-AD12_RS18455;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AD12_RS18455;old_locus_tag=AD12_0819 NZ_JJLK01000050.1 Protein Homology CDS 129815 131455 . + 0 ID=cds-WP_000974363.1;Parent=gene-AD12_RS18455;Dbxref=GenBank:WP_000974363.1;Name=WP_000974363.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308746.1;locus_tag=AD12_RS18455;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974363.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 131511 132830 . - . ID=gene-AD12_RS18450;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AD12_RS18450;old_locus_tag=AD12_0820 NZ_JJLK01000050.1 Protein Homology CDS 131511 132830 . - 0 ID=cds-WP_000075845.1;Parent=gene-AD12_RS18450;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AD12_RS18450;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 132827 135025 . - . ID=gene-AD12_RS18445;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AD12_RS18445;old_locus_tag=AD12_0821 NZ_JJLK01000050.1 Protein Homology CDS 132827 135025 . - 0 ID=cds-WP_001372249.1;Parent=gene-AD12_RS18445;Dbxref=GenBank:WP_001372249.1;Name=WP_001372249.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=AD12_RS18445;product=ornithine decarboxylase SpeF;protein_id=WP_001372249.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 135336 135440 . - . ID=gene-AD12_RS28580;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AD12_RS28580 NZ_JJLK01000050.1 Protein Homology CDS 135336 135440 . - 0 ID=cds-WP_001312672.1;Parent=gene-AD12_RS28580;Dbxref=GenBank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AD12_RS28580;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 135419 135553 . - . ID=gene-AD12_RS29790;Name=AD12_RS29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29790 NZ_JJLK01000050.1 Protein Homology CDS 135419 135553 . - 0 ID=cds-WP_001299172.1;Parent=gene-AD12_RS29790;Dbxref=GenBank:WP_001299172.1;Name=WP_001299172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417766.1;locus_tag=AD12_RS29790;product=hypothetical protein;protein_id=WP_001299172.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 135715 136392 . - . ID=gene-AD12_RS18435;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AD12_RS18435;old_locus_tag=AD12_0823 NZ_JJLK01000050.1 Protein Homology CDS 135715 136392 . - 0 ID=cds-WP_000186103.1;Parent=gene-AD12_RS18435;Dbxref=GenBank:WP_000186103.1;Name=WP_000186103.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=AD12_RS18435;product=two-component system response regulator KdpE;protein_id=WP_000186103.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 136389 139073 . - . ID=gene-AD12_RS18430;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AD12_RS18430;old_locus_tag=AD12_0824 NZ_JJLK01000050.1 Protein Homology CDS 136389 139073 . - 0 ID=cds-WP_010791450.1;Parent=gene-AD12_RS18430;Dbxref=GenBank:WP_010791450.1;Name=WP_010791450.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308750.1;locus_tag=AD12_RS18430;product=two-component system sensor histidine kinase KdpD;protein_id=WP_010791450.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 139066 139638 . - . ID=gene-AD12_RS18425;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AD12_RS18425;old_locus_tag=AD12_0825 NZ_JJLK01000050.1 Protein Homology CDS 139066 139638 . - 0 ID=cds-WP_001324645.1;Parent=gene-AD12_RS18425;Dbxref=GenBank:WP_001324645.1;Name=WP_001324645.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AD12_RS18425;product=K(+)-transporting ATPase subunit C;protein_id=WP_001324645.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 139647 141695 . - . ID=gene-AD12_RS18420;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AD12_RS18420;old_locus_tag=AD12_0826 NZ_JJLK01000050.1 Protein Homology CDS 139647 141695 . - 0 ID=cds-WP_000087966.1;Parent=gene-AD12_RS18420;Dbxref=GenBank:WP_000087966.1;Name=WP_000087966.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AD12_RS18420;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087966.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 141718 143391 . - . ID=gene-AD12_RS18415;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AD12_RS18415;old_locus_tag=AD12_0827 NZ_JJLK01000050.1 Protein Homology CDS 141718 143391 . - 0 ID=cds-WP_032286359.1;Parent=gene-AD12_RS18415;Dbxref=GenBank:WP_032286359.1;Name=WP_032286359.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AD12_RS18415;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_032286359.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 143391 143480 . - . ID=gene-AD12_RS0123350;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AD12_RS0123350 NZ_JJLK01000050.1 Protein Homology CDS 143391 143480 . - 0 ID=cds-WP_001272653.1;Parent=gene-AD12_RS0123350;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AD12_RS0123350;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 143793 143999 . + . ID=gene-AD12_RS18410;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AD12_RS18410;old_locus_tag=AD12_0829 NZ_JJLK01000050.1 Protein Homology CDS 143793 143999 . + 0 ID=cds-WP_000424924.1;Parent=gene-AD12_RS18410;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AD12_RS18410;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JJLK01000050.1 RefSeq gene 144242 144513 . + . ID=gene-AD12_RS18405;Name=AD12_RS18405;end_range=144513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18405;old_locus_tag=AD12_0830;partial=true NZ_JJLK01000050.1 Protein Homology CDS 144242 144513 . + 0 ID=cds-WP_032286360.1;Parent=gene-AD12_RS18405;Dbxref=GenBank:WP_032286360.1;Name=WP_032286360.1;end_range=144513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD12_RS18405;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032286360.1;transl_table=11 ##sequence-region NZ_JJLK01000051.1 1 1753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000051.1 RefSeq region 1 1753 . + . ID=NZ_JJLK01000051.1:1..1753;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000051.1 RefSeq gene 116 192 . - . ID=gene-AD12_RS18395;Name=AD12_RS18395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18395;old_locus_tag=AD12_0832 NZ_JJLK01000051.1 tRNAscan-SE tRNA 116 192 . - . ID=rna-AD12_RS18395;Parent=gene-AD12_RS18395;anticodon=(pos:complement(156..158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18395;product=tRNA-Met NZ_JJLK01000051.1 tRNAscan-SE exon 116 192 . - . ID=exon-AD12_RS18395-1;Parent=rna-AD12_RS18395;anticodon=(pos:complement(156..158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18395;product=tRNA-Met NZ_JJLK01000051.1 RefSeq gene 208 282 . - . ID=gene-AD12_RS18390;Name=AD12_RS18390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18390;old_locus_tag=AD12_0833 NZ_JJLK01000051.1 tRNAscan-SE tRNA 208 282 . - . ID=rna-AD12_RS18390;Parent=gene-AD12_RS18390;anticodon=(pos:complement(248..250));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18390;product=tRNA-Gln NZ_JJLK01000051.1 tRNAscan-SE exon 208 282 . - . ID=exon-AD12_RS18390-1;Parent=rna-AD12_RS18390;anticodon=(pos:complement(248..250));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18390;product=tRNA-Gln NZ_JJLK01000051.1 RefSeq gene 306 390 . - . ID=gene-AD12_RS18385;Name=AD12_RS18385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18385;old_locus_tag=AD12_0834 NZ_JJLK01000051.1 tRNAscan-SE tRNA 306 390 . - . ID=rna-AD12_RS18385;Parent=gene-AD12_RS18385;anticodon=(pos:complement(354..356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18385;product=tRNA-Leu NZ_JJLK01000051.1 tRNAscan-SE exon 306 390 . - . ID=exon-AD12_RS18385-1;Parent=rna-AD12_RS18385;anticodon=(pos:complement(354..356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18385;product=tRNA-Leu NZ_JJLK01000051.1 RefSeq gene 399 475 . - . ID=gene-AD12_RS18380;Name=AD12_RS18380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18380;old_locus_tag=AD12_0835 NZ_JJLK01000051.1 tRNAscan-SE tRNA 399 475 . - . ID=rna-AD12_RS18380;Parent=gene-AD12_RS18380;anticodon=(pos:complement(439..441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18380;product=tRNA-Met NZ_JJLK01000051.1 tRNAscan-SE exon 399 475 . - . ID=exon-AD12_RS18380-1;Parent=rna-AD12_RS18380;anticodon=(pos:complement(439..441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18380;product=tRNA-Met NZ_JJLK01000051.1 RefSeq gene 491 565 . - . ID=gene-AD12_RS18375;Name=AD12_RS18375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18375;old_locus_tag=AD12_0836 NZ_JJLK01000051.1 tRNAscan-SE tRNA 491 565 . - . ID=rna-AD12_RS18375;Parent=gene-AD12_RS18375;anticodon=(pos:complement(531..533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18375;product=tRNA-Gln NZ_JJLK01000051.1 tRNAscan-SE exon 491 565 . - . ID=exon-AD12_RS18375-1;Parent=rna-AD12_RS18375;anticodon=(pos:complement(531..533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18375;product=tRNA-Gln NZ_JJLK01000051.1 RefSeq gene 600 674 . - . ID=gene-AD12_RS18370;Name=AD12_RS18370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18370;old_locus_tag=AD12_0837 NZ_JJLK01000051.1 tRNAscan-SE tRNA 600 674 . - . ID=rna-AD12_RS18370;Parent=gene-AD12_RS18370;anticodon=(pos:complement(640..642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18370;product=tRNA-Gln NZ_JJLK01000051.1 tRNAscan-SE exon 600 674 . - . ID=exon-AD12_RS18370-1;Parent=rna-AD12_RS18370;anticodon=(pos:complement(640..642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18370;product=tRNA-Gln NZ_JJLK01000051.1 RefSeq gene 698 782 . - . ID=gene-AD12_RS18365;Name=AD12_RS18365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18365;old_locus_tag=AD12_0838 NZ_JJLK01000051.1 tRNAscan-SE tRNA 698 782 . - . ID=rna-AD12_RS18365;Parent=gene-AD12_RS18365;anticodon=(pos:complement(746..748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18365;product=tRNA-Leu NZ_JJLK01000051.1 tRNAscan-SE exon 698 782 . - . ID=exon-AD12_RS18365-1;Parent=rna-AD12_RS18365;anticodon=(pos:complement(746..748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18365;product=tRNA-Leu NZ_JJLK01000051.1 RefSeq gene 791 867 . - . ID=gene-AD12_RS18360;Name=AD12_RS18360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18360;old_locus_tag=AD12_0839 NZ_JJLK01000051.1 tRNAscan-SE tRNA 791 867 . - . ID=rna-AD12_RS18360;Parent=gene-AD12_RS18360;anticodon=(pos:complement(831..833));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18360;product=tRNA-Met NZ_JJLK01000051.1 tRNAscan-SE exon 791 867 . - . ID=exon-AD12_RS18360-1;Parent=rna-AD12_RS18360;anticodon=(pos:complement(831..833));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18360;product=tRNA-Met NZ_JJLK01000051.1 RefSeq gene 1246 1753 . - . ID=gene-AD12_RS18355;Name=AD12_RS18355;end_range=1753,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18355;old_locus_tag=AD12_0840;partial=true NZ_JJLK01000051.1 Protein Homology CDS 1246 1753 . - 1 ID=cds-WP_032286361.1;Parent=gene-AD12_RS18355;Dbxref=GenBank:WP_032286361.1;Name=WP_032286361.1;Ontology_term=GO:0006529,GO:0004066;end_range=1753,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AD12_RS18355;partial=true;product=asparagine synthase-related protein;protein_id=WP_032286361.1;transl_table=11 ##sequence-region NZ_JJLK01000052.1 1 13258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000052.1 RefSeq region 1 13258 . + . ID=NZ_JJLK01000052.1:1..13258;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000052.1 RefSeq gene 1 718 . + . ID=gene-AD12_RS18350;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=AD12_RS18350;old_locus_tag=AD12_0841;partial=true;start_range=.,1 NZ_JJLK01000052.1 Protein Homology CDS 1 718 . + 1 ID=cds-WP_032177965.1;Parent=gene-AD12_RS18350;Dbxref=GenBank:WP_032177965.1;Name=WP_032177965.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491457.1;locus_tag=AD12_RS18350;partial=true;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_032177965.1;start_range=.,1;transl_table=11 NZ_JJLK01000052.1 RefSeq pseudogene 952 1200 . - . ID=gene-AD12_RS27890;Name=AD12_RS27890;end_range=1200,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27890;partial=true;pseudo=true NZ_JJLK01000052.1 Protein Homology CDS 952 1200 . - 0 ID=cds-AD12_RS27890;Parent=gene-AD12_RS27890;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1200,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=AD12_RS27890;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000052.1 RefSeq pseudogene 1207 1620 . + . ID=gene-AD12_RS18345;Name=AD12_RS18345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS18345;old_locus_tag=AD12_0842;partial=true;pseudo=true;start_range=.,1207 NZ_JJLK01000052.1 Protein Homology CDS 1207 1620 . + 0 ID=cds-AD12_RS18345;Parent=gene-AD12_RS18345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377870.1;locus_tag=AD12_RS18345;partial=true;product=phosphopyruvate hydratase;pseudo=true;start_range=.,1207;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 1961 2341 . + . ID=gene-AD12_RS0123360;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD12_RS0123360 NZ_JJLK01000052.1 Protein Homology CDS 1961 2341 . + 0 ID=cds-WP_001318207.1;Parent=gene-AD12_RS0123360;Dbxref=GenBank:WP_001318207.1;Name=WP_001318207.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318207.1;locus_tag=AD12_RS0123360;product=fluoride efflux transporter CrcB;protein_id=WP_001318207.1;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 2721 3914 . - . ID=gene-AD12_RS18340;Name=AD12_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18340;old_locus_tag=AD12_0843 NZ_JJLK01000052.1 Protein Homology CDS 2721 3914 . - 0 ID=cds-WP_000095526.1;Parent=gene-AD12_RS18340;Dbxref=GenBank:WP_000095526.1;Name=WP_000095526.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AD12_RS18340;product=MFS transporter;protein_id=WP_000095526.1;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 4050 5774 . + . ID=gene-AD12_RS18335;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AD12_RS18335;old_locus_tag=AD12_0844 NZ_JJLK01000052.1 Protein Homology CDS 4050 5774 . + 0 ID=cds-WP_000602863.1;Parent=gene-AD12_RS18335;Dbxref=GenBank:WP_000602863.1;Name=WP_000602863.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AD12_RS18335;product=aerobactin synthase IucA;protein_id=WP_000602863.1;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 5775 6722 . + . ID=gene-AD12_RS18330;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AD12_RS18330;old_locus_tag=AD12_0845 NZ_JJLK01000052.1 Protein Homology CDS 5775 6722 . + 0 ID=cds-WP_000011907.1;Parent=gene-AD12_RS18330;Dbxref=GenBank:WP_000011907.1;Name=WP_000011907.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AD12_RS18330;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_000011907.1;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 6722 8464 . + . ID=gene-AD12_RS18325;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AD12_RS18325;old_locus_tag=AD12_0846 NZ_JJLK01000052.1 Protein Homology CDS 6722 8464 . + 0 ID=cds-WP_001015721.1;Parent=gene-AD12_RS18325;Dbxref=GenBank:WP_001015721.1;Name=WP_001015721.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AD12_RS18325;product=NIS family aerobactin synthetase IucC;protein_id=WP_001015721.1;transl_table=11 NZ_JJLK01000052.1 RefSeq pseudogene 8461 9794 . + . ID=gene-AD12_RS18320;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=pseudogene;locus_tag=AD12_RS18320;old_locus_tag=AD12_0847;pseudo=true NZ_JJLK01000052.1 Protein Homology CDS 8461 9794 . + 0 ID=cds-AD12_RS18320;Parent=gene-AD12_RS18320;Note=frameshifted;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528830.1;locus_tag=AD12_RS18320;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;pseudo=true;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 9820 12021 . + . ID=gene-AD12_RS18315;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AD12_RS18315;old_locus_tag=AD12_0848 NZ_JJLK01000052.1 Protein Homology CDS 9820 12021 . + 0 ID=cds-WP_000973517.1;Parent=gene-AD12_RS18315;Dbxref=GenBank:WP_000973517.1;Name=WP_000973517.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213924.1;locus_tag=AD12_RS18315;product=ferric aerobactin receptor IutA;protein_id=WP_000973517.1;transl_table=11 NZ_JJLK01000052.1 RefSeq gene 12546 13243 . + . ID=gene-AD12_RS0123365;Name=AD12_RS0123365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123365 NZ_JJLK01000052.1 Protein Homology CDS 12546 12795 . + 0 ID=cds-WP_094096600.1;Parent=gene-AD12_RS0123365;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS0123365;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JJLK01000052.1 Protein Homology CDS 12795 13243 . + 2 ID=cds-WP_094096600.1;Parent=gene-AD12_RS0123365;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS0123365;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JJLK01000053.1 1 1575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000053.1 RefSeq region 1 1575 . + . ID=NZ_JJLK01000053.1:1..1575;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000053.1 RefSeq pseudogene 1 1575 . + . ID=gene-AD12_RS18305;Name=rhsC;end_range=1575,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AD12_RS18305;old_locus_tag=AD12_0851;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000053.1 Protein Homology CDS 1 1575 . + 1 ID=cds-AD12_RS18305;Parent=gene-AD12_RS18305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1575,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD12_RS18305;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000054.1 1 372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000054.1 RefSeq region 1 372 . + . ID=NZ_JJLK01000054.1:1..372;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000054.1 RefSeq pseudogene 56 372 . + . ID=gene-AD12_RS0123370;Name=AD12_RS0123370;end_range=372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123370;partial=true;pseudo=true NZ_JJLK01000054.1 Protein Homology CDS 56 372 . + 0 ID=cds-AD12_RS0123370;Parent=gene-AD12_RS0123370;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=372,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS0123370;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000055.1 1 150905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000055.1 RefSeq region 1 150905 . + . ID=NZ_JJLK01000055.1:1..150905;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000055.1 RefSeq pseudogene 1 213 . + . ID=gene-AD12_RS26335;Name=AD12_RS26335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS26335;old_locus_tag=AD12_0853;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000055.1 Protein Homology CDS 1 213 . + 0 ID=cds-AD12_RS26335;Parent=gene-AD12_RS26335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS26335;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 640 1149 . + . ID=gene-AD12_RS18295;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AD12_RS18295;old_locus_tag=AD12_0855 NZ_JJLK01000055.1 Protein Homology CDS 640 1149 . + 0 ID=cds-WP_001053305.1;Parent=gene-AD12_RS18295;Dbxref=GenBank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AD12_RS18295;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 1146 2564 . + . ID=gene-AD12_RS18290;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AD12_RS18290;old_locus_tag=AD12_0856 NZ_JJLK01000055.1 Protein Homology CDS 1146 2564 . + 0 ID=cds-WP_000207146.1;Parent=gene-AD12_RS18290;Dbxref=GenBank:WP_000207146.1;Name=WP_000207146.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740284.1;locus_tag=AD12_RS18290;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000207146.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 2606 4087 . - . ID=gene-AD12_RS18285;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AD12_RS18285;old_locus_tag=AD12_0857 NZ_JJLK01000055.1 Protein Homology CDS 2606 4087 . - 0 ID=cds-WP_032286363.1;Parent=gene-AD12_RS18285;Dbxref=GenBank:WP_032286363.1;Name=WP_032286363.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706523.1;locus_tag=AD12_RS18285;product=dipeptide permease DtpD;protein_id=WP_032286363.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 4358 5101 . + . ID=gene-AD12_RS18280;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AD12_RS18280;old_locus_tag=AD12_0858 NZ_JJLK01000055.1 Protein Homology CDS 4358 5101 . + 0 ID=cds-WP_000798871.1;Parent=gene-AD12_RS18280;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AD12_RS18280;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 5124 5780 . + . ID=gene-AD12_RS18275;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AD12_RS18275;old_locus_tag=AD12_0859 NZ_JJLK01000055.1 Protein Homology CDS 5124 5780 . + 0 ID=cds-WP_001188343.1;Parent=gene-AD12_RS18275;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AD12_RS18275;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 5774 6706 . + . ID=gene-AD12_RS18270;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AD12_RS18270;old_locus_tag=AD12_0860 NZ_JJLK01000055.1 Protein Homology CDS 5774 6706 . + 0 ID=cds-WP_000912736.1;Parent=gene-AD12_RS18270;Dbxref=GenBank:WP_000912736.1;Name=WP_000912736.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308764.1;locus_tag=AD12_RS18270;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912736.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 6696 7430 . + . ID=gene-AD12_RS18265;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AD12_RS18265;old_locus_tag=AD12_0861 NZ_JJLK01000055.1 Protein Homology CDS 6696 7430 . + 0 ID=cds-WP_000687114.1;Parent=gene-AD12_RS18265;Dbxref=GenBank:WP_000687114.1;Name=WP_000687114.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706520.1;locus_tag=AD12_RS18265;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687114.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 7466 8257 . + . ID=gene-AD12_RS18260;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AD12_RS18260;old_locus_tag=AD12_0862 NZ_JJLK01000055.1 Protein Homology CDS 7466 8257 . + 0 ID=cds-WP_001114028.1;Parent=gene-AD12_RS18260;Dbxref=GenBank:WP_001114028.1;Name=WP_001114028.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308766.1;locus_tag=AD12_RS18260;product=endonuclease VIII;protein_id=WP_001114028.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 8254 9300 . - . ID=gene-AD12_RS18255;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AD12_RS18255;old_locus_tag=AD12_0863 NZ_JJLK01000055.1 Protein Homology CDS 8254 9300 . - 0 ID=cds-WP_001297246.1;Parent=gene-AD12_RS18255;Dbxref=GenBank:WP_001297246.1;Name=WP_001297246.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AD12_RS18255;product=AbrB family transcriptional regulator;protein_id=WP_001297246.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 9452 10513 . - . ID=gene-AD12_RS0123375;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AD12_RS0123375 NZ_JJLK01000055.1 Protein Homology CDS 9452 10513 . - 0 ID=cds-WP_032286364.1;Parent=gene-AD12_RS0123375;Dbxref=GenBank:WP_032286364.1;Name=WP_032286364.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AD12_RS0123375;product=fimbrial protein;protein_id=WP_032286364.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 10510 11241 . - . ID=gene-AD12_RS18250;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AD12_RS18250;old_locus_tag=AD12_0865 NZ_JJLK01000055.1 Protein Homology CDS 10510 11241 . - 0 ID=cds-WP_000143529.1;Parent=gene-AD12_RS18250;Dbxref=GenBank:WP_000143529.1;Name=WP_000143529.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706517.2;locus_tag=AD12_RS18250;product=fimbrial biogenesis chaperone;protein_id=WP_000143529.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 11256 13715 . - . ID=gene-AD12_RS18245;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=AD12_RS18245;old_locus_tag=AD12_0866 NZ_JJLK01000055.1 Protein Homology CDS 11256 13715 . - 0 ID=cds-WP_187439330.1;Parent=gene-AD12_RS18245;Dbxref=GenBank:WP_187439330.1;Name=WP_187439330.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ybgQ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AD12_RS18245;product=fimbria/pilus outer membrane usher protein;protein_id=WP_187439330.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 13766 14332 . - . ID=gene-AD12_RS18240;Name=AD12_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS18240;old_locus_tag=AD12_0867 NZ_JJLK01000055.1 Protein Homology CDS 13766 14332 . - 0 ID=cds-WP_000472422.1;Parent=gene-AD12_RS18240;Dbxref=GenBank:WP_000472422.1;Name=WP_000472422.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706515.1;locus_tag=AD12_RS18240;product=fimbrial protein;protein_id=WP_000472422.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 14723 16006 . - . ID=gene-AD12_RS18235;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AD12_RS18235;old_locus_tag=AD12_0869 NZ_JJLK01000055.1 Protein Homology CDS 14723 16006 . - 0 ID=cds-WP_000785834.1;Parent=gene-AD12_RS18235;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AD12_RS18235;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 16212 16319 . - . ID=gene-AD12_RS28585;Name=AD12_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28585 NZ_JJLK01000055.1 Protein Homology CDS 16212 16319 . - 0 ID=cds-WP_001305582.1;Parent=gene-AD12_RS28585;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AD12_RS28585;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 16700 17104 . + . ID=gene-AD12_RS0123385;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AD12_RS0123385 NZ_JJLK01000055.1 Protein Homology CDS 16700 17104 . + 0 ID=cds-WP_000263347.1;Parent=gene-AD12_RS0123385;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AD12_RS0123385;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 17098 17445 . + . ID=gene-AD12_RS18230;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AD12_RS18230;old_locus_tag=AD12_0872 NZ_JJLK01000055.1 Protein Homology CDS 17098 17445 . + 0 ID=cds-WP_000254365.1;Parent=gene-AD12_RS18230;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AD12_RS18230;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 17445 19211 . + . ID=gene-AD12_RS18225;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AD12_RS18225;old_locus_tag=AD12_0873 NZ_JJLK01000055.1 Protein Homology CDS 17445 19211 . + 0 ID=cds-WP_000775540.1;Parent=gene-AD12_RS18225;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AD12_RS18225;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 19227 19943 . + . ID=gene-AD12_RS18220;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AD12_RS18220;old_locus_tag=AD12_0874 NZ_JJLK01000055.1 Protein Homology CDS 19227 19943 . + 0 ID=cds-WP_001235263.1;Parent=gene-AD12_RS18220;Dbxref=GenBank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AD12_RS18220;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 20244 23045 . + . ID=gene-AD12_RS18215;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AD12_RS18215;old_locus_tag=AD12_0876 NZ_JJLK01000055.1 Protein Homology CDS 20244 23045 . + 0 ID=cds-WP_001181473.1;Parent=gene-AD12_RS18215;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AD12_RS18215;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 23060 24277 . + . ID=gene-AD12_RS18210;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AD12_RS18210;old_locus_tag=AD12_0877 NZ_JJLK01000055.1 Protein Homology CDS 23060 24277 . + 0 ID=cds-WP_000099823.1;Parent=gene-AD12_RS18210;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AD12_RS18210;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 24371 25537 . + . ID=gene-AD12_RS18205;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AD12_RS18205;old_locus_tag=AD12_0878 NZ_JJLK01000055.1 Protein Homology CDS 24371 25537 . + 0 ID=cds-WP_001048602.1;Parent=gene-AD12_RS18205;Dbxref=GenBank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AD12_RS18205;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 25537 26406 . + . ID=gene-AD12_RS18200;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AD12_RS18200;old_locus_tag=AD12_0879 NZ_JJLK01000055.1 Protein Homology CDS 25537 26406 . + 0 ID=cds-WP_000025458.1;Parent=gene-AD12_RS18200;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AD12_RS18200;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 26510 27232 . - . ID=gene-AD12_RS18195;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AD12_RS18195;old_locus_tag=AD12_0880 NZ_JJLK01000055.1 Protein Homology CDS 26510 27232 . - 0 ID=cds-WP_000509899.1;Parent=gene-AD12_RS18195;Dbxref=GenBank:WP_000509899.1;Name=WP_000509899.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AD12_RS18195;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509899.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 27401 29317 . + . ID=gene-AD12_RS18190;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AD12_RS18190;old_locus_tag=AD12_0881 NZ_JJLK01000055.1 Protein Homology CDS 27401 29317 . + 0 ID=cds-WP_001054863.1;Parent=gene-AD12_RS18190;Dbxref=GenBank:WP_001054863.1;Name=WP_001054863.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AD12_RS18190;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054863.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 29335 31968 . + . ID=gene-AD12_RS18185;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AD12_RS18185;old_locus_tag=AD12_0882 NZ_JJLK01000055.1 Protein Homology CDS 29335 31968 . + 0 ID=cds-WP_000649007.1;Parent=gene-AD12_RS18185;Dbxref=GenBank:WP_000649007.1;Name=WP_000649007.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AD12_RS18185;product=mannosylglycerate hydrolase;protein_id=WP_000649007.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 32815 34383 . + . ID=gene-AD12_RS18175;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AD12_RS18175;old_locus_tag=AD12_0884 NZ_JJLK01000055.1 Protein Homology CDS 32815 34383 . + 0 ID=cds-WP_001356183.1;Parent=gene-AD12_RS18175;Dbxref=GenBank:WP_001356183.1;Name=WP_001356183.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AD12_RS18175;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_001356183.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 34399 35538 . + . ID=gene-AD12_RS18170;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AD12_RS18170;old_locus_tag=AD12_0885 NZ_JJLK01000055.1 Protein Homology CDS 34399 35538 . + 0 ID=cds-WP_032286366.1;Parent=gene-AD12_RS18170;Dbxref=GenBank:WP_032286366.1;Name=WP_032286366.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AD12_RS18170;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032286366.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 35553 35666 . + . ID=gene-AD12_RS18165;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AD12_RS18165;old_locus_tag=AD12_0886 NZ_JJLK01000055.1 Protein Homology CDS 35553 35666 . + 0 ID=cds-WP_000270282.1;Parent=gene-AD12_RS18165;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AD12_RS18165;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 35666 35959 . + . ID=gene-AD12_RS0123395;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AD12_RS0123395;old_locus_tag=AD12_0887 NZ_JJLK01000055.1 Protein Homology CDS 35666 35959 . + 0 ID=cds-WP_000034602.1;Parent=gene-AD12_RS0123395;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AD12_RS0123395;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 36109 36513 . + . ID=gene-AD12_RS18160;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AD12_RS18160;old_locus_tag=AD12_0888 NZ_JJLK01000055.1 Protein Homology CDS 36109 36513 . + 0 ID=cds-WP_001098384.1;Parent=gene-AD12_RS18160;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AD12_RS18160;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 36510 37202 . + . ID=gene-AD12_RS18155;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AD12_RS18155;old_locus_tag=AD12_0889 NZ_JJLK01000055.1 Protein Homology CDS 36510 37202 . + 0 ID=cds-WP_077745025.1;Parent=gene-AD12_RS18155;Dbxref=GenBank:WP_077745025.1;Name=WP_077745025.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AD12_RS18155;product=Tol-Pal system protein TolQ;protein_id=WP_077745025.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 37206 37634 . + . ID=gene-AD12_RS18150;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AD12_RS18150;old_locus_tag=AD12_0890 NZ_JJLK01000055.1 Protein Homology CDS 37206 37634 . + 0 ID=cds-WP_000090097.1;Parent=gene-AD12_RS18150;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AD12_RS18150;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 37699 38964 . + . ID=gene-AD12_RS18145;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AD12_RS18145;old_locus_tag=AD12_0891 NZ_JJLK01000055.1 Protein Homology CDS 37699 38964 . + 0 ID=cds-WP_000030637.1;Parent=gene-AD12_RS18145;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AD12_RS18145;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 39097 40389 . + . ID=gene-AD12_RS18140;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AD12_RS18140;old_locus_tag=AD12_0892 NZ_JJLK01000055.1 Protein Homology CDS 39097 40389 . + 0 ID=cds-WP_001295307.1;Parent=gene-AD12_RS18140;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AD12_RS18140;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 40424 40945 . + . ID=gene-AD12_RS18135;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AD12_RS18135;old_locus_tag=AD12_0893 NZ_JJLK01000055.1 Protein Homology CDS 40424 40945 . + 0 ID=cds-WP_001295306.1;Parent=gene-AD12_RS18135;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AD12_RS18135;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 40955 41746 . + . ID=gene-AD12_RS18130;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AD12_RS18130;old_locus_tag=AD12_0894 NZ_JJLK01000055.1 Protein Homology CDS 40955 41746 . + 0 ID=cds-WP_000097580.1;Parent=gene-AD12_RS18130;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AD12_RS18130;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 41911 41986 . + . ID=gene-AD12_RS18125;Name=AD12_RS18125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18125;old_locus_tag=AD12_0895 NZ_JJLK01000055.1 tRNAscan-SE tRNA 41911 41986 . + . ID=rna-AD12_RS18125;Parent=gene-AD12_RS18125;anticodon=(pos:41944..41946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18125;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 41911 41986 . + . ID=exon-AD12_RS18125-1;Parent=rna-AD12_RS18125;anticodon=(pos:41944..41946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18125;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 42122 42197 . + . ID=gene-AD12_RS18120;Name=AD12_RS18120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18120;old_locus_tag=AD12_0896 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42122 42197 . + . ID=rna-AD12_RS18120;Parent=gene-AD12_RS18120;anticodon=(pos:42155..42157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18120;product=tRNA-Val NZ_JJLK01000055.1 tRNAscan-SE exon 42122 42197 . + . ID=exon-AD12_RS18120-1;Parent=rna-AD12_RS18120;anticodon=(pos:42155..42157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18120;product=tRNA-Val NZ_JJLK01000055.1 RefSeq gene 42200 42275 . + . ID=gene-AD12_RS18115;Name=AD12_RS18115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18115;old_locus_tag=AD12_0897 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42200 42275 . + . ID=rna-AD12_RS18115;Parent=gene-AD12_RS18115;anticodon=(pos:42233..42235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18115;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 42200 42275 . + . ID=exon-AD12_RS18115-1;Parent=rna-AD12_RS18115;anticodon=(pos:42233..42235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18115;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 42411 42486 . + . ID=gene-AD12_RS18110;Name=AD12_RS18110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18110;old_locus_tag=AD12_0898 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42411 42486 . + . ID=rna-AD12_RS18110;Parent=gene-AD12_RS18110;anticodon=(pos:42444..42446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18110;product=tRNA-Val NZ_JJLK01000055.1 tRNAscan-SE exon 42411 42486 . + . ID=exon-AD12_RS18110-1;Parent=rna-AD12_RS18110;anticodon=(pos:42444..42446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18110;product=tRNA-Val NZ_JJLK01000055.1 RefSeq gene 42489 42564 . + . ID=gene-AD12_RS18105;Name=AD12_RS18105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18105;old_locus_tag=AD12_0899 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42489 42564 . + . ID=rna-AD12_RS18105;Parent=gene-AD12_RS18105;anticodon=(pos:42522..42524);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18105;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 42489 42564 . + . ID=exon-AD12_RS18105-1;Parent=rna-AD12_RS18105;anticodon=(pos:42522..42524);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18105;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 42714 42789 . + . ID=gene-AD12_RS18100;Name=AD12_RS18100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18100;old_locus_tag=AD12_0900 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42714 42789 . + . ID=rna-AD12_RS18100;Parent=gene-AD12_RS18100;anticodon=(pos:42747..42749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18100;product=tRNA-Val NZ_JJLK01000055.1 tRNAscan-SE exon 42714 42789 . + . ID=exon-AD12_RS18100-1;Parent=rna-AD12_RS18100;anticodon=(pos:42747..42749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18100;product=tRNA-Val NZ_JJLK01000055.1 RefSeq gene 42792 42867 . + . ID=gene-AD12_RS18095;Name=AD12_RS18095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18095;old_locus_tag=AD12_0901 NZ_JJLK01000055.1 tRNAscan-SE tRNA 42792 42867 . + . ID=rna-AD12_RS18095;Parent=gene-AD12_RS18095;anticodon=(pos:42825..42827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18095;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 42792 42867 . + . ID=exon-AD12_RS18095-1;Parent=rna-AD12_RS18095;anticodon=(pos:42825..42827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18095;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43017 43092 . + . ID=gene-AD12_RS18090;Name=AD12_RS18090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18090;old_locus_tag=AD12_0902 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43017 43092 . + . ID=rna-AD12_RS18090;Parent=gene-AD12_RS18090;anticodon=(pos:43050..43052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18090;product=tRNA-Val NZ_JJLK01000055.1 tRNAscan-SE exon 43017 43092 . + . ID=exon-AD12_RS18090-1;Parent=rna-AD12_RS18090;anticodon=(pos:43050..43052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18090;product=tRNA-Val NZ_JJLK01000055.1 RefSeq gene 43096 43171 . + . ID=gene-AD12_RS18085;Name=AD12_RS18085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18085;old_locus_tag=AD12_0903 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43096 43171 . + . ID=rna-AD12_RS18085;Parent=gene-AD12_RS18085;anticodon=(pos:43129..43131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18085;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43096 43171 . + . ID=exon-AD12_RS18085-1;Parent=rna-AD12_RS18085;anticodon=(pos:43129..43131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18085;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43318 43393 . + . ID=gene-AD12_RS18080;Name=AD12_RS18080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18080;old_locus_tag=AD12_0904 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43318 43393 . + . ID=rna-AD12_RS18080;Parent=gene-AD12_RS18080;anticodon=(pos:43351..43353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18080;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43318 43393 . + . ID=exon-AD12_RS18080-1;Parent=rna-AD12_RS18080;anticodon=(pos:43351..43353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18080;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43540 43615 . + . ID=gene-AD12_RS18075;Name=AD12_RS18075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18075;old_locus_tag=AD12_0905 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43540 43615 . + . ID=rna-AD12_RS18075;Parent=gene-AD12_RS18075;anticodon=(pos:43573..43575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18075;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43540 43615 . + . ID=exon-AD12_RS18075-1;Parent=rna-AD12_RS18075;anticodon=(pos:43573..43575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18075;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43649 43724 . + . ID=gene-AD12_RS18070;Name=AD12_RS18070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18070;old_locus_tag=AD12_0906 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43649 43724 . + . ID=rna-AD12_RS18070;Parent=gene-AD12_RS18070;anticodon=(pos:43682..43684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18070;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43649 43724 . + . ID=exon-AD12_RS18070-1;Parent=rna-AD12_RS18070;anticodon=(pos:43682..43684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18070;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43758 43833 . + . ID=gene-AD12_RS18065;Name=AD12_RS18065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18065;old_locus_tag=AD12_0907 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43758 43833 . + . ID=rna-AD12_RS18065;Parent=gene-AD12_RS18065;anticodon=(pos:43791..43793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18065;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43758 43833 . + . ID=exon-AD12_RS18065-1;Parent=rna-AD12_RS18065;anticodon=(pos:43791..43793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18065;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43867 43942 . + . ID=gene-AD12_RS18060;Name=AD12_RS18060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18060;old_locus_tag=AD12_0908 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43867 43942 . + . ID=rna-AD12_RS18060;Parent=gene-AD12_RS18060;anticodon=(pos:43900..43902);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18060;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43867 43942 . + . ID=exon-AD12_RS18060-1;Parent=rna-AD12_RS18060;anticodon=(pos:43900..43902);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18060;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 43976 44051 . + . ID=gene-AD12_RS18055;Name=AD12_RS18055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS18055;old_locus_tag=AD12_0909 NZ_JJLK01000055.1 tRNAscan-SE tRNA 43976 44051 . + . ID=rna-AD12_RS18055;Parent=gene-AD12_RS18055;anticodon=(pos:44009..44011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18055;product=tRNA-Lys NZ_JJLK01000055.1 tRNAscan-SE exon 43976 44051 . + . ID=exon-AD12_RS18055-1;Parent=rna-AD12_RS18055;anticodon=(pos:44009..44011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS18055;product=tRNA-Lys NZ_JJLK01000055.1 RefSeq gene 44082 44207 . + . ID=gene-AD12_RS25770;Name=AD12_RS25770;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25770 NZ_JJLK01000055.1 cmsearch ncRNA 44082 44207 . + . ID=rna-AD12_RS25770;Parent=gene-AD12_RS25770;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25770;product=RtT sRNA NZ_JJLK01000055.1 cmsearch exon 44082 44207 . + . ID=exon-AD12_RS25770-1;Parent=rna-AD12_RS25770;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25770;product=RtT sRNA NZ_JJLK01000055.1 RefSeq gene 44456 45499 . + . ID=gene-AD12_RS18050;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD12_RS18050;old_locus_tag=AD12_0910 NZ_JJLK01000055.1 Protein Homology CDS 44456 45499 . + 0 ID=cds-WP_000115301.1;Parent=gene-AD12_RS18050;Dbxref=GenBank:WP_000115301.1;Name=WP_000115301.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AD12_RS18050;product=quinolinate synthase NadA;protein_id=WP_000115301.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 45537 46256 . + . ID=gene-AD12_RS18045;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AD12_RS18045;old_locus_tag=AD12_0911 NZ_JJLK01000055.1 Protein Homology CDS 45537 46256 . + 0 ID=cds-WP_000345410.1;Parent=gene-AD12_RS18045;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AD12_RS18045;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 46253 47194 . - . ID=gene-AD12_RS18040;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AD12_RS18040;old_locus_tag=AD12_0912 NZ_JJLK01000055.1 Protein Homology CDS 46253 47194 . - 0 ID=cds-WP_000951292.1;Parent=gene-AD12_RS18040;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AD12_RS18040;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 47308 47688 . - . ID=gene-AD12_RS18035;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AD12_RS18035;old_locus_tag=AD12_0913 NZ_JJLK01000055.1 Protein Homology CDS 47308 47688 . - 0 ID=cds-WP_000784351.1;Parent=gene-AD12_RS18035;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AD12_RS18035;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 48004 49056 . + . ID=gene-AD12_RS18030;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AD12_RS18030;old_locus_tag=AD12_0914 NZ_JJLK01000055.1 Protein Homology CDS 48004 49056 . + 0 ID=cds-WP_001109192.1;Parent=gene-AD12_RS18030;Dbxref=GenBank:WP_001109192.1;Name=WP_001109192.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AD12_RS18030;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109192.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 49214 49966 . - . ID=gene-AD12_RS18025;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AD12_RS18025;old_locus_tag=AD12_0915 NZ_JJLK01000055.1 Protein Homology CDS 49214 49966 . - 0 ID=cds-WP_001295305.1;Parent=gene-AD12_RS18025;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AD12_RS18025;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 50171 51211 . - . ID=gene-AD12_RS18020;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AD12_RS18020;old_locus_tag=AD12_0916 NZ_JJLK01000055.1 Protein Homology CDS 50171 51211 . - 0 ID=cds-WP_000931389.1;Parent=gene-AD12_RS18020;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AD12_RS18020;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 51205 52353 . - . ID=gene-AD12_RS18015;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AD12_RS18015;old_locus_tag=AD12_0917 NZ_JJLK01000055.1 Protein Homology CDS 51205 52353 . - 0 ID=cds-WP_000053415.1;Parent=gene-AD12_RS18015;Dbxref=GenBank:WP_000053415.1;Name=WP_000053415.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AD12_RS18015;product=galactokinase;protein_id=WP_000053415.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 52357 53403 . - . ID=gene-AD12_RS18010;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AD12_RS18010;old_locus_tag=AD12_0918 NZ_JJLK01000055.1 Protein Homology CDS 52357 53403 . - 0 ID=cds-WP_000191508.1;Parent=gene-AD12_RS18010;Dbxref=GenBank:WP_000191508.1;Name=WP_000191508.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308813.1;locus_tag=AD12_RS18010;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191508.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 53413 54429 . - . ID=gene-AD12_RS18005;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AD12_RS18005;old_locus_tag=AD12_0919 NZ_JJLK01000055.1 Protein Homology CDS 53413 54429 . - 0 ID=cds-WP_001265438.1;Parent=gene-AD12_RS18005;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AD12_RS18005;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 54690 56162 . - . ID=gene-AD12_RS18000;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AD12_RS18000;old_locus_tag=AD12_0920 NZ_JJLK01000055.1 Protein Homology CDS 54690 56162 . - 0 ID=cds-WP_000096824.1;Parent=gene-AD12_RS18000;Dbxref=GenBank:WP_000096824.1;Name=WP_000096824.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AD12_RS18000;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096824.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 56230 57018 . - . ID=gene-AD12_RS17995;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AD12_RS17995;old_locus_tag=AD12_0921 NZ_JJLK01000055.1 Protein Homology CDS 56230 57018 . - 0 ID=cds-WP_001147436.1;Parent=gene-AD12_RS17995;Dbxref=GenBank:WP_001147436.1;Name=WP_001147436.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AD12_RS17995;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147436.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 57147 57296 . + . ID=gene-AD12_RS17990;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AD12_RS17990;old_locus_tag=AD12_0922 NZ_JJLK01000055.1 Protein Homology CDS 57147 57296 . + 0 ID=cds-WP_000891515.1;Parent=gene-AD12_RS17990;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AD12_RS17990;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 57463 58236 . + . ID=gene-AD12_RS17985;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AD12_RS17985;old_locus_tag=AD12_0923 NZ_JJLK01000055.1 Protein Homology CDS 57463 58236 . + 0 ID=cds-WP_000101993.1;Parent=gene-AD12_RS17985;Dbxref=GenBank:WP_000101993.1;Name=WP_000101993.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308818.1;locus_tag=AD12_RS17985;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101993.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 58236 58925 . + . ID=gene-AD12_RS17980;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AD12_RS17980;old_locus_tag=AD12_0924 NZ_JJLK01000055.1 Protein Homology CDS 58236 58925 . + 0 ID=cds-WP_000604034.1;Parent=gene-AD12_RS17980;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AD12_RS17980;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 58928 59986 . + . ID=gene-AD12_RS17975;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AD12_RS17975;old_locus_tag=AD12_0925 NZ_JJLK01000055.1 Protein Homology CDS 58928 59986 . + 0 ID=cds-WP_000891692.1;Parent=gene-AD12_RS17975;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AD12_RS17975;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 59987 60805 . - . ID=gene-AD12_RS17970;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AD12_RS17970;old_locus_tag=AD12_0926 NZ_JJLK01000055.1 Protein Homology CDS 59987 60805 . - 0 ID=cds-WP_000213425.1;Parent=gene-AD12_RS17970;Dbxref=GenBank:WP_000213425.1;Name=WP_000213425.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308821.1;locus_tag=AD12_RS17970;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_000213425.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 60960 61955 . + . ID=gene-AD12_RS17965;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AD12_RS17965;old_locus_tag=AD12_0927 NZ_JJLK01000055.1 Protein Homology CDS 60960 61955 . + 0 ID=cds-WP_000815449.1;Parent=gene-AD12_RS17965;Dbxref=GenBank:WP_000815449.1;Name=WP_000815449.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AD12_RS17965;product=6-phosphogluconolactonase;protein_id=WP_000815449.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 61996 62949 . - . ID=gene-AD12_RS17960;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AD12_RS17960;old_locus_tag=AD12_0928 NZ_JJLK01000055.1 Protein Homology CDS 61996 62949 . - 0 ID=cds-WP_000679972.1;Parent=gene-AD12_RS17960;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AD12_RS17960;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 63133 64185 . + . ID=gene-AD12_RS17955;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AD12_RS17955;old_locus_tag=AD12_0930 NZ_JJLK01000055.1 Protein Homology CDS 63133 64185 . + 0 ID=cds-WP_000723652.1;Parent=gene-AD12_RS17955;Dbxref=GenBank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AD12_RS17955;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 64261 65694 . + . ID=gene-AD12_RS17950;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=AD12_RS17950;old_locus_tag=AD12_0931 NZ_JJLK01000055.1 Protein Homology CDS 64261 65694 . + 0 ID=cds-WP_001036475.1;Parent=gene-AD12_RS17950;Dbxref=GenBank:WP_001036475.1;Name=WP_001036475.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AD12_RS17950;product=anion permease;protein_id=WP_001036475.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 65877 68138 . + . ID=gene-AD12_RS17945;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AD12_RS17945;old_locus_tag=AD12_0932 NZ_JJLK01000055.1 Protein Homology CDS 65877 68138 . + 0 ID=cds-WP_032286368.1;Parent=gene-AD12_RS17945;Dbxref=GenBank:WP_032286368.1;Name=WP_032286368.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AD12_RS17945;product=hydratase;protein_id=WP_032286368.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 68372 69655 . - . ID=gene-AD12_RS17940;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AD12_RS17940;old_locus_tag=AD12_0933 NZ_JJLK01000055.1 Protein Homology CDS 68372 69655 . - 0 ID=cds-WP_001091569.1;Parent=gene-AD12_RS17940;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AD12_RS17940;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 69807 70283 . - . ID=gene-AD12_RS17935;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AD12_RS17935;old_locus_tag=AD12_0934 NZ_JJLK01000055.1 Protein Homology CDS 69807 70283 . - 0 ID=cds-WP_000767389.1;Parent=gene-AD12_RS17935;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AD12_RS17935;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 70342 71631 . - . ID=gene-AD12_RS17930;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AD12_RS17930;old_locus_tag=AD12_0935 NZ_JJLK01000055.1 Protein Homology CDS 70342 71631 . - 0 ID=cds-WP_001356070.1;Parent=gene-AD12_RS17930;Dbxref=GenBank:WP_001356070.1;Name=WP_001356070.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308879.1;locus_tag=AD12_RS17930;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001356070.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 71718 72758 . + . ID=gene-AD12_RS17925;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AD12_RS17925;old_locus_tag=AD12_0936 NZ_JJLK01000055.1 Protein Homology CDS 71718 72758 . + 0 ID=cds-WP_000951213.1;Parent=gene-AD12_RS17925;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AD12_RS17925;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 72755 73909 . + . ID=gene-AD12_RS17920;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AD12_RS17920;old_locus_tag=AD12_0937 NZ_JJLK01000055.1 Protein Homology CDS 72755 73909 . + 0 ID=cds-WP_000118826.1;Parent=gene-AD12_RS17920;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AD12_RS17920;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 73896 74651 . + . ID=gene-AD12_RS17915;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AD12_RS17915;old_locus_tag=AD12_0938 NZ_JJLK01000055.1 Protein Homology CDS 73896 74651 . + 0 ID=cds-WP_000246761.1;Parent=gene-AD12_RS17915;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AD12_RS17915;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 74644 75321 . + . ID=gene-AD12_RS17910;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD12_RS17910;old_locus_tag=AD12_0939 NZ_JJLK01000055.1 Protein Homology CDS 74644 75321 . + 0 ID=cds-WP_000044868.1;Parent=gene-AD12_RS17910;Dbxref=GenBank:WP_000044868.1;Name=WP_000044868.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706656.2;locus_tag=AD12_RS17910;product=dethiobiotin synthase;protein_id=WP_000044868.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 75900 77921 . + . ID=gene-AD12_RS17905;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AD12_RS17905;old_locus_tag=AD12_0940 NZ_JJLK01000055.1 Protein Homology CDS 75900 77921 . + 0 ID=cds-WP_000042533.1;Parent=gene-AD12_RS17905;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AD12_RS17905;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 78113 79021 . - . ID=gene-AD12_RS17900;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AD12_RS17900;old_locus_tag=AD12_0941 NZ_JJLK01000055.1 Protein Homology CDS 78113 79021 . - 0 ID=cds-WP_001295302.1;Parent=gene-AD12_RS17900;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AD12_RS17900;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JJLK01000055.1 cmsearch riboswitch 79286 79430 . + . ID=id-NZ_JJLK01000055.1:79286..79430;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000055.1 RefSeq gene 79418 80407 . + . ID=gene-AD12_RS17895;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AD12_RS17895;old_locus_tag=AD12_0942 NZ_JJLK01000055.1 Protein Homology CDS 79418 80407 . + 0 ID=cds-WP_001295301.1;Parent=gene-AD12_RS17895;Dbxref=GenBank:WP_001295301.1;Name=WP_001295301.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AD12_RS17895;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001295301.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 80429 80941 . + . ID=gene-AD12_RS17890;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AD12_RS17890;old_locus_tag=AD12_0943 NZ_JJLK01000055.1 Protein Homology CDS 80429 80941 . + 0 ID=cds-WP_000084632.1;Parent=gene-AD12_RS17890;Dbxref=GenBank:WP_000084632.1;Name=WP_000084632.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AD12_RS17890;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084632.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 80944 81429 . + . ID=gene-AD12_RS17885;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AD12_RS17885;old_locus_tag=AD12_0944 NZ_JJLK01000055.1 Protein Homology CDS 80944 81429 . + 0 ID=cds-WP_000080885.1;Parent=gene-AD12_RS17885;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AD12_RS17885;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 81422 81667 . + . ID=gene-AD12_RS17880;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AD12_RS17880;old_locus_tag=AD12_0945 NZ_JJLK01000055.1 Protein Homology CDS 81422 81667 . + 0 ID=cds-WP_000598619.1;Parent=gene-AD12_RS17880;Dbxref=GenBank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AD12_RS17880;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 81669 82121 . + . ID=gene-AD12_RS17875;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AD12_RS17875;old_locus_tag=AD12_0946 NZ_JJLK01000055.1 Protein Homology CDS 81669 82121 . + 0 ID=cds-WP_000852287.1;Parent=gene-AD12_RS17875;Dbxref=GenBank:WP_000852287.1;Name=WP_000852287.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AD12_RS17875;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852287.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 82258 82962 . + . ID=gene-AD12_RS17870;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AD12_RS17870;old_locus_tag=AD12_0947 NZ_JJLK01000055.1 Protein Homology CDS 82258 82962 . + 0 ID=cds-WP_032286369.1;Parent=gene-AD12_RS17870;Dbxref=GenBank:WP_032286369.1;Name=WP_032286369.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AD12_RS17870;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032286369.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 83167 83880 . + . ID=gene-AD12_RS17865;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AD12_RS17865;old_locus_tag=AD12_0948 NZ_JJLK01000055.1 Protein Homology CDS 83167 83880 . + 0 ID=cds-WP_000446932.1;Parent=gene-AD12_RS17865;Dbxref=GenBank:WP_000446932.1;Name=WP_000446932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AD12_RS17865;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446932.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 83916 84872 . - . ID=gene-AD12_RS17860;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AD12_RS17860;old_locus_tag=AD12_0949 NZ_JJLK01000055.1 Protein Homology CDS 83916 84872 . - 0 ID=cds-WP_000045448.1;Parent=gene-AD12_RS17860;Dbxref=GenBank:WP_000045448.1;Name=WP_000045448.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AD12_RS17860;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045448.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 84872 86113 . - . ID=gene-AD12_RS17855;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AD12_RS17855;old_locus_tag=AD12_0950 NZ_JJLK01000055.1 Protein Homology CDS 84872 86113 . - 0 ID=cds-WP_000650339.1;Parent=gene-AD12_RS17855;Dbxref=GenBank:WP_000650339.1;Name=WP_000650339.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AD12_RS17855;product=cardiolipin synthase ClsB;protein_id=WP_000650339.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 86110 86871 . - . ID=gene-AD12_RS17850;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AD12_RS17850;old_locus_tag=AD12_0951 NZ_JJLK01000055.1 Protein Homology CDS 86110 86871 . - 0 ID=cds-WP_001113348.1;Parent=gene-AD12_RS17850;Dbxref=GenBank:WP_001113348.1;Name=WP_001113348.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AD12_RS17850;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 87004 87414 . + . ID=gene-AD12_RS17845;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AD12_RS17845;old_locus_tag=AD12_0952 NZ_JJLK01000055.1 Protein Homology CDS 87004 87414 . + 0 ID=cds-WP_000871982.1;Parent=gene-AD12_RS17845;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AD12_RS17845;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 87376 88482 . - . ID=gene-AD12_RS17840;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AD12_RS17840;old_locus_tag=AD12_0953 NZ_JJLK01000055.1 Protein Homology CDS 87376 88482 . - 0 ID=cds-WP_000469031.1;Parent=gene-AD12_RS17840;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AD12_RS17840;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 88493 89626 . - . ID=gene-AD12_RS17835;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AD12_RS17835;old_locus_tag=AD12_0954 NZ_JJLK01000055.1 Protein Homology CDS 88493 89626 . - 0 ID=cds-WP_000070131.1;Parent=gene-AD12_RS17835;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AD12_RS17835;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 89619 91355 . - . ID=gene-AD12_RS17830;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AD12_RS17830;old_locus_tag=AD12_0955 NZ_JJLK01000055.1 Protein Homology CDS 89619 91355 . - 0 ID=cds-WP_001372518.1;Parent=gene-AD12_RS17830;Dbxref=GenBank:WP_001372518.1;Name=WP_001372518.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308899.2;locus_tag=AD12_RS17830;product=ATP-binding cassette domain-containing protein;protein_id=WP_001372518.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 91348 92343 . - . ID=gene-AD12_RS17825;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AD12_RS17825;old_locus_tag=AD12_0956 NZ_JJLK01000055.1 Protein Homology CDS 91348 92343 . - 0 ID=cds-WP_001324515.1;Parent=gene-AD12_RS17825;Dbxref=GenBank:WP_001324515.1;Name=WP_001324515.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AD12_RS17825;product=secretion protein HlyD;protein_id=WP_001324515.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 92346 93017 . - . ID=gene-AD12_RS17820;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AD12_RS17820;old_locus_tag=AD12_0957 NZ_JJLK01000055.1 Protein Homology CDS 92346 93017 . - 0 ID=cds-WP_001361582.1;Parent=gene-AD12_RS17820;Dbxref=GenBank:WP_001361582.1;Name=WP_001361582.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AD12_RS17820;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001361582.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 93246 94610 . + . ID=gene-AD12_RS17815;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AD12_RS17815;old_locus_tag=AD12_0958 NZ_JJLK01000055.1 Protein Homology CDS 93246 94610 . + 0 ID=cds-WP_000007101.1;Parent=gene-AD12_RS17815;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AD12_RS17815;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 94842 95324 . - . ID=gene-AD12_RS17810;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AD12_RS17810;old_locus_tag=AD12_0959 NZ_JJLK01000055.1 Protein Homology CDS 94842 95324 . - 0 ID=cds-WP_001145127.1;Parent=gene-AD12_RS17810;Dbxref=GenBank:WP_001145127.1;Name=WP_001145127.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AD12_RS17810;product=N-glycosidase YbiA;protein_id=WP_001145127.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 95444 97594 . + . ID=gene-AD12_RS17805;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AD12_RS17805;old_locus_tag=AD12_0960 NZ_JJLK01000055.1 Protein Homology CDS 95444 97594 . + 0 ID=cds-WP_001340191.1;Parent=gene-AD12_RS17805;Dbxref=GenBank:WP_001340191.1;Name=WP_001340191.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AD12_RS17805;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 97622 98584 . + . ID=gene-AD12_RS17800;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AD12_RS17800;old_locus_tag=AD12_0961 NZ_JJLK01000055.1 Protein Homology CDS 97622 98584 . + 0 ID=cds-WP_000386551.1;Parent=gene-AD12_RS17800;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AD12_RS17800;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 98725 99810 . + . ID=gene-AD12_RS17795;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AD12_RS17795;old_locus_tag=AD12_0962 NZ_JJLK01000055.1 Protein Homology CDS 98725 99810 . + 0 ID=cds-WP_000443530.1;Parent=gene-AD12_RS17795;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AD12_RS17795;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 99877 99936 . + . ID=gene-AD12_RS29225;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AD12_RS29225 NZ_JJLK01000055.1 Protein Homology CDS 99877 99936 . + 0 ID=cds-WP_211180490.1;Parent=gene-AD12_RS29225;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AD12_RS29225;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 100039 100299 . - . ID=gene-AD12_RS0123415;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AD12_RS0123415;old_locus_tag=AD12_0963 NZ_JJLK01000055.1 Protein Homology CDS 100039 100299 . - 0 ID=cds-WP_000849301.1;Parent=gene-AD12_RS0123415;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AD12_RS0123415;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 100564 100830 . - . ID=gene-AD12_RS17790;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AD12_RS17790;old_locus_tag=AD12_0964 NZ_JJLK01000055.1 Protein Homology CDS 100564 100830 . - 0 ID=cds-WP_000146343.1;Parent=gene-AD12_RS17790;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AD12_RS17790;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 100904 101581 . - . ID=gene-AD12_RS17785;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AD12_RS17785;old_locus_tag=AD12_0965 NZ_JJLK01000055.1 Protein Homology CDS 100904 101581 . - 0 ID=cds-WP_000990177.1;Parent=gene-AD12_RS17785;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AD12_RS17785;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 101623 103905 . - . ID=gene-AD12_RS17780;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AD12_RS17780;old_locus_tag=AD12_0966 NZ_JJLK01000055.1 Protein Homology CDS 101623 103905 . - 0 ID=cds-WP_000430057.1;Parent=gene-AD12_RS17780;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AD12_RS17780;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 104170 104430 . - . ID=gene-AD12_RS28590;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AD12_RS28590;old_locus_tag=AD12_0967 NZ_JJLK01000055.1 Protein Homology CDS 104170 104430 . - 0 ID=cds-WP_000710619.1;Parent=gene-AD12_RS28590;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AD12_RS28590;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 104706 105632 . + . ID=gene-AD12_RS17775;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AD12_RS17775;old_locus_tag=AD12_0968 NZ_JJLK01000055.1 Protein Homology CDS 104706 105632 . + 0 ID=cds-WP_001295299.1;Parent=gene-AD12_RS17775;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AD12_RS17775;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 105629 107854 . - . ID=gene-AD12_RS17770;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AD12_RS17770;old_locus_tag=AD12_0969 NZ_JJLK01000055.1 Protein Homology CDS 105629 107854 . - 0 ID=cds-WP_001267253.1;Parent=gene-AD12_RS17770;Dbxref=GenBank:WP_001267253.1;Name=WP_001267253.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AD12_RS17770;product=mechanosensitive channel protein;protein_id=WP_001267253.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 108115 108837 . - . ID=gene-AD12_RS17765;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AD12_RS17765;old_locus_tag=AD12_0970 NZ_JJLK01000055.1 Protein Homology CDS 108115 108837 . - 0 ID=cds-WP_000569083.1;Parent=gene-AD12_RS17765;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AD12_RS17765;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 108834 109493 . - . ID=gene-AD12_RS17760;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AD12_RS17760;old_locus_tag=AD12_0971 NZ_JJLK01000055.1 Protein Homology CDS 108834 109493 . - 0 ID=cds-WP_001159065.1;Parent=gene-AD12_RS17760;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AD12_RS17760;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 109632 110378 . - . ID=gene-AD12_RS17755;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AD12_RS17755;old_locus_tag=AD12_0972 NZ_JJLK01000055.1 Protein Homology CDS 109632 110378 . - 0 ID=cds-WP_000843866.1;Parent=gene-AD12_RS17755;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AD12_RS17755;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 110782 111285 . - . ID=gene-AD12_RS17750;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AD12_RS17750;old_locus_tag=AD12_0973 NZ_JJLK01000055.1 Protein Homology CDS 110782 111285 . - 0 ID=cds-WP_000100800.1;Parent=gene-AD12_RS17750;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AD12_RS17750;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 111584 112471 . - . ID=gene-AD12_RS17745;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AD12_RS17745;old_locus_tag=AD12_0974 NZ_JJLK01000055.1 Protein Homology CDS 111584 112471 . - 0 ID=cds-WP_001295297.1;Parent=gene-AD12_RS17745;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AD12_RS17745;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 112706 112771 . + . ID=gene-AD12_RS28595;Name=AD12_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28595 NZ_JJLK01000055.1 Protein Homology CDS 112706 112771 . + 0 ID=cds-WP_120795379.1;Parent=gene-AD12_RS28595;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AD12_RS28595;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 112824 113339 . + . ID=gene-AD12_RS17740;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AD12_RS17740;old_locus_tag=AD12_0975 NZ_JJLK01000055.1 Protein Homology CDS 112824 113339 . + 0 ID=cds-WP_001295296.1;Parent=gene-AD12_RS17740;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AD12_RS17740;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 113388 114971 . - . ID=gene-AD12_RS17735;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AD12_RS17735;old_locus_tag=AD12_0976 NZ_JJLK01000055.1 Protein Homology CDS 113388 114971 . - 0 ID=cds-WP_001054678.1;Parent=gene-AD12_RS17735;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AD12_RS17735;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 115243 115371 . - . ID=gene-AD12_RS17730;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AD12_RS17730;old_locus_tag=AD12_0977 NZ_JJLK01000055.1 Protein Homology CDS 115243 115371 . - 0 ID=cds-WP_001001761.1;Parent=gene-AD12_RS17730;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AD12_RS17730;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 115557 116024 . + . ID=gene-AD12_RS17725;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AD12_RS17725;old_locus_tag=AD12_0978 NZ_JJLK01000055.1 Protein Homology CDS 115557 116024 . + 0 ID=cds-WP_000091016.1;Parent=gene-AD12_RS17725;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AD12_RS17725;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 116021 117139 . + . ID=gene-AD12_RS17720;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AD12_RS17720;old_locus_tag=AD12_0979 NZ_JJLK01000055.1 Protein Homology CDS 116021 117139 . + 0 ID=cds-WP_000056442.1;Parent=gene-AD12_RS17720;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AD12_RS17720;product=anion transporter;protein_id=WP_000056442.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 117198 118118 . - . ID=gene-AD12_RS17715;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AD12_RS17715;old_locus_tag=AD12_0980 NZ_JJLK01000055.1 Protein Homology CDS 117198 118118 . - 0 ID=cds-WP_001056384.1;Parent=gene-AD12_RS17715;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AD12_RS17715;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 118337 119929 . + . ID=gene-AD12_RS17710;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AD12_RS17710;old_locus_tag=AD12_0981 NZ_JJLK01000055.1 Protein Homology CDS 118337 119929 . + 0 ID=cds-WP_000961458.1;Parent=gene-AD12_RS17710;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AD12_RS17710;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 120170 121435 . - . ID=gene-AD12_RS17705;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AD12_RS17705;old_locus_tag=AD12_0982 NZ_JJLK01000055.1 Protein Homology CDS 120170 121435 . - 0 ID=cds-WP_032286370.1;Parent=gene-AD12_RS17705;Dbxref=GenBank:WP_032286370.1;Name=WP_032286370.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AD12_RS17705;product=DUF1479 domain-containing protein;protein_id=WP_032286370.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 121587 122402 . - . ID=gene-AD12_RS0123430;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AD12_RS0123430;old_locus_tag=AD12_0983 NZ_JJLK01000055.1 Protein Homology CDS 121587 122402 . - 0 ID=cds-WP_000114234.1;Parent=gene-AD12_RS0123430;Dbxref=GenBank:WP_000114234.1;Name=WP_000114234.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706699.1;locus_tag=AD12_RS0123430;product=sugar-phosphatase YbiV;protein_id=WP_000114234.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 122548 124980 . - . ID=gene-AD12_RS17700;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AD12_RS17700;old_locus_tag=AD12_0984 NZ_JJLK01000055.1 Protein Homology CDS 122548 124980 . - 0 ID=cds-WP_000209359.1;Parent=gene-AD12_RS17700;Dbxref=GenBank:WP_000209359.1;Name=WP_000209359.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AD12_RS17700;product=glycyl radical protein;protein_id=WP_000209359.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 124986 125885 . - . ID=gene-AD12_RS17695;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AD12_RS17695;old_locus_tag=AD12_0985 NZ_JJLK01000055.1 Protein Homology CDS 124986 125885 . - 0 ID=cds-WP_001295295.1;Parent=gene-AD12_RS17695;Dbxref=GenBank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AD12_RS17695;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 126016 126678 . + . ID=gene-AD12_RS17690;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD12_RS17690;old_locus_tag=AD12_0986 NZ_JJLK01000055.1 Protein Homology CDS 126016 126678 . + 0 ID=cds-WP_000424890.1;Parent=gene-AD12_RS17690;Dbxref=GenBank:WP_000424890.1;Name=WP_000424890.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AD12_RS17690;product=fructose-6-phosphate aldolase;protein_id=WP_000424890.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 126754 127503 . - . ID=gene-AD12_RS17685;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AD12_RS17685;old_locus_tag=AD12_0987 NZ_JJLK01000055.1 Protein Homology CDS 126754 127503 . - 0 ID=cds-WP_000829258.1;Parent=gene-AD12_RS17685;Dbxref=GenBank:WP_000829258.1;Name=WP_000829258.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=AD12_RS17685;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829258.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 127503 128738 . - . ID=gene-AD12_RS17680;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AD12_RS17680;old_locus_tag=AD12_0988 NZ_JJLK01000055.1 Protein Homology CDS 127503 128738 . - 0 ID=cds-WP_000397381.1;Parent=gene-AD12_RS17680;Dbxref=GenBank:WP_000397381.1;Name=WP_000397381.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AD12_RS17680;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397381.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 128942 129907 . + . ID=gene-AD12_RS17675;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AD12_RS17675;old_locus_tag=AD12_0989 NZ_JJLK01000055.1 Protein Homology CDS 128942 129907 . + 0 ID=cds-WP_000513775.1;Parent=gene-AD12_RS17675;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AD12_RS17675;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 129894 131765 . + . ID=gene-AD12_RS17670;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AD12_RS17670;old_locus_tag=AD12_0990 NZ_JJLK01000055.1 Protein Homology CDS 129894 131765 . + 0 ID=cds-WP_001315369.1;Parent=gene-AD12_RS17670;Dbxref=GenBank:WP_001315369.1;Name=WP_001315369.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AD12_RS17670;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001315369.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 131785 133323 . + . ID=gene-AD12_RS17665;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AD12_RS17665;old_locus_tag=AD12_0991 NZ_JJLK01000055.1 Protein Homology CDS 131785 133323 . + 0 ID=cds-WP_000090138.1;Parent=gene-AD12_RS17665;Dbxref=GenBank:WP_000090138.1;Name=WP_000090138.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308936.1;locus_tag=AD12_RS17665;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090138.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 133341 134261 . + . ID=gene-AD12_RS17660;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AD12_RS17660;old_locus_tag=AD12_0992 NZ_JJLK01000055.1 Protein Homology CDS 133341 134261 . + 0 ID=cds-WP_000936043.1;Parent=gene-AD12_RS17660;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AD12_RS17660;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 134264 135175 . + . ID=gene-AD12_RS17655;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AD12_RS17655;old_locus_tag=AD12_0993 NZ_JJLK01000055.1 Protein Homology CDS 134264 135175 . + 0 ID=cds-WP_001236044.1;Parent=gene-AD12_RS17655;Dbxref=GenBank:WP_001236044.1;Name=WP_001236044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=AD12_RS17655;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236044.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 135353 137701 . + . ID=gene-AD12_RS17650;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AD12_RS17650;old_locus_tag=AD12_0994 NZ_JJLK01000055.1 Protein Homology CDS 135353 137701 . + 0 ID=cds-WP_001307078.1;Parent=gene-AD12_RS17650;Dbxref=GenBank:WP_001307078.1;Name=WP_001307078.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AD12_RS17650;product=sensor domain-containing phosphodiesterase;protein_id=WP_001307078.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 137709 139037 . + . ID=gene-AD12_RS17645;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AD12_RS17645;old_locus_tag=AD12_0995 NZ_JJLK01000055.1 Protein Homology CDS 137709 139037 . + 0 ID=cds-WP_000086916.1;Parent=gene-AD12_RS17645;Dbxref=GenBank:WP_000086916.1;Name=WP_000086916.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308940.1;locus_tag=AD12_RS17645;product=GGDEF domain-containing protein;protein_id=WP_000086916.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 139084 140409 . - . ID=gene-AD12_RS17640;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AD12_RS17640;old_locus_tag=AD12_0996 NZ_JJLK01000055.1 Protein Homology CDS 139084 140409 . - 0 ID=cds-WP_000049367.1;Parent=gene-AD12_RS17640;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AD12_RS17640;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 140622 141005 . + . ID=gene-AD12_RS0123435;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AD12_RS0123435;old_locus_tag=AD12_0997 NZ_JJLK01000055.1 Protein Homology CDS 140622 141005 . + 0 ID=cds-WP_000497137.1;Parent=gene-AD12_RS0123435;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AD12_RS0123435;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 141116 142231 . + . ID=gene-AD12_RS17635;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AD12_RS17635;old_locus_tag=AD12_0998 NZ_JJLK01000055.1 Protein Homology CDS 141116 142231 . + 0 ID=cds-WP_000555035.1;Parent=gene-AD12_RS17635;Dbxref=GenBank:WP_000555035.1;Name=WP_000555035.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AD12_RS17635;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555035.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 142228 142854 . - . ID=gene-AD12_RS17630;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AD12_RS17630;old_locus_tag=AD12_0999 NZ_JJLK01000055.1 Protein Homology CDS 142228 142854 . - 0 ID=cds-WP_001295292.1;Parent=gene-AD12_RS17630;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AD12_RS17630;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 143101 144303 . + . ID=gene-AD12_RS17625;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AD12_RS17625;old_locus_tag=AD12_1000 NZ_JJLK01000055.1 Protein Homology CDS 143101 144303 . + 0 ID=cds-WP_000195961.1;Parent=gene-AD12_RS17625;Dbxref=GenBank:WP_000195961.1;Name=WP_000195961.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=AD12_RS17625;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195961.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 144350 145108 . - . ID=gene-AD12_RS17620;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AD12_RS17620;old_locus_tag=AD12_1001 NZ_JJLK01000055.1 Protein Homology CDS 144350 145108 . - 0 ID=cds-WP_000450121.1;Parent=gene-AD12_RS17620;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AD12_RS17620;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 145166 145762 . - . ID=gene-AD12_RS17615;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AD12_RS17615;old_locus_tag=AD12_1002 NZ_JJLK01000055.1 Protein Homology CDS 145166 145762 . - 0 ID=cds-WP_001324525.1;Parent=gene-AD12_RS17615;Dbxref=GenBank:WP_001324525.1;Name=WP_001324525.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308948.1;locus_tag=AD12_RS17615;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001324525.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 146047 147279 . + . ID=gene-AD12_RS17610;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AD12_RS17610;old_locus_tag=AD12_1003 NZ_JJLK01000055.1 Protein Homology CDS 146047 147279 . + 0 ID=cds-WP_001180081.1;Parent=gene-AD12_RS17610;Dbxref=GenBank:WP_001180081.1;Name=WP_001180081.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AD12_RS17610;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180081.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 147320 147604 . - . ID=gene-AD12_RS17605;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AD12_RS17605;old_locus_tag=AD12_1004 NZ_JJLK01000055.1 Protein Homology CDS 147320 147604 . - 0 ID=cds-WP_000605478.1;Parent=gene-AD12_RS17605;Dbxref=GenBank:WP_000605478.1;Name=WP_000605478.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AD12_RS17605;product=protein YbjH;protein_id=WP_000605478.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 147690 148505 . - . ID=gene-AD12_RS17600;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AD12_RS17600;old_locus_tag=AD12_1005 NZ_JJLK01000055.1 Protein Homology CDS 147690 148505 . - 0 ID=cds-WP_001299614.1;Parent=gene-AD12_RS17600;Dbxref=GenBank:WP_001299614.1;Name=WP_001299614.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AD12_RS17600;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_001299614.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 148505 149713 . - . ID=gene-AD12_RS17595;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AD12_RS17595;old_locus_tag=AD12_1006 NZ_JJLK01000055.1 Protein Homology CDS 148505 149713 . - 0 ID=cds-WP_000217869.1;Parent=gene-AD12_RS17595;Dbxref=GenBank:WP_000217869.1;Name=WP_000217869.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AD12_RS17595;product=MFS transporter;protein_id=WP_000217869.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 149797 150333 . + . ID=gene-AD12_RS17590;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AD12_RS17590;old_locus_tag=AD12_1007 NZ_JJLK01000055.1 Protein Homology CDS 149797 150333 . + 0 ID=cds-WP_001297003.1;Parent=gene-AD12_RS17590;Dbxref=GenBank:WP_001297003.1;Name=WP_001297003.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308953.1;locus_tag=AD12_RS17590;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001297003.1;transl_table=11 NZ_JJLK01000055.1 RefSeq gene 150435 150905 . - . ID=gene-AD12_RS29675;Name=AD12_RS29675;end_range=150905,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29675;old_locus_tag=AD12_1008;partial=true NZ_JJLK01000055.1 Protein Homology CDS 150435 150905 . - 0 ID=cds-WP_032286249.1-2;Parent=gene-AD12_RS29675;Dbxref=GenBank:WP_032286249.1;Name=WP_032286249.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=150905,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544402.1;locus_tag=AD12_RS29675;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032286249.1;transl_table=11 ##sequence-region NZ_JJLK01000056.1 1 239527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000056.1 RefSeq region 1 239527 . + . ID=NZ_JJLK01000056.1:1..239527;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000056.1 RefSeq gene 86 1141 . - . ID=gene-AD12_RS29680;Name=AD12_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29680;old_locus_tag=AD12_1009 NZ_JJLK01000056.1 Protein Homology CDS 86 1141 . - 0 ID=cds-WP_032286371.1;Parent=gene-AD12_RS29680;Dbxref=GenBank:WP_032286371.1;Name=WP_032286371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544402.1;locus_tag=AD12_RS29680;product=phage integrase;protein_id=WP_032286371.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 1212 3200 . - . ID=gene-AD12_RS17575;Name=AD12_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17575;old_locus_tag=AD12_1010 NZ_JJLK01000056.1 Protein Homology CDS 1212 3200 . - 0 ID=cds-WP_032286372.1;Parent=gene-AD12_RS17575;Dbxref=GenBank:WP_032286372.1;Name=WP_032286372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=AD12_RS17575;product=AAA family ATPase;protein_id=WP_032286372.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 3221 3811 . - . ID=gene-AD12_RS0123475;Name=AD12_RS0123475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123475 NZ_JJLK01000056.1 Protein Homology CDS 3221 3811 . - 0 ID=cds-WP_032286373.1;Parent=gene-AD12_RS0123475;Dbxref=GenBank:WP_032286373.1;Name=WP_032286373.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201301.1;locus_tag=AD12_RS0123475;product=phage repressor protein CI;protein_id=WP_032286373.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 3907 4128 . + . ID=gene-AD12_RS0123480;Name=AD12_RS0123480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123480 NZ_JJLK01000056.1 Protein Homology CDS 3907 4128 . + 0 ID=cds-WP_000188448.1;Parent=gene-AD12_RS0123480;Dbxref=GenBank:WP_000188448.1;Name=WP_000188448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487081.1;locus_tag=AD12_RS0123480;product=hypothetical protein;protein_id=WP_000188448.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 4161 4670 . + . ID=gene-AD12_RS17570;Name=AD12_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17570;old_locus_tag=AD12_1013 NZ_JJLK01000056.1 Protein Homology CDS 4161 4670 . + 0 ID=cds-WP_032286374.1;Parent=gene-AD12_RS17570;Dbxref=GenBank:WP_032286374.1;Name=WP_032286374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=AD12_RS17570;product=phage regulatory CII family protein;protein_id=WP_032286374.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 4678 4974 . + . ID=gene-AD12_RS29795;Name=AD12_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29795;old_locus_tag=AD12_1014 NZ_JJLK01000056.1 Protein Homology CDS 4678 4974 . + 0 ID=cds-WP_000956176.1;Parent=gene-AD12_RS29795;Dbxref=GenBank:WP_000956176.1;Name=WP_000956176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956176.1;locus_tag=AD12_RS29795;product=phage filamentation protein Fil family protein;protein_id=WP_000956176.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 5092 5433 . + . ID=gene-AD12_RS17565;Name=AD12_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17565;old_locus_tag=AD12_1015 NZ_JJLK01000056.1 Protein Homology CDS 5092 5433 . + 0 ID=cds-WP_000996717.1;Parent=gene-AD12_RS17565;Dbxref=GenBank:WP_000996717.1;Name=WP_000996717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=AD12_RS17565;product=DUF5347 domain-containing protein;protein_id=WP_000996717.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 5501 5734 . + . ID=gene-AD12_RS17560;Name=AD12_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17560;old_locus_tag=AD12_1016 NZ_JJLK01000056.1 Protein Homology CDS 5501 5734 . + 0 ID=cds-WP_001244228.1;Parent=gene-AD12_RS17560;Dbxref=GenBank:WP_001244228.1;Name=WP_001244228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=AD12_RS17560;product=DUF2732 family protein;protein_id=WP_001244228.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 5734 5961 . + . ID=gene-AD12_RS17555;Name=AD12_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17555;old_locus_tag=AD12_1017 NZ_JJLK01000056.1 Protein Homology CDS 5734 5961 . + 0 ID=cds-WP_000752619.1;Parent=gene-AD12_RS17555;Dbxref=GenBank:WP_000752619.1;Name=WP_000752619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=AD12_RS17555;product=TraR/DksA family transcriptional regulator;protein_id=WP_000752619.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 5958 6815 . + . ID=gene-AD12_RS17550;Name=AD12_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17550;old_locus_tag=AD12_1018 NZ_JJLK01000056.1 Protein Homology CDS 5958 6815 . + 0 ID=cds-WP_032286375.1;Parent=gene-AD12_RS17550;Dbxref=GenBank:WP_032286375.1;Name=WP_032286375.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522695.1;locus_tag=AD12_RS17550;product=DNA adenine methylase;protein_id=WP_032286375.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 6812 9226 . + . ID=gene-AD12_RS17545;Name=AD12_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17545;old_locus_tag=AD12_1019 NZ_JJLK01000056.1 Protein Homology CDS 6812 9226 . + 0 ID=cds-WP_032286376.1;Parent=gene-AD12_RS17545;Dbxref=GenBank:WP_032286376.1;Name=WP_032286376.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017528.1;locus_tag=AD12_RS17545;product=replication endonuclease;protein_id=WP_032286376.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 9379 9567 . + . ID=gene-AD12_RS0123485;Name=AD12_RS0123485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123485 NZ_JJLK01000056.1 Protein Homology CDS 9379 9567 . + 0 ID=cds-WP_001154431.1;Parent=gene-AD12_RS0123485;Dbxref=GenBank:WP_001154431.1;Name=WP_001154431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226015.1;locus_tag=AD12_RS0123485;product=hypothetical protein;protein_id=WP_001154431.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 9578 9811 . + . ID=gene-AD12_RS17540;Name=AD12_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17540;old_locus_tag=AD12_1020 NZ_JJLK01000056.1 Protein Homology CDS 9578 9811 . + 0 ID=cds-WP_001217575.1;Parent=gene-AD12_RS17540;Dbxref=GenBank:WP_001217575.1;Name=WP_001217575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226016.1;locus_tag=AD12_RS17540;product=DinI-like family protein;protein_id=WP_001217575.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 10004 10339 . - . ID=gene-AD12_RS0123490;Name=AD12_RS0123490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123490 NZ_JJLK01000056.1 Protein Homology CDS 10004 10339 . - 0 ID=cds-WP_001059831.1;Parent=gene-AD12_RS0123490;Dbxref=GenBank:WP_001059831.1;Name=WP_001059831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059831.1;locus_tag=AD12_RS0123490;product=hypothetical protein;protein_id=WP_001059831.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 10825 12216 . + . ID=gene-AD12_RS17535;Name=AD12_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17535;old_locus_tag=AD12_1021 NZ_JJLK01000056.1 Protein Homology CDS 10825 12216 . + 0 ID=cds-WP_032286377.1;Parent=gene-AD12_RS17535;Dbxref=GenBank:WP_032286377.1;Name=WP_032286377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471283.1;locus_tag=AD12_RS17535;product=RNA-binding domain-containing protein;protein_id=WP_032286377.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 12268 13293 . - . ID=gene-AD12_RS17530;Name=AD12_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17530;old_locus_tag=AD12_1022 NZ_JJLK01000056.1 Protein Homology CDS 12268 13293 . - 0 ID=cds-WP_032286378.1;Parent=gene-AD12_RS17530;Dbxref=GenBank:WP_032286378.1;Name=WP_032286378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748255.1;locus_tag=AD12_RS17530;product=phage portal protein;protein_id=WP_032286378.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 13293 15059 . - . ID=gene-AD12_RS17525;Name=AD12_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17525;old_locus_tag=AD12_1023 NZ_JJLK01000056.1 Protein Homology CDS 13293 15059 . - 0 ID=cds-WP_032286379.1;Parent=gene-AD12_RS17525;Dbxref=GenBank:WP_032286379.1;Name=WP_032286379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=AD12_RS17525;product=terminase ATPase subunit family protein;protein_id=WP_032286379.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 15202 16035 . + . ID=gene-AD12_RS17520;Name=AD12_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17520;old_locus_tag=AD12_1024 NZ_JJLK01000056.1 Protein Homology CDS 15202 16035 . + 0 ID=cds-WP_032286380.1;Parent=gene-AD12_RS17520;Dbxref=GenBank:WP_032286380.1;Name=WP_032286380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226021.1;locus_tag=AD12_RS17520;product=GPO family capsid scaffolding protein;protein_id=WP_032286380.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 16052 17110 . + . ID=gene-AD12_RS17515;Name=AD12_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17515;old_locus_tag=AD12_1025 NZ_JJLK01000056.1 Protein Homology CDS 16052 17110 . + 0 ID=cds-WP_032286381.1;Parent=gene-AD12_RS17515;Dbxref=GenBank:WP_032286381.1;Name=WP_032286381.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226022.1;locus_tag=AD12_RS17515;product=phage major capsid protein%2C P2 family;protein_id=WP_032286381.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 17114 17764 . + . ID=gene-AD12_RS17510;Name=AD12_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17510;old_locus_tag=AD12_1026 NZ_JJLK01000056.1 Protein Homology CDS 17114 17764 . + 0 ID=cds-WP_032286382.1;Parent=gene-AD12_RS17510;Dbxref=GenBank:WP_032286382.1;Name=WP_032286382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226023.1;locus_tag=AD12_RS17510;product=terminase endonuclease subunit;protein_id=WP_032286382.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 17860 18324 . + . ID=gene-AD12_RS17505;Name=AD12_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17505;old_locus_tag=AD12_1027 NZ_JJLK01000056.1 Protein Homology CDS 17860 18324 . + 0 ID=cds-WP_000673523.1;Parent=gene-AD12_RS17505;Dbxref=GenBank:WP_000673523.1;Name=WP_000673523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226024.1;locus_tag=AD12_RS17505;product=head completion/stabilization protein;protein_id=WP_000673523.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 18324 18527 . + . ID=gene-AD12_RS17500;Name=AD12_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17500;old_locus_tag=AD12_1028 NZ_JJLK01000056.1 Protein Homology CDS 18324 18527 . + 0 ID=cds-WP_000868175.1;Parent=gene-AD12_RS17500;Dbxref=GenBank:WP_000868175.1;Name=WP_000868175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=AD12_RS17500;product=tail protein X;protein_id=WP_000868175.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 18531 18746 . + . ID=gene-AD12_RS17495;Name=AD12_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17495;old_locus_tag=AD12_1029 NZ_JJLK01000056.1 Protein Homology CDS 18531 18746 . + 0 ID=cds-WP_000171568.1;Parent=gene-AD12_RS17495;Dbxref=GenBank:WP_000171568.1;Name=WP_000171568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=AD12_RS17495;product=HP1 family phage holin;protein_id=WP_000171568.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 18727 19239 . + . ID=gene-AD12_RS17490;Name=AD12_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17490;old_locus_tag=AD12_1030 NZ_JJLK01000056.1 Protein Homology CDS 18727 19239 . + 0 ID=cds-WP_001069905.1;Parent=gene-AD12_RS17490;Dbxref=GenBank:WP_001069905.1;Name=WP_001069905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069913.1;locus_tag=AD12_RS17490;product=lysozyme;protein_id=WP_001069905.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 19241 19618 . + . ID=gene-AD12_RS17485;Name=AD12_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17485;old_locus_tag=AD12_1031 NZ_JJLK01000056.1 Protein Homology CDS 19241 19618 . + 0 ID=cds-WP_032286383.1;Parent=gene-AD12_RS17485;Dbxref=GenBank:WP_032286383.1;Name=WP_032286383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730949.1;locus_tag=AD12_RS17485;product=DNZ54_00345 family protein;protein_id=WP_032286383.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 19615 20043 . + . ID=gene-AD12_RS29480;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=AD12_RS29480;old_locus_tag=AD12_1032 NZ_JJLK01000056.1 Protein Homology CDS 19615 20043 . + 0 ID=cds-WP_023563717.1;Parent=gene-AD12_RS29480;Dbxref=GenBank:WP_023563717.1;Name=WP_023563717.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341071.1;locus_tag=AD12_RS29480;product=Rz-like lysis system protein LysB;protein_id=WP_023563717.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 19928 20176 . + . ID=gene-AD12_RS29230;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD12_RS29230;old_locus_tag=AD12_1033 NZ_JJLK01000056.1 Protein Homology CDS 19928 20176 . + 0 ID=cds-WP_223931488.1;Parent=gene-AD12_RS29230;Dbxref=GenBank:WP_223931488.1;Name=WP_223931488.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=AD12_RS29230;product=Rz1-like lysis system protein LysC;protein_id=WP_223931488.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 20139 20570 . + . ID=gene-AD12_RS17475;Name=AD12_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17475;old_locus_tag=AD12_1034 NZ_JJLK01000056.1 Protein Homology CDS 20139 20570 . + 0 ID=cds-WP_001039945.1;Parent=gene-AD12_RS17475;Dbxref=GenBank:WP_001039945.1;Name=WP_001039945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=AD12_RS17475;product=phage tail protein;protein_id=WP_001039945.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 20563 21009 . + . ID=gene-AD12_RS17470;Name=AD12_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17470;old_locus_tag=AD12_1035 NZ_JJLK01000056.1 Protein Homology CDS 20563 21009 . + 0 ID=cds-WP_032286384.1;Parent=gene-AD12_RS17470;Dbxref=GenBank:WP_032286384.1;Name=WP_032286384.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461639.1;locus_tag=AD12_RS17470;product=phage virion morphogenesis protein;protein_id=WP_032286384.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 21078 21656 . + . ID=gene-AD12_RS17465;Name=AD12_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17465;old_locus_tag=AD12_1036 NZ_JJLK01000056.1 Protein Homology CDS 21078 21656 . + 0 ID=cds-WP_032286385.1;Parent=gene-AD12_RS17465;Dbxref=GenBank:WP_032286385.1;Name=WP_032286385.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552634.1;locus_tag=AD12_RS17465;product=phage baseplate assembly protein V;protein_id=WP_032286385.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 21653 22012 . + . ID=gene-AD12_RS17460;Name=AD12_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17460;old_locus_tag=AD12_1037 NZ_JJLK01000056.1 Protein Homology CDS 21653 22012 . + 0 ID=cds-WP_032286386.1;Parent=gene-AD12_RS17460;Dbxref=GenBank:WP_032286386.1;Name=WP_032286386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098787.1;locus_tag=AD12_RS17460;product=GPW/gp25 family protein;protein_id=WP_032286386.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 21999 22907 . + . ID=gene-AD12_RS17455;Name=AD12_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17455;old_locus_tag=AD12_1038 NZ_JJLK01000056.1 Protein Homology CDS 21999 22907 . + 0 ID=cds-WP_032286387.1;Parent=gene-AD12_RS17455;Dbxref=GenBank:WP_032286387.1;Name=WP_032286387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=AD12_RS17455;product=baseplate assembly protein;protein_id=WP_032286387.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 22900 23505 . + . ID=gene-AD12_RS17450;Name=AD12_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17450;old_locus_tag=AD12_1039 NZ_JJLK01000056.1 Protein Homology CDS 22900 23505 . + 0 ID=cds-WP_001086834.1;Parent=gene-AD12_RS17450;Dbxref=GenBank:WP_001086834.1;Name=WP_001086834.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=AD12_RS17450;product=phage tail protein I;protein_id=WP_001086834.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 23502 25925 . + . ID=gene-AD12_RS29175;Name=AD12_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29175;old_locus_tag=AD12_1040 NZ_JJLK01000056.1 Protein Homology CDS 23502 25925 . + 0 ID=cds-WP_032286388.1;Parent=gene-AD12_RS29175;Dbxref=GenBank:WP_032286388.1;Name=WP_032286388.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216969.1;locus_tag=AD12_RS29175;product=tail fiber protein;protein_id=WP_032286388.1;transl_table=11 NZ_JJLK01000056.1 RefSeq pseudogene 25985 26326 . + . ID=gene-AD12_RS17440;Name=AD12_RS17440;end_range=26326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS17440;old_locus_tag=AD12_1041;partial=true;pseudo=true;start_range=.,25985 NZ_JJLK01000056.1 Protein Homology CDS 25985 26326 . + 0 ID=cds-AD12_RS17440;Parent=gene-AD12_RS17440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=26326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554845.1;locus_tag=AD12_RS17440;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,25985;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 26445 27617 . + . ID=gene-AD12_RS17435;Name=AD12_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17435;old_locus_tag=AD12_1042 NZ_JJLK01000056.1 Protein Homology CDS 26445 27617 . + 0 ID=cds-WP_000046131.1;Parent=gene-AD12_RS17435;Dbxref=GenBank:WP_000046131.1;Name=WP_000046131.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=AD12_RS17435;product=phage tail sheath protein;protein_id=WP_000046131.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 27627 28142 . + . ID=gene-AD12_RS17430;Name=AD12_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17430;old_locus_tag=AD12_1043 NZ_JJLK01000056.1 Protein Homology CDS 27627 28142 . + 0 ID=cds-WP_001207660.1;Parent=gene-AD12_RS17430;Dbxref=GenBank:WP_001207660.1;Name=WP_001207660.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=AD12_RS17430;product=phage major tail tube protein;protein_id=WP_001207660.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 28197 28499 . + . ID=gene-AD12_RS17425;Name=AD12_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17425;old_locus_tag=AD12_1044 NZ_JJLK01000056.1 Protein Homology CDS 28197 28499 . + 0 ID=cds-WP_001281016.1;Parent=gene-AD12_RS17425;Dbxref=GenBank:WP_001281016.1;Name=WP_001281016.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=AD12_RS17425;product=phage tail assembly protein;protein_id=WP_001281016.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 28514 28633 . + . ID=gene-AD12_RS17420;Name=AD12_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17420;old_locus_tag=AD12_1045 NZ_JJLK01000056.1 Protein Homology CDS 28514 28633 . + 0 ID=cds-WP_000763311.1;Parent=gene-AD12_RS17420;Dbxref=GenBank:WP_000763311.1;Name=WP_000763311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226046.1;locus_tag=AD12_RS17420;product=GpE family phage tail protein;protein_id=WP_000763311.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 28626 31703 . + . ID=gene-AD12_RS17415;Name=AD12_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17415;old_locus_tag=AD12_1046 NZ_JJLK01000056.1 Protein Homology CDS 28626 31703 . + 0 ID=cds-WP_032286390.1;Parent=gene-AD12_RS17415;Dbxref=GenBank:WP_032286390.1;Name=WP_032286390.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282780.1;locus_tag=AD12_RS17415;product=phage tail tape measure protein;protein_id=WP_032286390.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 31700 32185 . + . ID=gene-AD12_RS17410;Name=AD12_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17410;old_locus_tag=AD12_1047 NZ_JJLK01000056.1 Protein Homology CDS 31700 32185 . + 0 ID=cds-WP_000980415.1;Parent=gene-AD12_RS17410;Dbxref=GenBank:WP_000980415.1;Name=WP_000980415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226049.1;locus_tag=AD12_RS17410;product=phage tail protein;protein_id=WP_000980415.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 32182 33282 . + . ID=gene-AD12_RS17405;Name=AD12_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17405;old_locus_tag=AD12_1048 NZ_JJLK01000056.1 Protein Homology CDS 32182 33282 . + 0 ID=cds-WP_032286391.1;Parent=gene-AD12_RS17405;Dbxref=GenBank:WP_032286391.1;Name=WP_032286391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226050.1;locus_tag=AD12_RS17405;product=phage late control D family protein;protein_id=WP_032286391.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 33373 33591 . + . ID=gene-AD12_RS17400;Name=AD12_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS17400;old_locus_tag=AD12_1049 NZ_JJLK01000056.1 Protein Homology CDS 33373 33591 . + 0 ID=cds-WP_000972391.1-2;Parent=gene-AD12_RS17400;Dbxref=GenBank:WP_000972391.1;Name=WP_000972391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504085.1;locus_tag=AD12_RS17400;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000972391.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 33827 35512 . - . ID=gene-AD12_RS17395;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AD12_RS17395;old_locus_tag=AD12_1050 NZ_JJLK01000056.1 Protein Homology CDS 33827 35512 . - 0 ID=cds-WP_001024876.1;Parent=gene-AD12_RS17395;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AD12_RS17395;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 35782 36159 . + . ID=gene-AD12_RS17390;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AD12_RS17390;old_locus_tag=AD12_1051 NZ_JJLK01000056.1 Protein Homology CDS 35782 36159 . + 0 ID=cds-WP_000681108.1;Parent=gene-AD12_RS17390;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AD12_RS17390;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 36189 36446 . - . ID=gene-AD12_RS17385;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AD12_RS17385;old_locus_tag=AD12_1052 NZ_JJLK01000056.1 Protein Homology CDS 36189 36446 . - 0 ID=cds-WP_001195240.1;Parent=gene-AD12_RS17385;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AD12_RS17385;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 36606 36893 . + . ID=gene-AD12_RS17380;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AD12_RS17380;old_locus_tag=AD12_1053 NZ_JJLK01000056.1 Protein Homology CDS 36606 36893 . + 0 ID=cds-WP_001201560.1;Parent=gene-AD12_RS17380;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AD12_RS17380;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 36877 37599 . + . ID=gene-AD12_RS17375;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AD12_RS17375;old_locus_tag=AD12_1054 NZ_JJLK01000056.1 Protein Homology CDS 36877 37599 . + 0 ID=cds-WP_032188148.1;Parent=gene-AD12_RS17375;Dbxref=GenBank:WP_032188148.1;Name=WP_032188148.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AD12_RS17375;product=nitroreductase NfsA;protein_id=WP_032188148.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 37660 38562 . + . ID=gene-AD12_RS17370;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AD12_RS17370;old_locus_tag=AD12_1055 NZ_JJLK01000056.1 Protein Homology CDS 37660 38562 . + 0 ID=cds-WP_000684321.1;Parent=gene-AD12_RS17370;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AD12_RS17370;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 38650 39126 . + . ID=gene-AD12_RS17365;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AD12_RS17365;old_locus_tag=AD12_1056 NZ_JJLK01000056.1 Protein Homology CDS 38650 39126 . + 0 ID=cds-WP_000203025.1;Parent=gene-AD12_RS17365;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AD12_RS17365;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 39477 40589 . + . ID=gene-AD12_RS17360;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AD12_RS17360;old_locus_tag=AD12_1058 NZ_JJLK01000056.1 Protein Homology CDS 39477 40589 . + 0 ID=cds-WP_000126053.1;Parent=gene-AD12_RS17360;Dbxref=GenBank:WP_000126053.1;Name=WP_000126053.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AD12_RS17360;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126053.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 40684 41817 . + . ID=gene-AD12_RS17355;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AD12_RS17355;old_locus_tag=AD12_1059 NZ_JJLK01000056.1 Protein Homology CDS 40684 41817 . + 0 ID=cds-WP_000995994.1;Parent=gene-AD12_RS17355;Dbxref=GenBank:WP_000995994.1;Name=WP_000995994.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AD12_RS17355;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000995994.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 41827 42780 . + . ID=gene-AD12_RS17350;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AD12_RS17350;old_locus_tag=AD12_1060 NZ_JJLK01000056.1 Protein Homology CDS 41827 42780 . + 0 ID=cds-WP_001093864.1;Parent=gene-AD12_RS17350;Dbxref=GenBank:WP_001093864.1;Name=WP_001093864.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706736.1;locus_tag=AD12_RS17350;product=putrescine ABC transporter permease PotH;protein_id=WP_001093864.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 42777 43622 . + . ID=gene-AD12_RS17345;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AD12_RS17345;old_locus_tag=AD12_1061 NZ_JJLK01000056.1 Protein Homology CDS 42777 43622 . + 0 ID=cds-WP_001061657.1;Parent=gene-AD12_RS17345;Dbxref=GenBank:WP_001061657.1;Name=WP_001061657.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AD12_RS17345;product=putrescine ABC transporter permease PotI;protein_id=WP_001061657.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 43682 44170 . + . ID=gene-AD12_RS17340;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AD12_RS17340;old_locus_tag=AD12_1062 NZ_JJLK01000056.1 Protein Homology CDS 43682 44170 . + 0 ID=cds-WP_000389260.1;Parent=gene-AD12_RS17340;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AD12_RS17340;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 44211 45338 . + . ID=gene-AD12_RS17335;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AD12_RS17335;old_locus_tag=AD12_1063 NZ_JJLK01000056.1 Protein Homology CDS 44211 45338 . + 0 ID=cds-WP_001149732.1;Parent=gene-AD12_RS17335;Dbxref=GenBank:WP_001149732.1;Name=WP_001149732.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706739.1;locus_tag=AD12_RS17335;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149732.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 45513 46244 . - . ID=gene-AD12_RS17330;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AD12_RS17330;old_locus_tag=AD12_1064 NZ_JJLK01000056.1 Protein Homology CDS 45513 46244 . - 0 ID=cds-WP_001295905.1;Parent=gene-AD12_RS17330;Dbxref=GenBank:WP_001295905.1;Name=WP_001295905.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AD12_RS17330;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295905.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 46536 47204 . - . ID=gene-AD12_RS17325;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AD12_RS17325;old_locus_tag=AD12_1065 NZ_JJLK01000056.1 Protein Homology CDS 46536 47204 . - 0 ID=cds-WP_000464491.1;Parent=gene-AD12_RS17325;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AD12_RS17325;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 47204 47920 . - . ID=gene-AD12_RS17320;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AD12_RS17320;old_locus_tag=AD12_1066 NZ_JJLK01000056.1 Protein Homology CDS 47204 47920 . - 0 ID=cds-WP_001001691.1;Parent=gene-AD12_RS17320;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AD12_RS17320;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 47927 48658 . - . ID=gene-AD12_RS17315;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AD12_RS17315;old_locus_tag=AD12_1067 NZ_JJLK01000056.1 Protein Homology CDS 47927 48658 . - 0 ID=cds-WP_000756569.1;Parent=gene-AD12_RS17315;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AD12_RS17315;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 48676 49404 . - . ID=gene-AD12_RS17310;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AD12_RS17310;old_locus_tag=AD12_1068 NZ_JJLK01000056.1 Protein Homology CDS 48676 49404 . - 0 ID=cds-WP_000027205.1;Parent=gene-AD12_RS17310;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AD12_RS17310;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 49622 50137 . - . ID=gene-AD12_RS17305;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AD12_RS17305;old_locus_tag=AD12_1069 NZ_JJLK01000056.1 Protein Homology CDS 49622 50137 . - 0 ID=cds-WP_001270738.1;Parent=gene-AD12_RS17305;Dbxref=GenBank:WP_001270738.1;Name=WP_001270738.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AD12_RS17305;product=lipoprotein;protein_id=WP_001270738.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 50263 50586 . + . ID=gene-AD12_RS17300;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AD12_RS17300;old_locus_tag=AD12_1070 NZ_JJLK01000056.1 Protein Homology CDS 50263 50586 . + 0 ID=cds-WP_001160737.1;Parent=gene-AD12_RS17300;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AD12_RS17300;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 50583 51413 . + . ID=gene-AD12_RS17295;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AD12_RS17295;old_locus_tag=AD12_1071 NZ_JJLK01000056.1 Protein Homology CDS 50583 51413 . + 0 ID=cds-WP_001255167.1;Parent=gene-AD12_RS17295;Dbxref=GenBank:WP_001255167.1;Name=WP_001255167.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AD12_RS17295;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255167.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 51410 52423 . - . ID=gene-AD12_RS17290;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AD12_RS17290;old_locus_tag=AD12_1072 NZ_JJLK01000056.1 Protein Homology CDS 51410 52423 . - 0 ID=cds-WP_001338420.1;Parent=gene-AD12_RS17290;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AD12_RS17290;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 52522 53952 . - . ID=gene-AD12_RS17285;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AD12_RS17285;old_locus_tag=AD12_1073 NZ_JJLK01000056.1 Protein Homology CDS 52522 53952 . - 0 ID=cds-WP_001136554.1;Parent=gene-AD12_RS17285;Dbxref=GenBank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AD12_RS17285;product=SDR family oxidoreductase;protein_id=WP_001136554.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 53963 54964 . - . ID=gene-AD12_RS17280;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AD12_RS17280;old_locus_tag=AD12_1074 NZ_JJLK01000056.1 Protein Homology CDS 53963 54964 . - 0 ID=cds-WP_032286392.1;Parent=gene-AD12_RS17280;Dbxref=GenBank:WP_032286392.1;Name=WP_032286392.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=AD12_RS17280;product=low-specificity L-threonine aldolase;protein_id=WP_032286392.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 55001 56719 . - . ID=gene-AD12_RS17275;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AD12_RS17275;old_locus_tag=AD12_1075 NZ_JJLK01000056.1 Protein Homology CDS 55001 56719 . - 0 ID=cds-WP_001692595.1;Parent=gene-AD12_RS17275;Dbxref=GenBank:WP_001692595.1;Name=WP_001692595.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AD12_RS17275;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_001692595.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 56852 57820 . - . ID=gene-AD12_RS17270;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AD12_RS17270;old_locus_tag=AD12_1076 NZ_JJLK01000056.1 Protein Homology CDS 56852 57820 . - 0 ID=cds-WP_000178677.1;Parent=gene-AD12_RS17270;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AD12_RS17270;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 57832 59484 . - . ID=gene-AD12_RS17265;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AD12_RS17265;old_locus_tag=AD12_1077 NZ_JJLK01000056.1 Protein Homology CDS 57832 59484 . - 0 ID=cds-WP_000458817.1;Parent=gene-AD12_RS17265;Dbxref=GenBank:WP_000458817.1;Name=WP_000458817.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AD12_RS17265;product=hydroxylamine reductase;protein_id=WP_000458817.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 59628 60527 . - . ID=gene-AD12_RS17260;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AD12_RS17260;old_locus_tag=AD12_1078 NZ_JJLK01000056.1 Protein Homology CDS 59628 60527 . - 0 ID=cds-WP_000491142.1;Parent=gene-AD12_RS17260;Dbxref=GenBank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AD12_RS17260;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 61022 61717 . - . ID=gene-AD12_RS17255;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AD12_RS17255;old_locus_tag=AD12_1079 NZ_JJLK01000056.1 Protein Homology CDS 61022 61717 . - 0 ID=cds-WP_001297311.1;Parent=gene-AD12_RS17255;Dbxref=GenBank:WP_001297311.1;Name=WP_001297311.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AD12_RS17255;product=aquaporin Z;protein_id=WP_001297311.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 62143 63801 . + . ID=gene-AD12_RS17250;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AD12_RS17250;old_locus_tag=AD12_1080 NZ_JJLK01000056.1 Protein Homology CDS 62143 63801 . + 0 ID=cds-WP_032286393.1;Parent=gene-AD12_RS17250;Dbxref=GenBank:WP_032286393.1;Name=WP_032286393.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=AD12_RS17250;product=ATP-dependent endonuclease;protein_id=WP_032286393.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 63798 64754 . - . ID=gene-AD12_RS17245;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AD12_RS17245;old_locus_tag=AD12_1081 NZ_JJLK01000056.1 Protein Homology CDS 63798 64754 . - 0 ID=cds-WP_001355621.1;Parent=gene-AD12_RS17245;Dbxref=GenBank:WP_001355621.1;Name=WP_001355621.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AD12_RS17245;product=VirK/YbjX family protein;protein_id=WP_001355621.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 64905 66020 . + . ID=gene-AD12_RS0123505;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AD12_RS0123505;old_locus_tag=AD12_1083 NZ_JJLK01000056.1 Protein Homology CDS 64905 66020 . + 0 ID=cds-WP_000746468.1;Parent=gene-AD12_RS0123505;Dbxref=GenBank:WP_000746468.1;Name=WP_000746468.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=AD12_RS0123505;product=macrolide transporter subunit MacA;protein_id=WP_000746468.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 66017 67963 . + . ID=gene-AD12_RS17240;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AD12_RS17240;old_locus_tag=AD12_1084 NZ_JJLK01000056.1 Protein Homology CDS 66017 67963 . + 0 ID=cds-WP_000188182.1;Parent=gene-AD12_RS17240;Dbxref=GenBank:WP_000188182.1;Name=WP_000188182.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=AD12_RS17240;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000188182.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 68036 68260 . - . ID=gene-AD12_RS17235;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AD12_RS17235;old_locus_tag=AD12_1085 NZ_JJLK01000056.1 Protein Homology CDS 68036 68260 . - 0 ID=cds-WP_000410785.1;Parent=gene-AD12_RS17235;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AD12_RS17235;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 68410 68484 . + . ID=gene-AD12_RS29235;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AD12_RS29235 NZ_JJLK01000056.1 Protein Homology CDS 68410 68484 . + 0 ID=cds-WP_001406719.1;Parent=gene-AD12_RS29235;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AD12_RS29235;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 68583 68903 . + . ID=gene-AD12_RS17230;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AD12_RS17230;old_locus_tag=AD12_1086 NZ_JJLK01000056.1 Protein Homology CDS 68583 68903 . + 0 ID=cds-WP_000520781.1;Parent=gene-AD12_RS17230;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AD12_RS17230;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 68934 71210 . + . ID=gene-AD12_RS17225;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AD12_RS17225;old_locus_tag=AD12_1087 NZ_JJLK01000056.1 Protein Homology CDS 68934 71210 . + 0 ID=cds-WP_000934041.1;Parent=gene-AD12_RS17225;Dbxref=GenBank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AD12_RS17225;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 71554 71641 . - . ID=gene-AD12_RS17220;Name=AD12_RS17220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS17220;old_locus_tag=AD12_1088 NZ_JJLK01000056.1 tRNAscan-SE tRNA 71554 71641 . - . ID=rna-AD12_RS17220;Parent=gene-AD12_RS17220;anticodon=(pos:complement(71605..71607));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS17220;product=tRNA-Ser NZ_JJLK01000056.1 tRNAscan-SE exon 71554 71641 . - . ID=exon-AD12_RS17220-1;Parent=rna-AD12_RS17220;anticodon=(pos:complement(71605..71607));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS17220;product=tRNA-Ser NZ_JJLK01000056.1 RefSeq gene 71895 72113 . - . ID=gene-AD12_RS17215;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AD12_RS17215;old_locus_tag=AD12_1089 NZ_JJLK01000056.1 Protein Homology CDS 71895 72113 . - 0 ID=cds-WP_001040187.1;Parent=gene-AD12_RS17215;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AD12_RS17215;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 72398 73102 . - . ID=gene-AD12_RS17210;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AD12_RS17210;old_locus_tag=AD12_1090 NZ_JJLK01000056.1 Protein Homology CDS 72398 73102 . - 0 ID=cds-WP_001241678.1;Parent=gene-AD12_RS17210;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AD12_RS17210;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 73144 74865 . - . ID=gene-AD12_RS17205;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AD12_RS17205;old_locus_tag=AD12_1091 NZ_JJLK01000056.1 Protein Homology CDS 73144 74865 . - 0 ID=cds-WP_001202188.1;Parent=gene-AD12_RS17205;Dbxref=GenBank:WP_001202188.1;Name=WP_001202188.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AD12_RS17205;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202188.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 74866 76632 . - . ID=gene-AD12_RS17200;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AD12_RS17200;old_locus_tag=AD12_1092 NZ_JJLK01000056.1 Protein Homology CDS 74866 76632 . - 0 ID=cds-WP_001043619.1;Parent=gene-AD12_RS17200;Dbxref=GenBank:WP_001043619.1;Name=WP_001043619.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308999.1;locus_tag=AD12_RS17200;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043619.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 76755 77720 . - . ID=gene-AD12_RS17195;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AD12_RS17195;old_locus_tag=AD12_1093 NZ_JJLK01000056.1 Protein Homology CDS 76755 77720 . - 0 ID=cds-WP_000537418.1;Parent=gene-AD12_RS17195;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AD12_RS17195;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 78264 78758 . + . ID=gene-AD12_RS17190;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AD12_RS17190;old_locus_tag=AD12_1095 NZ_JJLK01000056.1 Protein Homology CDS 78264 78758 . + 0 ID=cds-WP_000228473.1;Parent=gene-AD12_RS17190;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AD12_RS17190;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 78893 82999 . + . ID=gene-AD12_RS17185;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AD12_RS17185;old_locus_tag=AD12_1096 NZ_JJLK01000056.1 Protein Homology CDS 78893 82999 . + 0 ID=cds-WP_000077063.1;Parent=gene-AD12_RS17185;Dbxref=GenBank:WP_000077063.1;Name=WP_000077063.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AD12_RS17185;product=DNA translocase FtsK;protein_id=WP_000077063.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 83154 83765 . + . ID=gene-AD12_RS17180;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AD12_RS17180;old_locus_tag=AD12_1097 NZ_JJLK01000056.1 Protein Homology CDS 83154 83765 . + 0 ID=cds-WP_001295343.1;Parent=gene-AD12_RS17180;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AD12_RS17180;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 83776 85119 . + . ID=gene-AD12_RS17175;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AD12_RS17175;old_locus_tag=AD12_1098 NZ_JJLK01000056.1 Protein Homology CDS 83776 85119 . + 0 ID=cds-WP_000067755.1;Parent=gene-AD12_RS17175;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AD12_RS17175;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 85210 86502 . + . ID=gene-AD12_RS17170;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AD12_RS17170;old_locus_tag=AD12_1099 NZ_JJLK01000056.1 Protein Homology CDS 85210 86502 . + 0 ID=cds-WP_000886683.1;Parent=gene-AD12_RS17170;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AD12_RS17170;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 86741 89185 . + . ID=gene-AD12_RS17165;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AD12_RS17165;old_locus_tag=AD12_1100 NZ_JJLK01000056.1 Protein Homology CDS 86741 89185 . + 0 ID=cds-WP_032286394.1;Parent=gene-AD12_RS17165;Dbxref=GenBank:WP_032286394.1;Name=WP_032286394.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AD12_RS17165;product=dimethylsulfoxide reductase subunit A;protein_id=WP_032286394.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 89196 89813 . + . ID=gene-AD12_RS17160;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AD12_RS17160;old_locus_tag=AD12_1101 NZ_JJLK01000056.1 Protein Homology CDS 89196 89813 . + 0 ID=cds-WP_000213098.1;Parent=gene-AD12_RS17160;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD12_RS17160;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 89815 90678 . + . ID=gene-AD12_RS17155;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AD12_RS17155;old_locus_tag=AD12_1102 NZ_JJLK01000056.1 Protein Homology CDS 89815 90678 . + 0 ID=cds-WP_000534637.1;Parent=gene-AD12_RS17155;Dbxref=GenBank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AD12_RS17155;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534637.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 90714 91340 . - . ID=gene-AD12_RS17150;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AD12_RS17150;old_locus_tag=AD12_1103 NZ_JJLK01000056.1 Protein Homology CDS 90714 91340 . - 0 ID=cds-WP_000165880.1;Parent=gene-AD12_RS17150;Dbxref=GenBank:WP_000165880.1;Name=WP_000165880.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309009.1;locus_tag=AD12_RS17150;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165880.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 91654 92802 . + . ID=gene-AD12_RS17145;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AD12_RS17145;old_locus_tag=AD12_1105 NZ_JJLK01000056.1 Protein Homology CDS 91654 92802 . + 0 ID=cds-WP_000109295.1;Parent=gene-AD12_RS17145;Dbxref=GenBank:WP_000109295.1;Name=WP_000109295.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AD12_RS17145;product=MFS transporter;protein_id=WP_000109295.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 93012 94442 . + . ID=gene-AD12_RS17140;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AD12_RS17140;old_locus_tag=AD12_1106 NZ_JJLK01000056.1 Protein Homology CDS 93012 94442 . + 0 ID=cds-WP_000918536.1;Parent=gene-AD12_RS17140;Dbxref=GenBank:WP_000918536.1;Name=WP_000918536.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AD12_RS17140;product=APC family permease;protein_id=WP_000918536.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 94443 95351 . - . ID=gene-AD12_RS17135;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AD12_RS17135;old_locus_tag=AD12_1107 NZ_JJLK01000056.1 Protein Homology CDS 94443 95351 . - 0 ID=cds-WP_001242675.1;Parent=gene-AD12_RS17135;Dbxref=GenBank:WP_001242675.1;Name=WP_001242675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AD12_RS17135;product=LysR family transcriptional regulator;protein_id=WP_001242675.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 95451 96041 . + . ID=gene-AD12_RS17130;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=AD12_RS17130;old_locus_tag=AD12_1108 NZ_JJLK01000056.1 Protein Homology CDS 95451 96041 . + 0 ID=cds-WP_001190363.1;Parent=gene-AD12_RS17130;Dbxref=GenBank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AD12_RS17130;product=NAD(P)H oxidoreductase;protein_id=WP_001190363.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 96123 96863 . - . ID=gene-AD12_RS17125;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AD12_RS17125;old_locus_tag=AD12_1109 NZ_JJLK01000056.1 Protein Homology CDS 96123 96863 . - 0 ID=cds-WP_000111043.1;Parent=gene-AD12_RS17125;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AD12_RS17125;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 97055 99337 . - . ID=gene-AD12_RS17120;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AD12_RS17120;old_locus_tag=AD12_1110 NZ_JJLK01000056.1 Protein Homology CDS 97055 99337 . - 0 ID=cds-WP_001292815.1;Parent=gene-AD12_RS17120;Dbxref=GenBank:WP_001292815.1;Name=WP_001292815.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706821.1;locus_tag=AD12_RS17120;product=formate C-acetyltransferase;protein_id=WP_001292815.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 99392 100249 . - . ID=gene-AD12_RS28610;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AD12_RS28610;old_locus_tag=AD12_1111 NZ_JJLK01000056.1 Protein Homology CDS 99392 100249 . - 0 ID=cds-WP_000642546.1;Parent=gene-AD12_RS28610;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AD12_RS28610;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 100655 102415 . - . ID=gene-AD12_RS17110;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AD12_RS17110;old_locus_tag=AD12_1112 NZ_JJLK01000056.1 Protein Homology CDS 100655 102415 . - 0 ID=cds-WP_001297197.1;Parent=gene-AD12_RS17110;Dbxref=GenBank:WP_001297197.1;Name=WP_001297197.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AD12_RS17110;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001297197.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 102545 103237 . + . ID=gene-AD12_RS17105;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AD12_RS17105;old_locus_tag=AD12_1113 NZ_JJLK01000056.1 Protein Homology CDS 102545 103237 . + 0 ID=cds-WP_000642849.1;Parent=gene-AD12_RS17105;Dbxref=GenBank:WP_000642849.1;Name=WP_000642849.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AD12_RS17105;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 103436 104524 . + . ID=gene-AD12_RS17100;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AD12_RS17100;old_locus_tag=AD12_1114 NZ_JJLK01000056.1 Protein Homology CDS 103436 104524 . + 0 ID=cds-WP_000057147.1;Parent=gene-AD12_RS17100;Dbxref=GenBank:WP_000057147.1;Name=WP_000057147.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706825.1;locus_tag=AD12_RS17100;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057147.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 104595 105878 . + . ID=gene-AD12_RS17095;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AD12_RS17095;old_locus_tag=AD12_1115 NZ_JJLK01000056.1 Protein Homology CDS 104595 105878 . + 0 ID=cds-WP_000445231.1;Parent=gene-AD12_RS17095;Dbxref=GenBank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AD12_RS17095;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 106047 106811 . + . ID=gene-AD12_RS17090;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AD12_RS17090;old_locus_tag=AD12_1116 NZ_JJLK01000056.1 Protein Homology CDS 106047 106811 . + 0 ID=cds-WP_001295345.1;Parent=gene-AD12_RS17090;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AD12_RS17090;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 106984 107667 . + . ID=gene-AD12_RS17085;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AD12_RS17085;old_locus_tag=AD12_1117 NZ_JJLK01000056.1 Protein Homology CDS 106984 107667 . + 0 ID=cds-WP_000125016.1;Parent=gene-AD12_RS17085;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AD12_RS17085;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 107778 109451 . + . ID=gene-AD12_RS17080;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AD12_RS17080;old_locus_tag=AD12_1118 NZ_JJLK01000056.1 Protein Homology CDS 107778 109451 . + 0 ID=cds-WP_000140327.1;Parent=gene-AD12_RS17080;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AD12_RS17080;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 109611 109895 . + . ID=gene-AD12_RS17075;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AD12_RS17075;old_locus_tag=AD12_1119 NZ_JJLK01000056.1 Protein Homology CDS 109611 109895 . + 0 ID=cds-WP_000167336.1;Parent=gene-AD12_RS17075;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AD12_RS17075;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 110102 112366 . + . ID=gene-AD12_RS17070;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AD12_RS17070;old_locus_tag=AD12_1120 NZ_JJLK01000056.1 Protein Homology CDS 110102 112366 . + 0 ID=cds-WP_000705679.1;Parent=gene-AD12_RS17070;Dbxref=GenBank:WP_000705679.1;Name=WP_000705679.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AD12_RS17070;product=ComEC family protein;protein_id=WP_000705679.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 112403 114151 . + . ID=gene-AD12_RS17065;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AD12_RS17065;old_locus_tag=AD12_1121 NZ_JJLK01000056.1 Protein Homology CDS 112403 114151 . + 0 ID=cds-WP_000551270.1;Parent=gene-AD12_RS17065;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AD12_RS17065;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 114148 115134 . + . ID=gene-AD12_RS17060;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AD12_RS17060;old_locus_tag=AD12_1122 NZ_JJLK01000056.1 Protein Homology CDS 114148 115134 . + 0 ID=cds-WP_000570540.1;Parent=gene-AD12_RS17060;Dbxref=GenBank:WP_000570540.1;Name=WP_000570540.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706833.1;locus_tag=AD12_RS17060;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570540.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 115171 116403 . + . ID=gene-AD12_RS17055;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AD12_RS17055;old_locus_tag=AD12_1123 NZ_JJLK01000056.1 Protein Homology CDS 115171 116403 . + 0 ID=cds-WP_000056529.1;Parent=gene-AD12_RS17055;Dbxref=GenBank:WP_000056529.1;Name=WP_000056529.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706834.1;locus_tag=AD12_RS17055;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056529.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 116455 116637 . + . ID=gene-AD12_RS17050;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AD12_RS17050;old_locus_tag=AD12_1124 NZ_JJLK01000056.1 Protein Homology CDS 116455 116637 . + 0 ID=cds-WP_000350058.1;Parent=gene-AD12_RS17050;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AD12_RS17050;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 116634 117380 . + . ID=gene-AD12_RS17045;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AD12_RS17045;old_locus_tag=AD12_1125 NZ_JJLK01000056.1 Protein Homology CDS 116634 117380 . + 0 ID=cds-WP_000011616.1;Parent=gene-AD12_RS17045;Dbxref=GenBank:WP_000011616.1;Name=WP_000011616.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=AD12_RS17045;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011616.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 117534 118427 . + . ID=gene-AD12_RS17040;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AD12_RS17040;old_locus_tag=AD12_1126 NZ_JJLK01000056.1 Protein Homology CDS 117534 118427 . + 0 ID=cds-WP_000436922.1;Parent=gene-AD12_RS17040;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AD12_RS17040;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 118404 119183 . - . ID=gene-AD12_RS17035;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AD12_RS17035;old_locus_tag=AD12_1127 NZ_JJLK01000056.1 Protein Homology CDS 118404 119183 . - 0 ID=cds-WP_000899595.1;Parent=gene-AD12_RS17035;Dbxref=GenBank:WP_000899595.1;Name=WP_000899595.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706838.2;locus_tag=AD12_RS17035;product=envelope biogenesis factor ElyC;protein_id=WP_000899595.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 119319 120104 . + . ID=gene-AD12_RS17030;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AD12_RS17030;old_locus_tag=AD12_1128 NZ_JJLK01000056.1 Protein Homology CDS 119319 120104 . + 0 ID=cds-WP_001297198.1;Parent=gene-AD12_RS17030;Dbxref=GenBank:WP_001297198.1;Name=WP_001297198.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AD12_RS17030;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001297198.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 120101 121423 . + . ID=gene-AD12_RS17025;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AD12_RS17025;old_locus_tag=AD12_1129 NZ_JJLK01000056.1 Protein Homology CDS 120101 121423 . + 0 ID=cds-WP_001288850.1;Parent=gene-AD12_RS17025;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AD12_RS17025;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 121404 122108 . + . ID=gene-AD12_RS17020;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AD12_RS17020;old_locus_tag=AD12_1130 NZ_JJLK01000056.1 Protein Homology CDS 121404 122108 . + 0 ID=cds-WP_001295347.1;Parent=gene-AD12_RS17020;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AD12_RS17020;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 122108 126568 . + . ID=gene-AD12_RS17015;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AD12_RS17015;old_locus_tag=AD12_1131 NZ_JJLK01000056.1 Protein Homology CDS 122108 126568 . + 0 ID=cds-WP_000572668.1;Parent=gene-AD12_RS17015;Dbxref=GenBank:WP_000572668.1;Name=WP_000572668.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AD12_RS17015;product=chromosome partition protein MukB;protein_id=WP_000572668.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 126829 128676 . + . ID=gene-AD12_RS17010;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AD12_RS17010;old_locus_tag=AD12_1132 NZ_JJLK01000056.1 Protein Homology CDS 126829 128676 . + 0 ID=cds-WP_000925972.1;Parent=gene-AD12_RS17010;Dbxref=GenBank:WP_000925972.1;Name=WP_000925972.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AD12_RS17010;product=L%2CD-transpeptidase;protein_id=WP_000925972.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 128857 129405 . + . ID=gene-AD12_RS17005;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AD12_RS17005;old_locus_tag=AD12_1133 NZ_JJLK01000056.1 Protein Homology CDS 128857 129405 . + 0 ID=cds-WP_001295932.1;Parent=gene-AD12_RS17005;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AD12_RS17005;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 129432 130079 . + . ID=gene-AD12_RS17000;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AD12_RS17000;old_locus_tag=AD12_1134 NZ_JJLK01000056.1 Protein Homology CDS 129432 130079 . + 0 ID=cds-WP_001109487.1;Parent=gene-AD12_RS17000;Dbxref=GenBank:WP_001109487.1;Name=WP_001109487.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AD12_RS17000;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109487.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 130301 131491 . - . ID=gene-AD12_RS16995;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AD12_RS16995;old_locus_tag=AD12_1135 NZ_JJLK01000056.1 Protein Homology CDS 130301 131491 . - 0 ID=cds-WP_000462687.1;Parent=gene-AD12_RS16995;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AD12_RS16995;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 131676 132764 . - . ID=gene-AD12_RS16990;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AD12_RS16990;old_locus_tag=AD12_1136 NZ_JJLK01000056.1 Protein Homology CDS 131676 132764 . - 0 ID=cds-WP_000977920.1;Parent=gene-AD12_RS16990;Dbxref=GenBank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AD12_RS16990;product=porin OmpF;protein_id=WP_000977920.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 133366 134766 . - . ID=gene-AD12_RS16985;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AD12_RS16985;old_locus_tag=AD12_1138 NZ_JJLK01000056.1 Protein Homology CDS 133366 134766 . - 0 ID=cds-WP_000117881.1;Parent=gene-AD12_RS16985;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AD12_RS16985;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 134935 136137 . - . ID=gene-AD12_RS16980;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AD12_RS16980;old_locus_tag=AD12_1139 NZ_JJLK01000056.1 Protein Homology CDS 134935 136137 . - 0 ID=cds-WP_001297200.1;Parent=gene-AD12_RS16980;Dbxref=GenBank:WP_001297200.1;Name=WP_001297200.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706850.2;locus_tag=AD12_RS16980;product=nicotinate phosphoribosyltransferase;protein_id=WP_001297200.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 136403 139015 . + . ID=gene-AD12_RS16975;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AD12_RS16975;old_locus_tag=AD12_1141 NZ_JJLK01000056.1 Protein Homology CDS 136403 139015 . + 0 ID=cds-WP_000193859.1;Parent=gene-AD12_RS16975;Dbxref=GenBank:WP_000193859.1;Name=WP_000193859.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AD12_RS16975;product=aminopeptidase N;protein_id=WP_000193859.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 139222 139989 . - . ID=gene-AD12_RS16970;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AD12_RS16970;old_locus_tag=AD12_1142 NZ_JJLK01000056.1 Protein Homology CDS 139222 139989 . - 0 ID=cds-WP_001090514.1;Parent=gene-AD12_RS16970;Dbxref=GenBank:WP_001090514.1;Name=WP_001090514.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706852.1;locus_tag=AD12_RS16970;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090514.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 139986 140777 . - . ID=gene-AD12_RS16965;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AD12_RS16965;old_locus_tag=AD12_1143 NZ_JJLK01000056.1 Protein Homology CDS 139986 140777 . - 0 ID=cds-WP_000235203.1;Parent=gene-AD12_RS16965;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AD12_RS16965;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 140788 141933 . - . ID=gene-AD12_RS16960;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AD12_RS16960;old_locus_tag=AD12_1144 NZ_JJLK01000056.1 Protein Homology CDS 140788 141933 . - 0 ID=cds-WP_000055996.1;Parent=gene-AD12_RS16960;Dbxref=GenBank:WP_000055996.1;Name=WP_000055996.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706856.1;locus_tag=AD12_RS16960;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000055996.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 141930 142889 . - . ID=gene-AD12_RS16955;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AD12_RS16955;old_locus_tag=AD12_1145 NZ_JJLK01000056.1 Protein Homology CDS 141930 142889 . - 0 ID=cds-WP_032286395.1;Parent=gene-AD12_RS16955;Dbxref=GenBank:WP_032286395.1;Name=WP_032286395.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309046.1;locus_tag=AD12_RS16955;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_032286395.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 142882 143457 . - . ID=gene-AD12_RS16950;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AD12_RS16950;old_locus_tag=AD12_1146 NZ_JJLK01000056.1 Protein Homology CDS 142882 143457 . - 0 ID=cds-WP_001263933.1;Parent=gene-AD12_RS16950;Dbxref=GenBank:WP_001263933.1;Name=WP_001263933.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AD12_RS16950;product=NADPH-dependent FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 143813 144355 . + . ID=gene-AD12_RS16945;Name=AD12_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS16945;old_locus_tag=AD12_1147 NZ_JJLK01000056.1 Protein Homology CDS 143813 144355 . + 0 ID=cds-WP_000750284.1;Parent=gene-AD12_RS16945;Dbxref=GenBank:WP_000750284.1;Name=WP_000750284.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AD12_RS16945;product=fimbrial protein;protein_id=WP_000750284.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 144438 145139 . + . ID=gene-AD12_RS16940;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AD12_RS16940;old_locus_tag=AD12_1148 NZ_JJLK01000056.1 Protein Homology CDS 144438 145139 . + 0 ID=cds-WP_000845152.1;Parent=gene-AD12_RS16940;Dbxref=GenBank:WP_000845152.1;Name=WP_000845152.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AD12_RS16940;product=fimbrial biogenesis chaperone;protein_id=WP_000845152.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 145164 147764 . + . ID=gene-AD12_RS16935;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AD12_RS16935;old_locus_tag=AD12_1149 NZ_JJLK01000056.1 Protein Homology CDS 145164 147764 . + 0 ID=cds-WP_050480828.1;Parent=gene-AD12_RS16935;Dbxref=GenBank:WP_050480828.1;Name=WP_050480828.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706863.2;locus_tag=AD12_RS16935;product=fimbrial biogenesis usher protein;protein_id=WP_050480828.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 147755 148825 . + . ID=gene-AD12_RS16930;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AD12_RS16930;old_locus_tag=AD12_1150 NZ_JJLK01000056.1 Protein Homology CDS 147755 148825 . + 0 ID=cds-WP_001165655.1;Parent=gene-AD12_RS16930;Dbxref=GenBank:WP_001165655.1;Name=WP_001165655.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AD12_RS16930;product=fimbrial protein;protein_id=WP_001165655.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 148837 149379 . + . ID=gene-AD12_RS16925;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AD12_RS16925;old_locus_tag=AD12_1151 NZ_JJLK01000056.1 Protein Homology CDS 148837 149379 . + 0 ID=cds-WP_000730614.1;Parent=gene-AD12_RS16925;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AD12_RS16925;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 149387 149902 . + . ID=gene-AD12_RS16920;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AD12_RS16920;old_locus_tag=AD12_1152 NZ_JJLK01000056.1 Protein Homology CDS 149387 149902 . + 0 ID=cds-WP_000919480.1;Parent=gene-AD12_RS16920;Dbxref=GenBank:WP_000919480.1;Name=WP_000919480.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AD12_RS16920;product=fimbrial protein;protein_id=WP_000919480.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 149868 150605 . + . ID=gene-AD12_RS16915;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AD12_RS16915;old_locus_tag=AD12_1153 NZ_JJLK01000056.1 Protein Homology CDS 149868 150605 . + 0 ID=cds-WP_187439331.1;Parent=gene-AD12_RS16915;Dbxref=GenBank:WP_187439331.1;Name=WP_187439331.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AD12_RS16915;product=fimbrial chaperone;protein_id=WP_187439331.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 150716 151726 . + . ID=gene-AD12_RS16910;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AD12_RS16910;old_locus_tag=AD12_1154 NZ_JJLK01000056.1 Protein Homology CDS 150716 151726 . + 0 ID=cds-WP_001295352.1;Parent=gene-AD12_RS16910;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AD12_RS16910;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 151900 152442 . + . ID=gene-AD12_RS16905;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AD12_RS16905;old_locus_tag=AD12_1155 NZ_JJLK01000056.1 Protein Homology CDS 151900 152442 . + 0 ID=cds-WP_001295353.1;Parent=gene-AD12_RS16905;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AD12_RS16905;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 152439 153548 . - . ID=gene-AD12_RS16900;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AD12_RS16900;old_locus_tag=AD12_1156 NZ_JJLK01000056.1 Protein Homology CDS 152439 153548 . - 0 ID=cds-WP_032286398.1;Parent=gene-AD12_RS16900;Dbxref=GenBank:WP_032286398.1;Name=WP_032286398.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AD12_RS16900;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_032286398.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 153792 155900 . + . ID=gene-AD12_RS16895;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AD12_RS16895;old_locus_tag=AD12_1157 NZ_JJLK01000056.1 Protein Homology CDS 153792 155900 . + 0 ID=cds-WP_001086520.1;Parent=gene-AD12_RS16895;Dbxref=GenBank:WP_001086520.1;Name=WP_001086520.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309059.1;locus_tag=AD12_RS16895;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086520.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 155912 157819 . + . ID=gene-AD12_RS16890;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AD12_RS16890;old_locus_tag=AD12_1158 NZ_JJLK01000056.1 Protein Homology CDS 155912 157819 . + 0 ID=cds-WP_000053089.1;Parent=gene-AD12_RS16890;Dbxref=GenBank:WP_000053089.1;Name=WP_000053089.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AD12_RS16890;product=ABC transporter ATP-binding protein;protein_id=WP_000053089.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 157949 159202 . + . ID=gene-AD12_RS16885;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AD12_RS16885;old_locus_tag=AD12_1159 NZ_JJLK01000056.1 Protein Homology CDS 157949 159202 . + 0 ID=cds-WP_000333176.1;Parent=gene-AD12_RS16885;Dbxref=GenBank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AD12_RS16885;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 159207 160847 . + . ID=gene-AD12_RS16880;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AD12_RS16880;old_locus_tag=AD12_1160 NZ_JJLK01000056.1 Protein Homology CDS 159207 160847 . + 0 ID=cds-WP_000445535.1;Parent=gene-AD12_RS16880;Dbxref=GenBank:WP_000445535.1;Name=WP_000445535.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AD12_RS16880;product=intermembrane transport protein PqiB;protein_id=WP_000445535.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 160844 161407 . + . ID=gene-AD12_RS16875;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AD12_RS16875;old_locus_tag=AD12_1161 NZ_JJLK01000056.1 Protein Homology CDS 160844 161407 . + 0 ID=cds-WP_000759120.1;Parent=gene-AD12_RS16875;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AD12_RS16875;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 161663 161830 . + . ID=gene-AD12_RS0123515;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AD12_RS0123515 NZ_JJLK01000056.1 Protein Homology CDS 161663 161830 . + 0 ID=cds-WP_000828648.1;Parent=gene-AD12_RS0123515;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AD12_RS0123515;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 161900 162418 . - . ID=gene-AD12_RS16870;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AD12_RS16870;old_locus_tag=AD12_1162 NZ_JJLK01000056.1 Protein Homology CDS 161900 162418 . - 0 ID=cds-WP_000227927.1;Parent=gene-AD12_RS16870;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AD12_RS16870;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 162487 164247 . - . ID=gene-AD12_RS16865;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AD12_RS16865;old_locus_tag=AD12_1163 NZ_JJLK01000056.1 Protein Homology CDS 162487 164247 . - 0 ID=cds-WP_000156526.1;Parent=gene-AD12_RS16865;Dbxref=GenBank:WP_000156526.1;Name=WP_000156526.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309066.1;locus_tag=AD12_RS16865;product=AAA family ATPase;protein_id=WP_000156526.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 164433 164885 . + . ID=gene-AD12_RS16860;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AD12_RS16860;old_locus_tag=AD12_1164 NZ_JJLK01000056.1 Protein Homology CDS 164433 164885 . + 0 ID=cds-WP_000877161.1;Parent=gene-AD12_RS16860;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AD12_RS16860;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 164962 166014 . - . ID=gene-AD12_RS16855;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AD12_RS16855;old_locus_tag=AD12_1165 NZ_JJLK01000056.1 Protein Homology CDS 164962 166014 . - 0 ID=cds-WP_001361736.1;Parent=gene-AD12_RS16855;Dbxref=GenBank:WP_001361736.1;Name=WP_001361736.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706879.2;locus_tag=AD12_RS16855;product=porin OmpA;protein_id=WP_001361736.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 166371 166880 . - . ID=gene-AD12_RS16850;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AD12_RS16850;old_locus_tag=AD12_1166 NZ_JJLK01000056.1 Protein Homology CDS 166371 166880 . - 0 ID=cds-WP_000288710.1;Parent=gene-AD12_RS16850;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AD12_RS16850;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 167099 167728 . + . ID=gene-AD12_RS16845;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AD12_RS16845;old_locus_tag=AD12_1167 NZ_JJLK01000056.1 Protein Homology CDS 167099 167728 . + 0 ID=cds-WP_000839153.1;Parent=gene-AD12_RS16845;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AD12_RS16845;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 167691 169853 . - . ID=gene-AD12_RS16840;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AD12_RS16840;old_locus_tag=AD12_1168 NZ_JJLK01000056.1 Protein Homology CDS 167691 169853 . - 0 ID=cds-WP_000875023.1;Parent=gene-AD12_RS16840;Dbxref=GenBank:WP_000875023.1;Name=WP_000875023.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AD12_RS16840;product=YccS family putative transporter;protein_id=WP_000875023.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 169863 170309 . - . ID=gene-AD12_RS16835;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AD12_RS16835;old_locus_tag=AD12_1169 NZ_JJLK01000056.1 Protein Homology CDS 169863 170309 . - 0 ID=cds-WP_001261235.1;Parent=gene-AD12_RS16835;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AD12_RS16835;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 170432 172486 . + . ID=gene-AD12_RS16830;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AD12_RS16830;old_locus_tag=AD12_1170 NZ_JJLK01000056.1 Protein Homology CDS 170432 172486 . + 0 ID=cds-WP_000420536.1;Parent=gene-AD12_RS16830;Dbxref=GenBank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AD12_RS16830;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 172518 172976 . - . ID=gene-AD12_RS16825;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AD12_RS16825;old_locus_tag=AD12_1171 NZ_JJLK01000056.1 Protein Homology CDS 172518 172976 . - 0 ID=cds-WP_000424181.1;Parent=gene-AD12_RS16825;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AD12_RS16825;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 173072 173734 . - . ID=gene-AD12_RS16820;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AD12_RS16820;old_locus_tag=AD12_1172 NZ_JJLK01000056.1 Protein Homology CDS 173072 173734 . - 0 ID=cds-WP_000847791.1;Parent=gene-AD12_RS16820;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AD12_RS16820;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 173907 174320 . + . ID=gene-AD12_RS16815;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AD12_RS16815;old_locus_tag=AD12_1173 NZ_JJLK01000056.1 Protein Homology CDS 173907 174320 . + 0 ID=cds-WP_000665217.1;Parent=gene-AD12_RS16815;Dbxref=GenBank:WP_000665217.1;Name=WP_000665217.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=AD12_RS16815;product=CoA-binding protein;protein_id=WP_000665217.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 174365 174682 . - . ID=gene-AD12_RS16810;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AD12_RS16810;old_locus_tag=AD12_1174 NZ_JJLK01000056.1 Protein Homology CDS 174365 174682 . - 0 ID=cds-WP_001295356.1;Parent=gene-AD12_RS16810;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AD12_RS16810;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 174740 175930 . - . ID=gene-AD12_RS16805;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AD12_RS16805;old_locus_tag=AD12_1175 NZ_JJLK01000056.1 Protein Homology CDS 174740 175930 . - 0 ID=cds-WP_000116288.1;Parent=gene-AD12_RS16805;Dbxref=GenBank:WP_000116288.1;Name=WP_000116288.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AD12_RS16805;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116288.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 176025 176303 . + . ID=gene-AD12_RS16800;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AD12_RS16800;old_locus_tag=AD12_1176 NZ_JJLK01000056.1 Protein Homology CDS 176025 176303 . + 0 ID=cds-WP_001391370.1;Parent=gene-AD12_RS16800;Dbxref=GenBank:WP_001391370.1;Name=WP_001391370.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AD12_RS16800;product=acylphosphatase;protein_id=WP_001391370.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 176300 176629 . - . ID=gene-AD12_RS16795;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AD12_RS16795;old_locus_tag=AD12_1177 NZ_JJLK01000056.1 Protein Homology CDS 176300 176629 . - 0 ID=cds-WP_000904442.1;Parent=gene-AD12_RS16795;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AD12_RS16795;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 176720 177379 . - . ID=gene-AD12_RS16790;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AD12_RS16790;old_locus_tag=AD12_1178 NZ_JJLK01000056.1 Protein Homology CDS 176720 177379 . - 0 ID=cds-WP_000375136.1;Parent=gene-AD12_RS16790;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AD12_RS16790;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 177586 177673 . - . ID=gene-AD12_RS16785;Name=AD12_RS16785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS16785;old_locus_tag=AD12_1179 NZ_JJLK01000056.1 tRNAscan-SE tRNA 177586 177673 . - . ID=rna-AD12_RS16785;Parent=gene-AD12_RS16785;anticodon=(pos:complement(177637..177639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS16785;product=tRNA-Ser NZ_JJLK01000056.1 tRNAscan-SE exon 177586 177673 . - . ID=exon-AD12_RS16785-1;Parent=rna-AD12_RS16785;anticodon=(pos:complement(177637..177639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS16785;product=tRNA-Ser NZ_JJLK01000056.1 RefSeq gene 178100 179218 . + . ID=gene-AD12_RS16780;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AD12_RS16780;old_locus_tag=AD12_1180 NZ_JJLK01000056.1 Protein Homology CDS 178100 179218 . + 0 ID=cds-WP_001058320.1;Parent=gene-AD12_RS16780;Dbxref=GenBank:WP_001058320.1;Name=WP_001058320.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AD12_RS16780;product=hydrogenase 1 small subunit;protein_id=WP_001058320.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 179215 181008 . + . ID=gene-AD12_RS16775;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AD12_RS16775;old_locus_tag=AD12_1181 NZ_JJLK01000056.1 Protein Homology CDS 179215 181008 . + 0 ID=cds-WP_000107384.1;Parent=gene-AD12_RS16775;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AD12_RS16775;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 181027 181734 . + . ID=gene-AD12_RS16770;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AD12_RS16770;old_locus_tag=AD12_1182 NZ_JJLK01000056.1 Protein Homology CDS 181027 181734 . + 0 ID=cds-WP_001186424.1;Parent=gene-AD12_RS16770;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AD12_RS16770;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 181731 182318 . + . ID=gene-AD12_RS16765;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AD12_RS16765;old_locus_tag=AD12_1183 NZ_JJLK01000056.1 Protein Homology CDS 181731 182318 . + 0 ID=cds-WP_000003671.1;Parent=gene-AD12_RS16765;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AD12_RS16765;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 182315 182713 . + . ID=gene-AD12_RS16760;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AD12_RS16760;old_locus_tag=AD12_1184 NZ_JJLK01000056.1 Protein Homology CDS 182315 182713 . + 0 ID=cds-WP_000063974.1;Parent=gene-AD12_RS16760;Dbxref=GenBank:WP_000063974.1;Name=WP_000063974.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AD12_RS16760;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063974.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 182710 183567 . + . ID=gene-AD12_RS16755;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AD12_RS16755;old_locus_tag=AD12_1185 NZ_JJLK01000056.1 Protein Homology CDS 182710 183567 . + 0 ID=cds-WP_000004899.1;Parent=gene-AD12_RS16755;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AD12_RS16755;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 183701 185245 . + . ID=gene-AD12_RS16750;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AD12_RS16750;old_locus_tag=AD12_1186 NZ_JJLK01000056.1 Protein Homology CDS 183701 185245 . + 0 ID=cds-WP_000263575.1;Parent=gene-AD12_RS16750;Dbxref=GenBank:WP_000263575.1;Name=WP_000263575.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706901.2;locus_tag=AD12_RS16750;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263575.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 185257 186393 . + . ID=gene-AD12_RS16745;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AD12_RS16745;old_locus_tag=AD12_1187 NZ_JJLK01000056.1 Protein Homology CDS 185257 186393 . + 0 ID=cds-WP_000460777.1;Parent=gene-AD12_RS16745;Dbxref=GenBank:WP_000460777.1;Name=WP_000460777.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309162.1;locus_tag=AD12_RS16745;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460777.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 186406 186498 . + . ID=gene-AD12_RS0123530;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AD12_RS0123530 NZ_JJLK01000056.1 Protein Homology CDS 186406 186498 . + 0 ID=cds-WP_000270305.1;Parent=gene-AD12_RS0123530;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AD12_RS0123530;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 186578 187876 . + . ID=gene-AD12_RS16740;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AD12_RS16740;old_locus_tag=AD12_1188 NZ_JJLK01000056.1 Protein Homology CDS 186578 187876 . + 0 ID=cds-WP_001361723.1;Parent=gene-AD12_RS16740;Dbxref=GenBank:WP_001361723.1;Name=WP_001361723.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AD12_RS16740;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001361723.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 187996 190176 . - . ID=gene-AD12_RS16735;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AD12_RS16735;old_locus_tag=AD12_1189 NZ_JJLK01000056.1 Protein Homology CDS 187996 190176 . - 0 ID=cds-WP_000208665.1;Parent=gene-AD12_RS16735;Dbxref=GenBank:WP_000208665.1;Name=WP_000208665.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309164.1;locus_tag=AD12_RS16735;product=tyrosine-protein kinase;protein_id=WP_000208665.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 190196 190642 . - . ID=gene-AD12_RS16730;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AD12_RS16730;old_locus_tag=AD12_1190 NZ_JJLK01000056.1 Protein Homology CDS 190196 190642 . - 0 ID=cds-WP_000057871.1;Parent=gene-AD12_RS16730;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AD12_RS16730;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 190630 191769 . - . ID=gene-AD12_RS16725;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AD12_RS16725;old_locus_tag=AD12_1191 NZ_JJLK01000056.1 Protein Homology CDS 190630 191769 . - 0 ID=cds-WP_001295357.1;Parent=gene-AD12_RS16725;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AD12_RS16725;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 191815 193911 . - . ID=gene-AD12_RS16720;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AD12_RS16720;old_locus_tag=AD12_1192 NZ_JJLK01000056.1 Protein Homology CDS 191815 193911 . - 0 ID=cds-WP_000742305.1;Parent=gene-AD12_RS16720;Dbxref=GenBank:WP_000742305.1;Name=WP_000742305.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AD12_RS16720;product=YjbH domain-containing protein;protein_id=WP_000742305.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 193911 194657 . - . ID=gene-AD12_RS16715;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AD12_RS16715;old_locus_tag=AD12_1193 NZ_JJLK01000056.1 Protein Homology CDS 193911 194657 . - 0 ID=cds-WP_001038079.1;Parent=gene-AD12_RS16715;Dbxref=GenBank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AD12_RS16715;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 194654 195298 . - . ID=gene-AD12_RS16710;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AD12_RS16710;old_locus_tag=AD12_1194 NZ_JJLK01000056.1 Protein Homology CDS 194654 195298 . - 0 ID=cds-WP_001247610.1;Parent=gene-AD12_RS16710;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AD12_RS16710;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 195405 195710 . - . ID=gene-AD12_RS16705;Name=AD12_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS16705;old_locus_tag=AD12_1195 NZ_JJLK01000056.1 Protein Homology CDS 195405 195710 . - 0 ID=cds-WP_001299283.1;Parent=gene-AD12_RS16705;Dbxref=GenBank:WP_001299283.1;Name=WP_001299283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309170.2;locus_tag=AD12_RS16705;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001299283.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 196152 196364 . - . ID=gene-AD12_RS16700;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AD12_RS16700;old_locus_tag=AD12_1196 NZ_JJLK01000056.1 Protein Homology CDS 196152 196364 . - 0 ID=cds-WP_000087763.1;Parent=gene-AD12_RS16700;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AD12_RS16700;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 196650 196862 . + . ID=gene-AD12_RS16695;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AD12_RS16695;old_locus_tag=AD12_1197 NZ_JJLK01000056.1 Protein Homology CDS 196650 196862 . + 0 ID=cds-WP_000066490.1;Parent=gene-AD12_RS16695;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AD12_RS16695;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 196873 197061 . + . ID=gene-AD12_RS26455;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AD12_RS26455 NZ_JJLK01000056.1 Protein Homology CDS 196873 197061 . + 0 ID=cds-WP_071524879.1;Parent=gene-AD12_RS26455;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AD12_RS26455;product=cold shock small protein YmcF;protein_id=WP_071524879.1;transl_table=11 NZ_JJLK01000056.1 RefSeq pseudogene 197036 197265 . + . ID=gene-AD12_RS0123535;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=pseudogene;locus_tag=AD12_RS0123535;pseudo=true NZ_JJLK01000056.1 Protein Homology CDS 197036 197265 . + 0 ID=cds-AD12_RS0123535;Parent=gene-AD12_RS0123535;Note=frameshifted;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706913.1;locus_tag=AD12_RS0123535;product=protein YmcE;pseudo=true;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 197255 197428 . + . ID=gene-AD12_RS16690;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AD12_RS16690;old_locus_tag=AD12_1199 NZ_JJLK01000056.1 Protein Homology CDS 197255 197428 . + 0 ID=cds-WP_001019197.1;Parent=gene-AD12_RS16690;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AD12_RS16690;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 197477 198550 . - . ID=gene-AD12_RS16685;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AD12_RS16685;old_locus_tag=AD12_1200 NZ_JJLK01000056.1 Protein Homology CDS 197477 198550 . - 0 ID=cds-WP_000829660.1;Parent=gene-AD12_RS16685;Dbxref=GenBank:WP_000829660.1;Name=WP_000829660.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AD12_RS16685;product=4Fe-4S binding protein;protein_id=WP_000829660.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 198622 201366 . - . ID=gene-AD12_RS16680;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AD12_RS16680;old_locus_tag=AD12_1201 NZ_JJLK01000056.1 Protein Homology CDS 198622 201366 . - 0 ID=cds-WP_071586461.1;Parent=gene-AD12_RS16680;Dbxref=GenBank:WP_071586461.1;Name=WP_071586461.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AD12_RS16680;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071586461.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 201449 202477 . + . ID=gene-AD12_RS16675;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AD12_RS16675;old_locus_tag=AD12_1202 NZ_JJLK01000056.1 Protein Homology CDS 201449 202477 . + 0 ID=cds-WP_001264933.1;Parent=gene-AD12_RS16675;Dbxref=GenBank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AD12_RS16675;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 202450 203142 . - . ID=gene-AD12_RS16670;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AD12_RS16670;old_locus_tag=AD12_1203 NZ_JJLK01000056.1 Protein Homology CDS 202450 203142 . - 0 ID=cds-WP_001120112.1;Parent=gene-AD12_RS16670;Dbxref=GenBank:WP_001120112.1;Name=WP_001120112.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309177.1;locus_tag=AD12_RS16670;product=two-component system response regulator TorR;protein_id=WP_001120112.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 203272 204444 . + . ID=gene-AD12_RS16665;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AD12_RS16665;old_locus_tag=AD12_1204 NZ_JJLK01000056.1 Protein Homology CDS 203272 204444 . + 0 ID=cds-WP_032173411.1;Parent=gene-AD12_RS16665;Dbxref=GenBank:WP_032173411.1;Name=WP_032173411.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AD12_RS16665;product=pentaheme c-type cytochrome TorC;protein_id=WP_032173411.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 204444 206990 . + . ID=gene-AD12_RS16660;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AD12_RS16660;old_locus_tag=AD12_1205 NZ_JJLK01000056.1 Protein Homology CDS 204444 206990 . + 0 ID=cds-WP_001062101.1;Parent=gene-AD12_RS16660;Dbxref=GenBank:WP_001062101.1;Name=WP_001062101.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AD12_RS16660;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001062101.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 206987 207586 . + . ID=gene-AD12_RS16655;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AD12_RS16655;old_locus_tag=AD12_1206 NZ_JJLK01000056.1 Protein Homology CDS 206987 207586 . + 0 ID=cds-WP_000209869.1;Parent=gene-AD12_RS16655;Dbxref=GenBank:WP_000209869.1;Name=WP_000209869.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AD12_RS16655;product=molecular chaperone TorD;protein_id=WP_000209869.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 207679 207984 . - . ID=gene-AD12_RS16650;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AD12_RS16650;old_locus_tag=AD12_1207 NZ_JJLK01000056.1 Protein Homology CDS 207679 207984 . - 0 ID=cds-WP_000024560.1;Parent=gene-AD12_RS16650;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AD12_RS16650;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 207984 208904 . - . ID=gene-AD12_RS16645;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AD12_RS16645;old_locus_tag=AD12_1208 NZ_JJLK01000056.1 Protein Homology CDS 207984 208904 . - 0 ID=cds-WP_000420629.1;Parent=gene-AD12_RS16645;Dbxref=GenBank:WP_000420629.1;Name=WP_000420629.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AD12_RS16645;product=curved DNA-binding protein;protein_id=WP_000420629.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 209164 210423 . + . ID=gene-AD12_RS16640;Name=AD12_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS16640;old_locus_tag=AD12_1209 NZ_JJLK01000056.1 Protein Homology CDS 209164 210423 . + 0 ID=cds-WP_000097602.1;Parent=gene-AD12_RS16640;Dbxref=GenBank:WP_000097602.1;Name=WP_000097602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097604.1;locus_tag=AD12_RS16640;product=YccE family protein;protein_id=WP_000097602.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 210715 211956 . + . ID=gene-AD12_RS16635;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AD12_RS16635;old_locus_tag=AD12_1211 NZ_JJLK01000056.1 Protein Homology CDS 210715 211956 . + 0 ID=cds-WP_001044313.1;Parent=gene-AD12_RS16635;Dbxref=GenBank:WP_001044313.1;Name=WP_001044313.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AD12_RS16635;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044313.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 211994 212221 . - . ID=gene-AD12_RS16630;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AD12_RS16630;old_locus_tag=AD12_1212 NZ_JJLK01000056.1 Protein Homology CDS 211994 212221 . - 0 ID=cds-WP_001143120.1;Parent=gene-AD12_RS16630;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AD12_RS16630;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 212242 212838 . - . ID=gene-AD12_RS16625;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AD12_RS16625;old_locus_tag=AD12_1213 NZ_JJLK01000056.1 Protein Homology CDS 212242 212838 . - 0 ID=cds-WP_001151437.1;Parent=gene-AD12_RS16625;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AD12_RS16625;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 213211 213384 . + . ID=gene-AD12_RS0123545;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AD12_RS0123545 NZ_JJLK01000056.1 Protein Homology CDS 213211 213384 . + 0 ID=cds-WP_001273658.1;Parent=gene-AD12_RS0123545;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AD12_RS0123545;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 213467 214795 . - . ID=gene-AD12_RS16620;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AD12_RS16620;old_locus_tag=AD12_1214 NZ_JJLK01000056.1 Protein Homology CDS 213467 214795 . - 0 ID=cds-WP_001347171.1;Parent=gene-AD12_RS16620;Dbxref=GenBank:WP_001347171.1;Name=WP_001347171.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AD12_RS16620;product=pyrimidine utilization transport protein G;protein_id=WP_001347171.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 214816 215310 . - . ID=gene-AD12_RS16615;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AD12_RS16615;old_locus_tag=AD12_1215 NZ_JJLK01000056.1 Protein Homology CDS 214816 215310 . - 0 ID=cds-WP_001028095.1;Parent=gene-AD12_RS16615;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AD12_RS16615;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 215321 215911 . - . ID=gene-AD12_RS16610;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AD12_RS16610;old_locus_tag=AD12_1216 NZ_JJLK01000056.1 Protein Homology CDS 215321 215911 . - 0 ID=cds-WP_032286399.1;Parent=gene-AD12_RS16610;Dbxref=GenBank:WP_032286399.1;Name=WP_032286399.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706930.1;locus_tag=AD12_RS16610;product=malonic semialdehyde reductase;protein_id=WP_032286399.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 215921 216721 . - . ID=gene-AD12_RS16605;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AD12_RS16605;old_locus_tag=AD12_1217 NZ_JJLK01000056.1 Protein Homology CDS 215921 216721 . - 0 ID=cds-WP_001323674.1;Parent=gene-AD12_RS16605;Dbxref=GenBank:WP_001323674.1;Name=WP_001323674.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AD12_RS16605;product=pyrimidine utilization protein D;protein_id=WP_001323674.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 216729 217115 . - . ID=gene-AD12_RS16600;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AD12_RS16600;old_locus_tag=AD12_1218 NZ_JJLK01000056.1 Protein Homology CDS 216729 217115 . - 0 ID=cds-WP_001126780.1;Parent=gene-AD12_RS16600;Dbxref=GenBank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AD12_RS16600;product=3-aminoacrylate deaminase;protein_id=WP_001126780.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 217127 217819 . - . ID=gene-AD12_RS16595;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AD12_RS16595;old_locus_tag=AD12_1219 NZ_JJLK01000056.1 Protein Homology CDS 217127 217819 . - 0 ID=cds-WP_001345643.1;Parent=gene-AD12_RS16595;Dbxref=GenBank:WP_001345643.1;Name=WP_001345643.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AD12_RS16595;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001345643.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 217819 218910 . - . ID=gene-AD12_RS16590;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AD12_RS16590;old_locus_tag=AD12_1220 NZ_JJLK01000056.1 Protein Homology CDS 217819 218910 . - 0 ID=cds-WP_001345642.1;Parent=gene-AD12_RS16590;Dbxref=GenBank:WP_001345642.1;Name=WP_001345642.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AD12_RS16590;product=pyrimidine utilization protein A;protein_id=WP_001345642.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 219198 219836 . + . ID=gene-AD12_RS16585;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AD12_RS16585;old_locus_tag=AD12_1221 NZ_JJLK01000056.1 Protein Homology CDS 219198 219836 . + 0 ID=cds-WP_032286400.1;Parent=gene-AD12_RS16585;Dbxref=GenBank:WP_032286400.1;Name=WP_032286400.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AD12_RS16585;product=HTH-type transcriptional regulator RutR;protein_id=WP_032286400.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 219876 223838 . - . ID=gene-AD12_RS16580;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AD12_RS16580;old_locus_tag=AD12_1222 NZ_JJLK01000056.1 Protein Homology CDS 219876 223838 . - 0 ID=cds-WP_001299828.1;Parent=gene-AD12_RS16580;Dbxref=GenBank:WP_001299828.1;Name=WP_001299828.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=AD12_RS16580;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001299828.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 224260 225768 . + . ID=gene-AD12_RS16575;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AD12_RS16575;old_locus_tag=AD12_1224 NZ_JJLK01000056.1 Protein Homology CDS 224260 225768 . + 0 ID=cds-WP_001018486.1;Parent=gene-AD12_RS16575;Dbxref=GenBank:WP_001018486.1;Name=WP_001018486.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AD12_RS16575;product=sodium/proline symporter PutP;protein_id=WP_001018486.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 226311 227141 . + . ID=gene-AD12_RS16570;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AD12_RS16570;old_locus_tag=AD12_1225 NZ_JJLK01000056.1 Protein Homology CDS 226311 227141 . + 0 ID=cds-WP_000497942.1;Parent=gene-AD12_RS16570;Dbxref=GenBank:WP_000497942.1;Name=WP_000497942.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AD12_RS16570;product=iron uptake transporter permease EfeU;protein_id=WP_000497942.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 227199 228326 . + . ID=gene-AD12_RS16565;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AD12_RS16565;old_locus_tag=AD12_1226 NZ_JJLK01000056.1 Protein Homology CDS 227199 228326 . + 0 ID=cds-WP_000154414.1;Parent=gene-AD12_RS16565;Dbxref=GenBank:WP_000154414.1;Name=WP_000154414.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=AD12_RS16565;product=iron uptake system protein EfeO;protein_id=WP_000154414.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 228332 229603 . + . ID=gene-AD12_RS16560;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AD12_RS16560;old_locus_tag=AD12_1227 NZ_JJLK01000056.1 Protein Homology CDS 228332 229603 . + 0 ID=cds-WP_001199172.1;Parent=gene-AD12_RS16560;Dbxref=GenBank:WP_001199172.1;Name=WP_001199172.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309292.1;locus_tag=AD12_RS16560;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199172.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 230222 231010 . + . ID=gene-AD12_RS16550;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AD12_RS16550;old_locus_tag=AD12_1229 NZ_JJLK01000056.1 Protein Homology CDS 230222 231010 . + 0 ID=cds-WP_000533522.1;Parent=gene-AD12_RS16550;Dbxref=GenBank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AD12_RS16550;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 231060 231473 . - . ID=gene-AD12_RS0123560;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AD12_RS0123560;old_locus_tag=AD12_1230 NZ_JJLK01000056.1 Protein Homology CDS 231060 231473 . - 0 ID=cds-WP_001061095.1;Parent=gene-AD12_RS0123560;Dbxref=GenBank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AD12_RS0123560;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 231475 232800 . - . ID=gene-AD12_RS16545;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AD12_RS16545;old_locus_tag=AD12_1231 NZ_JJLK01000056.1 Protein Homology CDS 231475 232800 . - 0 ID=cds-WP_000610451.1;Parent=gene-AD12_RS16545;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AD12_RS16545;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 232793 234811 . - . ID=gene-AD12_RS16540;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AD12_RS16540;old_locus_tag=AD12_1232 NZ_JJLK01000056.1 Protein Homology CDS 232793 234811 . - 0 ID=cds-WP_000945561.1;Parent=gene-AD12_RS16540;Dbxref=GenBank:WP_000945561.1;Name=WP_000945561.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AD12_RS16540;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_000945561.1;transl_table=11 NZ_JJLK01000056.1 RefSeq pseudogene 234820 237243 . - . ID=gene-AD12_RS0123565;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=pseudogene;locus_tag=AD12_RS0123565;old_locus_tag=AD12_1234;pseudo=true NZ_JJLK01000056.1 Protein Homology CDS 234820 237243 . - 0 ID=cds-AD12_RS0123565;Parent=gene-AD12_RS0123565;Note=internal stop;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AD12_RS0123565;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;pseudo=true;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 237830 239188 . + . ID=gene-AD12_RS16535;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=AD12_RS16535;old_locus_tag=AD12_1235 NZ_JJLK01000056.1 Protein Homology CDS 237830 239188 . + 0 ID=cds-WP_032286401.1;Parent=gene-AD12_RS16535;Dbxref=GenBank:WP_032286401.1;Name=WP_032286401.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcT;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415544.1;locus_tag=AD12_RS16535;product=GGDEF domain-containing protein;protein_id=WP_032286401.1;transl_table=11 NZ_JJLK01000056.1 RefSeq gene 239229 239527 . - . ID=gene-AD12_RS26460;Name=AD12_RS26460;end_range=239527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26460;old_locus_tag=AD12_1236;partial=true NZ_JJLK01000056.1 Protein Homology CDS 239229 239527 . - 2 ID=cds-WP_001502260.1;Parent=gene-AD12_RS26460;Dbxref=GenBank:WP_001502260.1;Name=WP_001502260.1;Ontology_term=GO:0015074;end_range=239527,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD12_RS26460;partial=true;product=IS3 family transposase;protein_id=WP_001502260.1;transl_table=11 ##sequence-region NZ_JJLK01000057.1 1 176455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000057.1 RefSeq region 1 176455 . + . ID=NZ_JJLK01000057.1:1..176455;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000057.1 RefSeq pseudogene 1 863 . - . ID=gene-AD12_RS28620;Name=AD12_RS28620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28620;old_locus_tag=AD12_1237;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000057.1 Protein Homology CDS 1 863 . - 0 ID=cds-AD12_RS28620;Parent=gene-AD12_RS28620;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD12_RS28620;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 930 1457 . + . ID=gene-AD12_RS0123570;Name=AD12_RS0123570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123570;old_locus_tag=AD12_1239;partial=true;pseudo=true;start_range=.,930 NZ_JJLK01000057.1 Protein Homology CDS 930 1457 . + 0 ID=cds-AD12_RS0123570;Parent=gene-AD12_RS0123570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AD12_RS0123570;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,930;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 1454 2440 . + . ID=gene-AD12_RS16515;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AD12_RS16515;old_locus_tag=AD12_1240 NZ_JJLK01000057.1 Protein Homology CDS 1454 2440 . + 0 ID=cds-WP_000611856.1;Parent=gene-AD12_RS16515;Dbxref=GenBank:WP_000611856.1;Name=WP_000611856.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AD12_RS16515;product=protein YcdU;protein_id=WP_000611856.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 2633 2769 . - . ID=gene-AD12_RS25780;Name=AD12_RS25780;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25780 NZ_JJLK01000057.1 cmsearch ncRNA 2633 2769 . - . ID=rna-AD12_RS25780;Parent=gene-AD12_RS25780;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25780;product=RtT sRNA NZ_JJLK01000057.1 cmsearch exon 2633 2769 . - . ID=exon-AD12_RS25780-1;Parent=rna-AD12_RS25780;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25780;product=RtT sRNA NZ_JJLK01000057.1 RefSeq gene 2814 2950 . - . ID=gene-AD12_RS25785;Name=AD12_RS25785;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25785 NZ_JJLK01000057.1 cmsearch ncRNA 2814 2950 . - . ID=rna-AD12_RS25785;Parent=gene-AD12_RS25785;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25785;product=RtT sRNA NZ_JJLK01000057.1 cmsearch exon 2814 2950 . - . ID=exon-AD12_RS25785-1;Parent=rna-AD12_RS25785;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25785;product=RtT sRNA NZ_JJLK01000057.1 RefSeq gene 2995 3131 . - . ID=gene-AD12_RS25790;Name=AD12_RS25790;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25790 NZ_JJLK01000057.1 cmsearch ncRNA 2995 3131 . - . ID=rna-AD12_RS25790;Parent=gene-AD12_RS25790;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25790;product=RtT sRNA NZ_JJLK01000057.1 cmsearch exon 2995 3131 . - . ID=exon-AD12_RS25790-1;Parent=rna-AD12_RS25790;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25790;product=RtT sRNA NZ_JJLK01000057.1 RefSeq gene 3176 3263 . - . ID=gene-AD12_RS16510;Name=AD12_RS16510;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS16510;old_locus_tag=AD12_1241 NZ_JJLK01000057.1 tRNAscan-SE tRNA 3176 3263 . - . ID=rna-AD12_RS16510;Parent=gene-AD12_RS16510;anticodon=(pos:complement(3227..3229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS16510;product=tRNA-Ser NZ_JJLK01000057.1 tRNAscan-SE exon 3176 3263 . - . ID=exon-AD12_RS16510-1;Parent=rna-AD12_RS16510;anticodon=(pos:complement(3227..3229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS16510;product=tRNA-Ser NZ_JJLK01000057.1 RefSeq gene 3497 4435 . + . ID=gene-AD12_RS16505;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AD12_RS16505;old_locus_tag=AD12_1242 NZ_JJLK01000057.1 Protein Homology CDS 3497 4435 . + 0 ID=cds-WP_000351311.1;Parent=gene-AD12_RS16505;Dbxref=GenBank:WP_000351311.1;Name=WP_000351311.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AD12_RS16505;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351311.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 4490 5227 . + . ID=gene-AD12_RS16500;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AD12_RS16500;old_locus_tag=AD12_1243 NZ_JJLK01000057.1 Protein Homology CDS 4490 5227 . + 0 ID=cds-WP_000283664.1;Parent=gene-AD12_RS16500;Dbxref=GenBank:WP_000283664.1;Name=WP_000283664.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=AD12_RS16500;product=zinc-binding phosphatase;protein_id=WP_000283664.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 5251 5805 . + . ID=gene-AD12_RS16495;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AD12_RS16495;old_locus_tag=AD12_1244 NZ_JJLK01000057.1 Protein Homology CDS 5251 5805 . + 0 ID=cds-WP_001001902.1;Parent=gene-AD12_RS16495;Dbxref=GenBank:WP_001001902.1;Name=WP_001001902.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309439.1;locus_tag=AD12_RS16495;product=molecular chaperone YcdY;protein_id=WP_001001902.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 5907 6398 . + . ID=gene-AD12_RS16490;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AD12_RS16490;old_locus_tag=AD12_1245 NZ_JJLK01000057.1 Protein Homology CDS 5907 6398 . + 0 ID=cds-WP_001297187.1;Parent=gene-AD12_RS16490;Dbxref=GenBank:WP_001297187.1;Name=WP_001297187.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AD12_RS16490;product=DUF1097 domain-containing protein;protein_id=WP_001297187.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 6462 7295 . - . ID=gene-AD12_RS0123580;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AD12_RS0123580 NZ_JJLK01000057.1 Protein Homology CDS 6462 7295 . - 0 ID=cds-WP_001189321.1;Parent=gene-AD12_RS0123580;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AD12_RS0123580;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 7322 7738 . - . ID=gene-AD12_RS16485;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AD12_RS16485;old_locus_tag=AD12_1247 NZ_JJLK01000057.1 Protein Homology CDS 7322 7738 . - 0 ID=cds-WP_001264088.1;Parent=gene-AD12_RS16485;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AD12_RS16485;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 7763 8152 . - . ID=gene-AD12_RS16480;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AD12_RS16480;old_locus_tag=AD12_1248 NZ_JJLK01000057.1 Protein Homology CDS 7763 8152 . - 0 ID=cds-WP_000833288.1;Parent=gene-AD12_RS16480;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AD12_RS16480;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 8157 8807 . - . ID=gene-AD12_RS16475;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AD12_RS16475;old_locus_tag=AD12_1249 NZ_JJLK01000057.1 Protein Homology CDS 8157 8807 . - 0 ID=cds-WP_000481500.1;Parent=gene-AD12_RS16475;Dbxref=GenBank:WP_000481500.1;Name=WP_000481500.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=AD12_RS16475;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481500.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 9561 10016 . + . ID=gene-AD12_RS16465;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AD12_RS16465;old_locus_tag=AD12_1252 NZ_JJLK01000057.1 Protein Homology CDS 9561 10016 . + 0 ID=cds-WP_000791650.1;Parent=gene-AD12_RS16465;Dbxref=GenBank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AD12_RS16465;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 10057 10512 . + . ID=gene-AD12_RS16460;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AD12_RS16460;old_locus_tag=AD12_1253 NZ_JJLK01000057.1 Protein Homology CDS 10057 10512 . + 0 ID=cds-WP_000771437.1;Parent=gene-AD12_RS16460;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AD12_RS16460;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 10571 10903 . + . ID=gene-AD12_RS16455;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AD12_RS16455;old_locus_tag=AD12_1254 NZ_JJLK01000057.1 Protein Homology CDS 10571 10903 . + 0 ID=cds-WP_000992831.1;Parent=gene-AD12_RS16455;Dbxref=GenBank:WP_000992831.1;Name=WP_000992831.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309448.1;locus_tag=AD12_RS16455;product=curli assembly chaperone CsgC;protein_id=WP_000992831.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 11024 11335 . + . ID=gene-AD12_RS16450;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AD12_RS16450;old_locus_tag=AD12_1255 NZ_JJLK01000057.1 Protein Homology CDS 11024 11335 . + 0 ID=cds-WP_000489578.1;Parent=gene-AD12_RS16450;Dbxref=GenBank:WP_000489578.1;Name=WP_000489578.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309449.1;locus_tag=AD12_RS16450;product=protein YmdA;protein_id=WP_000489578.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 11430 11963 . + . ID=gene-AD12_RS16445;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AD12_RS16445;old_locus_tag=AD12_1256 NZ_JJLK01000057.1 Protein Homology CDS 11430 11963 . + 0 ID=cds-WP_000857399.1;Parent=gene-AD12_RS16445;Dbxref=GenBank:WP_000857399.1;Name=WP_000857399.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AD12_RS16445;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857399.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 11905 13386 . + . ID=gene-AD12_RS16440;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AD12_RS16440;old_locus_tag=AD12_1257 NZ_JJLK01000057.1 Protein Homology CDS 11905 13386 . + 0 ID=cds-WP_001307714.1;Parent=gene-AD12_RS16440;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AD12_RS16440;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 13394 14551 . - . ID=gene-AD12_RS16435;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AD12_RS16435;old_locus_tag=AD12_1258 NZ_JJLK01000057.1 Protein Homology CDS 13394 14551 . - 0 ID=cds-WP_001070350.1;Parent=gene-AD12_RS16435;Dbxref=GenBank:WP_001070350.1;Name=WP_001070350.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706958.2;locus_tag=AD12_RS16435;product=glucans biosynthesis protein MdoC;protein_id=WP_001070350.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 14945 16480 . + . ID=gene-AD12_RS16420;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AD12_RS16420;old_locus_tag=AD12_1261 NZ_JJLK01000057.1 Protein Homology CDS 14945 16480 . + 0 ID=cds-WP_077745027.1;Parent=gene-AD12_RS16420;Dbxref=GenBank:WP_077745027.1;Name=WP_077745027.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AD12_RS16420;product=glucans biosynthesis protein MdoG;protein_id=WP_077745027.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 16473 19016 . + . ID=gene-AD12_RS16415;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AD12_RS16415;old_locus_tag=AD12_1262 NZ_JJLK01000057.1 Protein Homology CDS 16473 19016 . + 0 ID=cds-WP_001295445.1;Parent=gene-AD12_RS16415;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AD12_RS16415;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 19189 19416 . + . ID=gene-AD12_RS16410;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AD12_RS16410;old_locus_tag=AD12_1263 NZ_JJLK01000057.1 Protein Homology CDS 19189 19416 . + 0 ID=cds-WP_001237205.1;Parent=gene-AD12_RS16410;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AD12_RS16410;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 19417 19791 . - . ID=gene-AD12_RS16405;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AD12_RS16405;old_locus_tag=AD12_1264 NZ_JJLK01000057.1 Protein Homology CDS 19417 19791 . - 0 ID=cds-WP_000180056.1;Parent=gene-AD12_RS16405;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AD12_RS16405;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 19874 21100 . - . ID=gene-AD12_RS16400;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AD12_RS16400;old_locus_tag=AD12_1265 NZ_JJLK01000057.1 Protein Homology CDS 19874 21100 . - 0 ID=cds-WP_000074172.1;Parent=gene-AD12_RS16400;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AD12_RS16400;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 21272 22192 . - . ID=gene-AD12_RS16395;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AD12_RS16395;old_locus_tag=AD12_1266 NZ_JJLK01000057.1 Protein Homology CDS 21272 22192 . - 0 ID=cds-WP_000183364.1;Parent=gene-AD12_RS16395;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AD12_RS16395;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 22417 23469 . + . ID=gene-AD12_RS16390;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AD12_RS16390;old_locus_tag=AD12_1267 NZ_JJLK01000057.1 Protein Homology CDS 22417 23469 . + 0 ID=cds-WP_001144616.1;Parent=gene-AD12_RS16390;Dbxref=GenBank:WP_001144616.1;Name=WP_001144616.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706977.2;locus_tag=AD12_RS16390;product=rhodanese-related sulfurtransferase;protein_id=WP_001144616.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 23511 24086 . - . ID=gene-AD12_RS16385;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AD12_RS16385;old_locus_tag=AD12_1268 NZ_JJLK01000057.1 Protein Homology CDS 23511 24086 . - 0 ID=cds-WP_000749261.1;Parent=gene-AD12_RS16385;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AD12_RS16385;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 24090 24656 . - . ID=gene-AD12_RS16380;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=AD12_RS16380;old_locus_tag=AD12_1269 NZ_JJLK01000057.1 Protein Homology CDS 24090 24656 . - 0 ID=cds-WP_000011108.1;Parent=gene-AD12_RS16380;Dbxref=GenBank:WP_000011108.1;Name=WP_000011108.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=AD12_RS16380;product=cytochrome b;protein_id=WP_000011108.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 24917 25030 . - . ID=gene-AD12_RS16375;Name=AD12_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS16375;old_locus_tag=AD12_1271 NZ_JJLK01000057.1 Protein Homology CDS 24917 25030 . - 0 ID=cds-WP_001253418.1;Parent=gene-AD12_RS16375;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AD12_RS16375;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 25078 26196 . - . ID=gene-AD12_RS16370;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AD12_RS16370;old_locus_tag=AD12_1272 NZ_JJLK01000057.1 Protein Homology CDS 25078 26196 . - 0 ID=cds-WP_000872805.1;Parent=gene-AD12_RS16370;Dbxref=GenBank:WP_000872805.1;Name=WP_000872805.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706981.1;locus_tag=AD12_RS16370;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872805.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 26311 26565 . - . ID=gene-AD12_RS16365;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AD12_RS16365;old_locus_tag=AD12_1273 NZ_JJLK01000057.1 Protein Homology CDS 26311 26565 . - 0 ID=cds-WP_000414437.1;Parent=gene-AD12_RS16365;Dbxref=GenBank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=AD12_RS16365;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 26855 27100 . - . ID=gene-AD12_RS16360;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AD12_RS16360;old_locus_tag=AD12_1274 NZ_JJLK01000057.1 Protein Homology CDS 26855 27100 . - 0 ID=cds-WP_001217754.1;Parent=gene-AD12_RS16360;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AD12_RS16360;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 27174 28220 . - . ID=gene-AD12_RS16355;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AD12_RS16355;old_locus_tag=AD12_1275 NZ_JJLK01000057.1 Protein Homology CDS 27174 28220 . - 0 ID=cds-WP_000126556.1;Parent=gene-AD12_RS16355;Dbxref=GenBank:WP_000126556.1;Name=WP_000126556.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AD12_RS16355;product=dihydroorotase;protein_id=WP_000126556.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 28326 28886 . - . ID=gene-AD12_RS16350;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AD12_RS16350;old_locus_tag=AD12_1276 NZ_JJLK01000057.1 Protein Homology CDS 28326 28886 . - 0 ID=cds-WP_001295443.1;Parent=gene-AD12_RS16350;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AD12_RS16350;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 29020 29667 . - . ID=gene-AD12_RS16345;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AD12_RS16345;old_locus_tag=AD12_1277 NZ_JJLK01000057.1 Protein Homology CDS 29020 29667 . - 0 ID=cds-WP_000780912.1;Parent=gene-AD12_RS16345;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AD12_RS16345;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 29731 30939 . - . ID=gene-AD12_RS16340;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AD12_RS16340;old_locus_tag=AD12_1278 NZ_JJLK01000057.1 Protein Homology CDS 29731 30939 . - 0 ID=cds-WP_000092206.1;Parent=gene-AD12_RS16340;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AD12_RS16340;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 31175 31759 . + . ID=gene-AD12_RS16335;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AD12_RS16335;old_locus_tag=AD12_1279 NZ_JJLK01000057.1 Protein Homology CDS 31175 31759 . + 0 ID=cds-WP_000468186.1;Parent=gene-AD12_RS16335;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AD12_RS16335;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 31770 32417 . + . ID=gene-AD12_RS16330;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AD12_RS16330;old_locus_tag=AD12_1280 NZ_JJLK01000057.1 Protein Homology CDS 31770 32417 . + 0 ID=cds-WP_000877120.1;Parent=gene-AD12_RS16330;Dbxref=GenBank:WP_000877120.1;Name=WP_000877120.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=AD12_RS16330;product=YceH family protein;protein_id=WP_000877120.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 32419 33342 . + . ID=gene-AD12_RS16325;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AD12_RS16325;old_locus_tag=AD12_1281 NZ_JJLK01000057.1 Protein Homology CDS 32419 33342 . + 0 ID=cds-WP_032286408.1;Parent=gene-AD12_RS16325;Dbxref=GenBank:WP_032286408.1;Name=WP_032286408.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AD12_RS16325;product=Gfo/Idh/MocA family protein;protein_id=WP_032286408.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 33452 34987 . + . ID=gene-AD12_RS16320;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AD12_RS16320;old_locus_tag=AD12_1282 NZ_JJLK01000057.1 Protein Homology CDS 33452 34987 . + 0 ID=cds-WP_001050683.1;Parent=gene-AD12_RS16320;Dbxref=GenBank:WP_001050683.1;Name=WP_001050683.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AD12_RS16320;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 35027 35443 . - . ID=gene-AD12_RS16315;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AD12_RS16315;old_locus_tag=AD12_1283 NZ_JJLK01000057.1 Protein Homology CDS 35027 35443 . - 0 ID=cds-WP_000197355.1;Parent=gene-AD12_RS16315;Dbxref=GenBank:WP_000197355.1;Name=WP_000197355.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309475.1;locus_tag=AD12_RS16315;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197355.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 35448 35741 . - . ID=gene-AD12_RS16310;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD12_RS16310;old_locus_tag=AD12_1284 NZ_JJLK01000057.1 Protein Homology CDS 35448 35741 . - 0 ID=cds-WP_000020880.1;Parent=gene-AD12_RS16310;Dbxref=GenBank:WP_000020880.1;Name=WP_000020880.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AD12_RS16310;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 35817 36476 . - . ID=gene-AD12_RS16305;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD12_RS16305;old_locus_tag=AD12_1285 NZ_JJLK01000057.1 Protein Homology CDS 35817 36476 . - 0 ID=cds-WP_000879698.1;Parent=gene-AD12_RS16305;Dbxref=GenBank:WP_000879698.1;Name=WP_000879698.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309477.1;locus_tag=AD12_RS16305;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000879698.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 36631 37047 . + . ID=gene-AD12_RS16300;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AD12_RS16300;old_locus_tag=AD12_1287 NZ_JJLK01000057.1 Protein Homology CDS 36631 37047 . + 0 ID=cds-WP_000884702.1;Parent=gene-AD12_RS16300;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AD12_RS16300;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 37051 37455 . + . ID=gene-AD12_RS16295;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD12_RS16295;old_locus_tag=AD12_1288 NZ_JJLK01000057.1 Protein Homology CDS 37051 37455 . + 0 ID=cds-WP_001196460.1;Parent=gene-AD12_RS16295;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AD12_RS16295;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 37467 38162 . + . ID=gene-AD12_RS16290;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AD12_RS16290;old_locus_tag=AD12_1289 NZ_JJLK01000057.1 Protein Homology CDS 37467 38162 . + 0 ID=cds-WP_000020484.1;Parent=gene-AD12_RS16290;Dbxref=GenBank:WP_000020484.1;Name=WP_000020484.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=AD12_RS16290;product=flagellar hook assembly protein FlgD;protein_id=WP_000020484.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 38187 39392 . + . ID=gene-AD12_RS16285;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AD12_RS16285;old_locus_tag=AD12_1290 NZ_JJLK01000057.1 Protein Homology CDS 38187 39392 . + 0 ID=cds-WP_000885878.1;Parent=gene-AD12_RS16285;Dbxref=GenBank:WP_000885878.1;Name=WP_000885878.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309481.1;locus_tag=AD12_RS16285;product=flagellar hook protein FlgE;protein_id=WP_000885878.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 39412 40167 . + . ID=gene-AD12_RS16280;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AD12_RS16280;old_locus_tag=AD12_1291 NZ_JJLK01000057.1 Protein Homology CDS 39412 40167 . + 0 ID=cds-WP_000349316.1;Parent=gene-AD12_RS16280;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AD12_RS16280;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 40339 41121 . + . ID=gene-AD12_RS16275;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD12_RS16275;old_locus_tag=AD12_1292 NZ_JJLK01000057.1 Protein Homology CDS 40339 41121 . + 0 ID=cds-WP_000625837.1;Parent=gene-AD12_RS16275;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AD12_RS16275;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 41174 41872 . + . ID=gene-AD12_RS16270;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD12_RS16270;old_locus_tag=AD12_1293 NZ_JJLK01000057.1 Protein Homology CDS 41174 41872 . + 0 ID=cds-WP_001295442.1;Parent=gene-AD12_RS16270;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AD12_RS16270;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 41884 42981 . + . ID=gene-AD12_RS16265;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AD12_RS16265;old_locus_tag=AD12_1294 NZ_JJLK01000057.1 Protein Homology CDS 41884 42981 . + 0 ID=cds-WP_000589326.1;Parent=gene-AD12_RS16265;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AD12_RS16265;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 42981 43922 . + . ID=gene-AD12_RS16260;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AD12_RS16260;old_locus_tag=AD12_1295 NZ_JJLK01000057.1 Protein Homology CDS 42981 43922 . + 0 ID=cds-WP_001323587.1;Parent=gene-AD12_RS16260;Dbxref=GenBank:WP_001323587.1;Name=WP_001323587.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AD12_RS16260;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001323587.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 43988 45631 . + . ID=gene-AD12_RS16255;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD12_RS16255;old_locus_tag=AD12_1296 NZ_JJLK01000057.1 Protein Homology CDS 43988 45631 . + 0 ID=cds-WP_000096466.1;Parent=gene-AD12_RS16255;Dbxref=GenBank:WP_000096466.1;Name=WP_000096466.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AD12_RS16255;product=flagellar hook-associated protein FlgK;protein_id=WP_000096466.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 45643 46596 . + . ID=gene-AD12_RS16250;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD12_RS16250;old_locus_tag=AD12_1297 NZ_JJLK01000057.1 Protein Homology CDS 45643 46596 . + 0 ID=cds-WP_001212754.1;Parent=gene-AD12_RS16250;Dbxref=GenBank:WP_001212754.1;Name=WP_001212754.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309488.1;locus_tag=AD12_RS16250;product=flagellar hook-associated protein FlgL;protein_id=WP_001212754.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 46793 49978 . - . ID=gene-AD12_RS16245;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AD12_RS16245;old_locus_tag=AD12_1298 NZ_JJLK01000057.1 Protein Homology CDS 46793 49978 . - 0 ID=cds-WP_000827383.1;Parent=gene-AD12_RS16245;Dbxref=GenBank:WP_000827383.1;Name=WP_000827383.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309489.1;locus_tag=AD12_RS16245;product=ribonuclease E;protein_id=WP_000827383.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 50551 51510 . + . ID=gene-AD12_RS16240;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AD12_RS16240;old_locus_tag=AD12_1299 NZ_JJLK01000057.1 Protein Homology CDS 50551 51510 . + 0 ID=cds-WP_000846343.1;Parent=gene-AD12_RS16240;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AD12_RS16240;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 51622 52206 . - . ID=gene-AD12_RS16235;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AD12_RS16235;old_locus_tag=AD12_1301 NZ_JJLK01000057.1 Protein Homology CDS 51622 52206 . - 0 ID=cds-WP_001361901.1;Parent=gene-AD12_RS16235;Dbxref=GenBank:WP_001361901.1;Name=WP_001361901.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AD12_RS16235;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001361901.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 52405 52926 . + . ID=gene-AD12_RS16230;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AD12_RS16230;old_locus_tag=AD12_1302 NZ_JJLK01000057.1 Protein Homology CDS 52405 52926 . + 0 ID=cds-WP_001174481.1;Parent=gene-AD12_RS16230;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AD12_RS16230;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 52978 53151 . + . ID=gene-AD12_RS16225;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AD12_RS16225;old_locus_tag=AD12_1303 NZ_JJLK01000057.1 Protein Homology CDS 52978 53151 . + 0 ID=cds-WP_000290727.1;Parent=gene-AD12_RS16225;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AD12_RS16225;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 53232 54302 . + . ID=gene-AD12_RS16220;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AD12_RS16220;old_locus_tag=AD12_1304 NZ_JJLK01000057.1 Protein Homology CDS 53232 54302 . + 0 ID=cds-WP_071999183.1;Parent=gene-AD12_RS16220;Dbxref=GenBank:WP_071999183.1;Name=WP_071999183.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AD12_RS16220;product=phosphate acyltransferase PlsX;protein_id=WP_071999183.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 54370 55323 . + . ID=gene-AD12_RS16215;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AD12_RS16215;old_locus_tag=AD12_1305 NZ_JJLK01000057.1 Protein Homology CDS 54370 55323 . + 0 ID=cds-WP_032286411.1;Parent=gene-AD12_RS16215;Dbxref=GenBank:WP_032286411.1;Name=WP_032286411.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AD12_RS16215;product=beta-ketoacyl-ACP synthase III;protein_id=WP_032286411.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 55339 56268 . + . ID=gene-AD12_RS16210;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AD12_RS16210;old_locus_tag=AD12_1306 NZ_JJLK01000057.1 Protein Homology CDS 55339 56268 . + 0 ID=cds-WP_000191372.1;Parent=gene-AD12_RS16210;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AD12_RS16210;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 56281 57015 . + . ID=gene-AD12_RS16205;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AD12_RS16205;old_locus_tag=AD12_1307 NZ_JJLK01000057.1 Protein Homology CDS 56281 57015 . + 0 ID=cds-WP_001008535.1;Parent=gene-AD12_RS16205;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AD12_RS16205;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 57226 57462 . + . ID=gene-AD12_RS16200;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AD12_RS16200;old_locus_tag=AD12_1308 NZ_JJLK01000057.1 Protein Homology CDS 57226 57462 . + 0 ID=cds-WP_000103754.1;Parent=gene-AD12_RS16200;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AD12_RS16200;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 57550 58791 . + . ID=gene-AD12_RS16195;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AD12_RS16195;old_locus_tag=AD12_1309 NZ_JJLK01000057.1 Protein Homology CDS 57550 58791 . + 0 ID=cds-WP_000044679.1;Parent=gene-AD12_RS16195;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AD12_RS16195;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 58911 59720 . + . ID=gene-AD12_RS16190;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AD12_RS16190;old_locus_tag=AD12_1310 NZ_JJLK01000057.1 Protein Homology CDS 58911 59720 . + 0 ID=cds-WP_032286413.1;Parent=gene-AD12_RS16190;Dbxref=GenBank:WP_032286413.1;Name=WP_032286413.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707012.1;locus_tag=AD12_RS16190;product=aminodeoxychorismate lyase;protein_id=WP_032286413.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 59723 60745 . + . ID=gene-AD12_RS16185;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AD12_RS16185;old_locus_tag=AD12_1311 NZ_JJLK01000057.1 Protein Homology CDS 59723 60745 . + 0 ID=cds-WP_000756838.1;Parent=gene-AD12_RS16185;Dbxref=GenBank:WP_000756838.1;Name=WP_000756838.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AD12_RS16185;product=cell division protein YceG;protein_id=WP_000756838.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 60735 61376 . + . ID=gene-AD12_RS16180;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AD12_RS16180;old_locus_tag=AD12_1312 NZ_JJLK01000057.1 Protein Homology CDS 60735 61376 . + 0 ID=cds-WP_001257000.1;Parent=gene-AD12_RS16180;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AD12_RS16180;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 61373 62377 . + . ID=gene-AD12_RS16175;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AD12_RS16175;old_locus_tag=AD12_1313 NZ_JJLK01000057.1 Protein Homology CDS 61373 62377 . + 0 ID=cds-WP_001267931.1;Parent=gene-AD12_RS16175;Dbxref=GenBank:WP_001267931.1;Name=WP_001267931.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309504.1;locus_tag=AD12_RS16175;product=DNA polymerase III subunit delta';protein_id=WP_001267931.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 62388 63185 . + . ID=gene-AD12_RS16170;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AD12_RS16170;old_locus_tag=AD12_1314 NZ_JJLK01000057.1 Protein Homology CDS 62388 63185 . + 0 ID=cds-WP_000480245.1;Parent=gene-AD12_RS16170;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AD12_RS16170;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 63480 64913 . + . ID=gene-AD12_RS16165;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AD12_RS16165;old_locus_tag=AD12_1315 NZ_JJLK01000057.1 Protein Homology CDS 63480 64913 . + 0 ID=cds-WP_000475719.1;Parent=gene-AD12_RS16165;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AD12_RS16165;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 64973 67162 . - . ID=gene-AD12_RS16160;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AD12_RS16160;old_locus_tag=AD12_1316 NZ_JJLK01000057.1 Protein Homology CDS 64973 67162 . - 0 ID=cds-WP_000953451.1;Parent=gene-AD12_RS16160;Dbxref=GenBank:WP_000953451.1;Name=WP_000953451.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309507.1;locus_tag=AD12_RS16160;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000953451.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 67496 67855 . + . ID=gene-AD12_RS16155;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AD12_RS16155;old_locus_tag=AD12_1318 NZ_JJLK01000057.1 Protein Homology CDS 67496 67855 . + 0 ID=cds-WP_000807125.1;Parent=gene-AD12_RS16155;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AD12_RS16155;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 67858 68235 . + . ID=gene-AD12_RS16150;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AD12_RS16150;old_locus_tag=AD12_1319 NZ_JJLK01000057.1 Protein Homology CDS 67858 68235 . + 0 ID=cds-WP_001225276.1;Parent=gene-AD12_RS16150;Dbxref=GenBank:WP_001225276.1;Name=WP_001225276.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309509.1;locus_tag=AD12_RS16150;product=YcfL family protein;protein_id=WP_001225276.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 68249 68890 . + . ID=gene-AD12_RS16145;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AD12_RS16145;old_locus_tag=AD12_1320 NZ_JJLK01000057.1 Protein Homology CDS 68249 68890 . + 0 ID=cds-WP_000164439.1;Parent=gene-AD12_RS16145;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AD12_RS16145;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 68871 69695 . + . ID=gene-AD12_RS16140;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AD12_RS16140;old_locus_tag=AD12_1321 NZ_JJLK01000057.1 Protein Homology CDS 68871 69695 . + 0 ID=cds-WP_001116566.1;Parent=gene-AD12_RS16140;Dbxref=GenBank:WP_001116566.1;Name=WP_001116566.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309511.1;locus_tag=AD12_RS16140;product=thiamine kinase;protein_id=WP_001116566.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 69706 70731 . + . ID=gene-AD12_RS16135;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AD12_RS16135;old_locus_tag=AD12_1322 NZ_JJLK01000057.1 Protein Homology CDS 69706 70731 . + 0 ID=cds-WP_032286414.1;Parent=gene-AD12_RS16135;Dbxref=GenBank:WP_032286414.1;Name=WP_032286414.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AD12_RS16135;product=beta-N-acetylhexosaminidase;protein_id=WP_032286414.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 70754 71296 . + . ID=gene-AD12_RS16130;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AD12_RS16130;old_locus_tag=AD12_1323 NZ_JJLK01000057.1 Protein Homology CDS 70754 71296 . + 0 ID=cds-WP_000587933.1;Parent=gene-AD12_RS16130;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AD12_RS16130;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 71704 73008 . + . ID=gene-AD12_RS16125;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AD12_RS16125;old_locus_tag=AD12_1324 NZ_JJLK01000057.1 Protein Homology CDS 71704 73008 . + 0 ID=cds-WP_000211045.1;Parent=gene-AD12_RS16125;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AD12_RS16125;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 73235 73774 . + . ID=gene-AD12_RS16120;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AD12_RS16120;old_locus_tag=AD12_1325 NZ_JJLK01000057.1 Protein Homology CDS 73235 73774 . + 0 ID=cds-WP_001043459.1;Parent=gene-AD12_RS16120;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AD12_RS16120;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 73836 74468 . - . ID=gene-AD12_RS16115;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AD12_RS16115;old_locus_tag=AD12_1326 NZ_JJLK01000057.1 Protein Homology CDS 73836 74468 . - 0 ID=cds-WP_000179805.1;Parent=gene-AD12_RS16115;Dbxref=GenBank:WP_000179805.1;Name=WP_000179805.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AD12_RS16115;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000179805.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 74709 74966 . + . ID=gene-AD12_RS16110;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AD12_RS16110;old_locus_tag=AD12_1327 NZ_JJLK01000057.1 Protein Homology CDS 74709 74966 . + 0 ID=cds-WP_000800153.1;Parent=gene-AD12_RS16110;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AD12_RS16110;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 75049 76011 . - . ID=gene-AD12_RS16105;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AD12_RS16105;old_locus_tag=AD12_1328 NZ_JJLK01000057.1 Protein Homology CDS 75049 76011 . - 0 ID=cds-WP_001300895.1;Parent=gene-AD12_RS16105;Dbxref=GenBank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AD12_RS16105;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 76155 79601 . - . ID=gene-AD12_RS16100;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AD12_RS16100;old_locus_tag=AD12_1329 NZ_JJLK01000057.1 Protein Homology CDS 76155 79601 . - 0 ID=cds-WP_001299842.1;Parent=gene-AD12_RS16100;Dbxref=GenBank:WP_001299842.1;Name=WP_001299842.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AD12_RS16100;product=transcription-repair coupling factor;protein_id=WP_001299842.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 79729 80802 . - . ID=gene-AD12_RS16095;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AD12_RS16095;old_locus_tag=AD12_1330 NZ_JJLK01000057.1 Protein Homology CDS 79729 80802 . - 0 ID=cds-WP_000810250.1;Parent=gene-AD12_RS16095;Dbxref=GenBank:WP_000810250.1;Name=WP_000810250.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AD12_RS16095;product=acyltransferase family protein;protein_id=WP_000810250.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 81064 82263 . + . ID=gene-AD12_RS16090;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AD12_RS16090;old_locus_tag=AD12_1331 NZ_JJLK01000057.1 Protein Homology CDS 81064 82263 . + 0 ID=cds-WP_000284714.1;Parent=gene-AD12_RS16090;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AD12_RS16090;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 82256 82957 . + . ID=gene-AD12_RS16085;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AD12_RS16085;old_locus_tag=AD12_1332 NZ_JJLK01000057.1 Protein Homology CDS 82256 82957 . + 0 ID=cds-WP_001033695.1;Parent=gene-AD12_RS16085;Dbxref=GenBank:WP_001033695.1;Name=WP_001033695.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309522.2;locus_tag=AD12_RS16085;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033695.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 82957 84201 . + . ID=gene-AD12_RS16080;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AD12_RS16080;old_locus_tag=AD12_1333 NZ_JJLK01000057.1 Protein Homology CDS 82957 84201 . + 0 ID=cds-WP_032286415.1;Parent=gene-AD12_RS16080;Dbxref=GenBank:WP_032286415.1;Name=WP_032286415.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707033.1;locus_tag=AD12_RS16080;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_032286415.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 84230 85141 . + . ID=gene-AD12_RS16075;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AD12_RS16075;old_locus_tag=AD12_1334 NZ_JJLK01000057.1 Protein Homology CDS 84230 85141 . + 0 ID=cds-WP_000291270.1;Parent=gene-AD12_RS16075;Dbxref=GenBank:WP_000291270.1;Name=WP_000291270.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AD12_RS16075;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 85157 85978 . + . ID=gene-AD12_RS16070;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AD12_RS16070;old_locus_tag=AD12_1335 NZ_JJLK01000057.1 Protein Homology CDS 85157 85978 . + 0 ID=cds-WP_000952736.1;Parent=gene-AD12_RS16070;Dbxref=GenBank:WP_000952736.1;Name=WP_000952736.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309525.1;locus_tag=AD12_RS16070;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952736.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 86117 86905 . - . ID=gene-AD12_RS16065;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AD12_RS16065;old_locus_tag=AD12_1336 NZ_JJLK01000057.1 Protein Homology CDS 86117 86905 . - 0 ID=cds-WP_000713472.1;Parent=gene-AD12_RS16065;Dbxref=GenBank:WP_000713472.1;Name=WP_000713472.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AD12_RS16065;product=TPM domain-containing protein;protein_id=WP_000713472.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 86902 87363 . - . ID=gene-AD12_RS16060;Name=AD12_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS16060;old_locus_tag=AD12_1337 NZ_JJLK01000057.1 Protein Homology CDS 86902 87363 . - 0 ID=cds-WP_000076381.1;Parent=gene-AD12_RS16060;Dbxref=GenBank:WP_000076381.1;Name=WP_000076381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001460774.1;locus_tag=AD12_RS16060;product=DUF3592 domain-containing protein;protein_id=WP_000076381.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 87421 88467 . - . ID=gene-AD12_RS16055;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AD12_RS16055;old_locus_tag=AD12_1338 NZ_JJLK01000057.1 Protein Homology CDS 87421 88467 . - 0 ID=cds-WP_000759317.1;Parent=gene-AD12_RS16055;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AD12_RS16055;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 88464 89258 . - . ID=gene-AD12_RS16050;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AD12_RS16050;old_locus_tag=AD12_1339 NZ_JJLK01000057.1 Protein Homology CDS 88464 89258 . - 0 ID=cds-WP_000580316.1;Parent=gene-AD12_RS16050;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AD12_RS16050;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 89255 90112 . - . ID=gene-AD12_RS16045;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AD12_RS16045;old_locus_tag=AD12_1340 NZ_JJLK01000057.1 Protein Homology CDS 89255 90112 . - 0 ID=cds-WP_000799401.1;Parent=gene-AD12_RS16045;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AD12_RS16045;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 90096 91232 . - . ID=gene-AD12_RS16040;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AD12_RS16040;old_locus_tag=AD12_1341 NZ_JJLK01000057.1 Protein Homology CDS 90096 91232 . - 0 ID=cds-WP_000531601.1;Parent=gene-AD12_RS16040;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AD12_RS16040;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 91482 92708 . + . ID=gene-AD12_RS16035;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AD12_RS16035;old_locus_tag=AD12_1342 NZ_JJLK01000057.1 Protein Homology CDS 91482 92708 . + 0 ID=cds-WP_000359457.1;Parent=gene-AD12_RS16035;Dbxref=GenBank:WP_000359457.1;Name=WP_000359457.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309599.1;locus_tag=AD12_RS16035;product=peptidase T;protein_id=WP_000359457.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 92757 93878 . - . ID=gene-AD12_RS16030;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AD12_RS16030;old_locus_tag=AD12_1343 NZ_JJLK01000057.1 Protein Homology CDS 92757 93878 . - 0 ID=cds-WP_001295435.1;Parent=gene-AD12_RS16030;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AD12_RS16030;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 93954 95414 . - . ID=gene-AD12_RS16025;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AD12_RS16025;old_locus_tag=AD12_1344 NZ_JJLK01000057.1 Protein Homology CDS 93954 95414 . - 0 ID=cds-WP_000735412.1;Parent=gene-AD12_RS16025;Dbxref=GenBank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AD12_RS16025;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 95414 96085 . - . ID=gene-AD12_RS16020;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AD12_RS16020;old_locus_tag=AD12_1345 NZ_JJLK01000057.1 Protein Homology CDS 95414 96085 . - 0 ID=cds-WP_001265471.1;Parent=gene-AD12_RS16020;Dbxref=GenBank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AD12_RS16020;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 96254 97624 . - . ID=gene-AD12_RS16015;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AD12_RS16015;old_locus_tag=AD12_1346 NZ_JJLK01000057.1 Protein Homology CDS 96254 97624 . - 0 ID=cds-WP_000423742.1;Parent=gene-AD12_RS16015;Dbxref=GenBank:WP_000423742.1;Name=WP_000423742.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AD12_RS16015;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 97628 98269 . - . ID=gene-AD12_RS16010;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AD12_RS16010;old_locus_tag=AD12_1347 NZ_JJLK01000057.1 Protein Homology CDS 97628 98269 . - 0 ID=cds-WP_032286423.1;Parent=gene-AD12_RS16010;Dbxref=GenBank:WP_032286423.1;Name=WP_032286423.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AD12_RS16010;product=high frequency lysogenization protein HflD;protein_id=WP_032286423.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 98305 99411 . - . ID=gene-AD12_RS16005;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AD12_RS16005;old_locus_tag=AD12_1348 NZ_JJLK01000057.1 Protein Homology CDS 98305 99411 . - 0 ID=cds-WP_032286416.1;Parent=gene-AD12_RS16005;Dbxref=GenBank:WP_032286416.1;Name=WP_032286416.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AD12_RS16005;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_032286416.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 99465 99926 . - . ID=gene-AD12_RS16000;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AD12_RS16000;old_locus_tag=AD12_1349 NZ_JJLK01000057.1 Protein Homology CDS 99465 99926 . - 0 ID=cds-WP_000476093.1;Parent=gene-AD12_RS16000;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AD12_RS16000;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 99936 100589 . - . ID=gene-AD12_RS15995;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AD12_RS15995;old_locus_tag=AD12_1350 NZ_JJLK01000057.1 Protein Homology CDS 99936 100589 . - 0 ID=cds-WP_001248691.1;Parent=gene-AD12_RS15995;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AD12_RS15995;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 100761 102011 . + . ID=gene-AD12_RS15990;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AD12_RS15990;old_locus_tag=AD12_1351 NZ_JJLK01000057.1 Protein Homology CDS 100761 102011 . + 0 ID=cds-WP_000444487.1;Parent=gene-AD12_RS15990;Dbxref=GenBank:WP_000444487.1;Name=WP_000444487.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AD12_RS15990;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444487.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 102114 102437 . - . ID=gene-AD12_RS0123600;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AD12_RS0123600 NZ_JJLK01000057.1 Protein Homology CDS 102114 102437 . - 0 ID=cds-WP_001307134.1;Parent=gene-AD12_RS0123600;Dbxref=GenBank:WP_001307134.1;Name=WP_001307134.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AD12_RS0123600;product=anti-adapter protein IraM;protein_id=WP_001307134.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 102690 102734 . - . ID=gene-AD12_RS29025;Name=AD12_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29025 NZ_JJLK01000057.1 Protein Homology CDS 102690 102734 . - 0 ID=cds-WP_120795380.1;Parent=gene-AD12_RS29025;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AD12_RS29025;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 102970 103080 . - . ID=gene-AD12_RS28625;Name=AD12_RS28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28625 NZ_JJLK01000057.1 Protein Homology CDS 102970 103080 . - 0 ID=cds-WP_032286417.1;Parent=gene-AD12_RS28625;Dbxref=GenBank:WP_032286417.1;Name=WP_032286417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AD12_RS28625;product=protein YmgL;protein_id=WP_032286417.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 103133 103537 . - . ID=gene-AD12_RS15985;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AD12_RS15985;old_locus_tag=AD12_1352 NZ_JJLK01000057.1 Protein Homology CDS 103133 103537 . - 0 ID=cds-WP_000373101.1;Parent=gene-AD12_RS15985;Dbxref=GenBank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AD12_RS15985;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 103758 104489 . - . ID=gene-AD12_RS15980;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AD12_RS15980;old_locus_tag=AD12_1353 NZ_JJLK01000057.1 Protein Homology CDS 103758 104489 . - 0 ID=cds-WP_000332303.1;Parent=gene-AD12_RS15980;Dbxref=GenBank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AD12_RS15980;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 104694 105905 . - . ID=gene-AD12_RS15975;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=pseudogene;locus_tag=AD12_RS15975;old_locus_tag=AD12_1354;pseudo=true NZ_JJLK01000057.1 Protein Homology CDS 104694 105905 . - 0 ID=cds-AD12_RS15975;Parent=gene-AD12_RS15975;Note=internal stop;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AD12_RS15975;product=blue light-responsive regulator BluF;pseudo=true;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 106219 106455 . + . ID=gene-AD12_RS0123610;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AD12_RS0123610 NZ_JJLK01000057.1 Protein Homology CDS 106219 106455 . + 0 ID=cds-WP_000554153.1;Parent=gene-AD12_RS0123610;Dbxref=GenBank:WP_000554153.1;Name=WP_000554153.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AD12_RS0123610;product=regulatory protein YcgZ;protein_id=WP_000554153.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 106498 106770 . + . ID=gene-AD12_RS0123615;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AD12_RS0123615 NZ_JJLK01000057.1 Protein Homology CDS 106498 106770 . + 0 ID=cds-WP_000858002.1;Parent=gene-AD12_RS0123615;Dbxref=GenBank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AD12_RS0123615;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 106799 107065 . + . ID=gene-AD12_RS0123620;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AD12_RS0123620 NZ_JJLK01000057.1 Protein Homology CDS 106799 107065 . + 0 ID=cds-WP_000888772.1;Parent=gene-AD12_RS0123620;Dbxref=GenBank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AD12_RS0123620;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 107178 107426 . + . ID=gene-AD12_RS0123625;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AD12_RS0123625;old_locus_tag=AD12_1356 NZ_JJLK01000057.1 Protein Homology CDS 107178 107426 . + 0 ID=cds-WP_032286419.1;Parent=gene-AD12_RS0123625;Dbxref=GenBank:WP_032286419.1;Name=WP_032286419.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AD12_RS0123625;product=protein YmgC;protein_id=WP_032286419.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 107758 109281 . + . ID=gene-AD12_RS0123630;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=AD12_RS0123630 NZ_JJLK01000057.1 Protein Homology CDS 107758 109281 . + 0 ID=cds-WP_032286420.1;Parent=gene-AD12_RS0123630;Dbxref=GenBank:WP_032286420.1;Name=WP_032286420.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707066.2;locus_tag=AD12_RS0123630;product=EAL domain-containing protein;protein_id=WP_032286420.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 109413 109631 . + . ID=gene-AD12_RS15970;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AD12_RS15970;old_locus_tag=AD12_1358 NZ_JJLK01000057.1 Protein Homology CDS 109413 109631 . + 0 ID=cds-WP_001065861.1;Parent=gene-AD12_RS15970;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AD12_RS15970;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 110031 110240 . + . ID=gene-AD12_RS29800;Name=AD12_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29800;old_locus_tag=AD12_1361 NZ_JJLK01000057.1 Protein Homology CDS 110031 110240 . + 0 ID=cds-WP_001297677.1;Parent=gene-AD12_RS29800;Dbxref=GenBank:WP_001297677.1;Name=WP_001297677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297677.1;locus_tag=AD12_RS29800;product=hypothetical protein;protein_id=WP_001297677.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 110357 112678 . + . ID=gene-AD12_RS15955;Name=AD12_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15955;old_locus_tag=AD12_1362 NZ_JJLK01000057.1 Protein Homology CDS 110357 112678 . + 0 ID=cds-WP_001683996.1;Parent=gene-AD12_RS15955;Dbxref=GenBank:WP_001683996.1;Name=WP_001683996.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=AD12_RS15955;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001683996.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 112735 113070 . - . ID=gene-AD12_RS15950;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AD12_RS15950;old_locus_tag=AD12_1363 NZ_JJLK01000057.1 Protein Homology CDS 112735 113070 . - 0 ID=cds-WP_000979977.1;Parent=gene-AD12_RS15950;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AD12_RS15950;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 113074 113418 . - . ID=gene-AD12_RS15945;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AD12_RS15945;old_locus_tag=AD12_1364 NZ_JJLK01000057.1 Protein Homology CDS 113074 113418 . - 0 ID=cds-WP_000726974.1;Parent=gene-AD12_RS15945;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AD12_RS15945;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 113420 113593 . - . ID=gene-AD12_RS15940;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AD12_RS15940;old_locus_tag=AD12_1365 NZ_JJLK01000057.1 Protein Homology CDS 113420 113593 . - 0 ID=cds-WP_000122462.1;Parent=gene-AD12_RS15940;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AD12_RS15940;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 113694 113879 . + . ID=gene-AD12_RS26470;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AD12_RS26470 NZ_JJLK01000057.1 Protein Homology CDS 113694 113879 . + 0 ID=cds-WP_001325743.1;Parent=gene-AD12_RS26470;Dbxref=GenBank:WP_001325743.1;Name=WP_001325743.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AD12_RS26470;product=protein YmgJ;protein_id=WP_001325743.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 113840 113959 . + . ID=gene-AD12_RS28630;Name=AD12_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28630;old_locus_tag=AD12_1366 NZ_JJLK01000057.1 Protein Homology CDS 113840 113959 . + 0 ID=cds-WP_001131446.1;Parent=gene-AD12_RS28630;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD12_RS28630;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 113994 114338 . + . ID=gene-AD12_RS15935;Name=AD12_RS15935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS15935;old_locus_tag=AD12_1367;partial=true;pseudo=true;start_range=.,113994 NZ_JJLK01000057.1 Protein Homology CDS 113994 114338 . + 0 ID=cds-AD12_RS15935;Parent=gene-AD12_RS15935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AD12_RS15935;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,113994;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 114710 114976 . - . ID=gene-AD12_RS15930;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AD12_RS15930;old_locus_tag=AD12_1368 NZ_JJLK01000057.1 Protein Homology CDS 114710 114976 . - 0 ID=cds-WP_001185665.1;Parent=gene-AD12_RS15930;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AD12_RS15930;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 114980 115792 . - . ID=gene-AD12_RS15925;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AD12_RS15925;old_locus_tag=AD12_1369 NZ_JJLK01000057.1 Protein Homology CDS 114980 115792 . - 0 ID=cds-WP_000101055.1;Parent=gene-AD12_RS15925;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AD12_RS15925;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 115816 116511 . - . ID=gene-AD12_RS15920;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AD12_RS15920;old_locus_tag=AD12_1370 NZ_JJLK01000057.1 Protein Homology CDS 115816 116511 . - 0 ID=cds-WP_000072536.1;Parent=gene-AD12_RS15920;Dbxref=GenBank:WP_000072536.1;Name=WP_000072536.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AD12_RS15920;product=septum site-determining protein MinC;protein_id=WP_000072536.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 117031 117399 . + . ID=gene-AD12_RS15915;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AD12_RS15915;old_locus_tag=AD12_1371 NZ_JJLK01000057.1 Protein Homology CDS 117031 117399 . + 0 ID=cds-WP_001056831.1;Parent=gene-AD12_RS15915;Dbxref=GenBank:WP_001056831.1;Name=WP_001056831.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309698.1;locus_tag=AD12_RS15915;product=YcgJ family protein;protein_id=WP_001056831.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 117519 117920 . - . ID=gene-AD12_RS15910;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AD12_RS15910;old_locus_tag=AD12_1372 NZ_JJLK01000057.1 Protein Homology CDS 117519 117920 . - 0 ID=cds-WP_000695223.1;Parent=gene-AD12_RS15910;Dbxref=GenBank:WP_000695223.1;Name=WP_000695223.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=AD12_RS15910;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695223.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 118162 118455 . + . ID=gene-AD12_RS15905;Name=AD12_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15905;old_locus_tag=AD12_1373 NZ_JJLK01000057.1 Protein Homology CDS 118162 118455 . + 0 ID=cds-WP_001297679.1;Parent=gene-AD12_RS15905;Dbxref=GenBank:WP_001297679.1;Name=WP_001297679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AD12_RS15905;product=YcgL domain-containing protein;protein_id=WP_001297679.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 118527 119186 . + . ID=gene-AD12_RS15900;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AD12_RS15900;old_locus_tag=AD12_1374 NZ_JJLK01000057.1 Protein Homology CDS 118527 119186 . + 0 ID=cds-WP_000284276.1;Parent=gene-AD12_RS15900;Dbxref=GenBank:WP_000284276.1;Name=WP_000284276.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AD12_RS15900;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284276.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 119278 119724 . + . ID=gene-AD12_RS15895;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AD12_RS15895;old_locus_tag=AD12_1375 NZ_JJLK01000057.1 Protein Homology CDS 119278 119724 . + 0 ID=cds-WP_001306825.1;Parent=gene-AD12_RS15895;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AD12_RS15895;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 119931 120841 . - . ID=gene-AD12_RS27955;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=pseudogene;locus_tag=AD12_RS27955;pseudo=true NZ_JJLK01000057.1 Protein Homology CDS 119931 120841 . - 0 ID=cds-AD12_RS27955;Parent=gene-AD12_RS27955;Note=frameshifted;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AD12_RS27955;product=hemolysin HlyE;pseudo=true;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 121214 121633 . + . ID=gene-AD12_RS15880;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AD12_RS15880;old_locus_tag=AD12_1378 NZ_JJLK01000057.1 Protein Homology CDS 121214 121633 . + 0 ID=cds-WP_000897378.1;Parent=gene-AD12_RS15880;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AD12_RS15880;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 121633 122901 . + . ID=gene-AD12_RS15875;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AD12_RS15875;old_locus_tag=AD12_1379 NZ_JJLK01000057.1 Protein Homology CDS 121633 122901 . + 0 ID=cds-WP_000457616.1;Parent=gene-AD12_RS15875;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AD12_RS15875;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 122947 123477 . - . ID=gene-AD12_RS15870;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AD12_RS15870;old_locus_tag=AD12_1380 NZ_JJLK01000057.1 Protein Homology CDS 122947 123477 . - 0 ID=cds-WP_000943462.1;Parent=gene-AD12_RS15870;Dbxref=GenBank:WP_000943462.1;Name=WP_000943462.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707082.2;locus_tag=AD12_RS15870;product=disulfide bond formation protein DsbB;protein_id=WP_000943462.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 123623 125164 . - . ID=gene-AD12_RS15865;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AD12_RS15865;old_locus_tag=AD12_1381 NZ_JJLK01000057.1 Protein Homology CDS 123623 125164 . - 0 ID=cds-WP_000406391.1;Parent=gene-AD12_RS15865;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AD12_RS15865;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 125385 126104 . + . ID=gene-AD12_RS15860;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AD12_RS15860;old_locus_tag=AD12_1382 NZ_JJLK01000057.1 Protein Homology CDS 125385 126104 . + 0 ID=cds-WP_000234823.1;Parent=gene-AD12_RS15860;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AD12_RS15860;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 126156 127688 . - . ID=gene-AD12_RS15855;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AD12_RS15855;old_locus_tag=AD12_1383 NZ_JJLK01000057.1 Protein Homology CDS 126156 127688 . - 0 ID=cds-WP_000190855.1;Parent=gene-AD12_RS15855;Dbxref=GenBank:WP_000190855.1;Name=WP_000190855.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309710.1;locus_tag=AD12_RS15855;product=SpoVR family protein;protein_id=WP_000190855.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 128018 129316 . + . ID=gene-AD12_RS15850;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AD12_RS15850;old_locus_tag=AD12_1384 NZ_JJLK01000057.1 Protein Homology CDS 128018 129316 . + 0 ID=cds-WP_001266908.1;Parent=gene-AD12_RS15850;Dbxref=GenBank:WP_001266908.1;Name=WP_001266908.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AD12_RS15850;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 129326 130396 . + . ID=gene-AD12_RS15845;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AD12_RS15845;old_locus_tag=AD12_1385 NZ_JJLK01000057.1 Protein Homology CDS 129326 130396 . + 0 ID=cds-WP_000197840.1;Parent=gene-AD12_RS15845;Dbxref=GenBank:WP_000197840.1;Name=WP_000197840.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309712.2;locus_tag=AD12_RS15845;product=catabolic alanine racemase DadX;protein_id=WP_000197840.1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 130707 130847 . + . ID=gene-AD12_RS29880;Name=AD12_RS29880;end_range=130847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29880;partial=true;pseudo=true NZ_JJLK01000057.1 Protein Homology CDS 130707 130847 . + 0 ID=cds-AD12_RS29880;Parent=gene-AD12_RS29880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=130847,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AD12_RS29880;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 130782 132518 . - . ID=gene-AD12_RS15840;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AD12_RS15840;old_locus_tag=AD12_1387 NZ_JJLK01000057.1 Protein Homology CDS 130782 132518 . - 0 ID=cds-WP_000340206.1;Parent=gene-AD12_RS15840;Dbxref=GenBank:WP_000340206.1;Name=WP_000340206.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309713.2;locus_tag=AD12_RS15840;product=potassium/proton antiporter;protein_id=WP_000340206.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 132613 133527 . - . ID=gene-AD12_RS15835;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AD12_RS15835;old_locus_tag=AD12_1388 NZ_JJLK01000057.1 Protein Homology CDS 132613 133527 . - 0 ID=cds-WP_000051548.1;Parent=gene-AD12_RS15835;Dbxref=GenBank:WP_000051548.1;Name=WP_000051548.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AD12_RS15835;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051548.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 133627 134238 . + . ID=gene-AD12_RS15830;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AD12_RS15830;old_locus_tag=AD12_1389 NZ_JJLK01000057.1 Protein Homology CDS 133627 134238 . + 0 ID=cds-WP_001295616.1;Parent=gene-AD12_RS15830;Dbxref=GenBank:WP_001295616.1;Name=WP_001295616.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309714.2;locus_tag=AD12_RS15830;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001295616.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 134240 134974 . - . ID=gene-AD12_RS15825;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AD12_RS15825;old_locus_tag=AD12_1390 NZ_JJLK01000057.1 Protein Homology CDS 134240 134974 . - 0 ID=cds-WP_000020161.1;Parent=gene-AD12_RS15825;Dbxref=GenBank:WP_000020161.1;Name=WP_000020161.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AD12_RS15825;product=flagellar brake protein YcgR;protein_id=WP_000020161.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 135175 135429 . + . ID=gene-AD12_RS15820;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AD12_RS15820;old_locus_tag=AD12_1391 NZ_JJLK01000057.1 Protein Homology CDS 135175 135429 . + 0 ID=cds-WP_000511313.1;Parent=gene-AD12_RS15820;Dbxref=GenBank:WP_000511313.1;Name=WP_000511313.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=AD12_RS15820;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511313.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 135607 136047 . + . ID=gene-AD12_RS15815;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AD12_RS15815;old_locus_tag=AD12_1392 NZ_JJLK01000057.1 Protein Homology CDS 135607 136047 . + 0 ID=cds-WP_000615067.1;Parent=gene-AD12_RS15815;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AD12_RS15815;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 136126 137823 . - . ID=gene-AD12_RS15810;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AD12_RS15810;old_locus_tag=AD12_1393 NZ_JJLK01000057.1 Protein Homology CDS 136126 137823 . - 0 ID=cds-WP_000841709.1;Parent=gene-AD12_RS15810;Dbxref=GenBank:WP_000841709.1;Name=WP_000841709.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AD12_RS15810;product=alpha%2Calpha-trehalase;protein_id=WP_000841709.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 138143 139561 . - . ID=gene-AD12_RS0123635;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AD12_RS0123635 NZ_JJLK01000057.1 Protein Homology CDS 138143 139561 . - 0 ID=cds-WP_001299308.1;Parent=gene-AD12_RS0123635;Dbxref=GenBank:WP_001299308.1;Name=WP_001299308.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AD12_RS0123635;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001299308.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 139572 140204 . - . ID=gene-AD12_RS15805;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AD12_RS15805;old_locus_tag=AD12_1396 NZ_JJLK01000057.1 Protein Homology CDS 139572 140204 . - 0 ID=cds-WP_000059412.1;Parent=gene-AD12_RS15805;Dbxref=GenBank:WP_000059412.1;Name=WP_000059412.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AD12_RS15805;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059412.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 140215 141285 . - . ID=gene-AD12_RS15800;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AD12_RS15800;old_locus_tag=AD12_1397 NZ_JJLK01000057.1 Protein Homology CDS 140215 141285 . - 0 ID=cds-WP_000733725.1;Parent=gene-AD12_RS15800;Dbxref=GenBank:WP_000733725.1;Name=WP_000733725.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AD12_RS15800;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733725.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 141513 143432 . + . ID=gene-AD12_RS15795;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AD12_RS15795;old_locus_tag=AD12_1398 NZ_JJLK01000057.1 Protein Homology CDS 141513 143432 . + 0 ID=cds-WP_001297537.1;Parent=gene-AD12_RS15795;Dbxref=GenBank:WP_001297537.1;Name=WP_001297537.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AD12_RS15795;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001297537.1;transl_table=11 NZ_JJLK01000057.1 RefSeq pseudogene 143532 146417 . - . ID=gene-AD12_RS0123640;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=pseudogene;locus_tag=AD12_RS0123640;pseudo=true NZ_JJLK01000057.1 Protein Homology CDS 143532 146417 . - 0 ID=cds-AD12_RS0123640;Parent=gene-AD12_RS0123640;Note=internal stop;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AD12_RS0123640;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 147258 148349 . - . ID=gene-AD12_RS15785;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AD12_RS15785;old_locus_tag=AD12_1402 NZ_JJLK01000057.1 Protein Homology CDS 147258 148349 . - 0 ID=cds-WP_000505866.1;Parent=gene-AD12_RS15785;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AD12_RS15785;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 148466 149050 . - . ID=gene-AD12_RS15780;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AD12_RS15780;old_locus_tag=AD12_1403 NZ_JJLK01000057.1 Protein Homology CDS 148466 149050 . - 0 ID=cds-WP_000152933.1;Parent=gene-AD12_RS15780;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AD12_RS15780;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 149328 149606 . + . ID=gene-AD12_RS15775;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AD12_RS15775;old_locus_tag=AD12_1404 NZ_JJLK01000057.1 Protein Homology CDS 149328 149606 . + 0 ID=cds-WP_000823885.1;Parent=gene-AD12_RS15775;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AD12_RS15775;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 149661 151340 . - . ID=gene-AD12_RS15770;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AD12_RS15770;old_locus_tag=AD12_1405 NZ_JJLK01000057.1 Protein Homology CDS 149661 151340 . - 0 ID=cds-WP_001033352.1;Parent=gene-AD12_RS15770;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AD12_RS15770;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 151465 152412 . - . ID=gene-AD12_RS15765;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AD12_RS15765;old_locus_tag=AD12_1406 NZ_JJLK01000057.1 Protein Homology CDS 151465 152412 . - 0 ID=cds-WP_001298109.1;Parent=gene-AD12_RS15765;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AD12_RS15765;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 152563 153414 . - . ID=gene-AD12_RS15760;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AD12_RS15760;old_locus_tag=AD12_1407 NZ_JJLK01000057.1 Protein Homology CDS 152563 153414 . - 0 ID=cds-WP_032286421.1;Parent=gene-AD12_RS15760;Dbxref=GenBank:WP_032286421.1;Name=WP_032286421.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=AD12_RS15760;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_032286421.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 153414 154037 . - . ID=gene-AD12_RS15755;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AD12_RS15755;old_locus_tag=AD12_1408 NZ_JJLK01000057.1 Protein Homology CDS 153414 154037 . - 0 ID=cds-WP_001130686.1;Parent=gene-AD12_RS15755;Dbxref=GenBank:WP_001130686.1;Name=WP_001130686.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AD12_RS15755;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130686.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 154251 155507 . + . ID=gene-AD12_RS15750;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AD12_RS15750;old_locus_tag=AD12_1409 NZ_JJLK01000057.1 Protein Homology CDS 154251 155507 . + 0 ID=cds-WP_001324480.1;Parent=gene-AD12_RS15750;Dbxref=GenBank:WP_001324480.1;Name=WP_001324480.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AD12_RS15750;product=glutamyl-tRNA reductase;protein_id=WP_001324480.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 155549 156631 . + . ID=gene-AD12_RS15745;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AD12_RS15745;old_locus_tag=AD12_1410 NZ_JJLK01000057.1 Protein Homology CDS 155549 156631 . + 0 ID=cds-WP_000804726.1;Parent=gene-AD12_RS15745;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AD12_RS15745;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 156631 157464 . + . ID=gene-AD12_RS15740;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AD12_RS15740;old_locus_tag=AD12_1411 NZ_JJLK01000057.1 Protein Homology CDS 156631 157464 . + 0 ID=cds-WP_000456448.1;Parent=gene-AD12_RS15740;Dbxref=GenBank:WP_000456448.1;Name=WP_000456448.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309744.1;locus_tag=AD12_RS15740;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456448.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 157461 157853 . + . ID=gene-AD12_RS15735;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AD12_RS15735;old_locus_tag=AD12_1412 NZ_JJLK01000057.1 Protein Homology CDS 157461 157853 . + 0 ID=cds-WP_000200376.1;Parent=gene-AD12_RS15735;Dbxref=GenBank:WP_000200376.1;Name=WP_000200376.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AD12_RS15735;product=invasion regulator SirB2;protein_id=WP_000200376.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 157857 158666 . + . ID=gene-AD12_RS15730;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AD12_RS15730;old_locus_tag=AD12_1413 NZ_JJLK01000057.1 Protein Homology CDS 157857 158666 . + 0 ID=cds-WP_032286422.1;Parent=gene-AD12_RS15730;Dbxref=GenBank:WP_032286422.1;Name=WP_032286422.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AD12_RS15730;product=invasion regulator SirB1;protein_id=WP_032286422.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 158702 159556 . + . ID=gene-AD12_RS15725;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AD12_RS15725;old_locus_tag=AD12_1414 NZ_JJLK01000057.1 Protein Homology CDS 158702 159556 . + 0 ID=cds-WP_000811065.1;Parent=gene-AD12_RS15725;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AD12_RS15725;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 159704 159811 . - . ID=gene-AD12_RS15720;Name=AD12_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15720;old_locus_tag=AD12_1415 NZ_JJLK01000057.1 Protein Homology CDS 159704 159811 . - 0 ID=cds-WP_000170954.1;Parent=gene-AD12_RS15720;Dbxref=GenBank:WP_000170954.1;Name=WP_000170954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=AD12_RS15720;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170954.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 160216 161316 . - . ID=gene-AD12_RS15715;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AD12_RS15715;old_locus_tag=AD12_1416 NZ_JJLK01000057.1 Protein Homology CDS 160216 161316 . - 0 ID=cds-WP_001713296.1;Parent=gene-AD12_RS15715;Dbxref=GenBank:WP_001713296.1;Name=WP_001713296.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=AD12_RS15715;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_001713296.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 161586 161816 . + . ID=gene-AD12_RS15710;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AD12_RS15710;old_locus_tag=AD12_1417 NZ_JJLK01000057.1 Protein Homology CDS 161586 161816 . + 0 ID=cds-WP_001146442.1;Parent=gene-AD12_RS15710;Dbxref=GenBank:WP_001146442.1;Name=WP_001146442.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AD12_RS15710;product=putative cation transport regulator ChaB;protein_id=WP_001146442.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 161974 162669 . + . ID=gene-AD12_RS15705;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AD12_RS15705;old_locus_tag=AD12_1418 NZ_JJLK01000057.1 Protein Homology CDS 161974 162669 . + 0 ID=cds-WP_001297117.1;Parent=gene-AD12_RS15705;Dbxref=GenBank:WP_001297117.1;Name=WP_001297117.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AD12_RS15705;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001297117.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 162713 163066 . - . ID=gene-AD12_RS15700;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AD12_RS15700;old_locus_tag=AD12_1419 NZ_JJLK01000057.1 Protein Homology CDS 162713 163066 . - 0 ID=cds-WP_001169669.1;Parent=gene-AD12_RS15700;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AD12_RS15700;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 163251 164645 . + . ID=gene-AD12_RS15695;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AD12_RS15695;old_locus_tag=AD12_1420 NZ_JJLK01000057.1 Protein Homology CDS 163251 164645 . + 0 ID=cds-WP_000086202.1;Parent=gene-AD12_RS15695;Dbxref=GenBank:WP_000086202.1;Name=WP_000086202.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AD12_RS15695;product=inverse autotransporter invasin YchO;protein_id=WP_000086202.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 164646 165296 . - . ID=gene-AD12_RS15690;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AD12_RS15690;old_locus_tag=AD12_1421 NZ_JJLK01000057.1 Protein Homology CDS 164646 165296 . - 0 ID=cds-WP_000070491.1;Parent=gene-AD12_RS15690;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AD12_RS15690;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 165289 167085 . - . ID=gene-AD12_RS15685;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AD12_RS15685;old_locus_tag=AD12_1422 NZ_JJLK01000057.1 Protein Homology CDS 165289 167085 . - 0 ID=cds-WP_000918073.1;Parent=gene-AD12_RS15685;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AD12_RS15685;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 167424 168815 . + . ID=gene-AD12_RS15680;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AD12_RS15680;old_locus_tag=AD12_1423 NZ_JJLK01000057.1 Protein Homology CDS 167424 168815 . + 0 ID=cds-WP_000019827.1;Parent=gene-AD12_RS15680;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AD12_RS15680;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 169208 172951 . + . ID=gene-AD12_RS15675;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AD12_RS15675;old_locus_tag=AD12_1424 NZ_JJLK01000057.1 Protein Homology CDS 169208 172951 . + 0 ID=cds-WP_000032922.1;Parent=gene-AD12_RS15675;Dbxref=GenBank:WP_000032922.1;Name=WP_000032922.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=AD12_RS15675;product=nitrate reductase subunit alpha;protein_id=WP_000032922.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 172948 174486 . + . ID=gene-AD12_RS15670;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD12_RS15670;old_locus_tag=AD12_1425 NZ_JJLK01000057.1 Protein Homology CDS 172948 174486 . + 0 ID=cds-WP_000702650.1;Parent=gene-AD12_RS15670;Dbxref=GenBank:WP_000702650.1;Name=WP_000702650.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415743.1;locus_tag=AD12_RS15670;product=nitrate reductase subunit beta;protein_id=WP_000702650.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 174483 175193 . + . ID=gene-AD12_RS15665;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AD12_RS15665;old_locus_tag=AD12_1426 NZ_JJLK01000057.1 Protein Homology CDS 174483 175193 . + 0 ID=cds-WP_000571680.1;Parent=gene-AD12_RS15665;Dbxref=GenBank:WP_000571680.1;Name=WP_000571680.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AD12_RS15665;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571680.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 175193 175870 . + . ID=gene-AD12_RS15660;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD12_RS15660;old_locus_tag=AD12_1427 NZ_JJLK01000057.1 Protein Homology CDS 175193 175870 . + 0 ID=cds-WP_001160110.1;Parent=gene-AD12_RS15660;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AD12_RS15660;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JJLK01000057.1 RefSeq gene 176054 176185 . - . ID=gene-AD12_RS25625;Name=AD12_RS25625;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25625 NZ_JJLK01000057.1 cmsearch ncRNA 176054 176185 . - . ID=rna-AD12_RS25625;Parent=gene-AD12_RS25625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25625;product=RtT sRNA NZ_JJLK01000057.1 cmsearch exon 176054 176185 . - . ID=exon-AD12_RS25625-1;Parent=rna-AD12_RS25625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25625;product=RtT sRNA NZ_JJLK01000057.1 RefSeq gene 176232 176363 . - . ID=gene-AD12_RS25630;Name=AD12_RS25630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25630 NZ_JJLK01000057.1 cmsearch ncRNA 176232 176363 . - . ID=rna-AD12_RS25630;Parent=gene-AD12_RS25630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25630;product=RtT sRNA NZ_JJLK01000057.1 cmsearch exon 176232 176363 . - . ID=exon-AD12_RS25630-1;Parent=rna-AD12_RS25630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25630;product=RtT sRNA ##sequence-region NZ_JJLK01000058.1 1 138675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000058.1 RefSeq region 1 138675 . + . ID=NZ_JJLK01000058.1:1..138675;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000058.1 RefSeq gene 1 118 . - . ID=gene-AD12_RS25640;Name=AD12_RS25640;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25640;partial=true;start_range=.,1 NZ_JJLK01000058.1 cmsearch ncRNA 1 118 . - . ID=rna-AD12_RS25640;Parent=gene-AD12_RS25640;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25640;partial=true;product=RtT sRNA;start_range=.,1 NZ_JJLK01000058.1 cmsearch exon 1 118 . - . ID=exon-AD12_RS25640-1;Parent=rna-AD12_RS25640;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25640;partial=true;product=RtT sRNA;start_range=.,1 NZ_JJLK01000058.1 RefSeq gene 165 249 . - . ID=gene-AD12_RS15655;Name=AD12_RS15655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS15655;old_locus_tag=AD12_1428 NZ_JJLK01000058.1 tRNAscan-SE tRNA 165 249 . - . ID=rna-AD12_RS15655;Parent=gene-AD12_RS15655;anticodon=(pos:complement(213..215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15655;product=tRNA-Tyr NZ_JJLK01000058.1 tRNAscan-SE exon 165 249 . - . ID=exon-AD12_RS15655-1;Parent=rna-AD12_RS15655;anticodon=(pos:complement(213..215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15655;product=tRNA-Tyr NZ_JJLK01000058.1 RefSeq gene 284 368 . - . ID=gene-AD12_RS15650;Name=AD12_RS15650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS15650;old_locus_tag=AD12_1429 NZ_JJLK01000058.1 tRNAscan-SE tRNA 284 368 . - . ID=rna-AD12_RS15650;Parent=gene-AD12_RS15650;anticodon=(pos:complement(332..334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15650;product=tRNA-Tyr NZ_JJLK01000058.1 tRNAscan-SE exon 284 368 . - . ID=exon-AD12_RS15650-1;Parent=rna-AD12_RS15650;anticodon=(pos:complement(332..334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15650;product=tRNA-Tyr NZ_JJLK01000058.1 RefSeq gene 403 487 . - . ID=gene-AD12_RS15645;Name=AD12_RS15645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS15645;old_locus_tag=AD12_1430 NZ_JJLK01000058.1 tRNAscan-SE tRNA 403 487 . - . ID=rna-AD12_RS15645;Parent=gene-AD12_RS15645;anticodon=(pos:complement(451..453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15645;product=tRNA-Tyr NZ_JJLK01000058.1 tRNAscan-SE exon 403 487 . - . ID=exon-AD12_RS15645-1;Parent=rna-AD12_RS15645;anticodon=(pos:complement(451..453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15645;product=tRNA-Tyr NZ_JJLK01000058.1 RefSeq gene 522 606 . - . ID=gene-AD12_RS15640;Name=AD12_RS15640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS15640;old_locus_tag=AD12_1431 NZ_JJLK01000058.1 tRNAscan-SE tRNA 522 606 . - . ID=rna-AD12_RS15640;Parent=gene-AD12_RS15640;anticodon=(pos:complement(570..572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15640;product=tRNA-Tyr NZ_JJLK01000058.1 tRNAscan-SE exon 522 606 . - . ID=exon-AD12_RS15640-1;Parent=rna-AD12_RS15640;anticodon=(pos:complement(570..572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS15640;product=tRNA-Tyr NZ_JJLK01000058.1 RefSeq gene 766 1608 . - . ID=gene-AD12_RS15635;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AD12_RS15635;old_locus_tag=AD12_1432 NZ_JJLK01000058.1 Protein Homology CDS 766 1608 . - 0 ID=cds-WP_000555849.1;Parent=gene-AD12_RS15635;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AD12_RS15635;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 1658 2116 . - . ID=gene-AD12_RS0123680;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AD12_RS0123680;old_locus_tag=AD12_1433 NZ_JJLK01000058.1 Protein Homology CDS 1658 2116 . - 0 ID=cds-WP_001307143.1;Parent=gene-AD12_RS0123680;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AD12_RS0123680;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 2229 3134 . + . ID=gene-AD12_RS15630;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AD12_RS15630;old_locus_tag=AD12_1434 NZ_JJLK01000058.1 Protein Homology CDS 2229 3134 . + 0 ID=cds-WP_001226476.1;Parent=gene-AD12_RS15630;Dbxref=GenBank:WP_001226476.1;Name=WP_001226476.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AD12_RS15630;product=patatin-like phospholipase RssA;protein_id=WP_001226476.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 3226 4239 . + . ID=gene-AD12_RS15625;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AD12_RS15625;old_locus_tag=AD12_1435 NZ_JJLK01000058.1 Protein Homology CDS 3226 4239 . + 0 ID=cds-WP_000193447.1;Parent=gene-AD12_RS15625;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AD12_RS15625;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 4441 5349 . + . ID=gene-AD12_RS15620;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AD12_RS15620;old_locus_tag=AD12_1436 NZ_JJLK01000058.1 Protein Homology CDS 4441 5349 . + 0 ID=cds-WP_000718995.1;Parent=gene-AD12_RS15620;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AD12_RS15620;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 5493 5906 . - . ID=gene-AD12_RS15615;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AD12_RS15615;old_locus_tag=AD12_1437 NZ_JJLK01000058.1 Protein Homology CDS 5493 5906 . - 0 ID=cds-WP_001287378.1;Parent=gene-AD12_RS15615;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AD12_RS15615;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 6510 7127 . + . ID=gene-AD12_RS15610;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AD12_RS15610;old_locus_tag=AD12_1439 NZ_JJLK01000058.1 Protein Homology CDS 6510 7127 . + 0 ID=cds-WP_000068067.1;Parent=gene-AD12_RS15610;Dbxref=GenBank:WP_000068067.1;Name=WP_000068067.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=AD12_RS15610;product=thymidine kinase;protein_id=WP_000068067.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 7429 10104 . - . ID=gene-AD12_RS15605;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AD12_RS15605;old_locus_tag=AD12_1440 NZ_JJLK01000058.1 Protein Homology CDS 7429 10104 . - 0 ID=cds-WP_000301651.1;Parent=gene-AD12_RS15605;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AD12_RS15605;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 10497 10550 . + . ID=gene-AD12_RS29240;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AD12_RS29240 NZ_JJLK01000058.1 Protein Homology CDS 10497 10550 . + 0 ID=cds-WP_211180492.1;Parent=gene-AD12_RS29240;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AD12_RS29240;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 10581 11228 . + . ID=gene-AD12_RS15600;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AD12_RS15600;old_locus_tag=AD12_1441 NZ_JJLK01000058.1 Protein Homology CDS 10581 11228 . + 0 ID=cds-WP_000616560.1;Parent=gene-AD12_RS15600;Dbxref=GenBank:WP_000616560.1;Name=WP_000616560.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AD12_RS15600;product=NAAT family transporter YchE;protein_id=WP_000616560.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 11966 13597 . + . ID=gene-AD12_RS15595;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AD12_RS15595;old_locus_tag=AD12_1443 NZ_JJLK01000058.1 Protein Homology CDS 11966 13597 . + 0 ID=cds-WP_001297114.1;Parent=gene-AD12_RS15595;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AD12_RS15595;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 13683 14603 . + . ID=gene-AD12_RS15590;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AD12_RS15590;old_locus_tag=AD12_1444 NZ_JJLK01000058.1 Protein Homology CDS 13683 14603 . + 0 ID=cds-WP_000911112.1;Parent=gene-AD12_RS15590;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AD12_RS15590;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 14618 15526 . + . ID=gene-AD12_RS15585;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AD12_RS15585;old_locus_tag=AD12_1445 NZ_JJLK01000058.1 Protein Homology CDS 14618 15526 . + 0 ID=cds-WP_000979661.1;Parent=gene-AD12_RS15585;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AD12_RS15585;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 15538 16551 . + . ID=gene-AD12_RS15580;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AD12_RS15580;old_locus_tag=AD12_1446 NZ_JJLK01000058.1 Protein Homology CDS 15538 16551 . + 0 ID=cds-WP_000110945.1;Parent=gene-AD12_RS15580;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AD12_RS15580;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 16548 17552 . + . ID=gene-AD12_RS15575;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AD12_RS15575;old_locus_tag=AD12_1447 NZ_JJLK01000058.1 Protein Homology CDS 16548 17552 . + 0 ID=cds-WP_000994905.1;Parent=gene-AD12_RS15575;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AD12_RS15575;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 17605 17934 . - . ID=gene-AD12_RS15570;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AD12_RS15570;old_locus_tag=AD12_1448 NZ_JJLK01000058.1 Protein Homology CDS 17605 17934 . - 0 ID=cds-WP_000366959.1;Parent=gene-AD12_RS15570;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AD12_RS15570;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 17969 19429 . - . ID=gene-AD12_RS15565;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AD12_RS15565;old_locus_tag=AD12_1449 NZ_JJLK01000058.1 Protein Homology CDS 17969 19429 . - 0 ID=cds-WP_000214516.1;Parent=gene-AD12_RS15565;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AD12_RS15565;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 19572 19745 . + . ID=gene-AD12_RS28635;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AD12_RS28635 NZ_JJLK01000058.1 Protein Homology CDS 19572 19745 . + 0 ID=cds-WP_001309467.1;Parent=gene-AD12_RS28635;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AD12_RS28635;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 19800 21053 . - . ID=gene-AD12_RS15560;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AD12_RS15560;old_locus_tag=AD12_1450 NZ_JJLK01000058.1 Protein Homology CDS 19800 21053 . - 0 ID=cds-WP_000020078.1;Parent=gene-AD12_RS15560;Dbxref=GenBank:WP_000020078.1;Name=WP_000020078.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=AD12_RS15560;product=voltage-gated potassium channel protein;protein_id=WP_000020078.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 21353 21649 . - . ID=gene-AD12_RS15555;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AD12_RS15555;old_locus_tag=AD12_1451 NZ_JJLK01000058.1 Protein Homology CDS 21353 21649 . - 0 ID=cds-WP_000967595.1;Parent=gene-AD12_RS15555;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AD12_RS15555;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 21873 22592 . + . ID=gene-AD12_RS15550;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AD12_RS15550;old_locus_tag=AD12_1452 NZ_JJLK01000058.1 Protein Homology CDS 21873 22592 . + 0 ID=cds-WP_000171273.1;Parent=gene-AD12_RS15550;Dbxref=GenBank:WP_000171273.1;Name=WP_000171273.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AD12_RS15550;product=TonB system transport protein TonB;protein_id=WP_000171273.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 22632 23030 . - . ID=gene-AD12_RS15545;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AD12_RS15545;old_locus_tag=AD12_1453 NZ_JJLK01000058.1 Protein Homology CDS 22632 23030 . - 0 ID=cds-WP_000108160.1;Parent=gene-AD12_RS15545;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AD12_RS15545;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 23135 23674 . - . ID=gene-AD12_RS15540;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AD12_RS15540;old_locus_tag=AD12_1454 NZ_JJLK01000058.1 Protein Homology CDS 23135 23674 . - 0 ID=cds-WP_000808667.1;Parent=gene-AD12_RS15540;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AD12_RS15540;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 23704 24447 . - . ID=gene-AD12_RS15535;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AD12_RS15535;old_locus_tag=AD12_1455 NZ_JJLK01000058.1 Protein Homology CDS 23704 24447 . - 0 ID=cds-WP_000028540.1;Parent=gene-AD12_RS15535;Dbxref=GenBank:WP_000028540.1;Name=WP_000028540.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AD12_RS15535;product=YciC family protein;protein_id=WP_000028540.1;transl_table=11 NZ_JJLK01000058.1 RefSeq pseudogene 24475 24564 . - . ID=gene-AD12_RS26500;Name=AD12_RS26500;end_range=24564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS26500;partial=true;pseudo=true NZ_JJLK01000058.1 Protein Homology CDS 24475 24564 . - 0 ID=cds-AD12_RS26500;Parent=gene-AD12_RS26500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=24564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AD12_RS26500;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 24804 25442 . + . ID=gene-AD12_RS15530;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AD12_RS15530;old_locus_tag=AD12_1456 NZ_JJLK01000058.1 Protein Homology CDS 24804 25442 . + 0 ID=cds-WP_000737226.1;Parent=gene-AD12_RS15530;Dbxref=GenBank:WP_000737226.1;Name=WP_000737226.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AD12_RS15530;product=outer membrane protein OmpW;protein_id=WP_000737226.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 25502 26008 . - . ID=gene-AD12_RS15525;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AD12_RS15525;old_locus_tag=AD12_1457 NZ_JJLK01000058.1 Protein Homology CDS 25502 26008 . - 0 ID=cds-WP_001079504.1;Parent=gene-AD12_RS15525;Dbxref=GenBank:WP_001079504.1;Name=WP_001079504.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309856.1;locus_tag=AD12_RS15525;product=ferritin-like domain-containing protein;protein_id=WP_001079504.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 26054 26554 . - . ID=gene-AD12_RS15520;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AD12_RS15520;old_locus_tag=AD12_1458 NZ_JJLK01000058.1 Protein Homology CDS 26054 26554 . - 0 ID=cds-WP_001056491.1;Parent=gene-AD12_RS15520;Dbxref=GenBank:WP_001056491.1;Name=WP_001056491.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309857.1;locus_tag=AD12_RS15520;product=ferritin-like domain-containing protein;protein_id=WP_001056491.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 26640 26819 . - . ID=gene-AD12_RS15515;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AD12_RS15515;old_locus_tag=AD12_1459 NZ_JJLK01000058.1 Protein Homology CDS 26640 26819 . - 0 ID=cds-WP_000807651.1;Parent=gene-AD12_RS15515;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AD12_RS15515;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 27200 28006 . - . ID=gene-AD12_RS15510;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AD12_RS15510;old_locus_tag=AD12_1460 NZ_JJLK01000058.1 Protein Homology CDS 27200 28006 . - 0 ID=cds-WP_000443056.1;Parent=gene-AD12_RS15510;Dbxref=GenBank:WP_000443056.1;Name=WP_000443056.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AD12_RS15510;product=tryptophan synthase subunit alpha;protein_id=WP_000443056.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 28006 29199 . - . ID=gene-AD12_RS15505;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AD12_RS15505;old_locus_tag=AD12_1461 NZ_JJLK01000058.1 Protein Homology CDS 28006 29199 . - 0 ID=cds-WP_000209520.1;Parent=gene-AD12_RS15505;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AD12_RS15505;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 29211 30572 . - . ID=gene-AD12_RS15500;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AD12_RS15500;old_locus_tag=AD12_1462 NZ_JJLK01000058.1 Protein Homology CDS 29211 30572 . - 0 ID=cds-WP_000983908.1;Parent=gene-AD12_RS15500;Dbxref=GenBank:WP_000983908.1;Name=WP_000983908.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707171.1;locus_tag=AD12_RS15500;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_000983908.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 30573 32168 . - . ID=gene-AD12_RS15495;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AD12_RS15495;old_locus_tag=AD12_1463 NZ_JJLK01000058.1 Protein Homology CDS 30573 32168 . - 0 ID=cds-WP_000763511.1;Parent=gene-AD12_RS15495;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AD12_RS15495;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 32168 33730 . - . ID=gene-AD12_RS15490;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AD12_RS15490;old_locus_tag=AD12_1464 NZ_JJLK01000058.1 Protein Homology CDS 32168 33730 . - 0 ID=cds-WP_032286425.1;Parent=gene-AD12_RS15490;Dbxref=GenBank:WP_032286425.1;Name=WP_032286425.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AD12_RS15490;product=anthranilate synthase component I;protein_id=WP_032286425.1;transl_table=11 NZ_JJLK01000058.1 cmsearch sequence_feature 33751 33844 . - . ID=id-NZ_JJLK01000058.1:33751..33844;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000058.1 RefSeq gene 33821 33865 . - . ID=gene-AD12_RS26505;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AD12_RS26505 NZ_JJLK01000058.1 Protein Homology CDS 33821 33865 . - 0 ID=cds-WP_001700591.1;Parent=gene-AD12_RS26505;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AD12_RS26505;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 34003 34884 . + . ID=gene-AD12_RS15485;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AD12_RS15485;old_locus_tag=AD12_1465 NZ_JJLK01000058.1 Protein Homology CDS 34003 34884 . + 0 ID=cds-WP_001285661.1;Parent=gene-AD12_RS15485;Dbxref=GenBank:WP_001285661.1;Name=WP_001285661.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AD12_RS15485;product=RNase RNM;protein_id=WP_001285661.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 34881 35501 . + . ID=gene-AD12_RS15480;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AD12_RS15480;old_locus_tag=AD12_1466 NZ_JJLK01000058.1 Protein Homology CDS 34881 35501 . + 0 ID=cds-WP_001295575.1;Parent=gene-AD12_RS15480;Dbxref=GenBank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AD12_RS15480;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 35602 36474 . + . ID=gene-AD12_RS15475;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AD12_RS15475;old_locus_tag=AD12_1467 NZ_JJLK01000058.1 Protein Homology CDS 35602 36474 . + 0 ID=cds-WP_001291216.1;Parent=gene-AD12_RS15475;Dbxref=GenBank:WP_001291216.1;Name=WP_001291216.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309868.1;locus_tag=AD12_RS15475;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291216.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 36514 37104 . - . ID=gene-AD12_RS15470;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AD12_RS15470;old_locus_tag=AD12_1468 NZ_JJLK01000058.1 Protein Homology CDS 36514 37104 . - 0 ID=cds-WP_001278904.1;Parent=gene-AD12_RS15470;Dbxref=GenBank:WP_001278904.1;Name=WP_001278904.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AD12_RS15470;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278904.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 37101 37859 . - . ID=gene-AD12_RS15465;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AD12_RS15465;old_locus_tag=AD12_1469 NZ_JJLK01000058.1 Protein Homology CDS 37101 37859 . - 0 ID=cds-WP_000559280.1;Parent=gene-AD12_RS15465;Dbxref=GenBank:WP_000559280.1;Name=WP_000559280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AD12_RS15465;product=YciK family oxidoreductase;protein_id=WP_000559280.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 38079 39128 . + . ID=gene-AD12_RS15460;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AD12_RS15460;old_locus_tag=AD12_1470 NZ_JJLK01000058.1 Protein Homology CDS 38079 39128 . + 0 ID=cds-WP_000422045.1;Parent=gene-AD12_RS15460;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AD12_RS15460;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 39164 39415 . - . ID=gene-AD12_RS15455;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AD12_RS15455;old_locus_tag=AD12_1471 NZ_JJLK01000058.1 Protein Homology CDS 39164 39415 . - 0 ID=cds-WP_001031530.1;Parent=gene-AD12_RS15455;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AD12_RS15455;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 39795 42392 . + . ID=gene-AD12_RS15450;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AD12_RS15450;old_locus_tag=AD12_1473 NZ_JJLK01000058.1 Protein Homology CDS 39795 42392 . + 0 ID=cds-WP_001297122.1;Parent=gene-AD12_RS15450;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AD12_RS15450;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 42602 43576 . + . ID=gene-AD12_RS15445;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AD12_RS15445;old_locus_tag=AD12_1474 NZ_JJLK01000058.1 Protein Homology CDS 42602 43576 . + 0 ID=cds-WP_000776253.1;Parent=gene-AD12_RS15445;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AD12_RS15445;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 43895 44035 . + . ID=gene-AD12_RS15440;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AD12_RS15440;old_locus_tag=AD12_1475 NZ_JJLK01000058.1 Protein Homology CDS 43895 44035 . + 0 ID=cds-WP_001300896.1;Parent=gene-AD12_RS15440;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AD12_RS15440;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 44038 44205 . + . ID=gene-AD12_RS15435;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AD12_RS15435;old_locus_tag=AD12_1476 NZ_JJLK01000058.1 Protein Homology CDS 44038 44205 . + 0 ID=cds-WP_001297116.1;Parent=gene-AD12_RS15435;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AD12_RS15435;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 44319 44414 . + . ID=gene-AD12_RS28640;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AD12_RS28640 NZ_JJLK01000058.1 Protein Homology CDS 44319 44414 . + 0 ID=cds-WP_001310756.1;Parent=gene-AD12_RS28640;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AD12_RS28640;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 44578 47253 . + . ID=gene-AD12_RS15430;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AD12_RS15430;old_locus_tag=AD12_1477 NZ_JJLK01000058.1 Protein Homology CDS 44578 47253 . + 0 ID=cds-WP_000099521.1;Parent=gene-AD12_RS15430;Dbxref=GenBank:WP_000099521.1;Name=WP_000099521.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AD12_RS15430;product=aconitate hydratase AcnA;protein_id=WP_000099521.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 47317 47907 . - . ID=gene-AD12_RS15425;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AD12_RS15425;old_locus_tag=AD12_1478 NZ_JJLK01000058.1 Protein Homology CDS 47317 47907 . - 0 ID=cds-WP_001176295.1;Parent=gene-AD12_RS15425;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AD12_RS15425;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 48077 48841 . + . ID=gene-AD12_RS15420;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AD12_RS15420;old_locus_tag=AD12_1479 NZ_JJLK01000058.1 Protein Homology CDS 48077 48841 . + 0 ID=cds-WP_001256538.1;Parent=gene-AD12_RS15420;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AD12_RS15420;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 48990 49298 . + . ID=gene-AD12_RS15415;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AD12_RS15415;old_locus_tag=AD12_1481 NZ_JJLK01000058.1 Protein Homology CDS 48990 49298 . + 0 ID=cds-WP_000876286.1;Parent=gene-AD12_RS15415;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AD12_RS15415;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 49305 50474 . + . ID=gene-AD12_RS15410;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AD12_RS15410;old_locus_tag=AD12_1482 NZ_JJLK01000058.1 Protein Homology CDS 49305 50474 . + 0 ID=cds-WP_000891353.1;Parent=gene-AD12_RS15410;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AD12_RS15410;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 50667 51404 . + . ID=gene-AD12_RS15405;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AD12_RS15405;old_locus_tag=AD12_1484 NZ_JJLK01000058.1 Protein Homology CDS 50667 51404 . + 0 ID=cds-WP_000176278.1;Parent=gene-AD12_RS15405;Dbxref=GenBank:WP_000176278.1;Name=WP_000176278.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AD12_RS15405;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176278.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 51404 51730 . + . ID=gene-AD12_RS15400;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AD12_RS15400;old_locus_tag=AD12_1485 NZ_JJLK01000058.1 Protein Homology CDS 51404 51730 . + 0 ID=cds-WP_001295580.1;Parent=gene-AD12_RS15400;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AD12_RS15400;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 51856 52074 . - . ID=gene-AD12_RS15395;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AD12_RS15395;old_locus_tag=AD12_1486 NZ_JJLK01000058.1 Protein Homology CDS 51856 52074 . - 0 ID=cds-WP_000498253.1;Parent=gene-AD12_RS15395;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AD12_RS15395;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 52343 53092 . - . ID=gene-AD12_RS15390;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AD12_RS15390;old_locus_tag=AD12_1487 NZ_JJLK01000058.1 Protein Homology CDS 52343 53092 . - 0 ID=cds-WP_001088621.1;Parent=gene-AD12_RS15390;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AD12_RS15390;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 53182 53355 . - . ID=gene-AD12_RS15385;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AD12_RS15385;old_locus_tag=AD12_1488 NZ_JJLK01000058.1 Protein Homology CDS 53182 53355 . - 0 ID=cds-WP_001288368.1;Parent=gene-AD12_RS15385;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AD12_RS15385;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 53392 53520 . + . ID=gene-AD12_RS29245;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AD12_RS29245 NZ_JJLK01000058.1 Protein Homology CDS 53392 53520 . + 0 ID=cds-WP_211180493.1;Parent=gene-AD12_RS29245;Dbxref=GenBank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AD12_RS29245;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 53502 55487 . - . ID=gene-AD12_RS15380;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AD12_RS15380;old_locus_tag=AD12_1489 NZ_JJLK01000058.1 Protein Homology CDS 53502 55487 . - 0 ID=cds-WP_000859945.1;Parent=gene-AD12_RS15380;Dbxref=GenBank:WP_000859945.1;Name=WP_000859945.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=AD12_RS15380;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000859945.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 55541 55645 . + . ID=gene-AD12_RS27970;Name=AD12_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS27970 NZ_JJLK01000058.1 Protein Homology CDS 55541 55645 . + 0 ID=cds-WP_000221855.1;Parent=gene-AD12_RS27970;Dbxref=GenBank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AD12_RS27970;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 55723 57657 . - . ID=gene-AD12_RS15375;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AD12_RS15375;old_locus_tag=AD12_1490 NZ_JJLK01000058.1 Protein Homology CDS 55723 57657 . - 0 ID=cds-WP_032286426.1;Parent=gene-AD12_RS15375;Dbxref=GenBank:WP_032286426.1;Name=WP_032286426.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AD12_RS15375;product=exoribonuclease II;protein_id=WP_032286426.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 57725 58852 . - . ID=gene-AD12_RS15370;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AD12_RS15370;old_locus_tag=AD12_1491 NZ_JJLK01000058.1 Protein Homology CDS 57725 58852 . - 0 ID=cds-WP_001356195.1;Parent=gene-AD12_RS15370;Dbxref=GenBank:WP_001356195.1;Name=WP_001356195.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309887.2;locus_tag=AD12_RS15370;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001356195.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 58997 59785 . - . ID=gene-AD12_RS15365;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AD12_RS15365;old_locus_tag=AD12_1492 NZ_JJLK01000058.1 Protein Homology CDS 58997 59785 . - 0 ID=cds-WP_000506490.1;Parent=gene-AD12_RS15365;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AD12_RS15365;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 60153 60506 . - . ID=gene-AD12_RS15360;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AD12_RS15360;old_locus_tag=AD12_1493 NZ_JJLK01000058.1 Protein Homology CDS 60153 60506 . - 0 ID=cds-WP_000968850.1;Parent=gene-AD12_RS15360;Dbxref=GenBank:WP_000968850.1;Name=WP_000968850.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707198.1;locus_tag=AD12_RS15360;product=DUF559 domain-containing protein;protein_id=WP_000968850.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 60574 61380 . - . ID=gene-AD12_RS15355;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AD12_RS15355;old_locus_tag=AD12_1494 NZ_JJLK01000058.1 Protein Homology CDS 60574 61380 . - 0 ID=cds-WP_000573412.1;Parent=gene-AD12_RS15355;Dbxref=GenBank:WP_000573412.1;Name=WP_000573412.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309894.1;locus_tag=AD12_RS15355;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573412.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 61382 62374 . - . ID=gene-AD12_RS15350;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AD12_RS15350;old_locus_tag=AD12_1495 NZ_JJLK01000058.1 Protein Homology CDS 61382 62374 . - 0 ID=cds-WP_001128858.1;Parent=gene-AD12_RS15350;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AD12_RS15350;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 62374 63264 . - . ID=gene-AD12_RS15345;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AD12_RS15345;old_locus_tag=AD12_1496 NZ_JJLK01000058.1 Protein Homology CDS 62374 63264 . - 0 ID=cds-WP_001146163.1;Parent=gene-AD12_RS15345;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AD12_RS15345;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 63251 64216 . - . ID=gene-AD12_RS15340;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AD12_RS15340;old_locus_tag=AD12_1497 NZ_JJLK01000058.1 Protein Homology CDS 63251 64216 . - 0 ID=cds-WP_000583277.1;Parent=gene-AD12_RS15340;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AD12_RS15340;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 64213 65856 . - . ID=gene-AD12_RS15335;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AD12_RS15335;old_locus_tag=AD12_1498 NZ_JJLK01000058.1 Protein Homology CDS 64213 65856 . - 0 ID=cds-WP_032286427.1;Parent=gene-AD12_RS15335;Dbxref=GenBank:WP_032286427.1;Name=WP_032286427.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AD12_RS15335;product=ABC transporter substrate-binding protein SapA;protein_id=WP_032286427.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 66169 66414 . - . ID=gene-AD12_RS15330;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AD12_RS15330;old_locus_tag=AD12_1499 NZ_JJLK01000058.1 Protein Homology CDS 66169 66414 . - 0 ID=cds-WP_001015110.1;Parent=gene-AD12_RS15330;Dbxref=GenBank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AD12_RS15330;product=YmjA family protein;protein_id=WP_001015110.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 66548 67933 . - . ID=gene-AD12_RS15325;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AD12_RS15325;old_locus_tag=AD12_1500 NZ_JJLK01000058.1 Protein Homology CDS 66548 67933 . - 0 ID=cds-WP_000996858.1;Parent=gene-AD12_RS15325;Dbxref=GenBank:WP_000996858.1;Name=WP_000996858.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707205.2;locus_tag=AD12_RS15325;product=putrescine/proton symporter PuuP;protein_id=WP_000996858.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 67923 68087 . - . ID=gene-AD12_RS28645;Name=AD12_RS28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28645 NZ_JJLK01000058.1 Protein Homology CDS 67923 68087 . - 0 ID=cds-WP_120795382.1;Parent=gene-AD12_RS28645;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AD12_RS28645;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 68236 69654 . - . ID=gene-AD12_RS15320;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AD12_RS15320;old_locus_tag=AD12_1501 NZ_JJLK01000058.1 Protein Homology CDS 68236 69654 . - 0 ID=cds-WP_001296746.1;Parent=gene-AD12_RS15320;Dbxref=GenBank:WP_001296746.1;Name=WP_001296746.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AD12_RS15320;product=glutamate-putrescine ligase;protein_id=WP_001296746.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 69866 70630 . + . ID=gene-AD12_RS15315;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AD12_RS15315;old_locus_tag=AD12_1502 NZ_JJLK01000058.1 Protein Homology CDS 69866 70630 . + 0 ID=cds-WP_001307158.1;Parent=gene-AD12_RS15315;Dbxref=GenBank:WP_001307158.1;Name=WP_001307158.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AD12_RS15315;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001307158.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 70657 71214 . + . ID=gene-AD12_RS15310;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AD12_RS15310;old_locus_tag=AD12_1503 NZ_JJLK01000058.1 Protein Homology CDS 70657 71214 . + 0 ID=cds-WP_001278727.1;Parent=gene-AD12_RS15310;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AD12_RS15310;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 71364 72851 . + . ID=gene-AD12_RS15305;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AD12_RS15305;old_locus_tag=AD12_1505 NZ_JJLK01000058.1 Protein Homology CDS 71364 72851 . + 0 ID=cds-WP_001009139.1;Parent=gene-AD12_RS15305;Dbxref=GenBank:WP_001009139.1;Name=WP_001009139.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AD12_RS15305;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009139.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 72853 74133 . + . ID=gene-AD12_RS15300;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AD12_RS15300;old_locus_tag=AD12_1506 NZ_JJLK01000058.1 Protein Homology CDS 72853 74133 . + 0 ID=cds-WP_000134849.1;Parent=gene-AD12_RS15300;Dbxref=GenBank:WP_000134849.1;Name=WP_000134849.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AD12_RS15300;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134849.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 74171 75436 . + . ID=gene-AD12_RS15295;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AD12_RS15295;old_locus_tag=AD12_1507 NZ_JJLK01000058.1 Protein Homology CDS 74171 75436 . + 0 ID=cds-WP_000069231.1;Parent=gene-AD12_RS15295;Dbxref=GenBank:WP_000069231.1;Name=WP_000069231.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309906.1;locus_tag=AD12_RS15295;product=4-aminobutyrate transaminase;protein_id=WP_000069231.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 75567 76544 . - . ID=gene-AD12_RS15290;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AD12_RS15290;old_locus_tag=AD12_1508 NZ_JJLK01000058.1 Protein Homology CDS 75567 76544 . - 0 ID=cds-WP_001324045.1;Parent=gene-AD12_RS15290;Dbxref=GenBank:WP_001324045.1;Name=WP_001324045.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AD12_RS15290;product=phage shock protein operon transcriptional activator;protein_id=WP_001324045.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 76711 77379 . + . ID=gene-AD12_RS15285;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AD12_RS15285;old_locus_tag=AD12_1509 NZ_JJLK01000058.1 Protein Homology CDS 76711 77379 . + 0 ID=cds-WP_000511018.1;Parent=gene-AD12_RS15285;Dbxref=GenBank:WP_000511018.1;Name=WP_000511018.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AD12_RS15285;product=phage shock protein PspA;protein_id=WP_000511018.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 77433 77657 . + . ID=gene-AD12_RS15280;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AD12_RS15280;old_locus_tag=AD12_1510 NZ_JJLK01000058.1 Protein Homology CDS 77433 77657 . + 0 ID=cds-WP_001274963.1;Parent=gene-AD12_RS15280;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AD12_RS15280;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 77657 78016 . + . ID=gene-AD12_RS15275;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AD12_RS15275;old_locus_tag=AD12_1511 NZ_JJLK01000058.1 Protein Homology CDS 77657 78016 . + 0 ID=cds-WP_000907387.1;Parent=gene-AD12_RS15275;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AD12_RS15275;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 78025 78246 . + . ID=gene-AD12_RS15270;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AD12_RS15270;old_locus_tag=AD12_1512 NZ_JJLK01000058.1 Protein Homology CDS 78025 78246 . + 0 ID=cds-WP_001295585.1;Parent=gene-AD12_RS15270;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AD12_RS15270;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 78321 78635 . + . ID=gene-AD12_RS15265;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AD12_RS15265;old_locus_tag=AD12_1513 NZ_JJLK01000058.1 Protein Homology CDS 78321 78635 . + 0 ID=cds-WP_000473109.1;Parent=gene-AD12_RS15265;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AD12_RS15265;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 78848 80527 . + . ID=gene-AD12_RS15260;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AD12_RS15260;old_locus_tag=AD12_1514 NZ_JJLK01000058.1 Protein Homology CDS 78848 80527 . + 0 ID=cds-WP_000810467.1;Parent=gene-AD12_RS15260;Dbxref=GenBank:WP_000810467.1;Name=WP_000810467.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AD12_RS15260;product=glucosylglycerate phosphorylase;protein_id=WP_000810467.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 80541 81833 . + . ID=gene-AD12_RS15255;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AD12_RS15255;old_locus_tag=AD12_1515 NZ_JJLK01000058.1 Protein Homology CDS 80541 81833 . + 0 ID=cds-WP_000597459.1;Parent=gene-AD12_RS15255;Dbxref=GenBank:WP_000597459.1;Name=WP_000597459.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AD12_RS15255;product=ABC transporter substrate-binding protein;protein_id=WP_000597459.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 81854 82735 . + . ID=gene-AD12_RS15250;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AD12_RS15250;old_locus_tag=AD12_1516 NZ_JJLK01000058.1 Protein Homology CDS 81854 82735 . + 0 ID=cds-WP_001080790.1;Parent=gene-AD12_RS15250;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AD12_RS15250;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 82722 83564 . + . ID=gene-AD12_RS15245;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AD12_RS15245;old_locus_tag=AD12_1517 NZ_JJLK01000058.1 Protein Homology CDS 82722 83564 . + 0 ID=cds-WP_000224659.1;Parent=gene-AD12_RS15245;Dbxref=GenBank:WP_000224659.1;Name=WP_000224659.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AD12_RS15245;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 83595 84647 . + . ID=gene-AD12_RS15240;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AD12_RS15240;old_locus_tag=AD12_1518 NZ_JJLK01000058.1 Protein Homology CDS 83595 84647 . + 0 ID=cds-WP_000737352.1;Parent=gene-AD12_RS15240;Dbxref=GenBank:WP_000737352.1;Name=WP_000737352.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AD12_RS15240;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737352.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 84665 85453 . + . ID=gene-AD12_RS15235;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AD12_RS15235;old_locus_tag=AD12_1519 NZ_JJLK01000058.1 Protein Homology CDS 84665 85453 . + 0 ID=cds-WP_032286428.1;Parent=gene-AD12_RS15235;Dbxref=GenBank:WP_032286428.1;Name=WP_032286428.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AD12_RS15235;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032286428.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 85463 86518 . + . ID=gene-AD12_RS15230;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AD12_RS15230;old_locus_tag=AD12_1520 NZ_JJLK01000058.1 Protein Homology CDS 85463 86518 . + 0 ID=cds-WP_001349887.1;Parent=gene-AD12_RS15230;Dbxref=GenBank:WP_001349887.1;Name=WP_001349887.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=AD12_RS15230;product=Gfo/Idh/MocA family protein;protein_id=WP_001349887.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 86515 88782 . + . ID=gene-AD12_RS15225;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AD12_RS15225;old_locus_tag=AD12_1521 NZ_JJLK01000058.1 Protein Homology CDS 86515 88782 . + 0 ID=cds-WP_000198012.1;Parent=gene-AD12_RS15225;Dbxref=GenBank:WP_000198012.1;Name=WP_000198012.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309922.1;locus_tag=AD12_RS15225;product=kojibiose phosphorylase;protein_id=WP_000198012.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 88779 89438 . + . ID=gene-AD12_RS15220;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AD12_RS15220;old_locus_tag=AD12_1522 NZ_JJLK01000058.1 Protein Homology CDS 88779 89438 . + 0 ID=cds-WP_032286429.1;Parent=gene-AD12_RS15220;Dbxref=GenBank:WP_032286429.1;Name=WP_032286429.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AD12_RS15220;product=beta-phosphoglucomutase;protein_id=WP_032286429.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 89452 90534 . + . ID=gene-AD12_RS15215;Name=AD12_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15215;old_locus_tag=AD12_1523 NZ_JJLK01000058.1 Protein Homology CDS 89452 90534 . + 0 ID=cds-WP_000057979.1;Parent=gene-AD12_RS15215;Dbxref=GenBank:WP_000057979.1;Name=WP_000057979.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AD12_RS15215;product=ABC transporter ATP-binding protein;protein_id=WP_000057979.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 90579 91484 . + . ID=gene-AD12_RS15210;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AD12_RS15210;old_locus_tag=AD12_1524 NZ_JJLK01000058.1 Protein Homology CDS 90579 91484 . + 0 ID=cds-WP_000735236.1;Parent=gene-AD12_RS15210;Dbxref=GenBank:WP_000735236.1;Name=WP_000735236.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AD12_RS15210;product=monomeric porin OmpG;protein_id=WP_000735236.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 91595 92593 . - . ID=gene-AD12_RS15205;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AD12_RS15205;old_locus_tag=AD12_1525 NZ_JJLK01000058.1 Protein Homology CDS 91595 92593 . - 0 ID=cds-WP_000075377.1;Parent=gene-AD12_RS15205;Dbxref=GenBank:WP_000075377.1;Name=WP_000075377.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AD12_RS15205;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075377.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 92748 94145 . + . ID=gene-AD12_RS15200;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AD12_RS15200;old_locus_tag=AD12_1526 NZ_JJLK01000058.1 Protein Homology CDS 92748 94145 . + 0 ID=cds-WP_032286430.1;Parent=gene-AD12_RS15200;Dbxref=GenBank:WP_032286430.1;Name=WP_032286430.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AD12_RS15200;product=YcjX family protein;protein_id=WP_032286430.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 94142 95203 . + . ID=gene-AD12_RS15195;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AD12_RS15195;old_locus_tag=AD12_1527 NZ_JJLK01000058.1 Protein Homology CDS 94142 95203 . + 0 ID=cds-WP_032286431.1;Parent=gene-AD12_RS15195;Dbxref=GenBank:WP_032286431.1;Name=WP_032286431.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AD12_RS15195;product=YcjF family protein;protein_id=WP_032286431.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 95351 96892 . + . ID=gene-AD12_RS15190;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AD12_RS15190;old_locus_tag=AD12_1528 NZ_JJLK01000058.1 Protein Homology CDS 95351 96892 . + 0 ID=cds-WP_001300658.1;Parent=gene-AD12_RS15190;Dbxref=GenBank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AD12_RS15190;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 96936 97442 . - . ID=gene-AD12_RS15185;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AD12_RS15185;old_locus_tag=AD12_1529 NZ_JJLK01000058.1 Protein Homology CDS 96936 97442 . - 0 ID=cds-WP_000084387.1;Parent=gene-AD12_RS15185;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AD12_RS15185;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 97561 98526 . + . ID=gene-AD12_RS15180;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AD12_RS15180;old_locus_tag=AD12_1530 NZ_JJLK01000058.1 Protein Homology CDS 97561 98526 . + 0 ID=cds-WP_001324049.1;Parent=gene-AD12_RS15180;Dbxref=GenBank:WP_001324049.1;Name=WP_001324049.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707230.2;locus_tag=AD12_RS15180;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001324049.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 98501 99229 . - . ID=gene-AD12_RS15175;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AD12_RS15175;old_locus_tag=AD12_1531 NZ_JJLK01000058.1 Protein Homology CDS 98501 99229 . - 0 ID=cds-WP_001295589.1;Parent=gene-AD12_RS15175;Dbxref=GenBank:WP_001295589.1;Name=WP_001295589.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AD12_RS15175;product=murein tripeptide amidase MpaA;protein_id=WP_001295589.1;transl_table=11 NZ_JJLK01000058.1 RefSeq pseudogene 99357 99494 . - . ID=gene-AD12_RS28650;Name=AD12_RS28650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28650;old_locus_tag=AD12_1532;partial=true;pseudo=true;start_range=.,99357 NZ_JJLK01000058.1 Protein Homology CDS 99357 99494 . - 0 ID=cds-AD12_RS28650;Parent=gene-AD12_RS28650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AD12_RS28650;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,99357;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 99565 100485 . - . ID=gene-AD12_RS15165;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AD12_RS15165;old_locus_tag=AD12_1533 NZ_JJLK01000058.1 Protein Homology CDS 99565 100485 . - 0 ID=cds-WP_001345592.1;Parent=gene-AD12_RS15165;Dbxref=GenBank:WP_001345592.1;Name=WP_001345592.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AD12_RS15165;product=alpha/beta hydrolase;protein_id=WP_001345592.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 100623 101522 . + . ID=gene-AD12_RS15160;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AD12_RS15160;old_locus_tag=AD12_1534 NZ_JJLK01000058.1 Protein Homology CDS 100623 101522 . + 0 ID=cds-WP_000817693.1;Parent=gene-AD12_RS15160;Dbxref=GenBank:WP_000817693.1;Name=WP_000817693.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=AD12_RS15160;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817693.1;transl_table=11 NZ_JJLK01000058.1 RefSeq pseudogene 101620 101712 . + . ID=gene-AD12_RS29885;Name=AD12_RS29885;end_range=101712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29885;old_locus_tag=AD12_1535;partial=true;pseudo=true;start_range=.,101620 NZ_JJLK01000058.1 Protein Homology CDS 101620 101712 . + 0 ID=cds-AD12_RS29885;Parent=gene-AD12_RS29885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=101712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170112.1;locus_tag=AD12_RS29885;partial=true;product=epoxyqueuosine reductase QueH;pseudo=true;start_range=.,101620;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 101859 103472 . + . ID=gene-AD12_RS15150;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AD12_RS15150;old_locus_tag=AD12_1536 NZ_JJLK01000058.1 Protein Homology CDS 101859 103472 . + 0 ID=cds-WP_000683020.1;Parent=gene-AD12_RS15150;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AD12_RS15150;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 103523 104554 . - . ID=gene-AD12_RS15145;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AD12_RS15145;old_locus_tag=AD12_1537 NZ_JJLK01000058.1 Protein Homology CDS 103523 104554 . - 0 ID=cds-WP_000559900.1;Parent=gene-AD12_RS15145;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AD12_RS15145;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 104798 105055 . + . ID=gene-AD12_RS15140;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AD12_RS15140;old_locus_tag=AD12_1538 NZ_JJLK01000058.1 Protein Homology CDS 104798 105055 . + 0 ID=cds-WP_000605090.1;Parent=gene-AD12_RS15140;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AD12_RS15140;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 105105 106055 . - . ID=gene-AD12_RS15135;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AD12_RS15135;old_locus_tag=AD12_1539 NZ_JJLK01000058.1 Protein Homology CDS 105105 106055 . - 0 ID=cds-WP_001262123.1;Parent=gene-AD12_RS15135;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AD12_RS15135;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 106207 106959 . - . ID=gene-AD12_RS15130;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AD12_RS15130;old_locus_tag=AD12_1540 NZ_JJLK01000058.1 Protein Homology CDS 106207 106959 . - 0 ID=cds-WP_000611911.1;Parent=gene-AD12_RS15130;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AD12_RS15130;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 107154 107669 . - . ID=gene-AD12_RS15125;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AD12_RS15125;old_locus_tag=AD12_1541 NZ_JJLK01000058.1 Protein Homology CDS 107154 107669 . - 0 ID=cds-WP_000945005.1;Parent=gene-AD12_RS15125;Dbxref=GenBank:WP_000945005.1;Name=WP_000945005.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AD12_RS15125;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945005.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 107680 109206 . - . ID=gene-AD12_RS15120;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AD12_RS15120;old_locus_tag=AD12_1542 NZ_JJLK01000058.1 Protein Homology CDS 107680 109206 . - 0 ID=cds-WP_000062967.1;Parent=gene-AD12_RS15120;Dbxref=GenBank:WP_000062967.1;Name=WP_000062967.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AD12_RS15120;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062967.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 109243 110688 . - . ID=gene-AD12_RS15115;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AD12_RS15115;old_locus_tag=AD12_1543 NZ_JJLK01000058.1 Protein Homology CDS 109243 110688 . - 0 ID=cds-WP_001156471.1;Parent=gene-AD12_RS15115;Dbxref=GenBank:WP_001156471.1;Name=WP_001156471.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AD12_RS15115;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156471.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 110688 111998 . - . ID=gene-AD12_RS15110;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AD12_RS15110;old_locus_tag=AD12_1544 NZ_JJLK01000058.1 Protein Homology CDS 110688 111998 . - 0 ID=cds-WP_000444949.1;Parent=gene-AD12_RS15110;Dbxref=GenBank:WP_000444949.1;Name=WP_000444949.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AD12_RS15110;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_000444949.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 112174 113082 . + . ID=gene-AD12_RS15105;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AD12_RS15105;old_locus_tag=AD12_1545 NZ_JJLK01000058.1 Protein Homology CDS 112174 113082 . + 0 ID=cds-WP_000885467.1;Parent=gene-AD12_RS15105;Dbxref=GenBank:WP_000885467.1;Name=WP_000885467.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AD12_RS15105;product=LysR family transcriptional regulator;protein_id=WP_000885467.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 113412 113975 . + . ID=gene-AD12_RS15100;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AD12_RS15100;old_locus_tag=AD12_1546 NZ_JJLK01000058.1 Protein Homology CDS 113412 113975 . + 0 ID=cds-WP_001046821.1;Parent=gene-AD12_RS15100;Dbxref=GenBank:WP_001046821.1;Name=WP_001046821.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309951.1;locus_tag=AD12_RS15100;product=DNA endonuclease SmrA;protein_id=WP_001046821.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 113996 115228 . - . ID=gene-AD12_RS15095;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AD12_RS15095;old_locus_tag=AD12_1547 NZ_JJLK01000058.1 Protein Homology CDS 113996 115228 . - 0 ID=cds-WP_000628065.1;Parent=gene-AD12_RS15095;Dbxref=GenBank:WP_000628065.1;Name=WP_000628065.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309952.2;locus_tag=AD12_RS15095;product=diguanylate cyclase DgcM;protein_id=WP_000628065.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 115422 115469 . + . ID=gene-AD12_RS29250;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AD12_RS29250 NZ_JJLK01000058.1 Protein Homology CDS 115422 115469 . + 0 ID=cds-WP_211180494.1;Parent=gene-AD12_RS29250;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AD12_RS29250;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 115483 116466 . + . ID=gene-AD12_RS15090;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AD12_RS15090;old_locus_tag=AD12_1548 NZ_JJLK01000058.1 Protein Homology CDS 115483 116466 . + 0 ID=cds-WP_000387395.1;Parent=gene-AD12_RS15090;Dbxref=GenBank:WP_000387395.1;Name=WP_000387395.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AD12_RS15090;product=zinc transporter ZntB;protein_id=WP_000387395.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 116741 116914 . + . ID=gene-AD12_RS29030;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AD12_RS29030 NZ_JJLK01000058.1 Protein Homology CDS 116741 116914 . + 0 ID=cds-WP_001296046.1;Parent=gene-AD12_RS29030;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AD12_RS29030;product=proline-rich small protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 116944 118317 . + . ID=gene-AD12_RS15085;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AD12_RS15085;old_locus_tag=AD12_1549 NZ_JJLK01000058.1 Protein Homology CDS 116944 118317 . + 0 ID=cds-WP_000123718.1;Parent=gene-AD12_RS15085;Dbxref=GenBank:WP_000123718.1;Name=WP_000123718.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=AD12_RS15085;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123718.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 118446 119381 . - . ID=gene-AD12_RS15080;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AD12_RS15080;old_locus_tag=AD12_1550 NZ_JJLK01000058.1 Protein Homology CDS 118446 119381 . - 0 ID=cds-WP_001157407.1;Parent=gene-AD12_RS15080;Dbxref=GenBank:WP_001157407.1;Name=WP_001157407.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=AD12_RS15080;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001157407.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 119433 120668 . - . ID=gene-AD12_RS26515;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;locus_tag=AD12_RS26515 NZ_JJLK01000058.1 Protein Homology CDS 119433 120668 . - 0 ID=cds-WP_000040852.1;Parent=gene-AD12_RS26515;Dbxref=GenBank:WP_000040852.1;Name=WP_000040852.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intR;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415861.1;locus_tag=AD12_RS26515;product=tyrosine-type recombinase/integrase;protein_id=WP_000040852.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 120670 120885 . - . ID=gene-AD12_RS15075;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=AD12_RS15075;old_locus_tag=AD12_1552 NZ_JJLK01000058.1 Protein Homology CDS 120670 120885 . - 0 ID=cds-WP_000079604.1;Parent=gene-AD12_RS15075;Dbxref=GenBank:WP_000079604.1;Name=WP_000079604.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309957.2;locus_tag=AD12_RS15075;product=excisionase XisR;protein_id=WP_000079604.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 120964 121173 . - . ID=gene-AD12_RS0123740;Name=rcbA;gbkey=Gene;gene=rcbA;gene_biotype=protein_coding;locus_tag=AD12_RS0123740 NZ_JJLK01000058.1 Protein Homology CDS 120964 121173 . - 0 ID=cds-WP_000276809.1;Parent=gene-AD12_RS0123740;Dbxref=GenBank:WP_000276809.1;Name=WP_000276809.1;gbkey=CDS;gene=rcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415863.1;locus_tag=AD12_RS0123740;product=double-strand break reduction protein RcbA;protein_id=WP_000276809.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 121166 121360 . - . ID=gene-AD12_RS0123745;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=AD12_RS0123745 NZ_JJLK01000058.1 Protein Homology CDS 121166 121360 . - 0 ID=cds-WP_001317028.1;Parent=gene-AD12_RS0123745;Dbxref=GenBank:WP_001317028.1;Name=WP_001317028.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=AD12_RS0123745;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_001317028.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 121417 122226 . - . ID=gene-AD12_RS15070;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=AD12_RS15070;old_locus_tag=AD12_1554 NZ_JJLK01000058.1 Protein Homology CDS 121417 122226 . - 0 ID=cds-WP_000166319.1;Parent=gene-AD12_RS15070;Dbxref=GenBank:WP_000166319.1;Name=WP_000166319.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=AD12_RS15070;product=recombination protein RecT;protein_id=WP_000166319.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 122219 124819 . - . ID=gene-AD12_RS15065;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=AD12_RS15065;old_locus_tag=AD12_1555 NZ_JJLK01000058.1 Protein Homology CDS 122219 124819 . - 0 ID=cds-WP_032286432.1;Parent=gene-AD12_RS15065;Dbxref=GenBank:WP_032286432.1;Name=WP_032286432.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415866.1;locus_tag=AD12_RS15065;product=exodeoxyribonuclease VIII;protein_id=WP_032286432.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 124921 125196 . - . ID=gene-AD12_RS15060;Name=AD12_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15060;old_locus_tag=AD12_1556 NZ_JJLK01000058.1 Protein Homology CDS 124921 125196 . - 0 ID=cds-WP_001774422.1;Parent=gene-AD12_RS15060;Dbxref=GenBank:WP_001774422.1;Name=WP_001774422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415867.1;locus_tag=AD12_RS15060;product=phage protein;protein_id=WP_001774422.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 125271 125441 . - . ID=gene-AD12_RS15055;Name=ydaE;gbkey=Gene;gene=ydaE;gene_biotype=protein_coding;locus_tag=AD12_RS15055;old_locus_tag=AD12_1557 NZ_JJLK01000058.1 Protein Homology CDS 125271 125441 . - 0 ID=cds-WP_001352098.1;Parent=gene-AD12_RS15055;Dbxref=GenBank:WP_001352098.1;Name=WP_001352098.1;gbkey=CDS;gene=ydaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588451.1;locus_tag=AD12_RS15055;product=YdaE family protein;protein_id=WP_001352098.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 125441 125662 . - . ID=gene-AD12_RS15050;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=AD12_RS15050;old_locus_tag=AD12_1558 NZ_JJLK01000058.1 Protein Homology CDS 125441 125662 . - 0 ID=cds-WP_000560223.1;Parent=gene-AD12_RS15050;Dbxref=GenBank:WP_000560223.1;Name=WP_000560223.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309963.2;locus_tag=AD12_RS15050;product=killing protein KilR;protein_id=WP_000560223.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 126104 126592 . + . ID=gene-AD12_RS0123750;Name=sieB;gbkey=Gene;gene=sieB;gene_biotype=protein_coding;locus_tag=AD12_RS0123750 NZ_JJLK01000058.1 Protein Homology CDS 126104 126592 . + 0 ID=cds-WP_001312793.1;Parent=gene-AD12_RS0123750;Dbxref=GenBank:WP_001312793.1;Name=WP_001312793.1;gbkey=CDS;gene=sieB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415870.4;locus_tag=AD12_RS0123750;product=superinfection exclusion B family protein;protein_id=WP_001312793.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 126589 126744 . - . ID=gene-AD12_RS25635;Name=ydaF;gbkey=Gene;gene=ydaF;gene_biotype=protein_coding;locus_tag=AD12_RS25635;old_locus_tag=AD12_1560 NZ_JJLK01000058.1 Protein Homology CDS 126589 126744 . - 0 ID=cds-WP_001169151.1;Parent=gene-AD12_RS25635;Dbxref=GenBank:WP_001169151.1;Name=WP_001169151.1;gbkey=CDS;gene=ydaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309965.1;locus_tag=AD12_RS25635;product=YdaF family protein;protein_id=WP_001169151.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 126755 126889 . - . ID=gene-AD12_RS29685;Name=AD12_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29685;old_locus_tag=AD12_1561 NZ_JJLK01000058.1 Protein Homology CDS 126755 126889 . - 0 ID=cds-WP_000233809.1;Parent=gene-AD12_RS29685;Dbxref=GenBank:WP_000233809.1;Name=WP_000233809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233806.1;locus_tag=AD12_RS29685;product=phage protein;protein_id=WP_000233809.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 127197 127673 . - . ID=gene-AD12_RS0123755;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;locus_tag=AD12_RS0123755 NZ_JJLK01000058.1 Protein Homology CDS 127197 127673 . - 0 ID=cds-WP_000948458.1;Parent=gene-AD12_RS0123755;Dbxref=GenBank:WP_000948458.1;Name=WP_000948458.1;Ontology_term=GO:2000143,GO:0001217;gbkey=CDS;gene=racR;go_function=DNA-binding transcription repressor activity|0001217||IEA;go_process=negative regulation of DNA-templated transcription initiation|2000143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415874.1;locus_tag=AD12_RS0123755;product=DNA-binding transcriptional repressor RacR;protein_id=WP_000948458.1;transl_table=11 NZ_JJLK01000058.1 RefSeq pseudogene 127797 128051 . + . ID=gene-AD12_RS0123760;Name=ydaS;end_range=128051,.;gbkey=Gene;gene=ydaS;gene_biotype=pseudogene;locus_tag=AD12_RS0123760;partial=true;pseudo=true NZ_JJLK01000058.1 Protein Homology CDS 127797 128051 . + 0 ID=cds-AD12_RS0123760;Parent=gene-AD12_RS0123760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=128051,.;gbkey=CDS;gene=ydaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309534.1;locus_tag=AD12_RS0123760;partial=true;product=toxin YdaS;pseudo=true;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 128116 128538 . + . ID=gene-AD12_RS15045;Name=ydaT;gbkey=Gene;gene=ydaT;gene_biotype=protein_coding;locus_tag=AD12_RS15045;old_locus_tag=AD12_1562 NZ_JJLK01000058.1 Protein Homology CDS 128116 128538 . + 0 ID=cds-WP_000693797.1;Parent=gene-AD12_RS15045;Dbxref=GenBank:WP_000693797.1;Name=WP_000693797.1;gbkey=CDS;gene=ydaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415876.1;locus_tag=AD12_RS15045;product=toxin YdaT family protein;protein_id=WP_000693797.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 128551 129408 . + . ID=gene-AD12_RS15040;Name=ydaU;gbkey=Gene;gene=ydaU;gene_biotype=protein_coding;locus_tag=AD12_RS15040;old_locus_tag=AD12_1563 NZ_JJLK01000058.1 Protein Homology CDS 128551 129408 . + 0 ID=cds-WP_001774423.1;Parent=gene-AD12_RS15040;Dbxref=GenBank:WP_001774423.1;Name=WP_001774423.1;gbkey=CDS;gene=ydaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415877.1;locus_tag=AD12_RS15040;product=YdaU family protein;protein_id=WP_001774423.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 129415 130161 . + . ID=gene-AD12_RS15035;Name=ydaV;gbkey=Gene;gene=ydaV;gene_biotype=protein_coding;locus_tag=AD12_RS15035;old_locus_tag=AD12_1564 NZ_JJLK01000058.1 Protein Homology CDS 129415 130161 . + 0 ID=cds-WP_001702662.1;Parent=gene-AD12_RS15035;Dbxref=GenBank:WP_001702662.1;Name=WP_001702662.1;gbkey=CDS;gene=ydaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415878.1;locus_tag=AD12_RS15035;product=ATP-binding protein;protein_id=WP_001702662.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 130184 130945 . + . ID=gene-AD12_RS15030;Name=AD12_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15030;old_locus_tag=AD12_1565 NZ_JJLK01000058.1 Protein Homology CDS 130184 130945 . + 0 ID=cds-WP_001741626.1;Parent=gene-AD12_RS15030;Dbxref=GenBank:WP_001741626.1;Name=WP_001741626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AD12_RS15030;product=DUF1627 domain-containing protein;protein_id=WP_001741626.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 130961 131383 . + . ID=gene-AD12_RS15025;Name=AD12_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15025;old_locus_tag=AD12_1566 NZ_JJLK01000058.1 Protein Homology CDS 130961 131383 . + 0 ID=cds-WP_032286433.1;Parent=gene-AD12_RS15025;Dbxref=GenBank:WP_032286433.1;Name=WP_032286433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309975.1;locus_tag=AD12_RS15025;product=DUF977 family protein;protein_id=WP_032286433.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 131545 132048 . + . ID=gene-AD12_RS28660;Name=AD12_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28660;old_locus_tag=AD12_1567 NZ_JJLK01000058.1 Protein Homology CDS 131545 132048 . + 0 ID=cds-WP_032170691.1;Parent=gene-AD12_RS28660;Dbxref=GenBank:WP_032170691.1;Name=WP_032170691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405093.1;locus_tag=AD12_RS28660;product=hypothetical protein;protein_id=WP_032170691.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 132169 132942 . - . ID=gene-AD12_RS15015;Name=AD12_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15015;old_locus_tag=AD12_1568 NZ_JJLK01000058.1 Protein Homology CDS 132169 132942 . - 0 ID=cds-WP_000200358.1;Parent=gene-AD12_RS15015;Dbxref=GenBank:WP_000200358.1;Name=WP_000200358.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158362.1;locus_tag=AD12_RS15015;product=KilA-N domain-containing protein;protein_id=WP_000200358.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 133465 133590 . + . ID=gene-AD12_RS0123765;Name=AD12_RS0123765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123765 NZ_JJLK01000058.1 Protein Homology CDS 133465 133590 . + 0 ID=cds-WP_001445775.1;Parent=gene-AD12_RS0123765;Dbxref=GenBank:WP_001445775.1;Name=WP_001445775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AD12_RS0123765;product=Hok/Gef family protein;protein_id=WP_001445775.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 133673 134014 . - . ID=gene-AD12_RS0123770;Name=AD12_RS0123770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123770 NZ_JJLK01000058.1 Protein Homology CDS 133673 134014 . - 0 ID=cds-WP_001445776.1;Parent=gene-AD12_RS0123770;Dbxref=GenBank:WP_001445776.1;Name=WP_001445776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001445776.1;locus_tag=AD12_RS0123770;product=DUF1971 domain-containing protein;protein_id=WP_001445776.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 134882 135481 . + . ID=gene-AD12_RS15010;Name=AD12_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15010;old_locus_tag=AD12_1571 NZ_JJLK01000058.1 Protein Homology CDS 134882 135481 . + 0 ID=cds-WP_032170692.1;Parent=gene-AD12_RS15010;Dbxref=GenBank:WP_032170692.1;Name=WP_032170692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=AD12_RS15010;product=DUF1367 family protein;protein_id=WP_032170692.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 135481 135771 . + . ID=gene-AD12_RS15005;Name=AD12_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15005;old_locus_tag=AD12_1572 NZ_JJLK01000058.1 Protein Homology CDS 135481 135771 . + 0 ID=cds-WP_001551052.1;Parent=gene-AD12_RS15005;Dbxref=GenBank:WP_001551052.1;Name=WP_001551052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707251.1;locus_tag=AD12_RS15005;product=DUF1364 domain-containing protein;protein_id=WP_001551052.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 135768 136310 . + . ID=gene-AD12_RS15000;Name=AD12_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS15000;old_locus_tag=AD12_1573 NZ_JJLK01000058.1 Protein Homology CDS 135768 136310 . + 0 ID=cds-WP_000640136.1;Parent=gene-AD12_RS15000;Dbxref=GenBank:WP_000640136.1;Name=WP_000640136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001502553.1;locus_tag=AD12_RS15000;product=DUF1133 family protein;protein_id=WP_000640136.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 136676 136751 . + . ID=gene-AD12_RS14995;Name=AD12_RS14995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS14995;old_locus_tag=AD12_1574 NZ_JJLK01000058.1 tRNAscan-SE tRNA 136676 136751 . + . ID=rna-AD12_RS14995;Parent=gene-AD12_RS14995;anticodon=(pos:136709..136711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS14995;product=tRNA-Thr NZ_JJLK01000058.1 tRNAscan-SE exon 136676 136751 . + . ID=exon-AD12_RS14995-1;Parent=rna-AD12_RS14995;anticodon=(pos:136709..136711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS14995;product=tRNA-Thr NZ_JJLK01000058.1 RefSeq gene 136755 136829 . + . ID=gene-AD12_RS14990;Name=AD12_RS14990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS14990;old_locus_tag=AD12_1575 NZ_JJLK01000058.1 tRNAscan-SE tRNA 136755 136829 . + . ID=rna-AD12_RS14990;Parent=gene-AD12_RS14990;anticodon=(pos:136788..136790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS14990;product=tRNA-Gly NZ_JJLK01000058.1 tRNAscan-SE exon 136755 136829 . + . ID=exon-AD12_RS14990-1;Parent=rna-AD12_RS14990;anticodon=(pos:136788..136790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS14990;product=tRNA-Gly NZ_JJLK01000058.1 RefSeq gene 137122 137337 . + . ID=gene-AD12_RS14985;Name=AD12_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS14985;old_locus_tag=AD12_1577 NZ_JJLK01000058.1 Protein Homology CDS 137122 137337 . + 0 ID=cds-WP_000839572.1;Parent=gene-AD12_RS14985;Dbxref=GenBank:WP_000839572.1;Name=WP_000839572.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707874.1;locus_tag=AD12_RS14985;product=class II holin family protein;protein_id=WP_000839572.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 137342 137692 . + . ID=gene-AD12_RS14980;Name=AD12_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS14980;old_locus_tag=AD12_1578 NZ_JJLK01000058.1 Protein Homology CDS 137342 137692 . + 0 ID=cds-WP_000193264.1;Parent=gene-AD12_RS14980;Dbxref=GenBank:WP_000193264.1;Name=WP_000193264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193290.1;locus_tag=AD12_RS14980;product=YdfR family protein;protein_id=WP_000193264.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 137756 138289 . + . ID=gene-AD12_RS14975;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AD12_RS14975;old_locus_tag=AD12_1579 NZ_JJLK01000058.1 Protein Homology CDS 137756 138289 . + 0 ID=cds-WP_000992101.1;Parent=gene-AD12_RS14975;Dbxref=GenBank:WP_000992101.1;Name=WP_000992101.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AD12_RS14975;product=lysozyme;protein_id=WP_000992101.1;transl_table=11 NZ_JJLK01000058.1 RefSeq gene 138286 138675 . + . ID=gene-AD12_RS29485;Name=AD12_RS29485;end_range=138675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29485;old_locus_tag=AD12_1580;partial=true NZ_JJLK01000058.1 Protein Homology CDS 138286 138675 . + 0 ID=cds-WP_032286434.1;Parent=gene-AD12_RS29485;Dbxref=GenBank:WP_032286434.1;Name=WP_032286434.1;end_range=138675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415088.1;locus_tag=AD12_RS29485;partial=true;product=lysis protein;protein_id=WP_032286434.1;transl_table=11 ##sequence-region NZ_JJLK01000059.1 1 84133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000059.1 RefSeq region 1 84133 . + . ID=NZ_JJLK01000059.1:1..84133;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000059.1 RefSeq gene 27 1160 . - . ID=gene-AD12_RS14965;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AD12_RS14965;old_locus_tag=AD12_1581 NZ_JJLK01000059.1 Protein Homology CDS 27 1160 . - 0 ID=cds-WP_000837924.1-2;Parent=gene-AD12_RS14965;Dbxref=GenBank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AD12_RS14965;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 1528 5052 . - . ID=gene-AD12_RS14960;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AD12_RS14960;old_locus_tag=AD12_1582 NZ_JJLK01000059.1 Protein Homology CDS 1528 5052 . - 0 ID=cds-WP_000628148.1;Parent=gene-AD12_RS14960;Dbxref=GenBank:WP_000628148.1;Name=WP_000628148.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310027.1;locus_tag=AD12_RS14960;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_000628148.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 5326 5592 . + . ID=gene-AD12_RS0123780;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AD12_RS0123780 NZ_JJLK01000059.1 Protein Homology CDS 5326 5592 . + 0 ID=cds-WP_001295715.1;Parent=gene-AD12_RS0123780;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AD12_RS0123780;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 5589 6011 . - . ID=gene-AD12_RS14955;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AD12_RS14955;old_locus_tag=AD12_1585 NZ_JJLK01000059.1 Protein Homology CDS 5589 6011 . - 0 ID=cds-WP_001298828.1;Parent=gene-AD12_RS14955;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AD12_RS14955;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 6122 7111 . - . ID=gene-AD12_RS14950;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AD12_RS14950;old_locus_tag=AD12_1586 NZ_JJLK01000059.1 Protein Homology CDS 6122 7111 . - 0 ID=cds-WP_000762229.1;Parent=gene-AD12_RS14950;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AD12_RS14950;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 7319 9958 . + . ID=gene-AD12_RS14945;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AD12_RS14945;old_locus_tag=AD12_1587 NZ_JJLK01000059.1 Protein Homology CDS 7319 9958 . + 0 ID=cds-WP_000900996.1;Parent=gene-AD12_RS14945;Dbxref=GenBank:WP_000900996.1;Name=WP_000900996.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AD12_RS14945;product=YdbH family protein;protein_id=WP_000900996.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 9955 10140 . + . ID=gene-AD12_RS14940;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AD12_RS14940;old_locus_tag=AD12_1588 NZ_JJLK01000059.1 Protein Homology CDS 9955 10140 . + 0 ID=cds-WP_000698141.1;Parent=gene-AD12_RS14940;Dbxref=GenBank:WP_000698141.1;Name=WP_000698141.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AD12_RS14940;product=YnbE family lipoprotein;protein_id=WP_000698141.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 10145 10474 . + . ID=gene-AD12_RS14935;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;locus_tag=AD12_RS14935;old_locus_tag=AD12_1589 NZ_JJLK01000059.1 Protein Homology CDS 10145 10474 . + 0 ID=cds-WP_001325798.1;Parent=gene-AD12_RS14935;Dbxref=GenBank:WP_001325798.1;Name=WP_001325798.1;gbkey=CDS;gene=ydbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707676.2;locus_tag=AD12_RS14935;product=YdbL family protein;protein_id=WP_001325798.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 10646 11551 . - . ID=gene-AD12_RS14930;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=AD12_RS14930;old_locus_tag=AD12_1590 NZ_JJLK01000059.1 Protein Homology CDS 10646 11551 . - 0 ID=cds-WP_001067491.1;Parent=gene-AD12_RS14930;Dbxref=GenBank:WP_001067491.1;Name=WP_001067491.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AD12_RS14930;product=transcriptional regulator FeaR;protein_id=WP_001067491.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 11787 13286 . + . ID=gene-AD12_RS14925;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=maoB,padA;locus_tag=AD12_RS14925;old_locus_tag=AD12_1591 NZ_JJLK01000059.1 Protein Homology CDS 11787 13286 . + 0 ID=cds-WP_000138615.1;Parent=gene-AD12_RS14925;Dbxref=GenBank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;gene=feaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=AD12_RS14925;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 13344 15617 . - . ID=gene-AD12_RS14920;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=AD12_RS14920;old_locus_tag=AD12_1592 NZ_JJLK01000059.1 Protein Homology CDS 13344 15617 . - 0 ID=cds-WP_000535472.1;Parent=gene-AD12_RS14920;Dbxref=GenBank:WP_000535472.1;Name=WP_000535472.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary methylamine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=AD12_RS14920;product=primary-amine oxidase;protein_id=WP_000535472.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 15865 17910 . - . ID=gene-AD12_RS14915;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=AD12_RS14915;old_locus_tag=AD12_1594 NZ_JJLK01000059.1 Protein Homology CDS 15865 17910 . - 0 ID=cds-WP_032286435.1;Parent=gene-AD12_RS14915;Dbxref=GenBank:WP_032286435.1;Name=WP_032286435.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=AD12_RS14915;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_032286435.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 18195 19124 . + . ID=gene-AD12_RS14910;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=AD12_RS14910;old_locus_tag=AD12_1595 NZ_JJLK01000059.1 Protein Homology CDS 18195 19124 . + 0 ID=cds-WP_000191073.1;Parent=gene-AD12_RS14910;Dbxref=GenBank:WP_000191073.1;Name=WP_000191073.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=AD12_RS14910;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_000191073.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 19136 19423 . + . ID=gene-AD12_RS14905;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AD12_RS14905;old_locus_tag=AD12_1596 NZ_JJLK01000059.1 Protein Homology CDS 19136 19423 . + 0 ID=cds-WP_000073393.1;Parent=gene-AD12_RS14905;Dbxref=GenBank:WP_000073393.1;Name=WP_000073393.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=AD12_RS14905;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_000073393.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 19432 20178 . + . ID=gene-AD12_RS14900;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AD12_RS14900;old_locus_tag=AD12_1597 NZ_JJLK01000059.1 Protein Homology CDS 19432 20178 . + 0 ID=cds-WP_001072837.1;Parent=gene-AD12_RS14900;Dbxref=GenBank:WP_001072837.1;Name=WP_001072837.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=AD12_RS14900;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_001072837.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 20193 20690 . + . ID=gene-AD12_RS14895;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=AD12_RS14895;old_locus_tag=AD12_1598 NZ_JJLK01000059.1 Protein Homology CDS 20193 20690 . + 0 ID=cds-WP_001189194.1;Parent=gene-AD12_RS14895;Dbxref=GenBank:WP_001189194.1;Name=WP_001189194.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=AD12_RS14895;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_001189194.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 20698 21768 . + . ID=gene-AD12_RS14890;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=AD12_RS14890;old_locus_tag=AD12_1599 NZ_JJLK01000059.1 Protein Homology CDS 20698 21768 . + 0 ID=cds-WP_032286436.1;Parent=gene-AD12_RS14890;Dbxref=GenBank:WP_032286436.1;Name=WP_032286436.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=AD12_RS14890;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_032286436.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 21765 22532 . + . ID=gene-AD12_RS14885;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=AD12_RS14885;old_locus_tag=AD12_1600 NZ_JJLK01000059.1 Protein Homology CDS 21765 22532 . + 0 ID=cds-WP_001292353.1;Parent=gene-AD12_RS14885;Dbxref=GenBank:WP_001292353.1;Name=WP_001292353.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=AD12_RS14885;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_001292353.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 22532 23320 . + . ID=gene-AD12_RS14880;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=AD12_RS14880;old_locus_tag=AD12_1601 NZ_JJLK01000059.1 Protein Homology CDS 22532 23320 . + 0 ID=cds-WP_000969777.1;Parent=gene-AD12_RS14880;Dbxref=GenBank:WP_000969777.1;Name=WP_000969777.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=AD12_RS14880;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_000969777.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 23322 24749 . + . ID=gene-AD12_RS14875;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;locus_tag=AD12_RS14875;old_locus_tag=AD12_1602 NZ_JJLK01000059.1 Protein Homology CDS 23322 24749 . + 0 ID=cds-WP_000973371.1;Parent=gene-AD12_RS14875;Dbxref=GenBank:WP_000973371.1;Name=WP_000973371.1;Ontology_term=GO:0010124,GO:0008691;gbkey=CDS;gene=paaH;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415913.1;locus_tag=AD12_RS14875;product=3-hydroxyacyl-CoA dehydrogenase PaaH;protein_id=WP_000973371.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 24739 25161 . + . ID=gene-AD12_RS14870;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=AD12_RS14870;old_locus_tag=AD12_1603 NZ_JJLK01000059.1 Protein Homology CDS 24739 25161 . + 0 ID=cds-WP_000018413.1;Parent=gene-AD12_RS14870;Dbxref=GenBank:WP_000018413.1;Name=WP_000018413.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=AD12_RS14870;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 25161 26366 . + . ID=gene-AD12_RS14865;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=paaE,ydbW;locus_tag=AD12_RS14865;old_locus_tag=AD12_1604 NZ_JJLK01000059.1 Protein Homology CDS 25161 26366 . + 0 ID=cds-WP_001206190.1;Parent=gene-AD12_RS14865;Dbxref=GenBank:WP_001206190.1;Name=WP_001206190.1;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=AD12_RS14865;product=bifunctional 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206190.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 26393 27706 . + . ID=gene-AD12_RS14860;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=AD12_RS14860;old_locus_tag=AD12_1605 NZ_JJLK01000059.1 Protein Homology CDS 26393 27706 . + 0 ID=cds-WP_001484558.1;Parent=gene-AD12_RS14860;Dbxref=GenBank:WP_001484558.1;Name=WP_001484558.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=AD12_RS14860;product=phenylacetate--CoA ligase PaaK;protein_id=WP_001484558.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 27807 28757 . + . ID=gene-AD12_RS14855;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=AD12_RS14855;old_locus_tag=AD12_1606 NZ_JJLK01000059.1 Protein Homology CDS 27807 28757 . + 0 ID=cds-WP_000039892.1;Parent=gene-AD12_RS14855;Dbxref=GenBank:WP_000039892.1;Name=WP_000039892.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=AD12_RS14855;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_000039892.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 28739 29329 . + . ID=gene-AD12_RS14850;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=AD12_RS14850;old_locus_tag=AD12_1607 NZ_JJLK01000059.1 Protein Homology CDS 28739 29329 . + 0 ID=cds-WP_001123457.1;Parent=gene-AD12_RS14850;Dbxref=GenBank:WP_001123457.1;Name=WP_001123457.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=AD12_RS14850;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123457.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 29561 30421 . + . ID=gene-AD12_RS14845;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AD12_RS14845;old_locus_tag=AD12_1608 NZ_JJLK01000059.1 Protein Homology CDS 29561 30421 . + 0 ID=cds-WP_000097794.1;Parent=gene-AD12_RS14845;Dbxref=GenBank:WP_000097794.1;Name=WP_000097794.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AD12_RS14845;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097794.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 30485 32791 . + . ID=gene-AD12_RS14840;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;locus_tag=AD12_RS14840;old_locus_tag=AD12_1609 NZ_JJLK01000059.1 Protein Homology CDS 30485 32791 . + 0 ID=cds-WP_000477179.1;Parent=gene-AD12_RS14840;Dbxref=GenBank:WP_000477179.1;Name=WP_000477179.1;gbkey=CDS;gene=ydbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AD12_RS14840;product=DUF2773 domain-containing bactofilin;protein_id=WP_000477179.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 32962 33567 . + . ID=gene-AD12_RS14835;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=AD12_RS14835;old_locus_tag=AD12_1610 NZ_JJLK01000059.1 Protein Homology CDS 32962 33567 . + 0 ID=cds-WP_000177525.1;Parent=gene-AD12_RS14835;Dbxref=GenBank:WP_000177525.1;Name=WP_000177525.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynbA;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=AD12_RS14835;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177525.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 33567 34463 . + . ID=gene-AD12_RS14830;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=AD12_RS14830;old_locus_tag=AD12_1611 NZ_JJLK01000059.1 Protein Homology CDS 33567 34463 . + 0 ID=cds-WP_000890909.1;Parent=gene-AD12_RS14830;Dbxref=GenBank:WP_000890909.1;Name=WP_000890909.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=ynbB;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AD12_RS14830;product=phosphatidate cytidylyltransferase;protein_id=WP_000890909.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 34479 36236 . + . ID=gene-AD12_RS14825;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AD12_RS14825;old_locus_tag=AD12_1612 NZ_JJLK01000059.1 Protein Homology CDS 34479 36236 . + 0 ID=cds-WP_000431817.1;Parent=gene-AD12_RS14825;Dbxref=GenBank:WP_000431817.1;Name=WP_000431817.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310039.1;locus_tag=AD12_RS14825;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_000431817.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 36226 37542 . + . ID=gene-AD12_RS14820;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AD12_RS14820;old_locus_tag=AD12_1613 NZ_JJLK01000059.1 Protein Homology CDS 36226 37542 . + 0 ID=cds-WP_050480829.1;Parent=gene-AD12_RS14820;Dbxref=GenBank:WP_050480829.1;Name=WP_050480829.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AD12_RS14820;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_050480829.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 37593 38198 . - . ID=gene-AD12_RS14815;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AD12_RS14815;old_locus_tag=AD12_1614 NZ_JJLK01000059.1 Protein Homology CDS 37593 38198 . - 0 ID=cds-WP_000048953.1;Parent=gene-AD12_RS14815;Dbxref=GenBank:WP_000048953.1;Name=WP_000048953.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=AD12_RS14815;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048953.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 38399 42301 . + . ID=gene-AD12_RS14810;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AD12_RS14810;old_locus_tag=AD12_1615 NZ_JJLK01000059.1 Protein Homology CDS 38399 42301 . + 0 ID=cds-WP_032284712.1;Parent=gene-AD12_RS14810;Dbxref=GenBank:WP_032284712.1;Name=WP_032284712.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AD12_RS14810;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032284712.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 42573 43373 . + . ID=gene-AD12_RS14805;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AD12_RS14805;old_locus_tag=AD12_1616 NZ_JJLK01000059.1 Protein Homology CDS 42573 43373 . + 0 ID=cds-WP_001027931.1;Parent=gene-AD12_RS14805;Dbxref=GenBank:WP_001027931.1;Name=WP_001027931.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AD12_RS14805;product=DUF218 domain-containing protein YdcF;protein_id=WP_001027931.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 43570 45009 . + . ID=gene-AD12_RS14800;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AD12_RS14800;old_locus_tag=AD12_1617 NZ_JJLK01000059.1 Protein Homology CDS 43570 45009 . + 0 ID=cds-WP_000115957.1;Parent=gene-AD12_RS14800;Dbxref=GenBank:WP_000115957.1;Name=WP_000115957.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=AD12_RS14800;product=aldehyde dehydrogenase;protein_id=WP_000115957.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 45051 46052 . - . ID=gene-AD12_RS14795;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AD12_RS14795;old_locus_tag=AD12_1618 NZ_JJLK01000059.1 Protein Homology CDS 45051 46052 . - 0 ID=cds-WP_000048667.1;Parent=gene-AD12_RS14795;Dbxref=GenBank:WP_000048667.1;Name=WP_000048667.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AD12_RS14795;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048667.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 46241 46771 . + . ID=gene-AD12_RS14790;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AD12_RS14790;old_locus_tag=AD12_1619 NZ_JJLK01000059.1 Protein Homology CDS 46241 46771 . + 0 ID=cds-WP_001307188.1;Parent=gene-AD12_RS14790;Dbxref=GenBank:WP_001307188.1;Name=WP_001307188.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AD12_RS14790;product=cytochrome b561;protein_id=WP_001307188.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 47016 47189 . + . ID=gene-AD12_RS14785;Name=AD12_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS14785;old_locus_tag=AD12_1620 NZ_JJLK01000059.1 Protein Homology CDS 47016 47189 . + 0 ID=cds-WP_032286437.1;Parent=gene-AD12_RS14785;Dbxref=GenBank:WP_032286437.1;Name=WP_032286437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AD12_RS14785;product=hypothetical protein;protein_id=WP_032286437.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 47215 47283 . + . ID=gene-AD12_RS29255;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AD12_RS29255 NZ_JJLK01000059.1 Protein Homology CDS 47215 47283 . + 0 ID=cds-WP_212591405.1;Parent=gene-AD12_RS29255;Dbxref=GenBank:WP_212591405.1;Name=WP_212591405.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AD12_RS29255;product=hypothetical protein;protein_id=WP_212591405.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 47261 47410 . - . ID=gene-AD12_RS0123785;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AD12_RS0123785 NZ_JJLK01000059.1 Protein Homology CDS 47261 47410 . - 0 ID=cds-WP_001320773.1;Parent=gene-AD12_RS0123785;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AD12_RS0123785;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 47809 49449 . + . ID=gene-AD12_RS14780;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AD12_RS14780;old_locus_tag=AD12_1621 NZ_JJLK01000059.1 Protein Homology CDS 47809 49449 . + 0 ID=cds-WP_001098559.1;Parent=gene-AD12_RS14780;Dbxref=GenBank:WP_001098559.1;Name=WP_001098559.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AD12_RS14780;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098559.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 49487 50410 . - . ID=gene-AD12_RS14775;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AD12_RS14775;old_locus_tag=AD12_1622 NZ_JJLK01000059.1 Protein Homology CDS 49487 50410 . - 0 ID=cds-WP_001356191.1;Parent=gene-AD12_RS14775;Dbxref=GenBank:WP_001356191.1;Name=WP_001356191.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310054.2;locus_tag=AD12_RS14775;product=LysR substrate-binding domain-containing protein;protein_id=WP_001356191.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 50627 51970 . + . ID=gene-AD12_RS14770;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AD12_RS14770;old_locus_tag=AD12_1623 NZ_JJLK01000059.1 Protein Homology CDS 50627 51970 . + 0 ID=cds-WP_000013786.1;Parent=gene-AD12_RS14770;Dbxref=GenBank:WP_000013786.1;Name=WP_000013786.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AD12_RS14770;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013786.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 52195 53850 . + . ID=gene-AD12_RS14765;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AD12_RS14765;old_locus_tag=AD12_1624 NZ_JJLK01000059.1 Protein Homology CDS 52195 53850 . + 0 ID=cds-WP_000375956.1;Parent=gene-AD12_RS14765;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AD12_RS14765;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 53990 54214 . + . ID=gene-AD12_RS14760;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AD12_RS14760;old_locus_tag=AD12_1625 NZ_JJLK01000059.1 Protein Homology CDS 53990 54214 . + 0 ID=cds-WP_001296778.1;Parent=gene-AD12_RS14760;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AD12_RS14760;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 54277 54813 . + . ID=gene-AD12_RS14755;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AD12_RS14755;old_locus_tag=AD12_1626 NZ_JJLK01000059.1 Protein Homology CDS 54277 54813 . + 0 ID=cds-WP_000140884.1;Parent=gene-AD12_RS14755;Dbxref=GenBank:WP_000140884.1;Name=WP_000140884.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707645.2;locus_tag=AD12_RS14755;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140884.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 54808 55788 . - . ID=gene-AD12_RS14750;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AD12_RS14750;old_locus_tag=AD12_1627 NZ_JJLK01000059.1 Protein Homology CDS 54808 55788 . - 0 ID=cds-WP_001234058.1;Parent=gene-AD12_RS14750;Dbxref=GenBank:WP_001234058.1;Name=WP_001234058.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707644.1;locus_tag=AD12_RS14750;product=YdcK family protein;protein_id=WP_001234058.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 55912 56904 . + . ID=gene-AD12_RS14745;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AD12_RS14745;old_locus_tag=AD12_1628 NZ_JJLK01000059.1 Protein Homology CDS 55912 56904 . + 0 ID=cds-WP_001296725.1;Parent=gene-AD12_RS14745;Dbxref=GenBank:WP_001296725.1;Name=WP_001296725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AD12_RS14745;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001296725.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 56901 57494 . + . ID=gene-AD12_RS14740;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AD12_RS14740;old_locus_tag=AD12_1629 NZ_JJLK01000059.1 Protein Homology CDS 56901 57494 . + 0 ID=cds-WP_000586733.1;Parent=gene-AD12_RS14740;Dbxref=GenBank:WP_000586733.1;Name=WP_000586733.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AD12_RS14740;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586733.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 57797 58465 . + . ID=gene-AD12_RS14735;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AD12_RS14735;old_locus_tag=AD12_1631 NZ_JJLK01000059.1 Protein Homology CDS 57797 58465 . + 0 ID=cds-WP_001261013.1;Parent=gene-AD12_RS14735;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AD12_RS14735;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JJLK01000059.1 RefSeq pseudogene 58561 58988 . - . ID=gene-AD12_RS0123795;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AD12_RS0123795;partial=true;pseudo=true;start_range=.,58561 NZ_JJLK01000059.1 Protein Homology CDS 58561 58988 . - 0 ID=cds-AD12_RS0123795;Parent=gene-AD12_RS0123795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AD12_RS0123795;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,58561;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 58996 60204 . + . ID=gene-AD12_RS14730;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=AD12_RS14730;old_locus_tag=AD12_1633 NZ_JJLK01000059.1 Protein Homology CDS 58996 60204 . + 0 ID=cds-WP_001700630.1;Parent=gene-AD12_RS14730;Dbxref=GenBank:WP_001700630.1;Name=WP_001700630.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;gene=insQ;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AD12_RS14730;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_001700630.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 60244 61458 . - . ID=gene-AD12_RS14725;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AD12_RS14725;old_locus_tag=AD12_1634 NZ_JJLK01000059.1 Protein Homology CDS 60244 61458 . - 0 ID=cds-WP_001323465.1;Parent=gene-AD12_RS14725;Dbxref=GenBank:WP_001323465.1;Name=WP_001323465.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AD12_RS14725;product=BenE family transporter YdcO;protein_id=WP_001323465.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 61511 62047 . + . ID=gene-AD12_RS14720;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AD12_RS14720;old_locus_tag=AD12_1635 NZ_JJLK01000059.1 Protein Homology CDS 61511 62047 . + 0 ID=cds-WP_000429152.1;Parent=gene-AD12_RS14720;Dbxref=GenBank:WP_000429152.1;Name=WP_000429152.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AD12_RS14720;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429152.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 62120 64081 . + . ID=gene-AD12_RS14715;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AD12_RS14715;old_locus_tag=AD12_1636 NZ_JJLK01000059.1 Protein Homology CDS 62120 64081 . + 0 ID=cds-WP_001301045.1;Parent=gene-AD12_RS14715;Dbxref=GenBank:WP_001301045.1;Name=WP_001301045.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AD12_RS14715;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001301045.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 64173 64403 . - . ID=gene-AD12_RS14710;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AD12_RS14710;old_locus_tag=AD12_1637 NZ_JJLK01000059.1 Protein Homology CDS 64173 64403 . - 0 ID=cds-WP_000494244.1;Parent=gene-AD12_RS14710;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AD12_RS14710;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JJLK01000059.1 RefSeq pseudogene 64625 64779 . + . ID=gene-AD12_RS0123805;Name=AD12_RS0123805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123805;pseudo=true NZ_JJLK01000059.1 Protein Homology CDS 64625 64779 . + 0 ID=cds-AD12_RS0123805;Parent=gene-AD12_RS0123805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AD12_RS0123805;product=mRNA interferase;pseudo=true;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 64825 65241 . + . ID=gene-AD12_RS14705;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AD12_RS14705;old_locus_tag=AD12_1639 NZ_JJLK01000059.1 Protein Homology CDS 64825 65241 . + 0 ID=cds-WP_001270286.1;Parent=gene-AD12_RS14705;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AD12_RS14705;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 65320 66726 . + . ID=gene-AD12_RS14700;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AD12_RS14700;old_locus_tag=AD12_1640 NZ_JJLK01000059.1 Protein Homology CDS 65320 66726 . + 0 ID=cds-WP_001362758.1;Parent=gene-AD12_RS14700;Dbxref=GenBank:WP_001362758.1;Name=WP_001362758.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AD12_RS14700;product=PLP-dependent aminotransferase family protein;protein_id=WP_001362758.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 66971 68116 . + . ID=gene-AD12_RS14695;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AD12_RS14695;old_locus_tag=AD12_1641 NZ_JJLK01000059.1 Protein Homology CDS 66971 68116 . + 0 ID=cds-WP_000047445.1;Parent=gene-AD12_RS14695;Dbxref=GenBank:WP_000047445.1;Name=WP_000047445.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AD12_RS14695;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_000047445.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 68134 69147 . + . ID=gene-AD12_RS14690;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AD12_RS14690;old_locus_tag=AD12_1642 NZ_JJLK01000059.1 Protein Homology CDS 68134 69147 . + 0 ID=cds-WP_000220396.1;Parent=gene-AD12_RS14690;Dbxref=GenBank:WP_000220396.1;Name=WP_000220396.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AD12_RS14690;product=ABC transporter ATP-binding protein;protein_id=WP_000220396.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 69148 70089 . + . ID=gene-AD12_RS14685;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AD12_RS14685;old_locus_tag=AD12_1643 NZ_JJLK01000059.1 Protein Homology CDS 69148 70089 . + 0 ID=cds-WP_001251315.1;Parent=gene-AD12_RS14685;Dbxref=GenBank:WP_001251315.1;Name=WP_001251315.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310073.1;locus_tag=AD12_RS14685;product=ABC transporter permease;protein_id=WP_001251315.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 70079 70873 . + . ID=gene-AD12_RS14680;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AD12_RS14680;old_locus_tag=AD12_1644 NZ_JJLK01000059.1 Protein Homology CDS 70079 70873 . + 0 ID=cds-WP_000555471.1;Parent=gene-AD12_RS14680;Dbxref=GenBank:WP_000555471.1;Name=WP_000555471.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310074.1;locus_tag=AD12_RS14680;product=ABC transporter permease;protein_id=WP_000555471.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 70895 72319 . + . ID=gene-AD12_RS14675;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AD12_RS14675;old_locus_tag=AD12_1645 NZ_JJLK01000059.1 Protein Homology CDS 70895 72319 . + 0 ID=cds-WP_001163890.1;Parent=gene-AD12_RS14675;Dbxref=GenBank:WP_001163890.1;Name=WP_001163890.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=AD12_RS14675;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163890.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 72416 72511 . - . ID=gene-AD12_RS26535;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AD12_RS26535 NZ_JJLK01000059.1 Protein Homology CDS 72416 72511 . - 0 ID=cds-WP_001303494.1;Parent=gene-AD12_RS26535;Dbxref=GenBank:WP_001303494.1;Name=WP_001303494.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AD12_RS26535;product=stress response membrane protein YncL;protein_id=WP_001303494.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 72706 72879 . + . ID=gene-AD12_RS0123815;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AD12_RS0123815;old_locus_tag=AD12_1647 NZ_JJLK01000059.1 Protein Homology CDS 72706 72879 . + 0 ID=cds-WP_000061178.1;Parent=gene-AD12_RS0123815;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AD12_RS0123815;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 72965 73198 . + . ID=gene-AD12_RS14670;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AD12_RS14670;old_locus_tag=AD12_1648 NZ_JJLK01000059.1 Protein Homology CDS 72965 73198 . + 0 ID=cds-WP_000018633.1;Parent=gene-AD12_RS14670;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AD12_RS14670;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 73199 73648 . - . ID=gene-AD12_RS14665;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AD12_RS14665;old_locus_tag=AD12_1649 NZ_JJLK01000059.1 Protein Homology CDS 73199 73648 . - 0 ID=cds-WP_001076535.1;Parent=gene-AD12_RS14665;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AD12_RS14665;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 73645 74163 . - . ID=gene-AD12_RS14660;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AD12_RS14660;old_locus_tag=AD12_1650 NZ_JJLK01000059.1 Protein Homology CDS 73645 74163 . - 0 ID=cds-WP_001296723.1;Parent=gene-AD12_RS14660;Dbxref=GenBank:WP_001296723.1;Name=WP_001296723.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AD12_RS14660;product=GNAT family N-acetyltransferase;protein_id=WP_001296723.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 74344 75381 . + . ID=gene-AD12_RS14655;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AD12_RS14655;old_locus_tag=AD12_1651 NZ_JJLK01000059.1 Protein Homology CDS 74344 75381 . + 0 ID=cds-WP_001349876.1;Parent=gene-AD12_RS14655;Dbxref=GenBank:WP_001349876.1;Name=WP_001349876.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AD12_RS14655;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_001349876.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 75579 76244 . + . ID=gene-AD12_RS14650;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=AD12_RS14650;old_locus_tag=AD12_1652 NZ_JJLK01000059.1 Protein Homology CDS 75579 76244 . + 0 ID=cds-WP_001300742.1;Parent=gene-AD12_RS14650;Dbxref=GenBank:WP_001300742.1;Name=WP_001300742.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AD12_RS14650;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001300742.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 76280 78382 . - . ID=gene-AD12_RS14645;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AD12_RS14645;old_locus_tag=AD12_1653 NZ_JJLK01000059.1 Protein Homology CDS 76280 78382 . - 0 ID=cds-WP_000689379.1;Parent=gene-AD12_RS14645;Dbxref=GenBank:WP_000689379.1;Name=WP_000689379.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AD12_RS14645;product=TonB-dependent receptor PqqU;protein_id=WP_000689379.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 78624 79685 . + . ID=gene-AD12_RS14640;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AD12_RS14640;old_locus_tag=AD12_1654 NZ_JJLK01000059.1 Protein Homology CDS 78624 79685 . + 0 ID=cds-WP_000550675.1;Parent=gene-AD12_RS14640;Dbxref=GenBank:WP_000550675.1;Name=WP_000550675.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AD12_RS14640;product=YncE family protein;protein_id=WP_000550675.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 79800 81299 . - . ID=gene-AD12_RS14635;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AD12_RS14635;old_locus_tag=AD12_1655 NZ_JJLK01000059.1 Protein Homology CDS 79800 81299 . - 0 ID=cds-WP_032286438.1;Parent=gene-AD12_RS14635;Dbxref=GenBank:WP_032286438.1;Name=WP_032286438.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AD12_RS14635;product=L-asparagine permease;protein_id=WP_032286438.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 81566 82183 . + . ID=gene-AD12_RS14630;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AD12_RS14630;old_locus_tag=AD12_1657 NZ_JJLK01000059.1 Protein Homology CDS 81566 82183 . + 0 ID=cds-WP_000598869.1;Parent=gene-AD12_RS14630;Dbxref=GenBank:WP_000598869.1;Name=WP_000598869.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AD12_RS14630;product=glutathione S-transferase family protein;protein_id=WP_000598869.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 82259 82471 . + . ID=gene-AD12_RS14625;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AD12_RS14625;old_locus_tag=AD12_1658 NZ_JJLK01000059.1 Protein Homology CDS 82259 82471 . + 0 ID=cds-WP_000882235.1;Parent=gene-AD12_RS14625;Dbxref=GenBank:WP_000882235.1;Name=WP_000882235.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310086.1;locus_tag=AD12_RS14625;product=YncH family protein;protein_id=WP_000882235.1;transl_table=11 NZ_JJLK01000059.1 RefSeq gene 83292 84133 . + . ID=gene-AD12_RS14620;Name=tssI;end_range=84133,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AD12_RS14620;old_locus_tag=AD12_1659;partial=true NZ_JJLK01000059.1 Protein Homology CDS 83292 84133 . + 0 ID=cds-WP_001726026.1;Parent=gene-AD12_RS14620;Dbxref=GenBank:WP_001726026.1;Name=WP_001726026.1;Ontology_term=GO:0033103;end_range=84133,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AD12_RS14620;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_001726026.1;transl_table=11 ##sequence-region NZ_JJLK01000060.1 1 38511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000060.1 RefSeq region 1 38511 . + . ID=NZ_JJLK01000060.1:1..38511;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000060.1 RefSeq pseudogene 1 666 . + . ID=gene-AD12_RS14615;Name=AD12_RS14615;end_range=666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS14615;old_locus_tag=AD12_1660;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000060.1 Protein Homology CDS 1 666 . + 0 ID=cds-AD12_RS14615;Parent=gene-AD12_RS14615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=666,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS14615;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 717 944 . + . ID=gene-AD12_RS14610;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AD12_RS14610;old_locus_tag=AD12_1661 NZ_JJLK01000060.1 Protein Homology CDS 717 944 . + 0 ID=cds-WP_001120141.1;Parent=gene-AD12_RS14610;Dbxref=GenBank:WP_001120141.1;Name=WP_001120141.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310091.1;locus_tag=AD12_RS14610;product=tautomerase PptA;protein_id=WP_001120141.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 948 1517 . - . ID=gene-AD12_RS14605;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AD12_RS14605;old_locus_tag=AD12_1662 NZ_JJLK01000060.1 Protein Homology CDS 948 1517 . - 0 ID=cds-WP_000085912.1;Parent=gene-AD12_RS14605;Dbxref=GenBank:WP_000085912.1;Name=WP_000085912.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AD12_RS14605;product=flavin reductase family protein;protein_id=WP_000085912.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 1690 2535 . + . ID=gene-AD12_RS14600;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AD12_RS14600;old_locus_tag=AD12_1663 NZ_JJLK01000060.1 Protein Homology CDS 1690 2535 . + 0 ID=cds-WP_000187896.1;Parent=gene-AD12_RS14600;Dbxref=GenBank:WP_000187896.1;Name=WP_000187896.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AD12_RS14600;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187896.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 2631 3524 . - . ID=gene-AD12_RS14595;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AD12_RS14595;old_locus_tag=AD12_1664 NZ_JJLK01000060.1 Protein Homology CDS 2631 3524 . - 0 ID=cds-WP_001489495.1;Parent=gene-AD12_RS14595;Dbxref=GenBank:WP_001489495.1;Name=WP_001489495.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AD12_RS14595;product=PhzF family isomerase;protein_id=WP_001489495.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 3603 4283 . - . ID=gene-AD12_RS14590;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD12_RS14590;old_locus_tag=AD12_1665 NZ_JJLK01000060.1 Protein Homology CDS 3603 4283 . - 0 ID=cds-WP_000617115.1;Parent=gene-AD12_RS14590;Dbxref=GenBank:WP_000617115.1;Name=WP_000617115.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AD12_RS14590;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 4280 4975 . - . ID=gene-AD12_RS14585;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AD12_RS14585;old_locus_tag=AD12_1666 NZ_JJLK01000060.1 Protein Homology CDS 4280 4975 . - 0 ID=cds-WP_001166353.1;Parent=gene-AD12_RS14585;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AD12_RS14585;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 4975 6519 . - . ID=gene-AD12_RS14580;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD12_RS14580;old_locus_tag=AD12_1667 NZ_JJLK01000060.1 Protein Homology CDS 4975 6519 . - 0 ID=cds-WP_000702560.1;Parent=gene-AD12_RS14580;Dbxref=GenBank:WP_000702560.1;Name=WP_000702560.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AD12_RS14580;product=nitrate reductase subunit beta;protein_id=WP_000702560.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 6516 10256 . - . ID=gene-AD12_RS14575;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AD12_RS14575;old_locus_tag=AD12_1668 NZ_JJLK01000060.1 Protein Homology CDS 6516 10256 . - 0 ID=cds-WP_032286440.1;Parent=gene-AD12_RS14575;Dbxref=GenBank:WP_032286440.1;Name=WP_032286440.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AD12_RS14575;product=nitrate reductase Z subunit alpha;protein_id=WP_032286440.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 10338 11726 . - . ID=gene-AD12_RS14570;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AD12_RS14570;old_locus_tag=AD12_1669 NZ_JJLK01000060.1 Protein Homology CDS 10338 11726 . - 0 ID=cds-WP_032286441.1;Parent=gene-AD12_RS14570;Dbxref=GenBank:WP_032286441.1;Name=WP_032286441.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AD12_RS14570;product=nitrate/nitrite transporter NarU;protein_id=WP_032286441.1;transl_table=11 NZ_JJLK01000060.1 RefSeq pseudogene 12050 13380 . - . ID=gene-AD12_RS0123820;Name=AD12_RS0123820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123820;old_locus_tag=AD12_1670;pseudo=true NZ_JJLK01000060.1 Protein Homology CDS 12050 13380 . - 0 ID=cds-AD12_RS0123820;Parent=gene-AD12_RS0123820;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AD12_RS0123820;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000060.1 RefSeq pseudogene 13419 13694 . - . ID=gene-AD12_RS14565;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AD12_RS14565;old_locus_tag=AD12_1671;partial=true;pseudo=true;start_range=.,13419 NZ_JJLK01000060.1 Protein Homology CDS 13419 13694 . - 0 ID=cds-AD12_RS14565;Parent=gene-AD12_RS14565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AD12_RS14565;partial=true;product=porin;pseudo=true;start_range=.,13419;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 13953 14834 . - . ID=gene-AD12_RS14560;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AD12_RS14560;old_locus_tag=AD12_1672 NZ_JJLK01000060.1 Protein Homology CDS 13953 14834 . - 0 ID=cds-WP_000198210.1;Parent=gene-AD12_RS14560;Dbxref=GenBank:WP_000198210.1;Name=WP_000198210.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707617.1;locus_tag=AD12_RS14560;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198210.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 15066 18113 . + . ID=gene-AD12_RS14550;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD12_RS14550;old_locus_tag=AD12_1674 NZ_JJLK01000060.1 Protein Homology CDS 15066 18113 . + 0 ID=cds-WP_014639908.1;Parent=gene-AD12_RS14550;Dbxref=GenBank:WP_014639908.1;Name=WP_014639908.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AD12_RS14550;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014639908.1;transl_except=(pos:15651..15653%2Caa:Sec);transl_table=11 NZ_JJLK01000060.1 RefSeq gene 18126 19010 . + . ID=gene-AD12_RS14545;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AD12_RS14545;old_locus_tag=AD12_1675 NZ_JJLK01000060.1 Protein Homology CDS 18126 19010 . + 0 ID=cds-WP_001391970.1;Parent=gene-AD12_RS14545;Dbxref=GenBank:WP_001391970.1;Name=WP_001391970.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AD12_RS14545;product=formate dehydrogenase N subunit beta;protein_id=WP_001391970.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 19003 19656 . + . ID=gene-AD12_RS14540;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AD12_RS14540;old_locus_tag=AD12_1676 NZ_JJLK01000060.1 Protein Homology CDS 19003 19656 . + 0 ID=cds-WP_000045648.1;Parent=gene-AD12_RS14540;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AD12_RS14540;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 19885 20169 . - . ID=gene-AD12_RS14535;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AD12_RS14535;old_locus_tag=AD12_1677 NZ_JJLK01000060.1 Protein Homology CDS 19885 20169 . - 0 ID=cds-WP_000781371.1;Parent=gene-AD12_RS14535;Dbxref=GenBank:WP_000781371.1;Name=WP_000781371.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AD12_RS14535;product=HigA family addiction module antitoxin;protein_id=WP_000781371.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 20315 21325 . - . ID=gene-AD12_RS14530;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AD12_RS14530;old_locus_tag=AD12_1678 NZ_JJLK01000060.1 Protein Homology CDS 20315 21325 . - 0 ID=cds-WP_032286442.1;Parent=gene-AD12_RS14530;Dbxref=GenBank:WP_032286442.1;Name=WP_032286442.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AD12_RS14530;product=alcohol dehydrogenase AdhP;protein_id=WP_032286442.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 21459 23156 . - . ID=gene-AD12_RS14525;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AD12_RS14525;old_locus_tag=AD12_1679 NZ_JJLK01000060.1 Protein Homology CDS 21459 23156 . - 0 ID=cds-WP_000433464.1;Parent=gene-AD12_RS14525;Dbxref=GenBank:WP_000433464.1;Name=WP_000433464.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=AD12_RS14525;product=malate dehydrogenase;protein_id=WP_000433464.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 23313 23450 . - . ID=gene-AD12_RS14520;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AD12_RS14520;old_locus_tag=AD12_1680 NZ_JJLK01000060.1 Protein Homology CDS 23313 23450 . - 0 ID=cds-WP_000841554.1;Parent=gene-AD12_RS14520;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AD12_RS14520;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 23552 23767 . - . ID=gene-AD12_RS14515;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AD12_RS14515;old_locus_tag=AD12_1681 NZ_JJLK01000060.1 Protein Homology CDS 23552 23767 . - 0 ID=cds-WP_000495771.1;Parent=gene-AD12_RS14515;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AD12_RS14515;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 24112 24543 . + . ID=gene-AD12_RS14510;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AD12_RS14510;old_locus_tag=AD12_1682 NZ_JJLK01000060.1 Protein Homology CDS 24112 24543 . + 0 ID=cds-WP_000152305.1;Parent=gene-AD12_RS14510;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AD12_RS14510;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 24599 25525 . - . ID=gene-AD12_RS14505;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AD12_RS14505;old_locus_tag=AD12_1683 NZ_JJLK01000060.1 Protein Homology CDS 24599 25525 . - 0 ID=cds-WP_032286443.1;Parent=gene-AD12_RS14505;Dbxref=GenBank:WP_032286443.1;Name=WP_032286443.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AD12_RS14505;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_032286443.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 25518 26504 . - . ID=gene-AD12_RS14500;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AD12_RS14500;old_locus_tag=AD12_1684 NZ_JJLK01000060.1 Protein Homology CDS 25518 26504 . - 0 ID=cds-WP_000193507.1;Parent=gene-AD12_RS14500;Dbxref=GenBank:WP_000193507.1;Name=WP_000193507.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AD12_RS14500;product=ABC transporter ATP-binding protein;protein_id=WP_000193507.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 26501 27397 . - . ID=gene-AD12_RS14495;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AD12_RS14495;old_locus_tag=AD12_1685 NZ_JJLK01000060.1 Protein Homology CDS 26501 27397 . - 0 ID=cds-WP_000979608.1;Parent=gene-AD12_RS14495;Dbxref=GenBank:WP_000979608.1;Name=WP_000979608.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AD12_RS14495;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979608.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 27394 28416 . - . ID=gene-AD12_RS14490;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AD12_RS14490;old_locus_tag=AD12_1686 NZ_JJLK01000060.1 Protein Homology CDS 27394 28416 . - 0 ID=cds-WP_000145096.1;Parent=gene-AD12_RS14490;Dbxref=GenBank:WP_000145096.1;Name=WP_000145096.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AD12_RS14490;product=ABC transporter permease;protein_id=WP_000145096.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 28418 29968 . - . ID=gene-AD12_RS14485;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AD12_RS14485;old_locus_tag=AD12_1687 NZ_JJLK01000060.1 Protein Homology CDS 28418 29968 . - 0 ID=cds-WP_000830574.1;Parent=gene-AD12_RS14485;Dbxref=GenBank:WP_000830574.1;Name=WP_000830574.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AD12_RS14485;product=ABC transporter substrate-binding protein;protein_id=WP_000830574.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 29982 30563 . - . ID=gene-AD12_RS14480;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AD12_RS14480;old_locus_tag=AD12_1688 NZ_JJLK01000060.1 Protein Homology CDS 29982 30563 . - 0 ID=cds-WP_001285846.1;Parent=gene-AD12_RS14480;Dbxref=GenBank:WP_001285846.1;Name=WP_001285846.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310119.1;locus_tag=AD12_RS14480;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285846.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 30821 33220 . - . ID=gene-AD12_RS14475;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AD12_RS14475;old_locus_tag=AD12_1689 NZ_JJLK01000060.1 Protein Homology CDS 30821 33220 . - 0 ID=cds-WP_077745028.1;Parent=gene-AD12_RS14475;Dbxref=GenBank:WP_077745028.1;Name=WP_077745028.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AD12_RS14475;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_077745028.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 33245 34627 . - . ID=gene-AD12_RS0123825;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AD12_RS0123825;old_locus_tag=AD12_1690 NZ_JJLK01000060.1 Protein Homology CDS 33245 34627 . - 0 ID=cds-WP_000426272.1;Parent=gene-AD12_RS0123825;Dbxref=GenBank:WP_000426272.1;Name=WP_000426272.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AD12_RS0123825;product=diguanylate cyclase DosC;protein_id=WP_000426272.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 35004 36323 . - . ID=gene-AD12_RS14470;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AD12_RS14470;old_locus_tag=AD12_1691 NZ_JJLK01000060.1 Protein Homology CDS 35004 36323 . - 0 ID=cds-WP_000350395.1;Parent=gene-AD12_RS14470;Dbxref=GenBank:WP_000350395.1;Name=WP_000350395.1;Ontology_term=GO:0016798;gbkey=CDS;gene=digH;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AD12_RS14470;product=family 10 glycosylhydrolase;protein_id=WP_000350395.1;transl_table=11 NZ_JJLK01000060.1 RefSeq gene 36454 37989 . - . ID=gene-AD12_RS14465;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AD12_RS14465;old_locus_tag=AD12_1692 NZ_JJLK01000060.1 Protein Homology CDS 36454 37989 . - 0 ID=cds-WP_000246019.1;Parent=gene-AD12_RS14465;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AD12_RS14465;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JJLK01000060.1 RefSeq pseudogene 38145 38511 . - . ID=gene-AD12_RS14460;Name=AD12_RS14460;end_range=38511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS14460;old_locus_tag=AD12_1693;partial=true;pseudo=true NZ_JJLK01000060.1 Protein Homology CDS 38145 38511 . - 1 ID=cds-AD12_RS14460;Parent=gene-AD12_RS14460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=38511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD12_RS14460;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000061.1 1 3640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000061.1 RefSeq region 1 3640 . + . ID=NZ_JJLK01000061.1:1..3640;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000061.1 RefSeq pseudogene 1 124 . - . ID=gene-AD12_RS25645;Name=AD12_RS25645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS25645;old_locus_tag=AD12_1694;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000061.1 Protein Homology CDS 1 124 . - 0 ID=cds-AD12_RS25645;Parent=gene-AD12_RS25645;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AD12_RS25645;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000061.1 RefSeq gene 124 3483 . - . ID=gene-AD12_RS26560;Name=AD12_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26560 NZ_JJLK01000061.1 Protein Homology CDS 124 3483 . - 0 ID=cds-WP_071999185.1;Parent=gene-AD12_RS26560;Dbxref=GenBank:WP_071999185.1;Name=WP_071999185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514265.1;locus_tag=AD12_RS26560;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_071999185.1;transl_table=11 NZ_JJLK01000061.1 RefSeq gene 3548 3640 . - . ID=gene-AD12_RS0123835;Name=AD12_RS0123835;end_range=3640,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123835;partial=true NZ_JJLK01000061.1 Protein Homology CDS 3548 3640 . - 0 ID=cds-WP_032195428.1;Parent=gene-AD12_RS0123835;Dbxref=GenBank:WP_032195428.1;Name=WP_032195428.1;Ontology_term=GO:0044384;end_range=3640,.;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309149.1;locus_tag=AD12_RS0123835;partial=true;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032195428.1;transl_table=11 ##sequence-region NZ_JJLK01000062.1 1 4613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000062.1 RefSeq region 1 4613 . + . ID=NZ_JJLK01000062.1:1..4613;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000062.1 RefSeq gene 1 552 . - . ID=gene-AD12_RS14440;Name=AD12_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS14440;old_locus_tag=AD12_1699;partial=true;start_range=.,1 NZ_JJLK01000062.1 Protein Homology CDS 1 552 . - 0 ID=cds-WP_032286448.1;Parent=gene-AD12_RS14440;Dbxref=GenBank:WP_032286448.1;Name=WP_032286448.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AD12_RS14440;partial=true;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032286448.1;start_range=.,1;transl_table=11 NZ_JJLK01000062.1 RefSeq gene 619 4101 . - . ID=gene-AD12_RS14435;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AD12_RS14435;old_locus_tag=AD12_1700 NZ_JJLK01000062.1 Protein Homology CDS 619 4101 . - 0 ID=cds-WP_032286450.1;Parent=gene-AD12_RS14435;Dbxref=GenBank:WP_032286450.1;Name=WP_032286450.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AD12_RS14435;product=phage attachment tail tip protein J;protein_id=WP_032286450.1;transl_table=11 NZ_JJLK01000062.1 RefSeq gene 4161 4613 . - . ID=gene-AD12_RS14430;Name=AD12_RS14430;end_range=4613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS14430;old_locus_tag=AD12_1701;partial=true NZ_JJLK01000062.1 Protein Homology CDS 4161 4613 . - 0 ID=cds-WP_021549770.1;Parent=gene-AD12_RS14430;Dbxref=GenBank:WP_021549770.1;Name=WP_021549770.1;end_range=4613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309674.2;locus_tag=AD12_RS14430;partial=true;product=tail assembly protein;protein_id=WP_021549770.1;transl_table=11 ##sequence-region NZ_JJLK01000063.1 1 361136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000063.1 RefSeq region 1 361136 . + . ID=NZ_JJLK01000063.1:1..361136;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000063.1 RefSeq gene 631 2220 . + . ID=gene-AD12_RS14425;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AD12_RS14425;old_locus_tag=AD12_1703 NZ_JJLK01000063.1 Protein Homology CDS 631 2220 . + 0 ID=cds-WP_001187566.1;Parent=gene-AD12_RS14425;Dbxref=GenBank:WP_001187566.1;Name=WP_001187566.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AD12_RS14425;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187566.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 2232 3521 . + . ID=gene-AD12_RS14420;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AD12_RS14420;old_locus_tag=AD12_1704 NZ_JJLK01000063.1 Protein Homology CDS 2232 3521 . + 0 ID=cds-WP_000866807.1;Parent=gene-AD12_RS14420;Dbxref=GenBank:WP_000866807.1;Name=WP_000866807.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AD12_RS14420;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866807.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 3518 4843 . - . ID=gene-AD12_RS14415;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AD12_RS14415;old_locus_tag=AD12_1705 NZ_JJLK01000063.1 Protein Homology CDS 3518 4843 . - 0 ID=cds-WP_000148529.1;Parent=gene-AD12_RS14415;Dbxref=GenBank:WP_000148529.1;Name=WP_000148529.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AD12_RS14415;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148529.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 4840 6216 . - . ID=gene-AD12_RS14410;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AD12_RS14410;old_locus_tag=AD12_1706 NZ_JJLK01000063.1 Protein Homology CDS 4840 6216 . - 0 ID=cds-WP_001211921.1;Parent=gene-AD12_RS14410;Dbxref=GenBank:WP_001211921.1;Name=WP_001211921.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AD12_RS14410;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211921.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 6454 6879 . + . ID=gene-AD12_RS14405;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AD12_RS14405;old_locus_tag=AD12_1708 NZ_JJLK01000063.1 Protein Homology CDS 6454 6879 . + 0 ID=cds-WP_000828222.1;Parent=gene-AD12_RS14405;Dbxref=GenBank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AD12_RS14405;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 6881 7576 . - . ID=gene-AD12_RS14400;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AD12_RS14400;old_locus_tag=AD12_1709 NZ_JJLK01000063.1 Protein Homology CDS 6881 7576 . - 0 ID=cds-WP_001084037.1;Parent=gene-AD12_RS14400;Dbxref=GenBank:WP_001084037.1;Name=WP_001084037.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418429.1;locus_tag=AD12_RS14400;product=DUF1481 domain-containing protein;protein_id=WP_001084037.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 7589 7861 . - . ID=gene-AD12_RS14395;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AD12_RS14395;old_locus_tag=AD12_1710 NZ_JJLK01000063.1 Protein Homology CDS 7589 7861 . - 0 ID=cds-WP_001044513.1;Parent=gene-AD12_RS14395;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AD12_RS14395;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 8048 8638 . - . ID=gene-AD12_RS14390;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AD12_RS14390;old_locus_tag=AD12_1711 NZ_JJLK01000063.1 Protein Homology CDS 8048 8638 . - 0 ID=cds-WP_000940105.1;Parent=gene-AD12_RS14390;Dbxref=GenBank:WP_000940105.1;Name=WP_000940105.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AD12_RS14390;product=YjaG family protein;protein_id=WP_000940105.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 8681 9352 . - . ID=gene-AD12_RS14385;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AD12_RS14385;old_locus_tag=AD12_1712 NZ_JJLK01000063.1 Protein Homology CDS 8681 9352 . - 0 ID=cds-WP_000362388.1;Parent=gene-AD12_RS14385;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AD12_RS14385;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 9362 10426 . - . ID=gene-AD12_RS14380;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AD12_RS14380;old_locus_tag=AD12_1713 NZ_JJLK01000063.1 Protein Homology CDS 9362 10426 . - 0 ID=cds-WP_000137657.1;Parent=gene-AD12_RS14380;Dbxref=GenBank:WP_000137657.1;Name=WP_000137657.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AD12_RS14380;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 10466 11239 . - . ID=gene-AD12_RS14375;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AD12_RS14375;old_locus_tag=AD12_1714 NZ_JJLK01000063.1 Protein Homology CDS 10466 11239 . - 0 ID=cds-WP_000373940.1;Parent=gene-AD12_RS14375;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AD12_RS14375;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 11334 11810 . + . ID=gene-AD12_RS14370;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AD12_RS14370;old_locus_tag=AD12_1715 NZ_JJLK01000063.1 Protein Homology CDS 11334 11810 . + 0 ID=cds-WP_000934302.1;Parent=gene-AD12_RS14370;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AD12_RS14370;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JJLK01000063.1 cmsearch riboswitch 11862 11962 . + . ID=id-NZ_JJLK01000063.1:11862..11962;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000063.1 RefSeq gene 12043 13938 . + . ID=gene-AD12_RS14365;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AD12_RS14365;old_locus_tag=AD12_1716 NZ_JJLK01000063.1 Protein Homology CDS 12043 13938 . + 0 ID=cds-WP_032176779.1;Parent=gene-AD12_RS14365;Dbxref=GenBank:WP_032176779.1;Name=WP_032176779.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=AD12_RS14365;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032176779.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 13938 14573 . + . ID=gene-AD12_RS14360;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AD12_RS14360;old_locus_tag=AD12_1717 NZ_JJLK01000063.1 Protein Homology CDS 13938 14573 . + 0 ID=cds-WP_000284601.1;Parent=gene-AD12_RS14360;Dbxref=GenBank:WP_000284601.1;Name=WP_000284601.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709787.2;locus_tag=AD12_RS14360;product=thiamine phosphate synthase;protein_id=WP_000284601.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 14566 15321 . + . ID=gene-AD12_RS14355;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AD12_RS14355;old_locus_tag=AD12_1718 NZ_JJLK01000063.1 Protein Homology CDS 14566 15321 . + 0 ID=cds-WP_000999737.1;Parent=gene-AD12_RS14355;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AD12_RS14355;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 15305 15505 . + . ID=gene-AD12_RS14350;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AD12_RS14350;old_locus_tag=AD12_1719 NZ_JJLK01000063.1 Protein Homology CDS 15305 15505 . + 0 ID=cds-WP_001166232.1;Parent=gene-AD12_RS14350;Dbxref=GenBank:WP_001166232.1;Name=WP_001166232.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502668.1;locus_tag=AD12_RS14350;product=sulfur carrier protein ThiS;protein_id=WP_001166232.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 15507 16277 . + . ID=gene-AD12_RS14345;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AD12_RS14345;old_locus_tag=AD12_1720 NZ_JJLK01000063.1 Protein Homology CDS 15507 16277 . + 0 ID=cds-WP_000944094.1;Parent=gene-AD12_RS14345;Dbxref=GenBank:WP_000944094.1;Name=WP_000944094.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AD12_RS14345;product=thiazole synthase;protein_id=WP_000944094.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 16274 17407 . + . ID=gene-AD12_RS14340;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AD12_RS14340;old_locus_tag=AD12_1721 NZ_JJLK01000063.1 Protein Homology CDS 16274 17407 . + 0 ID=cds-WP_000847461.1;Parent=gene-AD12_RS14340;Dbxref=GenBank:WP_000847461.1;Name=WP_000847461.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AD12_RS14340;product=2-iminoacetate synthase ThiH;protein_id=WP_000847461.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 17817 18356 . - . ID=gene-AD12_RS14335;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AD12_RS14335;old_locus_tag=AD12_1722 NZ_JJLK01000063.1 Protein Homology CDS 17817 18356 . - 0 ID=cds-WP_001307500.1;Parent=gene-AD12_RS14335;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AD12_RS14335;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 18569 22792 . - . ID=gene-AD12_RS14330;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AD12_RS14330;old_locus_tag=AD12_1723 NZ_JJLK01000063.1 Protein Homology CDS 18569 22792 . - 0 ID=cds-WP_000653944.1;Parent=gene-AD12_RS14330;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AD12_RS14330;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 22869 26897 . - . ID=gene-AD12_RS14325;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AD12_RS14325;old_locus_tag=AD12_1724 NZ_JJLK01000063.1 Protein Homology CDS 22869 26897 . - 0 ID=cds-WP_000263098.1;Parent=gene-AD12_RS14325;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AD12_RS14325;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 27217 27582 . - . ID=gene-AD12_RS14320;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AD12_RS14320;old_locus_tag=AD12_1725 NZ_JJLK01000063.1 Protein Homology CDS 27217 27582 . - 0 ID=cds-WP_000028878.1;Parent=gene-AD12_RS14320;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AD12_RS14320;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 27649 28146 . - . ID=gene-AD12_RS14315;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AD12_RS14315;old_locus_tag=AD12_1726 NZ_JJLK01000063.1 Protein Homology CDS 27649 28146 . - 0 ID=cds-WP_001207201.1;Parent=gene-AD12_RS14315;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AD12_RS14315;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 28559 29263 . - . ID=gene-AD12_RS14310;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AD12_RS14310;old_locus_tag=AD12_1727 NZ_JJLK01000063.1 Protein Homology CDS 28559 29263 . - 0 ID=cds-WP_001096684.1;Parent=gene-AD12_RS14310;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AD12_RS14310;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 29267 29695 . - . ID=gene-AD12_RS14305;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AD12_RS14305;old_locus_tag=AD12_1728 NZ_JJLK01000063.1 Protein Homology CDS 29267 29695 . - 0 ID=cds-WP_001085926.1;Parent=gene-AD12_RS14305;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AD12_RS14305;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 29854 30399 . - . ID=gene-AD12_RS14300;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AD12_RS14300;old_locus_tag=AD12_1729 NZ_JJLK01000063.1 Protein Homology CDS 29854 30399 . - 0 ID=cds-WP_001287516.1;Parent=gene-AD12_RS14300;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AD12_RS14300;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 30401 30784 . - . ID=gene-AD12_RS14295;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AD12_RS14295;old_locus_tag=AD12_1730 NZ_JJLK01000063.1 Protein Homology CDS 30401 30784 . - 0 ID=cds-WP_001275702.1;Parent=gene-AD12_RS14295;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AD12_RS14295;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 31014 32198 . - . ID=gene-AD12_RS14290;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AD12_RS14290;old_locus_tag=AD12_1731 NZ_JJLK01000063.1 Protein Homology CDS 31014 32198 . - 0 ID=cds-WP_032221392.1;Parent=gene-AD12_RS14290;Dbxref=GenBank:WP_032221392.1;Name=WP_032221392.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AD12_RS14290;product=elongation factor Tu;protein_id=WP_032221392.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 32269 34383 . - . ID=gene-AD12_RS14285;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AD12_RS14285;old_locus_tag=AD12_1732 NZ_JJLK01000063.1 Protein Homology CDS 32269 34383 . - 0 ID=cds-WP_001428267.1;Parent=gene-AD12_RS14285;Dbxref=GenBank:WP_001428267.1;Name=WP_001428267.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AD12_RS14285;product=elongation factor G;protein_id=WP_001428267.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 34480 34950 . - . ID=gene-AD12_RS14280;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AD12_RS14280;old_locus_tag=AD12_1733 NZ_JJLK01000063.1 Protein Homology CDS 34480 34950 . - 0 ID=cds-WP_001138043.1;Parent=gene-AD12_RS14280;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AD12_RS14280;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 35047 35421 . - . ID=gene-AD12_RS14275;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AD12_RS14275;old_locus_tag=AD12_1734 NZ_JJLK01000063.1 Protein Homology CDS 35047 35421 . - 0 ID=cds-WP_000246815.1;Parent=gene-AD12_RS14275;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AD12_RS14275;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 35547 35834 . - . ID=gene-AD12_RS14270;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AD12_RS14270;old_locus_tag=AD12_1735 NZ_JJLK01000063.1 Protein Homology CDS 35547 35834 . - 0 ID=cds-WP_000903377.1;Parent=gene-AD12_RS14270;Dbxref=GenBank:WP_000903377.1;Name=WP_000903377.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312221.1;locus_tag=AD12_RS14270;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903377.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 35842 36201 . - . ID=gene-AD12_RS14265;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AD12_RS14265;old_locus_tag=AD12_1736 NZ_JJLK01000063.1 Protein Homology CDS 35842 36201 . - 0 ID=cds-WP_000820720.1;Parent=gene-AD12_RS14265;Dbxref=GenBank:WP_000820720.1;Name=WP_000820720.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AD12_RS14265;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820720.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 36201 36587 . - . ID=gene-AD12_RS14260;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AD12_RS14260;old_locus_tag=AD12_1737 NZ_JJLK01000063.1 Protein Homology CDS 36201 36587 . - 0 ID=cds-WP_001209710.1;Parent=gene-AD12_RS14260;Dbxref=GenBank:WP_001209710.1;Name=WP_001209710.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709119.1;locus_tag=AD12_RS14260;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209710.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 36587 37309 . - . ID=gene-AD12_RS14255;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AD12_RS14255;old_locus_tag=AD12_1738 NZ_JJLK01000063.1 Protein Homology CDS 36587 37309 . - 0 ID=cds-WP_000091466.1;Parent=gene-AD12_RS14255;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AD12_RS14255;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 37476 38288 . - . ID=gene-AD12_RS14250;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AD12_RS14250;old_locus_tag=AD12_1739 NZ_JJLK01000063.1 Protein Homology CDS 37476 38288 . - 0 ID=cds-WP_000838261.1;Parent=gene-AD12_RS14250;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AD12_RS14250;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 38509 38727 . + . ID=gene-AD12_RS14245;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AD12_RS14245;old_locus_tag=AD12_1740 NZ_JJLK01000063.1 Protein Homology CDS 38509 38727 . + 0 ID=cds-WP_001153619.1;Parent=gene-AD12_RS14245;Dbxref=GenBank:WP_001153619.1;Name=WP_001153619.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AD12_RS14245;product=protein SlyX;protein_id=WP_001153619.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 38776 39366 . - . ID=gene-AD12_RS14240;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AD12_RS14240;old_locus_tag=AD12_1741 NZ_JJLK01000063.1 Protein Homology CDS 38776 39366 . - 0 ID=cds-WP_000861334.1;Parent=gene-AD12_RS14240;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AD12_RS14240;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 39461 39661 . - . ID=gene-AD12_RS14235;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AD12_RS14235;old_locus_tag=AD12_1742 NZ_JJLK01000063.1 Protein Homology CDS 39461 39661 . - 0 ID=cds-WP_001007730.1;Parent=gene-AD12_RS14235;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AD12_RS14235;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 39671 41476 . - . ID=gene-AD12_RS14230;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AD12_RS14230;old_locus_tag=AD12_1743 NZ_JJLK01000063.1 Protein Homology CDS 39671 41476 . - 0 ID=cds-WP_001399451.1;Parent=gene-AD12_RS14230;Dbxref=GenBank:WP_001399451.1;Name=WP_001399451.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AD12_RS14230;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_001399451.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 41476 42027 . - . ID=gene-AD12_RS14225;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AD12_RS14225;old_locus_tag=AD12_1744 NZ_JJLK01000063.1 Protein Homology CDS 41476 42027 . - 0 ID=cds-WP_001297514.1;Parent=gene-AD12_RS14225;Dbxref=GenBank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AD12_RS14225;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 42158 44071 . + . ID=gene-AD12_RS14220;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AD12_RS14220;old_locus_tag=AD12_1745 NZ_JJLK01000063.1 Protein Homology CDS 42158 44071 . + 0 ID=cds-WP_032286452.1;Parent=gene-AD12_RS14220;Dbxref=GenBank:WP_032286452.1;Name=WP_032286452.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AD12_RS14220;product=ABC transporter ATP-binding protein;protein_id=WP_032286452.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 44071 45093 . + . ID=gene-AD12_RS14215;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AD12_RS14215;old_locus_tag=AD12_1746 NZ_JJLK01000063.1 Protein Homology CDS 44071 45093 . + 0 ID=cds-WP_000057380.1;Parent=gene-AD12_RS14215;Dbxref=GenBank:WP_000057380.1;Name=WP_000057380.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312231.1;locus_tag=AD12_RS14215;product=hydrolase;protein_id=WP_000057380.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 45087 45305 . + . ID=gene-AD12_RS14210;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AD12_RS14210;old_locus_tag=AD12_1747 NZ_JJLK01000063.1 Protein Homology CDS 45087 45305 . + 0 ID=cds-WP_000907085.1;Parent=gene-AD12_RS14210;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AD12_RS14210;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 45359 46228 . + . ID=gene-AD12_RS14205;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AD12_RS14205;old_locus_tag=AD12_1748 NZ_JJLK01000063.1 Protein Homology CDS 45359 46228 . + 0 ID=cds-WP_001274680.1;Parent=gene-AD12_RS14205;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AD12_RS14205;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 46283 46687 . - . ID=gene-AD12_RS14200;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AD12_RS14200;old_locus_tag=AD12_1749 NZ_JJLK01000063.1 Protein Homology CDS 46283 46687 . - 0 ID=cds-WP_001148908.1;Parent=gene-AD12_RS14200;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AD12_RS14200;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 46989 47621 . + . ID=gene-AD12_RS14195;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AD12_RS14195;old_locus_tag=AD12_1750 NZ_JJLK01000063.1 Protein Homology CDS 46989 47621 . + 0 ID=cds-WP_000242755.1;Parent=gene-AD12_RS14195;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AD12_RS14195;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 47672 49762 . + . ID=gene-AD12_RS14190;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AD12_RS14190;old_locus_tag=AD12_1751 NZ_JJLK01000063.1 Protein Homology CDS 47672 49762 . + 0 ID=cds-WP_001356225.1;Parent=gene-AD12_RS14190;Dbxref=GenBank:WP_001356225.1;Name=WP_001356225.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AD12_RS14190;product=YccS/YhfK family putative transporter;protein_id=WP_001356225.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 49829 51049 . - . ID=gene-AD12_RS14185;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AD12_RS14185;old_locus_tag=AD12_1752 NZ_JJLK01000063.1 Protein Homology CDS 49829 51049 . - 0 ID=cds-WP_000963785.1;Parent=gene-AD12_RS14185;Dbxref=GenBank:WP_000963785.1;Name=WP_000963785.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AD12_RS14185;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963785.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 51135 51698 . - . ID=gene-AD12_RS14180;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AD12_RS14180;old_locus_tag=AD12_1753 NZ_JJLK01000063.1 Protein Homology CDS 51135 51698 . - 0 ID=cds-WP_000601847.1;Parent=gene-AD12_RS14180;Dbxref=GenBank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AD12_RS14180;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 51730 52332 . - . ID=gene-AD12_RS14175;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AD12_RS14175;old_locus_tag=AD12_1754 NZ_JJLK01000063.1 Protein Homology CDS 51730 52332 . - 0 ID=cds-WP_001280624.1;Parent=gene-AD12_RS14175;Dbxref=GenBank:WP_001280624.1;Name=WP_001280624.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AD12_RS14175;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280624.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 52322 52489 . - . ID=gene-AD12_RS0123845;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AD12_RS0123845 NZ_JJLK01000063.1 Protein Homology CDS 52322 52489 . - 0 ID=cds-WP_000736860.1;Parent=gene-AD12_RS0123845;Dbxref=GenBank:WP_000736860.1;Name=WP_000736860.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AD12_RS0123845;product=YhfG family protein;protein_id=WP_000736860.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 52594 53166 . - . ID=gene-AD12_RS14170;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AD12_RS14170;old_locus_tag=AD12_1755 NZ_JJLK01000063.1 Protein Homology CDS 52594 53166 . - 0 ID=cds-WP_000477226.1;Parent=gene-AD12_RS14170;Dbxref=GenBank:WP_000477226.1;Name=WP_000477226.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AD12_RS14170;product=peptidylprolyl isomerase A;protein_id=WP_000477226.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 53437 54618 . + . ID=gene-AD12_RS14165;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AD12_RS14165;old_locus_tag=AD12_1757 NZ_JJLK01000063.1 Protein Homology CDS 53437 54618 . + 0 ID=cds-WP_000185247.1;Parent=gene-AD12_RS14165;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AD12_RS14165;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 54880 57423 . + . ID=gene-AD12_RS14160;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AD12_RS14160;old_locus_tag=AD12_1759 NZ_JJLK01000063.1 Protein Homology CDS 54880 57423 . + 0 ID=cds-WP_000049213.1;Parent=gene-AD12_RS14160;Dbxref=GenBank:WP_000049213.1;Name=WP_000049213.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=AD12_RS14160;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049213.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 57420 57746 . + . ID=gene-AD12_RS14155;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AD12_RS14155;old_locus_tag=AD12_1760 NZ_JJLK01000063.1 Protein Homology CDS 57420 57746 . + 0 ID=cds-WP_000084764.1;Parent=gene-AD12_RS14155;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AD12_RS14155;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 57873 58679 . + . ID=gene-AD12_RS14150;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AD12_RS14150;old_locus_tag=AD12_1761 NZ_JJLK01000063.1 Protein Homology CDS 57873 58679 . + 0 ID=cds-WP_000493556.1;Parent=gene-AD12_RS14150;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AD12_RS14150;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 58698 60071 . + . ID=gene-AD12_RS14145;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AD12_RS14145;old_locus_tag=AD12_1762 NZ_JJLK01000063.1 Protein Homology CDS 58698 60071 . + 0 ID=cds-WP_000349855.1;Parent=gene-AD12_RS14145;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AD12_RS14145;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 60318 60485 . + . ID=gene-AD12_RS14140;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AD12_RS14140;old_locus_tag=AD12_1763 NZ_JJLK01000063.1 Protein Homology CDS 60318 60485 . + 0 ID=cds-WP_001031834.1;Parent=gene-AD12_RS14140;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AD12_RS14140;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 60780 62117 . + . ID=gene-AD12_RS14135;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AD12_RS14135;old_locus_tag=AD12_1764 NZ_JJLK01000063.1 Protein Homology CDS 60780 62117 . + 0 ID=cds-WP_001364275.1;Parent=gene-AD12_RS14135;Dbxref=GenBank:WP_001364275.1;Name=WP_001364275.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AD12_RS14135;product=fructoselysine/psicoselysine transporter;protein_id=WP_001364275.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 62138 63160 . + . ID=gene-AD12_RS14130;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AD12_RS14130;old_locus_tag=AD12_1765 NZ_JJLK01000063.1 Protein Homology CDS 62138 63160 . + 0 ID=cds-WP_001295163.1;Parent=gene-AD12_RS14130;Dbxref=GenBank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AD12_RS14130;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 63210 64040 . + . ID=gene-AD12_RS14125;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AD12_RS14125;old_locus_tag=AD12_1766 NZ_JJLK01000063.1 Protein Homology CDS 63210 64040 . + 0 ID=cds-WP_000847831.1;Parent=gene-AD12_RS14125;Dbxref=GenBank:WP_000847831.1;Name=WP_000847831.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AD12_RS14125;product=fructoselysine 3-epimerase;protein_id=WP_000847831.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 64037 64822 . + . ID=gene-AD12_RS14120;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AD12_RS14120;old_locus_tag=AD12_1767 NZ_JJLK01000063.1 Protein Homology CDS 64037 64822 . + 0 ID=cds-WP_000853346.1;Parent=gene-AD12_RS14120;Dbxref=GenBank:WP_000853346.1;Name=WP_000853346.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709147.1;locus_tag=AD12_RS14120;product=fructoselysine 6-kinase;protein_id=WP_000853346.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 64922 65653 . + . ID=gene-AD12_RS14115;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AD12_RS14115;old_locus_tag=AD12_1768 NZ_JJLK01000063.1 Protein Homology CDS 64922 65653 . + 0 ID=cds-WP_001276847.1;Parent=gene-AD12_RS14115;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AD12_RS14115;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 65805 66890 . - . ID=gene-AD12_RS14110;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AD12_RS14110;old_locus_tag=AD12_1769 NZ_JJLK01000063.1 Protein Homology CDS 65805 66890 . - 0 ID=cds-WP_000847144.1;Parent=gene-AD12_RS14110;Dbxref=GenBank:WP_000847144.1;Name=WP_000847144.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AD12_RS14110;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847144.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 66902 68206 . - . ID=gene-AD12_RS14105;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AD12_RS14105;old_locus_tag=AD12_1770 NZ_JJLK01000063.1 Protein Homology CDS 66902 68206 . - 0 ID=cds-WP_000366877.1;Parent=gene-AD12_RS14105;Dbxref=GenBank:WP_000366877.1;Name=WP_000366877.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709150.1;locus_tag=AD12_RS14105;product=YhfT family protein;protein_id=WP_000366877.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 68218 68571 . - . ID=gene-AD12_RS14100;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AD12_RS14100;old_locus_tag=AD12_1771 NZ_JJLK01000063.1 Protein Homology CDS 68218 68571 . - 0 ID=cds-WP_001297518.1;Parent=gene-AD12_RS14100;Dbxref=GenBank:WP_001297518.1;Name=WP_001297518.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AD12_RS14100;product=DUF2620 domain-containing protein;protein_id=WP_001297518.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 68582 69460 . - . ID=gene-AD12_RS14095;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AD12_RS14095;old_locus_tag=AD12_1772 NZ_JJLK01000063.1 Protein Homology CDS 68582 69460 . - 0 ID=cds-WP_000007003.1;Parent=gene-AD12_RS14095;Dbxref=GenBank:WP_000007003.1;Name=WP_000007003.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AD12_RS14095;product=phosphotriesterase-related protein;protein_id=WP_000007003.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 69457 70683 . - . ID=gene-AD12_RS14090;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=AD12_RS14090;old_locus_tag=AD12_1773 NZ_JJLK01000063.1 Protein Homology CDS 69457 70683 . - 0 ID=cds-WP_000090595.1;Parent=gene-AD12_RS14090;Dbxref=GenBank:WP_000090595.1;Name=WP_000090595.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AD12_RS14090;product=phosphopentomutase;protein_id=WP_000090595.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 70683 71846 . - . ID=gene-AD12_RS14085;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AD12_RS14085;old_locus_tag=AD12_1774 NZ_JJLK01000063.1 Protein Homology CDS 70683 71846 . - 0 ID=cds-WP_000497372.1;Parent=gene-AD12_RS14085;Dbxref=GenBank:WP_000497372.1;Name=WP_000497372.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709154.1;locus_tag=AD12_RS14085;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497372.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 71930 72292 . - . ID=gene-AD12_RS14080;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AD12_RS14080;old_locus_tag=AD12_1775 NZ_JJLK01000063.1 Protein Homology CDS 71930 72292 . - 0 ID=cds-WP_001298733.1;Parent=gene-AD12_RS14080;Dbxref=GenBank:WP_001298733.1;Name=WP_001298733.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AD12_RS14080;product=hypothetical protein;protein_id=WP_001298733.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 72309 73214 . - . ID=gene-AD12_RS14075;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AD12_RS14075;old_locus_tag=AD12_1776 NZ_JJLK01000063.1 Protein Homology CDS 72309 73214 . - 0 ID=cds-WP_001254819.1;Parent=gene-AD12_RS14075;Dbxref=GenBank:WP_001254819.1;Name=WP_001254819.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AD12_RS14075;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254819.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 73483 74487 . - . ID=gene-AD12_RS14070;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AD12_RS14070;old_locus_tag=AD12_1777 NZ_JJLK01000063.1 Protein Homology CDS 73483 74487 . - 0 ID=cds-WP_000165553.1;Parent=gene-AD12_RS14070;Dbxref=GenBank:WP_000165553.1;Name=WP_000165553.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AD12_RS14070;product=tryptophan--tRNA ligase;protein_id=WP_000165553.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 74480 75238 . - . ID=gene-AD12_RS14065;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AD12_RS14065;old_locus_tag=AD12_1778 NZ_JJLK01000063.1 Protein Homology CDS 74480 75238 . - 0 ID=cds-WP_001031729.1;Parent=gene-AD12_RS14065;Dbxref=GenBank:WP_001031729.1;Name=WP_001031729.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417844.1;locus_tag=AD12_RS14065;product=phosphoglycolate phosphatase;protein_id=WP_001031729.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 75231 75908 . - . ID=gene-AD12_RS14060;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AD12_RS14060;old_locus_tag=AD12_1779 NZ_JJLK01000063.1 Protein Homology CDS 75231 75908 . - 0 ID=cds-WP_000816280.1;Parent=gene-AD12_RS14060;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AD12_RS14060;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 75926 76762 . - . ID=gene-AD12_RS14055;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AD12_RS14055;old_locus_tag=AD12_1780 NZ_JJLK01000063.1 Protein Homology CDS 75926 76762 . - 0 ID=cds-WP_001392774.1;Parent=gene-AD12_RS14055;Dbxref=GenBank:WP_001392774.1;Name=WP_001392774.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AD12_RS14055;product=adenine-specific DNA-methyltransferase;protein_id=WP_001392774.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 76869 78155 . - . ID=gene-AD12_RS14050;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AD12_RS14050;old_locus_tag=AD12_1781 NZ_JJLK01000063.1 Protein Homology CDS 76869 78155 . - 0 ID=cds-WP_000343199.1;Parent=gene-AD12_RS14050;Dbxref=GenBank:WP_000343199.1;Name=WP_000343199.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AD12_RS14050;product=cell division protein DamX;protein_id=WP_000343199.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 78247 79335 . - . ID=gene-AD12_RS14045;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AD12_RS14045;old_locus_tag=AD12_1782 NZ_JJLK01000063.1 Protein Homology CDS 78247 79335 . - 0 ID=cds-WP_000439846.1;Parent=gene-AD12_RS14045;Dbxref=GenBank:WP_000439846.1;Name=WP_000439846.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AD12_RS14045;product=3-dehydroquinate synthase;protein_id=WP_000439846.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 79392 79913 . - . ID=gene-AD12_RS14040;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AD12_RS14040;old_locus_tag=AD12_1783 NZ_JJLK01000063.1 Protein Homology CDS 79392 79913 . - 0 ID=cds-WP_000818618.1;Parent=gene-AD12_RS14040;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AD12_RS14040;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 80314 81552 . - . ID=gene-AD12_RS14035;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AD12_RS14035;old_locus_tag=AD12_1784 NZ_JJLK01000063.1 Protein Homology CDS 80314 81552 . - 0 ID=cds-WP_000815968.1;Parent=gene-AD12_RS14035;Dbxref=GenBank:WP_000815968.1;Name=WP_000815968.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AD12_RS14035;product=DNA uptake porin HofQ;protein_id=WP_000815968.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 81464 81868 . - . ID=gene-AD12_RS14030;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AD12_RS14030;old_locus_tag=AD12_1785 NZ_JJLK01000063.1 Protein Homology CDS 81464 81868 . - 0 ID=cds-WP_001264141.1;Parent=gene-AD12_RS14030;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AD12_RS14030;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 81858 82298 . - . ID=gene-AD12_RS14025;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AD12_RS14025;old_locus_tag=AD12_1786 NZ_JJLK01000063.1 Protein Homology CDS 81858 82298 . - 0 ID=cds-WP_032286453.1;Parent=gene-AD12_RS14025;Dbxref=GenBank:WP_032286453.1;Name=WP_032286453.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AD12_RS14025;product=DNA utilization protein HofO;protein_id=WP_032286453.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 82282 82821 . - . ID=gene-AD12_RS14020;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AD12_RS14020;old_locus_tag=AD12_1787 NZ_JJLK01000063.1 Protein Homology CDS 82282 82821 . - 0 ID=cds-WP_032286454.1;Parent=gene-AD12_RS14020;Dbxref=GenBank:WP_032286454.1;Name=WP_032286454.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312263.1;locus_tag=AD12_RS14020;product=DNA utilization protein HofN;protein_id=WP_032286454.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 82821 83600 . - . ID=gene-AD12_RS14015;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AD12_RS14015;old_locus_tag=AD12_1788 NZ_JJLK01000063.1 Protein Homology CDS 82821 83600 . - 0 ID=cds-WP_001349954.1;Parent=gene-AD12_RS14015;Dbxref=GenBank:WP_001349954.1;Name=WP_001349954.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AD12_RS14015;product=DNA utilization protein HofM;protein_id=WP_001349954.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 83720 86272 . + . ID=gene-AD12_RS14010;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AD12_RS14010;old_locus_tag=AD12_1789 NZ_JJLK01000063.1 Protein Homology CDS 83720 86272 . + 0 ID=cds-WP_001300707.1;Parent=gene-AD12_RS14010;Dbxref=GenBank:WP_001300707.1;Name=WP_001300707.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AD12_RS14010;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001300707.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 86437 86997 . - . ID=gene-AD12_RS14005;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AD12_RS14005;old_locus_tag=AD12_1790 NZ_JJLK01000063.1 Protein Homology CDS 86437 86997 . - 0 ID=cds-WP_000045744.1;Parent=gene-AD12_RS14005;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AD12_RS14005;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 87317 89452 . + . ID=gene-AD12_RS14000;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AD12_RS14000;old_locus_tag=AD12_1792 NZ_JJLK01000063.1 Protein Homology CDS 87317 89452 . + 0 ID=cds-WP_032286455.1;Parent=gene-AD12_RS14000;Dbxref=GenBank:WP_032286455.1;Name=WP_032286455.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AD12_RS14000;product=intracellular growth attenuator protein IgaA;protein_id=WP_032286455.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 89517 90185 . + . ID=gene-AD12_RS13995;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AD12_RS13995;old_locus_tag=AD12_1793 NZ_JJLK01000063.1 Protein Homology CDS 89517 90185 . + 0 ID=cds-WP_001295168.1;Parent=gene-AD12_RS13995;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AD12_RS13995;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 90196 90597 . + . ID=gene-AD12_RS13990;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AD12_RS13990;old_locus_tag=AD12_1794 NZ_JJLK01000063.1 Protein Homology CDS 90196 90597 . + 0 ID=cds-WP_000660485.1;Parent=gene-AD12_RS13990;Dbxref=GenBank:WP_000660485.1;Name=WP_000660485.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709172.1;locus_tag=AD12_RS13990;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660485.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 90622 91500 . + . ID=gene-AD12_RS13985;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AD12_RS13985;old_locus_tag=AD12_1795 NZ_JJLK01000063.1 Protein Homology CDS 90622 91500 . + 0 ID=cds-WP_001135574.1;Parent=gene-AD12_RS13985;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AD12_RS13985;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 91635 93359 . - . ID=gene-AD12_RS13980;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AD12_RS13980;old_locus_tag=AD12_1796 NZ_JJLK01000063.1 Protein Homology CDS 91635 93359 . - 0 ID=cds-WP_000370831.1;Parent=gene-AD12_RS13980;Dbxref=GenBank:WP_000370831.1;Name=WP_000370831.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709174.1;locus_tag=AD12_RS13980;product=DUF4153 domain-containing protein;protein_id=WP_000370831.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 93738 95360 . + . ID=gene-AD12_RS13970;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AD12_RS13970;old_locus_tag=AD12_1799 NZ_JJLK01000063.1 Protein Homology CDS 93738 95360 . + 0 ID=cds-WP_001265681.1;Parent=gene-AD12_RS13970;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AD12_RS13970;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 95436 96788 . - . ID=gene-AD12_RS13965;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AD12_RS13965;old_locus_tag=AD12_1800 NZ_JJLK01000063.1 Protein Homology CDS 95436 96788 . - 0 ID=cds-WP_032286456.1;Parent=gene-AD12_RS13965;Dbxref=GenBank:WP_032286456.1;Name=WP_032286456.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AD12_RS13965;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_032286456.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 96785 97504 . - . ID=gene-AD12_RS13960;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AD12_RS13960;old_locus_tag=AD12_1801 NZ_JJLK01000063.1 Protein Homology CDS 96785 97504 . - 0 ID=cds-WP_001157751.1;Parent=gene-AD12_RS13960;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AD12_RS13960;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 97732 98208 . + . ID=gene-AD12_RS13955;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AD12_RS13955;old_locus_tag=AD12_1802 NZ_JJLK01000063.1 Protein Homology CDS 97732 98208 . + 0 ID=cds-WP_000856744.1;Parent=gene-AD12_RS13955;Dbxref=GenBank:WP_000856744.1;Name=WP_000856744.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312275.2;locus_tag=AD12_RS13955;product=transcription elongation factor GreB;protein_id=WP_000856744.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 98305 100626 . + . ID=gene-AD12_RS13950;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AD12_RS13950;old_locus_tag=AD12_1803 NZ_JJLK01000063.1 Protein Homology CDS 98305 100626 . + 0 ID=cds-WP_032173550.1;Parent=gene-AD12_RS13950;Dbxref=GenBank:WP_032173550.1;Name=WP_032173550.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AD12_RS13950;product=Tex family protein;protein_id=WP_032173550.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 101064 101291 . + . ID=gene-AD12_RS13945;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AD12_RS13945;old_locus_tag=AD12_1805 NZ_JJLK01000063.1 Protein Homology CDS 101064 101291 . + 0 ID=cds-WP_001200452.1;Parent=gene-AD12_RS13945;Dbxref=GenBank:WP_001200452.1;Name=WP_001200452.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AD12_RS13945;product=ferrous iron transporter A;protein_id=WP_001200452.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 101308 103629 . + . ID=gene-AD12_RS13940;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AD12_RS13940;old_locus_tag=AD12_1806 NZ_JJLK01000063.1 Protein Homology CDS 101308 103629 . + 0 ID=cds-WP_000737007.1;Parent=gene-AD12_RS13940;Dbxref=GenBank:WP_000737007.1;Name=WP_000737007.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AD12_RS13940;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737007.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 103629 103865 . + . ID=gene-AD12_RS13935;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AD12_RS13935;old_locus_tag=AD12_1807 NZ_JJLK01000063.1 Protein Homology CDS 103629 103865 . + 0 ID=cds-WP_000157586.1;Parent=gene-AD12_RS13935;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AD12_RS13935;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 104068 104946 . + . ID=gene-AD12_RS13930;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AD12_RS13930;old_locus_tag=AD12_1808 NZ_JJLK01000063.1 Protein Homology CDS 104068 104946 . + 0 ID=cds-WP_000039057.1;Parent=gene-AD12_RS13930;Dbxref=GenBank:WP_000039057.1;Name=WP_000039057.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AD12_RS13930;product=recombination-promoting nuclease RpnA;protein_id=WP_000039057.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 104975 105745 . - . ID=gene-AD12_RS13925;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AD12_RS13925;old_locus_tag=AD12_1809 NZ_JJLK01000063.1 Protein Homology CDS 104975 105745 . - 0 ID=cds-WP_001060069.1;Parent=gene-AD12_RS13925;Dbxref=GenBank:WP_001060069.1;Name=WP_001060069.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AD12_RS13925;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060069.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 105783 106466 . + . ID=gene-AD12_RS13920;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AD12_RS13920;old_locus_tag=AD12_1811 NZ_JJLK01000063.1 Protein Homology CDS 105783 106466 . + 0 ID=cds-WP_001309008.1;Parent=gene-AD12_RS13920;Dbxref=GenBank:WP_001309008.1;Name=WP_001309008.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AD12_RS13920;product=DNA utilization protein GntX;protein_id=WP_001309008.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 106525 107100 . + . ID=gene-AD12_RS13915;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AD12_RS13915;old_locus_tag=AD12_1812 NZ_JJLK01000063.1 Protein Homology CDS 106525 107100 . + 0 ID=cds-WP_000619389.1;Parent=gene-AD12_RS13915;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AD12_RS13915;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 107461 108777 . + . ID=gene-AD12_RS13910;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AD12_RS13910;old_locus_tag=AD12_1813 NZ_JJLK01000063.1 Protein Homology CDS 107461 108777 . + 0 ID=cds-WP_032198564.1;Parent=gene-AD12_RS13910;Dbxref=GenBank:WP_032198564.1;Name=WP_032198564.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AD12_RS13910;product=gluconate transporter;protein_id=WP_032198564.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 108822 110906 . - . ID=gene-AD12_RS13905;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AD12_RS13905;old_locus_tag=AD12_1814 NZ_JJLK01000063.1 Protein Homology CDS 108822 110906 . - 0 ID=cds-WP_000444354.1;Parent=gene-AD12_RS13905;Dbxref=GenBank:WP_000444354.1;Name=WP_000444354.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AD12_RS13905;product=4-alpha-glucanotransferase;protein_id=WP_000444354.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 110916 113309 . - . ID=gene-AD12_RS13900;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AD12_RS13900;old_locus_tag=AD12_1815 NZ_JJLK01000063.1 Protein Homology CDS 110916 113309 . - 0 ID=cds-WP_000081909.1;Parent=gene-AD12_RS13900;Dbxref=GenBank:WP_000081909.1;Name=WP_000081909.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AD12_RS13900;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 113921 116626 . + . ID=gene-AD12_RS13895;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AD12_RS13895;old_locus_tag=AD12_1816 NZ_JJLK01000063.1 Protein Homology CDS 113921 116626 . + 0 ID=cds-WP_000906970.1;Parent=gene-AD12_RS13895;Dbxref=GenBank:WP_000906970.1;Name=WP_000906970.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312287.1;locus_tag=AD12_RS13895;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906970.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 116669 117685 . - . ID=gene-AD12_RS0123850;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AD12_RS0123850 NZ_JJLK01000063.1 Protein Homology CDS 116669 117685 . - 0 ID=cds-WP_032286477.1;Parent=gene-AD12_RS0123850;Dbxref=GenBank:WP_032286477.1;Name=WP_032286477.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AD12_RS0123850;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_032286477.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 117689 118915 . - . ID=gene-AD12_RS13890;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AD12_RS13890;old_locus_tag=AD12_1818 NZ_JJLK01000063.1 Protein Homology CDS 117689 118915 . - 0 ID=cds-WP_001105503.1;Parent=gene-AD12_RS13890;Dbxref=GenBank:WP_001105503.1;Name=WP_001105503.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AD12_RS13890;product=RNA-splicing ligase RtcB;protein_id=WP_001105503.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 119104 120702 . + . ID=gene-AD12_RS13885;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AD12_RS13885;old_locus_tag=AD12_1819 NZ_JJLK01000063.1 Protein Homology CDS 119104 120702 . + 0 ID=cds-WP_001232938.1;Parent=gene-AD12_RS13885;Dbxref=GenBank:WP_001232938.1;Name=WP_001232938.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AD12_RS13885;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232938.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 120684 121442 . - . ID=gene-AD12_RS13880;Name=AD12_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13880;old_locus_tag=AD12_1820 NZ_JJLK01000063.1 Protein Homology CDS 120684 121442 . - 0 ID=cds-WP_000815099.1;Parent=gene-AD12_RS13880;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AD12_RS13880;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 121459 122289 . - . ID=gene-AD12_RS13875;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AD12_RS13875;old_locus_tag=AD12_1821 NZ_JJLK01000063.1 Protein Homology CDS 121459 122289 . - 0 ID=cds-WP_000928731.1;Parent=gene-AD12_RS13875;Dbxref=GenBank:WP_000928731.1;Name=WP_000928731.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AD12_RS13875;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928731.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 122334 122660 . - . ID=gene-AD12_RS13870;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AD12_RS13870;old_locus_tag=AD12_1822 NZ_JJLK01000063.1 Protein Homology CDS 122334 122660 . - 0 ID=cds-WP_000371934.1;Parent=gene-AD12_RS13870;Dbxref=GenBank:WP_000371934.1;Name=WP_000371934.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AD12_RS13870;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371934.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 122850 124355 . + . ID=gene-AD12_RS13865;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AD12_RS13865;old_locus_tag=AD12_1823 NZ_JJLK01000063.1 Protein Homology CDS 122850 124355 . + 0 ID=cds-WP_001498609.1;Parent=gene-AD12_RS13865;Dbxref=GenBank:WP_001498609.1;Name=WP_001498609.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417884.1;locus_tag=AD12_RS13865;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_001498609.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 124409 125014 . - . ID=gene-AD12_RS13860;Name=AD12_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13860;old_locus_tag=AD12_1824 NZ_JJLK01000063.1 Protein Homology CDS 124409 125014 . - 0 ID=cds-WP_000589355.1;Parent=gene-AD12_RS13860;Dbxref=GenBank:WP_000589355.1;Name=WP_000589355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1;locus_tag=AD12_RS13860;product=hypothetical protein;protein_id=WP_000589355.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 125017 125784 . - . ID=gene-AD12_RS13855;Name=AD12_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13855;old_locus_tag=AD12_1825 NZ_JJLK01000063.1 Protein Homology CDS 125017 125784 . - 0 ID=cds-WP_001183147.1;Parent=gene-AD12_RS13855;Dbxref=GenBank:WP_001183147.1;Name=WP_001183147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1;locus_tag=AD12_RS13855;product=hypothetical protein;protein_id=WP_001183147.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 125787 126497 . - . ID=gene-AD12_RS13850;Name=AD12_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13850;old_locus_tag=AD12_1826 NZ_JJLK01000063.1 Protein Homology CDS 125787 126497 . - 0 ID=cds-WP_000424560.1;Parent=gene-AD12_RS13850;Dbxref=GenBank:WP_000424560.1;Name=WP_000424560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=AD12_RS13850;product=hypothetical protein;protein_id=WP_000424560.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 126512 128020 . - . ID=gene-AD12_RS13845;Name=AD12_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13845;old_locus_tag=AD12_1827 NZ_JJLK01000063.1 Protein Homology CDS 126512 128020 . - 0 ID=cds-WP_122633146.1;Parent=gene-AD12_RS13845;Dbxref=GenBank:WP_122633146.1;Name=WP_122633146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349717.1;locus_tag=AD12_RS13845;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_122633146.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 128145 130592 . - . ID=gene-AD12_RS13840;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AD12_RS13840;old_locus_tag=AD12_1828 NZ_JJLK01000063.1 Protein Homology CDS 128145 130592 . - 0 ID=cds-WP_032236471.1;Parent=gene-AD12_RS13840;Dbxref=GenBank:WP_032236471.1;Name=WP_032236471.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AD12_RS13840;product=glycogen phosphorylase;protein_id=WP_032236471.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 130611 132044 . - . ID=gene-AD12_RS13835;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AD12_RS13835;old_locus_tag=AD12_1829 NZ_JJLK01000063.1 Protein Homology CDS 130611 132044 . - 0 ID=cds-WP_001197646.1;Parent=gene-AD12_RS13835;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AD12_RS13835;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 132044 133339 . - . ID=gene-AD12_RS13830;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AD12_RS13830;old_locus_tag=AD12_1830 NZ_JJLK01000063.1 Protein Homology CDS 132044 133339 . - 0 ID=cds-WP_000253975.1;Parent=gene-AD12_RS13830;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AD12_RS13830;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 133357 135330 . - . ID=gene-AD12_RS13825;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AD12_RS13825;old_locus_tag=AD12_1831 NZ_JJLK01000063.1 Protein Homology CDS 133357 135330 . - 0 ID=cds-WP_000192552.1;Parent=gene-AD12_RS13825;Dbxref=GenBank:WP_000192552.1;Name=WP_000192552.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AD12_RS13825;product=glycogen debranching protein GlgX;protein_id=WP_000192552.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 135327 137513 . - . ID=gene-AD12_RS13820;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AD12_RS13820;old_locus_tag=AD12_1832 NZ_JJLK01000063.1 Protein Homology CDS 135327 137513 . - 0 ID=cds-WP_001283723.1;Parent=gene-AD12_RS13820;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AD12_RS13820;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 137786 138889 . - . ID=gene-AD12_RS13815;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD12_RS13815;old_locus_tag=AD12_1833 NZ_JJLK01000063.1 Protein Homology CDS 137786 138889 . - 0 ID=cds-WP_000799956.1;Parent=gene-AD12_RS13815;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AD12_RS13815;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 139082 139675 . + . ID=gene-AD12_RS13810;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AD12_RS13810;old_locus_tag=AD12_1834 NZ_JJLK01000063.1 Protein Homology CDS 139082 139675 . + 0 ID=cds-WP_001002544.1;Parent=gene-AD12_RS13810;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AD12_RS13810;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 139732 141072 . - . ID=gene-AD12_RS13805;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AD12_RS13805;old_locus_tag=AD12_1835 NZ_JJLK01000063.1 Protein Homology CDS 139732 141072 . - 0 ID=cds-WP_000210097.1;Parent=gene-AD12_RS13805;Dbxref=GenBank:WP_000210097.1;Name=WP_000210097.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AD12_RS13805;product=gluconate transporter;protein_id=WP_000210097.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 141076 141603 . - . ID=gene-AD12_RS13800;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AD12_RS13800;old_locus_tag=AD12_1836 NZ_JJLK01000063.1 Protein Homology CDS 141076 141603 . - 0 ID=cds-WP_000108330.1;Parent=gene-AD12_RS13800;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AD12_RS13800;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 141742 142737 . - . ID=gene-AD12_RS13795;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AD12_RS13795;old_locus_tag=AD12_1837 NZ_JJLK01000063.1 Protein Homology CDS 141742 142737 . - 0 ID=cds-WP_001575312.1;Parent=gene-AD12_RS13795;Dbxref=GenBank:WP_001575312.1;Name=WP_001575312.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AD12_RS13795;product=gluconate operon transcriptional repressor GntR;protein_id=WP_001575312.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 142961 143656 . - . ID=gene-AD12_RS13790;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AD12_RS13790;old_locus_tag=AD12_1839 NZ_JJLK01000063.1 Protein Homology CDS 142961 143656 . - 0 ID=cds-WP_000639066.1;Parent=gene-AD12_RS13790;Dbxref=GenBank:WP_000639066.1;Name=WP_000639066.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AD12_RS13790;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639066.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 143779 144816 . - . ID=gene-AD12_RS13785;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AD12_RS13785;old_locus_tag=AD12_1840 NZ_JJLK01000063.1 Protein Homology CDS 143779 144816 . - 0 ID=cds-WP_032286457.1;Parent=gene-AD12_RS13785;Dbxref=GenBank:WP_032286457.1;Name=WP_032286457.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AD12_RS13785;product=oxidoreductase;protein_id=WP_032286457.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 145149 145637 . + . ID=gene-AD12_RS13780;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AD12_RS13780;old_locus_tag=AD12_1841 NZ_JJLK01000063.1 Protein Homology CDS 145149 145637 . + 0 ID=cds-WP_001356219.1;Parent=gene-AD12_RS13780;Dbxref=GenBank:WP_001356219.1;Name=WP_001356219.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AD12_RS13780;product=N-acetyltransferase;protein_id=WP_001356219.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 145747 146031 . + . ID=gene-AD12_RS13775;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AD12_RS13775;old_locus_tag=AD12_1842 NZ_JJLK01000063.1 Protein Homology CDS 145747 146031 . + 0 ID=cds-WP_000973807.1;Parent=gene-AD12_RS13775;Dbxref=GenBank:WP_000973807.1;Name=WP_000973807.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AD12_RS13775;product=YrhB family protein;protein_id=WP_000973807.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 146069 147802 . - . ID=gene-AD12_RS13770;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AD12_RS13770;old_locus_tag=AD12_1843 NZ_JJLK01000063.1 Protein Homology CDS 146069 147802 . - 0 ID=cds-WP_032179938.1;Parent=gene-AD12_RS13770;Dbxref=GenBank:WP_032179938.1;Name=WP_032179938.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AD12_RS13770;product=gamma-glutamyltransferase;protein_id=WP_032179938.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 147923 148363 . + . ID=gene-AD12_RS13765;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AD12_RS13765;old_locus_tag=AD12_1845 NZ_JJLK01000063.1 Protein Homology CDS 147923 148363 . + 0 ID=cds-WP_000825996.1;Parent=gene-AD12_RS13765;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AD12_RS13765;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 148350 149093 . - . ID=gene-AD12_RS13760;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AD12_RS13760;old_locus_tag=AD12_1846 NZ_JJLK01000063.1 Protein Homology CDS 148350 149093 . - 0 ID=cds-WP_032286459.1;Parent=gene-AD12_RS13760;Dbxref=GenBank:WP_032286459.1;Name=WP_032286459.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709219.1;locus_tag=AD12_RS13760;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032286459.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 149090 150160 . - . ID=gene-AD12_RS13755;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AD12_RS13755;old_locus_tag=AD12_1847 NZ_JJLK01000063.1 Protein Homology CDS 149090 150160 . - 0 ID=cds-WP_032286460.1;Parent=gene-AD12_RS13755;Dbxref=GenBank:WP_032286460.1;Name=WP_032286460.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AD12_RS13755;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_032286460.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 150162 151007 . - . ID=gene-AD12_RS13750;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AD12_RS13750;old_locus_tag=AD12_1848 NZ_JJLK01000063.1 Protein Homology CDS 150162 151007 . - 0 ID=cds-WP_000572176.1;Parent=gene-AD12_RS13750;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AD12_RS13750;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 151004 151891 . - . ID=gene-AD12_RS13745;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AD12_RS13745;old_locus_tag=AD12_1849 NZ_JJLK01000063.1 Protein Homology CDS 151004 151891 . - 0 ID=cds-WP_000099272.1;Parent=gene-AD12_RS13745;Dbxref=GenBank:WP_000099272.1;Name=WP_000099272.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AD12_RS13745;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099272.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 151989 153305 . - . ID=gene-AD12_RS13740;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AD12_RS13740;old_locus_tag=AD12_1850 NZ_JJLK01000063.1 Protein Homology CDS 151989 153305 . - 0 ID=cds-WP_000803204.1;Parent=gene-AD12_RS13740;Dbxref=GenBank:WP_000803204.1;Name=WP_000803204.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AD12_RS13740;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803204.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 153702 154415 . - . ID=gene-AD12_RS13735;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AD12_RS13735;old_locus_tag=AD12_1851 NZ_JJLK01000063.1 Protein Homology CDS 153702 154415 . - 0 ID=cds-WP_000416895.1;Parent=gene-AD12_RS13735;Dbxref=GenBank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AD12_RS13735;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 154417 155184 . - . ID=gene-AD12_RS13730;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AD12_RS13730;old_locus_tag=AD12_1852 NZ_JJLK01000063.1 Protein Homology CDS 154417 155184 . - 0 ID=cds-WP_032286461.1;Parent=gene-AD12_RS13730;Dbxref=GenBank:WP_032286461.1;Name=WP_032286461.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AD12_RS13730;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_032286461.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 155181 156458 . - . ID=gene-AD12_RS13725;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AD12_RS13725;old_locus_tag=AD12_1853 NZ_JJLK01000063.1 Protein Homology CDS 155181 156458 . - 0 ID=cds-WP_000803799.1;Parent=gene-AD12_RS13725;Dbxref=GenBank:WP_000803799.1;Name=WP_000803799.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AD12_RS13725;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803799.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 156455 157381 . - . ID=gene-AD12_RS13720;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AD12_RS13720;old_locus_tag=AD12_1854 NZ_JJLK01000063.1 Protein Homology CDS 156455 157381 . - 0 ID=cds-WP_000003004.1;Parent=gene-AD12_RS13720;Dbxref=GenBank:WP_000003004.1;Name=WP_000003004.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AD12_RS13720;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003004.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 157429 158538 . - . ID=gene-AD12_RS13715;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AD12_RS13715;old_locus_tag=AD12_1855 NZ_JJLK01000063.1 Protein Homology CDS 157429 158538 . - 0 ID=cds-WP_000827696.1;Parent=gene-AD12_RS13715;Dbxref=GenBank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AD12_RS13715;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 158962 159345 . + . ID=gene-AD12_RS13710;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AD12_RS13710;old_locus_tag=AD12_1857 NZ_JJLK01000063.1 Protein Homology CDS 158962 159345 . + 0 ID=cds-WP_000778781.1;Parent=gene-AD12_RS13710;Dbxref=GenBank:WP_000778781.1;Name=WP_000778781.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AD12_RS13710;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778781.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 159342 159869 . - . ID=gene-AD12_RS13705;Name=ataT;gbkey=Gene;gene=ataT;gene_biotype=protein_coding;locus_tag=AD12_RS13705;old_locus_tag=AD12_1858 NZ_JJLK01000063.1 Protein Homology CDS 159342 159869 . - 0 ID=cds-WP_000342449.1;Parent=gene-AD12_RS13705;Dbxref=GenBank:WP_000342449.1;Name=WP_000342449.1;gbkey=CDS;gene=ataT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312334.1;locus_tag=AD12_RS13705;product=type II toxin-antitoxin system toxin acetyltransferase AtaT;protein_id=WP_000342449.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 159876 160142 . - . ID=gene-AD12_RS13700;Name=ataR;gbkey=Gene;gene=ataR;gene_biotype=protein_coding;locus_tag=AD12_RS13700;old_locus_tag=AD12_1859 NZ_JJLK01000063.1 Protein Homology CDS 159876 160142 . - 0 ID=cds-WP_001478481.1;Parent=gene-AD12_RS13700;Dbxref=GenBank:WP_001478481.1;Name=WP_001478481.1;gbkey=CDS;gene=ataR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312335.1;locus_tag=AD12_RS13700;product=type II toxin-antitoxin system antitoxin AtaR;protein_id=WP_001478481.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 160292 161395 . - . ID=gene-AD12_RS13695;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AD12_RS13695;old_locus_tag=AD12_1860 NZ_JJLK01000063.1 Protein Homology CDS 160292 161395 . - 0 ID=cds-WP_001350438.1;Parent=gene-AD12_RS13695;Dbxref=GenBank:WP_001350438.1;Name=WP_001350438.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AD12_RS13695;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001350438.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 161667 162521 . - . ID=gene-AD12_RS13690;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AD12_RS13690;old_locus_tag=AD12_1861 NZ_JJLK01000063.1 Protein Homology CDS 161667 162521 . - 0 ID=cds-WP_000130217.1;Parent=gene-AD12_RS13690;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AD12_RS13690;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 162766 163824 . - . ID=gene-AD12_RS13685;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AD12_RS13685;old_locus_tag=AD12_1862 NZ_JJLK01000063.1 Protein Homology CDS 162766 163824 . - 0 ID=cds-WP_001042003.1;Parent=gene-AD12_RS13685;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AD12_RS13685;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 163817 164485 . - . ID=gene-AD12_RS13680;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AD12_RS13680;old_locus_tag=AD12_1863 NZ_JJLK01000063.1 Protein Homology CDS 163817 164485 . - 0 ID=cds-WP_000617723.1;Parent=gene-AD12_RS13680;Dbxref=GenBank:WP_000617723.1;Name=WP_000617723.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AD12_RS13680;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 164488 165981 . - . ID=gene-AD12_RS13675;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AD12_RS13675;old_locus_tag=AD12_1864 NZ_JJLK01000063.1 Protein Homology CDS 164488 165981 . - 0 ID=cds-WP_001040659.1;Parent=gene-AD12_RS13675;Dbxref=GenBank:WP_001040659.1;Name=WP_001040659.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AD12_RS13675;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040659.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 166131 166727 . + . ID=gene-AD12_RS13670;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AD12_RS13670;old_locus_tag=AD12_1865 NZ_JJLK01000063.1 Protein Homology CDS 166131 166727 . + 0 ID=cds-WP_000743193.1;Parent=gene-AD12_RS13670;Dbxref=GenBank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AD12_RS13670;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 166717 166986 . + . ID=gene-AD12_RS13665;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AD12_RS13665;old_locus_tag=AD12_1866 NZ_JJLK01000063.1 Protein Homology CDS 166717 166986 . + 0 ID=cds-WP_001295207.1;Parent=gene-AD12_RS13665;Dbxref=GenBank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AD12_RS13665;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 166989 167348 . - . ID=gene-AD12_RS13660;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AD12_RS13660;old_locus_tag=AD12_1867 NZ_JJLK01000063.1 Protein Homology CDS 166989 167348 . - 0 ID=cds-WP_000042900.1;Parent=gene-AD12_RS13660;Dbxref=GenBank:WP_000042900.1;Name=WP_000042900.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709237.1;locus_tag=AD12_RS13660;product=DUF2500 domain-containing protein;protein_id=WP_000042900.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 167489 168115 . + . ID=gene-AD12_RS13655;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AD12_RS13655;old_locus_tag=AD12_1868 NZ_JJLK01000063.1 Protein Homology CDS 167489 168115 . + 0 ID=cds-WP_000964718.1;Parent=gene-AD12_RS13655;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AD12_RS13655;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 168189 170387 . + . ID=gene-AD12_RS13650;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AD12_RS13650;old_locus_tag=AD12_1869 NZ_JJLK01000063.1 Protein Homology CDS 168189 170387 . + 0 ID=cds-WP_000106527.1;Parent=gene-AD12_RS13650;Dbxref=GenBank:WP_000106527.1;Name=WP_000106527.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=AD12_RS13650;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106527.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 170493 170738 . - . ID=gene-AD12_RS13645;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AD12_RS13645;old_locus_tag=AD12_1870 NZ_JJLK01000063.1 Protein Homology CDS 170493 170738 . - 0 ID=cds-WP_000130621.1;Parent=gene-AD12_RS13645;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AD12_RS13645;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 170959 171624 . + . ID=gene-AD12_RS13640;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AD12_RS13640;old_locus_tag=AD12_1871 NZ_JJLK01000063.1 Protein Homology CDS 170959 171624 . + 0 ID=cds-WP_032286462.1;Parent=gene-AD12_RS13640;Dbxref=GenBank:WP_032286462.1;Name=WP_032286462.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312347.1;locus_tag=AD12_RS13640;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_032286462.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 171697 172254 . + . ID=gene-AD12_RS13635;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AD12_RS13635;old_locus_tag=AD12_1872 NZ_JJLK01000063.1 Protein Homology CDS 171697 172254 . + 0 ID=cds-WP_001245295.1;Parent=gene-AD12_RS13635;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AD12_RS13635;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 172258 173475 . - . ID=gene-AD12_RS13630;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AD12_RS13630;old_locus_tag=AD12_1873 NZ_JJLK01000063.1 Protein Homology CDS 172258 173475 . - 0 ID=cds-WP_001298709.1;Parent=gene-AD12_RS13630;Dbxref=GenBank:WP_001298709.1;Name=WP_001298709.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AD12_RS13630;product=MFS transporter;protein_id=WP_001298709.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 173607 174656 . + . ID=gene-AD12_RS13625;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AD12_RS13625;old_locus_tag=AD12_1874 NZ_JJLK01000063.1 Protein Homology CDS 173607 174656 . + 0 ID=cds-WP_032286463.1;Parent=gene-AD12_RS13625;Dbxref=GenBank:WP_032286463.1;Name=WP_032286463.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AD12_RS13625;product=AI-2E family transporter;protein_id=WP_032286463.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 174711 175298 . + . ID=gene-AD12_RS13620;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AD12_RS13620;old_locus_tag=AD12_1875 NZ_JJLK01000063.1 Protein Homology CDS 174711 175298 . + 0 ID=cds-WP_000285784.1;Parent=gene-AD12_RS13620;Dbxref=GenBank:WP_000285784.1;Name=WP_000285784.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=AD12_RS13620;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285784.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 175409 176983 . + . ID=gene-AD12_RS13615;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AD12_RS13615;old_locus_tag=AD12_1876 NZ_JJLK01000063.1 Protein Homology CDS 175409 176983 . + 0 ID=cds-WP_000953356.1;Parent=gene-AD12_RS13615;Dbxref=GenBank:WP_000953356.1;Name=WP_000953356.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709246.1;locus_tag=AD12_RS13615;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953356.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 176983 177927 . + . ID=gene-AD12_RS13610;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AD12_RS13610;old_locus_tag=AD12_1877 NZ_JJLK01000063.1 Protein Homology CDS 176983 177927 . + 0 ID=cds-WP_000947068.1;Parent=gene-AD12_RS13610;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AD12_RS13610;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 177924 178757 . + . ID=gene-AD12_RS13605;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AD12_RS13605;old_locus_tag=AD12_1878 NZ_JJLK01000063.1 Protein Homology CDS 177924 178757 . + 0 ID=cds-WP_001008963.1;Parent=gene-AD12_RS13605;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AD12_RS13605;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 178757 179521 . + . ID=gene-AD12_RS13600;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AD12_RS13600;old_locus_tag=AD12_1879 NZ_JJLK01000063.1 Protein Homology CDS 178757 179521 . + 0 ID=cds-WP_001136236.1;Parent=gene-AD12_RS13600;Dbxref=GenBank:WP_001136236.1;Name=WP_001136236.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AD12_RS13600;product=nickel import ATP-binding protein NikD;protein_id=WP_001136236.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 179518 180324 . + . ID=gene-AD12_RS13595;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AD12_RS13595;old_locus_tag=AD12_1880 NZ_JJLK01000063.1 Protein Homology CDS 179518 180324 . + 0 ID=cds-WP_000173666.1;Parent=gene-AD12_RS13595;Dbxref=GenBank:WP_000173666.1;Name=WP_000173666.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AD12_RS13595;product=nickel import ATP-binding protein NikE;protein_id=WP_000173666.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 180330 180731 . + . ID=gene-AD12_RS13590;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AD12_RS13590;old_locus_tag=AD12_1881 NZ_JJLK01000063.1 Protein Homology CDS 180330 180731 . + 0 ID=cds-WP_001190062.1;Parent=gene-AD12_RS13590;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AD12_RS13590;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 180851 181210 . - . ID=gene-AD12_RS13585;Name=AD12_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13585;old_locus_tag=AD12_1882 NZ_JJLK01000063.1 Protein Homology CDS 180851 181210 . - 0 ID=cds-WP_000593555.1;Parent=gene-AD12_RS13585;Dbxref=GenBank:WP_000593555.1;Name=WP_000593555.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312383.1;locus_tag=AD12_RS13585;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_000593555.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 181207 181437 . - . ID=gene-AD12_RS0123860;Name=AD12_RS0123860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123860 NZ_JJLK01000063.1 Protein Homology CDS 181207 181437 . - 0 ID=cds-WP_042014162.1;Parent=gene-AD12_RS0123860;Dbxref=GenBank:WP_042014162.1;Name=WP_042014162.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989200.1;locus_tag=AD12_RS0123860;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_042014162.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 181541 182665 . - . ID=gene-AD12_RS13580;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AD12_RS13580;old_locus_tag=AD12_1883 NZ_JJLK01000063.1 Protein Homology CDS 181541 182665 . - 0 ID=cds-WP_001314210.1;Parent=gene-AD12_RS13580;Dbxref=GenBank:WP_001314210.1;Name=WP_001314210.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AD12_RS13580;product=ABC transporter permease;protein_id=WP_001314210.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 182665 185400 . - . ID=gene-AD12_RS13575;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AD12_RS13575;old_locus_tag=AD12_1884 NZ_JJLK01000063.1 Protein Homology CDS 182665 185400 . - 0 ID=cds-WP_000149132.1;Parent=gene-AD12_RS13575;Dbxref=GenBank:WP_000149132.1;Name=WP_000149132.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=AD12_RS13575;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149132.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 185397 186464 . - . ID=gene-AD12_RS13570;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AD12_RS13570;old_locus_tag=AD12_1885 NZ_JJLK01000063.1 Protein Homology CDS 185397 186464 . - 0 ID=cds-WP_000361485.1;Parent=gene-AD12_RS13570;Dbxref=GenBank:WP_000361485.1;Name=WP_000361485.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AD12_RS13570;product=HlyD family secretion protein;protein_id=WP_000361485.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 186527 186640 . - . ID=gene-AD12_RS29265;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AD12_RS29265;old_locus_tag=AD12_1886 NZ_JJLK01000063.1 Protein Homology CDS 186527 186640 . - 0 ID=cds-WP_001296785.1;Parent=gene-AD12_RS29265;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AD12_RS29265;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 186830 188452 . - . ID=gene-AD12_RS13565;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AD12_RS13565;old_locus_tag=AD12_1887 NZ_JJLK01000063.1 Protein Homology CDS 186830 188452 . - 0 ID=cds-WP_001307442.1;Parent=gene-AD12_RS13565;Dbxref=GenBank:WP_001307442.1;Name=WP_001307442.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AD12_RS13565;product=DUF4049 domain-containing protein;protein_id=WP_001307442.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 188714 190303 . - . ID=gene-AD12_RS13560;Name=AD12_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13560;old_locus_tag=AD12_1888 NZ_JJLK01000063.1 Protein Homology CDS 188714 190303 . - 0 ID=cds-WP_000862320.1;Parent=gene-AD12_RS13560;Dbxref=GenBank:WP_000862320.1;Name=WP_000862320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312389.1;locus_tag=AD12_RS13560;product=DUF4049 domain-containing protein;protein_id=WP_000862320.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 190687 191739 . + . ID=gene-AD12_RS13555;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AD12_RS13555;old_locus_tag=AD12_1890 NZ_JJLK01000063.1 Protein Homology CDS 190687 191739 . + 0 ID=cds-WP_001028905.1;Parent=gene-AD12_RS13555;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AD12_RS13555;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 192054 193256 . - . ID=gene-AD12_RS13550;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AD12_RS13550;old_locus_tag=AD12_1891 NZ_JJLK01000063.1 Protein Homology CDS 192054 193256 . - 0 ID=cds-WP_000439180.1;Parent=gene-AD12_RS13550;Dbxref=GenBank:WP_000439180.1;Name=WP_000439180.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AD12_RS13550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439180.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 193488 194987 . + . ID=gene-AD12_RS13545;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AD12_RS13545;old_locus_tag=AD12_1892 NZ_JJLK01000063.1 Protein Homology CDS 193488 194987 . + 0 ID=cds-WP_001397239.1;Parent=gene-AD12_RS13545;Dbxref=GenBank:WP_001397239.1;Name=WP_001397239.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AD12_RS13545;product=inorganic phosphate transporter PitA;protein_id=WP_001397239.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 195058 195393 . - . ID=gene-AD12_RS0123875;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AD12_RS0123875;old_locus_tag=AD12_1893 NZ_JJLK01000063.1 Protein Homology CDS 195058 195393 . - 0 ID=cds-WP_000626187.1;Parent=gene-AD12_RS0123875;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AD12_RS0123875;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 195784 196218 . + . ID=gene-AD12_RS0123880;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AD12_RS0123880 NZ_JJLK01000063.1 Protein Homology CDS 195784 196218 . + 0 ID=cds-WP_000323571.1;Parent=gene-AD12_RS0123880;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AD12_RS0123880;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 196317 196370 . - . ID=gene-AD12_RS29270;Name=AD12_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29270 NZ_JJLK01000063.1 Protein Homology CDS 196317 196370 . - 0 ID=cds-WP_212591402.1;Parent=gene-AD12_RS29270;Dbxref=GenBank:WP_212591402.1;Name=WP_212591402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AD12_RS29270;product=hypothetical protein;protein_id=WP_212591402.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 196536 198005 . + . ID=gene-AD12_RS13540;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AD12_RS13540;old_locus_tag=AD12_1895 NZ_JJLK01000063.1 Protein Homology CDS 196536 198005 . + 0 ID=cds-WP_001098647.1;Parent=gene-AD12_RS13540;Dbxref=GenBank:WP_001098647.1;Name=WP_001098647.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AD12_RS13540;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098647.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 198054 198806 . - . ID=gene-AD12_RS13535;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AD12_RS13535;old_locus_tag=AD12_1896 NZ_JJLK01000063.1 Protein Homology CDS 198054 198806 . - 0 ID=cds-WP_000686608.1;Parent=gene-AD12_RS13535;Dbxref=GenBank:WP_000686608.1;Name=WP_000686608.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709277.2;locus_tag=AD12_RS13535;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686608.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 198814 200856 . - . ID=gene-AD12_RS13530;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AD12_RS13530;old_locus_tag=AD12_1897 NZ_JJLK01000063.1 Protein Homology CDS 198814 200856 . - 0 ID=cds-WP_001295214.1;Parent=gene-AD12_RS13530;Dbxref=GenBank:WP_001295214.1;Name=WP_001295214.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=AD12_RS13530;product=oligopeptidase A;protein_id=WP_001295214.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 201059 201901 . + . ID=gene-AD12_RS13525;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AD12_RS13525;old_locus_tag=AD12_1898 NZ_JJLK01000063.1 Protein Homology CDS 201059 201901 . + 0 ID=cds-WP_000954225.1;Parent=gene-AD12_RS13525;Dbxref=GenBank:WP_000954225.1;Name=WP_000954225.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=AD12_RS13525;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_000954225.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 201973 203325 . + . ID=gene-AD12_RS13520;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AD12_RS13520;old_locus_tag=AD12_1899 NZ_JJLK01000063.1 Protein Homology CDS 201973 203325 . + 0 ID=cds-WP_000160808.1;Parent=gene-AD12_RS13520;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AD12_RS13520;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 203379 203462 . - . ID=gene-AD12_RS0123885;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AD12_RS0123885 NZ_JJLK01000063.1 Protein Homology CDS 203379 203462 . - 0 ID=cds-WP_001295215.1;Parent=gene-AD12_RS0123885;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AD12_RS0123885;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 203490 203663 . + . ID=gene-AD12_RS29040;Name=AD12_RS29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29040;old_locus_tag=AD12_1901 NZ_JJLK01000063.1 GeneMarkS-2+ CDS 203490 203663 . + 0 ID=cds-WP_001296816.1;Parent=gene-AD12_RS29040;Dbxref=GenBank:WP_001296816.1;Name=WP_001296816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29040;product=hypothetical protein;protein_id=WP_001296816.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 204202 204555 . + . ID=gene-AD12_RS13510;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AD12_RS13510;old_locus_tag=AD12_1902 NZ_JJLK01000063.1 Protein Homology CDS 204202 204555 . + 0 ID=cds-WP_000008957.1;Parent=gene-AD12_RS13510;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AD12_RS13510;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 204609 205898 . + . ID=gene-AD12_RS13505;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AD12_RS13505;old_locus_tag=AD12_1903 NZ_JJLK01000063.1 Protein Homology CDS 204609 205898 . + 0 ID=cds-WP_001324556.1;Parent=gene-AD12_RS13505;Dbxref=GenBank:WP_001324556.1;Name=WP_001324556.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AD12_RS13505;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_001324556.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 205911 206336 . + . ID=gene-AD12_RS13500;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD12_RS13500;old_locus_tag=AD12_1904 NZ_JJLK01000063.1 Protein Homology CDS 205911 206336 . + 0 ID=cds-WP_000065777.1;Parent=gene-AD12_RS13500;Dbxref=GenBank:WP_000065777.1;Name=WP_000065777.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AD12_RS13500;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065777.1;transl_table=11 NZ_JJLK01000063.1 RefSeq pseudogene 206961 208076 . + . ID=gene-AD12_RS0123890;Name=AD12_RS0123890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123890;old_locus_tag=AD12_1905;pseudo=true NZ_JJLK01000063.1 Protein Homology CDS 206961 208076 . + 0 ID=cds-AD12_RS0123890;Parent=gene-AD12_RS0123890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AD12_RS0123890;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 208431 208997 . + . ID=gene-AD12_RS13495;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AD12_RS13495;old_locus_tag=AD12_1906 NZ_JJLK01000063.1 Protein Homology CDS 208431 208997 . + 0 ID=cds-WP_001057453.1;Parent=gene-AD12_RS13495;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AD12_RS13495;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 209153 209683 . + . ID=gene-AD12_RS13490;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AD12_RS13490;old_locus_tag=AD12_1907 NZ_JJLK01000063.1 Protein Homology CDS 209153 209683 . + 0 ID=cds-WP_000478621.1;Parent=gene-AD12_RS13490;Dbxref=GenBank:WP_000478621.1;Name=WP_000478621.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312405.1;locus_tag=AD12_RS13490;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478621.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 209725 210372 . - . ID=gene-AD12_RS13485;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AD12_RS13485;old_locus_tag=AD12_1908 NZ_JJLK01000063.1 Protein Homology CDS 209725 210372 . - 0 ID=cds-WP_001384526.1;Parent=gene-AD12_RS13485;Dbxref=GenBank:WP_001384526.1;Name=WP_001384526.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AD12_RS13485;product=MgtC/SapB family protein;protein_id=WP_001384526.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 210436 210762 . - . ID=gene-AD12_RS13480;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AD12_RS13480;old_locus_tag=AD12_1909 NZ_JJLK01000063.1 Protein Homology CDS 210436 210762 . - 0 ID=cds-WP_001298717.1;Parent=gene-AD12_RS13480;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AD12_RS13480;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 210878 211210 . - . ID=gene-AD12_RS13475;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AD12_RS13475;old_locus_tag=AD12_1910 NZ_JJLK01000063.1 Protein Homology CDS 210878 211210 . - 0 ID=cds-WP_000756550.1;Parent=gene-AD12_RS13475;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AD12_RS13475;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 211465 212037 . + . ID=gene-AD12_RS13470;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AD12_RS13470;old_locus_tag=AD12_1911 NZ_JJLK01000063.1 Protein Homology CDS 211465 212037 . + 0 ID=cds-WP_000965672.1;Parent=gene-AD12_RS13470;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AD12_RS13470;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 212836 213363 . + . ID=gene-AD12_RS13465;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AD12_RS13465;old_locus_tag=AD12_1912 NZ_JJLK01000063.1 Protein Homology CDS 212836 213363 . + 0 ID=cds-WP_000576690.1;Parent=gene-AD12_RS13465;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AD12_RS13465;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 213364 213642 . - . ID=gene-AD12_RS0123895;Name=AD12_RS0123895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123895 NZ_JJLK01000063.1 Protein Homology CDS 213364 213642 . - 0 ID=cds-WP_001205333.1;Parent=gene-AD12_RS0123895;Dbxref=GenBank:WP_001205333.1;Name=WP_001205333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AD12_RS0123895;product=hypothetical protein;protein_id=WP_001205333.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 213750 214859 . + . ID=gene-AD12_RS13460;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AD12_RS13460;old_locus_tag=AD12_1913 NZ_JJLK01000063.1 Protein Homology CDS 213750 214859 . + 0 ID=cds-WP_001340474.1;Parent=gene-AD12_RS13460;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AD12_RS13460;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 214884 217997 . + . ID=gene-AD12_RS13455;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AD12_RS13455;old_locus_tag=AD12_1914 NZ_JJLK01000063.1 Protein Homology CDS 214884 217997 . + 0 ID=cds-WP_000024889.1;Parent=gene-AD12_RS13455;Dbxref=GenBank:WP_000024889.1;Name=WP_000024889.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312421.1;locus_tag=AD12_RS13455;product=multidrug efflux pump RND permease MdtF;protein_id=WP_000024889.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 218360 219088 . - . ID=gene-AD12_RS13450;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AD12_RS13450;old_locus_tag=AD12_1915 NZ_JJLK01000063.1 Protein Homology CDS 218360 219088 . - 0 ID=cds-WP_032286464.1;Parent=gene-AD12_RS13450;Dbxref=GenBank:WP_032286464.1;Name=WP_032286464.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AD12_RS13450;product=acid resistance transcriptional activator GadW;protein_id=WP_032286464.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 219456 220280 . - . ID=gene-AD12_RS13445;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AD12_RS13445;old_locus_tag=AD12_1916 NZ_JJLK01000063.1 Protein Homology CDS 219456 220280 . - 0 ID=cds-WP_001191068.1;Parent=gene-AD12_RS13445;Dbxref=GenBank:WP_001191068.1;Name=WP_001191068.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709339.1;locus_tag=AD12_RS13445;product=acid resistance transcriptional activator GadX;protein_id=WP_001191068.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 220650 222050 . - . ID=gene-AD12_RS13440;Name=AD12_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13440;old_locus_tag=AD12_1917 NZ_JJLK01000063.1 Protein Homology CDS 220650 222050 . - 0 ID=cds-WP_000358849.1;Parent=gene-AD12_RS13440;Dbxref=GenBank:WP_000358849.1;Name=WP_000358849.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD12_RS13440;product=glutamate decarboxylase;protein_id=WP_000358849.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 222412 225195 . - . ID=gene-AD12_RS13435;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AD12_RS13435;old_locus_tag=AD12_1919 NZ_JJLK01000063.1 Protein Homology CDS 222412 225195 . - 0 ID=cds-WP_001244983.1;Parent=gene-AD12_RS13435;Dbxref=GenBank:WP_001244983.1;Name=WP_001244983.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AD12_RS13435;product=M16 family metallopeptidase;protein_id=WP_001244983.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 225252 227624 . - . ID=gene-AD12_RS13430;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AD12_RS13430;old_locus_tag=AD12_1920 NZ_JJLK01000063.1 Protein Homology CDS 225252 227624 . - 0 ID=cds-WP_001587034.1;Parent=gene-AD12_RS13430;Dbxref=GenBank:WP_001587034.1;Name=WP_001587034.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AD12_RS13430;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_001587034.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 227662 229347 . - . ID=gene-AD12_RS13425;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AD12_RS13425;old_locus_tag=AD12_1921 NZ_JJLK01000063.1 Protein Homology CDS 227662 229347 . - 0 ID=cds-WP_032286465.1;Parent=gene-AD12_RS13425;Dbxref=GenBank:WP_032286465.1;Name=WP_032286465.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AD12_RS13425;product=ABC transporter ATP-binding protein/permease;protein_id=WP_032286465.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 229550 229672 . + . ID=gene-AD12_RS28685;Name=AD12_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28685 NZ_JJLK01000063.1 Protein Homology CDS 229550 229672 . + 0 ID=cds-WP_122633168.1;Parent=gene-AD12_RS28685;Dbxref=GenBank:WP_122633168.1;Name=WP_122633168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AD12_RS28685;product=hypothetical protein;protein_id=WP_122633168.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 229638 230795 . - . ID=gene-AD12_RS13420;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AD12_RS13420;old_locus_tag=AD12_1922 NZ_JJLK01000063.1 Protein Homology CDS 229638 230795 . - 0 ID=cds-WP_032286466.1;Parent=gene-AD12_RS13420;Dbxref=GenBank:WP_032286466.1;Name=WP_032286466.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AD12_RS13420;product=anaerobic sulfatase maturase;protein_id=WP_032286466.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 230847 232529 . - . ID=gene-AD12_RS13415;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AD12_RS13415;old_locus_tag=AD12_1923 NZ_JJLK01000063.1 Protein Homology CDS 230847 232529 . - 0 ID=cds-WP_032286468.1;Parent=gene-AD12_RS13415;Dbxref=GenBank:WP_032286468.1;Name=WP_032286468.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AD12_RS13415;product=sulfatase-like hydrolase/transferase;protein_id=WP_032286468.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 232931 233692 . - . ID=gene-AD12_RS13410;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AD12_RS13410;old_locus_tag=AD12_1924 NZ_JJLK01000063.1 Protein Homology CDS 232931 233692 . - 0 ID=cds-WP_032286470.1;Parent=gene-AD12_RS13410;Dbxref=GenBank:WP_032286470.1;Name=WP_032286470.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707419.1;locus_tag=AD12_RS13410;product=acid stress response transcriptional regulator YdeO;protein_id=WP_032286470.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 233767 233964 . - . ID=gene-AD12_RS13405;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AD12_RS13405;old_locus_tag=AD12_1925 NZ_JJLK01000063.1 Protein Homology CDS 233767 233964 . - 0 ID=cds-WP_000543389.1;Parent=gene-AD12_RS13405;Dbxref=GenBank:WP_000543389.1;Name=WP_000543389.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AD12_RS13405;product=two-component system connector SafA;protein_id=WP_000543389.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 234212 236491 . - . ID=gene-AD12_RS13400;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AD12_RS13400;old_locus_tag=AD12_1926 NZ_JJLK01000063.1 Protein Homology CDS 234212 236491 . - 0 ID=cds-WP_000726689.1;Parent=gene-AD12_RS13400;Dbxref=GenBank:WP_000726689.1;Name=WP_000726689.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AD12_RS13400;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726689.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 236825 237739 . - . ID=gene-AD12_RS13395;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=AD12_RS13395;old_locus_tag=AD12_1927 NZ_JJLK01000063.1 Protein Homology CDS 236825 237739 . - 0 ID=cds-WP_000520679.1;Parent=gene-AD12_RS13395;Dbxref=GenBank:WP_000520679.1;Name=WP_000520679.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310134.1;locus_tag=AD12_RS13395;product=fimbrial protein;protein_id=WP_000520679.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 237799 238302 . - . ID=gene-AD12_RS13390;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AD12_RS13390;old_locus_tag=AD12_1928 NZ_JJLK01000063.1 Protein Homology CDS 237799 238302 . - 0 ID=cds-WP_000825458.1;Parent=gene-AD12_RS13390;Dbxref=GenBank:WP_000825458.1;Name=WP_000825458.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=AD12_RS13390;product=fimbrial protein;protein_id=WP_000825458.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 238315 238845 . - . ID=gene-AD12_RS13385;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=AD12_RS13385;old_locus_tag=AD12_1929 NZ_JJLK01000063.1 Protein Homology CDS 238315 238845 . - 0 ID=cds-WP_000876784.1;Parent=gene-AD12_RS13385;Dbxref=GenBank:WP_000876784.1;Name=WP_000876784.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310136.1;locus_tag=AD12_RS13385;product=fimbrial protein;protein_id=WP_000876784.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 238859 241510 . - . ID=gene-AD12_RS13380;Name=AD12_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13380;old_locus_tag=AD12_1930 NZ_JJLK01000063.1 Protein Homology CDS 238859 241510 . - 0 ID=cds-WP_000125354.1;Parent=gene-AD12_RS13380;Dbxref=GenBank:WP_000125354.1;Name=WP_000125354.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AD12_RS13380;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000125354.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 241552 242262 . - . ID=gene-AD12_RS13375;Name=AD12_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13375;old_locus_tag=AD12_1931 NZ_JJLK01000063.1 Protein Homology CDS 241552 242262 . - 0 ID=cds-WP_001195166.1;Parent=gene-AD12_RS13375;Dbxref=GenBank:WP_001195166.1;Name=WP_001195166.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310139.1;locus_tag=AD12_RS13375;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001195166.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 242623 243186 . - . ID=gene-AD12_RS13370;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AD12_RS13370;old_locus_tag=AD12_1932 NZ_JJLK01000063.1 Protein Homology CDS 242623 243186 . - 0 ID=cds-WP_001296758.1;Parent=gene-AD12_RS13370;Dbxref=GenBank:WP_001296758.1;Name=WP_001296758.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310140.1;locus_tag=AD12_RS13370;product=type 1 fimbrial major subunit FimA;protein_id=WP_001296758.1;transl_table=11 NZ_JJLK01000063.1 RefSeq pseudogene 243618 243826 . - . ID=gene-AD12_RS0123905;Name=AD12_RS0123905;end_range=243826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0123905;partial=true;pseudo=true NZ_JJLK01000063.1 Protein Homology CDS 243618 243826 . - 0 ID=cds-AD12_RS0123905;Parent=gene-AD12_RS0123905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=243826,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AD12_RS0123905;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 244139 245461 . - . ID=gene-AD12_RS13365;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AD12_RS13365;old_locus_tag=AD12_1933 NZ_JJLK01000063.1 Protein Homology CDS 244139 245461 . - 0 ID=cds-WP_001125463.1;Parent=gene-AD12_RS13365;Dbxref=GenBank:WP_001125463.1;Name=WP_001125463.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AD12_RS13365;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125463.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 245461 245727 . - . ID=gene-AD12_RS13360;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AD12_RS13360;old_locus_tag=AD12_1934 NZ_JJLK01000063.1 Protein Homology CDS 245461 245727 . - 0 ID=cds-WP_001296726.1;Parent=gene-AD12_RS13360;Dbxref=GenBank:WP_001296726.1;Name=WP_001296726.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AD12_RS13360;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001296726.1;transl_table=11 NZ_JJLK01000063.1 RefSeq pseudogene 245936 251357 . - . ID=gene-AD12_RS13350;Name=AD12_RS13350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS13350;old_locus_tag=AD12_1936;pseudo=true NZ_JJLK01000063.1 Protein Homology CDS 245936 251357 . - 0 ID=cds-AD12_RS13350;Parent=gene-AD12_RS13350;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AD12_RS13350;product=ECSE_1600 family autotransporter;pseudo=true;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 251888 253480 . - . ID=gene-AD12_RS13345;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AD12_RS13345;old_locus_tag=AD12_1937 NZ_JJLK01000063.1 Protein Homology CDS 251888 253480 . - 0 ID=cds-WP_000113127.1;Parent=gene-AD12_RS13345;Dbxref=GenBank:WP_000113127.1;Name=WP_000113127.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AD12_RS13345;product=autoinducer-2 kinase;protein_id=WP_000113127.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 253559 254512 . - . ID=gene-AD12_RS13340;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AD12_RS13340;old_locus_tag=AD12_1938 NZ_JJLK01000063.1 Protein Homology CDS 253559 254512 . - 0 ID=cds-WP_000154340.1;Parent=gene-AD12_RS13340;Dbxref=GenBank:WP_000154340.1;Name=WP_000154340.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707462.1;locus_tag=AD12_RS13340;product=transcriptional regulator LsrR;protein_id=WP_000154340.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 254761 256296 . + . ID=gene-AD12_RS13335;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AD12_RS13335;old_locus_tag=AD12_1939 NZ_JJLK01000063.1 Protein Homology CDS 254761 256296 . + 0 ID=cds-WP_001194882.1;Parent=gene-AD12_RS13335;Dbxref=GenBank:WP_001194882.1;Name=WP_001194882.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AD12_RS13335;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001194882.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 256290 257318 . + . ID=gene-AD12_RS13330;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AD12_RS13330;old_locus_tag=AD12_1940 NZ_JJLK01000063.1 Protein Homology CDS 256290 257318 . + 0 ID=cds-WP_000911143.1;Parent=gene-AD12_RS13330;Dbxref=GenBank:WP_000911143.1;Name=WP_000911143.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AD12_RS13330;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911143.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 257318 258310 . + . ID=gene-AD12_RS13325;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AD12_RS13325;old_locus_tag=AD12_1941 NZ_JJLK01000063.1 Protein Homology CDS 257318 258310 . + 0 ID=cds-WP_001222721.1;Parent=gene-AD12_RS13325;Dbxref=GenBank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AD12_RS13325;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 258322 259344 . + . ID=gene-AD12_RS13320;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AD12_RS13320;old_locus_tag=AD12_1942 NZ_JJLK01000063.1 Protein Homology CDS 258322 259344 . + 0 ID=cds-WP_000172466.1;Parent=gene-AD12_RS13320;Dbxref=GenBank:WP_000172466.1;Name=WP_000172466.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AD12_RS13320;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172466.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 259371 260246 . + . ID=gene-AD12_RS13315;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AD12_RS13315;old_locus_tag=AD12_1943 NZ_JJLK01000063.1 Protein Homology CDS 259371 260246 . + 0 ID=cds-WP_000774183.1;Parent=gene-AD12_RS13315;Dbxref=GenBank:WP_000774183.1;Name=WP_000774183.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AD12_RS13315;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774183.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 260270 260560 . + . ID=gene-AD12_RS13310;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AD12_RS13310;old_locus_tag=AD12_1944 NZ_JJLK01000063.1 Protein Homology CDS 260270 260560 . + 0 ID=cds-WP_000558527.1;Parent=gene-AD12_RS13310;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AD12_RS13310;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 260617 261375 . + . ID=gene-AD12_RS13305;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AD12_RS13305;old_locus_tag=AD12_1945 NZ_JJLK01000063.1 Protein Homology CDS 260617 261375 . + 0 ID=cds-WP_001286581.1;Parent=gene-AD12_RS13305;Dbxref=GenBank:WP_001286581.1;Name=WP_001286581.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AD12_RS13305;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286581.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 261379 262293 . - . ID=gene-AD12_RS13300;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AD12_RS13300;old_locus_tag=AD12_1946 NZ_JJLK01000063.1 Protein Homology CDS 261379 262293 . - 0 ID=cds-WP_000637082.1;Parent=gene-AD12_RS13300;Dbxref=GenBank:WP_000637082.1;Name=WP_000637082.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AD12_RS13300;product=bestrophin family protein;protein_id=WP_000637082.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 262500 263951 . - . ID=gene-AD12_RS13295;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AD12_RS13295;old_locus_tag=AD12_1947 NZ_JJLK01000063.1 Protein Homology CDS 262500 263951 . - 0 ID=cds-WP_000854624.1;Parent=gene-AD12_RS13295;Dbxref=GenBank:WP_000854624.1;Name=WP_000854624.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AD12_RS13295;product=tagaturonate reductase;protein_id=WP_000854624.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 264178 265596 . - . ID=gene-AD12_RS0123910;Name=AD12_RS0123910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123910;old_locus_tag=AD12_1949 NZ_JJLK01000063.1 Protein Homology CDS 264178 265596 . - 0 ID=cds-WP_000558044.1;Parent=gene-AD12_RS0123910;Dbxref=GenBank:WP_000558044.1;Name=WP_000558044.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AD12_RS0123910;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000558044.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 265735 266094 . - . ID=gene-AD12_RS13290;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AD12_RS13290;old_locus_tag=AD12_1950 NZ_JJLK01000063.1 Protein Homology CDS 265735 266094 . - 0 ID=cds-WP_001191027.1;Parent=gene-AD12_RS13290;Dbxref=GenBank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AD12_RS13290;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 266094 267020 . - . ID=gene-AD12_RS13285;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AD12_RS13285;old_locus_tag=AD12_1951 NZ_JJLK01000063.1 Protein Homology CDS 266094 267020 . - 0 ID=cds-WP_000257409.1;Parent=gene-AD12_RS13285;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AD12_RS13285;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 267084 268472 . - . ID=gene-AD12_RS13280;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AD12_RS13280;old_locus_tag=AD12_1952 NZ_JJLK01000063.1 Protein Homology CDS 267084 268472 . - 0 ID=cds-WP_001296740.1;Parent=gene-AD12_RS13280;Dbxref=GenBank:WP_001296740.1;Name=WP_001296740.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD12_RS13280;product=succinate-semialdehyde dehydrogenase;protein_id=WP_001296740.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 268573 269454 . + . ID=gene-AD12_RS13275;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AD12_RS13275;old_locus_tag=AD12_1953 NZ_JJLK01000063.1 Protein Homology CDS 268573 269454 . + 0 ID=cds-WP_000366463.1;Parent=gene-AD12_RS13275;Dbxref=GenBank:WP_000366463.1;Name=WP_000366463.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310160.1;locus_tag=AD12_RS13275;product=putrescine utilization regulator PtrR;protein_id=WP_000366463.1;transl_table=11 NZ_JJLK01000063.1 RefSeq pseudogene 269532 270646 . + . ID=gene-AD12_RS29045;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=pseudogene;locus_tag=AD12_RS29045;pseudo=true NZ_JJLK01000063.1 Protein Homology CDS 269532 270646 . + 0 ID=cds-AD12_RS29045;Parent=gene-AD12_RS29045;Note=frameshifted;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707449.1;locus_tag=AD12_RS29045;product=putative protein YneK;pseudo=true;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 270796 271986 . + . ID=gene-AD12_RS13265;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AD12_RS13265;old_locus_tag=AD12_1956 NZ_JJLK01000063.1 Protein Homology CDS 270796 271986 . + 0 ID=cds-WP_000210807.1;Parent=gene-AD12_RS13265;Dbxref=GenBank:WP_000210807.1;Name=WP_000210807.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AD12_RS13265;product=L-arabinose MFS transporter;protein_id=WP_000210807.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 272011 272676 . - . ID=gene-AD12_RS13260;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AD12_RS13260;old_locus_tag=AD12_1957 NZ_JJLK01000063.1 Protein Homology CDS 272011 272676 . - 0 ID=cds-WP_000885033.1;Parent=gene-AD12_RS13260;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AD12_RS13260;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 272888 273322 . + . ID=gene-AD12_RS13255;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AD12_RS13255;old_locus_tag=AD12_1958 NZ_JJLK01000063.1 Protein Homology CDS 272888 273322 . + 0 ID=cds-WP_000843419.1;Parent=gene-AD12_RS13255;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AD12_RS13255;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 273342 273725 . + . ID=gene-AD12_RS13250;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AD12_RS13250;old_locus_tag=AD12_1959 NZ_JJLK01000063.1 Protein Homology CDS 273342 273725 . + 0 ID=cds-WP_000091199.1;Parent=gene-AD12_RS13250;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AD12_RS13250;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 273757 273975 . + . ID=gene-AD12_RS13245;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AD12_RS13245;old_locus_tag=AD12_1960 NZ_JJLK01000063.1 Protein Homology CDS 273757 273975 . + 0 ID=cds-WP_000803659.1;Parent=gene-AD12_RS13245;Dbxref=GenBank:WP_000803659.1;Name=WP_000803659.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AD12_RS13245;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803659.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 274032 275471 . - . ID=gene-AD12_RS13240;Name=AD12_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13240;old_locus_tag=AD12_1961 NZ_JJLK01000063.1 Protein Homology CDS 274032 275471 . - 0 ID=cds-WP_000012618.1;Parent=gene-AD12_RS13240;Dbxref=GenBank:WP_000012618.1;Name=WP_000012618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000012594.1;locus_tag=AD12_RS13240;product=6-phospho-beta-glucosidase;protein_id=WP_000012618.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 275496 277169 . - . ID=gene-AD12_RS13235;Name=AD12_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13235;old_locus_tag=AD12_1962 NZ_JJLK01000063.1 Protein Homology CDS 275496 277169 . - 0 ID=cds-WP_001022772.1;Parent=gene-AD12_RS13235;Dbxref=GenBank:WP_001022772.1;Name=WP_001022772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233185.1;locus_tag=AD12_RS13235;product=carbohydrate porin;protein_id=WP_001022772.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 277225 277536 . - . ID=gene-AD12_RS13230;Name=AD12_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13230;old_locus_tag=AD12_1963 NZ_JJLK01000063.1 Protein Homology CDS 277225 277536 . - 0 ID=cds-WP_001296721.1;Parent=gene-AD12_RS13230;Dbxref=GenBank:WP_001296721.1;Name=WP_001296721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314746.1;locus_tag=AD12_RS13230;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001296721.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 277564 278886 . - . ID=gene-AD12_RS13225;Name=AD12_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13225;old_locus_tag=AD12_1964 NZ_JJLK01000063.1 Protein Homology CDS 277564 278886 . - 0 ID=cds-WP_032286471.1;Parent=gene-AD12_RS13225;Dbxref=GenBank:WP_032286471.1;Name=WP_032286471.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736301.1;locus_tag=AD12_RS13225;product=PTS sugar transporter subunit IIC;protein_id=WP_032286471.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 279001 279312 . - . ID=gene-AD12_RS13220;Name=AD12_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13220;old_locus_tag=AD12_1965 NZ_JJLK01000063.1 Protein Homology CDS 279001 279312 . - 0 ID=cds-WP_000722571.1;Parent=gene-AD12_RS13220;Dbxref=GenBank:WP_000722571.1;Name=WP_000722571.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722572.1;locus_tag=AD12_RS13220;product=PTS sugar transporter subunit IIB;protein_id=WP_000722571.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 279511 280209 . + . ID=gene-AD12_RS13215;Name=AD12_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS13215;old_locus_tag=AD12_1967 NZ_JJLK01000063.1 Protein Homology CDS 279511 280209 . + 0 ID=cds-WP_032286472.1;Parent=gene-AD12_RS13215;Dbxref=GenBank:WP_032286472.1;Name=WP_032286472.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000577178.1;locus_tag=AD12_RS13215;product=GntR family transcriptional regulator;protein_id=WP_032286472.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 280254 281153 . - . ID=gene-AD12_RS13210;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AD12_RS13210;old_locus_tag=AD12_1968 NZ_JJLK01000063.1 Protein Homology CDS 280254 281153 . - 0 ID=cds-WP_000087192.1;Parent=gene-AD12_RS13210;Dbxref=GenBank:WP_000087192.1;Name=WP_000087192.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310167.1;locus_tag=AD12_RS13210;product=O-acetylserine/cysteine exporter;protein_id=WP_000087192.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 281348 282535 . + . ID=gene-AD12_RS13205;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AD12_RS13205;old_locus_tag=AD12_1969 NZ_JJLK01000063.1 Protein Homology CDS 281348 282535 . + 0 ID=cds-WP_001054189.1;Parent=gene-AD12_RS13205;Dbxref=GenBank:WP_001054189.1;Name=WP_001054189.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AD12_RS13205;product=efflux MFS transporter YdeE;protein_id=WP_001054189.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 282662 282757 . + . ID=gene-AD12_RS0123920;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AD12_RS0123920 NZ_JJLK01000063.1 Protein Homology CDS 282662 282757 . + 0 ID=cds-WP_000901367.1;Parent=gene-AD12_RS0123920;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AD12_RS0123920;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 282757 282861 . + . ID=gene-AD12_RS29275;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AD12_RS29275 NZ_JJLK01000063.1 Protein Homology CDS 282757 282861 . + 0 ID=cds-WP_211180496.1;Parent=gene-AD12_RS29275;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AD12_RS29275;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 282976 283866 . - . ID=gene-AD12_RS13200;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AD12_RS13200;old_locus_tag=AD12_1970 NZ_JJLK01000063.1 Protein Homology CDS 282976 283866 . - 0 ID=cds-WP_000592826.1;Parent=gene-AD12_RS13200;Dbxref=GenBank:WP_000592826.1;Name=WP_000592826.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AD12_RS13200;product=diguanylate cyclase DgcZ;protein_id=WP_000592826.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 284121 284513 . - . ID=gene-AD12_RS13195;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AD12_RS13195;old_locus_tag=AD12_1971 NZ_JJLK01000063.1 Protein Homology CDS 284121 284513 . - 0 ID=cds-WP_000671731.1;Parent=gene-AD12_RS13195;Dbxref=GenBank:WP_000671731.1;Name=WP_000671731.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AD12_RS13195;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671731.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 284789 285307 . + . ID=gene-AD12_RS13190;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AD12_RS13190;old_locus_tag=AD12_1972 NZ_JJLK01000063.1 Protein Homology CDS 284789 285307 . + 0 ID=cds-WP_001024810.1;Parent=gene-AD12_RS13190;Dbxref=GenBank:WP_001024810.1;Name=WP_001024810.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=AD12_RS13190;product=2-oxo-tetronate isomerase;protein_id=WP_001024810.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 285352 287397 . - . ID=gene-AD12_RS13185;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AD12_RS13185;old_locus_tag=AD12_1973 NZ_JJLK01000063.1 Protein Homology CDS 285352 287397 . - 0 ID=cds-WP_001356186.1;Parent=gene-AD12_RS13185;Dbxref=GenBank:WP_001356186.1;Name=WP_001356186.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310174.1;locus_tag=AD12_RS13185;product=peptidyl-dipeptidase Dcp;protein_id=WP_001356186.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 287534 288280 . + . ID=gene-AD12_RS13180;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AD12_RS13180;old_locus_tag=AD12_1974 NZ_JJLK01000063.1 Protein Homology CDS 287534 288280 . + 0 ID=cds-WP_000636571.1;Parent=gene-AD12_RS13180;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AD12_RS13180;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 288369 289055 . + . ID=gene-AD12_RS13175;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AD12_RS13175;old_locus_tag=AD12_1975 NZ_JJLK01000063.1 Protein Homology CDS 288369 289055 . + 0 ID=cds-WP_000215549.1;Parent=gene-AD12_RS13175;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AD12_RS13175;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 289233 289436 . + . ID=gene-AD12_RS13170;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AD12_RS13170;old_locus_tag=AD12_1976 NZ_JJLK01000063.1 Protein Homology CDS 289233 289436 . + 0 ID=cds-WP_000214712.1;Parent=gene-AD12_RS13170;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AD12_RS13170;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 289472 290932 . - . ID=gene-AD12_RS13165;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AD12_RS13165;old_locus_tag=AD12_1977 NZ_JJLK01000063.1 Protein Homology CDS 289472 290932 . - 0 ID=cds-WP_000527753.1;Parent=gene-AD12_RS13165;Dbxref=GenBank:WP_000527753.1;Name=WP_000527753.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=AD12_RS13165;product=mannitol dehydrogenase family protein;protein_id=WP_000527753.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 291021 292388 . - . ID=gene-AD12_RS13160;Name=ydfJ;gbkey=Gene;gene=ydfJ;gene_biotype=protein_coding;locus_tag=AD12_RS13160;old_locus_tag=AD12_1978 NZ_JJLK01000063.1 Protein Homology CDS 291021 292388 . - 0 ID=cds-WP_000151243.1;Parent=gene-AD12_RS13160;Dbxref=GenBank:WP_000151243.1;Name=WP_000151243.1;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AD12_RS13160;product=MHS family MFS transporter YdfJ;protein_id=WP_000151243.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 292446 293465 . - . ID=gene-AD12_RS13155;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AD12_RS13155;old_locus_tag=AD12_1979 NZ_JJLK01000063.1 Protein Homology CDS 292446 293465 . - 0 ID=cds-WP_000836058.1;Parent=gene-AD12_RS13155;Dbxref=GenBank:WP_000836058.1;Name=WP_000836058.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AD12_RS13155;product=Zn-dependent oxidoreductase;protein_id=WP_000836058.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 293477 294691 . - . ID=gene-AD12_RS13150;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AD12_RS13150;old_locus_tag=AD12_1980 NZ_JJLK01000063.1 Protein Homology CDS 293477 294691 . - 0 ID=cds-WP_001295394.1;Parent=gene-AD12_RS13150;Dbxref=GenBank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AD12_RS13150;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 294897 295223 . - . ID=gene-AD12_RS13145;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AD12_RS13145;old_locus_tag=AD12_1981 NZ_JJLK01000063.1 Protein Homology CDS 294897 295223 . - 0 ID=cds-WP_000598292.1;Parent=gene-AD12_RS13145;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AD12_RS13145;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 295358 295699 . + . ID=gene-AD12_RS13140;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AD12_RS13140;old_locus_tag=AD12_1982 NZ_JJLK01000063.1 Protein Homology CDS 295358 295699 . + 0 ID=cds-WP_000705211.1;Parent=gene-AD12_RS13140;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AD12_RS13140;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 295734 296294 . + . ID=gene-AD12_RS13135;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AD12_RS13135;old_locus_tag=AD12_1983 NZ_JJLK01000063.1 Protein Homology CDS 295734 296294 . + 0 ID=cds-WP_001138581.1;Parent=gene-AD12_RS13135;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AD12_RS13135;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 296297 297007 . - . ID=gene-AD12_RS13130;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AD12_RS13130;old_locus_tag=AD12_1984 NZ_JJLK01000063.1 Protein Homology CDS 296297 297007 . - 0 ID=cds-WP_001321287.1;Parent=gene-AD12_RS13130;Dbxref=GenBank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AD12_RS13130;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 297115 297420 . + . ID=gene-AD12_RS13125;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AD12_RS13125;old_locus_tag=AD12_1985 NZ_JJLK01000063.1 Protein Homology CDS 297115 297420 . + 0 ID=cds-WP_001307224.1;Parent=gene-AD12_RS13125;Dbxref=GenBank:WP_001307224.1;Name=WP_001307224.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=AD12_RS13125;product=DUF1161 domain-containing protein;protein_id=WP_001307224.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 297619 300045 . + . ID=gene-AD12_RS13120;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AD12_RS13120;old_locus_tag=AD12_1986 NZ_JJLK01000063.1 Protein Homology CDS 297619 300045 . + 0 ID=cds-WP_000041556.1;Parent=gene-AD12_RS13120;Dbxref=GenBank:WP_000041556.1;Name=WP_000041556.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AD12_RS13120;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_000041556.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 300106 302529 . + . ID=gene-AD12_RS13115;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AD12_RS13115;old_locus_tag=AD12_1987 NZ_JJLK01000063.1 Protein Homology CDS 300106 302529 . + 0 ID=cds-WP_001342404.1;Parent=gene-AD12_RS13115;Dbxref=GenBank:WP_001342404.1;Name=WP_001342404.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AD12_RS13115;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_001342404.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 302540 303157 . + . ID=gene-AD12_RS13110;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AD12_RS13110;old_locus_tag=AD12_1988 NZ_JJLK01000063.1 Protein Homology CDS 302540 303157 . + 0 ID=cds-WP_000213028.1;Parent=gene-AD12_RS13110;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD12_RS13110;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 303159 304013 . + . ID=gene-AD12_RS13105;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AD12_RS13105;old_locus_tag=AD12_1989 NZ_JJLK01000063.1 Protein Homology CDS 303159 304013 . + 0 ID=cds-WP_000526490.1;Parent=gene-AD12_RS13105;Dbxref=GenBank:WP_000526490.1;Name=WP_000526490.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AD12_RS13105;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_000526490.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 304056 304670 . + . ID=gene-AD12_RS13100;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AD12_RS13100;old_locus_tag=AD12_1990 NZ_JJLK01000063.1 Protein Homology CDS 304056 304670 . + 0 ID=cds-WP_000148710.1;Parent=gene-AD12_RS13100;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AD12_RS13100;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 304829 306121 . + . ID=gene-AD12_RS13095;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AD12_RS13095;old_locus_tag=AD12_1991 NZ_JJLK01000063.1 Protein Homology CDS 304829 306121 . + 0 ID=cds-WP_071586481.1;Parent=gene-AD12_RS13095;Dbxref=GenBank:WP_071586481.1;Name=WP_071586481.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AD12_RS13095;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_071586481.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 306074 306769 . - . ID=gene-AD12_RS13090;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD12_RS13090;old_locus_tag=AD12_1992 NZ_JJLK01000063.1 Protein Homology CDS 306074 306769 . - 0 ID=cds-WP_000919231.1;Parent=gene-AD12_RS13090;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AD12_RS13090;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 306894 308114 . - . ID=gene-AD12_RS13085;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AD12_RS13085;old_locus_tag=AD12_1993 NZ_JJLK01000063.1 Protein Homology CDS 306894 308114 . - 0 ID=cds-WP_000225276.1;Parent=gene-AD12_RS13085;Dbxref=GenBank:WP_000225276.1;Name=WP_000225276.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=AD12_RS13085;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225276.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 308249 309142 . - . ID=gene-AD12_RS13080;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AD12_RS13080;old_locus_tag=AD12_1994 NZ_JJLK01000063.1 Protein Homology CDS 308249 309142 . - 0 ID=cds-WP_001019530.1;Parent=gene-AD12_RS13080;Dbxref=GenBank:WP_001019530.1;Name=WP_001019530.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=AD12_RS13080;product=LysR family transcriptional regulator;protein_id=WP_001019530.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 309249 310502 . + . ID=gene-AD12_RS13075;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AD12_RS13075;old_locus_tag=AD12_1995 NZ_JJLK01000063.1 Protein Homology CDS 309249 310502 . + 0 ID=cds-WP_000091819.1;Parent=gene-AD12_RS13075;Dbxref=GenBank:WP_000091819.1;Name=WP_000091819.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AD12_RS13075;product=MFS transporter;protein_id=WP_000091819.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 310551 310670 . - . ID=gene-AD12_RS29890;Name=AD12_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29890 NZ_JJLK01000063.1 Protein Homology CDS 310551 310670 . - 0 ID=cds-WP_001299090.1;Parent=gene-AD12_RS29890;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AD12_RS29890;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 310926 311234 . + . ID=gene-AD12_RS13070;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AD12_RS13070;old_locus_tag=AD12_1996 NZ_JJLK01000063.1 Protein Homology CDS 310926 311234 . + 0 ID=cds-WP_001342195.1;Parent=gene-AD12_RS13070;Dbxref=GenBank:WP_001342195.1;Name=WP_001342195.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=AD12_RS13070;product=acid resistance repetitive basic protein Asr;protein_id=WP_001342195.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 311327 311410 . + . ID=gene-AD12_RS0123925;Name=AD12_RS0123925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123925 NZ_JJLK01000063.1 Protein Homology CDS 311327 311410 . + 0 ID=cds-WP_000233090.1;Parent=gene-AD12_RS0123925;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AD12_RS0123925;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 311510 312331 . + . ID=gene-AD12_RS13065;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AD12_RS13065;old_locus_tag=AD12_1997 NZ_JJLK01000063.1 Protein Homology CDS 311510 312331 . + 0 ID=cds-WP_001260840.1;Parent=gene-AD12_RS13065;Dbxref=GenBank:WP_001260840.1;Name=WP_001260840.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707495.1;locus_tag=AD12_RS13065;product=trypsin-like serine peptidase;protein_id=WP_001260840.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 312370 312699 . - . ID=gene-AD12_RS13060;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AD12_RS13060;old_locus_tag=AD12_1998 NZ_JJLK01000063.1 Protein Homology CDS 312370 312699 . - 0 ID=cds-WP_000046661.1;Parent=gene-AD12_RS13060;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AD12_RS13060;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 312686 313051 . - . ID=gene-AD12_RS13055;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AD12_RS13055;old_locus_tag=AD12_1999 NZ_JJLK01000063.1 Protein Homology CDS 312686 313051 . - 0 ID=cds-WP_000276152.1;Parent=gene-AD12_RS13055;Dbxref=GenBank:WP_000276152.1;Name=WP_000276152.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AD12_RS13055;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276152.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 313158 313328 . - . ID=gene-AD12_RS29895;Name=AD12_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29895 NZ_JJLK01000063.1 Protein Homology CDS 313158 313328 . - 0 ID=cds-WP_001303517.1;Parent=gene-AD12_RS29895;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AD12_RS29895;product=protein YdgV;protein_id=WP_001303517.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 313463 314497 . + . ID=gene-AD12_RS13050;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AD12_RS13050;old_locus_tag=AD12_2000 NZ_JJLK01000063.1 Protein Homology CDS 313463 314497 . + 0 ID=cds-WP_001118241.1;Parent=gene-AD12_RS13050;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AD12_RS13050;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 314522 315910 . - . ID=gene-AD12_RS13045;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AD12_RS13045;old_locus_tag=AD12_2001 NZ_JJLK01000063.1 Protein Homology CDS 314522 315910 . - 0 ID=cds-WP_000014036.1;Parent=gene-AD12_RS13045;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AD12_RS13045;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 315921 317453 . - . ID=gene-AD12_RS13040;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AD12_RS13040;old_locus_tag=AD12_2002 NZ_JJLK01000063.1 Protein Homology CDS 315921 317453 . - 0 ID=cds-WP_001356270.1;Parent=gene-AD12_RS13040;Dbxref=GenBank:WP_001356270.1;Name=WP_001356270.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AD12_RS13040;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001356270.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 317977 318921 . + . ID=gene-AD12_RS13035;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AD12_RS13035;old_locus_tag=AD12_2003 NZ_JJLK01000063.1 Protein Homology CDS 317977 318921 . + 0 ID=cds-WP_000769321.1;Parent=gene-AD12_RS13035;Dbxref=GenBank:WP_000769321.1;Name=WP_000769321.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AD12_RS13035;product=DUF1471 family protein YdgH;protein_id=WP_000769321.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 319107 320489 . + . ID=gene-AD12_RS13030;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AD12_RS13030;old_locus_tag=AD12_2004 NZ_JJLK01000063.1 Protein Homology CDS 319107 320489 . + 0 ID=cds-WP_000412379.1;Parent=gene-AD12_RS13030;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AD12_RS13030;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 320526 321248 . + . ID=gene-AD12_RS13025;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AD12_RS13025;old_locus_tag=AD12_2005 NZ_JJLK01000063.1 Protein Homology CDS 320526 321248 . + 0 ID=cds-WP_000513679.1;Parent=gene-AD12_RS13025;Dbxref=GenBank:WP_000513679.1;Name=WP_000513679.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AD12_RS13025;product=dihydromonapterin reductase;protein_id=WP_000513679.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 321245 321580 . - . ID=gene-AD12_RS13020;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AD12_RS13020;old_locus_tag=AD12_2006 NZ_JJLK01000063.1 Protein Homology CDS 321245 321580 . - 0 ID=cds-WP_000524868.1;Parent=gene-AD12_RS13020;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AD12_RS13020;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 321709 322428 . + . ID=gene-AD12_RS13015;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AD12_RS13015;old_locus_tag=AD12_2007 NZ_JJLK01000063.1 Protein Homology CDS 321709 322428 . + 0 ID=cds-WP_001092508.1;Parent=gene-AD12_RS13015;Dbxref=GenBank:WP_001092508.1;Name=WP_001092508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AD12_RS13015;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 322432 323733 . + . ID=gene-AD12_RS13010;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AD12_RS13010;old_locus_tag=AD12_2008 NZ_JJLK01000063.1 Protein Homology CDS 322432 323733 . + 0 ID=cds-WP_000732497.1;Parent=gene-AD12_RS13010;Dbxref=GenBank:WP_000732497.1;Name=WP_000732497.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AD12_RS13010;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732497.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 323809 324738 . + . ID=gene-AD12_RS13005;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AD12_RS13005;old_locus_tag=AD12_2009 NZ_JJLK01000063.1 Protein Homology CDS 323809 324738 . + 0 ID=cds-WP_001295399.1;Parent=gene-AD12_RS13005;Dbxref=GenBank:WP_001295399.1;Name=WP_001295399.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AD12_RS13005;product=DNA replication terminus site-binding protein;protein_id=WP_001295399.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 324735 326138 . - . ID=gene-AD12_RS13000;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AD12_RS13000;old_locus_tag=AD12_2010 NZ_JJLK01000063.1 Protein Homology CDS 324735 326138 . - 0 ID=cds-WP_001099102.1;Parent=gene-AD12_RS13000;Dbxref=GenBank:WP_001099102.1;Name=WP_001099102.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=AD12_RS13000;product=class II fumarate hydratase;protein_id=WP_001099102.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 326281 327927 . - . ID=gene-AD12_RS12995;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AD12_RS12995;old_locus_tag=AD12_2011 NZ_JJLK01000063.1 Protein Homology CDS 326281 327927 . - 0 ID=cds-WP_000066639.1;Parent=gene-AD12_RS12995;Dbxref=GenBank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AD12_RS12995;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 328126 329301 . + . ID=gene-AD12_RS12990;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AD12_RS12990;old_locus_tag=AD12_2012 NZ_JJLK01000063.1 Protein Homology CDS 328126 329301 . + 0 ID=cds-WP_001170675.1;Parent=gene-AD12_RS12990;Dbxref=GenBank:WP_001170675.1;Name=WP_001170675.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AD12_RS12990;product=mannose-6-phosphate isomerase;protein_id=WP_001170675.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 329402 330910 . + . ID=gene-AD12_RS12985;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AD12_RS12985;old_locus_tag=AD12_2013 NZ_JJLK01000063.1 Protein Homology CDS 329402 330910 . + 0 ID=cds-WP_001043360.1;Parent=gene-AD12_RS12985;Dbxref=GenBank:WP_001043360.1;Name=WP_001043360.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AD12_RS12985;product=YdgA family protein;protein_id=WP_001043360.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 330955 332220 . - . ID=gene-AD12_RS12980;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AD12_RS12980;old_locus_tag=AD12_2014 NZ_JJLK01000063.1 Protein Homology CDS 330955 332220 . - 0 ID=cds-WP_001227021.1;Parent=gene-AD12_RS12980;Dbxref=GenBank:WP_001227021.1;Name=WP_001227021.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AD12_RS12980;product=glucuronide uptake porin UidC;protein_id=WP_001227021.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 332259 333632 . - . ID=gene-AD12_RS12975;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AD12_RS12975;old_locus_tag=AD12_2015 NZ_JJLK01000063.1 Protein Homology CDS 332259 333632 . - 0 ID=cds-WP_001075857.1;Parent=gene-AD12_RS12975;Dbxref=GenBank:WP_001075857.1;Name=WP_001075857.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AD12_RS12975;product=glucuronide transporter;protein_id=WP_001075857.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 333629 335440 . - . ID=gene-AD12_RS12970;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AD12_RS12970;old_locus_tag=AD12_2016 NZ_JJLK01000063.1 Protein Homology CDS 333629 335440 . - 0 ID=cds-WP_000945912.1;Parent=gene-AD12_RS12970;Dbxref=GenBank:WP_000945912.1;Name=WP_000945912.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AD12_RS12970;product=beta-glucuronidase;protein_id=WP_000945912.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 335829 336419 . - . ID=gene-AD12_RS12965;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AD12_RS12965;old_locus_tag=AD12_2017 NZ_JJLK01000063.1 Protein Homology CDS 335829 336419 . - 0 ID=cds-WP_000969092.1;Parent=gene-AD12_RS12965;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AD12_RS12965;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 336648 337415 . - . ID=gene-AD12_RS12960;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AD12_RS12960;old_locus_tag=AD12_2018 NZ_JJLK01000063.1 Protein Homology CDS 336648 337415 . - 0 ID=cds-WP_000483353.1;Parent=gene-AD12_RS12960;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AD12_RS12960;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 337527 338555 . - . ID=gene-AD12_RS12955;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AD12_RS12955;old_locus_tag=AD12_2019 NZ_JJLK01000063.1 Protein Homology CDS 337527 338555 . - 0 ID=cds-WP_000179513.1;Parent=gene-AD12_RS12955;Dbxref=GenBank:WP_000179513.1;Name=WP_000179513.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310355.1;locus_tag=AD12_RS12955;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179513.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 338730 340322 . + . ID=gene-AD12_RS12950;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AD12_RS12950;old_locus_tag=AD12_2020 NZ_JJLK01000063.1 Protein Homology CDS 338730 340322 . + 0 ID=cds-WP_000125598.1;Parent=gene-AD12_RS12950;Dbxref=GenBank:WP_000125598.1;Name=WP_000125598.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AD12_RS12950;product=PTS maltose transporter subunit IICB;protein_id=WP_000125598.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 340332 341504 . + . ID=gene-AD12_RS12945;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AD12_RS12945;old_locus_tag=AD12_2021 NZ_JJLK01000063.1 Protein Homology CDS 340332 341504 . + 0 ID=cds-WP_000459412.1;Parent=gene-AD12_RS12945;Dbxref=GenBank:WP_000459412.1;Name=WP_000459412.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AD12_RS12945;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459412.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 341608 342609 . + . ID=gene-AD12_RS12940;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AD12_RS12940;old_locus_tag=AD12_2022 NZ_JJLK01000063.1 Protein Homology CDS 341608 342609 . + 0 ID=cds-WP_000567478.1;Parent=gene-AD12_RS12940;Dbxref=GenBank:WP_000567478.1;Name=WP_000567478.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AD12_RS12940;product=adenosine deaminase;protein_id=WP_000567478.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 342644 343684 . - . ID=gene-AD12_RS12935;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AD12_RS12935;old_locus_tag=AD12_2023 NZ_JJLK01000063.1 Protein Homology CDS 342644 343684 . - 0 ID=cds-WP_001282516.1;Parent=gene-AD12_RS12935;Dbxref=GenBank:WP_001282516.1;Name=WP_001282516.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AD12_RS12935;product=oxidoreductase;protein_id=WP_001282516.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 343927 344052 . + . ID=gene-AD12_RS0123930;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AD12_RS0123930 NZ_JJLK01000063.1 Protein Homology CDS 343927 344052 . + 0 ID=cds-WP_001300888.1;Parent=gene-AD12_RS0123930;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AD12_RS0123930;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 344325 344540 . + . ID=gene-AD12_RS12930;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AD12_RS12930;old_locus_tag=AD12_2024 NZ_JJLK01000063.1 Protein Homology CDS 344325 344540 . + 0 ID=cds-WP_000217950.1;Parent=gene-AD12_RS12930;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AD12_RS12930;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 344626 345066 . + . ID=gene-AD12_RS12925;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AD12_RS12925;old_locus_tag=AD12_2025 NZ_JJLK01000063.1 Protein Homology CDS 344626 345066 . + 0 ID=cds-WP_032286473.1;Parent=gene-AD12_RS12925;Dbxref=GenBank:WP_032286473.1;Name=WP_032286473.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310362.2;locus_tag=AD12_RS12925;product=DUF2569 domain-containing protein;protein_id=WP_032286473.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 345143 345724 . + . ID=gene-AD12_RS12920;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AD12_RS12920;old_locus_tag=AD12_2026 NZ_JJLK01000063.1 Protein Homology CDS 345143 345724 . + 0 ID=cds-WP_000133193.1;Parent=gene-AD12_RS12920;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AD12_RS12920;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 345724 346302 . + . ID=gene-AD12_RS12915;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AD12_RS12915;old_locus_tag=AD12_2027 NZ_JJLK01000063.1 Protein Homology CDS 345724 346302 . + 0 ID=cds-WP_000991809.1;Parent=gene-AD12_RS12915;Dbxref=GenBank:WP_000991809.1;Name=WP_000991809.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310364.1;locus_tag=AD12_RS12915;product=electron transport complex subunit RsxB;protein_id=WP_000991809.1;transl_table=11 NZ_JJLK01000063.1 RefSeq pseudogene 346295 348595 . + . ID=gene-AD12_RS12910;Name=rsxC;end_range=348595,.;gbkey=Gene;gene=rsxC;gene_biotype=pseudogene;locus_tag=AD12_RS12910;old_locus_tag=AD12_2028;partial=true;pseudo=true NZ_JJLK01000063.1 Protein Homology CDS 346295 348595 . + 0 ID=cds-AD12_RS12910;Parent=gene-AD12_RS12910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=348595,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310365.1;locus_tag=AD12_RS12910;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 348998 350056 . + . ID=gene-AD12_RS12905;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AD12_RS12905;old_locus_tag=AD12_2029 NZ_JJLK01000063.1 Protein Homology CDS 348998 350056 . + 0 ID=cds-WP_000231922.1;Parent=gene-AD12_RS12905;Dbxref=GenBank:WP_000231922.1;Name=WP_000231922.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=AD12_RS12905;product=electron transport complex subunit RsxD;protein_id=WP_000231922.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 350060 350680 . + . ID=gene-AD12_RS12900;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AD12_RS12900;old_locus_tag=AD12_2030 NZ_JJLK01000063.1 Protein Homology CDS 350060 350680 . + 0 ID=cds-WP_000920784.1;Parent=gene-AD12_RS12900;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AD12_RS12900;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 350684 351379 . + . ID=gene-AD12_RS12895;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AD12_RS12895;old_locus_tag=AD12_2031 NZ_JJLK01000063.1 Protein Homology CDS 350684 351379 . + 0 ID=cds-WP_001289652.1;Parent=gene-AD12_RS12895;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AD12_RS12895;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 351379 352014 . + . ID=gene-AD12_RS12890;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AD12_RS12890;old_locus_tag=AD12_2032 NZ_JJLK01000063.1 Protein Homology CDS 351379 352014 . + 0 ID=cds-WP_001030339.1;Parent=gene-AD12_RS12890;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AD12_RS12890;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 352625 354127 . + . ID=gene-AD12_RS12880;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AD12_RS12880;old_locus_tag=AD12_2034 NZ_JJLK01000063.1 Protein Homology CDS 352625 354127 . + 0 ID=cds-WP_000100932.1;Parent=gene-AD12_RS12880;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AD12_RS12880;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 354233 354838 . + . ID=gene-AD12_RS12875;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AD12_RS12875;old_locus_tag=AD12_2035 NZ_JJLK01000063.1 Protein Homology CDS 354233 354838 . + 0 ID=cds-WP_000765748.1;Parent=gene-AD12_RS12875;Dbxref=GenBank:WP_000765748.1;Name=WP_000765748.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AD12_RS12875;product=glutathione transferase GstA;protein_id=WP_000765748.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 354882 355745 . - . ID=gene-AD12_RS12870;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AD12_RS12870;old_locus_tag=AD12_2036 NZ_JJLK01000063.1 Protein Homology CDS 354882 355745 . - 0 ID=cds-WP_001307229.1;Parent=gene-AD12_RS12870;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AD12_RS12870;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 355804 357078 . - . ID=gene-AD12_RS12865;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AD12_RS12865;old_locus_tag=AD12_2037 NZ_JJLK01000063.1 Protein Homology CDS 355804 357078 . - 0 ID=cds-WP_001295400.1;Parent=gene-AD12_RS12865;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AD12_RS12865;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 357207 357863 . - . ID=gene-AD12_RS12860;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AD12_RS12860;old_locus_tag=AD12_2038 NZ_JJLK01000063.1 Protein Homology CDS 357207 357863 . - 0 ID=cds-WP_001282319.1;Parent=gene-AD12_RS12860;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AD12_RS12860;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 357922 358251 . - . ID=gene-AD12_RS12855;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AD12_RS12855;old_locus_tag=AD12_2039 NZ_JJLK01000063.1 Protein Homology CDS 357922 358251 . - 0 ID=cds-WP_000178044.1;Parent=gene-AD12_RS12855;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AD12_RS12855;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 358349 359458 . - . ID=gene-AD12_RS12850;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AD12_RS12850;old_locus_tag=AD12_2040 NZ_JJLK01000063.1 Protein Homology CDS 358349 359458 . - 0 ID=cds-WP_000835077.1;Parent=gene-AD12_RS12850;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AD12_RS12850;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 359732 360199 . + . ID=gene-AD12_RS12845;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AD12_RS12845;old_locus_tag=AD12_2041 NZ_JJLK01000063.1 Protein Homology CDS 359732 360199 . + 0 ID=cds-WP_000597196.1;Parent=gene-AD12_RS12845;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AD12_RS12845;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 360246 360680 . - . ID=gene-AD12_RS12840;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AD12_RS12840;old_locus_tag=AD12_2042 NZ_JJLK01000063.1 Protein Homology CDS 360246 360680 . - 0 ID=cds-WP_001296943.1;Parent=gene-AD12_RS12840;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AD12_RS12840;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JJLK01000063.1 RefSeq gene 360956 361136 . - . ID=gene-AD12_RS12835;Name=AD12_RS12835;end_range=361136,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS12835;old_locus_tag=AD12_2044;partial=true NZ_JJLK01000063.1 Protein Homology CDS 360956 361136 . - 1 ID=cds-WP_000306696.1;Parent=gene-AD12_RS12835;Dbxref=GenBank:WP_000306696.1;Name=WP_000306696.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=361136,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD12_RS12835;partial=true;product=IS1 family transposase;protein_id=WP_000306696.1;transl_table=11 ##sequence-region NZ_JJLK01000064.1 1 405783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000064.1 RefSeq region 1 405783 . + . ID=NZ_JJLK01000064.1:1..405783;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000064.1 RefSeq gene 16 713 . - . ID=gene-AD12_RS12830;Name=AD12_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS12830;old_locus_tag=AD12_2045 NZ_JJLK01000064.1 Protein Homology CDS 464 713 . - 0 ID=cds-WP_249403656.1;Parent=gene-AD12_RS12830;Dbxref=GenBank:WP_249403656.1;Name=WP_249403656.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS12830;product=IS1-like element IS1A family transposase;protein_id=WP_249403656.1;transl_table=11 NZ_JJLK01000064.1 Protein Homology CDS 16 464 . - 2 ID=cds-WP_249403656.1;Parent=gene-AD12_RS12830;Dbxref=GenBank:WP_249403656.1;Name=WP_249403656.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS12830;product=IS1-like element IS1A family transposase;protein_id=WP_249403656.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 763 954 . + . ID=gene-AD12_RS0123935;Name=AD12_RS0123935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0123935 NZ_JJLK01000064.1 Protein Homology CDS 763 954 . + 0 ID=cds-WP_032286509.1;Parent=gene-AD12_RS0123935;Dbxref=GenBank:WP_032286509.1;Name=WP_032286509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678892.1;locus_tag=AD12_RS0123935;product=DUF1656 domain-containing protein;protein_id=WP_032286509.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 957 1814 . + . ID=gene-AD12_RS12825;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AD12_RS12825;old_locus_tag=AD12_2047 NZ_JJLK01000064.1 Protein Homology CDS 957 1814 . + 0 ID=cds-WP_001356269.1;Parent=gene-AD12_RS12825;Dbxref=GenBank:WP_001356269.1;Name=WP_001356269.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310380.2;locus_tag=AD12_RS12825;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001356269.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 1814 3826 . + . ID=gene-AD12_RS12820;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AD12_RS12820;old_locus_tag=AD12_2048 NZ_JJLK01000064.1 Protein Homology CDS 1814 3826 . + 0 ID=cds-WP_000994333.1;Parent=gene-AD12_RS12820;Dbxref=GenBank:WP_000994333.1;Name=WP_000994333.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AD12_RS12820;product=FUSC family protein;protein_id=WP_000994333.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 3827 4348 . - . ID=gene-AD12_RS12815;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD12_RS12815;old_locus_tag=AD12_2049 NZ_JJLK01000064.1 Protein Homology CDS 3827 4348 . - 0 ID=cds-WP_001296937.1;Parent=gene-AD12_RS12815;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AD12_RS12815;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 4429 5325 . - . ID=gene-AD12_RS12810;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AD12_RS12810;old_locus_tag=AD12_2050 NZ_JJLK01000064.1 Protein Homology CDS 4429 5325 . - 0 ID=cds-WP_000250668.1;Parent=gene-AD12_RS12810;Dbxref=GenBank:WP_000250668.1;Name=WP_000250668.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AD12_RS12810;product=aldo/keto reductase;protein_id=WP_000250668.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 5374 5613 . - . ID=gene-AD12_RS0123940;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AD12_RS0123940 NZ_JJLK01000064.1 Protein Homology CDS 5374 5613 . - 0 ID=cds-WP_000840481.1;Parent=gene-AD12_RS0123940;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AD12_RS0123940;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 5716 6315 . + . ID=gene-AD12_RS12805;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AD12_RS12805;old_locus_tag=AD12_2052 NZ_JJLK01000064.1 Protein Homology CDS 5716 6315 . + 0 ID=cds-WP_001032936.1;Parent=gene-AD12_RS12805;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AD12_RS12805;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 6352 7449 . + . ID=gene-AD12_RS12800;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AD12_RS12800;old_locus_tag=AD12_2053 NZ_JJLK01000064.1 Protein Homology CDS 6352 7449 . + 0 ID=cds-WP_000093582.1;Parent=gene-AD12_RS12800;Dbxref=GenBank:WP_000093582.1;Name=WP_000093582.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AD12_RS12800;product=N-ethylmaleimide reductase;protein_id=WP_000093582.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 7530 7937 . + . ID=gene-AD12_RS12795;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AD12_RS12795;old_locus_tag=AD12_2054 NZ_JJLK01000064.1 Protein Homology CDS 7530 7937 . + 0 ID=cds-WP_001237796.1;Parent=gene-AD12_RS12795;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AD12_RS12795;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 8040 8687 . + . ID=gene-AD12_RS12790;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AD12_RS12790;old_locus_tag=AD12_2055 NZ_JJLK01000064.1 Protein Homology CDS 8040 8687 . + 0 ID=cds-WP_001282282.1;Parent=gene-AD12_RS12790;Dbxref=GenBank:WP_001282282.1;Name=WP_001282282.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310388.1;locus_tag=AD12_RS12790;product=ribonuclease T;protein_id=WP_001282282.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 8780 13396 . + . ID=gene-AD12_RS0123945;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=pseudogene;locus_tag=AD12_RS0123945;old_locus_tag=AD12_2057;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 8780 13396 . + 0 ID=cds-AD12_RS0123945;Parent=gene-AD12_RS0123945;Note=internal stop;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AD12_RS0123945;product=ATP-dependent helicase;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 13447 13794 . - . ID=gene-AD12_RS12785;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AD12_RS12785;old_locus_tag=AD12_2058 NZ_JJLK01000064.1 Protein Homology CDS 13447 13794 . - 0 ID=cds-WP_000108172.1;Parent=gene-AD12_RS12785;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AD12_RS12785;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 14128 14943 . + . ID=gene-AD12_RS12780;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AD12_RS12780;old_locus_tag=AD12_2060 NZ_JJLK01000064.1 Protein Homology CDS 14128 14943 . + 0 ID=cds-WP_000101193.1;Parent=gene-AD12_RS12780;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AD12_RS12780;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 15071 15652 . + . ID=gene-AD12_RS12775;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AD12_RS12775;old_locus_tag=AD12_2061 NZ_JJLK01000064.1 Protein Homology CDS 15071 15652 . + 0 ID=cds-WP_000007283.1;Parent=gene-AD12_RS12775;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AD12_RS12775;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 15798 16967 . - . ID=gene-AD12_RS12770;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AD12_RS12770;old_locus_tag=AD12_2062 NZ_JJLK01000064.1 Protein Homology CDS 15798 16967 . - 0 ID=cds-WP_001668639.1;Parent=gene-AD12_RS12770;Dbxref=GenBank:WP_001668639.1;Name=WP_001668639.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AD12_RS12770;product=MFS transporter;protein_id=WP_001668639.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 17133 17222 . - . ID=gene-AD12_RS0123950;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AD12_RS0123950;old_locus_tag=AD12_2063 NZ_JJLK01000064.1 Protein Homology CDS 17133 17222 . - 0 ID=cds-WP_000102278.1;Parent=gene-AD12_RS0123950;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AD12_RS0123950;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 17521 18546 . + . ID=gene-AD12_RS12765;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AD12_RS12765;old_locus_tag=AD12_2064 NZ_JJLK01000064.1 Protein Homology CDS 17521 18546 . + 0 ID=cds-WP_000190982.1;Parent=gene-AD12_RS12765;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AD12_RS12765;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 18543 19475 . - . ID=gene-AD12_RS12760;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AD12_RS12760;old_locus_tag=AD12_2065 NZ_JJLK01000064.1 Protein Homology CDS 18543 19475 . - 0 ID=cds-WP_000269501.1;Parent=gene-AD12_RS12760;Dbxref=GenBank:WP_000269501.1;Name=WP_000269501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AD12_RS12760;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269501.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 19588 20799 . + . ID=gene-AD12_RS12755;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AD12_RS12755;old_locus_tag=AD12_2066 NZ_JJLK01000064.1 Protein Homology CDS 19588 20799 . + 0 ID=cds-WP_001182363.1;Parent=gene-AD12_RS12755;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD12_RS12755;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 21101 22249 . + . ID=gene-AD12_RS12750;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AD12_RS12750;old_locus_tag=AD12_2067 NZ_JJLK01000064.1 Protein Homology CDS 21101 22249 . + 0 ID=cds-WP_000098911.1;Parent=gene-AD12_RS12750;Dbxref=GenBank:WP_000098911.1;Name=WP_000098911.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AD12_RS12750;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098911.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 22289 22930 . - . ID=gene-AD12_RS12745;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AD12_RS12745;old_locus_tag=AD12_2068 NZ_JJLK01000064.1 Protein Homology CDS 22289 22930 . - 0 ID=cds-WP_000493947.1;Parent=gene-AD12_RS12745;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AD12_RS12745;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 23145 24518 . + . ID=gene-AD12_RS12740;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AD12_RS12740;old_locus_tag=AD12_2069 NZ_JJLK01000064.1 Protein Homology CDS 23145 24518 . + 0 ID=cds-WP_001174942.1;Parent=gene-AD12_RS12740;Dbxref=GenBank:WP_001174942.1;Name=WP_001174942.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AD12_RS12740;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174942.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 24559 25815 . - . ID=gene-AD12_RS12735;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AD12_RS12735;old_locus_tag=AD12_2070 NZ_JJLK01000064.1 Protein Homology CDS 24559 25815 . - 0 ID=cds-WP_000534291.1;Parent=gene-AD12_RS12735;Dbxref=GenBank:WP_000534291.1;Name=WP_000534291.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AD12_RS12735;product=AIDA repeat-containing protein;protein_id=WP_000534291.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 26123 26199 . + . ID=gene-AD12_RS12730;Name=AD12_RS12730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS12730;old_locus_tag=AD12_2071 NZ_JJLK01000064.1 tRNAscan-SE tRNA 26123 26199 . + . ID=rna-AD12_RS12730;Parent=gene-AD12_RS12730;anticodon=(pos:26157..26159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS12730;product=tRNA-Val NZ_JJLK01000064.1 tRNAscan-SE exon 26123 26199 . + . ID=exon-AD12_RS12730-1;Parent=rna-AD12_RS12730;anticodon=(pos:26157..26159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS12730;product=tRNA-Val NZ_JJLK01000064.1 RefSeq gene 26204 26280 . + . ID=gene-AD12_RS12725;Name=AD12_RS12725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS12725;old_locus_tag=AD12_2072 NZ_JJLK01000064.1 tRNAscan-SE tRNA 26204 26280 . + . ID=rna-AD12_RS12725;Parent=gene-AD12_RS12725;anticodon=(pos:26238..26240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS12725;product=tRNA-Val NZ_JJLK01000064.1 tRNAscan-SE exon 26204 26280 . + . ID=exon-AD12_RS12725-1;Parent=rna-AD12_RS12725;anticodon=(pos:26238..26240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS12725;product=tRNA-Val NZ_JJLK01000064.1 RefSeq gene 26388 26693 . + . ID=gene-AD12_RS12720;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AD12_RS12720;old_locus_tag=AD12_2073 NZ_JJLK01000064.1 Protein Homology CDS 26388 26693 . + 0 ID=cds-WP_000212657.1;Parent=gene-AD12_RS12720;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AD12_RS12720;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 26819 28423 . + . ID=gene-AD12_RS12715;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AD12_RS12715;old_locus_tag=AD12_2074 NZ_JJLK01000064.1 Protein Homology CDS 26819 28423 . + 0 ID=cds-WP_000716929.1;Parent=gene-AD12_RS12715;Dbxref=GenBank:WP_000716929.1;Name=WP_000716929.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AD12_RS12715;product=FAD-NAD(P)-binding protein;protein_id=WP_000716929.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 28435 29247 . - . ID=gene-AD12_RS12710;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AD12_RS12710;old_locus_tag=AD12_2075 NZ_JJLK01000064.1 Protein Homology CDS 28435 29247 . - 0 ID=cds-WP_000587555.1;Parent=gene-AD12_RS12710;Dbxref=GenBank:WP_000587555.1;Name=WP_000587555.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AD12_RS12710;product=protein YdhT;protein_id=WP_000587555.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 29251 30036 . - . ID=gene-AD12_RS12705;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AD12_RS12705;old_locus_tag=AD12_2076 NZ_JJLK01000064.1 Protein Homology CDS 29251 30036 . - 0 ID=cds-WP_001069997.1;Parent=gene-AD12_RS12705;Dbxref=GenBank:WP_001069997.1;Name=WP_001069997.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310404.1;locus_tag=AD12_RS12705;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069997.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 30033 30701 . - . ID=gene-AD12_RS12700;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AD12_RS12700;old_locus_tag=AD12_2077 NZ_JJLK01000064.1 Protein Homology CDS 30033 30701 . - 0 ID=cds-WP_001310861.1;Parent=gene-AD12_RS12700;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AD12_RS12700;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 30765 31403 . - . ID=gene-AD12_RS12695;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AD12_RS12695;old_locus_tag=AD12_2078 NZ_JJLK01000064.1 Protein Homology CDS 30765 31403 . - 0 ID=cds-WP_001297805.1;Parent=gene-AD12_RS12695;Dbxref=GenBank:WP_001297805.1;Name=WP_001297805.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AD12_RS12695;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001297805.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 31416 33518 . - . ID=gene-AD12_RS12690;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AD12_RS12690;old_locus_tag=AD12_2079 NZ_JJLK01000064.1 Protein Homology CDS 31416 33518 . - 0 ID=cds-WP_001273518.1;Parent=gene-AD12_RS12690;Dbxref=GenBank:WP_001273518.1;Name=WP_001273518.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246021.1;locus_tag=AD12_RS12690;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273518.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 33539 34165 . - . ID=gene-AD12_RS12685;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AD12_RS12685;old_locus_tag=AD12_2080 NZ_JJLK01000064.1 Protein Homology CDS 33539 34165 . - 0 ID=cds-WP_001070230.1;Parent=gene-AD12_RS12685;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AD12_RS12685;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 34621 34830 . - . ID=gene-AD12_RS12680;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AD12_RS12680;old_locus_tag=AD12_2082 NZ_JJLK01000064.1 Protein Homology CDS 34621 34830 . - 0 ID=cds-WP_000528342.1;Parent=gene-AD12_RS12680;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AD12_RS12680;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 35184 35378 . + . ID=gene-AD12_RS29500;Name=AD12_RS29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29500 NZ_JJLK01000064.1 Protein Homology CDS 35184 35378 . + 0 ID=cds-WP_240806354.1;Parent=gene-AD12_RS29500;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AD12_RS29500;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 35386 36798 . + . ID=gene-AD12_RS12675;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AD12_RS12675;old_locus_tag=AD12_2083 NZ_JJLK01000064.1 Protein Homology CDS 35386 36798 . + 0 ID=cds-WP_001295403.1;Parent=gene-AD12_RS12675;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AD12_RS12675;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 37109 37345 . + . ID=gene-AD12_RS12670;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AD12_RS12670;old_locus_tag=AD12_2084 NZ_JJLK01000064.1 Protein Homology CDS 37109 37345 . + 0 ID=cds-WP_000648420.1;Parent=gene-AD12_RS12670;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AD12_RS12670;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 37409 38413 . - . ID=gene-AD12_RS12665;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AD12_RS12665;old_locus_tag=AD12_2085 NZ_JJLK01000064.1 Protein Homology CDS 37409 38413 . - 0 ID=cds-WP_000817104.1;Parent=gene-AD12_RS12665;Dbxref=GenBank:WP_000817104.1;Name=WP_000817104.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707577.1;locus_tag=AD12_RS12665;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817104.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 38562 38978 . - . ID=gene-AD12_RS12660;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AD12_RS12660;old_locus_tag=AD12_2086 NZ_JJLK01000064.1 Protein Homology CDS 38562 38978 . - 0 ID=cds-WP_001196530.1;Parent=gene-AD12_RS12660;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AD12_RS12660;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 38991 40211 . - . ID=gene-AD12_RS12655;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AD12_RS12655;old_locus_tag=AD12_2087 NZ_JJLK01000064.1 Protein Homology CDS 38991 40211 . - 0 ID=cds-WP_000144575.1;Parent=gene-AD12_RS12655;Dbxref=GenBank:WP_000144575.1;Name=WP_000144575.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AD12_RS12655;product=cysteine desulfurase SufS;protein_id=WP_000144575.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 40208 41479 . - . ID=gene-AD12_RS12650;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AD12_RS12650;old_locus_tag=AD12_2088 NZ_JJLK01000064.1 Protein Homology CDS 40208 41479 . - 0 ID=cds-WP_000908012.1;Parent=gene-AD12_RS12650;Dbxref=GenBank:WP_000908012.1;Name=WP_000908012.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AD12_RS12650;product=Fe-S cluster assembly protein SufD;protein_id=WP_000908012.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 41454 42200 . - . ID=gene-AD12_RS12645;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AD12_RS12645;old_locus_tag=AD12_2089 NZ_JJLK01000064.1 Protein Homology CDS 41454 42200 . - 0 ID=cds-WP_000948878.1;Parent=gene-AD12_RS12645;Dbxref=GenBank:WP_000948878.1;Name=WP_000948878.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AD12_RS12645;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948878.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 42210 43697 . - . ID=gene-AD12_RS12640;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AD12_RS12640;old_locus_tag=AD12_2090 NZ_JJLK01000064.1 Protein Homology CDS 42210 43697 . - 0 ID=cds-WP_000089364.1;Parent=gene-AD12_RS12640;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AD12_RS12640;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 43706 44074 . - . ID=gene-AD12_RS12635;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AD12_RS12635;old_locus_tag=AD12_2091 NZ_JJLK01000064.1 Protein Homology CDS 43706 44074 . - 0 ID=cds-WP_000367160.1;Parent=gene-AD12_RS12635;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AD12_RS12635;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 44623 44811 . - . ID=gene-AD12_RS12630;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AD12_RS12630;old_locus_tag=AD12_2092 NZ_JJLK01000064.1 Protein Homology CDS 44623 44811 . - 0 ID=cds-WP_001296104.1;Parent=gene-AD12_RS12630;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AD12_RS12630;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 44911 45321 . - . ID=gene-AD12_RS12625;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AD12_RS12625;old_locus_tag=AD12_2093 NZ_JJLK01000064.1 Protein Homology CDS 44911 45321 . - 0 ID=cds-WP_000637982.1;Parent=gene-AD12_RS12625;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AD12_RS12625;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 45318 48374 . - . ID=gene-AD12_RS12620;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AD12_RS12620;old_locus_tag=AD12_2094 NZ_JJLK01000064.1 Protein Homology CDS 45318 48374 . - 0 ID=cds-WP_000612968.1;Parent=gene-AD12_RS12620;Dbxref=GenBank:WP_000612968.1;Name=WP_000612968.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310421.1;locus_tag=AD12_RS12620;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612968.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 48763 49875 . + . ID=gene-AD12_RS12615;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AD12_RS12615;old_locus_tag=AD12_2095 NZ_JJLK01000064.1 Protein Homology CDS 48763 49875 . + 0 ID=cds-WP_000248636.1;Parent=gene-AD12_RS12615;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AD12_RS12615;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 50061 50168 . + . ID=gene-AD12_RS25795;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AD12_RS25795 NZ_JJLK01000064.1 cmsearch antisense_RNA 50061 50168 . + . ID=rna-AD12_RS25795;Parent=gene-AD12_RS25795;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25795;product=antisense sRNA RprA NZ_JJLK01000064.1 cmsearch exon 50061 50168 . + . ID=exon-AD12_RS25795-1;Parent=rna-AD12_RS25795;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25795;product=antisense sRNA RprA NZ_JJLK01000064.1 RefSeq gene 50304 50660 . + . ID=gene-AD12_RS12610;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AD12_RS12610;old_locus_tag=AD12_2096 NZ_JJLK01000064.1 Protein Homology CDS 50304 50660 . + 0 ID=cds-WP_001310864.1;Parent=gene-AD12_RS12610;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AD12_RS12610;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 50760 51974 . + . ID=gene-AD12_RS12605;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AD12_RS12605;old_locus_tag=AD12_2097 NZ_JJLK01000064.1 Protein Homology CDS 50760 51974 . + 0 ID=cds-WP_000795563.1;Parent=gene-AD12_RS12605;Dbxref=GenBank:WP_000795563.1;Name=WP_000795563.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310424.1;locus_tag=AD12_RS12605;product=MFS transporter;protein_id=WP_000795563.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 52201 53466 . + . ID=gene-AD12_RS12600;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AD12_RS12600;old_locus_tag=AD12_2098 NZ_JJLK01000064.1 Protein Homology CDS 52201 53466 . + 0 ID=cds-WP_032286482.1;Parent=gene-AD12_RS12600;Dbxref=GenBank:WP_032286482.1;Name=WP_032286482.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AD12_RS12600;product=MFS transporter;protein_id=WP_032286482.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 53478 54344 . + . ID=gene-AD12_RS12595;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AD12_RS12595;old_locus_tag=AD12_2099 NZ_JJLK01000064.1 Protein Homology CDS 53478 54344 . + 0 ID=cds-WP_000383469.1;Parent=gene-AD12_RS12595;Dbxref=GenBank:WP_000383469.1;Name=WP_000383469.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AD12_RS12595;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 54375 55133 . + . ID=gene-AD12_RS12590;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AD12_RS12590;old_locus_tag=AD12_2100 NZ_JJLK01000064.1 Protein Homology CDS 54375 55133 . + 0 ID=cds-WP_000860181.1;Parent=gene-AD12_RS12590;Dbxref=GenBank:WP_000860181.1;Name=WP_000860181.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310427.1;locus_tag=AD12_RS12590;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860181.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 55278 56873 . + . ID=gene-AD12_RS12585;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AD12_RS12585;old_locus_tag=AD12_2101 NZ_JJLK01000064.1 Protein Homology CDS 55278 56873 . + 0 ID=cds-WP_000805691.1;Parent=gene-AD12_RS12585;Dbxref=GenBank:WP_000805691.1;Name=WP_000805691.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AD12_RS12585;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805691.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 56887 58038 . + . ID=gene-AD12_RS12580;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AD12_RS12580;old_locus_tag=AD12_2102 NZ_JJLK01000064.1 Protein Homology CDS 56887 58038 . + 0 ID=cds-WP_000347850.1;Parent=gene-AD12_RS12580;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AD12_RS12580;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 58081 58992 . - . ID=gene-AD12_RS12575;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=AD12_RS12575;old_locus_tag=AD12_2103 NZ_JJLK01000064.1 Protein Homology CDS 58081 58992 . - 0 ID=cds-WP_000284799.1;Parent=gene-AD12_RS12575;Dbxref=GenBank:WP_000284799.1;Name=WP_000284799.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416211.1;locus_tag=AD12_RS12575;product=AraC family transcriptional regulator;protein_id=WP_000284799.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 59308 60072 . + . ID=gene-AD12_RS12565;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AD12_RS12565;old_locus_tag=AD12_2105 NZ_JJLK01000064.1 Protein Homology CDS 59308 60072 . + 0 ID=cds-WP_000692169.1;Parent=gene-AD12_RS12565;Dbxref=GenBank:WP_000692169.1;Name=WP_000692169.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=AD12_RS12565;product=electron transfer flavoprotein;protein_id=WP_000692169.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 60092 61030 . + . ID=gene-AD12_RS12560;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AD12_RS12560;old_locus_tag=AD12_2106 NZ_JJLK01000064.1 Protein Homology CDS 60092 61030 . + 0 ID=cds-WP_032286483.1;Parent=gene-AD12_RS12560;Dbxref=GenBank:WP_032286483.1;Name=WP_032286483.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310432.1;locus_tag=AD12_RS12560;product=electron transfer flavoprotein subunit alpha;protein_id=WP_032286483.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 61086 62375 . + . ID=gene-AD12_RS12555;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AD12_RS12555;old_locus_tag=AD12_2107 NZ_JJLK01000064.1 Protein Homology CDS 61086 62375 . + 0 ID=cds-WP_001278502.1;Parent=gene-AD12_RS12555;Dbxref=GenBank:WP_001278502.1;Name=WP_001278502.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310433.1;locus_tag=AD12_RS12555;product=FAD-dependent oxidoreductase;protein_id=WP_001278502.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 62372 62665 . + . ID=gene-AD12_RS12550;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AD12_RS12550;old_locus_tag=AD12_2108 NZ_JJLK01000064.1 Protein Homology CDS 62372 62665 . + 0 ID=cds-WP_000081071.1;Parent=gene-AD12_RS12550;Dbxref=GenBank:WP_000081071.1;Name=WP_000081071.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=AD12_RS12550;product=ferredoxin family protein;protein_id=WP_000081071.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 62722 64368 . + . ID=gene-AD12_RS12545;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AD12_RS12545;old_locus_tag=AD12_2109 NZ_JJLK01000064.1 Protein Homology CDS 62722 64368 . + 0 ID=cds-WP_001356268.1;Parent=gene-AD12_RS12545;Dbxref=GenBank:WP_001356268.1;Name=WP_001356268.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AD12_RS12545;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001356268.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 64425 66803 . - . ID=gene-AD12_RS12540;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AD12_RS12540;old_locus_tag=AD12_2110 NZ_JJLK01000064.1 Protein Homology CDS 64425 66803 . - 0 ID=cds-WP_000069386.1;Parent=gene-AD12_RS12540;Dbxref=GenBank:WP_000069386.1;Name=WP_000069386.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AD12_RS12540;product=phosphoenolpyruvate synthase;protein_id=WP_000069386.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 67136 67969 . + . ID=gene-AD12_RS12530;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AD12_RS12530;old_locus_tag=AD12_2112 NZ_JJLK01000064.1 Protein Homology CDS 67136 67969 . + 0 ID=cds-WP_000426520.1;Parent=gene-AD12_RS12530;Dbxref=GenBank:WP_000426520.1;Name=WP_000426520.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AD12_RS12530;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000426520.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 68126 69172 . + . ID=gene-AD12_RS12525;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AD12_RS12525;old_locus_tag=AD12_2113 NZ_JJLK01000064.1 Protein Homology CDS 68126 69172 . + 0 ID=cds-WP_032286484.1;Parent=gene-AD12_RS12525;Dbxref=GenBank:WP_032286484.1;Name=WP_032286484.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=AD12_RS12525;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_032286484.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 69304 69495 . + . ID=gene-AD12_RS12520;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AD12_RS12520;old_locus_tag=AD12_2114 NZ_JJLK01000064.1 Protein Homology CDS 69304 69495 . + 0 ID=cds-WP_001270809.1;Parent=gene-AD12_RS12520;Dbxref=GenBank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AD12_RS12520;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 69499 70935 . - . ID=gene-AD12_RS12515;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AD12_RS12515;old_locus_tag=AD12_2115 NZ_JJLK01000064.1 Protein Homology CDS 69499 70935 . - 0 ID=cds-WP_000175705.1;Parent=gene-AD12_RS12515;Dbxref=GenBank:WP_000175705.1;Name=WP_000175705.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416221.1;locus_tag=AD12_RS12515;product=protein adenylyltransferase SelO;protein_id=WP_000175705.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 70998 71711 . - . ID=gene-AD12_RS12510;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AD12_RS12510;old_locus_tag=AD12_2116 NZ_JJLK01000064.1 Protein Homology CDS 70998 71711 . - 0 ID=cds-WP_001300634.1;Parent=gene-AD12_RS12510;Dbxref=GenBank:WP_001300634.1;Name=WP_001300634.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AD12_RS12510;product=anti-FlhDC factor;protein_id=WP_001300634.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 71958 72422 . - . ID=gene-AD12_RS12505;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AD12_RS12505;old_locus_tag=AD12_2117 NZ_JJLK01000064.1 Protein Homology CDS 71958 72422 . - 0 ID=cds-WP_001209795.1;Parent=gene-AD12_RS12505;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AD12_RS12505;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 72500 73249 . - . ID=gene-AD12_RS12500;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AD12_RS12500;old_locus_tag=AD12_2118 NZ_JJLK01000064.1 Protein Homology CDS 72500 73249 . - 0 ID=cds-WP_000029479.1;Parent=gene-AD12_RS12500;Dbxref=GenBank:WP_000029479.1;Name=WP_000029479.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AD12_RS12500;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029479.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 73249 73800 . - . ID=gene-AD12_RS12495;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AD12_RS12495;old_locus_tag=AD12_2119 NZ_JJLK01000064.1 Protein Homology CDS 73249 73800 . - 0 ID=cds-WP_001154187.1;Parent=gene-AD12_RS12495;Dbxref=GenBank:WP_001154187.1;Name=WP_001154187.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310444.1;locus_tag=AD12_RS12495;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154187.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 73863 74843 . - . ID=gene-AD12_RS12490;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AD12_RS12490;old_locus_tag=AD12_2120 NZ_JJLK01000064.1 Protein Homology CDS 73863 74843 . - 0 ID=cds-WP_000956529.1;Parent=gene-AD12_RS12490;Dbxref=GenBank:WP_000956529.1;Name=WP_000956529.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AD12_RS12490;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956529.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 74944 75243 . - . ID=gene-AD12_RS12485;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AD12_RS12485;old_locus_tag=AD12_2121 NZ_JJLK01000064.1 Protein Homology CDS 74944 75243 . - 0 ID=cds-WP_001229265.1;Parent=gene-AD12_RS12485;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AD12_RS12485;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 75248 77635 . - . ID=gene-AD12_RS12480;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AD12_RS12480;old_locus_tag=AD12_2122 NZ_JJLK01000064.1 Protein Homology CDS 75248 77635 . - 0 ID=cds-WP_000672359.1;Parent=gene-AD12_RS12480;Dbxref=GenBank:WP_000672359.1;Name=WP_000672359.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AD12_RS12480;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672359.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 77650 78633 . - . ID=gene-AD12_RS12475;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AD12_RS12475;old_locus_tag=AD12_2123 NZ_JJLK01000064.1 Protein Homology CDS 77650 78633 . - 0 ID=cds-WP_000018596.1;Parent=gene-AD12_RS12475;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AD12_RS12475;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JJLK01000064.1 cmsearch sequence_feature 78843 78967 . - . ID=id-NZ_JJLK01000064.1:78843..78967;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000064.1 RefSeq gene 78917 78961 . - . ID=gene-AD12_RS28700;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AD12_RS28700 NZ_JJLK01000064.1 Protein Homology CDS 78917 78961 . - 0 ID=cds-WP_001386830.1;Parent=gene-AD12_RS28700;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AD12_RS28700;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 79084 79440 . - . ID=gene-AD12_RS12470;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AD12_RS12470;old_locus_tag=AD12_2125 NZ_JJLK01000064.1 Protein Homology CDS 79084 79440 . - 0 ID=cds-WP_000124850.1;Parent=gene-AD12_RS12470;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AD12_RS12470;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 79493 79690 . - . ID=gene-AD12_RS12465;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AD12_RS12465;old_locus_tag=AD12_2126 NZ_JJLK01000064.1 Protein Homology CDS 79493 79690 . - 0 ID=cds-WP_001124225.1;Parent=gene-AD12_RS12465;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AD12_RS12465;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 79787 80329 . - . ID=gene-AD12_RS0123960;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AD12_RS0123960 NZ_JJLK01000064.1 Protein Homology CDS 79787 80329 . - 0 ID=cds-WP_001700733.1;Parent=gene-AD12_RS0123960;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AD12_RS0123960;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 80333 82261 . - . ID=gene-AD12_RS12460;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AD12_RS12460;old_locus_tag=AD12_2128 NZ_JJLK01000064.1 Protein Homology CDS 80333 82261 . - 0 ID=cds-WP_001144208.1;Parent=gene-AD12_RS12460;Dbxref=GenBank:WP_001144208.1;Name=WP_001144208.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AD12_RS12460;product=threonine--tRNA ligase;protein_id=WP_001144208.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 82785 84654 . + . ID=gene-AD12_RS12455;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AD12_RS12455;old_locus_tag=AD12_2129;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 82785 84654 . + 0 ID=cds-AD12_RS12455;Parent=gene-AD12_RS12455;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AD12_RS12455;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 84830 84937 . + . ID=gene-AD12_RS12450;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AD12_RS12450;old_locus_tag=AD12_2131 NZ_JJLK01000064.1 Protein Homology CDS 84830 84937 . + 0 ID=cds-WP_001142445.1;Parent=gene-AD12_RS12450;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AD12_RS12450;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 84990 85748 . - . ID=gene-AD12_RS12445;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AD12_RS12445;old_locus_tag=AD12_2132 NZ_JJLK01000064.1 Protein Homology CDS 84990 85748 . - 0 ID=cds-WP_000771396.1;Parent=gene-AD12_RS12445;Dbxref=GenBank:WP_000771396.1;Name=WP_000771396.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=AD12_RS12445;product=DUF481 domain-containing protein;protein_id=WP_000771396.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 86035 86964 . + . ID=gene-AD12_RS12440;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AD12_RS12440;old_locus_tag=AD12_2133 NZ_JJLK01000064.1 Protein Homology CDS 86035 86964 . + 0 ID=cds-WP_000251735.1;Parent=gene-AD12_RS12440;Dbxref=GenBank:WP_000251735.1;Name=WP_000251735.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707391.2;locus_tag=AD12_RS12440;product=6-phosphofructokinase II;protein_id=WP_000251735.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 87065 87355 . + . ID=gene-AD12_RS12435;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD12_RS12435;old_locus_tag=AD12_2134 NZ_JJLK01000064.1 Protein Homology CDS 87065 87355 . + 0 ID=cds-WP_000146159.1;Parent=gene-AD12_RS12435;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AD12_RS12435;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 87461 88321 . + . ID=gene-AD12_RS12430;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AD12_RS12430;old_locus_tag=AD12_2135 NZ_JJLK01000064.1 Protein Homology CDS 87461 88321 . + 0 ID=cds-WP_032286485.1;Parent=gene-AD12_RS12430;Dbxref=GenBank:WP_032286485.1;Name=WP_032286485.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=AD12_RS12430;product=fructosamine kinase family protein;protein_id=WP_032286485.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 88362 88898 . - . ID=gene-AD12_RS12425;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AD12_RS12425;old_locus_tag=AD12_2136 NZ_JJLK01000064.1 Protein Homology CDS 88362 88898 . - 0 ID=cds-WP_000222172.1;Parent=gene-AD12_RS12425;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AD12_RS12425;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 89045 89713 . + . ID=gene-AD12_RS12420;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AD12_RS12420;old_locus_tag=AD12_2137 NZ_JJLK01000064.1 Protein Homology CDS 89045 89713 . + 0 ID=cds-WP_000106834.1;Parent=gene-AD12_RS12420;Dbxref=GenBank:WP_000106834.1;Name=WP_000106834.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310460.1;locus_tag=AD12_RS12420;product=hexitol phosphatase HxpB;protein_id=WP_000106834.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 89876 90466 . + . ID=gene-AD12_RS12415;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AD12_RS12415;old_locus_tag=AD12_2138 NZ_JJLK01000064.1 Protein Homology CDS 89876 90466 . + 0 ID=cds-WP_001297653.1;Parent=gene-AD12_RS12415;Dbxref=GenBank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AD12_RS12415;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 90599 91990 . + . ID=gene-AD12_RS12410;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AD12_RS12410;old_locus_tag=AD12_2139 NZ_JJLK01000064.1 Protein Homology CDS 90599 91990 . + 0 ID=cds-WP_001010722.1;Parent=gene-AD12_RS12410;Dbxref=GenBank:WP_001010722.1;Name=WP_001010722.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=AD12_RS12410;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010722.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 91994 92797 . - . ID=gene-AD12_RS12405;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AD12_RS12405;old_locus_tag=AD12_2140 NZ_JJLK01000064.1 Protein Homology CDS 91994 92797 . - 0 ID=cds-WP_001392198.1;Parent=gene-AD12_RS12405;Dbxref=GenBank:WP_001392198.1;Name=WP_001392198.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AD12_RS12405;product=protein YdjO;protein_id=WP_001392198.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 93086 93349 . - . ID=gene-AD12_RS12400;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AD12_RS12400;old_locus_tag=AD12_2141 NZ_JJLK01000064.1 Protein Homology CDS 93086 93349 . - 0 ID=cds-WP_001241561.1;Parent=gene-AD12_RS12400;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AD12_RS12400;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 93532 95793 . + . ID=gene-AD12_RS12395;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AD12_RS12395;old_locus_tag=AD12_2142 NZ_JJLK01000064.1 Protein Homology CDS 93532 95793 . + 0 ID=cds-WP_032286486.1;Parent=gene-AD12_RS12395;Dbxref=GenBank:WP_032286486.1;Name=WP_032286486.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AD12_RS12395;product=catalase HPII;protein_id=WP_032286486.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 95840 96598 . - . ID=gene-AD12_RS12390;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AD12_RS12390;old_locus_tag=AD12_2143 NZ_JJLK01000064.1 Protein Homology CDS 95840 96598 . - 0 ID=cds-WP_000440463.1;Parent=gene-AD12_RS12390;Dbxref=GenBank:WP_000440463.1;Name=WP_000440463.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310466.1;locus_tag=AD12_RS12390;product=chitin disaccharide deacetylase;protein_id=WP_000440463.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 96611 97963 . - . ID=gene-AD12_RS12385;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AD12_RS12385;old_locus_tag=AD12_2144 NZ_JJLK01000064.1 Protein Homology CDS 96611 97963 . - 0 ID=cds-WP_000078748.1;Parent=gene-AD12_RS12385;Dbxref=GenBank:WP_000078748.1;Name=WP_000078748.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=AD12_RS12385;product=6-phospho-beta-glucosidase;protein_id=WP_000078748.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 98067 98909 . - . ID=gene-AD12_RS12380;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AD12_RS12380;old_locus_tag=AD12_2145 NZ_JJLK01000064.1 Protein Homology CDS 98067 98909 . - 0 ID=cds-WP_000983653.1;Parent=gene-AD12_RS12380;Dbxref=GenBank:WP_000983653.1;Name=WP_000983653.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AD12_RS12380;product=transcriptional regulator ChbR;protein_id=WP_000983653.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 98917 99267 . - . ID=gene-AD12_RS12375;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AD12_RS12375;old_locus_tag=AD12_2146 NZ_JJLK01000064.1 Protein Homology CDS 98917 99267 . - 0 ID=cds-WP_032286487.1;Parent=gene-AD12_RS12375;Dbxref=GenBank:WP_032286487.1;Name=WP_032286487.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AD12_RS12375;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_032286487.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 99318 100676 . - . ID=gene-AD12_RS12370;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AD12_RS12370;old_locus_tag=AD12_2147 NZ_JJLK01000064.1 Protein Homology CDS 99318 100676 . - 0 ID=cds-WP_000073021.1;Parent=gene-AD12_RS12370;Dbxref=GenBank:WP_000073021.1;Name=WP_000073021.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AD12_RS12370;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073021.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 100761 101081 . - . ID=gene-AD12_RS12365;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AD12_RS12365;old_locus_tag=AD12_2148 NZ_JJLK01000064.1 Protein Homology CDS 100761 101081 . - 0 ID=cds-WP_000412169.1;Parent=gene-AD12_RS12365;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AD12_RS12365;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 101380 101718 . - . ID=gene-AD12_RS12360;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AD12_RS12360;old_locus_tag=AD12_2149 NZ_JJLK01000064.1 Protein Homology CDS 101380 101718 . - 0 ID=cds-WP_001039044.1;Parent=gene-AD12_RS12360;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AD12_RS12360;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 101920 102747 . + . ID=gene-AD12_RS12355;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AD12_RS12355;old_locus_tag=AD12_2150 NZ_JJLK01000064.1 Protein Homology CDS 101920 102747 . + 0 ID=cds-WP_000175041.1;Parent=gene-AD12_RS12355;Dbxref=GenBank:WP_000175041.1;Name=WP_000175041.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310473.1;locus_tag=AD12_RS12355;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175041.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 102977 103864 . + . ID=gene-AD12_RS12350;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AD12_RS12350;old_locus_tag=AD12_2151 NZ_JJLK01000064.1 Protein Homology CDS 102977 103864 . + 0 ID=cds-WP_000252386.1;Parent=gene-AD12_RS12350;Dbxref=GenBank:WP_000252386.1;Name=WP_000252386.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310474.1;locus_tag=AD12_RS12350;product=excinuclease Cho;protein_id=WP_000252386.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 103824 104399 . - . ID=gene-AD12_RS0123970;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AD12_RS0123970;old_locus_tag=AD12_2152 NZ_JJLK01000064.1 Protein Homology CDS 103824 104399 . - 0 ID=cds-WP_001297807.1;Parent=gene-AD12_RS0123970;Dbxref=GenBank:WP_001297807.1;Name=WP_001297807.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AD12_RS0123970;product=environmental stress-induced protein Ves;protein_id=WP_001297807.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 104602 105087 . - . ID=gene-AD12_RS12345;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AD12_RS12345;old_locus_tag=AD12_2154 NZ_JJLK01000064.1 Protein Homology CDS 104602 105087 . - 0 ID=cds-WP_001228981.1;Parent=gene-AD12_RS12345;Dbxref=GenBank:WP_001228981.1;Name=WP_001228981.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310476.1;locus_tag=AD12_RS12345;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228981.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 105417 106385 . - . ID=gene-AD12_RS12340;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AD12_RS12340;old_locus_tag=AD12_2155 NZ_JJLK01000064.1 Protein Homology CDS 105417 106385 . - 0 ID=cds-WP_000368506.1;Parent=gene-AD12_RS12340;Dbxref=GenBank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AD12_RS12340;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 106378 107721 . - . ID=gene-AD12_RS12335;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AD12_RS12335;old_locus_tag=AD12_2156 NZ_JJLK01000064.1 Protein Homology CDS 106378 107721 . - 0 ID=cds-WP_032286489.1;Parent=gene-AD12_RS12335;Dbxref=GenBank:WP_032286489.1;Name=WP_032286489.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AD12_RS12335;product=N-succinylarginine dihydrolase;protein_id=WP_032286489.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 107718 109196 . - . ID=gene-AD12_RS12330;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AD12_RS12330;old_locus_tag=AD12_2157 NZ_JJLK01000064.1 Protein Homology CDS 107718 109196 . - 0 ID=cds-WP_000177243.1;Parent=gene-AD12_RS12330;Dbxref=GenBank:WP_000177243.1;Name=WP_000177243.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310479.1;locus_tag=AD12_RS12330;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177243.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 109193 110227 . - . ID=gene-AD12_RS12325;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AD12_RS12325;old_locus_tag=AD12_2158 NZ_JJLK01000064.1 Protein Homology CDS 109193 110227 . - 0 ID=cds-WP_000989414.1;Parent=gene-AD12_RS12325;Dbxref=GenBank:WP_000989414.1;Name=WP_000989414.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AD12_RS12325;product=arginine N-succinyltransferase;protein_id=WP_000989414.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 110224 111444 . - . ID=gene-AD12_RS12320;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AD12_RS12320;old_locus_tag=AD12_2159 NZ_JJLK01000064.1 Protein Homology CDS 110224 111444 . - 0 ID=cds-WP_000081983.1;Parent=gene-AD12_RS12320;Dbxref=GenBank:WP_000081983.1;Name=WP_000081983.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AD12_RS12320;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081983.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 111890 112696 . + . ID=gene-AD12_RS12315;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AD12_RS12315;old_locus_tag=AD12_2161 NZ_JJLK01000064.1 Protein Homology CDS 111890 112696 . + 0 ID=cds-WP_000673918.1;Parent=gene-AD12_RS12315;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AD12_RS12315;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 112863 113573 . + . ID=gene-AD12_RS12310;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AD12_RS12310;old_locus_tag=AD12_2162 NZ_JJLK01000064.1 Protein Homology CDS 112863 113573 . + 0 ID=cds-WP_001356267.1;Parent=gene-AD12_RS12310;Dbxref=GenBank:WP_001356267.1;Name=WP_001356267.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AD12_RS12310;product=TVP38/TMEM64 family protein;protein_id=WP_001356267.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 113578 114255 . + . ID=gene-AD12_RS12305;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AD12_RS12305;old_locus_tag=AD12_2163 NZ_JJLK01000064.1 Protein Homology CDS 113578 114255 . + 0 ID=cds-WP_000077941.1;Parent=gene-AD12_RS12305;Dbxref=GenBank:WP_000077941.1;Name=WP_000077941.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AD12_RS12305;product=lipoprotein YdjY;protein_id=WP_000077941.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 114270 114977 . + . ID=gene-AD12_RS12300;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AD12_RS12300;old_locus_tag=AD12_2164 NZ_JJLK01000064.1 Protein Homology CDS 114270 114977 . + 0 ID=cds-WP_000975812.1;Parent=gene-AD12_RS12300;Dbxref=GenBank:WP_000975812.1;Name=WP_000975812.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310485.1;locus_tag=AD12_RS12300;product=TVP38/TMEM64 family protein;protein_id=WP_000975812.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 114977 115525 . + . ID=gene-AD12_RS12295;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AD12_RS12295;old_locus_tag=AD12_2165 NZ_JJLK01000064.1 Protein Homology CDS 114977 115525 . + 0 ID=cds-WP_000524080.1;Parent=gene-AD12_RS12295;Dbxref=GenBank:WP_000524080.1;Name=WP_000524080.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310486.1;locus_tag=AD12_RS12295;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524080.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 115535 116701 . + . ID=gene-AD12_RS12290;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AD12_RS12290;old_locus_tag=AD12_2166 NZ_JJLK01000064.1 Protein Homology CDS 115535 116701 . + 0 ID=cds-WP_001215319.1;Parent=gene-AD12_RS12290;Dbxref=GenBank:WP_001215319.1;Name=WP_001215319.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AD12_RS12290;product=ABC transporter substrate-binding protein;protein_id=WP_001215319.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 116674 118209 . + . ID=gene-AD12_RS12285;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AD12_RS12285;old_locus_tag=AD12_2167 NZ_JJLK01000064.1 Protein Homology CDS 116674 118209 . + 0 ID=cds-WP_000224975.1;Parent=gene-AD12_RS12285;Dbxref=GenBank:WP_000224975.1;Name=WP_000224975.1;gbkey=CDS;gene=ynjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310488.2;locus_tag=AD12_RS12285;product=ABC transporter permease subunit;protein_id=WP_000224975.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 118209 118862 . + . ID=gene-AD12_RS12280;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AD12_RS12280;old_locus_tag=AD12_2168 NZ_JJLK01000064.1 Protein Homology CDS 118209 118862 . + 0 ID=cds-WP_001299561.1;Parent=gene-AD12_RS12280;Dbxref=GenBank:WP_001299561.1;Name=WP_001299561.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310489.1;locus_tag=AD12_RS12280;product=ATP-binding cassette domain-containing protein;protein_id=WP_001299561.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 118929 120236 . + . ID=gene-AD12_RS12275;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AD12_RS12275;old_locus_tag=AD12_2169 NZ_JJLK01000064.1 Protein Homology CDS 118929 120236 . + 0 ID=cds-WP_001297658.1;Parent=gene-AD12_RS12275;Dbxref=GenBank:WP_001297658.1;Name=WP_001297658.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AD12_RS12275;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001297658.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 120245 120865 . - . ID=gene-AD12_RS12270;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AD12_RS12270;old_locus_tag=AD12_2170 NZ_JJLK01000064.1 Protein Homology CDS 120245 120865 . - 0 ID=cds-WP_001307237.1;Parent=gene-AD12_RS12270;Dbxref=GenBank:WP_001307237.1;Name=WP_001307237.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707357.2;locus_tag=AD12_RS12270;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001307237.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 120952 121359 . + . ID=gene-AD12_RS12265;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AD12_RS12265;old_locus_tag=AD12_2171 NZ_JJLK01000064.1 Protein Homology CDS 120952 121359 . + 0 ID=cds-WP_000781893.1;Parent=gene-AD12_RS12265;Dbxref=GenBank:WP_000781893.1;Name=WP_000781893.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AD12_RS12265;product=CTP pyrophosphohydrolase;protein_id=WP_000781893.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 121325 121597 . - . ID=gene-AD12_RS12260;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AD12_RS12260;old_locus_tag=AD12_2172 NZ_JJLK01000064.1 Protein Homology CDS 121325 121597 . - 0 ID=cds-WP_000085233.1;Parent=gene-AD12_RS12260;Dbxref=GenBank:WP_000085233.1;Name=WP_000085233.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AD12_RS12260;product=YnjH family protein;protein_id=WP_000085233.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 121833 123176 . + . ID=gene-AD12_RS12255;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AD12_RS12255;old_locus_tag=AD12_2173 NZ_JJLK01000064.1 Protein Homology CDS 121833 123176 . + 0 ID=cds-WP_032221104.1;Parent=gene-AD12_RS12255;Dbxref=GenBank:WP_032221104.1;Name=WP_032221104.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=AD12_RS12255;product=NADP-specific glutamate dehydrogenase;protein_id=WP_032221104.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 123293 124333 . - . ID=gene-AD12_RS0123975;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=protein_coding;locus_tag=AD12_RS0123975;old_locus_tag=AD12_2174 NZ_JJLK01000064.1 Protein Homology CDS 123293 124333 . - 0 ID=cds-WP_000756943.1;Parent=gene-AD12_RS0123975;Dbxref=GenBank:WP_000756943.1;Name=WP_000756943.1;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AD12_RS0123975;product=DUF1266 domain-containing protein;protein_id=WP_000756943.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 124461 126422 . - . ID=gene-AD12_RS12250;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AD12_RS12250;old_locus_tag=AD12_2175 NZ_JJLK01000064.1 Protein Homology CDS 124461 126422 . - 0 ID=cds-WP_032286490.1;Parent=gene-AD12_RS12250;Dbxref=GenBank:WP_032286490.1;Name=WP_032286490.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AD12_RS12250;product=DNA topoisomerase III;protein_id=WP_032286490.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 126427 127470 . - . ID=gene-AD12_RS12245;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AD12_RS12245;old_locus_tag=AD12_2176 NZ_JJLK01000064.1 Protein Homology CDS 126427 127470 . - 0 ID=cds-WP_001297659.1;Parent=gene-AD12_RS12245;Dbxref=GenBank:WP_001297659.1;Name=WP_001297659.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310497.1;locus_tag=AD12_RS12245;product=selenide%2C water dikinase SelD;protein_id=WP_001297659.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 127587 128138 . - . ID=gene-AD12_RS12240;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AD12_RS12240;old_locus_tag=AD12_2177 NZ_JJLK01000064.1 Protein Homology CDS 127587 128138 . - 0 ID=cds-WP_000339283.1;Parent=gene-AD12_RS12240;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AD12_RS12240;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 128299 130155 . + . ID=gene-AD12_RS12235;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AD12_RS12235;old_locus_tag=AD12_2178 NZ_JJLK01000064.1 Protein Homology CDS 128299 130155 . + 0 ID=cds-WP_001259824.1;Parent=gene-AD12_RS12235;Dbxref=GenBank:WP_001259824.1;Name=WP_001259824.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707347.2;locus_tag=AD12_RS12235;product=signal peptide peptidase SppA;protein_id=WP_001259824.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 130322 131338 . + . ID=gene-AD12_RS12230;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AD12_RS12230;old_locus_tag=AD12_2179 NZ_JJLK01000064.1 Protein Homology CDS 130322 131338 . + 0 ID=cds-WP_001170162.1;Parent=gene-AD12_RS12230;Dbxref=GenBank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AD12_RS12230;product=asparaginase;protein_id=WP_001170162.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 131349 131990 . + . ID=gene-AD12_RS12225;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AD12_RS12225;old_locus_tag=AD12_2180 NZ_JJLK01000064.1 Protein Homology CDS 131349 131990 . + 0 ID=cds-WP_001120535.1;Parent=gene-AD12_RS12225;Dbxref=GenBank:WP_001120535.1;Name=WP_001120535.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310502.2;locus_tag=AD12_RS12225;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001120535.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 132151 132423 . - . ID=gene-AD12_RS12220;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AD12_RS12220;old_locus_tag=AD12_2181 NZ_JJLK01000064.1 Protein Homology CDS 132151 132423 . - 0 ID=cds-WP_001046790.1;Parent=gene-AD12_RS12220;Dbxref=GenBank:WP_001046790.1;Name=WP_001046790.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707337.2;locus_tag=AD12_RS12220;product=YeaC family protein;protein_id=WP_001046790.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 132465 132878 . - . ID=gene-AD12_RS12215;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AD12_RS12215;old_locus_tag=AD12_2182 NZ_JJLK01000064.1 Protein Homology CDS 132465 132878 . - 0 ID=cds-WP_001284613.1;Parent=gene-AD12_RS12215;Dbxref=GenBank:WP_001284613.1;Name=WP_001284613.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707336.1;locus_tag=AD12_RS12215;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284613.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 133220 134215 . + . ID=gene-AD12_RS12210;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AD12_RS12210;old_locus_tag=AD12_2183 NZ_JJLK01000064.1 Protein Homology CDS 133220 134215 . + 0 ID=cds-WP_000153502.1;Parent=gene-AD12_RS12210;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AD12_RS12210;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 134299 135183 . + . ID=gene-AD12_RS12205;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AD12_RS12205;old_locus_tag=AD12_2184 NZ_JJLK01000064.1 Protein Homology CDS 134299 135183 . + 0 ID=cds-WP_032286491.1;Parent=gene-AD12_RS12205;Dbxref=GenBank:WP_032286491.1;Name=WP_032286491.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AD12_RS12205;product=D-hexose-6-phosphate mutarotase;protein_id=WP_032286491.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 135234 136088 . - . ID=gene-AD12_RS12200;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AD12_RS12200;old_locus_tag=AD12_2185 NZ_JJLK01000064.1 Protein Homology CDS 135234 136088 . - 0 ID=cds-WP_001186365.1;Parent=gene-AD12_RS12200;Dbxref=GenBank:WP_001186365.1;Name=WP_001186365.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310517.1;locus_tag=AD12_RS12200;product=methylglyoxal reductase YeaE;protein_id=WP_001186365.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 136178 136924 . - . ID=gene-AD12_RS12195;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AD12_RS12195;old_locus_tag=AD12_2186 NZ_JJLK01000064.1 Protein Homology CDS 136178 136924 . - 0 ID=cds-WP_000163771.1;Parent=gene-AD12_RS12195;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AD12_RS12195;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 137360 139294 . + . ID=gene-AD12_RS12190;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AD12_RS12190;old_locus_tag=AD12_2187 NZ_JJLK01000064.1 Protein Homology CDS 137360 139294 . + 0 ID=cds-WP_001019882.1;Parent=gene-AD12_RS12190;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AD12_RS12190;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 139407 140690 . + . ID=gene-AD12_RS12185;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AD12_RS12185;old_locus_tag=AD12_2188 NZ_JJLK01000064.1 Protein Homology CDS 139407 140690 . + 0 ID=cds-WP_000219686.1;Parent=gene-AD12_RS12185;Dbxref=GenBank:WP_000219686.1;Name=WP_000219686.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=AD12_RS12185;product=YeaH/YhbH family protein;protein_id=WP_000219686.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 140837 142312 . + . ID=gene-AD12_RS12180;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AD12_RS12180;old_locus_tag=AD12_2189 NZ_JJLK01000064.1 Protein Homology CDS 140837 142312 . + 0 ID=cds-WP_000616433.1;Parent=gene-AD12_RS12180;Dbxref=GenBank:WP_000616433.1;Name=WP_000616433.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AD12_RS12180;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616433.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 142493 143983 . + . ID=gene-AD12_RS12175;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AD12_RS12175;old_locus_tag=AD12_2190 NZ_JJLK01000064.1 Protein Homology CDS 142493 143983 . + 0 ID=cds-WP_001295489.1;Parent=gene-AD12_RS12175;Dbxref=GenBank:WP_001295489.1;Name=WP_001295489.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AD12_RS12175;product=diguanylate cyclase DgcJ;protein_id=WP_001295489.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 144026 144529 . + . ID=gene-AD12_RS12170;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AD12_RS12170;old_locus_tag=AD12_2191 NZ_JJLK01000064.1 Protein Homology CDS 144026 144529 . + 0 ID=cds-WP_000138052.1;Parent=gene-AD12_RS12170;Dbxref=GenBank:WP_000138052.1;Name=WP_000138052.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AD12_RS12170;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138052.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 144530 144634 . - . ID=gene-AD12_RS12165;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AD12_RS12165;old_locus_tag=AD12_2192 NZ_JJLK01000064.1 Protein Homology CDS 144530 144634 . - 0 ID=cds-WP_000999630.1;Parent=gene-AD12_RS12165;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AD12_RS12165;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 144804 145250 . + . ID=gene-AD12_RS12160;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AD12_RS12160;old_locus_tag=AD12_2194 NZ_JJLK01000064.1 Protein Homology CDS 144804 145250 . + 0 ID=cds-WP_000460707.1;Parent=gene-AD12_RS12160;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AD12_RS12160;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 145207 146028 . - . ID=gene-AD12_RS12155;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AD12_RS12155;old_locus_tag=AD12_2195 NZ_JJLK01000064.1 Protein Homology CDS 145207 146028 . - 0 ID=cds-WP_000972239.1;Parent=gene-AD12_RS12155;Dbxref=GenBank:WP_000972239.1;Name=WP_000972239.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AD12_RS12155;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972239.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 146125 147306 . + . ID=gene-AD12_RS12150;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AD12_RS12150;old_locus_tag=AD12_2196 NZ_JJLK01000064.1 Protein Homology CDS 146125 147306 . + 0 ID=cds-WP_000128469.1;Parent=gene-AD12_RS12150;Dbxref=GenBank:WP_000128469.1;Name=WP_000128469.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310527.1;locus_tag=AD12_RS12150;product=2-nitroimidazole transporter;protein_id=WP_000128469.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 147361 147708 . + . ID=gene-AD12_RS12145;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AD12_RS12145;old_locus_tag=AD12_2197 NZ_JJLK01000064.1 Protein Homology CDS 147361 147708 . + 0 ID=cds-WP_001295490.1;Parent=gene-AD12_RS12145;Dbxref=GenBank:WP_001295490.1;Name=WP_001295490.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AD12_RS12145;product=DUF488 domain-containing protein;protein_id=WP_001295490.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 147730 147984 . - . ID=gene-AD12_RS12140;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AD12_RS12140;old_locus_tag=AD12_2198 NZ_JJLK01000064.1 Protein Homology CDS 147730 147984 . - 0 ID=cds-WP_000691930.1;Parent=gene-AD12_RS12140;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AD12_RS12140;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 148167 149192 . + . ID=gene-AD12_RS12135;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AD12_RS12135;old_locus_tag=AD12_2199 NZ_JJLK01000064.1 Protein Homology CDS 148167 149192 . + 0 ID=cds-WP_001306169.1;Parent=gene-AD12_RS12135;Dbxref=GenBank:WP_001306169.1;Name=WP_001306169.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AD12_RS12135;product=diguanylate cyclase DgcP;protein_id=WP_001306169.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 149225 149323 . + . ID=gene-AD12_RS0123990;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AD12_RS0123990 NZ_JJLK01000064.1 Protein Homology CDS 149225 149323 . + 0 ID=cds-WP_001219350.1;Parent=gene-AD12_RS0123990;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AD12_RS0123990;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 149326 149400 . + . ID=gene-AD12_RS28025;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AD12_RS28025 NZ_JJLK01000064.1 Protein Homology CDS 149326 149400 . + 0 ID=cds-WP_001386836.1;Parent=gene-AD12_RS28025;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AD12_RS28025;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 149459 149707 . - . ID=gene-AD12_RS12130;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AD12_RS12130;old_locus_tag=AD12_2201 NZ_JJLK01000064.1 Protein Homology CDS 149459 149707 . - 0 ID=cds-WP_000512153.1;Parent=gene-AD12_RS12130;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AD12_RS12130;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 149855 150037 . - . ID=gene-AD12_RS12125;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AD12_RS12125;old_locus_tag=AD12_2202 NZ_JJLK01000064.1 Protein Homology CDS 149855 150037 . - 0 ID=cds-WP_000513737.1;Parent=gene-AD12_RS12125;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AD12_RS12125;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 150041 150400 . - . ID=gene-AD12_RS12120;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AD12_RS12120;old_locus_tag=AD12_2203 NZ_JJLK01000064.1 Protein Homology CDS 150041 150400 . - 0 ID=cds-WP_000939312.1;Parent=gene-AD12_RS12120;Dbxref=GenBank:WP_000939312.1;Name=WP_000939312.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AD12_RS12120;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939312.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 150573 151211 . - . ID=gene-AD12_RS12115;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AD12_RS12115;old_locus_tag=AD12_2205 NZ_JJLK01000064.1 Protein Homology CDS 150573 151211 . - 0 ID=cds-WP_000457207.1;Parent=gene-AD12_RS12115;Dbxref=GenBank:WP_000457207.1;Name=WP_000457207.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AD12_RS12115;product=leucine efflux protein LeuE;protein_id=WP_000457207.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 151338 152261 . - . ID=gene-AD12_RS12110;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AD12_RS12110;old_locus_tag=AD12_2206 NZ_JJLK01000064.1 Protein Homology CDS 151338 152261 . - 0 ID=cds-WP_001061578.1;Parent=gene-AD12_RS12110;Dbxref=GenBank:WP_001061578.1;Name=WP_001061578.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AD12_RS12110;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001061578.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 152364 153449 . + . ID=gene-AD12_RS12105;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AD12_RS12105;old_locus_tag=AD12_2207 NZ_JJLK01000064.1 Protein Homology CDS 152364 153449 . + 0 ID=cds-WP_000978494.1;Parent=gene-AD12_RS12105;Dbxref=GenBank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AD12_RS12105;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 153700 155310 . + . ID=gene-AD12_RS12100;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=protein_coding;locus_tag=AD12_RS12100;old_locus_tag=AD12_2208 NZ_JJLK01000064.1 Protein Homology CDS 153700 155310 . + 0 ID=cds-WP_000987525.1;Parent=gene-AD12_RS12100;Dbxref=GenBank:WP_000987525.1;Name=WP_000987525.1;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AD12_RS12100;product=BCCT family transporter YeaV;protein_id=WP_000987525.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 155342 156466 . + . ID=gene-AD12_RS12095;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AD12_RS12095;old_locus_tag=AD12_2209 NZ_JJLK01000064.1 Protein Homology CDS 155342 156466 . + 0 ID=cds-WP_000067828.1;Parent=gene-AD12_RS12095;Dbxref=GenBank:WP_000067828.1;Name=WP_000067828.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AD12_RS12095;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_000067828.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 156522 157487 . + . ID=gene-AD12_RS12090;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AD12_RS12090;old_locus_tag=AD12_2210 NZ_JJLK01000064.1 Protein Homology CDS 156522 157487 . + 0 ID=cds-WP_001286998.1;Parent=gene-AD12_RS12090;Dbxref=GenBank:WP_001286998.1;Name=WP_001286998.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AD12_RS12090;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_001286998.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 157541 158656 . - . ID=gene-AD12_RS12085;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AD12_RS12085;old_locus_tag=AD12_2211 NZ_JJLK01000064.1 Protein Homology CDS 157541 158656 . - 0 ID=cds-WP_001323996.1;Parent=gene-AD12_RS12085;Dbxref=GenBank:WP_001323996.1;Name=WP_001323996.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310540.2;locus_tag=AD12_RS12085;product=ribonuclease D;protein_id=WP_001323996.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 158738 160423 . - . ID=gene-AD12_RS12080;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AD12_RS12080;old_locus_tag=AD12_2212 NZ_JJLK01000064.1 Protein Homology CDS 158738 160423 . - 0 ID=cds-WP_000758422.1;Parent=gene-AD12_RS12080;Dbxref=GenBank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AD12_RS12080;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 160628 161209 . - . ID=gene-AD12_RS12075;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AD12_RS12075;old_locus_tag=AD12_2213 NZ_JJLK01000064.1 Protein Homology CDS 160628 161209 . - 0 ID=cds-WP_000290576.1;Parent=gene-AD12_RS12075;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AD12_RS12075;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 161249 161944 . - . ID=gene-AD12_RS12070;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AD12_RS12070;old_locus_tag=AD12_2214 NZ_JJLK01000064.1 Protein Homology CDS 161249 161944 . - 0 ID=cds-WP_001220987.1;Parent=gene-AD12_RS12070;Dbxref=GenBank:WP_001220987.1;Name=WP_001220987.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310543.1;locus_tag=AD12_RS12070;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220987.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 162002 163912 . - . ID=gene-AD12_RS12065;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AD12_RS12065;old_locus_tag=AD12_2215 NZ_JJLK01000064.1 Protein Homology CDS 162002 163912 . - 0 ID=cds-WP_000128847.1;Parent=gene-AD12_RS12065;Dbxref=GenBank:WP_000128847.1;Name=WP_000128847.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AD12_RS12065;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 164044 164388 . + . ID=gene-AD12_RS12060;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AD12_RS12060;old_locus_tag=AD12_2216 NZ_JJLK01000064.1 Protein Homology CDS 164044 164388 . + 0 ID=cds-WP_001295493.1;Parent=gene-AD12_RS12060;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AD12_RS12060;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 164811 165110 . + . ID=gene-AD12_RS12055;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=AD12_RS12055;old_locus_tag=AD12_2218 NZ_JJLK01000064.1 Protein Homology CDS 164811 165110 . + 0 ID=cds-WP_001111995.1;Parent=gene-AD12_RS12055;Dbxref=GenBank:WP_001111995.1;Name=WP_001111995.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AD12_RS12055;product=DUF1889 family protein;protein_id=WP_001111995.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 165230 165409 . - . ID=gene-AD12_RS12050;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AD12_RS12050;old_locus_tag=AD12_2219 NZ_JJLK01000064.1 Protein Homology CDS 165230 165409 . - 0 ID=cds-WP_000457334.1;Parent=gene-AD12_RS12050;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AD12_RS12050;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 165483 166844 . + . ID=gene-AD12_RS12045;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AD12_RS12045;old_locus_tag=AD12_2220 NZ_JJLK01000064.1 Protein Homology CDS 165483 166844 . + 0 ID=cds-WP_032286492.1;Parent=gene-AD12_RS12045;Dbxref=GenBank:WP_032286492.1;Name=WP_032286492.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AD12_RS12045;product=aminodeoxychorismate synthase component 1;protein_id=WP_032286492.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 166848 167426 . + . ID=gene-AD12_RS12040;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AD12_RS12040;old_locus_tag=AD12_2221 NZ_JJLK01000064.1 Protein Homology CDS 166848 167426 . + 0 ID=cds-WP_000456740.1;Parent=gene-AD12_RS12040;Dbxref=GenBank:WP_000456740.1;Name=WP_000456740.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310549.1;locus_tag=AD12_RS12040;product=CoA pyrophosphatase;protein_id=WP_000456740.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 167610 168974 . + . ID=gene-AD12_RS12035;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AD12_RS12035;old_locus_tag=AD12_2222 NZ_JJLK01000064.1 Protein Homology CDS 167610 168974 . + 0 ID=cds-WP_000624302.1;Parent=gene-AD12_RS12035;Dbxref=GenBank:WP_000624302.1;Name=WP_000624302.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AD12_RS12035;product=L-serine ammonia-lyase;protein_id=WP_000624302.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 169105 170703 . + . ID=gene-AD12_RS12030;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AD12_RS12030;old_locus_tag=AD12_2223 NZ_JJLK01000064.1 Protein Homology CDS 169105 170703 . + 0 ID=cds-WP_032286493.1;Parent=gene-AD12_RS12030;Dbxref=GenBank:WP_032286493.1;Name=WP_032286493.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AD12_RS12030;product=EAL domain-containing protein;protein_id=WP_032286493.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 170707 172257 . - . ID=gene-AD12_RS12025;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AD12_RS12025;old_locus_tag=AD12_2224 NZ_JJLK01000064.1 Protein Homology CDS 170707 172257 . - 0 ID=cds-WP_000394973.1;Parent=gene-AD12_RS12025;Dbxref=GenBank:WP_000394973.1;Name=WP_000394973.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AD12_RS12025;product=CNNM family cation transport protein YoaE;protein_id=WP_000394973.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 172245 172403 . - . ID=gene-AD12_RS29690;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AD12_RS29690 NZ_JJLK01000064.1 Protein Homology CDS 172245 172403 . - 0 ID=cds-WP_001349044.1;Parent=gene-AD12_RS29690;Dbxref=GenBank:WP_001349044.1;Name=WP_001349044.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AD12_RS29690;product=protein YoaL;protein_id=WP_001349044.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 172720 173691 . + . ID=gene-AD12_RS12020;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AD12_RS12020;old_locus_tag=AD12_2225 NZ_JJLK01000064.1 Protein Homology CDS 172720 173691 . + 0 ID=cds-WP_000150543.1;Parent=gene-AD12_RS12020;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AD12_RS12020;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 173754 174554 . + . ID=gene-AD12_RS12015;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AD12_RS12015;old_locus_tag=AD12_2226 NZ_JJLK01000064.1 Protein Homology CDS 173754 174554 . + 0 ID=cds-WP_000406926.1;Parent=gene-AD12_RS12015;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AD12_RS12015;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 174567 175418 . + . ID=gene-AD12_RS12010;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AD12_RS12010;old_locus_tag=AD12_2227 NZ_JJLK01000064.1 Protein Homology CDS 174567 175418 . + 0 ID=cds-WP_000228655.1;Parent=gene-AD12_RS12010;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AD12_RS12010;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 175473 175931 . + . ID=gene-AD12_RS0124000;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AD12_RS0124000 NZ_JJLK01000064.1 Protein Homology CDS 175473 175931 . + 0 ID=cds-WP_000156255.1;Parent=gene-AD12_RS0124000;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AD12_RS0124000;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 176360 176926 . + . ID=gene-AD12_RS12005;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AD12_RS12005;old_locus_tag=AD12_2230 NZ_JJLK01000064.1 Protein Homology CDS 176360 176926 . + 0 ID=cds-WP_001296134.1;Parent=gene-AD12_RS12005;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AD12_RS12005;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 176923 177732 . - . ID=gene-AD12_RS12000;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AD12_RS12000;old_locus_tag=AD12_2231 NZ_JJLK01000064.1 Protein Homology CDS 176923 177732 . - 0 ID=cds-WP_000010115.1;Parent=gene-AD12_RS12000;Dbxref=GenBank:WP_000010115.1;Name=WP_000010115.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AD12_RS12000;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 177898 178107 . - . ID=gene-AD12_RS11995;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD12_RS11995;old_locus_tag=AD12_2232 NZ_JJLK01000064.1 Protein Homology CDS 177898 178107 . - 0 ID=cds-WP_001062678.1;Parent=gene-AD12_RS11995;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AD12_RS11995;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 178120 178263 . - . ID=gene-AD12_RS11990;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AD12_RS11990;old_locus_tag=AD12_2233 NZ_JJLK01000064.1 Protein Homology CDS 178120 178263 . - 0 ID=cds-WP_001295496.1;Parent=gene-AD12_RS11990;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AD12_RS11990;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 178932 179219 . - . ID=gene-AD12_RS11985;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AD12_RS11985;old_locus_tag=AD12_2234 NZ_JJLK01000064.1 Protein Homology CDS 178932 179219 . - 0 ID=cds-WP_001006866.1;Parent=gene-AD12_RS11985;Dbxref=GenBank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AD12_RS11985;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 179294 179437 . - . ID=gene-AD12_RS11980;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AD12_RS11980;old_locus_tag=AD12_2235 NZ_JJLK01000064.1 Protein Homology CDS 179294 179437 . - 0 ID=cds-WP_000714550.1;Parent=gene-AD12_RS11980;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AD12_RS11980;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 179596 179835 . + . ID=gene-AD12_RS11975;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AD12_RS11975;old_locus_tag=AD12_2236 NZ_JJLK01000064.1 Protein Homology CDS 179596 179835 . + 0 ID=cds-WP_001211011.1;Parent=gene-AD12_RS11975;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AD12_RS11975;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 179978 180769 . - . ID=gene-AD12_RS11970;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AD12_RS11970;old_locus_tag=AD12_2237 NZ_JJLK01000064.1 Protein Homology CDS 179978 180769 . - 0 ID=cds-WP_001262174.1;Parent=gene-AD12_RS11970;Dbxref=GenBank:WP_001262174.1;Name=WP_001262174.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AD12_RS11970;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262174.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 180946 182319 . + . ID=gene-AD12_RS11965;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AD12_RS11965;old_locus_tag=AD12_2238 NZ_JJLK01000064.1 Protein Homology CDS 180946 182319 . + 0 ID=cds-WP_001127216.1;Parent=gene-AD12_RS11965;Dbxref=GenBank:WP_001127216.1;Name=WP_001127216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AD12_RS11965;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 182365 183246 . - . ID=gene-AD12_RS11960;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AD12_RS11960;old_locus_tag=AD12_2239 NZ_JJLK01000064.1 Protein Homology CDS 182365 183246 . - 0 ID=cds-WP_000984517.1;Parent=gene-AD12_RS11960;Dbxref=GenBank:WP_000984517.1;Name=WP_000984517.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AD12_RS11960;product=protease HtpX;protein_id=WP_000984517.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 183438 185486 . - . ID=gene-AD12_RS11955;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AD12_RS11955;old_locus_tag=AD12_2240 NZ_JJLK01000064.1 Protein Homology CDS 183438 185486 . - 0 ID=cds-WP_001315679.1;Parent=gene-AD12_RS11955;Dbxref=GenBank:WP_001315679.1;Name=WP_001315679.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AD12_RS11955;product=carboxy terminal-processing peptidase;protein_id=WP_001315679.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 185506 186204 . - . ID=gene-AD12_RS11950;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AD12_RS11950;old_locus_tag=AD12_2241 NZ_JJLK01000064.1 Protein Homology CDS 185506 186204 . - 0 ID=cds-WP_000431370.1;Parent=gene-AD12_RS11950;Dbxref=GenBank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=AD12_RS11950;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 186301 186798 . - . ID=gene-AD12_RS11945;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AD12_RS11945;old_locus_tag=AD12_2242 NZ_JJLK01000064.1 Protein Homology CDS 186301 186798 . - 0 ID=cds-WP_001043882.1;Parent=gene-AD12_RS11945;Dbxref=GenBank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=AD12_RS11945;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 186928 188211 . + . ID=gene-AD12_RS11940;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AD12_RS11940;old_locus_tag=AD12_2243 NZ_JJLK01000064.1 Protein Homology CDS 186928 188211 . + 0 ID=cds-WP_001207282.1;Parent=gene-AD12_RS11940;Dbxref=GenBank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AD12_RS11940;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 188180 190813 . + . ID=gene-AD12_RS11935;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AD12_RS11935;old_locus_tag=AD12_2244 NZ_JJLK01000064.1 Protein Homology CDS 188180 190813 . + 0 ID=cds-WP_001356288.1;Parent=gene-AD12_RS11935;Dbxref=GenBank:WP_001356288.1;Name=WP_001356288.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AD12_RS11935;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001356288.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 190892 192331 . + . ID=gene-AD12_RS11930;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AD12_RS11930;old_locus_tag=AD12_2245 NZ_JJLK01000064.1 Protein Homology CDS 190892 192331 . + 0 ID=cds-WP_000057023.1;Parent=gene-AD12_RS11930;Dbxref=GenBank:WP_000057023.1;Name=WP_000057023.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AD12_RS11930;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_000057023.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 192449 192685 . + . ID=gene-AD12_RS11925;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AD12_RS11925;old_locus_tag=AD12_2246 NZ_JJLK01000064.1 Protein Homology CDS 192449 192685 . + 0 ID=cds-WP_001295499.1;Parent=gene-AD12_RS11925;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AD12_RS11925;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 192790 192981 . + . ID=gene-AD12_RS11920;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AD12_RS11920;old_locus_tag=AD12_2247 NZ_JJLK01000064.1 Protein Homology CDS 192790 192981 . + 0 ID=cds-WP_001296140.1;Parent=gene-AD12_RS11920;Dbxref=GenBank:WP_001296140.1;Name=WP_001296140.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AD12_RS11920;product=YebW family protein;protein_id=WP_001296140.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 192982 193638 . - . ID=gene-AD12_RS11915;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AD12_RS11915;old_locus_tag=AD12_2248 NZ_JJLK01000064.1 Protein Homology CDS 192982 193638 . - 0 ID=cds-WP_000812724.1;Parent=gene-AD12_RS11915;Dbxref=GenBank:WP_000812724.1;Name=WP_000812724.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AD12_RS11915;product=protein-serine/threonine phosphatase;protein_id=WP_000812724.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 194034 194375 . - . ID=gene-AD12_RS11910;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AD12_RS11910;old_locus_tag=AD12_2249 NZ_JJLK01000064.1 Protein Homology CDS 194034 194375 . - 0 ID=cds-WP_000976492.1;Parent=gene-AD12_RS11910;Dbxref=GenBank:WP_000976492.1;Name=WP_000976492.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AD12_RS11910;product=YebY family protein;protein_id=WP_000976492.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 194388 195260 . - . ID=gene-AD12_RS11905;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AD12_RS11905;old_locus_tag=AD12_2250 NZ_JJLK01000064.1 Protein Homology CDS 194388 195260 . - 0 ID=cds-WP_000879280.1;Parent=gene-AD12_RS11905;Dbxref=GenBank:WP_000879280.1;Name=WP_000879280.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AD12_RS11905;product=copper homeostasis membrane protein CopD;protein_id=WP_000879280.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 195264 195638 . - . ID=gene-AD12_RS11900;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AD12_RS11900;old_locus_tag=AD12_2251 NZ_JJLK01000064.1 Protein Homology CDS 195264 195638 . - 0 ID=cds-WP_000204699.1;Parent=gene-AD12_RS11900;Dbxref=GenBank:WP_000204699.1;Name=WP_000204699.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AD12_RS11900;product=CopC domain-containing protein YobA;protein_id=WP_000204699.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 195777 196007 . + . ID=gene-AD12_RS11895;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AD12_RS11895;old_locus_tag=AD12_2252 NZ_JJLK01000064.1 Protein Homology CDS 195777 196007 . + 0 ID=cds-WP_000916763.1;Parent=gene-AD12_RS11895;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AD12_RS11895;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 196109 196765 . + . ID=gene-AD12_RS0124020;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AD12_RS0124020 NZ_JJLK01000064.1 Protein Homology CDS 196109 196765 . + 0 ID=cds-WP_000011658.1;Parent=gene-AD12_RS0124020;Dbxref=GenBank:WP_000011658.1;Name=WP_000011658.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AD12_RS0124020;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011658.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 196789 197451 . + . ID=gene-AD12_RS11890;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AD12_RS11890;old_locus_tag=AD12_2254 NZ_JJLK01000064.1 Protein Homology CDS 196789 197451 . + 0 ID=cds-WP_000944256.1;Parent=gene-AD12_RS11890;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AD12_RS11890;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 197448 199508 . - . ID=gene-AD12_RS11885;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AD12_RS11885;old_locus_tag=AD12_2255 NZ_JJLK01000064.1 Protein Homology CDS 197448 199508 . - 0 ID=cds-WP_032286494.1;Parent=gene-AD12_RS11885;Dbxref=GenBank:WP_032286494.1;Name=WP_032286494.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AD12_RS11885;product=oligopeptidase B;protein_id=WP_032286494.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 199717 200376 . - . ID=gene-AD12_RS11880;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AD12_RS11880;old_locus_tag=AD12_2256 NZ_JJLK01000064.1 Protein Homology CDS 199717 200376 . - 0 ID=cds-WP_000024745.1;Parent=gene-AD12_RS11880;Dbxref=GenBank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AD12_RS11880;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 200703 201059 . - . ID=gene-AD12_RS11875;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AD12_RS11875;old_locus_tag=AD12_2257 NZ_JJLK01000064.1 Protein Homology CDS 200703 201059 . - 0 ID=cds-WP_001295500.1;Parent=gene-AD12_RS11875;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AD12_RS11875;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 201126 201416 . - . ID=gene-AD12_RS11870;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AD12_RS11870;old_locus_tag=AD12_2258 NZ_JJLK01000064.1 Protein Homology CDS 201126 201416 . - 0 ID=cds-WP_000257738.1;Parent=gene-AD12_RS11870;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AD12_RS11870;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 201550 202728 . + . ID=gene-AD12_RS11865;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AD12_RS11865;old_locus_tag=AD12_2259 NZ_JJLK01000064.1 Protein Homology CDS 201550 202728 . + 0 ID=cds-WP_000173475.1;Parent=gene-AD12_RS11865;Dbxref=GenBank:WP_000173475.1;Name=WP_000173475.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=AD12_RS11865;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173475.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 202784 203425 . - . ID=gene-AD12_RS11860;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AD12_RS11860;old_locus_tag=AD12_2260 NZ_JJLK01000064.1 Protein Homology CDS 202784 203425 . - 0 ID=cds-WP_000800512.1;Parent=gene-AD12_RS11860;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AD12_RS11860;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 203462 205273 . - . ID=gene-AD12_RS11855;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AD12_RS11855;old_locus_tag=AD12_2261 NZ_JJLK01000064.1 Protein Homology CDS 203462 205273 . - 0 ID=cds-WP_001069467.1;Parent=gene-AD12_RS11855;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AD12_RS11855;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 205508 206983 . - . ID=gene-AD12_RS11850;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AD12_RS11850;old_locus_tag=AD12_2262 NZ_JJLK01000064.1 Protein Homology CDS 205508 206983 . - 0 ID=cds-WP_000301727.1;Parent=gene-AD12_RS11850;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AD12_RS11850;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 207321 208190 . + . ID=gene-AD12_RS11845;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AD12_RS11845;old_locus_tag=AD12_2263 NZ_JJLK01000064.1 Protein Homology CDS 207321 208190 . + 0 ID=cds-WP_001056694.1;Parent=gene-AD12_RS11845;Dbxref=GenBank:WP_001056694.1;Name=WP_001056694.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310590.1;locus_tag=AD12_RS11845;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056694.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 208318 209760 . + . ID=gene-AD12_RS11840;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AD12_RS11840;old_locus_tag=AD12_2264 NZ_JJLK01000064.1 Protein Homology CDS 208318 209760 . + 0 ID=cds-WP_000091176.1;Parent=gene-AD12_RS11840;Dbxref=GenBank:WP_000091176.1;Name=WP_000091176.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AD12_RS11840;product=pyruvate kinase;protein_id=WP_000091176.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 209891 210862 . - . ID=gene-AD12_RS11835;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD12_RS11835;old_locus_tag=AD12_2265 NZ_JJLK01000064.1 Protein Homology CDS 209891 210862 . - 0 ID=cds-WP_000448381.1;Parent=gene-AD12_RS11835;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AD12_RS11835;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 210982 212304 . - . ID=gene-AD12_RS11830;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AD12_RS11830;old_locus_tag=AD12_2266 NZ_JJLK01000064.1 Protein Homology CDS 210982 212304 . - 0 ID=cds-WP_001184045.1;Parent=gene-AD12_RS11830;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AD12_RS11830;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 212320 213252 . - . ID=gene-AD12_RS11825;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AD12_RS11825;old_locus_tag=AD12_2267 NZ_JJLK01000064.1 Protein Homology CDS 212320 213252 . - 0 ID=cds-WP_032286510.1;Parent=gene-AD12_RS11825;Dbxref=GenBank:WP_032286510.1;Name=WP_032286510.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AD12_RS11825;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_032286510.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 213331 214086 . + . ID=gene-AD12_RS11820;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AD12_RS11820;old_locus_tag=AD12_2268 NZ_JJLK01000064.1 Protein Homology CDS 213331 214086 . + 0 ID=cds-WP_000202996.1;Parent=gene-AD12_RS11820;Dbxref=GenBank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AD12_RS11820;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 214083 214868 . + . ID=gene-AD12_RS11815;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AD12_RS11815;old_locus_tag=AD12_2269 NZ_JJLK01000064.1 Protein Homology CDS 214083 214868 . + 0 ID=cds-WP_000571479.1;Parent=gene-AD12_RS11815;Dbxref=GenBank:WP_000571479.1;Name=WP_000571479.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AD12_RS11815;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571479.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 215015 216025 . - . ID=gene-AD12_RS11810;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AD12_RS11810;old_locus_tag=AD12_2270 NZ_JJLK01000064.1 Protein Homology CDS 215015 216025 . - 0 ID=cds-WP_000568519.1;Parent=gene-AD12_RS11810;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AD12_RS11810;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 216034 216645 . - . ID=gene-AD12_RS11805;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AD12_RS11805;old_locus_tag=AD12_2271 NZ_JJLK01000064.1 Protein Homology CDS 216034 216645 . - 0 ID=cds-WP_000580323.1;Parent=gene-AD12_RS11805;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AD12_RS11805;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 216784 216849 . - . ID=gene-AD12_RS28035;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AD12_RS28035 NZ_JJLK01000064.1 Protein Homology CDS 216784 216849 . - 0 ID=cds-WP_001386853.1;Parent=gene-AD12_RS28035;Dbxref=GenBank:WP_001386853.1;Name=WP_001386853.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AD12_RS28035;product=stress response small protein YobI;protein_id=WP_001386853.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 216920 217522 . + . ID=gene-AD12_RS11800;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AD12_RS11800;old_locus_tag=AD12_2272 NZ_JJLK01000064.1 Protein Homology CDS 216920 217522 . + 0 ID=cds-WP_001024930.1;Parent=gene-AD12_RS11800;Dbxref=GenBank:WP_001024930.1;Name=WP_001024930.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AD12_RS11800;product=YebB family permuted papain-like enzyme;protein_id=WP_001024930.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 217524 218045 . - . ID=gene-AD12_RS11795;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AD12_RS11795;old_locus_tag=AD12_2273 NZ_JJLK01000064.1 Protein Homology CDS 217524 218045 . - 0 ID=cds-WP_001295503.1;Parent=gene-AD12_RS11795;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AD12_RS11795;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 218080 218820 . - . ID=gene-AD12_RS11790;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AD12_RS11790;old_locus_tag=AD12_2274 NZ_JJLK01000064.1 Protein Homology CDS 218080 218820 . - 0 ID=cds-WP_000907248.1;Parent=gene-AD12_RS11790;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AD12_RS11790;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 218849 219301 . - . ID=gene-AD12_RS11785;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AD12_RS11785;old_locus_tag=AD12_2275 NZ_JJLK01000064.1 Protein Homology CDS 218849 219301 . - 0 ID=cds-WP_001443602.1;Parent=gene-AD12_RS11785;Dbxref=GenBank:WP_001443602.1;Name=WP_001443602.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AD12_RS11785;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001443602.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 219419 221191 . - . ID=gene-AD12_RS11780;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AD12_RS11780;old_locus_tag=AD12_2276 NZ_JJLK01000064.1 Protein Homology CDS 219419 221191 . - 0 ID=cds-WP_001258662.1;Parent=gene-AD12_RS11780;Dbxref=GenBank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AD12_RS11780;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 221501 222067 . + . ID=gene-AD12_RS11775;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AD12_RS11775;old_locus_tag=AD12_2277 NZ_JJLK01000064.1 Protein Homology CDS 221501 222067 . + 0 ID=cds-WP_023277559.1;Parent=gene-AD12_RS11775;Dbxref=GenBank:WP_023277559.1;Name=WP_023277559.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AD12_RS11775;product=hydrolase;protein_id=WP_023277559.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 222064 222882 . + . ID=gene-AD12_RS11770;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AD12_RS11770;old_locus_tag=AD12_2278 NZ_JJLK01000064.1 Protein Homology CDS 222064 222882 . + 0 ID=cds-WP_000639274.1;Parent=gene-AD12_RS11770;Dbxref=GenBank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AD12_RS11770;product=DUF72 domain-containing protein;protein_id=WP_000639274.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 222935 223330 . + . ID=gene-AD12_RS11765;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AD12_RS11765;old_locus_tag=AD12_2279 NZ_JJLK01000064.1 Protein Homology CDS 222935 223330 . + 0 ID=cds-WP_001356287.1;Parent=gene-AD12_RS11765;Dbxref=GenBank:WP_001356287.1;Name=WP_001356287.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AD12_RS11765;product=MAPEG family protein;protein_id=WP_001356287.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 223371 224114 . + . ID=gene-AD12_RS11760;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AD12_RS11760;old_locus_tag=AD12_2280 NZ_JJLK01000064.1 Protein Homology CDS 223371 224114 . + 0 ID=cds-WP_000019588.1;Parent=gene-AD12_RS11760;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AD12_RS11760;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 224111 225082 . + . ID=gene-AD12_RS11755;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AD12_RS11755;old_locus_tag=AD12_2281 NZ_JJLK01000064.1 Protein Homology CDS 224111 225082 . + 0 ID=cds-WP_000564745.1;Parent=gene-AD12_RS11755;Dbxref=GenBank:WP_000564745.1;Name=WP_000564745.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707759.1;locus_tag=AD12_RS11755;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564745.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 225247 227676 . - . ID=gene-AD12_RS11750;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AD12_RS11750;old_locus_tag=AD12_2282 NZ_JJLK01000064.1 Protein Homology CDS 225247 227676 . - 0 ID=cds-WP_000176828.1;Parent=gene-AD12_RS11750;Dbxref=GenBank:WP_000176828.1;Name=WP_000176828.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AD12_RS11750;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_000176828.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 227701 228801 . - . ID=gene-AD12_RS11745;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AD12_RS11745;old_locus_tag=AD12_2283 NZ_JJLK01000064.1 Protein Homology CDS 227701 228801 . - 0 ID=cds-WP_001214299.1;Parent=gene-AD12_RS11745;Dbxref=GenBank:WP_001214299.1;Name=WP_001214299.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=AD12_RS11745;product=NapC/NirT family cytochrome c;protein_id=WP_001214299.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 229189 229935 . - . ID=gene-AD12_RS11740;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AD12_RS11740;old_locus_tag=AD12_2284 NZ_JJLK01000064.1 Protein Homology CDS 229189 229935 . - 0 ID=cds-WP_001185741.1;Parent=gene-AD12_RS11740;Dbxref=GenBank:WP_001185741.1;Name=WP_001185741.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025309.2;locus_tag=AD12_RS11740;product=copper homeostasis protein CutC;protein_id=WP_001185741.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 229949 230515 . - . ID=gene-AD12_RS11735;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AD12_RS11735;old_locus_tag=AD12_2285 NZ_JJLK01000064.1 Protein Homology CDS 229949 230515 . - 0 ID=cds-WP_001295504.1;Parent=gene-AD12_RS11735;Dbxref=GenBank:WP_001295504.1;Name=WP_001295504.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AD12_RS11735;product=VOC family protein;protein_id=WP_001295504.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 230731 232464 . + . ID=gene-AD12_RS11730;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AD12_RS11730;old_locus_tag=AD12_2286 NZ_JJLK01000064.1 Protein Homology CDS 230731 232464 . + 0 ID=cds-WP_001025326.1;Parent=gene-AD12_RS11730;Dbxref=GenBank:WP_001025326.1;Name=WP_001025326.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AD12_RS11730;product=arginine--tRNA ligase;protein_id=WP_001025326.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 232505 232549 . - . ID=gene-AD12_RS29285;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AD12_RS29285 NZ_JJLK01000064.1 Protein Homology CDS 232505 232549 . - 0 ID=cds-WP_211180499.1;Parent=gene-AD12_RS29285;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AD12_RS29285;product=protein YecV;protein_id=WP_211180499.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 232640 233128 . + . ID=gene-AD12_RS11725;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AD12_RS11725;old_locus_tag=AD12_2287 NZ_JJLK01000064.1 Protein Homology CDS 232640 233128 . + 0 ID=cds-WP_001299676.1;Parent=gene-AD12_RS11725;Dbxref=GenBank:WP_001299676.1;Name=WP_001299676.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=AD12_RS11725;product=lysozyme inhibitor LprI family protein;protein_id=WP_001299676.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 233248 233640 . - . ID=gene-AD12_RS0124035;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AD12_RS0124035 NZ_JJLK01000064.1 Protein Homology CDS 233248 233640 . - 0 ID=cds-WP_001259583.1;Parent=gene-AD12_RS0124035;Dbxref=GenBank:WP_001259583.1;Name=WP_001259583.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AD12_RS0124035;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 233640 235718 . - . ID=gene-AD12_RS11720;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD12_RS11720;old_locus_tag=AD12_2289 NZ_JJLK01000064.1 Protein Homology CDS 233640 235718 . - 0 ID=cds-WP_000066983.1;Parent=gene-AD12_RS11720;Dbxref=GenBank:WP_000066983.1;Name=WP_000066983.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AD12_RS11720;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066983.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 235711 236859 . - . ID=gene-AD12_RS11715;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD12_RS11715;old_locus_tag=AD12_2290 NZ_JJLK01000064.1 Protein Homology CDS 235711 236859 . - 0 ID=cds-WP_001278936.1;Parent=gene-AD12_RS11715;Dbxref=GenBank:WP_001278936.1;Name=WP_001278936.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AD12_RS11715;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278936.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 237061 237705 . - . ID=gene-AD12_RS11710;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AD12_RS11710;old_locus_tag=AD12_2292 NZ_JJLK01000064.1 Protein Homology CDS 237061 237705 . - 0 ID=cds-WP_000983609.1;Parent=gene-AD12_RS11710;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AD12_RS11710;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 237716 238105 . - . ID=gene-AD12_RS11705;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AD12_RS11705;old_locus_tag=AD12_2293 NZ_JJLK01000064.1 Protein Homology CDS 237716 238105 . - 0 ID=cds-WP_000763867.1;Parent=gene-AD12_RS11705;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AD12_RS11705;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 238120 239169 . - . ID=gene-AD12_RS11700;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AD12_RS11700;old_locus_tag=AD12_2294 NZ_JJLK01000064.1 Protein Homology CDS 238120 239169 . - 0 ID=cds-WP_000036371.1;Parent=gene-AD12_RS11700;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AD12_RS11700;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 239172 240032 . - . ID=gene-AD12_RS11695;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AD12_RS11695;old_locus_tag=AD12_2295 NZ_JJLK01000064.1 Protein Homology CDS 239172 240032 . - 0 ID=cds-WP_001421499.1;Parent=gene-AD12_RS11695;Dbxref=GenBank:WP_001421499.1;Name=WP_001421499.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AD12_RS11695;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_001421499.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 240051 241652 . - . ID=gene-AD12_RS11690;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD12_RS11690;old_locus_tag=AD12_2296 NZ_JJLK01000064.1 Protein Homology CDS 240051 241652 . - 0 ID=cds-WP_000483221.1;Parent=gene-AD12_RS11690;Dbxref=GenBank:WP_000483221.1;Name=WP_000483221.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AD12_RS11690;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483221.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 241698 243359 . - . ID=gene-AD12_RS11685;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AD12_RS11685;old_locus_tag=AD12_2297 NZ_JJLK01000064.1 Protein Homology CDS 241698 243359 . - 0 ID=cds-WP_001370571.1;Parent=gene-AD12_RS11685;Dbxref=GenBank:WP_001370571.1;Name=WP_001370571.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AD12_RS11685;product=methyl-accepting chemotaxis protein II;protein_id=WP_001370571.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 243504 244007 . - . ID=gene-AD12_RS11680;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AD12_RS11680;old_locus_tag=AD12_2298 NZ_JJLK01000064.1 Protein Homology CDS 243504 244007 . - 0 ID=cds-WP_000147302.1;Parent=gene-AD12_RS11680;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AD12_RS11680;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 244028 245992 . - . ID=gene-AD12_RS11675;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AD12_RS11675;old_locus_tag=AD12_2299 NZ_JJLK01000064.1 Protein Homology CDS 244028 245992 . - 0 ID=cds-WP_001300654.1;Parent=gene-AD12_RS11675;Dbxref=GenBank:WP_001300654.1;Name=WP_001300654.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283911.1;locus_tag=AD12_RS11675;product=chemotaxis protein CheA;protein_id=WP_001300654.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 245997 246923 . - . ID=gene-AD12_RS11670;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AD12_RS11670;old_locus_tag=AD12_2300 NZ_JJLK01000064.1 Protein Homology CDS 245997 246923 . - 0 ID=cds-WP_000795630.1;Parent=gene-AD12_RS11670;Dbxref=GenBank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AD12_RS11670;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 246920 247807 . - . ID=gene-AD12_RS11665;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD12_RS11665;old_locus_tag=AD12_2301 NZ_JJLK01000064.1 Protein Homology CDS 246920 247807 . - 0 ID=cds-WP_032286495.1;Parent=gene-AD12_RS11665;Dbxref=GenBank:WP_032286495.1;Name=WP_032286495.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AD12_RS11665;product=flagellar motor stator protein MotA;protein_id=WP_032286495.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 247934 248512 . - . ID=gene-AD12_RS11660;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AD12_RS11660;old_locus_tag=AD12_2302 NZ_JJLK01000064.1 Protein Homology CDS 247934 248512 . - 0 ID=cds-WP_032286496.1;Parent=gene-AD12_RS11660;Dbxref=GenBank:WP_032286496.1;Name=WP_032286496.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AD12_RS11660;product=flagellar transcriptional regulator FlhC;protein_id=WP_032286496.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 248515 248865 . - . ID=gene-AD12_RS11655;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AD12_RS11655;old_locus_tag=AD12_2303 NZ_JJLK01000064.1 Protein Homology CDS 248515 248865 . - 0 ID=cds-WP_001295647.1;Parent=gene-AD12_RS11655;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AD12_RS11655;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 249644 250072 . + . ID=gene-AD12_RS11650;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AD12_RS11650;old_locus_tag=AD12_2305 NZ_JJLK01000064.1 Protein Homology CDS 249644 250072 . + 0 ID=cds-WP_000122437.1;Parent=gene-AD12_RS11650;Dbxref=GenBank:WP_000122437.1;Name=WP_000122437.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AD12_RS11650;product=universal stress protein UspC;protein_id=WP_000122437.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 250079 251503 . - . ID=gene-AD12_RS11645;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AD12_RS11645;old_locus_tag=AD12_2306 NZ_JJLK01000064.1 Protein Homology CDS 250079 251503 . - 0 ID=cds-WP_032286497.1;Parent=gene-AD12_RS11645;Dbxref=GenBank:WP_032286497.1;Name=WP_032286497.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AD12_RS11645;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_032286497.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 251478 252278 . - . ID=gene-AD12_RS11640;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AD12_RS11640;old_locus_tag=AD12_2307 NZ_JJLK01000064.1 Protein Homology CDS 251478 252278 . - 0 ID=cds-WP_001299673.1;Parent=gene-AD12_RS11640;Dbxref=GenBank:WP_001299673.1;Name=WP_001299673.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AD12_RS11640;product=trehalose-phosphatase;protein_id=WP_001299673.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 252445 253431 . - . ID=gene-AD12_RS11635;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AD12_RS11635;old_locus_tag=AD12_2308 NZ_JJLK01000064.1 Protein Homology CDS 252445 253431 . - 0 ID=cds-WP_000100205.1;Parent=gene-AD12_RS11635;Dbxref=GenBank:WP_000100205.1;Name=WP_000100205.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AD12_RS11635;product=arabinose ABC transporter permease AraH;protein_id=WP_000100205.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 253446 254960 . - . ID=gene-AD12_RS11630;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AD12_RS11630;old_locus_tag=AD12_2309 NZ_JJLK01000064.1 Protein Homology CDS 253446 254960 . - 0 ID=cds-WP_032286498.1;Parent=gene-AD12_RS11630;Dbxref=GenBank:WP_032286498.1;Name=WP_032286498.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AD12_RS11630;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_032286498.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 255030 256019 . - . ID=gene-AD12_RS11625;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AD12_RS11625;old_locus_tag=AD12_2310 NZ_JJLK01000064.1 Protein Homology CDS 255030 256019 . - 0 ID=cds-WP_000548675.1;Parent=gene-AD12_RS11625;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AD12_RS11625;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 256816 257319 . + . ID=gene-AD12_RS11620;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AD12_RS11620;old_locus_tag=AD12_2311 NZ_JJLK01000064.1 Protein Homology CDS 256816 257319 . + 0 ID=cds-WP_000179469.1;Parent=gene-AD12_RS11620;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AD12_RS11620;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 257398 257649 . - . ID=gene-AD12_RS11615;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AD12_RS11615;old_locus_tag=AD12_2312 NZ_JJLK01000064.1 Protein Homology CDS 257398 257649 . - 0 ID=cds-WP_000082127.1;Parent=gene-AD12_RS11615;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AD12_RS11615;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 257764 257850 . - . ID=gene-AD12_RS28040;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AD12_RS28040 NZ_JJLK01000064.1 Protein Homology CDS 257764 257850 . - 0 ID=cds-WP_010723106.1;Parent=gene-AD12_RS28040;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AD12_RS28040;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 258113 258436 . + . ID=gene-AD12_RS11605;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AD12_RS11605;old_locus_tag=AD12_2314 NZ_JJLK01000064.1 Protein Homology CDS 258113 258436 . + 0 ID=cds-WP_001237875.1;Parent=gene-AD12_RS11605;Dbxref=GenBank:WP_001237875.1;Name=WP_001237875.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AD12_RS11605;product=YecR-like lipofamily protein;protein_id=WP_001237875.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 258608 259105 . + . ID=gene-AD12_RS11600;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AD12_RS11600;old_locus_tag=AD12_2316 NZ_JJLK01000064.1 Protein Homology CDS 258608 259105 . + 0 ID=cds-WP_000917208.1;Parent=gene-AD12_RS11600;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AD12_RS11600;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 259143 259382 . - . ID=gene-AD12_RS11595;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AD12_RS11595;old_locus_tag=AD12_2317 NZ_JJLK01000064.1 Protein Homology CDS 259143 259382 . - 0 ID=cds-WP_000377223.1;Parent=gene-AD12_RS11595;Dbxref=GenBank:WP_000377223.1;Name=WP_000377223.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AD12_RS11595;product=YecH family metal-binding protein;protein_id=WP_000377223.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 259574 260785 . + . ID=gene-AD12_RS11590;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AD12_RS11590;old_locus_tag=AD12_2319 NZ_JJLK01000064.1 Protein Homology CDS 259574 260785 . + 0 ID=cds-WP_000797566.1;Parent=gene-AD12_RS11590;Dbxref=GenBank:WP_000797566.1;Name=WP_000797566.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AD12_RS11590;product=tyrosine transporter TyrP;protein_id=WP_000797566.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 260847 261512 . - . ID=gene-AD12_RS11585;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AD12_RS11585;old_locus_tag=AD12_2320 NZ_JJLK01000064.1 Protein Homology CDS 260847 261512 . - 0 ID=cds-WP_000847880.1;Parent=gene-AD12_RS11585;Dbxref=GenBank:WP_000847880.1;Name=WP_000847880.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310643.1;locus_tag=AD12_RS11585;product=UPF0149 family protein YecA;protein_id=WP_000847880.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 261708 261794 . - . ID=gene-AD12_RS11580;Name=AD12_RS11580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11580;old_locus_tag=AD12_2321 NZ_JJLK01000064.1 tRNAscan-SE tRNA 261708 261794 . - . ID=rna-AD12_RS11580;Parent=gene-AD12_RS11580;anticodon=(pos:complement(261758..261760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11580;product=tRNA-Leu NZ_JJLK01000064.1 tRNAscan-SE exon 261708 261794 . - . ID=exon-AD12_RS11580-1;Parent=rna-AD12_RS11580;anticodon=(pos:complement(261758..261760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11580;product=tRNA-Leu NZ_JJLK01000064.1 RefSeq gene 261807 261880 . - . ID=gene-AD12_RS11575;Name=AD12_RS11575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11575;old_locus_tag=AD12_2322 NZ_JJLK01000064.1 tRNAscan-SE tRNA 261807 261880 . - . ID=rna-AD12_RS11575;Parent=gene-AD12_RS11575;anticodon=(pos:complement(261846..261848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11575;product=tRNA-Cys NZ_JJLK01000064.1 tRNAscan-SE exon 261807 261880 . - . ID=exon-AD12_RS11575-1;Parent=rna-AD12_RS11575;anticodon=(pos:complement(261846..261848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11575;product=tRNA-Cys NZ_JJLK01000064.1 RefSeq gene 261935 262010 . - . ID=gene-AD12_RS11570;Name=AD12_RS11570;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11570;old_locus_tag=AD12_2323 NZ_JJLK01000064.1 tRNAscan-SE tRNA 261935 262010 . - . ID=rna-AD12_RS11570;Parent=gene-AD12_RS11570;anticodon=(pos:complement(261975..261977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11570;product=tRNA-Gly NZ_JJLK01000064.1 tRNAscan-SE exon 261935 262010 . - . ID=exon-AD12_RS11570-1;Parent=rna-AD12_RS11570;anticodon=(pos:complement(261975..261977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11570;product=tRNA-Gly NZ_JJLK01000064.1 RefSeq gene 262162 262710 . - . ID=gene-AD12_RS11565;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AD12_RS11565;old_locus_tag=AD12_2324 NZ_JJLK01000064.1 Protein Homology CDS 262162 262710 . - 0 ID=cds-WP_001160187.1;Parent=gene-AD12_RS11565;Dbxref=GenBank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AD12_RS11565;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 262767 264599 . - . ID=gene-AD12_RS11560;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AD12_RS11560;old_locus_tag=AD12_2325 NZ_JJLK01000064.1 Protein Homology CDS 262767 264599 . - 0 ID=cds-WP_032286499.1;Parent=gene-AD12_RS11560;Dbxref=GenBank:WP_032286499.1;Name=WP_032286499.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AD12_RS11560;product=excinuclease ABC subunit UvrC;protein_id=WP_032286499.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 264596 265252 . - . ID=gene-AD12_RS11555;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AD12_RS11555;old_locus_tag=AD12_2326 NZ_JJLK01000064.1 Protein Homology CDS 264596 265252 . - 0 ID=cds-WP_000611328.1;Parent=gene-AD12_RS11555;Dbxref=GenBank:WP_000611328.1;Name=WP_000611328.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AD12_RS11555;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611328.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 265394 265510 . + . ID=gene-AD12_RS29805;Name=AD12_RS29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29805;old_locus_tag=AD12_2327 NZ_JJLK01000064.1 Protein Homology CDS 265394 265510 . + 0 ID=cds-WP_001302039.1;Parent=gene-AD12_RS29805;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AD12_RS29805;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 265548 265724 . + . ID=gene-AD12_RS28705;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AD12_RS28705 NZ_JJLK01000064.1 Protein Homology CDS 265548 265724 . + 0 ID=cds-WP_000590344.1;Parent=gene-AD12_RS28705;Dbxref=GenBank:WP_000590344.1;Name=WP_000590344.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AD12_RS28705;product=protein YecU;protein_id=WP_000590344.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 265711 265935 . + . ID=gene-AD12_RS11550;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AD12_RS11550;old_locus_tag=AD12_2328 NZ_JJLK01000064.1 Protein Homology CDS 265711 265935 . + 0 ID=cds-WP_000106474.1;Parent=gene-AD12_RS11550;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AD12_RS11550;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 266002 266724 . - . ID=gene-AD12_RS11545;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AD12_RS11545;old_locus_tag=AD12_2329 NZ_JJLK01000064.1 Protein Homology CDS 266002 266724 . - 0 ID=cds-WP_001154265.1;Parent=gene-AD12_RS11545;Dbxref=GenBank:WP_001154265.1;Name=WP_001154265.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AD12_RS11545;product=transcriptional regulator SdiA;protein_id=WP_001154265.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 266954 267706 . - . ID=gene-AD12_RS11540;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AD12_RS11540;old_locus_tag=AD12_2330 NZ_JJLK01000064.1 Protein Homology CDS 266954 267706 . - 0 ID=cds-WP_001272994.1;Parent=gene-AD12_RS11540;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AD12_RS11540;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 267703 268371 . - . ID=gene-AD12_RS11535;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AD12_RS11535;old_locus_tag=AD12_2331 NZ_JJLK01000064.1 Protein Homology CDS 267703 268371 . - 0 ID=cds-WP_032174101.1;Parent=gene-AD12_RS11535;Dbxref=GenBank:WP_032174101.1;Name=WP_032174101.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AD12_RS11535;product=cystine ABC transporter permease;protein_id=WP_032174101.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 268386 269372 . - . ID=gene-AD12_RS11530;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AD12_RS11530;old_locus_tag=AD12_2332 NZ_JJLK01000064.1 Protein Homology CDS 268386 269372 . - 0 ID=cds-WP_001128215.1;Parent=gene-AD12_RS11530;Dbxref=GenBank:WP_001128215.1;Name=WP_001128215.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AD12_RS11530;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 269477 270277 . - . ID=gene-AD12_RS11525;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AD12_RS11525;old_locus_tag=AD12_2333 NZ_JJLK01000064.1 Protein Homology CDS 269477 270277 . - 0 ID=cds-WP_001295643.1;Parent=gene-AD12_RS11525;Dbxref=GenBank:WP_001295643.1;Name=WP_001295643.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AD12_RS11525;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001295643.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 270365 270916 . - . ID=gene-AD12_RS11520;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AD12_RS11520;old_locus_tag=AD12_2334 NZ_JJLK01000064.1 Protein Homology CDS 270365 270916 . - 0 ID=cds-WP_001300606.1;Parent=gene-AD12_RS11520;Dbxref=GenBank:WP_001300606.1;Name=WP_001300606.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AD12_RS11520;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001300606.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 270962 271681 . - . ID=gene-AD12_RS11515;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AD12_RS11515;old_locus_tag=AD12_2335 NZ_JJLK01000064.1 Protein Homology CDS 270962 271681 . - 0 ID=cds-WP_001087463.1;Parent=gene-AD12_RS11515;Dbxref=GenBank:WP_001087463.1;Name=WP_001087463.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AD12_RS11515;product=RNA polymerase sigma factor FliA;protein_id=WP_001087463.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 272001 273713 . - . ID=gene-AD12_RS11510;Name=AD12_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11510;old_locus_tag=AD12_2337 NZ_JJLK01000064.1 Protein Homology CDS 272001 273713 . - 0 ID=cds-WP_001563901.1;Parent=gene-AD12_RS11510;Dbxref=GenBank:WP_001563901.1;Name=WP_001563901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004016342.1;locus_tag=AD12_RS11510;product=FliC/FljB family flagellin;protein_id=WP_001563901.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 273979 275385 . + . ID=gene-AD12_RS11505;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD12_RS11505;old_locus_tag=AD12_2338 NZ_JJLK01000064.1 Protein Homology CDS 273979 275385 . + 0 ID=cds-WP_000146784.1;Parent=gene-AD12_RS11505;Dbxref=GenBank:WP_000146784.1;Name=WP_000146784.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AD12_RS11505;product=flagellar filament capping protein FliD;protein_id=WP_000146784.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 275410 275820 . + . ID=gene-AD12_RS11500;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD12_RS11500;old_locus_tag=AD12_2339 NZ_JJLK01000064.1 Protein Homology CDS 275410 275820 . + 0 ID=cds-WP_000270663.1;Parent=gene-AD12_RS11500;Dbxref=GenBank:WP_000270663.1;Name=WP_000270663.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AD12_RS11500;product=flagellar export chaperone FliS;protein_id=WP_000270663.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 275820 276185 . + . ID=gene-AD12_RS11495;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AD12_RS11495;old_locus_tag=AD12_2340 NZ_JJLK01000064.1 Protein Homology CDS 275820 276185 . + 0 ID=cds-WP_001015033.1;Parent=gene-AD12_RS11495;Dbxref=GenBank:WP_001015033.1;Name=WP_001015033.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AD12_RS11495;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015033.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 276263 277750 . + . ID=gene-AD12_RS11490;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AD12_RS11490;old_locus_tag=AD12_2341 NZ_JJLK01000064.1 Protein Homology CDS 276263 277750 . + 0 ID=cds-WP_001245697.1;Parent=gene-AD12_RS11490;Dbxref=GenBank:WP_001245697.1;Name=WP_001245697.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AD12_RS11490;product=alpha-amylase;protein_id=WP_001245697.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 277784 278197 . - . ID=gene-AD12_RS11485;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AD12_RS11485;old_locus_tag=AD12_2342 NZ_JJLK01000064.1 Protein Homology CDS 277784 278197 . - 0 ID=cds-WP_032286500.1;Parent=gene-AD12_RS11485;Dbxref=GenBank:WP_032286500.1;Name=WP_032286500.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AD12_RS11485;product=lipoprotein YedD;protein_id=WP_032286500.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 278384 279589 . + . ID=gene-AD12_RS11480;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AD12_RS11480;old_locus_tag=AD12_2343 NZ_JJLK01000064.1 Protein Homology CDS 278384 279589 . + 0 ID=cds-WP_000118911.1;Parent=gene-AD12_RS11480;Dbxref=GenBank:WP_000118911.1;Name=WP_000118911.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AD12_RS11480;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118911.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 279586 279819 . + . ID=gene-AD12_RS11475;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AD12_RS11475;old_locus_tag=AD12_2344 NZ_JJLK01000064.1 Protein Homology CDS 279586 279819 . + 0 ID=cds-WP_000790504.1;Parent=gene-AD12_RS11475;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AD12_RS11475;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 279926 280597 . + . ID=gene-AD12_RS11470;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AD12_RS11470;old_locus_tag=AD12_2345 NZ_JJLK01000064.1 Protein Homology CDS 279926 280597 . + 0 ID=cds-WP_032286501.1;Parent=gene-AD12_RS11470;Dbxref=GenBank:WP_032286501.1;Name=WP_032286501.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AD12_RS11470;product=SOS response-associated peptidase;protein_id=WP_032286501.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 280672 281807 . - . ID=gene-AD12_RS11465;Name=AD12_RS11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS11465;old_locus_tag=AD12_2347;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 280672 281807 . - 0 ID=cds-AD12_RS11465;Parent=gene-AD12_RS11465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695252.1;locus_tag=AD12_RS11465;product=DUF5503 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 282002 282133 . + . ID=gene-AD12_RS29900;Name=AD12_RS29900;end_range=282133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29900;partial=true;pseudo=true;start_range=.,282002 NZ_JJLK01000064.1 Protein Homology CDS 282002 282133 . + 0 ID=cds-AD12_RS29900;Parent=gene-AD12_RS29900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=282133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003844207.1;locus_tag=AD12_RS29900;partial=true;product=integrase;pseudo=true;start_range=.,282002;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 282158 282472 . - . ID=gene-AD12_RS11460;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AD12_RS11460;old_locus_tag=AD12_2348 NZ_JJLK01000064.1 Protein Homology CDS 282158 282472 . - 0 ID=cds-WP_001274299.1;Parent=gene-AD12_RS11460;Dbxref=GenBank:WP_001274299.1;Name=WP_001274299.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AD12_RS11460;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274299.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 282687 284345 . + . ID=gene-AD12_RS11455;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AD12_RS11455;old_locus_tag=AD12_2349 NZ_JJLK01000064.1 Protein Homology CDS 282687 284345 . + 0 ID=cds-WP_001563907.1;Parent=gene-AD12_RS11455;Dbxref=GenBank:WP_001563907.1;Name=WP_001563907.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416448.1;locus_tag=AD12_RS11455;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001563907.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 284338 285333 . + . ID=gene-AD12_RS11450;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AD12_RS11450;old_locus_tag=AD12_2350 NZ_JJLK01000064.1 Protein Homology CDS 284338 285333 . + 0 ID=cds-WP_000067950.1;Parent=gene-AD12_RS11450;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AD12_RS11450;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 285326 286012 . + . ID=gene-AD12_RS11445;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AD12_RS11445;old_locus_tag=AD12_2351 NZ_JJLK01000064.1 Protein Homology CDS 285326 286012 . + 0 ID=cds-WP_001282706.1;Parent=gene-AD12_RS11445;Dbxref=GenBank:WP_001282706.1;Name=WP_001282706.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AD12_RS11445;product=flagellar assembly protein FliH;protein_id=WP_001282706.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 286012 287385 . + . ID=gene-AD12_RS11440;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD12_RS11440;old_locus_tag=AD12_2352 NZ_JJLK01000064.1 Protein Homology CDS 286012 287385 . + 0 ID=cds-WP_000213294.1;Parent=gene-AD12_RS11440;Dbxref=GenBank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AD12_RS11440;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 287404 287847 . + . ID=gene-AD12_RS11435;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD12_RS11435;old_locus_tag=AD12_2353 NZ_JJLK01000064.1 Protein Homology CDS 287404 287847 . + 0 ID=cds-WP_000807584.1;Parent=gene-AD12_RS11435;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AD12_RS11435;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 287844 288971 . + . ID=gene-AD12_RS11430;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AD12_RS11430;old_locus_tag=AD12_2354 NZ_JJLK01000064.1 Protein Homology CDS 287844 288971 . + 0 ID=cds-WP_000620109.1;Parent=gene-AD12_RS11430;Dbxref=GenBank:WP_000620109.1;Name=WP_000620109.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AD12_RS11430;product=flagellar hook-length control protein FliK;protein_id=WP_000620109.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 289076 289540 . + . ID=gene-AD12_RS11425;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AD12_RS11425;old_locus_tag=AD12_2355 NZ_JJLK01000064.1 Protein Homology CDS 289076 289540 . + 0 ID=cds-WP_000133106.1;Parent=gene-AD12_RS11425;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AD12_RS11425;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 289545 290549 . + . ID=gene-AD12_RS11420;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AD12_RS11420;old_locus_tag=AD12_2356 NZ_JJLK01000064.1 Protein Homology CDS 289545 290549 . + 0 ID=cds-WP_001295641.1;Parent=gene-AD12_RS11420;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AD12_RS11420;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 290546 290959 . + . ID=gene-AD12_RS11415;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AD12_RS11415;old_locus_tag=AD12_2357 NZ_JJLK01000064.1 Protein Homology CDS 290546 290959 . + 0 ID=cds-WP_001282098.1;Parent=gene-AD12_RS11415;Dbxref=GenBank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AD12_RS11415;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 290962 291327 . + . ID=gene-AD12_RS11410;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AD12_RS11410;old_locus_tag=AD12_2358 NZ_JJLK01000064.1 Protein Homology CDS 290962 291327 . + 0 ID=cds-WP_001295640.1;Parent=gene-AD12_RS11410;Dbxref=GenBank:WP_001295640.1;Name=WP_001295640.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AD12_RS11410;product=flagellar biosynthetic protein FliO;protein_id=WP_001295640.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 291327 292064 . + . ID=gene-AD12_RS11405;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD12_RS11405;old_locus_tag=AD12_2359 NZ_JJLK01000064.1 Protein Homology CDS 291327 292064 . + 0 ID=cds-WP_001253450.1;Parent=gene-AD12_RS11405;Dbxref=GenBank:WP_001253450.1;Name=WP_001253450.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AD12_RS11405;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253450.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 292074 292343 . + . ID=gene-AD12_RS11400;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AD12_RS11400;old_locus_tag=AD12_2360 NZ_JJLK01000064.1 Protein Homology CDS 292074 292343 . + 0 ID=cds-WP_000187358.1;Parent=gene-AD12_RS11400;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AD12_RS11400;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 292352 293137 . + . ID=gene-AD12_RS11395;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD12_RS11395;old_locus_tag=AD12_2361 NZ_JJLK01000064.1 Protein Homology CDS 292352 293137 . + 0 ID=cds-WP_000983976.1;Parent=gene-AD12_RS11395;Dbxref=GenBank:WP_000983976.1;Name=WP_000983976.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AD12_RS11395;product=flagellar biosynthetic protein FliR;protein_id=WP_000983976.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 293427 294050 . + . ID=gene-AD12_RS11390;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AD12_RS11390;old_locus_tag=AD12_2362 NZ_JJLK01000064.1 Protein Homology CDS 293427 294050 . + 0 ID=cds-WP_000103994.1;Parent=gene-AD12_RS11390;Dbxref=GenBank:WP_000103994.1;Name=WP_000103994.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AD12_RS11390;product=transcriptional regulator RcsA;protein_id=WP_000103994.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 294094 294282 . - . ID=gene-AD12_RS11385;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AD12_RS11385;old_locus_tag=AD12_2363 NZ_JJLK01000064.1 Protein Homology CDS 294094 294282 . - 0 ID=cds-WP_000867217.1;Parent=gene-AD12_RS11385;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AD12_RS11385;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 294445 294672 . + . ID=gene-AD12_RS11380;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AD12_RS11380;old_locus_tag=AD12_2364 NZ_JJLK01000064.1 Protein Homology CDS 294445 294672 . + 0 ID=cds-WP_032286502.1;Parent=gene-AD12_RS11380;Dbxref=GenBank:WP_032286502.1;Name=WP_032286502.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AD12_RS11380;product=peroxide/acid resistance protein YodD;protein_id=WP_032286502.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 294969 295784 . + . ID=gene-AD12_RS11375;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AD12_RS11375;old_locus_tag=AD12_2365 NZ_JJLK01000064.1 Protein Homology CDS 294969 295784 . + 0 ID=cds-WP_001563908.1;Parent=gene-AD12_RS11375;Dbxref=GenBank:WP_001563908.1;Name=WP_001563908.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AD12_RS11375;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_001563908.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 295781 297475 . - . ID=gene-AD12_RS11370;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AD12_RS11370;old_locus_tag=AD12_2366 NZ_JJLK01000064.1 Protein Homology CDS 295781 297475 . - 0 ID=cds-WP_077745029.1;Parent=gene-AD12_RS11370;Dbxref=GenBank:WP_077745029.1;Name=WP_077745029.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310721.1;locus_tag=AD12_RS11370;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_077745029.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 297713 297895 . - . ID=gene-AD12_RS11365;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AD12_RS11365;old_locus_tag=AD12_2367 NZ_JJLK01000064.1 Protein Homology CDS 297713 297895 . - 0 ID=cds-WP_000009306.1;Parent=gene-AD12_RS11365;Dbxref=GenBank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AD12_RS11365;product=YodC family protein;protein_id=WP_000009306.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 297974 298891 . - . ID=gene-AD12_RS11360;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AD12_RS11360;old_locus_tag=AD12_2368 NZ_JJLK01000064.1 Protein Homology CDS 297974 298891 . - 0 ID=cds-WP_000922683.1;Parent=gene-AD12_RS11360;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AD12_RS11360;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 299064 299984 . + . ID=gene-AD12_RS11355;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AD12_RS11355;old_locus_tag=AD12_2369 NZ_JJLK01000064.1 Protein Homology CDS 299064 299984 . + 0 ID=cds-WP_001212226.1;Parent=gene-AD12_RS11355;Dbxref=GenBank:WP_001212226.1;Name=WP_001212226.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AD12_RS11355;product=drug/metabolite exporter YedA;protein_id=WP_001212226.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 299973 300443 . - . ID=gene-AD12_RS11350;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AD12_RS11350;old_locus_tag=AD12_2370 NZ_JJLK01000064.1 Protein Homology CDS 299973 300443 . - 0 ID=cds-WP_000786004.1;Parent=gene-AD12_RS11350;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AD12_RS11350;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 300424 301842 . - . ID=gene-AD12_RS11345;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AD12_RS11345;old_locus_tag=AD12_2371 NZ_JJLK01000064.1 Protein Homology CDS 300424 301842 . - 0 ID=cds-WP_001543850.1;Parent=gene-AD12_RS11345;Dbxref=GenBank:WP_001543850.1;Name=WP_001543850.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AD12_RS11345;product=DNA-cytosine methyltransferase;protein_id=WP_001543850.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 301909 302604 . - . ID=gene-AD12_RS11340;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AD12_RS11340;old_locus_tag=AD12_2372 NZ_JJLK01000064.1 Protein Homology CDS 301909 302604 . - 0 ID=cds-WP_001543851.1;Parent=gene-AD12_RS11340;Dbxref=GenBank:WP_001543851.1;Name=WP_001543851.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AD12_RS11340;product=phosphohydrolase;protein_id=WP_001543851.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 302644 302925 . - . ID=gene-AD12_RS11335;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AD12_RS11335;old_locus_tag=AD12_2373 NZ_JJLK01000064.1 Protein Homology CDS 302644 302925 . - 0 ID=cds-WP_001297704.1;Parent=gene-AD12_RS11335;Dbxref=GenBank:WP_001297704.1;Name=WP_001297704.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AD12_RS11335;product=cell division protein DrpB;protein_id=WP_001297704.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 303576 304649 . + . ID=gene-AD12_RS11330;Name=AD12_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11330;old_locus_tag=AD12_2374 NZ_JJLK01000064.1 Protein Homology CDS 303576 304649 . + 0 ID=cds-WP_000824364.1;Parent=gene-AD12_RS11330;Dbxref=GenBank:WP_000824364.1;Name=WP_000824364.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824385.1;locus_tag=AD12_RS11330;product=porin;protein_id=WP_000824364.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 304789 304983 . - . ID=gene-AD12_RS28710;Name=AD12_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28710 NZ_JJLK01000064.1 Protein Homology CDS 304789 304983 . - 0 ID=cds-WP_001402296.1;Parent=gene-AD12_RS28710;Dbxref=GenBank:WP_001402296.1;Name=WP_001402296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353128.1;locus_tag=AD12_RS28710;product=hypothetical protein;protein_id=WP_001402296.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 305242 306093 . + . ID=gene-AD12_RS11325;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AD12_RS11325;old_locus_tag=AD12_2375 NZ_JJLK01000064.1 Protein Homology CDS 305242 306093 . + 0 ID=cds-WP_000218214.1;Parent=gene-AD12_RS11325;Dbxref=GenBank:WP_000218214.1;Name=WP_000218214.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AD12_RS11325;product=glyoxalase III HchA;protein_id=WP_000218214.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 306201 307559 . - . ID=gene-AD12_RS11320;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AD12_RS11320;old_locus_tag=AD12_2376 NZ_JJLK01000064.1 Protein Homology CDS 306201 307559 . - 0 ID=cds-WP_000826766.1;Parent=gene-AD12_RS11320;Dbxref=GenBank:WP_000826766.1;Name=WP_000826766.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AD12_RS11320;product=two-component system sensor histidine kinase HprS;protein_id=WP_000826766.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 307559 308230 . - . ID=gene-AD12_RS11315;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AD12_RS11315;old_locus_tag=AD12_2377 NZ_JJLK01000064.1 Protein Homology CDS 307559 308230 . - 0 ID=cds-WP_001339045.1;Parent=gene-AD12_RS11315;Dbxref=GenBank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AD12_RS11315;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 308363 308776 . + . ID=gene-AD12_RS11310;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AD12_RS11310;old_locus_tag=AD12_2378 NZ_JJLK01000064.1 Protein Homology CDS 308363 308776 . + 0 ID=cds-WP_032286504.1;Parent=gene-AD12_RS11310;Dbxref=GenBank:WP_032286504.1;Name=WP_032286504.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707855.1;locus_tag=AD12_RS11310;product=hydroxyisourate hydrolase;protein_id=WP_032286504.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 308885 309889 . + . ID=gene-AD12_RS11305;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AD12_RS11305;old_locus_tag=AD12_2379 NZ_JJLK01000064.1 Protein Homology CDS 308885 309889 . + 0 ID=cds-WP_000740094.1;Parent=gene-AD12_RS11305;Dbxref=GenBank:WP_000740094.1;Name=WP_000740094.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AD12_RS11305;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740094.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 309890 310525 . + . ID=gene-AD12_RS11300;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AD12_RS11300;old_locus_tag=AD12_2380 NZ_JJLK01000064.1 Protein Homology CDS 309890 310525 . + 0 ID=cds-WP_001240105.1;Parent=gene-AD12_RS11300;Dbxref=GenBank:WP_001240105.1;Name=WP_001240105.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AD12_RS11300;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240105.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 310782 311432 . + . ID=gene-AD12_RS11295;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AD12_RS11295;old_locus_tag=AD12_2381 NZ_JJLK01000064.1 Protein Homology CDS 310782 311432 . + 0 ID=cds-WP_001007759.1;Parent=gene-AD12_RS11295;Dbxref=GenBank:WP_001007759.1;Name=WP_001007759.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AD12_RS11295;product=metal-binding protein ZinT;protein_id=WP_001007759.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 311776 312306 . + . ID=gene-AD12_RS0124065;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AD12_RS0124065;old_locus_tag=AD12_2382 NZ_JJLK01000064.1 Protein Homology CDS 311776 312306 . + 0 ID=cds-WP_001079074.1;Parent=gene-AD12_RS0124065;Dbxref=GenBank:WP_001079074.1;Name=WP_001079074.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AD12_RS0124065;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 312876 312965 . - . ID=gene-AD12_RS11290;Name=AD12_RS11290;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11290;old_locus_tag=AD12_2383 NZ_JJLK01000064.1 tRNAscan-SE tRNA 312876 312965 . - . ID=rna-AD12_RS11290;Parent=gene-AD12_RS11290;anticodon=(pos:complement(312929..312931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11290;product=tRNA-Ser NZ_JJLK01000064.1 tRNAscan-SE exon 312876 312965 . - . ID=exon-AD12_RS11290-1;Parent=rna-AD12_RS11290;anticodon=(pos:complement(312929..312931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11290;product=tRNA-Ser NZ_JJLK01000064.1 RefSeq gene 313059 313856 . + . ID=gene-AD12_RS11285;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AD12_RS11285;old_locus_tag=AD12_2384 NZ_JJLK01000064.1 Protein Homology CDS 313059 313856 . + 0 ID=cds-WP_001320474.1;Parent=gene-AD12_RS11285;Dbxref=GenBank:WP_001320474.1;Name=WP_001320474.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AD12_RS11285;product=DgsA anti-repressor MtfA;protein_id=WP_001320474.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 313957 314032 . + . ID=gene-AD12_RS11280;Name=AD12_RS11280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11280;old_locus_tag=AD12_2385 NZ_JJLK01000064.1 tRNAscan-SE tRNA 313957 314032 . + . ID=rna-AD12_RS11280;Parent=gene-AD12_RS11280;anticodon=(pos:313990..313992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11280;product=tRNA-Asn NZ_JJLK01000064.1 tRNAscan-SE exon 313957 314032 . + . ID=exon-AD12_RS11280-1;Parent=rna-AD12_RS11280;anticodon=(pos:313990..313992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11280;product=tRNA-Asn NZ_JJLK01000064.1 RefSeq gene 314194 315456 . + . ID=gene-AD12_RS11275;Name=AD12_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11275;old_locus_tag=AD12_2386 NZ_JJLK01000064.1 Protein Homology CDS 314194 315456 . + 0 ID=cds-WP_001593427.1;Parent=gene-AD12_RS11275;Dbxref=GenBank:WP_001593427.1;Name=WP_001593427.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AD12_RS11275;product=tyrosine-type recombinase/integrase;protein_id=WP_001593427.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 315650 316954 . - . ID=gene-AD12_RS11270;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AD12_RS11270;old_locus_tag=AD12_2387 NZ_JJLK01000064.1 Protein Homology CDS 315650 316954 . - 0 ID=cds-WP_000703034.1;Parent=gene-AD12_RS11270;Dbxref=GenBank:WP_000703034.1;Name=WP_000703034.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AD12_RS11270;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703034.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 316982 318262 . - . ID=gene-AD12_RS11265;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AD12_RS11265;old_locus_tag=AD12_2388 NZ_JJLK01000064.1 Protein Homology CDS 316982 318262 . - 0 ID=cds-WP_001593428.1;Parent=gene-AD12_RS11265;Dbxref=GenBank:WP_001593428.1;Name=WP_001593428.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AD12_RS11265;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001593428.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 318255 320057 . - . ID=gene-AD12_RS11260;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AD12_RS11260;old_locus_tag=AD12_2389 NZ_JJLK01000064.1 Protein Homology CDS 318255 320057 . - 0 ID=cds-WP_001593429.1;Parent=gene-AD12_RS11260;Dbxref=GenBank:WP_001593429.1;Name=WP_001593429.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AD12_RS11260;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_001593429.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 320044 321756 . - . ID=gene-AD12_RS11255;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AD12_RS11255;old_locus_tag=AD12_2390 NZ_JJLK01000064.1 Protein Homology CDS 320044 321756 . - 0 ID=cds-WP_001327262.1;Parent=gene-AD12_RS11255;Dbxref=GenBank:WP_001327262.1;Name=WP_001327262.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AD12_RS11255;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_001327262.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 322013 322972 . + . ID=gene-AD12_RS11250;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AD12_RS11250;old_locus_tag=AD12_2391 NZ_JJLK01000064.1 Protein Homology CDS 322013 322972 . + 0 ID=cds-WP_000140406.1;Parent=gene-AD12_RS11250;Dbxref=GenBank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AD12_RS11250;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140406.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 323163 329270 . + . ID=gene-AD12_RS11245;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AD12_RS11245;old_locus_tag=AD12_2392 NZ_JJLK01000064.1 Protein Homology CDS 323163 329270 . + 0 ID=cds-WP_001593431.1;Parent=gene-AD12_RS11245;Dbxref=GenBank:WP_001593431.1;Name=WP_001593431.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AD12_RS11245;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_001593431.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 329358 338849 . + . ID=gene-AD12_RS11240;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AD12_RS11240;old_locus_tag=AD12_2393 NZ_JJLK01000064.1 Protein Homology CDS 329358 338849 . + 0 ID=cds-WP_001593432.1;Parent=gene-AD12_RS11240;Dbxref=GenBank:WP_001593432.1;Name=WP_001593432.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AD12_RS11240;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_001593432.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 338846 339946 . + . ID=gene-AD12_RS11235;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AD12_RS11235;old_locus_tag=AD12_2394 NZ_JJLK01000064.1 Protein Homology CDS 338846 339946 . + 0 ID=cds-WP_000982853.1;Parent=gene-AD12_RS11235;Dbxref=GenBank:WP_000982853.1;Name=WP_000982853.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AD12_RS11235;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982853.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 339943 340746 . + . ID=gene-AD12_RS11230;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AD12_RS11230;old_locus_tag=AD12_2395 NZ_JJLK01000064.1 Protein Homology CDS 339943 340746 . + 0 ID=cds-WP_000194282.1;Parent=gene-AD12_RS11230;Dbxref=GenBank:WP_000194282.1;Name=WP_000194282.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AD12_RS11230;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194282.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 340750 342327 . + . ID=gene-AD12_RS11225;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AD12_RS11225;old_locus_tag=AD12_2396 NZ_JJLK01000064.1 Protein Homology CDS 340750 342327 . + 0 ID=cds-WP_001088835.1;Parent=gene-AD12_RS11225;Dbxref=GenBank:WP_001088835.1;Name=WP_001088835.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AD12_RS11225;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088835.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 342458 344479 . + . ID=gene-AD12_RS11220;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AD12_RS11220;old_locus_tag=AD12_2397 NZ_JJLK01000064.1 Protein Homology CDS 342458 344479 . + 0 ID=cds-WP_000784549.1;Parent=gene-AD12_RS11220;Dbxref=GenBank:WP_000784549.1;Name=WP_000784549.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AD12_RS11220;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_000784549.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 345352 346278 . + . ID=gene-AD12_RS29050;Name=AD12_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29050;old_locus_tag=AD12_2398 NZ_JJLK01000064.1 Protein Homology CDS 345352 346278 . + 0 ID=cds-WP_000039782.1;Parent=gene-AD12_RS29050;Dbxref=GenBank:WP_000039782.1;Name=WP_000039782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=AD12_RS29050;product=hypothetical protein;protein_id=WP_000039782.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 346417 346602 . + . ID=gene-AD12_RS0124075;Name=AD12_RS0124075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124075 NZ_JJLK01000064.1 Protein Homology CDS 346417 346602 . + 0 ID=cds-WP_000205185.1;Parent=gene-AD12_RS0124075;Dbxref=GenBank:WP_000205185.1;Name=WP_000205185.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200568.1;locus_tag=AD12_RS0124075;product=AlpA family transcriptional regulator;protein_id=WP_000205185.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 346624 346806 . + . ID=gene-AD12_RS0124080;Name=AD12_RS0124080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124080 NZ_JJLK01000064.1 Protein Homology CDS 346624 346806 . + 0 ID=cds-WP_001513329.1;Parent=gene-AD12_RS0124080;Dbxref=GenBank:WP_001513329.1;Name=WP_001513329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309570.1;locus_tag=AD12_RS0124080;product=hypothetical protein;protein_id=WP_001513329.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 346791 347372 . + . ID=gene-AD12_RS11210;Name=AD12_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11210;old_locus_tag=AD12_2399 NZ_JJLK01000064.1 Protein Homology CDS 346791 347372 . + 0 ID=cds-WP_001593435.1;Parent=gene-AD12_RS11210;Dbxref=GenBank:WP_001593435.1;Name=WP_001593435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227773.1;locus_tag=AD12_RS11210;product=DUF2857 domain-containing protein;protein_id=WP_001593435.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 347362 347571 . + . ID=gene-AD12_RS11205;Name=AD12_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11205;old_locus_tag=AD12_2400 NZ_JJLK01000064.1 Protein Homology CDS 347362 347571 . + 0 ID=cds-WP_001112403.1;Parent=gene-AD12_RS11205;Dbxref=GenBank:WP_001112403.1;Name=WP_001112403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112402.1;locus_tag=AD12_RS11205;product=TraR/DksA family transcriptional regulator;protein_id=WP_001112403.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 347793 347942 . + . ID=gene-AD12_RS28055;Name=AD12_RS28055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28055;old_locus_tag=AD12_2401;partial=true;pseudo=true;start_range=.,347793 NZ_JJLK01000064.1 Protein Homology CDS 347793 347942 . + 0 ID=cds-AD12_RS28055;Parent=gene-AD12_RS28055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245074.1;locus_tag=AD12_RS28055;partial=true;product=Hha/YmoA family nucleoid-associated regulatory protein;pseudo=true;start_range=.,347793;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 348511 348744 . + . ID=gene-AD12_RS11195;Name=AD12_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11195;old_locus_tag=AD12_2403 NZ_JJLK01000064.1 Protein Homology CDS 348511 348744 . + 0 ID=cds-WP_001231171.1;Parent=gene-AD12_RS11195;Dbxref=GenBank:WP_001231171.1;Name=WP_001231171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227775.1;locus_tag=AD12_RS11195;product=hypothetical protein;protein_id=WP_001231171.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 348817 349527 . + . ID=gene-AD12_RS11190;Name=AD12_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11190;old_locus_tag=AD12_2404 NZ_JJLK01000064.1 Protein Homology CDS 348817 349527 . + 0 ID=cds-WP_001593436.1;Parent=gene-AD12_RS11190;Dbxref=GenBank:WP_001593436.1;Name=WP_001593436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227776.1;locus_tag=AD12_RS11190;product=lytic transglycosylase domain-containing protein;protein_id=WP_001593436.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 349527 349820 . + . ID=gene-AD12_RS11185;Name=AD12_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11185;old_locus_tag=AD12_2405 NZ_JJLK01000064.1 Protein Homology CDS 349527 349820 . + 0 ID=cds-WP_000600171.1;Parent=gene-AD12_RS11185;Dbxref=GenBank:WP_000600171.1;Name=WP_000600171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885319.1;locus_tag=AD12_RS11185;product=TrbC/VirB2 family protein;protein_id=WP_000600171.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 349833 352571 . + . ID=gene-AD12_RS11180;Name=AD12_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11180;old_locus_tag=AD12_2406 NZ_JJLK01000064.1 Protein Homology CDS 349833 352571 . + 0 ID=cds-WP_001096398.1;Parent=gene-AD12_RS11180;Dbxref=GenBank:WP_001096398.1;Name=WP_001096398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227778.1;locus_tag=AD12_RS11180;product=VirB3 family type IV secretion system protein;protein_id=WP_001096398.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 352589 353296 . + . ID=gene-AD12_RS11175;Name=AD12_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11175;old_locus_tag=AD12_2407 NZ_JJLK01000064.1 Protein Homology CDS 352589 353296 . + 0 ID=cds-WP_000857358.1;Parent=gene-AD12_RS11175;Dbxref=GenBank:WP_000857358.1;Name=WP_000857358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227779.1;locus_tag=AD12_RS11175;product=type IV secretion system protein;protein_id=WP_000857358.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 353304 353546 . + . ID=gene-AD12_RS0124085;Name=AD12_RS0124085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124085 NZ_JJLK01000064.1 Protein Homology CDS 353304 353546 . + 0 ID=cds-WP_001593437.1;Parent=gene-AD12_RS0124085;Dbxref=GenBank:WP_001593437.1;Name=WP_001593437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949384.1;locus_tag=AD12_RS0124085;product=EexN family lipoprotein;protein_id=WP_001593437.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 353550 354623 . + . ID=gene-AD12_RS11170;Name=AD12_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11170;old_locus_tag=AD12_2408 NZ_JJLK01000064.1 Protein Homology CDS 353550 354623 . + 0 ID=cds-WP_001593439.1;Parent=gene-AD12_RS11170;Dbxref=GenBank:WP_001593439.1;Name=WP_001593439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227780.1;locus_tag=AD12_RS11170;product=type IV secretion system protein;protein_id=WP_001593439.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 354715 354852 . + . ID=gene-AD12_RS29055;Name=AD12_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29055 NZ_JJLK01000064.1 Protein Homology CDS 354715 354852 . + 0 ID=cds-WP_000825479.1;Parent=gene-AD12_RS29055;Dbxref=GenBank:WP_000825479.1;Name=WP_000825479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157224.1;locus_tag=AD12_RS29055;product=hypothetical protein;protein_id=WP_000825479.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 354845 355528 . + . ID=gene-AD12_RS11165;Name=AD12_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11165;old_locus_tag=AD12_2410 NZ_JJLK01000064.1 Protein Homology CDS 354845 355528 . + 0 ID=cds-WP_000003229.1;Parent=gene-AD12_RS11165;Dbxref=GenBank:WP_000003229.1;Name=WP_000003229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227782.1;locus_tag=AD12_RS11165;product=type IV secretion system protein;protein_id=WP_000003229.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 355525 356433 . + . ID=gene-AD12_RS11160;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=AD12_RS11160;old_locus_tag=AD12_2411 NZ_JJLK01000064.1 Protein Homology CDS 355525 356433 . + 0 ID=cds-WP_000976328.1;Parent=gene-AD12_RS11160;Dbxref=GenBank:WP_000976328.1;Name=WP_000976328.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227783.1;locus_tag=AD12_RS11160;product=P-type conjugative transfer protein VirB9;protein_id=WP_000976328.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 356477 357727 . + . ID=gene-AD12_RS11155;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=AD12_RS11155;old_locus_tag=AD12_2412 NZ_JJLK01000064.1 Protein Homology CDS 356477 357727 . + 0 ID=cds-WP_032286506.1;Parent=gene-AD12_RS11155;Dbxref=GenBank:WP_032286506.1;Name=WP_032286506.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227784.1;locus_tag=AD12_RS11155;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=WP_032286506.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 357717 358742 . + . ID=gene-AD12_RS11150;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=AD12_RS11150;old_locus_tag=AD12_2413 NZ_JJLK01000064.1 Protein Homology CDS 357717 358742 . + 0 ID=cds-WP_000125558.1;Parent=gene-AD12_RS11150;Dbxref=GenBank:WP_000125558.1;Name=WP_000125558.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227785.1;locus_tag=AD12_RS11150;product=P-type DNA transfer ATPase VirB11;protein_id=WP_000125558.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 358739 359137 . + . ID=gene-AD12_RS11145;Name=AD12_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11145;old_locus_tag=AD12_2414 NZ_JJLK01000064.1 Protein Homology CDS 358739 359137 . + 0 ID=cds-WP_000592251.1;Parent=gene-AD12_RS11145;Dbxref=GenBank:WP_000592251.1;Name=WP_000592251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592251.1;locus_tag=AD12_RS11145;product=cag pathogenicity island Cag12 family protein;protein_id=WP_000592251.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 359173 359478 . + . ID=gene-AD12_RS11140;Name=AD12_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11140;old_locus_tag=AD12_2415 NZ_JJLK01000064.1 Protein Homology CDS 359173 359478 . + 0 ID=cds-WP_000754360.1;Parent=gene-AD12_RS11140;Dbxref=GenBank:WP_000754360.1;Name=WP_000754360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754361.1;locus_tag=AD12_RS11140;product=hypothetical protein;protein_id=WP_000754360.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 359512 359817 . + . ID=gene-AD12_RS0124095;Name=AD12_RS0124095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124095 NZ_JJLK01000064.1 Protein Homology CDS 359512 359817 . + 0 ID=cds-WP_001593443.1;Parent=gene-AD12_RS0124095;Dbxref=GenBank:WP_001593443.1;Name=WP_001593443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172016.1;locus_tag=AD12_RS0124095;product=hypothetical protein;protein_id=WP_001593443.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 360527 362386 . + . ID=gene-AD12_RS11135;Name=AD12_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11135;old_locus_tag=AD12_2417 NZ_JJLK01000064.1 Protein Homology CDS 360527 362386 . + 0 ID=cds-WP_001593444.1;Parent=gene-AD12_RS11135;Dbxref=GenBank:WP_001593444.1;Name=WP_001593444.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227787.1;locus_tag=AD12_RS11135;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_001593444.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 362396 363142 . + . ID=gene-AD12_RS11130;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=AD12_RS11130;old_locus_tag=AD12_2418 NZ_JJLK01000064.1 Protein Homology CDS 362396 363142 . + 0 ID=cds-WP_001593446.1;Parent=gene-AD12_RS11130;Dbxref=GenBank:WP_001593446.1;Name=WP_001593446.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593446.1;locus_tag=AD12_RS11130;product=MobC family replication-relaxation protein;protein_id=WP_001593446.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 363203 366727 . - . ID=gene-AD12_RS11125;Name=AD12_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11125;old_locus_tag=AD12_2419 NZ_JJLK01000064.1 Protein Homology CDS 363203 366727 . - 0 ID=cds-WP_016240611.1;Parent=gene-AD12_RS11125;Dbxref=GenBank:WP_016240611.1;Name=WP_016240611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240611.1;locus_tag=AD12_RS11125;product=DEAD/DEAH box helicase;protein_id=WP_016240611.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 366711 367490 . - . ID=gene-AD12_RS11120;Name=AD12_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11120;old_locus_tag=AD12_2420 NZ_JJLK01000064.1 Protein Homology CDS 366711 367490 . - 0 ID=cds-WP_001593448.1;Parent=gene-AD12_RS11120;Dbxref=GenBank:WP_001593448.1;Name=WP_001593448.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593448.1;locus_tag=AD12_RS11120;product=Hachiman antiphage defense system protein HamA;protein_id=WP_001593448.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 367794 368741 . - . ID=gene-AD12_RS0124105;Name=AD12_RS0124105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124105;old_locus_tag=AD12_2421 NZ_JJLK01000064.1 Protein Homology CDS 367794 368741 . - 0 ID=cds-WP_001593449.1;Parent=gene-AD12_RS0124105;Dbxref=GenBank:WP_001593449.1;Name=WP_001593449.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227789.1;locus_tag=AD12_RS0124105;product=ArdC family protein;protein_id=WP_001593449.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 369582 369941 . + . ID=gene-AD12_RS0124110;Name=AD12_RS0124110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124110 NZ_JJLK01000064.1 Protein Homology CDS 369582 369941 . + 0 ID=cds-WP_001593450.1;Parent=gene-AD12_RS0124110;Dbxref=GenBank:WP_001593450.1;Name=WP_001593450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960911.1;locus_tag=AD12_RS0124110;product=mCpol domain-containing protein;protein_id=WP_001593450.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 369951 370553 . + . ID=gene-AD12_RS29905;Name=AD12_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29905 NZ_JJLK01000064.1 Protein Homology CDS 369951 370553 . + 0 ID=cds-WP_071549951.1;Parent=gene-AD12_RS29905;Dbxref=GenBank:WP_071549951.1;Name=WP_071549951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037740.6;locus_tag=AD12_RS29905;product=hypothetical protein;protein_id=WP_071549951.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 370899 371306 . - . ID=gene-AD12_RS0124120;Name=cap3;gbkey=Gene;gene=cap3;gene_biotype=protein_coding;locus_tag=AD12_RS0124120 NZ_JJLK01000064.1 Protein Homology CDS 370899 371306 . - 0 ID=cds-WP_223340727.1;Parent=gene-AD12_RS0124120;Dbxref=GenBank:WP_223340727.1;Name=WP_223340727.1;Ontology_term=GO:0051607,GO:0008237,GO:0046872;gbkey=CDS;gene=cap3;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004427.1;locus_tag=AD12_RS0124120;product=CBASS system CD-NTase/cGAS isopeptidase Cap3;protein_id=WP_223340727.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 371347 373116 . - . ID=gene-AD12_RS11115;Name=AD12_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11115;old_locus_tag=AD12_2422 NZ_JJLK01000064.1 Protein Homology CDS 371347 373116 . - 0 ID=cds-WP_001593453.1;Parent=gene-AD12_RS11115;Dbxref=GenBank:WP_001593453.1;Name=WP_001593453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240613.1;locus_tag=AD12_RS11115;product=E2/UBC family protein;protein_id=WP_001593453.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 373116 374414 . - . ID=gene-AD12_RS11110;Name=dncV;gbkey=Gene;gene=dncV;gene_biotype=protein_coding;locus_tag=AD12_RS11110;old_locus_tag=AD12_2423 NZ_JJLK01000064.1 Protein Homology CDS 373116 374414 . - 0 ID=cds-WP_001593454.1;Parent=gene-AD12_RS11110;Dbxref=GenBank:WP_001593454.1;Name=WP_001593454.1;gbkey=CDS;gene=dncV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593454.1;locus_tag=AD12_RS11110;product=CBASS phage resistance system c-GMP-AMP synthase DncV;protein_id=WP_001593454.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 374414 375487 . - . ID=gene-AD12_RS11105;Name=AD12_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11105;old_locus_tag=AD12_2424 NZ_JJLK01000064.1 Protein Homology CDS 374414 375487 . - 0 ID=cds-WP_032142592.1;Parent=gene-AD12_RS11105;Dbxref=GenBank:WP_032142592.1;Name=WP_032142592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593456.1;locus_tag=AD12_RS11105;product=CBASS cGAMP-activated phospholipase;protein_id=WP_032142592.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 375909 377654 . - . ID=gene-AD12_RS11100;Name=AD12_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11100;old_locus_tag=AD12_2425 NZ_JJLK01000064.1 Protein Homology CDS 375909 377654 . - 0 ID=cds-WP_001593457.1;Parent=gene-AD12_RS11100;Dbxref=GenBank:WP_001593457.1;Name=WP_001593457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593457.1;locus_tag=AD12_RS11100;product=hypothetical protein;protein_id=WP_001593457.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 377715 378608 . - . ID=gene-AD12_RS11095;Name=AD12_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11095;old_locus_tag=AD12_2426 NZ_JJLK01000064.1 Protein Homology CDS 377715 378608 . - 0 ID=cds-WP_001593458.1;Parent=gene-AD12_RS11095;Dbxref=GenBank:WP_001593458.1;Name=WP_001593458.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593458.1;locus_tag=AD12_RS11095;product=nucleotidyltransferase domain-containing protein;protein_id=WP_001593458.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 378624 379586 . - . ID=gene-AD12_RS11090;Name=AD12_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11090;old_locus_tag=AD12_2427 NZ_JJLK01000064.1 Protein Homology CDS 378624 379586 . - 0 ID=cds-WP_001593459.1;Parent=gene-AD12_RS11090;Dbxref=GenBank:WP_001593459.1;Name=WP_001593459.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593459.1;locus_tag=AD12_RS11090;product=patatin-like phospholipase family protein;protein_id=WP_001593459.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 380558 387634 . + . ID=gene-AD12_RS11085;Name=yeeJ;gbkey=Gene;gene=yeeJ;gene_biotype=pseudogene;locus_tag=AD12_RS11085;old_locus_tag=AD12_2428;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 380558 387634 . + 0 ID=cds-AD12_RS11085;Parent=gene-AD12_RS11085;Note=internal stop;gbkey=CDS;gene=yeeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AD12_RS11085;product=inverse autotransporter adhesin YeeJ;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 387896 388948 . - . ID=gene-AD12_RS11080;Name=AD12_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS11080;old_locus_tag=AD12_2430 NZ_JJLK01000064.1 Protein Homology CDS 387896 388948 . - 0 ID=cds-WP_000477906.1;Parent=gene-AD12_RS11080;Dbxref=GenBank:WP_000477906.1;Name=WP_000477906.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AD12_RS11080;product=glycosyltransferase family 9 protein;protein_id=WP_000477906.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 389263 390579 . + . ID=gene-AD12_RS11075;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AD12_RS11075;old_locus_tag=AD12_2431 NZ_JJLK01000064.1 Protein Homology CDS 389263 390579 . + 0 ID=cds-WP_000378572.1;Parent=gene-AD12_RS11075;Dbxref=GenBank:WP_000378572.1;Name=WP_000378572.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=AD12_RS11075;product=shikimate transporter;protein_id=WP_000378572.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 390681 392135 . + . ID=gene-AD12_RS11070;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AD12_RS11070;old_locus_tag=AD12_2432 NZ_JJLK01000064.1 Protein Homology CDS 390681 392135 . + 0 ID=cds-WP_001060242.1;Parent=gene-AD12_RS11070;Dbxref=GenBank:WP_001060242.1;Name=WP_001060242.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AD12_RS11070;product=AMP nucleosidase;protein_id=WP_001060242.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 392478 393194 . + . ID=gene-AD12_RS11065;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AD12_RS11065;old_locus_tag=AD12_2433 NZ_JJLK01000064.1 Protein Homology CDS 392478 393194 . + 0 ID=cds-WP_000532912.1;Parent=gene-AD12_RS11065;Dbxref=GenBank:WP_000532912.1;Name=WP_000532912.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=AD12_RS11065;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532912.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 393648 393723 . - . ID=gene-AD12_RS11060;Name=AD12_RS11060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11060;old_locus_tag=AD12_2435 NZ_JJLK01000064.1 tRNAscan-SE tRNA 393648 393723 . - . ID=rna-AD12_RS11060;Parent=gene-AD12_RS11060;anticodon=(pos:complement(393688..393690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11060;product=tRNA-Asn NZ_JJLK01000064.1 tRNAscan-SE exon 393648 393723 . - . ID=exon-AD12_RS11060-1;Parent=rna-AD12_RS11060;anticodon=(pos:complement(393688..393690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11060;product=tRNA-Asn NZ_JJLK01000064.1 RefSeq gene 393824 395311 . - . ID=gene-AD12_RS11055;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AD12_RS11055;old_locus_tag=AD12_2436 NZ_JJLK01000064.1 Protein Homology CDS 393824 395311 . - 0 ID=cds-WP_077483005.1;Parent=gene-AD12_RS11055;Dbxref=GenBank:WP_077483005.1;Name=WP_077483005.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AD12_RS11055;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_077483005.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 395472 395547 . + . ID=gene-AD12_RS11050;Name=AD12_RS11050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11050;old_locus_tag=AD12_2437 NZ_JJLK01000064.1 tRNAscan-SE tRNA 395472 395547 . + . ID=rna-AD12_RS11050;Parent=gene-AD12_RS11050;anticodon=(pos:395505..395507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11050;product=tRNA-Asn NZ_JJLK01000064.1 tRNAscan-SE exon 395472 395547 . + . ID=exon-AD12_RS11050-1;Parent=rna-AD12_RS11050;anticodon=(pos:395505..395507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11050;product=tRNA-Asn NZ_JJLK01000064.1 RefSeq gene 395585 396535 . - . ID=gene-AD12_RS11045;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AD12_RS11045;old_locus_tag=AD12_2438 NZ_JJLK01000064.1 Protein Homology CDS 395585 396535 . - 0 ID=cds-WP_001011017.1;Parent=gene-AD12_RS11045;Dbxref=GenBank:WP_001011017.1;Name=WP_001011017.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416492.1;locus_tag=AD12_RS11045;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011017.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 396637 397554 . - . ID=gene-AD12_RS11040;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AD12_RS11040;old_locus_tag=AD12_2439 NZ_JJLK01000064.1 Protein Homology CDS 396637 397554 . - 0 ID=cds-WP_001011466.1;Parent=gene-AD12_RS11040;Dbxref=GenBank:WP_001011466.1;Name=WP_001011466.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AD12_RS11040;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011466.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 397880 397955 . + . ID=gene-AD12_RS11035;Name=AD12_RS11035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS11035;old_locus_tag=AD12_2440 NZ_JJLK01000064.1 tRNAscan-SE tRNA 397880 397955 . + . ID=rna-AD12_RS11035;Parent=gene-AD12_RS11035;anticodon=(pos:397913..397915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11035;product=tRNA-Asn NZ_JJLK01000064.1 tRNAscan-SE exon 397880 397955 . + . ID=exon-AD12_RS11035-1;Parent=rna-AD12_RS11035;anticodon=(pos:397913..397915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS11035;product=tRNA-Asn NZ_JJLK01000064.1 RefSeq gene 398011 398946 . - . ID=gene-AD12_RS11030;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AD12_RS11030;old_locus_tag=AD12_2441 NZ_JJLK01000064.1 Protein Homology CDS 398011 398946 . - 0 ID=cds-WP_000986348.1;Parent=gene-AD12_RS11030;Dbxref=GenBank:WP_000986348.1;Name=WP_000986348.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707892.1;locus_tag=AD12_RS11030;product=L%2CD-transpeptidase;protein_id=WP_000986348.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 399008 400087 . - . ID=gene-AD12_RS11025;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AD12_RS11025;old_locus_tag=AD12_2442 NZ_JJLK01000064.1 Protein Homology CDS 399008 400087 . - 0 ID=cds-WP_001193781.1;Parent=gene-AD12_RS11025;Dbxref=GenBank:WP_001193781.1;Name=WP_001193781.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AD12_RS11025;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193781.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 400099 400842 . - . ID=gene-AD12_RS11020;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AD12_RS11020;old_locus_tag=AD12_2443 NZ_JJLK01000064.1 Protein Homology CDS 400099 400842 . - 0 ID=cds-WP_001297350.1;Parent=gene-AD12_RS11020;Dbxref=GenBank:WP_001297350.1;Name=WP_001297350.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AD12_RS11020;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001297350.1;transl_table=11 NZ_JJLK01000064.1 RefSeq gene 400839 401384 . - . ID=gene-AD12_RS11015;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AD12_RS11015;old_locus_tag=AD12_2444 NZ_JJLK01000064.1 Protein Homology CDS 400839 401384 . - 0 ID=cds-WP_000973158.1;Parent=gene-AD12_RS11015;Dbxref=GenBank:WP_000973158.1;Name=WP_000973158.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AD12_RS11015;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973158.1;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 401518 401679 . - . ID=gene-AD12_RS29505;Name=AD12_RS29505;end_range=401679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29505;partial=true;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 401518 401679 . - 0 ID=cds-AD12_RS29505;Parent=gene-AD12_RS29505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=401679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AD12_RS29505;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 401688 401876 . - . ID=gene-AD12_RS29510;Name=AD12_RS29510;end_range=401876,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29510;partial=true;pseudo=true;start_range=.,401688 NZ_JJLK01000064.1 Protein Homology CDS 401688 401876 . - 0 ID=cds-AD12_RS29510;Parent=gene-AD12_RS29510;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=401876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD12_RS29510;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,401688;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 402858 403691 . + . ID=gene-AD12_RS11005;Name=AD12_RS11005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS11005;old_locus_tag=AD12_2446;partial=true;pseudo=true;start_range=.,402858 NZ_JJLK01000064.1 Protein Homology CDS 402858 403691 . + 0 ID=cds-AD12_RS11005;Parent=gene-AD12_RS11005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=AD12_RS11005;partial=true;product=phosphotriesterase-related protein;pseudo=true;start_range=.,402858;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 403731 404014 . - . ID=gene-AD12_RS26825;Name=AD12_RS26825;end_range=404014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS26825;partial=true;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 403731 404014 . - 0 ID=cds-AD12_RS26825;Parent=gene-AD12_RS26825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=404014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AD12_RS26825;partial=true;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_JJLK01000064.1 RefSeq pseudogene 404103 405711 . - . ID=gene-AD12_RS28075;Name=AD12_RS28075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28075;pseudo=true NZ_JJLK01000064.1 Protein Homology CDS 404103 405711 . - 0 ID=cds-AD12_RS28075;Parent=gene-AD12_RS28075;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612334.1;locus_tag=AD12_RS28075;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000065.1 1 9210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000065.1 RefSeq region 1 9210 . + . ID=NZ_JJLK01000065.1:1..9210;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000065.1 RefSeq pseudogene 1 1108 . - . ID=gene-AD12_RS26850;Name=AD12_RS26850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS26850;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000065.1 Protein Homology CDS 1 1108 . - 0 ID=cds-AD12_RS26850;Parent=gene-AD12_RS26850;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612334.1;locus_tag=AD12_RS26850;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 1403 1813 . - . ID=gene-AD12_RS10990;Name=AD12_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10990;old_locus_tag=AD12_2452 NZ_JJLK01000065.1 Protein Homology CDS 1403 1813 . - 0 ID=cds-WP_001221604.1;Parent=gene-AD12_RS10990;Dbxref=GenBank:WP_001221604.1;Name=WP_001221604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238421.1;locus_tag=AD12_RS10990;product=zinc-ribbon domain-containing protein;protein_id=WP_001221604.1;transl_table=11 NZ_JJLK01000065.1 RefSeq pseudogene 1999 2967 . + . ID=gene-AD12_RS28725;Name=AD12_RS28725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28725;pseudo=true NZ_JJLK01000065.1 Protein Homology CDS 1999 2967 . + 0 ID=cds-AD12_RS28725;Parent=gene-AD12_RS28725;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079827324.1;locus_tag=AD12_RS28725;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 2977 3369 . - . ID=gene-AD12_RS0124160;Name=AD12_RS0124160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124160 NZ_JJLK01000065.1 Protein Homology CDS 2977 3369 . - 0 ID=cds-WP_001632154.1;Parent=gene-AD12_RS0124160;Dbxref=GenBank:WP_001632154.1;Name=WP_001632154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271005.1;locus_tag=AD12_RS0124160;product=putative zinc ribbon protein;protein_id=WP_001632154.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 3535 4104 . - . ID=gene-AD12_RS10980;Name=AD12_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10980;old_locus_tag=AD12_2456 NZ_JJLK01000065.1 Protein Homology CDS 3535 4104 . - 0 ID=cds-WP_000221529.1;Parent=gene-AD12_RS10980;Dbxref=GenBank:WP_000221529.1;Name=WP_000221529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238748.1;locus_tag=AD12_RS10980;product=inovirus Gp2 family protein;protein_id=WP_000221529.1;transl_table=11 NZ_JJLK01000065.1 RefSeq pseudogene 4280 4476 . + . ID=gene-AD12_RS29515;Name=AD12_RS29515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29515;old_locus_tag=AD12_2457;pseudo=true NZ_JJLK01000065.1 Protein Homology CDS 4280 4476 . + 0 ID=cds-AD12_RS29515;Parent=gene-AD12_RS29515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547002.1;locus_tag=AD12_RS29515;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 4820 4996 . - . ID=gene-AD12_RS10975;Name=AD12_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10975;old_locus_tag=AD12_2458 NZ_JJLK01000065.1 Protein Homology CDS 4820 4996 . - 0 ID=cds-WP_001344112.1;Parent=gene-AD12_RS10975;Dbxref=GenBank:WP_001344112.1;Name=WP_001344112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704109.1;locus_tag=AD12_RS10975;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_001344112.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 5297 5563 . - . ID=gene-AD12_RS0124175;Name=AD12_RS0124175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124175 NZ_JJLK01000065.1 Protein Homology CDS 5297 5563 . - 0 ID=cds-WP_000840364.1;Parent=gene-AD12_RS0124175;Dbxref=GenBank:WP_000840364.1;Name=WP_000840364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840368.1;locus_tag=AD12_RS0124175;product=hypothetical protein;protein_id=WP_000840364.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 5704 5910 . + . ID=gene-AD12_RS28080;Name=AD12_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28080;old_locus_tag=AD12_2459 NZ_JJLK01000065.1 Protein Homology CDS 5704 5910 . + 0 ID=cds-WP_000235212.1;Parent=gene-AD12_RS28080;Dbxref=GenBank:WP_000235212.1;Name=WP_000235212.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211309.1;locus_tag=AD12_RS28080;product=helix-turn-helix transcriptional regulator;protein_id=WP_000235212.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 6005 6607 . + . ID=gene-AD12_RS10965;Name=AD12_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10965;old_locus_tag=AD12_2460 NZ_JJLK01000065.1 Protein Homology CDS 6005 6607 . + 0 ID=cds-WP_000813456.1;Parent=gene-AD12_RS10965;Dbxref=GenBank:WP_000813456.1;Name=WP_000813456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546339.1;locus_tag=AD12_RS10965;product=hypothetical protein;protein_id=WP_000813456.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 6513 6710 . - . ID=gene-AD12_RS29810;Name=AD12_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29810 NZ_JJLK01000065.1 Protein Homology CDS 6513 6710 . - 0 ID=cds-WP_001333284.1;Parent=gene-AD12_RS29810;Dbxref=GenBank:WP_001333284.1;Name=WP_001333284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001333284.1;locus_tag=AD12_RS29810;product=hypothetical protein;protein_id=WP_001333284.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 6779 6976 . + . ID=gene-AD12_RS26870;Name=AD12_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26870;old_locus_tag=AD12_2461 NZ_JJLK01000065.1 Protein Homology CDS 6779 6976 . + 0 ID=cds-WP_001329788.1;Parent=gene-AD12_RS26870;Dbxref=GenBank:WP_001329788.1;Name=WP_001329788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015953093.1;locus_tag=AD12_RS26870;product=hypothetical protein;protein_id=WP_001329788.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 7793 8710 . + . ID=gene-AD12_RS10960;Name=AD12_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10960;old_locus_tag=AD12_2463 NZ_JJLK01000065.1 Protein Homology CDS 7793 8710 . + 0 ID=cds-WP_000250228.1;Parent=gene-AD12_RS10960;Dbxref=GenBank:WP_000250228.1;Name=WP_000250228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230784.1;locus_tag=AD12_RS10960;product=hypothetical protein;protein_id=WP_000250228.1;transl_table=11 NZ_JJLK01000065.1 RefSeq gene 8795 9210 . + . ID=gene-AD12_RS10955;Name=AD12_RS10955;end_range=9210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10955;old_locus_tag=AD12_2464;partial=true NZ_JJLK01000065.1 Protein Homology CDS 8795 9210 . + 0 ID=cds-WP_001336041.1;Parent=gene-AD12_RS10955;Dbxref=GenBank:WP_001336041.1;Name=WP_001336041.1;Ontology_term=GO:0005525;end_range=9210,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AD12_RS10955;partial=true;product=YfjP family GTPase;protein_id=WP_001336041.1;transl_table=11 ##sequence-region NZ_JJLK01000066.1 1 1854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000066.1 RefSeq region 1 1854 . + . ID=NZ_JJLK01000066.1:1..1854;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000066.1 RefSeq gene 1 1854 . + . ID=gene-AD12_RS0124185;Name=AD12_RS0124185;end_range=1854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124185;old_locus_tag=AD12_2465;partial=true;start_range=.,1 NZ_JJLK01000066.1 Protein Homology CDS 1 1854 . + 0 ID=cds-WP_032286512.1;Parent=gene-AD12_RS0124185;Dbxref=GenBank:WP_032286512.1;Name=WP_032286512.1;end_range=1854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AD12_RS0124185;partial=true;product=AIDA repeat-containing protein;protein_id=WP_032286512.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000067.1 1 3492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000067.1 RefSeq region 1 3492 . + . ID=NZ_JJLK01000067.1:1..3492;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000067.1 RefSeq gene 1 197 . - . ID=gene-AD12_RS0124190;Name=AD12_RS0124190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124190;old_locus_tag=AD12_2466;partial=true;start_range=.,1 NZ_JJLK01000067.1 Protein Homology CDS 1 197 . - 0 ID=cds-WP_000179197.1;Parent=gene-AD12_RS0124190;Dbxref=GenBank:WP_000179197.1;Name=WP_000179197.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD12_RS0124190;partial=true;product=IS1 family transposase;protein_id=WP_000179197.1;start_range=.,1;transl_table=11 NZ_JJLK01000067.1 RefSeq gene 553 1467 . + . ID=gene-AD12_RS10950;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=AD12_RS10950;old_locus_tag=AD12_2467 NZ_JJLK01000067.1 Protein Homology CDS 553 1467 . + 0 ID=cds-WP_021543899.1;Parent=gene-AD12_RS10950;Dbxref=GenBank:WP_021543899.1;Name=WP_021543899.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AD12_RS10950;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_021543899.1;transl_table=11 NZ_JJLK01000067.1 RefSeq gene 1467 2294 . + . ID=gene-AD12_RS10945;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=AD12_RS10945;old_locus_tag=AD12_2468 NZ_JJLK01000067.1 Protein Homology CDS 1467 2294 . + 0 ID=cds-WP_000983710.1;Parent=gene-AD12_RS10945;Dbxref=GenBank:WP_000983710.1;Name=WP_000983710.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707261.1;locus_tag=AD12_RS10945;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000983710.1;transl_table=11 NZ_JJLK01000067.1 RefSeq gene 2291 3148 . + . ID=gene-AD12_RS10940;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=AD12_RS10940;old_locus_tag=AD12_2469 NZ_JJLK01000067.1 Protein Homology CDS 2291 3148 . + 0 ID=cds-WP_032286514.1;Parent=gene-AD12_RS10940;Dbxref=GenBank:WP_032286514.1;Name=WP_032286514.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707260.1;locus_tag=AD12_RS10940;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_032286514.1;transl_table=11 NZ_JJLK01000067.1 RefSeq pseudogene 3145 3492 . + . ID=gene-AD12_RS10935;Name=sitD;end_range=3492,.;gbkey=Gene;gene=sitD;gene_biotype=pseudogene;locus_tag=AD12_RS10935;old_locus_tag=AD12_2470;partial=true;pseudo=true NZ_JJLK01000067.1 Protein Homology CDS 3145 3492 . + 0 ID=cds-AD12_RS10935;Parent=gene-AD12_RS10935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3492,.;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707259.1;locus_tag=AD12_RS10935;partial=true;product=iron/manganese ABC transporter permease subunit SitD;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000068.1 1 477395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000068.1 RefSeq region 1 477395 . + . ID=NZ_JJLK01000068.1:1..477395;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000068.1 RefSeq gene 199 567 . + . ID=gene-AD12_RS0124200;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;locus_tag=AD12_RS0124200;old_locus_tag=AD12_2472 NZ_JJLK01000068.1 Protein Homology CDS 199 567 . + 0 ID=cds-WP_032286518.1;Parent=gene-AD12_RS0124200;Dbxref=GenBank:WP_032286518.1;Name=WP_032286518.1;gbkey=CDS;gene=cbeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280950.1;locus_tag=AD12_RS0124200;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_032286518.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 657 1034 . + . ID=gene-AD12_RS0124205;Name=AD12_RS0124205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124205;old_locus_tag=AD12_2473 NZ_JJLK01000068.1 Protein Homology CDS 657 1034 . + 0 ID=cds-WP_001614648.1;Parent=gene-AD12_RS0124205;Dbxref=GenBank:WP_001614648.1;Name=WP_001614648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708773.1;locus_tag=AD12_RS0124205;product=TA system toxin CbtA family protein;protein_id=WP_001614648.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 1031 1207 . + . ID=gene-AD12_RS10930;Name=AD12_RS10930;end_range=1207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS10930;old_locus_tag=AD12_2474;partial=true;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 1031 1207 . + 0 ID=cds-AD12_RS10930;Parent=gene-AD12_RS10930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000761660.1;locus_tag=AD12_RS10930;partial=true;product=DUF5983 family protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 1268 1360 . + . ID=gene-AD12_RS28735;Name=AD12_RS28735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28735;partial=true;pseudo=true;start_range=.,1268 NZ_JJLK01000068.1 Protein Homology CDS 1268 1360 . + 0 ID=cds-AD12_RS28735;Parent=gene-AD12_RS28735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AD12_RS28735;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,1268;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 1519 1840 . + . ID=gene-AD12_RS29520;Name=AD12_RS29520;end_range=1840,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29520;partial=true;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 1519 1840 . + 0 ID=cds-AD12_RS29520;Parent=gene-AD12_RS29520;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558147.1;locus_tag=AD12_RS29520;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 2032 3572 . + . ID=gene-AD12_RS0124215;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AD12_RS0124215;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 2032 3572 . + 0 ID=cds-AD12_RS0124215;Parent=gene-AD12_RS0124215;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298859.1;locus_tag=AD12_RS0124215;product=IS21-like element ISEc12 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 3587 4333 . + . ID=gene-AD12_RS10925;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AD12_RS10925;old_locus_tag=AD12_2477 NZ_JJLK01000068.1 Protein Homology CDS 3587 4333 . + 0 ID=cds-WP_032286520.1;Parent=gene-AD12_RS10925;Dbxref=GenBank:WP_032286520.1;Name=WP_032286520.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514323.1;locus_tag=AD12_RS10925;product=IS21-like element ISEc12 family helper ATPase IstB;protein_id=WP_032286520.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 4761 5132 . + . ID=gene-AD12_RS26890;Name=AD12_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS26890 NZ_JJLK01000068.1 Protein Homology CDS 4761 5132 . + 0 ID=cds-WP_001295631.1;Parent=gene-AD12_RS26890;Dbxref=GenBank:WP_001295631.1;Name=WP_001295631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=AD12_RS26890;product=IS110 family transposase;protein_id=WP_001295631.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 5403 5768 . + . ID=gene-AD12_RS29525;Name=AD12_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29525 NZ_JJLK01000068.1 Protein Homology CDS 5403 5768 . + 0 ID=cds-WP_001282181.1;Parent=gene-AD12_RS29525;Dbxref=GenBank:WP_001282181.1;Name=WP_001282181.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282181.1;locus_tag=AD12_RS29525;product=EutP/PduV family microcompartment system protein;protein_id=WP_001282181.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 5869 6198 . - . ID=gene-AD12_RS10915;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AD12_RS10915;old_locus_tag=AD12_2480 NZ_JJLK01000068.1 Protein Homology CDS 5869 6198 . - 0 ID=cds-WP_000450409.1;Parent=gene-AD12_RS10915;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AD12_RS10915;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 6370 7428 . - . ID=gene-AD12_RS10910;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AD12_RS10910;old_locus_tag=AD12_2481 NZ_JJLK01000068.1 Protein Homology CDS 6370 7428 . - 0 ID=cds-WP_032286521.1;Parent=gene-AD12_RS10910;Dbxref=GenBank:WP_032286521.1;Name=WP_032286521.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AD12_RS10910;product=FUSC family protein;protein_id=WP_032286521.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 7626 8099 . - . ID=gene-AD12_RS10905;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AD12_RS10905;old_locus_tag=AD12_2482 NZ_JJLK01000068.1 Protein Homology CDS 7626 8099 . - 0 ID=cds-WP_001105385.1;Parent=gene-AD12_RS10905;Dbxref=GenBank:WP_001105385.1;Name=WP_001105385.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AD12_RS10905;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105385.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 8217 9383 . - . ID=gene-AD12_RS10900;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AD12_RS10900;old_locus_tag=AD12_2483 NZ_JJLK01000068.1 Protein Homology CDS 8217 9383 . - 0 ID=cds-WP_000830142.1;Parent=gene-AD12_RS10900;Dbxref=GenBank:WP_000830142.1;Name=WP_000830142.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AD12_RS10900;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000830142.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 9592 11019 . + . ID=gene-AD12_RS10895;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AD12_RS10895;old_locus_tag=AD12_2484 NZ_JJLK01000068.1 Protein Homology CDS 9592 11019 . + 0 ID=cds-WP_077745031.1;Parent=gene-AD12_RS10895;Dbxref=GenBank:WP_077745031.1;Name=WP_077745031.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310840.1;locus_tag=AD12_RS10895;product=exodeoxyribonuclease I;protein_id=WP_077745031.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 11062 11289 . - . ID=gene-AD12_RS10890;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AD12_RS10890;old_locus_tag=AD12_2485 NZ_JJLK01000068.1 Protein Homology CDS 11062 11289 . - 0 ID=cds-WP_000985273.1;Parent=gene-AD12_RS10890;Dbxref=GenBank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AD12_RS10890;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 11303 12361 . - . ID=gene-AD12_RS10885;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AD12_RS10885;old_locus_tag=AD12_2486 NZ_JJLK01000068.1 Protein Homology CDS 11303 12361 . - 0 ID=cds-WP_000492324.1;Parent=gene-AD12_RS10885;Dbxref=GenBank:WP_000492324.1;Name=WP_000492324.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AD12_RS10885;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_000492324.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 12540 13898 . - . ID=gene-AD12_RS10880;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AD12_RS10880;old_locus_tag=AD12_2487 NZ_JJLK01000068.1 Protein Homology CDS 12540 13898 . - 0 ID=cds-WP_000019197.1;Parent=gene-AD12_RS10880;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AD12_RS10880;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 13888 13950 . - . ID=gene-AD12_RS28745;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AD12_RS28745 NZ_JJLK01000068.1 Protein Homology CDS 13888 13950 . - 0 ID=cds-WP_010723108.1;Parent=gene-AD12_RS28745;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AD12_RS28745;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 14165 15094 . - . ID=gene-AD12_RS10875;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AD12_RS10875;old_locus_tag=AD12_2488 NZ_JJLK01000068.1 Protein Homology CDS 14165 15094 . - 0 ID=cds-WP_000803356.1;Parent=gene-AD12_RS10875;Dbxref=GenBank:WP_000803356.1;Name=WP_000803356.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AD12_RS10875;product=LysR substrate-binding domain-containing protein;protein_id=WP_000803356.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 15140 15964 . - . ID=gene-AD12_RS10870;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AD12_RS10870;old_locus_tag=AD12_2489 NZ_JJLK01000068.1 Protein Homology CDS 15140 15964 . - 0 ID=cds-WP_032286523.1;Parent=gene-AD12_RS10870;Dbxref=GenBank:WP_032286523.1;Name=WP_032286523.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AD12_RS10870;product=SDR family oxidoreductase;protein_id=WP_032286523.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 16047 16301 . - . ID=gene-AD12_RS10865;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AD12_RS10865;old_locus_tag=AD12_2490 NZ_JJLK01000068.1 Protein Homology CDS 16047 16301 . - 0 ID=cds-WP_000767829.1;Parent=gene-AD12_RS10865;Dbxref=GenBank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AD12_RS10865;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 16298 16549 . - . ID=gene-AD12_RS10860;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AD12_RS10860;old_locus_tag=AD12_2491 NZ_JJLK01000068.1 Protein Homology CDS 16298 16549 . - 0 ID=cds-WP_001259255.1;Parent=gene-AD12_RS10860;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AD12_RS10860;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 16832 16882 . + . ID=gene-AD12_RS26895;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AD12_RS26895 NZ_JJLK01000068.1 Protein Homology CDS 16832 16882 . + 0 ID=cds-WP_001364200.1;Parent=gene-AD12_RS26895;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AD12_RS26895;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JJLK01000068.1 cmsearch sequence_feature 16858 16981 . + . ID=id-NZ_JJLK01000068.1:16858..16981;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000068.1 RefSeq gene 17028 17927 . + . ID=gene-AD12_RS10855;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AD12_RS10855;old_locus_tag=AD12_2492 NZ_JJLK01000068.1 Protein Homology CDS 17028 17927 . + 0 ID=cds-WP_000131782.1;Parent=gene-AD12_RS10855;Dbxref=GenBank:WP_000131782.1;Name=WP_000131782.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AD12_RS10855;product=ATP phosphoribosyltransferase;protein_id=WP_000131782.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 17933 19237 . + . ID=gene-AD12_RS10850;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AD12_RS10850;old_locus_tag=AD12_2493 NZ_JJLK01000068.1 Protein Homology CDS 17933 19237 . + 0 ID=cds-WP_021526186.1;Parent=gene-AD12_RS10850;Dbxref=GenBank:WP_021526186.1;Name=WP_021526186.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310848.1;locus_tag=AD12_RS10850;product=histidinol dehydrogenase;protein_id=WP_021526186.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 19234 20304 . + . ID=gene-AD12_RS10845;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AD12_RS10845;old_locus_tag=AD12_2494 NZ_JJLK01000068.1 Protein Homology CDS 19234 20304 . + 0 ID=cds-WP_021526185.1;Parent=gene-AD12_RS10845;Dbxref=GenBank:WP_021526185.1;Name=WP_021526185.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310849.1;locus_tag=AD12_RS10845;product=histidinol-phosphate transaminase;protein_id=WP_021526185.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 20304 21371 . + . ID=gene-AD12_RS10840;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AD12_RS10840;old_locus_tag=AD12_2495 NZ_JJLK01000068.1 Protein Homology CDS 20304 21371 . + 0 ID=cds-WP_021526184.1;Parent=gene-AD12_RS10840;Dbxref=GenBank:WP_021526184.1;Name=WP_021526184.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AD12_RS10840;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_021526184.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 21371 21961 . + . ID=gene-AD12_RS10835;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AD12_RS10835;old_locus_tag=AD12_2496 NZ_JJLK01000068.1 Protein Homology CDS 21371 21961 . + 0 ID=cds-WP_001103560.1;Parent=gene-AD12_RS10835;Dbxref=GenBank:WP_001103560.1;Name=WP_001103560.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AD12_RS10835;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 21961 22698 . + . ID=gene-AD12_RS10830;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AD12_RS10830;old_locus_tag=AD12_2497 NZ_JJLK01000068.1 Protein Homology CDS 21961 22698 . + 0 ID=cds-WP_032286524.1;Parent=gene-AD12_RS10830;Dbxref=GenBank:WP_032286524.1;Name=WP_032286524.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AD12_RS10830;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_032286524.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 22680 23456 . + . ID=gene-AD12_RS10825;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AD12_RS10825;old_locus_tag=AD12_2498 NZ_JJLK01000068.1 Protein Homology CDS 22680 23456 . + 0 ID=cds-WP_000880182.1;Parent=gene-AD12_RS10825;Dbxref=GenBank:WP_000880182.1;Name=WP_000880182.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AD12_RS10825;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880182.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 23450 24058 . + . ID=gene-AD12_RS10820;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AD12_RS10820;old_locus_tag=AD12_2499 NZ_JJLK01000068.1 Protein Homology CDS 23450 24058 . + 0 ID=cds-WP_000954910.1;Parent=gene-AD12_RS10820;Dbxref=GenBank:WP_000954910.1;Name=WP_000954910.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774927.1;locus_tag=AD12_RS10820;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954910.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 24097 25212 . - . ID=gene-AD12_RS10815;Name=wbdC;gbkey=Gene;gene=wbdC;gene_biotype=protein_coding;locus_tag=AD12_RS10815;old_locus_tag=AD12_2500 NZ_JJLK01000068.1 Protein Homology CDS 24097 25212 . - 0 ID=cds-WP_001392323.1;Parent=gene-AD12_RS10815;Dbxref=GenBank:WP_001392323.1;Name=WP_001392323.1;gbkey=CDS;gene=wbdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184789.1;locus_tag=AD12_RS10815;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2Coctacis-undecaprenol 3-alpha-mannosyltransferase WbdC;protein_id=WP_001392323.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 25222 26367 . - . ID=gene-AD12_RS10810;Name=AD12_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10810;old_locus_tag=AD12_2501 NZ_JJLK01000068.1 Protein Homology CDS 25222 26367 . - 0 ID=cds-WP_001739457.1;Parent=gene-AD12_RS10810;Dbxref=GenBank:WP_001739457.1;Name=WP_001739457.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809192.1;locus_tag=AD12_RS10810;product=glycosyltransferase family 4 protein;protein_id=WP_001739457.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 26431 30072 . - . ID=gene-AD12_RS10805;Name=AD12_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10805;old_locus_tag=AD12_2502 NZ_JJLK01000068.1 Protein Homology CDS 26431 30072 . - 0 ID=cds-WP_032286525.1;Parent=gene-AD12_RS10805;Dbxref=GenBank:WP_032286525.1;Name=WP_032286525.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223552.1;locus_tag=AD12_RS10805;product=glycosyltransferase;protein_id=WP_032286525.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 30075 31352 . - . ID=gene-AD12_RS10800;Name=AD12_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10800;old_locus_tag=AD12_2503 NZ_JJLK01000068.1 Protein Homology CDS 30075 31352 . - 0 ID=cds-WP_016240077.1;Parent=gene-AD12_RS10800;Dbxref=GenBank:WP_016240077.1;Name=WP_016240077.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365812.1;locus_tag=AD12_RS10800;product=class I SAM-dependent methyltransferase;protein_id=WP_016240077.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 31352 32566 . - . ID=gene-AD12_RS10795;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;locus_tag=AD12_RS10795;old_locus_tag=AD12_2504 NZ_JJLK01000068.1 Protein Homology CDS 31352 32566 . - 0 ID=cds-WP_032286526.1;Parent=gene-AD12_RS10795;Dbxref=GenBank:WP_032286526.1;Name=WP_032286526.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120467.1;locus_tag=AD12_RS10795;product=O8 family O-antigen export ABC transporter ATP-binding subunit;protein_id=WP_032286526.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 32566 33360 . - . ID=gene-AD12_RS10790;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;locus_tag=AD12_RS10790;old_locus_tag=AD12_2505 NZ_JJLK01000068.1 Protein Homology CDS 32566 33360 . - 0 ID=cds-WP_032286527.1;Parent=gene-AD12_RS10790;Dbxref=GenBank:WP_032286527.1;Name=WP_032286527.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308747.1;locus_tag=AD12_RS10790;product=O8 family O-antigen export ABC transporter permease subunit;protein_id=WP_032286527.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 33362 34738 . - . ID=gene-AD12_RS10785;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=AD12_RS10785;old_locus_tag=AD12_2506 NZ_JJLK01000068.1 Protein Homology CDS 33362 34738 . - 0 ID=cds-WP_032286528.1;Parent=gene-AD12_RS10785;Dbxref=GenBank:WP_032286528.1;Name=WP_032286528.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003596869.1;locus_tag=AD12_RS10785;product=O9 family phosphomannomutase RfbK;protein_id=WP_032286528.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 34762 36177 . - . ID=gene-AD12_RS10780;Name=AD12_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10780;old_locus_tag=AD12_2507 NZ_JJLK01000068.1 Protein Homology CDS 34762 36177 . - 0 ID=cds-WP_032286529.1;Parent=gene-AD12_RS10780;Dbxref=GenBank:WP_032286529.1;Name=WP_032286529.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=AD12_RS10780;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_032286529.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 36459 36743 . - . ID=gene-AD12_RS0124230;Name=AD12_RS0124230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124230 NZ_JJLK01000068.1 Protein Homology CDS 36459 36743 . - 0 ID=cds-WP_032286530.1;Parent=gene-AD12_RS0124230;Dbxref=GenBank:WP_032286530.1;Name=WP_032286530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088887.1;locus_tag=AD12_RS0124230;product=hypothetical protein;protein_id=WP_032286530.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 37017 37133 . + . ID=gene-AD12_RS29530;Name=AD12_RS29530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29530;partial=true;pseudo=true;start_range=.,37017 NZ_JJLK01000068.1 Protein Homology CDS 37017 37133 . + 0 ID=cds-AD12_RS29530;Parent=gene-AD12_RS29530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AD12_RS29530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,37017;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 37327 38304 . - . ID=gene-AD12_RS10770;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AD12_RS10770;old_locus_tag=AD12_2509 NZ_JJLK01000068.1 Protein Homology CDS 37327 38304 . - 0 ID=cds-WP_001362980.1;Parent=gene-AD12_RS10770;Dbxref=GenBank:WP_001362980.1;Name=WP_001362980.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AD12_RS10770;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_001362980.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 38450 39616 . - . ID=gene-AD12_RS10765;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AD12_RS10765;old_locus_tag=AD12_2510 NZ_JJLK01000068.1 Protein Homology CDS 38450 39616 . - 0 ID=cds-WP_032286533.1;Parent=gene-AD12_RS10765;Dbxref=GenBank:WP_032286533.1;Name=WP_032286533.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416532.1;locus_tag=AD12_RS10765;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032286533.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 39862 41268 . - . ID=gene-AD12_RS10760;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AD12_RS10760;old_locus_tag=AD12_2511 NZ_JJLK01000068.1 Protein Homology CDS 39862 41268 . - 0 ID=cds-WP_032286534.1;Parent=gene-AD12_RS10760;Dbxref=GenBank:WP_032286534.1;Name=WP_032286534.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707923.1;locus_tag=AD12_RS10760;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032286534.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 41428 42270 . - . ID=gene-AD12_RS10755;Name=AD12_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10755;old_locus_tag=AD12_2512 NZ_JJLK01000068.1 Protein Homology CDS 41428 42270 . - 0 ID=cds-WP_032286535.1;Parent=gene-AD12_RS10755;Dbxref=GenBank:WP_032286535.1;Name=WP_032286535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534198.1;locus_tag=AD12_RS10755;product=glycosyltransferase;protein_id=WP_032286535.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 42294 43481 . - . ID=gene-AD12_RS0124235;Name=AD12_RS0124235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124235;old_locus_tag=AD12_2513 NZ_JJLK01000068.1 Protein Homology CDS 42294 43481 . - 0 ID=cds-WP_071999186.1;Parent=gene-AD12_RS0124235;Dbxref=GenBank:WP_071999186.1;Name=WP_071999186.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF016357.6;locus_tag=AD12_RS0124235;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_071999186.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 43478 44350 . - . ID=gene-AD12_RS25650;Name=AD12_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS25650;old_locus_tag=AD12_2514 NZ_JJLK01000068.1 Protein Homology CDS 43478 44350 . - 0 ID=cds-WP_050480831.1;Parent=gene-AD12_RS25650;Dbxref=GenBank:WP_050480831.1;Name=WP_050480831.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF021616.6;locus_tag=AD12_RS25650;product=glycosyltransferase family 2 protein;protein_id=WP_050480831.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 44359 44757 . - . ID=gene-AD12_RS0124245;Name=AD12_RS0124245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124245 NZ_JJLK01000068.1 Protein Homology CDS 44359 44757 . - 0 ID=cds-WP_032286538.1;Parent=gene-AD12_RS0124245;Dbxref=GenBank:WP_032286538.1;Name=WP_032286538.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535285.1;locus_tag=AD12_RS0124245;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_032286538.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 44782 45669 . - . ID=gene-AD12_RS0124250;Name=AD12_RS0124250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124250;old_locus_tag=AD12_2515 NZ_JJLK01000068.1 Protein Homology CDS 44782 45669 . - 0 ID=cds-WP_050480832.1;Parent=gene-AD12_RS0124250;Dbxref=GenBank:WP_050480832.1;Name=WP_050480832.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF025025.6;locus_tag=AD12_RS0124250;product=glycosyltransferase family 2 protein;protein_id=WP_050480832.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 45685 46665 . - . ID=gene-AD12_RS10750;Name=AD12_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10750;old_locus_tag=AD12_2516 NZ_JJLK01000068.1 Protein Homology CDS 45685 46665 . - 0 ID=cds-WP_032286539.1;Parent=gene-AD12_RS10750;Dbxref=GenBank:WP_032286539.1;Name=WP_032286539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.6;locus_tag=AD12_RS10750;product=EpsG family protein;protein_id=WP_032286539.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 46715 47965 . - . ID=gene-AD12_RS10745;Name=AD12_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10745;old_locus_tag=AD12_2517 NZ_JJLK01000068.1 Protein Homology CDS 46715 47965 . - 0 ID=cds-WP_032286540.1;Parent=gene-AD12_RS10745;Dbxref=GenBank:WP_032286540.1;Name=WP_032286540.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003844308.1;locus_tag=AD12_RS10745;product=flippase;protein_id=WP_032286540.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 47982 48524 . - . ID=gene-AD12_RS10740;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AD12_RS10740;old_locus_tag=AD12_2518 NZ_JJLK01000068.1 Protein Homology CDS 47982 48524 . - 0 ID=cds-WP_032286542.1;Parent=gene-AD12_RS10740;Dbxref=GenBank:WP_032286542.1;Name=WP_032286542.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100796.1;locus_tag=AD12_RS10740;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_032286542.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 48529 49407 . - . ID=gene-AD12_RS10735;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD12_RS10735;old_locus_tag=AD12_2519 NZ_JJLK01000068.1 Protein Homology CDS 48529 49407 . - 0 ID=cds-WP_032286543.1;Parent=gene-AD12_RS10735;Dbxref=GenBank:WP_032286543.1;Name=WP_032286543.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=AD12_RS10735;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032286543.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 49465 50364 . - . ID=gene-AD12_RS10730;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AD12_RS10730;old_locus_tag=AD12_2520 NZ_JJLK01000068.1 Protein Homology CDS 49465 50364 . - 0 ID=cds-WP_032286544.1;Parent=gene-AD12_RS10730;Dbxref=GenBank:WP_032286544.1;Name=WP_032286544.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707935.1;locus_tag=AD12_RS10730;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_032286544.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 50364 51449 . - . ID=gene-AD12_RS10725;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AD12_RS10725;old_locus_tag=AD12_2521 NZ_JJLK01000068.1 Protein Homology CDS 50364 51449 . - 0 ID=cds-WP_032286546.1;Parent=gene-AD12_RS10725;Dbxref=GenBank:WP_032286546.1;Name=WP_032286546.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416545.1;locus_tag=AD12_RS10725;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_032286546.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 51822 52715 . - . ID=gene-AD12_RS10720;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AD12_RS10720;old_locus_tag=AD12_2522 NZ_JJLK01000068.1 Protein Homology CDS 51822 52715 . - 0 ID=cds-WP_000183060.1;Parent=gene-AD12_RS10720;Dbxref=GenBank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AD12_RS10720;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183060.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 52890 54284 . - . ID=gene-AD12_RS10715;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AD12_RS10715;old_locus_tag=AD12_2523 NZ_JJLK01000068.1 Protein Homology CDS 52890 54284 . - 0 ID=cds-WP_032286547.1;Parent=gene-AD12_RS10715;Dbxref=GenBank:WP_032286547.1;Name=WP_032286547.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416547.1;locus_tag=AD12_RS10715;product=colanic acid biosynthesis protein WcaM;protein_id=WP_032286547.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 54295 55515 . - . ID=gene-AD12_RS10710;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AD12_RS10710;old_locus_tag=AD12_2524 NZ_JJLK01000068.1 Protein Homology CDS 54295 55515 . - 0 ID=cds-WP_032286548.1;Parent=gene-AD12_RS10710;Dbxref=GenBank:WP_032286548.1;Name=WP_032286548.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AD12_RS10710;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_032286548.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 55512 56792 . - . ID=gene-AD12_RS10705;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AD12_RS10705;old_locus_tag=AD12_2525 NZ_JJLK01000068.1 Protein Homology CDS 55512 56792 . - 0 ID=cds-WP_032286550.1;Parent=gene-AD12_RS10705;Dbxref=GenBank:WP_032286550.1;Name=WP_032286550.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AD12_RS10705;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_032286550.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 57152 58630 . - . ID=gene-AD12_RS10700;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AD12_RS10700;old_locus_tag=AD12_2526 NZ_JJLK01000068.1 Protein Homology CDS 57152 58630 . - 0 ID=cds-WP_032286551.1;Parent=gene-AD12_RS10700;Dbxref=GenBank:WP_032286551.1;Name=WP_032286551.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AD12_RS10700;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_032286551.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 58632 60026 . - . ID=gene-AD12_RS10695;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AD12_RS10695;old_locus_tag=AD12_2527 NZ_JJLK01000068.1 Protein Homology CDS 58632 60026 . - 0 ID=cds-WP_000183124.1;Parent=gene-AD12_RS10695;Dbxref=GenBank:WP_000183124.1;Name=WP_000183124.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=AD12_RS10695;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183124.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 60081 61451 . - . ID=gene-AD12_RS10690;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AD12_RS10690;old_locus_tag=AD12_2528 NZ_JJLK01000068.1 Protein Homology CDS 60081 61451 . - 0 ID=cds-WP_032286553.1;Parent=gene-AD12_RS10690;Dbxref=GenBank:WP_032286553.1;Name=WP_032286553.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=AD12_RS10690;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_032286553.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 61644 63080 . - . ID=gene-AD12_RS10685;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AD12_RS10685;old_locus_tag=AD12_2529 NZ_JJLK01000068.1 Protein Homology CDS 61644 63080 . - 0 ID=cds-WP_000079291.1;Parent=gene-AD12_RS10685;Dbxref=GenBank:WP_000079291.1;Name=WP_000079291.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AD12_RS10685;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079291.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 63083 64306 . - . ID=gene-AD12_RS10680;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AD12_RS10680;old_locus_tag=AD12_2530 NZ_JJLK01000068.1 Protein Homology CDS 63083 64306 . - 0 ID=cds-WP_000699721.1;Parent=gene-AD12_RS10680;Dbxref=GenBank:WP_000699721.1;Name=WP_000699721.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AD12_RS10680;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699721.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 64303 64782 . - . ID=gene-AD12_RS10675;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=AD12_RS10675;old_locus_tag=AD12_2531 NZ_JJLK01000068.1 Protein Homology CDS 64303 64782 . - 0 ID=cds-WP_000479826.1;Parent=gene-AD12_RS10675;Dbxref=GenBank:WP_000479826.1;Name=WP_000479826.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AD12_RS10675;product=GDP-mannose mannosyl hydrolase;protein_id=WP_000479826.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 64785 65750 . - . ID=gene-AD12_RS10670;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AD12_RS10670;old_locus_tag=AD12_2532 NZ_JJLK01000068.1 Protein Homology CDS 64785 65750 . - 0 ID=cds-WP_000043652.1;Parent=gene-AD12_RS10670;Dbxref=GenBank:WP_000043652.1;Name=WP_000043652.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416556.1;locus_tag=AD12_RS10670;product=GDP-L-fucose synthase;protein_id=WP_000043652.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 65753 66874 . - . ID=gene-AD12_RS10665;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AD12_RS10665;old_locus_tag=AD12_2533 NZ_JJLK01000068.1 Protein Homology CDS 65753 66874 . - 0 ID=cds-WP_000048190.1;Parent=gene-AD12_RS10665;Dbxref=GenBank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AD12_RS10665;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 66900 67448 . - . ID=gene-AD12_RS10660;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AD12_RS10660;old_locus_tag=AD12_2534 NZ_JJLK01000068.1 Protein Homology CDS 66900 67448 . - 0 ID=cds-WP_001153547.1;Parent=gene-AD12_RS10660;Dbxref=GenBank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AD12_RS10660;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 67464 68210 . - . ID=gene-AD12_RS10655;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AD12_RS10655;old_locus_tag=AD12_2535 NZ_JJLK01000068.1 Protein Homology CDS 67464 68210 . - 0 ID=cds-WP_000927058.1;Parent=gene-AD12_RS10655;Dbxref=GenBank:WP_000927058.1;Name=WP_000927058.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310887.1;locus_tag=AD12_RS10655;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927058.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 68221 69438 . - . ID=gene-AD12_RS10650;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AD12_RS10650;old_locus_tag=AD12_2536 NZ_JJLK01000068.1 Protein Homology CDS 68221 69438 . - 0 ID=cds-WP_000107816.1;Parent=gene-AD12_RS10650;Dbxref=GenBank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AD12_RS10650;product=colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 69413 70630 . - . ID=gene-AD12_RS10645;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AD12_RS10645;old_locus_tag=AD12_2537 NZ_JJLK01000068.1 Protein Homology CDS 69413 70630 . - 0 ID=cds-WP_001023946.1;Parent=gene-AD12_RS10645;Dbxref=GenBank:WP_001023946.1;Name=WP_001023946.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=AD12_RS10645;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023946.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 70627 71115 . - . ID=gene-AD12_RS10640;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AD12_RS10640;old_locus_tag=AD12_2538 NZ_JJLK01000068.1 Protein Homology CDS 70627 71115 . - 0 ID=cds-WP_000888729.1;Parent=gene-AD12_RS10640;Dbxref=GenBank:WP_000888729.1;Name=WP_000888729.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AD12_RS10640;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888729.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 71118 71957 . - . ID=gene-AD12_RS10635;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AD12_RS10635;old_locus_tag=AD12_2539 NZ_JJLK01000068.1 Protein Homology CDS 71118 71957 . - 0 ID=cds-WP_000654503.1;Parent=gene-AD12_RS10635;Dbxref=GenBank:WP_000654503.1;Name=WP_000654503.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AD12_RS10635;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654503.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 72135 74297 . - . ID=gene-AD12_RS10630;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AD12_RS10630;old_locus_tag=AD12_2540 NZ_JJLK01000068.1 Protein Homology CDS 72135 74297 . - 0 ID=cds-WP_000137118.1;Parent=gene-AD12_RS10630;Dbxref=GenBank:WP_000137118.1;Name=WP_000137118.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AD12_RS10630;product=tyrosine-protein kinase Wzc;protein_id=WP_000137118.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 74300 74743 . - . ID=gene-AD12_RS10625;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AD12_RS10625;old_locus_tag=AD12_2541 NZ_JJLK01000068.1 Protein Homology CDS 74300 74743 . - 0 ID=cds-WP_000482901.1;Parent=gene-AD12_RS10625;Dbxref=GenBank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AD12_RS10625;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 74749 75888 . - . ID=gene-AD12_RS10620;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AD12_RS10620;old_locus_tag=AD12_2542 NZ_JJLK01000068.1 Protein Homology CDS 74749 75888 . - 0 ID=cds-WP_000978094.1;Parent=gene-AD12_RS10620;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AD12_RS10620;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 76197 76346 . + . ID=gene-AD12_RS29070;Name=AD12_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29070 NZ_JJLK01000068.1 GeneMarkS-2+ CDS 76197 76346 . + 0 ID=cds-WP_162829205.1;Parent=gene-AD12_RS29070;Dbxref=GenBank:WP_162829205.1;Name=WP_162829205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29070;product=hypothetical protein;protein_id=WP_162829205.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 76547 78130 . + . ID=gene-AD12_RS10615;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AD12_RS10615;old_locus_tag=AD12_2543 NZ_JJLK01000068.1 Protein Homology CDS 76547 78130 . + 0 ID=cds-WP_001296218.1;Parent=gene-AD12_RS10615;Dbxref=GenBank:WP_001296218.1;Name=WP_001296218.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=AD12_RS10615;product=TerC family protein;protein_id=WP_001296218.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 78404 80257 . - . ID=gene-AD12_RS10610;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AD12_RS10610;old_locus_tag=AD12_2544 NZ_JJLK01000068.1 Protein Homology CDS 78404 80257 . - 0 ID=cds-WP_001252331.1;Parent=gene-AD12_RS10610;Dbxref=GenBank:WP_001252331.1;Name=WP_001252331.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AD12_RS10610;product=outer membrane assembly protein AsmA;protein_id=WP_001252331.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 80279 80860 . - . ID=gene-AD12_RS10605;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AD12_RS10605;old_locus_tag=AD12_2545 NZ_JJLK01000068.1 Protein Homology CDS 80279 80860 . - 0 ID=cds-WP_001234767.1;Parent=gene-AD12_RS10605;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AD12_RS10605;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 80952 81593 . - . ID=gene-AD12_RS10600;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AD12_RS10600;old_locus_tag=AD12_2546 NZ_JJLK01000068.1 Protein Homology CDS 80952 81593 . - 0 ID=cds-WP_001295424.1;Parent=gene-AD12_RS10600;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AD12_RS10600;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 81911 85228 . + . ID=gene-AD12_RS10595;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AD12_RS10595;old_locus_tag=AD12_2547 NZ_JJLK01000068.1 Protein Homology CDS 81911 85228 . + 0 ID=cds-WP_000043800.1;Parent=gene-AD12_RS10595;Dbxref=GenBank:WP_000043800.1;Name=WP_000043800.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AD12_RS10595;product=diguanylate cyclase;protein_id=WP_000043800.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 85267 86124 . - . ID=gene-AD12_RS10590;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AD12_RS10590;old_locus_tag=AD12_2548 NZ_JJLK01000068.1 Protein Homology CDS 85267 86124 . - 0 ID=cds-WP_000288410.1;Parent=gene-AD12_RS10590;Dbxref=GenBank:WP_000288410.1;Name=WP_000288410.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288352.1;locus_tag=AD12_RS10590;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288410.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 86258 87610 . + . ID=gene-AD12_RS10585;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AD12_RS10585;old_locus_tag=AD12_2549 NZ_JJLK01000068.1 Protein Homology CDS 86258 87610 . + 0 ID=cds-WP_000469734.1;Parent=gene-AD12_RS10585;Dbxref=GenBank:WP_000469734.1;Name=WP_000469734.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AD12_RS10585;product=molecular chaperone;protein_id=WP_000469734.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 87622 89568 . - . ID=gene-AD12_RS10580;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AD12_RS10580;old_locus_tag=AD12_2550 NZ_JJLK01000068.1 Protein Homology CDS 87622 89568 . - 0 ID=cds-WP_000856109.1;Parent=gene-AD12_RS10580;Dbxref=GenBank:WP_000856109.1;Name=WP_000856109.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416574.1;locus_tag=AD12_RS10580;product=protein kinase YegI;protein_id=WP_000856109.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 89766 90227 . + . ID=gene-AD12_RS0124255;Name=yegJ;gbkey=Gene;gene=yegJ;gene_biotype=protein_coding;locus_tag=AD12_RS0124255 NZ_JJLK01000068.1 Protein Homology CDS 89766 90227 . + 0 ID=cds-WP_000722352.1;Parent=gene-AD12_RS0124255;Dbxref=GenBank:WP_000722352.1;Name=WP_000722352.1;gbkey=CDS;gene=yegJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416575.1;locus_tag=AD12_RS0124255;product=YegJ family protein;protein_id=WP_000722352.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 90292 91053 . - . ID=gene-AD12_RS10575;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AD12_RS10575;old_locus_tag=AD12_2553 NZ_JJLK01000068.1 Protein Homology CDS 90292 91053 . - 0 ID=cds-WP_000119066.1;Parent=gene-AD12_RS10575;Dbxref=GenBank:WP_000119066.1;Name=WP_000119066.1;gbkey=CDS;gene=pphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416576.1;locus_tag=AD12_RS10575;product=protein-serine/threonine phosphatase PphC;protein_id=WP_000119066.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 91050 91709 . - . ID=gene-AD12_RS10570;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AD12_RS10570;old_locus_tag=AD12_2554 NZ_JJLK01000068.1 Protein Homology CDS 91050 91709 . - 0 ID=cds-WP_000003186.1;Parent=gene-AD12_RS10570;Dbxref=GenBank:WP_000003186.1;Name=WP_000003186.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310908.1;locus_tag=AD12_RS10570;product=vWA domain-containing protein;protein_id=WP_000003186.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 91930 91989 . - . ID=gene-AD12_RS28090;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AD12_RS28090 NZ_JJLK01000068.1 Protein Homology CDS 91930 91989 . - 0 ID=cds-WP_010723109.1;Parent=gene-AD12_RS28090;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AD12_RS28090;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 92262 92318 . - . ID=gene-AD12_RS28755;Name=AD12_RS28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28755 NZ_JJLK01000068.1 Protein Homology CDS 92262 92318 . - 0 ID=cds-WP_001386901.1;Parent=gene-AD12_RS28755;Dbxref=GenBank:WP_001386901.1;Name=WP_001386901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AD12_RS28755;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386901.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 92590 92646 . - . ID=gene-AD12_RS28760;Name=AD12_RS28760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28760 NZ_JJLK01000068.1 Protein Homology CDS 92590 92646 . - 0 ID=cds-WP_001386901.1-2;Parent=gene-AD12_RS28760;Dbxref=GenBank:WP_001386901.1;Name=WP_001386901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AD12_RS28760;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386901.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 92925 94172 . + . ID=gene-AD12_RS10565;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AD12_RS10565;old_locus_tag=AD12_2555 NZ_JJLK01000068.1 Protein Homology CDS 92925 94172 . + 0 ID=cds-WP_000678962.1;Parent=gene-AD12_RS10565;Dbxref=GenBank:WP_000678962.1;Name=WP_000678962.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AD12_RS10565;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678962.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 94172 97294 . + . ID=gene-AD12_RS10560;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AD12_RS10560;old_locus_tag=AD12_2556 NZ_JJLK01000068.1 Protein Homology CDS 94172 97294 . + 0 ID=cds-WP_001197875.1;Parent=gene-AD12_RS10560;Dbxref=GenBank:WP_001197875.1;Name=WP_001197875.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AD12_RS10560;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197875.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 97295 100372 . + . ID=gene-AD12_RS10555;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AD12_RS10555;old_locus_tag=AD12_2557 NZ_JJLK01000068.1 Protein Homology CDS 97295 100372 . + 0 ID=cds-WP_000667554.1;Parent=gene-AD12_RS10555;Dbxref=GenBank:WP_000667554.1;Name=WP_000667554.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AD12_RS10555;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_000667554.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 100373 101788 . + . ID=gene-AD12_RS10550;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD12_RS10550;old_locus_tag=AD12_2558 NZ_JJLK01000068.1 Protein Homology CDS 100373 101788 . + 0 ID=cds-WP_032286554.1;Parent=gene-AD12_RS10550;Dbxref=GenBank:WP_032286554.1;Name=WP_032286554.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310912.1;locus_tag=AD12_RS10550;product=MFS transporter;protein_id=WP_032286554.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 101785 103188 . + . ID=gene-AD12_RS10545;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AD12_RS10545;old_locus_tag=AD12_2559 NZ_JJLK01000068.1 Protein Homology CDS 101785 103188 . + 0 ID=cds-WP_000675146.1;Parent=gene-AD12_RS10545;Dbxref=GenBank:WP_000675146.1;Name=WP_000675146.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310913.1;locus_tag=AD12_RS10545;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675146.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 103185 103907 . + . ID=gene-AD12_RS10540;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AD12_RS10540;old_locus_tag=AD12_2560 NZ_JJLK01000068.1 Protein Homology CDS 103185 103907 . + 0 ID=cds-WP_000137873.1;Parent=gene-AD12_RS10540;Dbxref=GenBank:WP_000137873.1;Name=WP_000137873.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AD12_RS10540;product=two-component system response regulator BaeR;protein_id=WP_000137873.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 104098 104430 . + . ID=gene-AD12_RS10535;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AD12_RS10535;old_locus_tag=AD12_2562 NZ_JJLK01000068.1 Protein Homology CDS 104098 104430 . + 0 ID=cds-WP_000929408.1;Parent=gene-AD12_RS10535;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AD12_RS10535;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 104639 104935 . + . ID=gene-AD12_RS10530;Name=AD12_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10530;old_locus_tag=AD12_2563 NZ_JJLK01000068.1 Protein Homology CDS 104639 104935 . + 0 ID=cds-WP_001307279.1;Parent=gene-AD12_RS10530;Dbxref=GenBank:WP_001307279.1;Name=WP_001307279.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307279.1;locus_tag=AD12_RS10530;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_001307279.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 104937 105233 . + . ID=gene-AD12_RS10525;Name=AD12_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10525;old_locus_tag=AD12_2564 NZ_JJLK01000068.1 Protein Homology CDS 104937 105233 . + 0 ID=cds-WP_001220181.1;Parent=gene-AD12_RS10525;Dbxref=GenBank:WP_001220181.1;Name=WP_001220181.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220181.1;locus_tag=AD12_RS10525;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001220181.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 105336 106697 . + . ID=gene-AD12_RS10520;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AD12_RS10520;old_locus_tag=AD12_2565 NZ_JJLK01000068.1 Protein Homology CDS 105336 106697 . + 0 ID=cds-WP_000476011.1;Parent=gene-AD12_RS10520;Dbxref=GenBank:WP_000476011.1;Name=WP_000476011.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416585.1;locus_tag=AD12_RS10520;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476011.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 106970 107188 . - . ID=gene-AD12_RS26920;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;locus_tag=AD12_RS26920;old_locus_tag=AD12_2566 NZ_JJLK01000068.1 Protein Homology CDS 106970 107188 . - 0 ID=cds-WP_000468308.1;Parent=gene-AD12_RS26920;Dbxref=GenBank:WP_000468308.1;Name=WP_000468308.1;gbkey=CDS;gene=ogrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=AD12_RS26920;product=prophage transcriptional regulator OgrK;protein_id=WP_000468308.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 107270 108433 . - . ID=gene-AD12_RS10510;Name=AD12_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10510;old_locus_tag=AD12_2567 NZ_JJLK01000068.1 Protein Homology CDS 107270 108433 . - 0 ID=cds-WP_032286555.1;Parent=gene-AD12_RS10510;Dbxref=GenBank:WP_032286555.1;Name=WP_032286555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157990.1;locus_tag=AD12_RS10510;product=phage late control D family protein;protein_id=WP_032286555.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 108433 108912 . - . ID=gene-AD12_RS10505;Name=AD12_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10505;old_locus_tag=AD12_2568 NZ_JJLK01000068.1 Protein Homology CDS 108433 108912 . - 0 ID=cds-WP_000978896.1;Parent=gene-AD12_RS10505;Dbxref=GenBank:WP_000978896.1;Name=WP_000978896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978924.1;locus_tag=AD12_RS10505;product=phage tail protein;protein_id=WP_000978896.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 108927 111374 . - . ID=gene-AD12_RS10500;Name=AD12_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10500;old_locus_tag=AD12_2569 NZ_JJLK01000068.1 Protein Homology CDS 108927 111374 . - 0 ID=cds-WP_032286558.1;Parent=gene-AD12_RS10500;Dbxref=GenBank:WP_032286558.1;Name=WP_032286558.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228341.1;locus_tag=AD12_RS10500;product=phage tail tape measure protein;protein_id=WP_032286558.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 111367 111522 . - . ID=gene-AD12_RS10495;Name=AD12_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10495;old_locus_tag=AD12_2570 NZ_JJLK01000068.1 Protein Homology CDS 111367 111522 . - 0 ID=cds-WP_000143830.1;Parent=gene-AD12_RS10495;Dbxref=GenBank:WP_000143830.1;Name=WP_000143830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143828.1;locus_tag=AD12_RS10495;product=GpE family phage tail protein;protein_id=WP_000143830.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 111519 111794 . - . ID=gene-AD12_RS10490;Name=AD12_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10490;old_locus_tag=AD12_2571 NZ_JJLK01000068.1 Protein Homology CDS 111519 111794 . - 0 ID=cds-WP_001031303.1;Parent=gene-AD12_RS10490;Dbxref=GenBank:WP_001031303.1;Name=WP_001031303.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719230.1;locus_tag=AD12_RS10490;product=phage tail assembly protein;protein_id=WP_001031303.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 111851 112369 . - . ID=gene-AD12_RS10485;Name=AD12_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10485;old_locus_tag=AD12_2572 NZ_JJLK01000068.1 Protein Homology CDS 111851 112369 . - 0 ID=cds-WP_001251408.1;Parent=gene-AD12_RS10485;Dbxref=GenBank:WP_001251408.1;Name=WP_001251408.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554312.1;locus_tag=AD12_RS10485;product=phage major tail tube protein;protein_id=WP_001251408.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 112382 113572 . - . ID=gene-AD12_RS10480;Name=AD12_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10480;old_locus_tag=AD12_2573 NZ_JJLK01000068.1 Protein Homology CDS 112382 113572 . - 0 ID=cds-WP_001752380.1;Parent=gene-AD12_RS10480;Dbxref=GenBank:WP_001752380.1;Name=WP_001752380.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483446.1;locus_tag=AD12_RS10480;product=phage tail sheath protein;protein_id=WP_001752380.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 113824 114660 . - . ID=gene-AD12_RS10475;Name=AD12_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10475;old_locus_tag=AD12_2575 NZ_JJLK01000068.1 Protein Homology CDS 113824 114660 . - 0 ID=cds-WP_032286561.1;Parent=gene-AD12_RS10475;Dbxref=GenBank:WP_032286561.1;Name=WP_032286561.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF016362.6;locus_tag=AD12_RS10475;product=restriction endonuclease;protein_id=WP_032286561.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 114955 115533 . - . ID=gene-AD12_RS29185;Name=AD12_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29185;old_locus_tag=AD12_2576 NZ_JJLK01000068.1 GeneMarkS-2+ CDS 114955 115533 . - 0 ID=cds-WP_139566663.1;Parent=gene-AD12_RS29185;Dbxref=GenBank:WP_139566663.1;Name=WP_139566663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29185;product=hypothetical protein;protein_id=WP_139566663.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 115530 115907 . - . ID=gene-AD12_RS29190;Name=AD12_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29190;old_locus_tag=AD12_2577 NZ_JJLK01000068.1 GeneMarkS-2+ CDS 115530 115907 . - 0 ID=cds-WP_097403867.1;Parent=gene-AD12_RS29190;Dbxref=GenBank:WP_097403867.1;Name=WP_097403867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29190;product=hypothetical protein;protein_id=WP_097403867.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 116076 116603 . - . ID=gene-AD12_RS10470;Name=AD12_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10470;old_locus_tag=AD12_2578 NZ_JJLK01000068.1 Protein Homology CDS 116076 116603 . - 0 ID=cds-WP_001164152.1;Parent=gene-AD12_RS10470;Dbxref=GenBank:WP_001164152.1;Name=WP_001164152.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001762409.1;locus_tag=AD12_RS10470;product=tail fiber assembly protein;protein_id=WP_001164152.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 116607 118652 . - . ID=gene-AD12_RS10465;Name=AD12_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10465;old_locus_tag=AD12_2579 NZ_JJLK01000068.1 Protein Homology CDS 116607 118652 . - 0 ID=cds-WP_032286563.1;Parent=gene-AD12_RS10465;Dbxref=GenBank:WP_032286563.1;Name=WP_032286563.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297781.1;locus_tag=AD12_RS10465;product=phage tail protein;protein_id=WP_032286563.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 118663 119193 . - . ID=gene-AD12_RS10460;Name=AD12_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10460;old_locus_tag=AD12_2580 NZ_JJLK01000068.1 Protein Homology CDS 118663 119193 . - 0 ID=cds-WP_001285314.1;Parent=gene-AD12_RS10460;Dbxref=GenBank:WP_001285314.1;Name=WP_001285314.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285325.1;locus_tag=AD12_RS10460;product=phage tail protein I;protein_id=WP_001285314.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 119186 120094 . - . ID=gene-AD12_RS10455;Name=AD12_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10455;old_locus_tag=AD12_2581 NZ_JJLK01000068.1 Protein Homology CDS 119186 120094 . - 0 ID=cds-WP_001121474.1;Parent=gene-AD12_RS10455;Dbxref=GenBank:WP_001121474.1;Name=WP_001121474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121472.1;locus_tag=AD12_RS10455;product=baseplate assembly protein;protein_id=WP_001121474.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 120099 120446 . - . ID=gene-AD12_RS10450;Name=AD12_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10450;old_locus_tag=AD12_2582 NZ_JJLK01000068.1 Protein Homology CDS 120099 120446 . - 0 ID=cds-WP_000127163.1;Parent=gene-AD12_RS10450;Dbxref=GenBank:WP_000127163.1;Name=WP_000127163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228331.1;locus_tag=AD12_RS10450;product=GPW/gp25 family protein;protein_id=WP_000127163.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 120443 121078 . - . ID=gene-AD12_RS10445;Name=AD12_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10445;old_locus_tag=AD12_2583 NZ_JJLK01000068.1 Protein Homology CDS 120443 121078 . - 0 ID=cds-WP_032286565.1;Parent=gene-AD12_RS10445;Dbxref=GenBank:WP_032286565.1;Name=WP_032286565.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093708.1;locus_tag=AD12_RS10445;product=phage baseplate assembly protein V;protein_id=WP_032286565.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 121145 121597 . - . ID=gene-AD12_RS10440;Name=AD12_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10440;old_locus_tag=AD12_2584 NZ_JJLK01000068.1 Protein Homology CDS 121145 121597 . - 0 ID=cds-WP_001001786.1;Parent=gene-AD12_RS10440;Dbxref=GenBank:WP_001001786.1;Name=WP_001001786.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001795.1;locus_tag=AD12_RS10440;product=phage virion morphogenesis protein;protein_id=WP_001001786.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 121590 122057 . - . ID=gene-AD12_RS10435;Name=AD12_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10435;old_locus_tag=AD12_2585 NZ_JJLK01000068.1 Protein Homology CDS 121590 122057 . - 0 ID=cds-WP_032286567.1;Parent=gene-AD12_RS10435;Dbxref=GenBank:WP_032286567.1;Name=WP_032286567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406878.1;locus_tag=AD12_RS10435;product=phage tail protein;protein_id=WP_032286567.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 122020 122283 . - . ID=gene-AD12_RS29290;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD12_RS29290 NZ_JJLK01000068.1 Protein Homology CDS 122020 122283 . - 0 ID=cds-WP_223951575.1;Parent=gene-AD12_RS29290;Dbxref=GenBank:WP_223951575.1;Name=WP_223951575.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640305.1;locus_tag=AD12_RS29290;product=Rz1-like lysis system protein LysC;protein_id=WP_223951575.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 122165 122590 . - . ID=gene-AD12_RS29535;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=AD12_RS29535;old_locus_tag=AD12_2587 NZ_JJLK01000068.1 Protein Homology CDS 122165 122590 . - 0 ID=cds-WP_032286568.1;Parent=gene-AD12_RS29535;Dbxref=GenBank:WP_032286568.1;Name=WP_032286568.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585210.1;locus_tag=AD12_RS29535;product=Rz-like lysis system protein LysB;protein_id=WP_032286568.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 122578 123003 . - . ID=gene-AD12_RS10420;Name=AD12_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10420;old_locus_tag=AD12_2588 NZ_JJLK01000068.1 Protein Homology CDS 122578 123003 . - 0 ID=cds-WP_032286569.1;Parent=gene-AD12_RS10420;Dbxref=GenBank:WP_032286569.1;Name=WP_032286569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736575.1;locus_tag=AD12_RS10420;product=DNZ54_00345 family protein;protein_id=WP_032286569.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 123018 123515 . - . ID=gene-AD12_RS10415;Name=AD12_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10415;old_locus_tag=AD12_2589 NZ_JJLK01000068.1 Protein Homology CDS 123018 123515 . - 0 ID=cds-WP_001144101.1;Parent=gene-AD12_RS10415;Dbxref=GenBank:WP_001144101.1;Name=WP_001144101.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235441.1;locus_tag=AD12_RS10415;product=glycoside hydrolase family 24 protein;protein_id=WP_001144101.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 123515 123796 . - . ID=gene-AD12_RS10410;Name=AD12_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10410;old_locus_tag=AD12_2590 NZ_JJLK01000068.1 Protein Homology CDS 123515 123796 . - 0 ID=cds-WP_000123124.1;Parent=gene-AD12_RS10410;Dbxref=GenBank:WP_000123124.1;Name=WP_000123124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123124.1;locus_tag=AD12_RS10410;product=phage holin family protein;protein_id=WP_000123124.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 123800 124003 . - . ID=gene-AD12_RS10405;Name=AD12_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10405;old_locus_tag=AD12_2591 NZ_JJLK01000068.1 Protein Homology CDS 123800 124003 . - 0 ID=cds-WP_001773438.1;Parent=gene-AD12_RS10405;Dbxref=GenBank:WP_001773438.1;Name=WP_001773438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228323.1;locus_tag=AD12_RS10405;product=tail protein X;protein_id=WP_001773438.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 124003 124512 . - . ID=gene-AD12_RS10400;Name=AD12_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10400;old_locus_tag=AD12_2592 NZ_JJLK01000068.1 Protein Homology CDS 124003 124512 . - 0 ID=cds-WP_000988642.1;Parent=gene-AD12_RS10400;Dbxref=GenBank:WP_000988642.1;Name=WP_000988642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228322.1;locus_tag=AD12_RS10400;product=head completion/stabilization protein;protein_id=WP_000988642.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 124612 125355 . - . ID=gene-AD12_RS10395;Name=AD12_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10395;old_locus_tag=AD12_2593 NZ_JJLK01000068.1 Protein Homology CDS 124612 125355 . - 0 ID=cds-WP_000203418.1;Parent=gene-AD12_RS10395;Dbxref=GenBank:WP_000203418.1;Name=WP_000203418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540320.1;locus_tag=AD12_RS10395;product=terminase endonuclease subunit;protein_id=WP_000203418.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 125359 126432 . - . ID=gene-AD12_RS10390;Name=AD12_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10390;old_locus_tag=AD12_2594 NZ_JJLK01000068.1 Protein Homology CDS 125359 126432 . - 0 ID=cds-WP_001248590.1;Parent=gene-AD12_RS10390;Dbxref=GenBank:WP_001248590.1;Name=WP_001248590.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248534.1;locus_tag=AD12_RS10390;product=phage major capsid protein%2C P2 family;protein_id=WP_001248590.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 126491 127345 . - . ID=gene-AD12_RS10385;Name=AD12_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10385;old_locus_tag=AD12_2595 NZ_JJLK01000068.1 Protein Homology CDS 126491 127345 . - 0 ID=cds-WP_001085952.1;Parent=gene-AD12_RS10385;Dbxref=GenBank:WP_001085952.1;Name=WP_001085952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074418.1;locus_tag=AD12_RS10385;product=GPO family capsid scaffolding protein;protein_id=WP_001085952.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 127519 129291 . + . ID=gene-AD12_RS10380;Name=AD12_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10380;old_locus_tag=AD12_2596 NZ_JJLK01000068.1 Protein Homology CDS 127519 129291 . + 0 ID=cds-WP_029488803.1;Parent=gene-AD12_RS10380;Dbxref=GenBank:WP_029488803.1;Name=WP_029488803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357052.1;locus_tag=AD12_RS10380;product=terminase ATPase subunit family protein;protein_id=WP_029488803.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 129291 130325 . + . ID=gene-AD12_RS10375;Name=AD12_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10375;old_locus_tag=AD12_2597 NZ_JJLK01000068.1 Protein Homology CDS 129291 130325 . + 0 ID=cds-WP_000038161.1;Parent=gene-AD12_RS10375;Dbxref=GenBank:WP_000038161.1;Name=WP_000038161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752368.1;locus_tag=AD12_RS10375;product=phage portal protein;protein_id=WP_000038161.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 130726 133656 . + . ID=gene-AD12_RS10370;Name=AD12_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10370;old_locus_tag=AD12_2599 NZ_JJLK01000068.1 Protein Homology CDS 130726 133656 . + 0 ID=cds-WP_032286573.1;Parent=gene-AD12_RS10370;Dbxref=GenBank:WP_032286573.1;Name=WP_032286573.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755156.1;locus_tag=AD12_RS10370;product=AAA family ATPase;protein_id=WP_032286573.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 134061 136328 . - . ID=gene-AD12_RS10365;Name=AD12_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10365;old_locus_tag=AD12_2601 NZ_JJLK01000068.1 Protein Homology CDS 134061 136328 . - 0 ID=cds-WP_032286575.1;Parent=gene-AD12_RS10365;Dbxref=GenBank:WP_032286575.1;Name=WP_032286575.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003571056.1;locus_tag=AD12_RS10365;product=replication endonuclease;protein_id=WP_032286575.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 136318 136593 . - . ID=gene-AD12_RS10360;Name=AD12_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10360;old_locus_tag=AD12_2602 NZ_JJLK01000068.1 Protein Homology CDS 136318 136593 . - 0 ID=cds-WP_000027664.1;Parent=gene-AD12_RS10360;Dbxref=GenBank:WP_000027664.1;Name=WP_000027664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=AD12_RS10360;product=DUF5405 family protein;protein_id=WP_000027664.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 136590 136814 . - . ID=gene-AD12_RS10355;Name=AD12_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10355;old_locus_tag=AD12_2603 NZ_JJLK01000068.1 Protein Homology CDS 136590 136814 . - 0 ID=cds-WP_001113263.1;Parent=gene-AD12_RS10355;Dbxref=GenBank:WP_001113263.1;Name=WP_001113263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=AD12_RS10355;product=TraR/DksA family transcriptional regulator;protein_id=WP_001113263.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 136814 137116 . - . ID=gene-AD12_RS10350;Name=AD12_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10350;old_locus_tag=AD12_2604 NZ_JJLK01000068.1 Protein Homology CDS 136814 137116 . - 0 ID=cds-WP_001754915.1;Parent=gene-AD12_RS10350;Dbxref=GenBank:WP_001754915.1;Name=WP_001754915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277953.1;locus_tag=AD12_RS10350;product=DUF5405 family protein;protein_id=WP_001754915.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 137116 137340 . - . ID=gene-AD12_RS10345;Name=AD12_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10345;old_locus_tag=AD12_2605 NZ_JJLK01000068.1 Protein Homology CDS 137116 137340 . - 0 ID=cds-WP_021525846.1;Parent=gene-AD12_RS10345;Dbxref=GenBank:WP_021525846.1;Name=WP_021525846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1;locus_tag=AD12_RS10345;product=DUF2732 family protein;protein_id=WP_021525846.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 137404 137904 . - . ID=gene-AD12_RS10340;Name=AD12_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10340;old_locus_tag=AD12_2606 NZ_JJLK01000068.1 Protein Homology CDS 137404 137904 . - 0 ID=cds-WP_032286576.1;Parent=gene-AD12_RS10340;Dbxref=GenBank:WP_032286576.1;Name=WP_032286576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1;locus_tag=AD12_RS10340;product=hypothetical protein;protein_id=WP_032286576.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 137901 138071 . - . ID=gene-AD12_RS29075;Name=AD12_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29075;old_locus_tag=AD12_2607 NZ_JJLK01000068.1 Protein Homology CDS 137901 138071 . - 0 ID=cds-WP_001005162.1;Parent=gene-AD12_RS29075;Dbxref=GenBank:WP_001005162.1;Name=WP_001005162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530545.1;locus_tag=AD12_RS29075;product=hypothetical protein;protein_id=WP_001005162.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 138082 138357 . - . ID=gene-AD12_RS0124265;Name=AD12_RS0124265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124265;old_locus_tag=AD12_2608 NZ_JJLK01000068.1 Protein Homology CDS 138082 138357 . - 0 ID=cds-WP_000043869.1;Parent=gene-AD12_RS0124265;Dbxref=GenBank:WP_000043869.1;Name=WP_000043869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043869.1;locus_tag=AD12_RS0124265;product=regulatory phage cox family protein;protein_id=WP_000043869.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 138472 138771 . + . ID=gene-AD12_RS0124270;Name=AD12_RS0124270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124270 NZ_JJLK01000068.1 Protein Homology CDS 138472 138771 . + 0 ID=cds-WP_001306384.1;Parent=gene-AD12_RS0124270;Dbxref=GenBank:WP_001306384.1;Name=WP_001306384.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020919.1;locus_tag=AD12_RS0124270;product=helix-turn-helix domain-containing protein;protein_id=WP_001306384.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 138887 139900 . + . ID=gene-AD12_RS10335;Name=AD12_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10335;old_locus_tag=AD12_2609 NZ_JJLK01000068.1 Protein Homology CDS 138887 139900 . + 0 ID=cds-WP_032286578.1;Parent=gene-AD12_RS10335;Dbxref=GenBank:WP_032286578.1;Name=WP_032286578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755162.1;locus_tag=AD12_RS10335;product=site-specific integrase;protein_id=WP_032286578.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 140166 140483 . - . ID=gene-AD12_RS0124280;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AD12_RS0124280;old_locus_tag=AD12_2610 NZ_JJLK01000068.1 Protein Homology CDS 140166 140483 . - 0 ID=cds-WP_000716757.1;Parent=gene-AD12_RS0124280;Dbxref=GenBank:WP_000716757.1;Name=WP_000716757.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=AD12_RS0124280;product=protein YegR;protein_id=WP_000716757.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 140889 141788 . + . ID=gene-AD12_RS10330;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AD12_RS10330;old_locus_tag=AD12_2611 NZ_JJLK01000068.1 Protein Homology CDS 140889 141788 . + 0 ID=cds-WP_000807362.1;Parent=gene-AD12_RS10330;Dbxref=GenBank:WP_000807362.1;Name=WP_000807362.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=AD12_RS10330;product=lipid kinase YegS;protein_id=WP_000807362.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 141870 142643 . - . ID=gene-AD12_RS10325;Name=AD12_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10325;old_locus_tag=AD12_2612 NZ_JJLK01000068.1 Protein Homology CDS 141870 142643 . - 0 ID=cds-WP_001295426.1;Parent=gene-AD12_RS10325;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AD12_RS10325;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 142749 143789 . - . ID=gene-AD12_RS10320;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AD12_RS10320;old_locus_tag=AD12_2613 NZ_JJLK01000068.1 Protein Homology CDS 142749 143789 . - 0 ID=cds-WP_000844208.1;Parent=gene-AD12_RS10320;Dbxref=GenBank:WP_000844208.1;Name=WP_000844208.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AD12_RS10320;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844208.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 143837 145192 . - . ID=gene-AD12_RS10315;Name=AD12_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10315;old_locus_tag=AD12_2614 NZ_JJLK01000068.1 Protein Homology CDS 143837 145192 . - 0 ID=cds-WP_000490679.1;Parent=gene-AD12_RS10315;Dbxref=GenBank:WP_000490679.1;Name=WP_000490679.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AD12_RS10315;product=PTS galactitol transporter subunit IIC;protein_id=WP_000490679.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 145196 145480 . - . ID=gene-AD12_RS10310;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AD12_RS10310;old_locus_tag=AD12_2615 NZ_JJLK01000068.1 Protein Homology CDS 145196 145480 . - 0 ID=cds-WP_000823272.1;Parent=gene-AD12_RS10310;Dbxref=GenBank:WP_000823272.1;Name=WP_000823272.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AD12_RS10310;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823272.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 145511 145963 . - . ID=gene-AD12_RS10305;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AD12_RS10305;old_locus_tag=AD12_2616 NZ_JJLK01000068.1 Protein Homology CDS 145511 145963 . - 0 ID=cds-WP_000182914.1;Parent=gene-AD12_RS10305;Dbxref=GenBank:WP_000182914.1;Name=WP_000182914.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=AD12_RS10305;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182914.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 145973 147235 . - . ID=gene-AD12_RS10300;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AD12_RS10300;old_locus_tag=AD12_2617 NZ_JJLK01000068.1 Protein Homology CDS 145973 147235 . - 0 ID=cds-WP_000853886.1;Parent=gene-AD12_RS10300;Dbxref=GenBank:WP_000853886.1;Name=WP_000853886.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=AD12_RS10300;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000853886.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 147264 148118 . - . ID=gene-AD12_RS10295;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AD12_RS10295;old_locus_tag=AD12_2618 NZ_JJLK01000068.1 Protein Homology CDS 147264 148118 . - 0 ID=cds-WP_000289788.1;Parent=gene-AD12_RS10295;Dbxref=GenBank:WP_000289788.1;Name=WP_000289788.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AD12_RS10295;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_000289788.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 148428 149480 . - . ID=gene-AD12_RS10290;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AD12_RS10290;old_locus_tag=AD12_2619 NZ_JJLK01000068.1 Protein Homology CDS 148428 149480 . - 0 ID=cds-WP_000129551.1;Parent=gene-AD12_RS10290;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AD12_RS10290;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 149737 151014 . + . ID=gene-AD12_RS10285;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AD12_RS10285;old_locus_tag=AD12_2620 NZ_JJLK01000068.1 Protein Homology CDS 149737 151014 . + 0 ID=cds-WP_000858498.1;Parent=gene-AD12_RS10285;Dbxref=GenBank:WP_000858498.1;Name=WP_000858498.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;gene=yegT;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AD12_RS10285;product=nucleoside permease;protein_id=WP_000858498.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 151011 152015 . + . ID=gene-AD12_RS10280;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AD12_RS10280;old_locus_tag=AD12_2621 NZ_JJLK01000068.1 Protein Homology CDS 151011 152015 . + 0 ID=cds-WP_000846217.1;Parent=gene-AD12_RS10280;Dbxref=GenBank:WP_000846217.1;Name=WP_000846217.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AD12_RS10280;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846217.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 152012 152977 . + . ID=gene-AD12_RS10275;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AD12_RS10275;old_locus_tag=AD12_2622 NZ_JJLK01000068.1 Protein Homology CDS 152012 152977 . + 0 ID=cds-WP_000011957.1;Parent=gene-AD12_RS10275;Dbxref=GenBank:WP_000011957.1;Name=WP_000011957.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AD12_RS10275;product=carbohydrate kinase family protein;protein_id=WP_000011957.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 152951 153697 . - . ID=gene-AD12_RS10270;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AD12_RS10270;old_locus_tag=AD12_2623 NZ_JJLK01000068.1 Protein Homology CDS 152951 153697 . - 0 ID=cds-WP_000434038.1;Parent=gene-AD12_RS10270;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AD12_RS10270;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 153749 154571 . - . ID=gene-AD12_RS28770;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=pseudogene;locus_tag=AD12_RS28770;old_locus_tag=AD12_2624;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 153749 154571 . - 0 ID=cds-AD12_RS28770;Parent=gene-AD12_RS28770;Note=frameshifted;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AD12_RS28770;product=glycoside hydrolase family 25 protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 154636 155436 . - . ID=gene-AD12_RS10260;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AD12_RS10260;old_locus_tag=AD12_2626 NZ_JJLK01000068.1 Protein Homology CDS 154636 155436 . - 0 ID=cds-WP_000822274.1;Parent=gene-AD12_RS10260;Dbxref=GenBank:WP_000822274.1;Name=WP_000822274.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AD12_RS10260;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 155433 156221 . - . ID=gene-AD12_RS10255;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AD12_RS10255;old_locus_tag=AD12_2627 NZ_JJLK01000068.1 Protein Homology CDS 155433 156221 . - 0 ID=cds-WP_001195605.1;Parent=gene-AD12_RS10255;Dbxref=GenBank:WP_001195605.1;Name=WP_001195605.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707990.1;locus_tag=AD12_RS10255;product=hydroxyethylthiazole kinase;protein_id=WP_001195605.1;transl_table=11 NZ_JJLK01000068.1 cmsearch riboswitch 156256 156352 . - . ID=id-NZ_JJLK01000068.1:156256..156352;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000068.1 RefSeq gene 156444 156716 . - . ID=gene-AD12_RS10250;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AD12_RS10250;old_locus_tag=AD12_2628 NZ_JJLK01000068.1 Protein Homology CDS 156444 156716 . - 0 ID=cds-WP_032286581.1;Parent=gene-AD12_RS10250;Dbxref=GenBank:WP_032286581.1;Name=WP_032286581.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AD12_RS10250;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_032286581.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 156837 157649 . + . ID=gene-AD12_RS10245;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AD12_RS10245;old_locus_tag=AD12_2629 NZ_JJLK01000068.1 Protein Homology CDS 156837 157649 . + 0 ID=cds-WP_032286582.1;Parent=gene-AD12_RS10245;Dbxref=GenBank:WP_032286582.1;Name=WP_032286582.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AD12_RS10245;product=nickel/cobalt efflux protein RcnA;protein_id=WP_032286582.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 157868 158206 . + . ID=gene-AD12_RS10240;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AD12_RS10240;old_locus_tag=AD12_2630 NZ_JJLK01000068.1 Protein Homology CDS 157868 158206 . + 0 ID=cds-WP_000153074.1;Parent=gene-AD12_RS10240;Dbxref=GenBank:WP_000153074.1;Name=WP_000153074.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707992.1;locus_tag=AD12_RS10240;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153074.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 158288 159322 . - . ID=gene-AD12_RS10235;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AD12_RS10235;old_locus_tag=AD12_2631 NZ_JJLK01000068.1 Protein Homology CDS 158288 159322 . - 0 ID=cds-WP_000405687.1;Parent=gene-AD12_RS10235;Dbxref=GenBank:WP_000405687.1;Name=WP_000405687.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AD12_RS10235;product=putative fimbrial-like adhesin protein;protein_id=WP_000405687.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 159338 161818 . - . ID=gene-AD12_RS10230;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AD12_RS10230;old_locus_tag=AD12_2632 NZ_JJLK01000068.1 Protein Homology CDS 159338 161818 . - 0 ID=cds-WP_000945467.1;Parent=gene-AD12_RS10230;Dbxref=GenBank:WP_000945467.1;Name=WP_000945467.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AD12_RS10230;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945467.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 161834 162508 . - . ID=gene-AD12_RS10225;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AD12_RS10225;old_locus_tag=AD12_2633 NZ_JJLK01000068.1 Protein Homology CDS 161834 162508 . - 0 ID=cds-WP_000677395.1;Parent=gene-AD12_RS10225;Dbxref=GenBank:WP_000677395.1;Name=WP_000677395.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AD12_RS10225;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677395.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 162588 163130 . - . ID=gene-AD12_RS10220;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AD12_RS10220;old_locus_tag=AD12_2634 NZ_JJLK01000068.1 Protein Homology CDS 162588 163130 . - 0 ID=cds-WP_000830468.1;Parent=gene-AD12_RS10220;Dbxref=GenBank:WP_000830468.1;Name=WP_000830468.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=AD12_RS10220;product=fimbrial protein;protein_id=WP_000830468.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 163423 163704 . - . ID=gene-AD12_RS0124290;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AD12_RS0124290 NZ_JJLK01000068.1 Protein Homology CDS 163423 163704 . - 0 ID=cds-WP_001307891.1;Parent=gene-AD12_RS0124290;Dbxref=GenBank:WP_001307891.1;Name=WP_001307891.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439264.1;locus_tag=AD12_RS0124290;product=YehE family protein;protein_id=WP_001307891.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 163967 165076 . - . ID=gene-AD12_RS10215;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AD12_RS10215;old_locus_tag=AD12_2635 NZ_JJLK01000068.1 Protein Homology CDS 163967 165076 . - 0 ID=cds-WP_001005448.1;Parent=gene-AD12_RS10215;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AD12_RS10215;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 165208 167241 . + . ID=gene-AD12_RS10210;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AD12_RS10210;old_locus_tag=AD12_2636 NZ_JJLK01000068.1 Protein Homology CDS 165208 167241 . + 0 ID=cds-WP_001295427.1;Parent=gene-AD12_RS10210;Dbxref=GenBank:WP_001295427.1;Name=WP_001295427.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AD12_RS10210;product=methionine--tRNA ligase;protein_id=WP_001295427.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 167382 171176 . + . ID=gene-AD12_RS10205;Name=AD12_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS10205;old_locus_tag=AD12_2637 NZ_JJLK01000068.1 Protein Homology CDS 167382 171176 . + 0 ID=cds-WP_001215577.1;Parent=gene-AD12_RS10205;Dbxref=GenBank:WP_001215577.1;Name=WP_001215577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AD12_RS10205;product=DUF4132 domain-containing protein;protein_id=WP_001215577.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 171186 174818 . + . ID=gene-AD12_RS0124295;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=pseudogene;locus_tag=AD12_RS0124295;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 171186 174818 . + 0 ID=cds-AD12_RS0124295;Parent=gene-AD12_RS0124295;Note=internal stop;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AD12_RS0124295;product=DUF4132 domain-containing protein YehI;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 174879 175196 . + . ID=gene-AD12_RS0124300;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AD12_RS0124300 NZ_JJLK01000068.1 Protein Homology CDS 174879 175196 . + 0 ID=cds-WP_000636925.1;Parent=gene-AD12_RS0124300;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AD12_RS0124300;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 175503 176591 . + . ID=gene-AD12_RS10200;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AD12_RS10200;old_locus_tag=AD12_2640 NZ_JJLK01000068.1 Protein Homology CDS 175503 176591 . + 0 ID=cds-WP_001462587.1;Parent=gene-AD12_RS10200;Dbxref=GenBank:WP_001462587.1;Name=WP_001462587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310954.2;locus_tag=AD12_RS10200;product=ATP-binding protein;protein_id=WP_001462587.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 176602 178880 . + . ID=gene-AD12_RS28095;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=pseudogene;locus_tag=AD12_RS28095;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 176602 178880 . + 0 ID=cds-AD12_RS28095;Parent=gene-AD12_RS28095;Note=frameshifted;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AD12_RS28095;product=DUF5682 family protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 178873 180009 . + . ID=gene-AD12_RS10190;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AD12_RS10190;old_locus_tag=AD12_2643 NZ_JJLK01000068.1 Protein Homology CDS 178873 180009 . + 0 ID=cds-WP_032286583.1;Parent=gene-AD12_RS10190;Dbxref=GenBank:WP_032286583.1;Name=WP_032286583.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AD12_RS10190;product=vWA domain-containing protein;protein_id=WP_032286583.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 180006 182006 . + . ID=gene-AD12_RS10185;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AD12_RS10185;old_locus_tag=AD12_2644 NZ_JJLK01000068.1 Protein Homology CDS 180006 182006 . + 0 ID=cds-WP_001323540.1;Parent=gene-AD12_RS10185;Dbxref=GenBank:WP_001323540.1;Name=WP_001323540.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AD12_RS10185;product=SWIM zinc finger family protein;protein_id=WP_001323540.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 182131 182592 . + . ID=gene-AD12_RS10180;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AD12_RS10180;old_locus_tag=AD12_2645 NZ_JJLK01000068.1 Protein Homology CDS 182131 182592 . + 0 ID=cds-WP_001295429.1;Parent=gene-AD12_RS10180;Dbxref=GenBank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AD12_RS10180;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 182633 183103 . - . ID=gene-AD12_RS10175;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AD12_RS10175;old_locus_tag=AD12_2646 NZ_JJLK01000068.1 Protein Homology CDS 182633 183103 . - 0 ID=cds-WP_001295430.1;Parent=gene-AD12_RS10175;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AD12_RS10175;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 183150 183869 . - . ID=gene-AD12_RS10170;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AD12_RS10170;old_locus_tag=AD12_2647 NZ_JJLK01000068.1 Protein Homology CDS 183150 183869 . - 0 ID=cds-WP_000598641.1;Parent=gene-AD12_RS10170;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AD12_RS10170;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 183866 185551 . - . ID=gene-AD12_RS10165;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AD12_RS10165;old_locus_tag=AD12_2648 NZ_JJLK01000068.1 Protein Homology CDS 183866 185551 . - 0 ID=cds-WP_001295431.1;Parent=gene-AD12_RS10165;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AD12_RS10165;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 185773 186504 . + . ID=gene-AD12_RS10160;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AD12_RS10160;old_locus_tag=AD12_2649 NZ_JJLK01000068.1 Protein Homology CDS 185773 186504 . + 0 ID=cds-WP_001240401.1;Parent=gene-AD12_RS10160;Dbxref=GenBank:WP_001240401.1;Name=WP_001240401.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AD12_RS10160;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240401.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 186564 186671 . + . ID=gene-AD12_RS0124310;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AD12_RS0124310 NZ_JJLK01000068.1 Protein Homology CDS 186564 186671 . + 0 ID=cds-WP_001216963.1;Parent=gene-AD12_RS0124310;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AD12_RS0124310;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 186652 187383 . - . ID=gene-AD12_RS10155;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AD12_RS10155;old_locus_tag=AD12_2650 NZ_JJLK01000068.1 Protein Homology CDS 186652 187383 . - 0 ID=cds-WP_000783120.1;Parent=gene-AD12_RS10155;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AD12_RS10155;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 187388 188314 . - . ID=gene-AD12_RS10150;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AD12_RS10150;old_locus_tag=AD12_2651 NZ_JJLK01000068.1 Protein Homology CDS 187388 188314 . - 0 ID=cds-WP_000569361.1;Parent=gene-AD12_RS10150;Dbxref=GenBank:WP_000569361.1;Name=WP_000569361.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708030.1;locus_tag=AD12_RS10150;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569361.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 188307 189464 . - . ID=gene-AD12_RS10145;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AD12_RS10145;old_locus_tag=AD12_2652 NZ_JJLK01000068.1 Protein Homology CDS 188307 189464 . - 0 ID=cds-WP_000221821.1;Parent=gene-AD12_RS10145;Dbxref=GenBank:WP_000221821.1;Name=WP_000221821.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AD12_RS10145;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000221821.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 189471 190388 . - . ID=gene-AD12_RS10140;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AD12_RS10140;old_locus_tag=AD12_2653 NZ_JJLK01000068.1 Protein Homology CDS 189471 190388 . - 0 ID=cds-WP_001130306.1;Parent=gene-AD12_RS10140;Dbxref=GenBank:WP_001130306.1;Name=WP_001130306.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AD12_RS10140;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130306.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 190599 192896 . - . ID=gene-AD12_RS10135;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AD12_RS10135;old_locus_tag=AD12_2654 NZ_JJLK01000068.1 Protein Homology CDS 190599 192896 . - 0 ID=cds-WP_032286585.1;Parent=gene-AD12_RS10135;Dbxref=GenBank:WP_032286585.1;Name=WP_032286585.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AD12_RS10135;product=beta-glucosidase BglX;protein_id=WP_032286585.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 193092 194807 . + . ID=gene-AD12_RS10130;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AD12_RS10130;old_locus_tag=AD12_2655 NZ_JJLK01000068.1 Protein Homology CDS 193092 194807 . + 0 ID=cds-WP_000097369.1;Parent=gene-AD12_RS10130;Dbxref=GenBank:WP_000097369.1;Name=WP_000097369.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AD12_RS10130;product=D-lactate dehydrogenase;protein_id=WP_000097369.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 194845 195778 . - . ID=gene-AD12_RS0124315;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=pseudogene;locus_tag=AD12_RS0124315;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 194845 195778 . - 0 ID=cds-AD12_RS0124315;Parent=gene-AD12_RS0124315;Note=frameshifted;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=AD12_RS0124315;product=D-alanyl-D-alanine endopeptidase;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 195952 196539 . - . ID=gene-AD12_RS10125;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AD12_RS10125;old_locus_tag=AD12_2656 NZ_JJLK01000068.1 Protein Homology CDS 195952 196539 . - 0 ID=cds-WP_001295454.1;Parent=gene-AD12_RS10125;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AD12_RS10125;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 196709 197287 . + . ID=gene-AD12_RS10120;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AD12_RS10120;old_locus_tag=AD12_2657 NZ_JJLK01000068.1 Protein Homology CDS 196709 197287 . + 0 ID=cds-WP_001296821.1;Parent=gene-AD12_RS10120;Dbxref=GenBank:WP_001296821.1;Name=WP_001296821.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AD12_RS10120;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 197417 198178 . - . ID=gene-AD12_RS10115;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AD12_RS10115;old_locus_tag=AD12_2658 NZ_JJLK01000068.1 Protein Homology CDS 197417 198178 . - 0 ID=cds-WP_000079526.1;Parent=gene-AD12_RS10115;Dbxref=GenBank:WP_000079526.1;Name=WP_000079526.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=AD12_RS10115;product=SDR family oxidoreductase;protein_id=WP_000079526.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 198231 199667 . - . ID=gene-AD12_RS10110;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AD12_RS10110;old_locus_tag=AD12_2659 NZ_JJLK01000068.1 Protein Homology CDS 198231 199667 . - 0 ID=cds-WP_001482805.1;Parent=gene-AD12_RS10110;Dbxref=GenBank:WP_001482805.1;Name=WP_001482805.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AD12_RS10110;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001482805.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 199891 199974 . + . ID=gene-AD12_RS0124320;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AD12_RS0124320 NZ_JJLK01000068.1 Protein Homology CDS 199891 199974 . + 0 ID=cds-WP_000691708.1;Parent=gene-AD12_RS0124320;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AD12_RS0124320;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 200345 201292 . - . ID=gene-AD12_RS10105;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AD12_RS10105;old_locus_tag=AD12_2660 NZ_JJLK01000068.1 Protein Homology CDS 200345 201292 . - 0 ID=cds-WP_001264866.1;Parent=gene-AD12_RS10105;Dbxref=GenBank:WP_001264866.1;Name=WP_001264866.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AD12_RS10105;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264866.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 201531 201929 . + . ID=gene-AD12_RS10100;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AD12_RS10100;old_locus_tag=AD12_2661 NZ_JJLK01000068.1 Protein Homology CDS 201531 201929 . + 0 ID=cds-WP_001295452.1;Parent=gene-AD12_RS10100;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AD12_RS10100;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 201926 202621 . + . ID=gene-AD12_RS10095;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AD12_RS10095;old_locus_tag=AD12_2662 NZ_JJLK01000068.1 Protein Homology CDS 201926 202621 . + 0 ID=cds-WP_000968208.1;Parent=gene-AD12_RS10095;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AD12_RS10095;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 202751 203635 . + . ID=gene-AD12_RS10090;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AD12_RS10090;old_locus_tag=AD12_2663 NZ_JJLK01000068.1 Protein Homology CDS 202751 203635 . + 0 ID=cds-WP_000553564.1;Parent=gene-AD12_RS10090;Dbxref=GenBank:WP_000553564.1;Name=WP_000553564.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AD12_RS10090;product=cytidine deaminase;protein_id=WP_000553564.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 203785 204504 . + . ID=gene-AD12_RS10085;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AD12_RS10085;old_locus_tag=AD12_2664 NZ_JJLK01000068.1 Protein Homology CDS 203785 204504 . + 0 ID=cds-WP_000920064.1;Parent=gene-AD12_RS10085;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AD12_RS10085;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 204507 204746 . + . ID=gene-AD12_RS10080;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AD12_RS10080;old_locus_tag=AD12_2665 NZ_JJLK01000068.1 Protein Homology CDS 204507 204746 . + 0 ID=cds-WP_000383096.1;Parent=gene-AD12_RS10080;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AD12_RS10080;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 205065 206303 . + . ID=gene-AD12_RS10075;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AD12_RS10075;old_locus_tag=AD12_2666 NZ_JJLK01000068.1 Protein Homology CDS 205065 206303 . + 0 ID=cds-WP_001136359.1;Parent=gene-AD12_RS10075;Dbxref=GenBank:WP_001136359.1;Name=WP_001136359.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AD12_RS10075;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136359.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 206297 207532 . + . ID=gene-AD12_RS10070;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AD12_RS10070;old_locus_tag=AD12_2667 NZ_JJLK01000068.1 Protein Homology CDS 206297 207532 . + 0 ID=cds-WP_000956043.1;Parent=gene-AD12_RS10070;Dbxref=GenBank:WP_000956043.1;Name=WP_000956043.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AD12_RS10070;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956043.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 207603 208613 . - . ID=gene-AD12_RS10065;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AD12_RS10065;old_locus_tag=AD12_2668 NZ_JJLK01000068.1 Protein Homology CDS 207603 208613 . - 0 ID=cds-WP_001275118.1;Parent=gene-AD12_RS10065;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AD12_RS10065;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 208629 210149 . - . ID=gene-AD12_RS10060;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AD12_RS10060;old_locus_tag=AD12_2669 NZ_JJLK01000068.1 Protein Homology CDS 208629 210149 . - 0 ID=cds-WP_032286586.1;Parent=gene-AD12_RS10060;Dbxref=GenBank:WP_032286586.1;Name=WP_032286586.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AD12_RS10060;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_032286586.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 210210 211208 . - . ID=gene-AD12_RS10055;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AD12_RS10055;old_locus_tag=AD12_2670 NZ_JJLK01000068.1 Protein Homology CDS 210210 211208 . - 0 ID=cds-WP_001036964.1;Parent=gene-AD12_RS10055;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AD12_RS10055;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 211488 212528 . - . ID=gene-AD12_RS10050;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AD12_RS10050;old_locus_tag=AD12_2671 NZ_JJLK01000068.1 Protein Homology CDS 211488 212528 . - 0 ID=cds-WP_000628659.1;Parent=gene-AD12_RS10050;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AD12_RS10050;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 212670 213827 . - . ID=gene-AD12_RS10045;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AD12_RS10045;old_locus_tag=AD12_2672 NZ_JJLK01000068.1 Protein Homology CDS 212670 213827 . - 0 ID=cds-WP_000440921.1;Parent=gene-AD12_RS10045;Dbxref=GenBank:WP_000440921.1;Name=WP_000440921.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AD12_RS10045;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440921.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 213844 214512 . - . ID=gene-AD12_RS10040;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AD12_RS10040;old_locus_tag=AD12_2673 NZ_JJLK01000068.1 Protein Homology CDS 213844 214512 . - 0 ID=cds-WP_001139613.1;Parent=gene-AD12_RS10040;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AD12_RS10040;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 214770 215606 . + . ID=gene-AD12_RS10035;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AD12_RS10035;old_locus_tag=AD12_2674 NZ_JJLK01000068.1 Protein Homology CDS 214770 215606 . + 0 ID=cds-WP_000425460.1;Parent=gene-AD12_RS10035;Dbxref=GenBank:WP_000425460.1;Name=WP_000425460.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311073.1;locus_tag=AD12_RS10035;product=S-formylglutathione hydrolase;protein_id=WP_000425460.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 215638 217629 . - . ID=gene-AD12_RS10030;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AD12_RS10030;old_locus_tag=AD12_2675 NZ_JJLK01000068.1 Protein Homology CDS 215638 217629 . - 0 ID=cds-WP_000489244.1;Parent=gene-AD12_RS10030;Dbxref=GenBank:WP_000489244.1;Name=WP_000489244.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AD12_RS10030;product=catecholate siderophore receptor CirA;protein_id=WP_000489244.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 217923 219392 . - . ID=gene-AD12_RS10025;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AD12_RS10025;old_locus_tag=AD12_2676 NZ_JJLK01000068.1 Protein Homology CDS 217923 219392 . - 0 ID=cds-WP_000253273.1;Parent=gene-AD12_RS10025;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AD12_RS10025;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 219597 220478 . - . ID=gene-AD12_RS10020;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AD12_RS10020;old_locus_tag=AD12_2677 NZ_JJLK01000068.1 Protein Homology CDS 219597 220478 . - 0 ID=cds-WP_000548294.1;Parent=gene-AD12_RS10020;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AD12_RS10020;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 220577 221626 . + . ID=gene-AD12_RS10015;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AD12_RS10015;old_locus_tag=AD12_2678 NZ_JJLK01000068.1 Protein Homology CDS 220577 221626 . + 0 ID=cds-WP_000182053.1;Parent=gene-AD12_RS10015;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AD12_RS10015;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 221700 222557 . + . ID=gene-AD12_RS10010;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AD12_RS10010;old_locus_tag=AD12_2679 NZ_JJLK01000068.1 Protein Homology CDS 221700 222557 . + 0 ID=cds-WP_000873890.1;Parent=gene-AD12_RS10010;Dbxref=GenBank:WP_000873890.1;Name=WP_000873890.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AD12_RS10010;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 222560 223648 . + . ID=gene-AD12_RS10005;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AD12_RS10005;old_locus_tag=AD12_2680 NZ_JJLK01000068.1 Protein Homology CDS 222560 223648 . + 0 ID=cds-WP_001064972.1;Parent=gene-AD12_RS10005;Dbxref=GenBank:WP_001064972.1;Name=WP_001064972.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311079.1;locus_tag=AD12_RS10005;product=sugar kinase;protein_id=WP_001064972.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 223704 224954 . - . ID=gene-AD12_RS10000;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AD12_RS10000;old_locus_tag=AD12_2681 NZ_JJLK01000068.1 Protein Homology CDS 223704 224954 . - 0 ID=cds-WP_000382944.1;Parent=gene-AD12_RS10000;Dbxref=GenBank:WP_000382944.1;Name=WP_000382944.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AD12_RS10000;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000382944.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 225054 225995 . - . ID=gene-AD12_RS09995;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AD12_RS09995;old_locus_tag=AD12_2682 NZ_JJLK01000068.1 Protein Homology CDS 225054 225995 . - 0 ID=cds-WP_000415455.1;Parent=gene-AD12_RS09995;Dbxref=GenBank:WP_000415455.1;Name=WP_000415455.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AD12_RS09995;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415455.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 226125 226823 . + . ID=gene-AD12_RS09990;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AD12_RS09990;old_locus_tag=AD12_2683 NZ_JJLK01000068.1 Protein Homology CDS 226125 226823 . + 0 ID=cds-WP_032286587.1;Parent=gene-AD12_RS09990;Dbxref=GenBank:WP_032286587.1;Name=WP_032286587.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AD12_RS09990;product=transcriptional regulator YeiL;protein_id=WP_032286587.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 227020 228270 . - . ID=gene-AD12_RS09985;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AD12_RS09985;old_locus_tag=AD12_2684 NZ_JJLK01000068.1 Protein Homology CDS 227020 228270 . - 0 ID=cds-WP_000353883.1;Parent=gene-AD12_RS09985;Dbxref=GenBank:WP_000353883.1;Name=WP_000353883.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AD12_RS09985;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353883.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 228364 229302 . - . ID=gene-AD12_RS09980;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AD12_RS09980;old_locus_tag=AD12_2685 NZ_JJLK01000068.1 Protein Homology CDS 228364 229302 . - 0 ID=cds-WP_001292454.1;Parent=gene-AD12_RS09980;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AD12_RS09980;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 229290 230231 . - . ID=gene-AD12_RS09975;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AD12_RS09975;old_locus_tag=AD12_2686 NZ_JJLK01000068.1 Protein Homology CDS 229290 230231 . - 0 ID=cds-WP_001208134.1;Parent=gene-AD12_RS09975;Dbxref=GenBank:WP_001208134.1;Name=WP_001208134.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708063.1;locus_tag=AD12_RS09975;product=pseudouridine kinase;protein_id=WP_001208134.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 230655 232346 . - . ID=gene-AD12_RS09970;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AD12_RS09970;old_locus_tag=AD12_2687 NZ_JJLK01000068.1 Protein Homology CDS 230655 232346 . - 0 ID=cds-WP_000854467.1;Parent=gene-AD12_RS09970;Dbxref=GenBank:WP_000854467.1;Name=WP_000854467.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708064.1;locus_tag=AD12_RS09970;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854467.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 232363 233301 . - . ID=gene-AD12_RS09965;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AD12_RS09965;old_locus_tag=AD12_2688 NZ_JJLK01000068.1 Protein Homology CDS 232363 233301 . - 0 ID=cds-WP_000091263.1;Parent=gene-AD12_RS09965;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AD12_RS09965;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 233301 234431 . - . ID=gene-AD12_RS09960;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AD12_RS09960;old_locus_tag=AD12_2689 NZ_JJLK01000068.1 Protein Homology CDS 233301 234431 . - 0 ID=cds-WP_000487247.1;Parent=gene-AD12_RS09960;Dbxref=GenBank:WP_000487247.1;Name=WP_000487247.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AD12_RS09960;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487247.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 234799 235980 . + . ID=gene-AD12_RS09955;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AD12_RS09955;old_locus_tag=AD12_2691 NZ_JJLK01000068.1 Protein Homology CDS 234799 235980 . + 0 ID=cds-WP_000551977.1;Parent=gene-AD12_RS09955;Dbxref=GenBank:WP_000551977.1;Name=WP_000551977.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311089.1;locus_tag=AD12_RS09955;product=sugar efflux transporter SetB;protein_id=WP_000551977.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 235977 236231 . - . ID=gene-AD12_RS0124335;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AD12_RS0124335;old_locus_tag=AD12_2692 NZ_JJLK01000068.1 Protein Homology CDS 235977 236231 . - 0 ID=cds-WP_000389030.1;Parent=gene-AD12_RS0124335;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AD12_RS0124335;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 236386 236958 . + . ID=gene-AD12_RS09950;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AD12_RS09950;old_locus_tag=AD12_2693 NZ_JJLK01000068.1 Protein Homology CDS 236386 236958 . + 0 ID=cds-WP_001136827.1;Parent=gene-AD12_RS09950;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AD12_RS09950;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 237181 238647 . + . ID=gene-AD12_RS09945;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AD12_RS09945;old_locus_tag=AD12_2694 NZ_JJLK01000068.1 Protein Homology CDS 237181 238647 . + 0 ID=cds-WP_000848216.1;Parent=gene-AD12_RS09945;Dbxref=GenBank:WP_000848216.1;Name=WP_000848216.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AD12_RS09945;product=mannitol dehydrogenase family protein;protein_id=WP_000848216.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 238765 239751 . + . ID=gene-AD12_RS09940;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AD12_RS09940;old_locus_tag=AD12_2695 NZ_JJLK01000068.1 Protein Homology CDS 238765 239751 . + 0 ID=cds-WP_032174141.1;Parent=gene-AD12_RS09940;Dbxref=GenBank:WP_032174141.1;Name=WP_032174141.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708072.1;locus_tag=AD12_RS09940;product=zinc-binding GTPase YeiR;protein_id=WP_032174141.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 239790 240503 . + . ID=gene-AD12_RS09935;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AD12_RS09935;old_locus_tag=AD12_2696 NZ_JJLK01000068.1 Protein Homology CDS 239790 240503 . + 0 ID=cds-WP_001296828.1;Parent=gene-AD12_RS09935;Dbxref=GenBank:WP_001296828.1;Name=WP_001296828.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AD12_RS09935;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_001296828.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 240915 241481 . + . ID=gene-AD12_RS0124340;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AD12_RS0124340;old_locus_tag=AD12_2698 NZ_JJLK01000068.1 Protein Homology CDS 240915 241481 . + 0 ID=cds-WP_000241011.1;Parent=gene-AD12_RS0124340;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AD12_RS0124340;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 241662 243218 . + . ID=gene-AD12_RS09930;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AD12_RS09930;old_locus_tag=AD12_2699 NZ_JJLK01000068.1 Protein Homology CDS 241662 243218 . + 0 ID=cds-WP_032286589.1;Parent=gene-AD12_RS09930;Dbxref=GenBank:WP_032286589.1;Name=WP_032286589.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AD12_RS09930;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032286589.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 243300 245114 . + . ID=gene-AD12_RS09925;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AD12_RS09925;old_locus_tag=AD12_2700 NZ_JJLK01000068.1 Protein Homology CDS 243300 245114 . + 0 ID=cds-WP_000637041.1;Parent=gene-AD12_RS09925;Dbxref=GenBank:WP_000637041.1;Name=WP_000637041.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AD12_RS09925;product=extracellular solute-binding protein;protein_id=WP_000637041.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 245115 246209 . + . ID=gene-AD12_RS09920;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AD12_RS09920;old_locus_tag=AD12_2701 NZ_JJLK01000068.1 Protein Homology CDS 245115 246209 . + 0 ID=cds-WP_000501604.1;Parent=gene-AD12_RS09920;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AD12_RS09920;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 246209 247234 . + . ID=gene-AD12_RS09915;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AD12_RS09915;old_locus_tag=AD12_2702 NZ_JJLK01000068.1 Protein Homology CDS 246209 247234 . + 0 ID=cds-WP_000088916.1;Parent=gene-AD12_RS09915;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AD12_RS09915;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 247236 248825 . + . ID=gene-AD12_RS09910;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AD12_RS09910;old_locus_tag=AD12_2703 NZ_JJLK01000068.1 Protein Homology CDS 247236 248825 . + 0 ID=cds-WP_000194914.1;Parent=gene-AD12_RS09910;Dbxref=GenBank:WP_000194914.1;Name=WP_000194914.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AD12_RS09910;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000194914.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 248829 249173 . - . ID=gene-AD12_RS09905;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AD12_RS09905;old_locus_tag=AD12_2704 NZ_JJLK01000068.1 Protein Homology CDS 248829 249173 . - 0 ID=cds-WP_000202791.1;Parent=gene-AD12_RS09905;Dbxref=GenBank:WP_000202791.1;Name=WP_000202791.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AD12_RS09905;product=YejG family protein;protein_id=WP_000202791.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 249507 250697 . - . ID=gene-AD12_RS09900;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AD12_RS09900;old_locus_tag=AD12_2705 NZ_JJLK01000068.1 Protein Homology CDS 249507 250697 . - 0 ID=cds-WP_000213385.1;Parent=gene-AD12_RS09900;Dbxref=GenBank:WP_000213385.1;Name=WP_000213385.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311101.1;locus_tag=AD12_RS09900;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213385.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 250725 251420 . - . ID=gene-AD12_RS09895;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AD12_RS09895;old_locus_tag=AD12_2706 NZ_JJLK01000068.1 Protein Homology CDS 250725 251420 . - 0 ID=cds-WP_001234850.1;Parent=gene-AD12_RS09895;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AD12_RS09895;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 251570 253330 . + . ID=gene-AD12_RS09890;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AD12_RS09890;old_locus_tag=AD12_2707 NZ_JJLK01000068.1 Protein Homology CDS 251570 253330 . + 0 ID=cds-WP_000578079.1;Parent=gene-AD12_RS09890;Dbxref=GenBank:WP_000578079.1;Name=WP_000578079.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708083.1;locus_tag=AD12_RS09890;product=DEAD/DEAH box helicase;protein_id=WP_000578079.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 253455 253739 . + . ID=gene-AD12_RS09885;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AD12_RS09885;old_locus_tag=AD12_2708 NZ_JJLK01000068.1 Protein Homology CDS 253455 253739 . + 0 ID=cds-WP_000494183.1;Parent=gene-AD12_RS09885;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AD12_RS09885;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 253878 254885 . - . ID=gene-AD12_RS09880;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AD12_RS09880;old_locus_tag=AD12_2710 NZ_JJLK01000068.1 Protein Homology CDS 253878 254885 . - 0 ID=cds-WP_000050795.1;Parent=gene-AD12_RS09880;Dbxref=GenBank:WP_000050795.1;Name=WP_000050795.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311105.1;locus_tag=AD12_RS09880;product=nucleoid-associated protein YejK;protein_id=WP_000050795.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 255067 255294 . + . ID=gene-AD12_RS09875;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AD12_RS09875;old_locus_tag=AD12_2712 NZ_JJLK01000068.1 Protein Homology CDS 255067 255294 . + 0 ID=cds-WP_001135667.1;Parent=gene-AD12_RS09875;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AD12_RS09875;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 255314 257074 . + . ID=gene-AD12_RS09870;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AD12_RS09870;old_locus_tag=AD12_2713 NZ_JJLK01000068.1 Protein Homology CDS 255314 257074 . + 0 ID=cds-WP_000256203.1;Parent=gene-AD12_RS09870;Dbxref=GenBank:WP_000256203.1;Name=WP_000256203.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AD12_RS09870;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256203.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 257149 257225 . + . ID=gene-AD12_RS09865;Name=AD12_RS09865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS09865;old_locus_tag=AD12_2714 NZ_JJLK01000068.1 tRNAscan-SE tRNA 257149 257225 . + . ID=rna-AD12_RS09865;Parent=gene-AD12_RS09865;anticodon=(pos:257183..257185);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS09865;product=tRNA-Pro NZ_JJLK01000068.1 tRNAscan-SE exon 257149 257225 . + . ID=exon-AD12_RS09865-1;Parent=rna-AD12_RS09865;anticodon=(pos:257183..257185);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS09865;product=tRNA-Pro NZ_JJLK01000068.1 RefSeq gene 257327 259696 . - . ID=gene-AD12_RS09860;Name=AD12_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09860;old_locus_tag=AD12_2715 NZ_JJLK01000068.1 Protein Homology CDS 257327 259696 . - 0 ID=cds-WP_050480833.1;Parent=gene-AD12_RS09860;Dbxref=GenBank:WP_050480833.1;Name=WP_050480833.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AD12_RS09860;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_050480833.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 260016 260663 . + . ID=gene-AD12_RS09855;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AD12_RS09855;old_locus_tag=AD12_2716 NZ_JJLK01000068.1 Protein Homology CDS 260016 260663 . + 0 ID=cds-WP_001113637.1;Parent=gene-AD12_RS09855;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AD12_RS09855;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 260698 261750 . - . ID=gene-AD12_RS09850;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AD12_RS09850;old_locus_tag=AD12_2717 NZ_JJLK01000068.1 Protein Homology CDS 260698 261750 . - 0 ID=cds-WP_001211575.1;Parent=gene-AD12_RS09850;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AD12_RS09850;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 261747 262304 . - . ID=gene-AD12_RS09845;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AD12_RS09845;old_locus_tag=AD12_2718 NZ_JJLK01000068.1 Protein Homology CDS 261747 262304 . - 0 ID=cds-WP_000824439.1;Parent=gene-AD12_RS09845;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AD12_RS09845;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 262301 264244 . - . ID=gene-AD12_RS09840;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AD12_RS09840;old_locus_tag=AD12_2719 NZ_JJLK01000068.1 Protein Homology CDS 262301 264244 . - 0 ID=cds-WP_000982453.1;Parent=gene-AD12_RS09840;Dbxref=GenBank:WP_000982453.1;Name=WP_000982453.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311112.1;locus_tag=AD12_RS09840;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982453.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 264241 264720 . - . ID=gene-AD12_RS09835;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AD12_RS09835;old_locus_tag=AD12_2720 NZ_JJLK01000068.1 Protein Homology CDS 264241 264720 . - 0 ID=cds-WP_001026418.1;Parent=gene-AD12_RS09835;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AD12_RS09835;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 264717 264926 . - . ID=gene-AD12_RS09830;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AD12_RS09830;old_locus_tag=AD12_2721 NZ_JJLK01000068.1 Protein Homology CDS 264717 264926 . - 0 ID=cds-WP_000186540.1;Parent=gene-AD12_RS09830;Dbxref=GenBank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AD12_RS09830;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 264923 265660 . - . ID=gene-AD12_RS09825;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AD12_RS09825;old_locus_tag=AD12_2722 NZ_JJLK01000068.1 Protein Homology CDS 264923 265660 . - 0 ID=cds-WP_001295447.1;Parent=gene-AD12_RS09825;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AD12_RS09825;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 265702 266364 . - . ID=gene-AD12_RS09820;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AD12_RS09820;old_locus_tag=AD12_2723 NZ_JJLK01000068.1 Protein Homology CDS 265702 266364 . - 0 ID=cds-WP_000971730.1;Parent=gene-AD12_RS09820;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AD12_RS09820;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 266361 266984 . - . ID=gene-AD12_RS09815;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AD12_RS09815;old_locus_tag=AD12_2724 NZ_JJLK01000068.1 Protein Homology CDS 266361 266984 . - 0 ID=cds-WP_000525587.1;Parent=gene-AD12_RS09815;Dbxref=GenBank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AD12_RS09815;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 266997 267599 . - . ID=gene-AD12_RS09810;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AD12_RS09810;old_locus_tag=AD12_2725 NZ_JJLK01000068.1 Protein Homology CDS 266997 267599 . - 0 ID=cds-WP_000528376.1;Parent=gene-AD12_RS09810;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AD12_RS09810;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 267609 268058 . - . ID=gene-AD12_RS09805;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AD12_RS09805;old_locus_tag=AD12_2726 NZ_JJLK01000068.1 Protein Homology CDS 267609 268058 . - 0 ID=cds-WP_000835177.1;Parent=gene-AD12_RS09805;Dbxref=GenBank:WP_000835177.1;Name=WP_000835177.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AD12_RS09805;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835177.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 268055 268918 . - . ID=gene-AD12_RS09800;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AD12_RS09800;old_locus_tag=AD12_2727 NZ_JJLK01000068.1 Protein Homology CDS 268055 268918 . - 0 ID=cds-WP_000013515.1;Parent=gene-AD12_RS09800;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AD12_RS09800;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 268905 269600 . - . ID=gene-AD12_RS09795;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AD12_RS09795;old_locus_tag=AD12_2728 NZ_JJLK01000068.1 Protein Homology CDS 268905 269600 . - 0 ID=cds-WP_000091291.1;Parent=gene-AD12_RS09795;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AD12_RS09795;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 269607 272093 . - . ID=gene-AD12_RS09790;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AD12_RS09790;old_locus_tag=AD12_2729 NZ_JJLK01000068.1 Protein Homology CDS 269607 272093 . - 0 ID=cds-WP_000778067.1;Parent=gene-AD12_RS09790;Dbxref=GenBank:WP_000778067.1;Name=WP_000778067.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=AD12_RS09790;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778067.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 272090 272353 . - . ID=gene-AD12_RS09785;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AD12_RS09785;old_locus_tag=AD12_2730 NZ_JJLK01000068.1 Protein Homology CDS 272090 272353 . - 0 ID=cds-WP_000557378.1;Parent=gene-AD12_RS09785;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AD12_RS09785;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 272343 272837 . - . ID=gene-AD12_RS09780;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AD12_RS09780;old_locus_tag=AD12_2731 NZ_JJLK01000068.1 Protein Homology CDS 272343 272837 . - 0 ID=cds-WP_000686723.1;Parent=gene-AD12_RS09780;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AD12_RS09780;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 272946 273110 . + . ID=gene-AD12_RS29700;Name=AD12_RS29700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29700 NZ_JJLK01000068.1 Protein Homology CDS 272946 273110 . + 0 ID=cds-WP_032286594.1;Parent=gene-AD12_RS29700;Dbxref=GenBank:WP_032286594.1;Name=WP_032286594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AD12_RS29700;product=hypothetical protein;protein_id=WP_032286594.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 273224 273733 . + . ID=gene-AD12_RS09775;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AD12_RS09775;old_locus_tag=AD12_2732 NZ_JJLK01000068.1 Protein Homology CDS 273224 273733 . + 0 ID=cds-WP_282916219.1;Parent=gene-AD12_RS09775;Dbxref=GenBank:WP_282916219.1;Name=WP_282916219.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AD12_RS09775;product=serine protease inhibitor ecotin;protein_id=WP_282916219.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 274111 275757 . - . ID=gene-AD12_RS09770;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AD12_RS09770;old_locus_tag=AD12_2733 NZ_JJLK01000068.1 Protein Homology CDS 274111 275757 . - 0 ID=cds-WP_000758073.1;Parent=gene-AD12_RS09770;Dbxref=GenBank:WP_000758073.1;Name=WP_000758073.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AD12_RS09770;product=malate dehydrogenase (quinone);protein_id=WP_000758073.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 275975 277618 . - . ID=gene-AD12_RS09765;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AD12_RS09765;old_locus_tag=AD12_2734 NZ_JJLK01000068.1 Protein Homology CDS 275975 277618 . - 0 ID=cds-WP_000422188.1;Parent=gene-AD12_RS09765;Dbxref=GenBank:WP_000422188.1;Name=WP_000422188.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AD12_RS09765;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422188.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 277694 278344 . - . ID=gene-AD12_RS09760;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AD12_RS09760;old_locus_tag=AD12_2735 NZ_JJLK01000068.1 Protein Homology CDS 277694 278344 . - 0 ID=cds-WP_000884919.1;Parent=gene-AD12_RS09760;Dbxref=GenBank:WP_000884919.1;Name=WP_000884919.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AD12_RS09760;product=DNA oxidative demethylase AlkB;protein_id=WP_000884919.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 278344 279408 . - . ID=gene-AD12_RS09755;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AD12_RS09755;old_locus_tag=AD12_2736 NZ_JJLK01000068.1 Protein Homology CDS 278344 279408 . - 0 ID=cds-WP_000710375.1;Parent=gene-AD12_RS09755;Dbxref=GenBank:WP_000710375.1;Name=WP_000710375.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AD12_RS09755;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000710375.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 279482 280537 . - . ID=gene-AD12_RS09750;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AD12_RS09750;old_locus_tag=AD12_2737 NZ_JJLK01000068.1 Protein Homology CDS 279482 280537 . - 0 ID=cds-WP_000406055.1;Parent=gene-AD12_RS09750;Dbxref=GenBank:WP_000406055.1;Name=WP_000406055.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AD12_RS09750;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406055.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 280649 281752 . - . ID=gene-AD12_RS09745;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD12_RS09745;old_locus_tag=AD12_2738 NZ_JJLK01000068.1 Protein Homology CDS 280649 281752 . - 0 ID=cds-WP_000865577.1;Parent=gene-AD12_RS09745;Dbxref=GenBank:WP_000865577.1;Name=WP_000865577.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AD12_RS09745;product=porin OmpC;protein_id=WP_000865577.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 282491 285163 . + . ID=gene-AD12_RS09735;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AD12_RS09735;old_locus_tag=AD12_2740 NZ_JJLK01000068.1 Protein Homology CDS 282491 285163 . + 0 ID=cds-WP_001249146.1;Parent=gene-AD12_RS09735;Dbxref=GenBank:WP_001249146.1;Name=WP_001249146.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311132.1;locus_tag=AD12_RS09735;product=phosphotransferase RcsD;protein_id=WP_001249146.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 285180 285830 . + . ID=gene-AD12_RS09730;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AD12_RS09730;old_locus_tag=AD12_2741 NZ_JJLK01000068.1 Protein Homology CDS 285180 285830 . + 0 ID=cds-WP_001061917.1;Parent=gene-AD12_RS09730;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AD12_RS09730;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 286030 288879 . - . ID=gene-AD12_RS09725;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AD12_RS09725;old_locus_tag=AD12_2742 NZ_JJLK01000068.1 Protein Homology CDS 286030 288879 . - 0 ID=cds-WP_032286597.1;Parent=gene-AD12_RS09725;Dbxref=GenBank:WP_032286597.1;Name=WP_032286597.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AD12_RS09725;product=two-component system sensor histidine kinase RcsC;protein_id=WP_032286597.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 289046 290872 . + . ID=gene-AD12_RS09720;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AD12_RS09720;old_locus_tag=AD12_2743 NZ_JJLK01000068.1 Protein Homology CDS 289046 290872 . + 0 ID=cds-WP_032286599.1;Parent=gene-AD12_RS09720;Dbxref=GenBank:WP_032286599.1;Name=WP_032286599.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AD12_RS09720;product=two-component system sensor histidine kinase AtoS;protein_id=WP_032286599.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 290869 292254 . + . ID=gene-AD12_RS09715;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AD12_RS09715;old_locus_tag=AD12_2744 NZ_JJLK01000068.1 Protein Homology CDS 290869 292254 . + 0 ID=cds-WP_000125282.1;Parent=gene-AD12_RS09715;Dbxref=GenBank:WP_000125282.1;Name=WP_000125282.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AD12_RS09715;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125282.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 292450 293112 . + . ID=gene-AD12_RS09710;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AD12_RS09710;old_locus_tag=AD12_2745 NZ_JJLK01000068.1 Protein Homology CDS 292450 293112 . + 0 ID=cds-WP_000850540.1;Parent=gene-AD12_RS09710;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AD12_RS09710;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 293112 293762 . + . ID=gene-AD12_RS09705;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AD12_RS09705;old_locus_tag=AD12_2746 NZ_JJLK01000068.1 Protein Homology CDS 293112 293762 . + 0 ID=cds-WP_000339065.1;Parent=gene-AD12_RS09705;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AD12_RS09705;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 293759 295081 . + . ID=gene-AD12_RS09700;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AD12_RS09700;old_locus_tag=AD12_2747 NZ_JJLK01000068.1 Protein Homology CDS 293759 295081 . + 0 ID=cds-WP_000580284.1;Parent=gene-AD12_RS09700;Dbxref=GenBank:WP_000580284.1;Name=WP_000580284.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AD12_RS09700;product=TIGR00366 family protein;protein_id=WP_000580284.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 295112 296296 . + . ID=gene-AD12_RS09695;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AD12_RS09695;old_locus_tag=AD12_2748 NZ_JJLK01000068.1 Protein Homology CDS 295112 296296 . + 0 ID=cds-WP_000786527.1;Parent=gene-AD12_RS09695;Dbxref=GenBank:WP_000786527.1;Name=WP_000786527.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AD12_RS09695;product=acetyl-CoA acetyltransferase;protein_id=WP_000786527.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 296370 297146 . - . ID=gene-AD12_RS09690;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AD12_RS09690;old_locus_tag=AD12_2749 NZ_JJLK01000068.1 Protein Homology CDS 296370 297146 . - 0 ID=cds-WP_001225855.1;Parent=gene-AD12_RS09690;Dbxref=GenBank:WP_001225855.1;Name=WP_001225855.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311135.1;locus_tag=AD12_RS09690;product=YfaP family protein;protein_id=WP_001225855.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 297151 298800 . - . ID=gene-AD12_RS09685;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AD12_RS09685;old_locus_tag=AD12_2750 NZ_JJLK01000068.1 Protein Homology CDS 297151 298800 . - 0 ID=cds-WP_001104528.1;Parent=gene-AD12_RS09685;Dbxref=GenBank:WP_001104528.1;Name=WP_001104528.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AD12_RS09685;product=YfaQ family protein;protein_id=WP_001104528.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 298801 303315 . - . ID=gene-AD12_RS09680;Name=AD12_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09680;old_locus_tag=AD12_2751 NZ_JJLK01000068.1 Protein Homology CDS 298801 303315 . - 0 ID=cds-WP_032286602.1;Parent=gene-AD12_RS09680;Dbxref=GenBank:WP_032286602.1;Name=WP_032286602.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AD12_RS09680;product=alpha-2-macroglobulin family protein;protein_id=WP_032286602.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 303339 303962 . - . ID=gene-AD12_RS09675;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=AD12_RS09675;old_locus_tag=AD12_2752 NZ_JJLK01000068.1 Protein Homology CDS 303339 303962 . - 0 ID=cds-WP_001323797.1;Parent=gene-AD12_RS09675;Dbxref=GenBank:WP_001323797.1;Name=WP_001323797.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AD12_RS09675;product=DUF1175 domain-containing protein;protein_id=WP_001323797.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 303959 305647 . - . ID=gene-AD12_RS09670;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AD12_RS09670;old_locus_tag=AD12_2753 NZ_JJLK01000068.1 Protein Homology CDS 303959 305647 . - 0 ID=cds-WP_000012285.1;Parent=gene-AD12_RS09670;Dbxref=GenBank:WP_000012285.1;Name=WP_000012285.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AD12_RS09670;product=DUF2138 domain-containing protein;protein_id=WP_000012285.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 305796 308423 . - . ID=gene-AD12_RS09665;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AD12_RS09665;old_locus_tag=AD12_2754 NZ_JJLK01000068.1 Protein Homology CDS 305796 308423 . - 0 ID=cds-WP_001281242.1;Parent=gene-AD12_RS09665;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AD12_RS09665;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 308570 309292 . + . ID=gene-AD12_RS09660;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AD12_RS09660;old_locus_tag=AD12_2755 NZ_JJLK01000068.1 Protein Homology CDS 308570 309292 . + 0 ID=cds-WP_000990753.1;Parent=gene-AD12_RS09660;Dbxref=GenBank:WP_000990753.1;Name=WP_000990753.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AD12_RS09660;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990753.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 309420 313172 . - . ID=gene-AD12_RS09655;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AD12_RS09655;old_locus_tag=AD12_2756 NZ_JJLK01000068.1 Protein Homology CDS 309420 313172 . - 0 ID=cds-WP_032178101.1;Parent=gene-AD12_RS09655;Dbxref=GenBank:WP_032178101.1;Name=WP_032178101.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AD12_RS09655;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_032178101.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 313597 313740 . - . ID=gene-AD12_RS29705;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AD12_RS29705 NZ_JJLK01000068.1 Protein Homology CDS 313597 313740 . - 0 ID=cds-WP_001753443.1;Parent=gene-AD12_RS29705;Dbxref=GenBank:WP_001753443.1;Name=WP_001753443.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AD12_RS29705;product=protein YpaB;protein_id=WP_001753443.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 313868 316153 . + . ID=gene-AD12_RS09650;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AD12_RS09650;old_locus_tag=AD12_2757 NZ_JJLK01000068.1 Protein Homology CDS 313868 316153 . + 0 ID=cds-WP_001075172.1;Parent=gene-AD12_RS09650;Dbxref=GenBank:WP_001075172.1;Name=WP_001075172.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AD12_RS09650;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075172.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 316388 317518 . + . ID=gene-AD12_RS09645;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AD12_RS09645;old_locus_tag=AD12_2758 NZ_JJLK01000068.1 Protein Homology CDS 316388 317518 . + 0 ID=cds-WP_000332036.1;Parent=gene-AD12_RS09645;Dbxref=GenBank:WP_000332036.1;Name=WP_000332036.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AD12_RS09645;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332036.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 317518 317772 . + . ID=gene-AD12_RS09640;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AD12_RS09640;old_locus_tag=AD12_2759 NZ_JJLK01000068.1 Protein Homology CDS 317518 317772 . + 0 ID=cds-WP_000135040.1;Parent=gene-AD12_RS09640;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AD12_RS09640;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 317826 318476 . - . ID=gene-AD12_RS09635;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AD12_RS09635;old_locus_tag=AD12_2760 NZ_JJLK01000068.1 Protein Homology CDS 317826 318476 . - 0 ID=cds-WP_001462629.1;Parent=gene-AD12_RS09635;Dbxref=GenBank:WP_001462629.1;Name=WP_001462629.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AD12_RS09635;product=lipopolysaccharide kinase InaA;protein_id=WP_001462629.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 318556 318660 . - . ID=gene-AD12_RS29540;Name=AD12_RS29540;end_range=318660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29540;partial=true;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 318556 318660 . - 0 ID=cds-AD12_RS29540;Parent=gene-AD12_RS29540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=318660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AD12_RS29540;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 318655 318897 . + . ID=gene-AD12_RS09630;Name=AD12_RS09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS09630;old_locus_tag=AD12_2761;partial=true;pseudo=true;start_range=.,318655 NZ_JJLK01000068.1 Protein Homology CDS 318655 318897 . + 0 ID=cds-AD12_RS09630;Parent=gene-AD12_RS09630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AD12_RS09630;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,318655;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 319363 320433 . + . ID=gene-AD12_RS09625;Name=AD12_RS09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS09625;old_locus_tag=AD12_2763;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 319363 320433 . + 0 ID=cds-AD12_RS09625;Parent=gene-AD12_RS09625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311150.1;locus_tag=AD12_RS09625;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 320652 321728 . - . ID=gene-AD12_RS09620;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AD12_RS09620;old_locus_tag=AD12_2764 NZ_JJLK01000068.1 Protein Homology CDS 320652 321728 . - 0 ID=cds-WP_000779091.1;Parent=gene-AD12_RS09620;Dbxref=GenBank:WP_000779091.1;Name=WP_000779091.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311151.1;locus_tag=AD12_RS09620;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779091.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 321733 323091 . - . ID=gene-AD12_RS09615;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AD12_RS09615;old_locus_tag=AD12_2765 NZ_JJLK01000068.1 Protein Homology CDS 321733 323091 . - 0 ID=cds-WP_000948732.1;Parent=gene-AD12_RS09615;Dbxref=GenBank:WP_000948732.1;Name=WP_000948732.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AD12_RS09615;product=glycerol-3-phosphate transporter;protein_id=WP_000948732.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 323364 324992 . + . ID=gene-AD12_RS09610;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AD12_RS09610;old_locus_tag=AD12_2767 NZ_JJLK01000068.1 Protein Homology CDS 323364 324992 . + 0 ID=cds-WP_000857257.1;Parent=gene-AD12_RS09610;Dbxref=GenBank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AD12_RS09610;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 324982 326241 . + . ID=gene-AD12_RS09605;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AD12_RS09605;old_locus_tag=AD12_2768 NZ_JJLK01000068.1 Protein Homology CDS 324982 326241 . + 0 ID=cds-WP_001209922.1;Parent=gene-AD12_RS09605;Dbxref=GenBank:WP_001209922.1;Name=WP_001209922.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AD12_RS09605;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209922.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 326238 327428 . + . ID=gene-AD12_RS09600;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AD12_RS09600;old_locus_tag=AD12_2769 NZ_JJLK01000068.1 Protein Homology CDS 326238 327428 . + 0 ID=cds-WP_001000358.1;Parent=gene-AD12_RS09600;Dbxref=GenBank:WP_001000358.1;Name=WP_001000358.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AD12_RS09600;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000358.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 327622 328524 . + . ID=gene-AD12_RS09595;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AD12_RS09595;old_locus_tag=AD12_2770 NZ_JJLK01000068.1 Protein Homology CDS 327622 328524 . + 0 ID=cds-WP_000140570.1;Parent=gene-AD12_RS09595;Dbxref=GenBank:WP_000140570.1;Name=WP_000140570.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311156.1;locus_tag=AD12_RS09595;product=ISNCY family transposase;protein_id=WP_000140570.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 328565 329026 . - . ID=gene-AD12_RS09590;Name=AD12_RS09590;end_range=329026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS09590;old_locus_tag=AD12_2771;partial=true;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 328565 329026 . - 0 ID=cds-AD12_RS09590;Parent=gene-AD12_RS09590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824;end_range=329026,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AD12_RS09590;partial=true;product=aldolase/citrate lyase family protein;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 329090 330292 . - . ID=gene-AD12_RS09585;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AD12_RS09585;old_locus_tag=AD12_2772 NZ_JJLK01000068.1 Protein Homology CDS 329090 330292 . - 0 ID=cds-WP_000921619.1;Parent=gene-AD12_RS09585;Dbxref=GenBank:WP_000921619.1;Name=WP_000921619.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AD12_RS09585;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921619.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 330392 330934 . - . ID=gene-AD12_RS09580;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AD12_RS09580;old_locus_tag=AD12_2773 NZ_JJLK01000068.1 Protein Homology CDS 330392 330934 . - 0 ID=cds-WP_000717009.1;Parent=gene-AD12_RS09580;Dbxref=GenBank:WP_000717009.1;Name=WP_000717009.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=AD12_RS09580;product=YfaZ family outer membrane protein;protein_id=WP_000717009.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 331213 331638 . + . ID=gene-AD12_RS09575;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AD12_RS09575;old_locus_tag=AD12_2774 NZ_JJLK01000068.1 Protein Homology CDS 331213 331638 . + 0 ID=cds-WP_001249889.1;Parent=gene-AD12_RS09575;Dbxref=GenBank:WP_001249889.1;Name=WP_001249889.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=AD12_RS09575;product=nucleoside triphosphatase NudI;protein_id=WP_001249889.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 331677 332279 . - . ID=gene-AD12_RS09570;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AD12_RS09570;old_locus_tag=AD12_2775 NZ_JJLK01000068.1 Protein Homology CDS 331677 332279 . - 0 ID=cds-WP_001297077.1;Parent=gene-AD12_RS09570;Dbxref=GenBank:WP_001297077.1;Name=WP_001297077.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311167.1;locus_tag=AD12_RS09570;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_001297077.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 332587 333726 . + . ID=gene-AD12_RS09565;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AD12_RS09565;old_locus_tag=AD12_2776 NZ_JJLK01000068.1 Protein Homology CDS 332587 333726 . + 0 ID=cds-WP_001288720.1;Parent=gene-AD12_RS09565;Dbxref=GenBank:WP_001288720.1;Name=WP_001288720.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AD12_RS09565;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001288720.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 333730 334698 . + . ID=gene-AD12_RS09560;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AD12_RS09560;old_locus_tag=AD12_2777 NZ_JJLK01000068.1 Protein Homology CDS 333730 334698 . + 0 ID=cds-WP_000461657.1;Parent=gene-AD12_RS09560;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AD12_RS09560;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 334698 336680 . + . ID=gene-AD12_RS09555;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AD12_RS09555;old_locus_tag=AD12_2778 NZ_JJLK01000068.1 Protein Homology CDS 334698 336680 . + 0 ID=cds-WP_001363173.1;Parent=gene-AD12_RS09555;Dbxref=GenBank:WP_001363173.1;Name=WP_001363173.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311170.1;locus_tag=AD12_RS09555;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_001363173.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 336677 337567 . + . ID=gene-AD12_RS09550;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AD12_RS09550;old_locus_tag=AD12_2779 NZ_JJLK01000068.1 Protein Homology CDS 336677 337567 . + 0 ID=cds-WP_000169728.1;Parent=gene-AD12_RS09550;Dbxref=GenBank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AD12_RS09550;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 337567 339219 . + . ID=gene-AD12_RS09545;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AD12_RS09545;old_locus_tag=AD12_2780 NZ_JJLK01000068.1 Protein Homology CDS 337567 339219 . + 0 ID=cds-WP_000844055.1;Parent=gene-AD12_RS09545;Dbxref=GenBank:WP_000844055.1;Name=WP_000844055.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AD12_RS09545;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844055.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 339216 339551 . + . ID=gene-AD12_RS09540;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AD12_RS09540;old_locus_tag=AD12_2781 NZ_JJLK01000068.1 Protein Homology CDS 339216 339551 . + 0 ID=cds-WP_000638031.1;Parent=gene-AD12_RS09540;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AD12_RS09540;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 339551 339937 . + . ID=gene-AD12_RS09535;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AD12_RS09535;old_locus_tag=AD12_2782 NZ_JJLK01000068.1 Protein Homology CDS 339551 339937 . + 0 ID=cds-WP_000523879.1;Parent=gene-AD12_RS09535;Dbxref=GenBank:WP_000523879.1;Name=WP_000523879.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AD12_RS09535;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523879.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 339931 340197 . - . ID=gene-AD12_RS09530;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AD12_RS09530;old_locus_tag=AD12_2783 NZ_JJLK01000068.1 Protein Homology CDS 339931 340197 . - 0 ID=cds-WP_001295285.1;Parent=gene-AD12_RS09530;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AD12_RS09530;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 340307 341662 . - . ID=gene-AD12_RS09525;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AD12_RS09525;old_locus_tag=AD12_2784 NZ_JJLK01000068.1 Protein Homology CDS 340307 341662 . - 0 ID=cds-WP_000577607.1;Parent=gene-AD12_RS09525;Dbxref=GenBank:WP_000577607.1;Name=WP_000577607.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AD12_RS09525;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577607.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 341659 342621 . - . ID=gene-AD12_RS09520;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AD12_RS09520;old_locus_tag=AD12_2785 NZ_JJLK01000068.1 Protein Homology CDS 341659 342621 . - 0 ID=cds-WP_001255632.1;Parent=gene-AD12_RS09520;Dbxref=GenBank:WP_001255632.1;Name=WP_001255632.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=AD12_RS09520;product=o-succinylbenzoate synthase;protein_id=WP_001255632.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 342621 343478 . - . ID=gene-AD12_RS09515;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AD12_RS09515;old_locus_tag=AD12_2786 NZ_JJLK01000068.1 Protein Homology CDS 342621 343478 . - 0 ID=cds-WP_000639996.1;Parent=gene-AD12_RS09515;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AD12_RS09515;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 343493 344251 . - . ID=gene-AD12_RS09510;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AD12_RS09510;old_locus_tag=AD12_2787 NZ_JJLK01000068.1 Protein Homology CDS 343493 344251 . - 0 ID=cds-WP_000600503.1;Parent=gene-AD12_RS09510;Dbxref=GenBank:WP_000600503.1;Name=WP_000600503.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AD12_RS09510;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600503.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 344248 345918 . - . ID=gene-AD12_RS09505;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AD12_RS09505;old_locus_tag=AD12_2788 NZ_JJLK01000068.1 Protein Homology CDS 344248 345918 . - 0 ID=cds-WP_001295284.1;Parent=gene-AD12_RS09505;Dbxref=GenBank:WP_001295284.1;Name=WP_001295284.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AD12_RS09505;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001295284.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 346007 347302 . - . ID=gene-AD12_RS09500;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AD12_RS09500;old_locus_tag=AD12_2789 NZ_JJLK01000068.1 Protein Homology CDS 346007 347302 . - 0 ID=cds-WP_001191399.1;Parent=gene-AD12_RS09500;Dbxref=GenBank:WP_001191399.1;Name=WP_001191399.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=AD12_RS09500;product=isochorismate synthase MenF;protein_id=WP_001191399.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 347381 347686 . - . ID=gene-AD12_RS09495;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AD12_RS09495;old_locus_tag=AD12_2790 NZ_JJLK01000068.1 Protein Homology CDS 347381 347686 . - 0 ID=cds-WP_000070626.1;Parent=gene-AD12_RS09495;Dbxref=GenBank:WP_000070626.1;Name=WP_000070626.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AD12_RS09495;product=stress response protein ElaB;protein_id=WP_000070626.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 347741 348202 . - . ID=gene-AD12_RS09490;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AD12_RS09490;old_locus_tag=AD12_2791 NZ_JJLK01000068.1 Protein Homology CDS 347741 348202 . - 0 ID=cds-WP_000574091.1;Parent=gene-AD12_RS09490;Dbxref=GenBank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=AD12_RS09490;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 348267 349184 . + . ID=gene-AD12_RS09485;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AD12_RS09485;old_locus_tag=AD12_2792 NZ_JJLK01000068.1 Protein Homology CDS 348267 349184 . + 0 ID=cds-WP_001300687.1;Parent=gene-AD12_RS09485;Dbxref=GenBank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AD12_RS09485;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 349372 350591 . + . ID=gene-AD12_RS0124365;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=AD12_RS0124365;pseudo=true NZ_JJLK01000068.1 Protein Homology CDS 349372 350591 . + 0 ID=cds-AD12_RS0124365;Parent=gene-AD12_RS0124365;Note=frameshifted;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AD12_RS0124365;product=deubiquitinase ElaD;pseudo=true;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 350662 352416 . - . ID=gene-AD12_RS09480;Name=yfbK;gbkey=Gene;gene=yfbK;gene_biotype=protein_coding;locus_tag=AD12_RS09480;old_locus_tag=AD12_2796 NZ_JJLK01000068.1 Protein Homology CDS 350662 352416 . - 0 ID=cds-WP_001323806.1;Parent=gene-AD12_RS09480;Dbxref=GenBank:WP_001323806.1;Name=WP_001323806.1;gbkey=CDS;gene=yfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416773.1;locus_tag=AD12_RS09480;product=vWA domain-containing protein;protein_id=WP_001323806.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 352554 353525 . + . ID=gene-AD12_RS09475;Name=yfbL;gbkey=Gene;gene=yfbL;gene_biotype=protein_coding;locus_tag=AD12_RS09475;old_locus_tag=AD12_2797 NZ_JJLK01000068.1 Protein Homology CDS 352554 353525 . + 0 ID=cds-WP_000723495.1;Parent=gene-AD12_RS09475;Dbxref=GenBank:WP_000723495.1;Name=WP_000723495.1;gbkey=CDS;gene=yfbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=AD12_RS09475;product=M28 family metallopeptidase;protein_id=WP_000723495.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 353628 354131 . + . ID=gene-AD12_RS09470;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AD12_RS09470;old_locus_tag=AD12_2798 NZ_JJLK01000068.1 Protein Homology CDS 353628 354131 . + 0 ID=cds-WP_000525365.1;Parent=gene-AD12_RS09470;Dbxref=GenBank:WP_000525365.1;Name=WP_000525365.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AD12_RS09470;product=YfbM family protein;protein_id=WP_000525365.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 354198 355655 . - . ID=gene-AD12_RS09465;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AD12_RS09465;old_locus_tag=AD12_2799 NZ_JJLK01000068.1 Protein Homology CDS 354198 355655 . - 0 ID=cds-WP_000156716.1;Parent=gene-AD12_RS09465;Dbxref=GenBank:WP_000156716.1;Name=WP_000156716.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AD12_RS09465;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156716.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 355662 357191 . - . ID=gene-AD12_RS09460;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AD12_RS09460;old_locus_tag=AD12_2800 NZ_JJLK01000068.1 Protein Homology CDS 355662 357191 . - 0 ID=cds-WP_000926441.1;Parent=gene-AD12_RS09460;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AD12_RS09460;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 357355 359196 . - . ID=gene-AD12_RS09455;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AD12_RS09455;old_locus_tag=AD12_2801 NZ_JJLK01000068.1 Protein Homology CDS 357355 359196 . - 0 ID=cds-WP_001056635.1;Parent=gene-AD12_RS09455;Dbxref=GenBank:WP_001056635.1;Name=WP_001056635.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AD12_RS09455;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056635.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 359193 359495 . - . ID=gene-AD12_RS09450;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AD12_RS09450;old_locus_tag=AD12_2802 NZ_JJLK01000068.1 Protein Homology CDS 359193 359495 . - 0 ID=cds-WP_000612644.1;Parent=gene-AD12_RS09450;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AD12_RS09450;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 359492 360046 . - . ID=gene-AD12_RS09445;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AD12_RS09445;old_locus_tag=AD12_2803 NZ_JJLK01000068.1 Protein Homology CDS 359492 360046 . - 0 ID=cds-WP_000393511.1;Parent=gene-AD12_RS09445;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AD12_RS09445;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 360058 360600 . - . ID=gene-AD12_RS09440;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AD12_RS09440;old_locus_tag=AD12_2804 NZ_JJLK01000068.1 Protein Homology CDS 360058 360600 . - 0 ID=cds-WP_000172749.1;Parent=gene-AD12_RS09440;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AD12_RS09440;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 360615 361592 . - . ID=gene-AD12_RS09435;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AD12_RS09435;old_locus_tag=AD12_2805 NZ_JJLK01000068.1 Protein Homology CDS 360615 361592 . - 0 ID=cds-WP_032286606.1;Parent=gene-AD12_RS09435;Dbxref=GenBank:WP_032286606.1;Name=WP_032286606.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AD12_RS09435;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_032286606.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 361589 364315 . - . ID=gene-AD12_RS09430;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AD12_RS09430;old_locus_tag=AD12_2806 NZ_JJLK01000068.1 Protein Homology CDS 361589 364315 . - 0 ID=cds-WP_001356271.1;Parent=gene-AD12_RS09430;Dbxref=GenBank:WP_001356271.1;Name=WP_001356271.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=AD12_RS09430;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001356271.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 364368 365705 . - . ID=gene-AD12_RS09425;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AD12_RS09425;old_locus_tag=AD12_2807 NZ_JJLK01000068.1 Protein Homology CDS 364368 365705 . - 0 ID=cds-WP_032191520.1;Parent=gene-AD12_RS09425;Dbxref=GenBank:WP_032191520.1;Name=WP_032191520.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AD12_RS09425;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_032191520.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 365702 366202 . - . ID=gene-AD12_RS09420;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AD12_RS09420;old_locus_tag=AD12_2808 NZ_JJLK01000068.1 Protein Homology CDS 365702 366202 . - 0 ID=cds-WP_000545042.1;Parent=gene-AD12_RS09420;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AD12_RS09420;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 366205 368007 . - . ID=gene-AD12_RS09415;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AD12_RS09415;old_locus_tag=AD12_2809 NZ_JJLK01000068.1 Protein Homology CDS 366205 368007 . - 0 ID=cds-WP_000247878.1;Parent=gene-AD12_RS09415;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AD12_RS09415;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 368101 368763 . - . ID=gene-AD12_RS09410;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AD12_RS09410;old_locus_tag=AD12_2810 NZ_JJLK01000068.1 Protein Homology CDS 368101 368763 . - 0 ID=cds-WP_000386733.1;Parent=gene-AD12_RS09410;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AD12_RS09410;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 368779 369222 . - . ID=gene-AD12_RS09405;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AD12_RS09405;old_locus_tag=AD12_2811 NZ_JJLK01000068.1 Protein Homology CDS 368779 369222 . - 0 ID=cds-WP_000062997.1;Parent=gene-AD12_RS09405;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AD12_RS09405;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 369853 370791 . - . ID=gene-AD12_RS09400;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AD12_RS09400;old_locus_tag=AD12_2812 NZ_JJLK01000068.1 Protein Homology CDS 369853 370791 . - 0 ID=cds-WP_000622286.1;Parent=gene-AD12_RS09400;Dbxref=GenBank:WP_000622286.1;Name=WP_000622286.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AD12_RS09400;product=transcriptional regulator LrhA;protein_id=WP_000622286.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 371711 372928 . + . ID=gene-AD12_RS09395;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AD12_RS09395;old_locus_tag=AD12_2813 NZ_JJLK01000068.1 Protein Homology CDS 371711 372928 . + 0 ID=cds-WP_000074527.1;Parent=gene-AD12_RS09395;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AD12_RS09395;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 373012 373611 . + . ID=gene-AD12_RS09390;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AD12_RS09390;old_locus_tag=AD12_2814 NZ_JJLK01000068.1 Protein Homology CDS 373012 373611 . + 0 ID=cds-WP_000813876.1;Parent=gene-AD12_RS09390;Dbxref=GenBank:WP_000813876.1;Name=WP_000813876.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311202.1;locus_tag=AD12_RS09390;product=5'-deoxynucleotidase;protein_id=WP_000813876.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 373670 375502 . - . ID=gene-AD12_RS09385;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AD12_RS09385;old_locus_tag=AD12_2815 NZ_JJLK01000068.1 Protein Homology CDS 373670 375502 . - 0 ID=cds-WP_001012899.1;Parent=gene-AD12_RS09385;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AD12_RS09385;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 375589 376239 . - . ID=gene-AD12_RS09380;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AD12_RS09380;old_locus_tag=AD12_2816 NZ_JJLK01000068.1 Protein Homology CDS 375589 376239 . - 0 ID=cds-WP_001203405.1;Parent=gene-AD12_RS09380;Dbxref=GenBank:WP_001203405.1;Name=WP_001203405.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311204.1;locus_tag=AD12_RS09380;product=hexitol phosphatase HxpA;protein_id=WP_001203405.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 376250 376744 . - . ID=gene-AD12_RS09375;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AD12_RS09375;old_locus_tag=AD12_2817 NZ_JJLK01000068.1 Protein Homology CDS 376250 376744 . - 0 ID=cds-WP_001526088.1;Parent=gene-AD12_RS09375;Dbxref=GenBank:WP_001526088.1;Name=WP_001526088.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AD12_RS09375;product=YfbU family protein;protein_id=WP_001526088.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 376827 377282 . - . ID=gene-AD12_RS09370;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AD12_RS09370;old_locus_tag=AD12_2818 NZ_JJLK01000068.1 Protein Homology CDS 376827 377282 . - 0 ID=cds-WP_000106627.1;Parent=gene-AD12_RS09370;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AD12_RS09370;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 377620 378822 . + . ID=gene-AD12_RS09360;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AD12_RS09360;old_locus_tag=AD12_2820 NZ_JJLK01000068.1 Protein Homology CDS 377620 378822 . + 0 ID=cds-WP_001399155.1;Parent=gene-AD12_RS09360;Dbxref=GenBank:WP_001399155.1;Name=WP_001399155.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AD12_RS09360;product=acetate kinase;protein_id=WP_001399155.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 378897 381041 . + . ID=gene-AD12_RS09355;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD12_RS09355;old_locus_tag=AD12_2821 NZ_JJLK01000068.1 Protein Homology CDS 378897 381041 . + 0 ID=cds-WP_000086722.1;Parent=gene-AD12_RS09355;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AD12_RS09355;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 381231 382751 . + . ID=gene-AD12_RS09350;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AD12_RS09350;old_locus_tag=AD12_2822 NZ_JJLK01000068.1 Protein Homology CDS 381231 382751 . + 0 ID=cds-WP_001274493.1;Parent=gene-AD12_RS09350;Dbxref=GenBank:WP_001274493.1;Name=WP_001274493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AD12_RS09350;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274493.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 382784 383326 . - . ID=gene-AD12_RS09345;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AD12_RS09345;old_locus_tag=AD12_2823 NZ_JJLK01000068.1 Protein Homology CDS 382784 383326 . - 0 ID=cds-WP_000437935.1;Parent=gene-AD12_RS09345;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AD12_RS09345;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 383384 383935 . - . ID=gene-AD12_RS09340;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AD12_RS09340;old_locus_tag=AD12_2824 NZ_JJLK01000068.1 Protein Homology CDS 383384 383935 . - 0 ID=cds-WP_000772452.1;Parent=gene-AD12_RS09340;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AD12_RS09340;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 383991 384635 . - . ID=gene-AD12_RS09335;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AD12_RS09335;old_locus_tag=AD12_2825 NZ_JJLK01000068.1 Protein Homology CDS 383991 384635 . - 0 ID=cds-WP_000042440.1;Parent=gene-AD12_RS09335;Dbxref=GenBank:WP_000042440.1;Name=WP_000042440.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708183.1;locus_tag=AD12_RS09335;product=glutathione transferase;protein_id=WP_000042440.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 384771 385418 . + . ID=gene-AD12_RS09330;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AD12_RS09330;old_locus_tag=AD12_2826 NZ_JJLK01000068.1 Protein Homology CDS 384771 385418 . + 0 ID=cds-WP_000566471.1;Parent=gene-AD12_RS09330;Dbxref=GenBank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AD12_RS09330;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 385475 385837 . + . ID=gene-AD12_RS09325;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AD12_RS09325;old_locus_tag=AD12_2827 NZ_JJLK01000068.1 Protein Homology CDS 385475 385837 . + 0 ID=cds-WP_001394545.1;Parent=gene-AD12_RS09325;Dbxref=GenBank:WP_001394545.1;Name=WP_001394545.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AD12_RS09325;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_001394545.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 385858 386751 . + . ID=gene-AD12_RS09320;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AD12_RS09320;old_locus_tag=AD12_2828 NZ_JJLK01000068.1 Protein Homology CDS 385858 386751 . + 0 ID=cds-WP_032286609.1;Parent=gene-AD12_RS09320;Dbxref=GenBank:WP_032286609.1;Name=WP_032286609.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AD12_RS09320;product=TIGR01777 family oxidoreductase;protein_id=WP_032286609.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 386799 387689 . - . ID=gene-AD12_RS09315;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AD12_RS09315;old_locus_tag=AD12_2829 NZ_JJLK01000068.1 Protein Homology CDS 386799 387689 . - 0 ID=cds-WP_000156114.1;Parent=gene-AD12_RS09315;Dbxref=GenBank:WP_000156114.1;Name=WP_000156114.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AD12_RS09315;product=recombination-promoting nuclease RpnB;protein_id=WP_000156114.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 387886 388659 . - . ID=gene-AD12_RS09310;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AD12_RS09310;old_locus_tag=AD12_2830 NZ_JJLK01000068.1 Protein Homology CDS 387886 388659 . - 0 ID=cds-WP_001293623.1;Parent=gene-AD12_RS09310;Dbxref=GenBank:WP_001293623.1;Name=WP_001293623.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=AD12_RS09310;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293623.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 388667 389383 . - . ID=gene-AD12_RS09305;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AD12_RS09305;old_locus_tag=AD12_2831 NZ_JJLK01000068.1 Protein Homology CDS 388667 389383 . - 0 ID=cds-WP_000569958.1;Parent=gene-AD12_RS09305;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AD12_RS09305;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 389380 390066 . - . ID=gene-AD12_RS09300;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AD12_RS09300;old_locus_tag=AD12_2832 NZ_JJLK01000068.1 Protein Homology CDS 389380 390066 . - 0 ID=cds-WP_000965518.1;Parent=gene-AD12_RS09300;Dbxref=GenBank:WP_000965518.1;Name=WP_000965518.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AD12_RS09300;product=histidine ABC transporter permease HisQ;protein_id=WP_000965518.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 390156 390938 . - . ID=gene-AD12_RS09295;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AD12_RS09295;old_locus_tag=AD12_2833 NZ_JJLK01000068.1 Protein Homology CDS 390156 390938 . - 0 ID=cds-WP_000737621.1;Parent=gene-AD12_RS09295;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AD12_RS09295;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 391159 391941 . - . ID=gene-AD12_RS09290;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AD12_RS09290;old_locus_tag=AD12_2834 NZ_JJLK01000068.1 Protein Homology CDS 391159 391941 . - 0 ID=cds-WP_000748261.1;Parent=gene-AD12_RS09290;Dbxref=GenBank:WP_000748261.1;Name=WP_000748261.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311221.1;locus_tag=AD12_RS09290;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748261.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 392207 392776 . - . ID=gene-AD12_RS09285;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AD12_RS09285;old_locus_tag=AD12_2835 NZ_JJLK01000068.1 Protein Homology CDS 392207 392776 . - 0 ID=cds-WP_000825700.1;Parent=gene-AD12_RS09285;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AD12_RS09285;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 392871 394388 . - . ID=gene-AD12_RS09280;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AD12_RS09280;old_locus_tag=AD12_2836 NZ_JJLK01000068.1 Protein Homology CDS 392871 394388 . - 0 ID=cds-WP_000334220.1;Parent=gene-AD12_RS09280;Dbxref=GenBank:WP_000334220.1;Name=WP_000334220.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AD12_RS09280;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 394425 394913 . - . ID=gene-AD12_RS09275;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AD12_RS09275;old_locus_tag=AD12_2837 NZ_JJLK01000068.1 Protein Homology CDS 394425 394913 . - 0 ID=cds-WP_000262113.1;Parent=gene-AD12_RS09275;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AD12_RS09275;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 395172 395834 . - . ID=gene-AD12_RS09270;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AD12_RS09270;old_locus_tag=AD12_2838 NZ_JJLK01000068.1 Protein Homology CDS 395172 395834 . - 0 ID=cds-WP_000146992.1;Parent=gene-AD12_RS09270;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AD12_RS09270;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 395824 397092 . - . ID=gene-AD12_RS09265;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AD12_RS09265;old_locus_tag=AD12_2839 NZ_JJLK01000068.1 Protein Homology CDS 395824 397092 . - 0 ID=cds-WP_000584571.1;Parent=gene-AD12_RS09265;Dbxref=GenBank:WP_000584571.1;Name=WP_000584571.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AD12_RS09265;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584571.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 397162 398076 . - . ID=gene-AD12_RS09260;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AD12_RS09260;old_locus_tag=AD12_2840 NZ_JJLK01000068.1 Protein Homology CDS 397162 398076 . - 0 ID=cds-WP_000118404.1;Parent=gene-AD12_RS09260;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AD12_RS09260;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 398232 398891 . - . ID=gene-AD12_RS09255;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AD12_RS09255;old_locus_tag=AD12_2841 NZ_JJLK01000068.1 Protein Homology CDS 398232 398891 . - 0 ID=cds-WP_000364331.1;Parent=gene-AD12_RS09255;Dbxref=GenBank:WP_000364331.1;Name=WP_000364331.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AD12_RS09255;product=DedA family protein;protein_id=WP_000364331.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 398974 399786 . - . ID=gene-AD12_RS09250;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AD12_RS09250;old_locus_tag=AD12_2842 NZ_JJLK01000068.1 Protein Homology CDS 398974 399786 . - 0 ID=cds-WP_032286611.1;Parent=gene-AD12_RS09250;Dbxref=GenBank:WP_032286611.1;Name=WP_032286611.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AD12_RS09250;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_032286611.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 399786 400799 . - . ID=gene-AD12_RS09245;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AD12_RS09245;old_locus_tag=AD12_2843 NZ_JJLK01000068.1 Protein Homology CDS 399786 400799 . - 0 ID=cds-WP_001289162.1;Parent=gene-AD12_RS09245;Dbxref=GenBank:WP_001289162.1;Name=WP_001289162.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AD12_RS09245;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289162.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 400865 402001 . - . ID=gene-AD12_RS09240;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AD12_RS09240;old_locus_tag=AD12_2844 NZ_JJLK01000068.1 Protein Homology CDS 400865 402001 . - 0 ID=cds-WP_000699121.1;Parent=gene-AD12_RS09240;Dbxref=GenBank:WP_000699121.1;Name=WP_000699121.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708202.1;locus_tag=AD12_RS09240;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699121.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 402100 403095 . + . ID=gene-AD12_RS09235;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AD12_RS09235;old_locus_tag=AD12_2845 NZ_JJLK01000068.1 Protein Homology CDS 402100 403095 . + 0 ID=cds-WP_000615813.1;Parent=gene-AD12_RS09235;Dbxref=GenBank:WP_000615813.1;Name=WP_000615813.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708203.1;locus_tag=AD12_RS09235;product=flagella biosynthesis regulator Flk;protein_id=WP_000615813.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 403092 404270 . - . ID=gene-AD12_RS09230;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AD12_RS09230;old_locus_tag=AD12_2846 NZ_JJLK01000068.1 Protein Homology CDS 403092 404270 . - 0 ID=cds-WP_000127757.1;Parent=gene-AD12_RS09230;Dbxref=GenBank:WP_000127757.1;Name=WP_000127757.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AD12_RS09230;product=arabinose transporter;protein_id=WP_000127757.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 404554 405774 . - . ID=gene-AD12_RS09225;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AD12_RS09225;old_locus_tag=AD12_2847 NZ_JJLK01000068.1 Protein Homology CDS 404554 405774 . - 0 ID=cds-WP_000817183.1;Parent=gene-AD12_RS09225;Dbxref=GenBank:WP_000817183.1;Name=WP_000817183.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311234.1;locus_tag=AD12_RS09225;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817183.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 405933 407939 . + . ID=gene-AD12_RS09220;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AD12_RS09220;old_locus_tag=AD12_2848 NZ_JJLK01000068.1 Protein Homology CDS 405933 407939 . + 0 ID=cds-WP_032286614.1;Parent=gene-AD12_RS09220;Dbxref=GenBank:WP_032286614.1;Name=WP_032286614.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AD12_RS09220;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_032286614.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 408060 408338 . - . ID=gene-AD12_RS09215;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AD12_RS09215;old_locus_tag=AD12_2849 NZ_JJLK01000068.1 Protein Homology CDS 408060 408338 . - 0 ID=cds-WP_000559764.1;Parent=gene-AD12_RS09215;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AD12_RS09215;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 408372 408920 . - . ID=gene-AD12_RS09210;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AD12_RS09210;old_locus_tag=AD12_2850 NZ_JJLK01000068.1 Protein Homology CDS 408372 408920 . - 0 ID=cds-WP_001374345.1;Parent=gene-AD12_RS09210;Dbxref=GenBank:WP_001374345.1;Name=WP_001374345.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AD12_RS09210;product=elongation factor P hydroxylase;protein_id=WP_001374345.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 408920 409729 . - . ID=gene-AD12_RS09205;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AD12_RS09205;old_locus_tag=AD12_2851 NZ_JJLK01000068.1 Protein Homology CDS 408920 409729 . - 0 ID=cds-WP_000447361.1;Parent=gene-AD12_RS09205;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AD12_RS09205;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 409729 410553 . - . ID=gene-AD12_RS09200;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AD12_RS09200;old_locus_tag=AD12_2852 NZ_JJLK01000068.1 Protein Homology CDS 409729 410553 . - 0 ID=cds-WP_032286615.1;Parent=gene-AD12_RS09200;Dbxref=GenBank:WP_032286615.1;Name=WP_032286615.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AD12_RS09200;product=penicillin-insensitive murein endopeptidase;protein_id=WP_032286615.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 410557 411642 . - . ID=gene-AD12_RS09195;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AD12_RS09195;old_locus_tag=AD12_2853 NZ_JJLK01000068.1 Protein Homology CDS 410557 411642 . - 0 ID=cds-WP_000918470.1;Parent=gene-AD12_RS09195;Dbxref=GenBank:WP_000918470.1;Name=WP_000918470.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AD12_RS09195;product=chorismate synthase;protein_id=WP_000918470.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 411677 412609 . - . ID=gene-AD12_RS09190;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AD12_RS09190;old_locus_tag=AD12_2854 NZ_JJLK01000068.1 Protein Homology CDS 411677 412609 . - 0 ID=cds-WP_001295704.1;Parent=gene-AD12_RS09190;Dbxref=GenBank:WP_001295704.1;Name=WP_001295704.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AD12_RS09190;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001295704.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 412775 413326 . + . ID=gene-AD12_RS09185;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AD12_RS09185;old_locus_tag=AD12_2855 NZ_JJLK01000068.1 Protein Homology CDS 412775 413326 . + 0 ID=cds-WP_000730806.1;Parent=gene-AD12_RS09185;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AD12_RS09185;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 413448 414320 . - . ID=gene-AD12_RS09180;Name=AD12_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09180;old_locus_tag=AD12_2856 NZ_JJLK01000068.1 Protein Homology CDS 413448 414320 . - 0 ID=cds-WP_001356216.1;Parent=gene-AD12_RS09180;Dbxref=GenBank:WP_001356216.1;Name=WP_001356216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397279.1;locus_tag=AD12_RS09180;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_001356216.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 414307 414831 . - . ID=gene-AD12_RS09175;Name=AD12_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09175;old_locus_tag=AD12_2857 NZ_JJLK01000068.1 Protein Homology CDS 414307 414831 . - 0 ID=cds-WP_000730291.1;Parent=gene-AD12_RS09175;Dbxref=GenBank:WP_000730291.1;Name=WP_000730291.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708215.1;locus_tag=AD12_RS09175;product=fimbrial protein;protein_id=WP_000730291.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 414828 415298 . - . ID=gene-AD12_RS0124370;Name=AD12_RS0124370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124370;old_locus_tag=AD12_2858 NZ_JJLK01000068.1 Protein Homology CDS 414828 415298 . - 0 ID=cds-WP_000822649.1;Parent=gene-AD12_RS0124370;Dbxref=GenBank:WP_000822649.1;Name=WP_000822649.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708216.1;locus_tag=AD12_RS0124370;product=fimbrial protein;protein_id=WP_000822649.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 415295 415843 . - . ID=gene-AD12_RS0124375;Name=AD12_RS0124375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124375 NZ_JJLK01000068.1 Protein Homology CDS 415295 415843 . - 0 ID=cds-WP_000842082.1;Parent=gene-AD12_RS0124375;Dbxref=GenBank:WP_000842082.1;Name=WP_000842082.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708217.1;locus_tag=AD12_RS0124375;product=fimbrial protein;protein_id=WP_000842082.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 415818 416570 . - . ID=gene-AD12_RS09170;Name=yfcS;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;locus_tag=AD12_RS09170;old_locus_tag=AD12_2861 NZ_JJLK01000068.1 Protein Homology CDS 415818 416570 . - 0 ID=cds-WP_001281615.1;Parent=gene-AD12_RS09170;Dbxref=GenBank:WP_001281615.1;Name=WP_001281615.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yfcS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AD12_RS09170;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001281615.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 416590 419235 . - . ID=gene-AD12_RS09165;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AD12_RS09165;old_locus_tag=AD12_2862 NZ_JJLK01000068.1 Protein Homology CDS 416590 419235 . - 0 ID=cds-WP_032286616.1;Parent=gene-AD12_RS09165;Dbxref=GenBank:WP_032286616.1;Name=WP_032286616.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AD12_RS09165;product=fimbrial usher protein YfcU;protein_id=WP_032286616.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 419317 419880 . - . ID=gene-AD12_RS09160;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AD12_RS09160;old_locus_tag=AD12_2863 NZ_JJLK01000068.1 Protein Homology CDS 419317 419880 . - 0 ID=cds-WP_000033328.1;Parent=gene-AD12_RS09160;Dbxref=GenBank:WP_000033328.1;Name=WP_000033328.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708219.1;locus_tag=AD12_RS09160;product=fimbrial protein;protein_id=WP_000033328.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 420564 421049 . - . ID=gene-AD12_RS09155;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AD12_RS09155;old_locus_tag=AD12_2864 NZ_JJLK01000068.1 Protein Homology CDS 420564 421049 . - 0 ID=cds-WP_001195819.1;Parent=gene-AD12_RS09155;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AD12_RS09155;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 421252 423396 . - . ID=gene-AD12_RS09150;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AD12_RS09150;old_locus_tag=AD12_2865 NZ_JJLK01000068.1 Protein Homology CDS 421252 423396 . - 0 ID=cds-WP_000426150.1;Parent=gene-AD12_RS09150;Dbxref=GenBank:WP_000426150.1;Name=WP_000426150.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311251.1;locus_tag=AD12_RS09150;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426150.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 423396 424706 . - . ID=gene-AD12_RS09145;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AD12_RS09145;old_locus_tag=AD12_2866 NZ_JJLK01000068.1 Protein Homology CDS 423396 424706 . - 0 ID=cds-WP_000531917.1;Parent=gene-AD12_RS09145;Dbxref=GenBank:WP_000531917.1;Name=WP_000531917.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AD12_RS09145;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_000531917.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 424887 425171 . - . ID=gene-AD12_RS09140;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AD12_RS09140;old_locus_tag=AD12_2867 NZ_JJLK01000068.1 Protein Homology CDS 424887 425171 . - 0 ID=cds-WP_001296869.1;Parent=gene-AD12_RS09140;Dbxref=GenBank:WP_001296869.1;Name=WP_001296869.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AD12_RS09140;product=YfcZ/YiiS family protein;protein_id=WP_001296869.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 425543 426883 . + . ID=gene-AD12_RS09135;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AD12_RS09135;old_locus_tag=AD12_2868 NZ_JJLK01000068.1 Protein Homology CDS 425543 426883 . + 0 ID=cds-WP_001296861.1;Parent=gene-AD12_RS09135;Dbxref=GenBank:WP_001296861.1;Name=WP_001296861.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708225.2;locus_tag=AD12_RS09135;product=long-chain fatty acid transporter FadL;protein_id=WP_001296861.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 427251 428309 . + . ID=gene-AD12_RS09130;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AD12_RS09130;old_locus_tag=AD12_2869 NZ_JJLK01000068.1 Protein Homology CDS 427251 428309 . + 0 ID=cds-WP_000937830.1;Parent=gene-AD12_RS09130;Dbxref=GenBank:WP_000937830.1;Name=WP_000937830.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AD12_RS09130;product=protein YfdF;protein_id=WP_000937830.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 428491 429246 . - . ID=gene-AD12_RS09125;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AD12_RS09125;old_locus_tag=AD12_2870 NZ_JJLK01000068.1 Protein Homology CDS 428491 429246 . - 0 ID=cds-WP_000776768.1;Parent=gene-AD12_RS09125;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AD12_RS09125;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 429541 430473 . + . ID=gene-AD12_RS09120;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AD12_RS09120;old_locus_tag=AD12_2872 NZ_JJLK01000068.1 Protein Homology CDS 429541 430473 . + 0 ID=cds-WP_000368131.1;Parent=gene-AD12_RS09120;Dbxref=GenBank:WP_000368131.1;Name=WP_000368131.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311257.1;locus_tag=AD12_RS09120;product=formate/nitrite transporter family protein;protein_id=WP_000368131.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 430549 430623 . + . ID=gene-AD12_RS09115;Name=AD12_RS09115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS09115;old_locus_tag=AD12_2873 NZ_JJLK01000068.1 tRNAscan-SE tRNA 430549 430623 . + . ID=rna-AD12_RS09115;Parent=gene-AD12_RS09115;anticodon=(pos:430582..430584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS09115;product=tRNA-Arg NZ_JJLK01000068.1 tRNAscan-SE exon 430549 430623 . + . ID=exon-AD12_RS09115-1;Parent=rna-AD12_RS09115;anticodon=(pos:430582..430584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS09115;product=tRNA-Arg NZ_JJLK01000068.1 RefSeq gene 431065 432312 . - . ID=gene-AD12_RS09110;Name=AD12_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09110;old_locus_tag=AD12_2874 NZ_JJLK01000068.1 Protein Homology CDS 431065 432312 . - 0 ID=cds-WP_001197016.1;Parent=gene-AD12_RS09110;Dbxref=GenBank:WP_001197016.1;Name=WP_001197016.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311268.1;locus_tag=AD12_RS09110;product=oligosaccharide MFS transporter;protein_id=WP_001197016.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 432384 433298 . - . ID=gene-AD12_RS09105;Name=AD12_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09105;old_locus_tag=AD12_2875 NZ_JJLK01000068.1 Protein Homology CDS 432384 433298 . - 0 ID=cds-WP_001274875.1;Parent=gene-AD12_RS09105;Dbxref=GenBank:WP_001274875.1;Name=WP_001274875.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311269.1;locus_tag=AD12_RS09105;product=aminoimidazole riboside kinase;protein_id=WP_001274875.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 433514 434947 . + . ID=gene-AD12_RS09100;Name=cscA;gbkey=Gene;gene=cscA;gene_biotype=protein_coding;locus_tag=AD12_RS09100;old_locus_tag=AD12_2876 NZ_JJLK01000068.1 Protein Homology CDS 433514 434947 . + 0 ID=cds-WP_000194515.1;Parent=gene-AD12_RS09100;Dbxref=GenBank:WP_000194515.1;Name=WP_000194515.1;gbkey=CDS;gene=cscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708234.2;locus_tag=AD12_RS09100;product=sucrose-6-phosphate hydrolase;protein_id=WP_000194515.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 434955 435950 . - . ID=gene-AD12_RS09095;Name=AD12_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS09095;old_locus_tag=AD12_2877 NZ_JJLK01000068.1 Protein Homology CDS 434955 435950 . - 0 ID=cds-WP_001315771.1;Parent=gene-AD12_RS09095;Dbxref=GenBank:WP_001315771.1;Name=WP_001315771.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005088955.1;locus_tag=AD12_RS09095;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001315771.1;transl_table=11 NZ_JJLK01000068.1 RefSeq pseudogene 436193 436411 . + . ID=gene-AD12_RS09090;Name=AD12_RS09090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS09090;old_locus_tag=AD12_2878;partial=true;pseudo=true;start_range=.,436193 NZ_JJLK01000068.1 Protein Homology CDS 436193 436411 . + 0 ID=cds-AD12_RS09090;Parent=gene-AD12_RS09090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AD12_RS09090;partial=true;product=D-serine transporter DsdX;pseudo=true;start_range=.,436193;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 436429 437757 . + . ID=gene-AD12_RS09085;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AD12_RS09085;old_locus_tag=AD12_2879 NZ_JJLK01000068.1 Protein Homology CDS 436429 437757 . + 0 ID=cds-WP_032286617.1;Parent=gene-AD12_RS09085;Dbxref=GenBank:WP_032286617.1;Name=WP_032286617.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AD12_RS09085;product=D-serine ammonia-lyase;protein_id=WP_032286617.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 437865 439403 . - . ID=gene-AD12_RS09080;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AD12_RS09080;old_locus_tag=AD12_2880 NZ_JJLK01000068.1 Protein Homology CDS 437865 439403 . - 0 ID=cds-WP_001018713.1;Parent=gene-AD12_RS09080;Dbxref=GenBank:WP_001018713.1;Name=WP_001018713.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AD12_RS09080;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018713.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 439403 440566 . - . ID=gene-AD12_RS09075;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AD12_RS09075;old_locus_tag=AD12_2881 NZ_JJLK01000068.1 Protein Homology CDS 439403 440566 . - 0 ID=cds-WP_000435166.1;Parent=gene-AD12_RS09075;Dbxref=GenBank:WP_000435166.1;Name=WP_000435166.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587635.1;locus_tag=AD12_RS09075;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435166.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 440982 441596 . + . ID=gene-AD12_RS09070;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AD12_RS09070;old_locus_tag=AD12_2882 NZ_JJLK01000068.1 Protein Homology CDS 440982 441596 . + 0 ID=cds-WP_000991370.1;Parent=gene-AD12_RS09070;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AD12_RS09070;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 441601 445194 . + . ID=gene-AD12_RS09065;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AD12_RS09065;old_locus_tag=AD12_2883 NZ_JJLK01000068.1 Protein Homology CDS 441601 445194 . + 0 ID=cds-WP_001348569.1;Parent=gene-AD12_RS09065;Dbxref=GenBank:WP_001348569.1;Name=WP_001348569.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708241.1;locus_tag=AD12_RS09065;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001348569.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 445250 446395 . - . ID=gene-AD12_RS09060;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AD12_RS09060;old_locus_tag=AD12_2884 NZ_JJLK01000068.1 Protein Homology CDS 445250 446395 . - 0 ID=cds-WP_001296867.1;Parent=gene-AD12_RS09060;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AD12_RS09060;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 446469 447413 . - . ID=gene-AD12_RS09055;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AD12_RS09055;old_locus_tag=AD12_2885 NZ_JJLK01000068.1 Protein Homology CDS 446469 447413 . - 0 ID=cds-WP_000955028.1;Parent=gene-AD12_RS09055;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AD12_RS09055;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 447483 449177 . - . ID=gene-AD12_RS09050;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AD12_RS09050;old_locus_tag=AD12_2886 NZ_JJLK01000068.1 Protein Homology CDS 447483 449177 . - 0 ID=cds-WP_001283499.1;Parent=gene-AD12_RS09050;Dbxref=GenBank:WP_001283499.1;Name=WP_001283499.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AD12_RS09050;product=oxalyl-CoA decarboxylase;protein_id=WP_001283499.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 449231 450481 . - . ID=gene-AD12_RS09045;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AD12_RS09045;old_locus_tag=AD12_2887 NZ_JJLK01000068.1 Protein Homology CDS 449231 450481 . - 0 ID=cds-WP_000106759.1;Parent=gene-AD12_RS09045;Dbxref=GenBank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AD12_RS09045;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 450994 451626 . - . ID=gene-AD12_RS09040;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AD12_RS09040;old_locus_tag=AD12_2888 NZ_JJLK01000068.1 Protein Homology CDS 450994 451626 . - 0 ID=cds-WP_000825604.1;Parent=gene-AD12_RS09040;Dbxref=GenBank:WP_000825604.1;Name=WP_000825604.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708246.1;locus_tag=AD12_RS09040;product=YfdX family protein;protein_id=WP_000825604.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 451922 452197 . + . ID=gene-AD12_RS0124385;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AD12_RS0124385 NZ_JJLK01000068.1 Protein Homology CDS 451922 452197 . + 0 ID=cds-WP_000867637.1;Parent=gene-AD12_RS0124385;Dbxref=GenBank:WP_000867637.1;Name=WP_000867637.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439267.1;locus_tag=AD12_RS0124385;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867637.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 452274 452516 . - . ID=gene-AD12_RS09035;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AD12_RS09035;old_locus_tag=AD12_2890 NZ_JJLK01000068.1 Protein Homology CDS 452274 452516 . - 0 ID=cds-WP_000639883.1;Parent=gene-AD12_RS09035;Dbxref=GenBank:WP_000639883.1;Name=WP_000639883.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708247.1;locus_tag=AD12_RS09035;product=YfdY family protein;protein_id=WP_000639883.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 452869 453789 . + . ID=gene-AD12_RS09030;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AD12_RS09030;old_locus_tag=AD12_2891 NZ_JJLK01000068.1 Protein Homology CDS 452869 453789 . + 0 ID=cds-WP_000484404.1;Parent=gene-AD12_RS09030;Dbxref=GenBank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AD12_RS09030;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 454145 454216 . + . ID=gene-AD12_RS28125;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AD12_RS28125 NZ_JJLK01000068.1 Protein Homology CDS 454145 454216 . + 0 ID=cds-WP_010723117.1;Parent=gene-AD12_RS28125;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AD12_RS28125;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 454281 455519 . - . ID=gene-AD12_RS09025;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AD12_RS09025;old_locus_tag=AD12_2893 NZ_JJLK01000068.1 Protein Homology CDS 454281 455519 . - 0 ID=cds-WP_000785931.1;Parent=gene-AD12_RS09025;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AD12_RS09025;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 455896 457593 . + . ID=gene-AD12_RS09020;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AD12_RS09020;old_locus_tag=AD12_2895 NZ_JJLK01000068.1 Protein Homology CDS 455896 457593 . + 0 ID=cds-WP_000544359.1;Parent=gene-AD12_RS09020;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AD12_RS09020;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 457608 458342 . + . ID=gene-AD12_RS09015;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AD12_RS09015;old_locus_tag=AD12_2896 NZ_JJLK01000068.1 Protein Homology CDS 457608 458342 . + 0 ID=cds-WP_001295458.1;Parent=gene-AD12_RS09015;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AD12_RS09015;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 458355 459212 . + . ID=gene-AD12_RS09010;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AD12_RS09010;old_locus_tag=AD12_2897 NZ_JJLK01000068.1 Protein Homology CDS 458355 459212 . + 0 ID=cds-WP_000646844.1;Parent=gene-AD12_RS09010;Dbxref=GenBank:WP_000646844.1;Name=WP_000646844.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311289.1;locus_tag=AD12_RS09010;product=AraC family transcriptional regulator;protein_id=WP_000646844.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 459215 461710 . - . ID=gene-AD12_RS09005;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD12_RS09005;old_locus_tag=AD12_2898 NZ_JJLK01000068.1 Protein Homology CDS 459215 461710 . - 0 ID=cds-WP_032286618.1;Parent=gene-AD12_RS09005;Dbxref=GenBank:WP_032286618.1;Name=WP_032286618.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708251.1;locus_tag=AD12_RS09005;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032286618.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 461735 462772 . - . ID=gene-AD12_RS09000;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AD12_RS09000;old_locus_tag=AD12_2899 NZ_JJLK01000068.1 Protein Homology CDS 461735 462772 . - 0 ID=cds-WP_000366023.1;Parent=gene-AD12_RS09000;Dbxref=GenBank:WP_000366023.1;Name=WP_000366023.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311291.1;locus_tag=AD12_RS09000;product=aminopeptidase;protein_id=WP_000366023.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 462772 463857 . - . ID=gene-AD12_RS08995;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AD12_RS08995;old_locus_tag=AD12_2900 NZ_JJLK01000068.1 Protein Homology CDS 462772 463857 . - 0 ID=cds-WP_000173244.1;Parent=gene-AD12_RS08995;Dbxref=GenBank:WP_000173244.1;Name=WP_000173244.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AD12_RS08995;product=aminopeptidase;protein_id=WP_000173244.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 463872 465119 . - . ID=gene-AD12_RS08990;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AD12_RS08990;old_locus_tag=AD12_2901 NZ_JJLK01000068.1 Protein Homology CDS 463872 465119 . - 0 ID=cds-WP_000985336.1;Parent=gene-AD12_RS08990;Dbxref=GenBank:WP_000985336.1;Name=WP_000985336.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311293.1;locus_tag=AD12_RS08990;product=PTS fructose transporter subunit IIC;protein_id=WP_000985336.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 465141 465467 . - . ID=gene-AD12_RS08985;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AD12_RS08985;old_locus_tag=AD12_2902 NZ_JJLK01000068.1 Protein Homology CDS 465141 465467 . - 0 ID=cds-WP_000038456.1;Parent=gene-AD12_RS08985;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AD12_RS08985;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 465686 466651 . - . ID=gene-AD12_RS08980;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AD12_RS08980;old_locus_tag=AD12_2903 NZ_JJLK01000068.1 Protein Homology CDS 465686 466651 . - 0 ID=cds-WP_000170352.1;Parent=gene-AD12_RS08980;Dbxref=GenBank:WP_000170352.1;Name=WP_000170352.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AD12_RS08980;product=glucokinase;protein_id=WP_000170352.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 466855 468111 . + . ID=gene-AD12_RS08975;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AD12_RS08975;old_locus_tag=AD12_2904 NZ_JJLK01000068.1 Protein Homology CDS 466855 468111 . + 0 ID=cds-WP_000903152.1;Parent=gene-AD12_RS08975;Dbxref=GenBank:WP_000903152.1;Name=WP_000903152.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AD12_RS08975;product=ion channel protein;protein_id=WP_000903152.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 468226 468552 . + . ID=gene-AD12_RS08970;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AD12_RS08970;old_locus_tag=AD12_2905 NZ_JJLK01000068.1 Protein Homology CDS 468226 468552 . + 0 ID=cds-WP_000490072.1;Parent=gene-AD12_RS08970;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AD12_RS08970;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 468693 469931 . - . ID=gene-AD12_RS08965;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AD12_RS08965;old_locus_tag=AD12_2906 NZ_JJLK01000068.1 Protein Homology CDS 468693 469931 . - 0 ID=cds-WP_000186369.1;Parent=gene-AD12_RS08965;Dbxref=GenBank:WP_000186369.1;Name=WP_000186369.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AD12_RS08965;product=Nramp family divalent metal transporter;protein_id=WP_000186369.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 469912 470001 . - . ID=gene-AD12_RS29910;Name=AD12_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29910 NZ_JJLK01000068.1 Protein Homology CDS 469912 470001 . - 0 ID=cds-WP_240811045.1;Parent=gene-AD12_RS29910;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AD12_RS29910;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 470267 471469 . + . ID=gene-AD12_RS08960;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AD12_RS08960;old_locus_tag=AD12_2907 NZ_JJLK01000068.1 Protein Homology CDS 470267 471469 . + 0 ID=cds-WP_000376337.1;Parent=gene-AD12_RS08960;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AD12_RS08960;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 471519 473708 . - . ID=gene-AD12_RS08955;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=AD12_RS08955;old_locus_tag=AD12_2908 NZ_JJLK01000068.1 Protein Homology CDS 471519 473708 . - 0 ID=cds-WP_032286620.1;Parent=gene-AD12_RS08955;Dbxref=GenBank:WP_032286620.1;Name=WP_032286620.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;gene=pdeA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AD12_RS08955;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_032286620.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 473916 473991 . - . ID=gene-AD12_RS08950;Name=AD12_RS08950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08950;old_locus_tag=AD12_2909 NZ_JJLK01000068.1 tRNAscan-SE tRNA 473916 473991 . - . ID=rna-AD12_RS08950;Parent=gene-AD12_RS08950;anticodon=(pos:complement(473956..473958));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08950;product=tRNA-Ala NZ_JJLK01000068.1 tRNAscan-SE exon 473916 473991 . - . ID=exon-AD12_RS08950-1;Parent=rna-AD12_RS08950;anticodon=(pos:complement(473956..473958));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08950;product=tRNA-Ala NZ_JJLK01000068.1 RefSeq gene 474031 474106 . - . ID=gene-AD12_RS08945;Name=AD12_RS08945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08945;old_locus_tag=AD12_2910 NZ_JJLK01000068.1 tRNAscan-SE tRNA 474031 474106 . - . ID=rna-AD12_RS08945;Parent=gene-AD12_RS08945;anticodon=(pos:complement(474071..474073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08945;product=tRNA-Ala NZ_JJLK01000068.1 tRNAscan-SE exon 474031 474106 . - . ID=exon-AD12_RS08945-1;Parent=rna-AD12_RS08945;anticodon=(pos:complement(474071..474073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08945;product=tRNA-Ala NZ_JJLK01000068.1 RefSeq gene 474327 474686 . + . ID=gene-AD12_RS08940;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AD12_RS08940;old_locus_tag=AD12_2911 NZ_JJLK01000068.1 Protein Homology CDS 474327 474686 . + 0 ID=cds-WP_000472021.1;Parent=gene-AD12_RS08940;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AD12_RS08940;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 474688 475080 . + . ID=gene-AD12_RS08935;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AD12_RS08935;old_locus_tag=AD12_2912 NZ_JJLK01000068.1 Protein Homology CDS 474688 475080 . + 0 ID=cds-WP_000826503.1;Parent=gene-AD12_RS08935;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AD12_RS08935;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 475132 476547 . - . ID=gene-AD12_RS08930;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD12_RS08930;old_locus_tag=AD12_2913 NZ_JJLK01000068.1 Protein Homology CDS 475132 476547 . - 0 ID=cds-WP_000695655.1;Parent=gene-AD12_RS08930;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD12_RS08930;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JJLK01000068.1 RefSeq gene 476806 476881 . + . ID=gene-AD12_RS08925;Name=AD12_RS08925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08925;old_locus_tag=AD12_2915 NZ_JJLK01000068.1 tRNAscan-SE tRNA 476806 476881 . + . ID=rna-AD12_RS08925;Parent=gene-AD12_RS08925;anticodon=(pos:476839..476841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08925;product=tRNA-Val NZ_JJLK01000068.1 tRNAscan-SE exon 476806 476881 . + . ID=exon-AD12_RS08925-1;Parent=rna-AD12_RS08925;anticodon=(pos:476839..476841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08925;product=tRNA-Val NZ_JJLK01000068.1 RefSeq gene 476926 477001 . + . ID=gene-AD12_RS08920;Name=AD12_RS08920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08920;old_locus_tag=AD12_2916 NZ_JJLK01000068.1 tRNAscan-SE tRNA 476926 477001 . + . ID=rna-AD12_RS08920;Parent=gene-AD12_RS08920;anticodon=(pos:476959..476961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08920;product=tRNA-Val NZ_JJLK01000068.1 tRNAscan-SE exon 476926 477001 . + . ID=exon-AD12_RS08920-1;Parent=rna-AD12_RS08920;anticodon=(pos:476959..476961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08920;product=tRNA-Val NZ_JJLK01000068.1 RefSeq gene 477048 477123 . + . ID=gene-AD12_RS08915;Name=AD12_RS08915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08915;old_locus_tag=AD12_2917 NZ_JJLK01000068.1 tRNAscan-SE tRNA 477048 477123 . + . ID=rna-AD12_RS08915;Parent=gene-AD12_RS08915;anticodon=(pos:477081..477083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08915;product=tRNA-Val NZ_JJLK01000068.1 tRNAscan-SE exon 477048 477123 . + . ID=exon-AD12_RS08915-1;Parent=rna-AD12_RS08915;anticodon=(pos:477081..477083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08915;product=tRNA-Val NZ_JJLK01000068.1 RefSeq gene 477128 477203 . + . ID=gene-AD12_RS08910;Name=AD12_RS08910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS08910;old_locus_tag=AD12_2918 NZ_JJLK01000068.1 tRNAscan-SE tRNA 477128 477203 . + . ID=rna-AD12_RS08910;Parent=gene-AD12_RS08910;anticodon=(pos:477161..477163);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08910;product=tRNA-Lys NZ_JJLK01000068.1 tRNAscan-SE exon 477128 477203 . + . ID=exon-AD12_RS08910-1;Parent=rna-AD12_RS08910;anticodon=(pos:477161..477163);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS08910;product=tRNA-Lys NZ_JJLK01000068.1 RefSeq gene 477234 477359 . + . ID=gene-AD12_RS25805;Name=AD12_RS25805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25805 NZ_JJLK01000068.1 cmsearch ncRNA 477234 477359 . + . ID=rna-AD12_RS25805;Parent=gene-AD12_RS25805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25805;product=RtT sRNA NZ_JJLK01000068.1 cmsearch exon 477234 477359 . + . ID=exon-AD12_RS25805-1;Parent=rna-AD12_RS25805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25805;product=RtT sRNA ##sequence-region NZ_JJLK01000069.1 1 133161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000069.1 RefSeq region 1 133161 . + . ID=NZ_JJLK01000069.1:1..133161;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000069.1 RefSeq gene 98 223 . + . ID=gene-AD12_RS25810;Name=AD12_RS25810;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25810 NZ_JJLK01000069.1 cmsearch ncRNA 98 223 . + . ID=rna-AD12_RS25810;Parent=gene-AD12_RS25810;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25810;product=RtT sRNA NZ_JJLK01000069.1 cmsearch exon 98 223 . + . ID=exon-AD12_RS25810-1;Parent=rna-AD12_RS25810;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25810;product=RtT sRNA NZ_JJLK01000069.1 RefSeq gene 332 1216 . - . ID=gene-AD12_RS08905;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AD12_RS08905;old_locus_tag=AD12_2920 NZ_JJLK01000069.1 Protein Homology CDS 332 1216 . - 0 ID=cds-WP_001341600.1;Parent=gene-AD12_RS08905;Dbxref=GenBank:WP_001341600.1;Name=WP_001341600.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AD12_RS08905;product=DNA-binding transcriptional regulator XapR;protein_id=WP_001341600.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 1257 1415 . - . ID=gene-AD12_RS08900;Name=AD12_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08900;old_locus_tag=AD12_2921 NZ_JJLK01000069.1 Protein Homology CDS 1257 1415 . - 0 ID=cds-WP_000651752.1;Parent=gene-AD12_RS08900;Dbxref=GenBank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AD12_RS08900;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 1468 2742 . - . ID=gene-AD12_RS08895;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AD12_RS08895;old_locus_tag=AD12_2922 NZ_JJLK01000069.1 Protein Homology CDS 1468 2742 . - 0 ID=cds-WP_077745035.1;Parent=gene-AD12_RS08895;Dbxref=GenBank:WP_077745035.1;Name=WP_077745035.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234464.1;locus_tag=AD12_RS08895;product=xanthosine/proton symporter XapB;protein_id=WP_077745035.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 2783 3616 . - . ID=gene-AD12_RS08890;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AD12_RS08890;old_locus_tag=AD12_2923 NZ_JJLK01000069.1 Protein Homology CDS 2783 3616 . - 0 ID=cds-WP_000084573.1;Parent=gene-AD12_RS08890;Dbxref=GenBank:WP_000084573.1;Name=WP_000084573.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AD12_RS08890;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 3865 4629 . + . ID=gene-AD12_RS08885;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=AD12_RS08885;old_locus_tag=AD12_2924 NZ_JJLK01000069.1 Protein Homology CDS 3865 4629 . + 0 ID=cds-WP_000716421.1;Parent=gene-AD12_RS08885;Dbxref=GenBank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yfeN;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AD12_RS08885;product=outer membrane protein OmpK;protein_id=WP_000716421.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 4668 5594 . - . ID=gene-AD12_RS08880;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AD12_RS08880;old_locus_tag=AD12_2925 NZ_JJLK01000069.1 Protein Homology CDS 4668 5594 . - 0 ID=cds-WP_001109794.1;Parent=gene-AD12_RS08880;Dbxref=GenBank:WP_001109794.1;Name=WP_001109794.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AD12_RS08880;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 5684 6682 . + . ID=gene-AD12_RS08875;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AD12_RS08875;old_locus_tag=AD12_2926 NZ_JJLK01000069.1 Protein Homology CDS 5684 6682 . + 0 ID=cds-WP_000765605.1;Parent=gene-AD12_RS08875;Dbxref=GenBank:WP_000765605.1;Name=WP_000765605.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=AD12_RS08875;product=bile acid:sodium symporter family protein;protein_id=WP_000765605.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 6679 6897 . - . ID=gene-AD12_RS08870;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AD12_RS08870;old_locus_tag=AD12_2927 NZ_JJLK01000069.1 Protein Homology CDS 6679 6897 . - 0 ID=cds-WP_000410201.1;Parent=gene-AD12_RS08870;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AD12_RS08870;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 6899 8914 . - . ID=gene-AD12_RS08865;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AD12_RS08865;old_locus_tag=AD12_2928 NZ_JJLK01000069.1 Protein Homology CDS 6899 8914 . - 0 ID=cds-WP_000443665.1;Parent=gene-AD12_RS08865;Dbxref=GenBank:WP_000443665.1;Name=WP_000443665.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AD12_RS08865;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443665.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 8985 9971 . - . ID=gene-AD12_RS08860;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AD12_RS08860;old_locus_tag=AD12_2929 NZ_JJLK01000069.1 Protein Homology CDS 8985 9971 . - 0 ID=cds-WP_001471946.1;Parent=gene-AD12_RS08860;Dbxref=GenBank:WP_001471946.1;Name=WP_001471946.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311311.1;locus_tag=AD12_RS08860;product=cell division protein ZipA;protein_id=WP_001471946.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 10201 10962 . + . ID=gene-AD12_RS08855;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AD12_RS08855;old_locus_tag=AD12_2930 NZ_JJLK01000069.1 Protein Homology CDS 10201 10962 . + 0 ID=cds-WP_000254843.1;Parent=gene-AD12_RS08855;Dbxref=GenBank:WP_000254843.1;Name=WP_000254843.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AD12_RS08855;product=sulfate transporter CysZ;protein_id=WP_000254843.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 11147 12118 . + . ID=gene-AD12_RS08850;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AD12_RS08850;old_locus_tag=AD12_2931 NZ_JJLK01000069.1 Protein Homology CDS 11147 12118 . + 0 ID=cds-WP_000034402.1;Parent=gene-AD12_RS08850;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AD12_RS08850;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 12502 12759 . + . ID=gene-AD12_RS08845;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AD12_RS08845;old_locus_tag=AD12_2932 NZ_JJLK01000069.1 Protein Homology CDS 12502 12759 . + 0 ID=cds-WP_000487600.1;Parent=gene-AD12_RS08845;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AD12_RS08845;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 12804 14531 . + . ID=gene-AD12_RS08840;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AD12_RS08840;old_locus_tag=AD12_2933 NZ_JJLK01000069.1 Protein Homology CDS 12804 14531 . + 0 ID=cds-WP_000623136.1;Parent=gene-AD12_RS08840;Dbxref=GenBank:WP_000623136.1;Name=WP_000623136.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311315.1;locus_tag=AD12_RS08840;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623136.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 14572 15081 . + . ID=gene-AD12_RS08835;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AD12_RS08835;old_locus_tag=AD12_2934 NZ_JJLK01000069.1 Protein Homology CDS 14572 15081 . + 0 ID=cds-WP_000522247.1;Parent=gene-AD12_RS08835;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AD12_RS08835;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 15123 15974 . - . ID=gene-AD12_RS08830;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AD12_RS08830;old_locus_tag=AD12_2935 NZ_JJLK01000069.1 Protein Homology CDS 15123 15974 . - 0 ID=cds-WP_000096660.1;Parent=gene-AD12_RS08830;Dbxref=GenBank:WP_000096660.1;Name=WP_000096660.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708273.1;locus_tag=AD12_RS08830;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096660.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 16079 16447 . + . ID=gene-AD12_RS08825;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AD12_RS08825;old_locus_tag=AD12_2936 NZ_JJLK01000069.1 Protein Homology CDS 16079 16447 . + 0 ID=cds-WP_000719943.1;Parent=gene-AD12_RS08825;Dbxref=GenBank:WP_000719943.1;Name=WP_000719943.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592994.1;locus_tag=AD12_RS08825;product=YfeK family protein;protein_id=WP_000719943.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 16450 17361 . - . ID=gene-AD12_RS08820;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AD12_RS08820;old_locus_tag=AD12_2937 NZ_JJLK01000069.1 Protein Homology CDS 16450 17361 . - 0 ID=cds-WP_032286633.1;Parent=gene-AD12_RS08820;Dbxref=GenBank:WP_032286633.1;Name=WP_032286633.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AD12_RS08820;product=cysteine synthase B;protein_id=WP_032286633.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 17495 18592 . - . ID=gene-AD12_RS08815;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AD12_RS08815;old_locus_tag=AD12_2938 NZ_JJLK01000069.1 Protein Homology CDS 17495 18592 . - 0 ID=cds-WP_000021017.1;Parent=gene-AD12_RS08815;Dbxref=GenBank:WP_000021017.1;Name=WP_000021017.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AD12_RS08815;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021017.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 18582 19457 . - . ID=gene-AD12_RS08810;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AD12_RS08810;old_locus_tag=AD12_2939 NZ_JJLK01000069.1 Protein Homology CDS 18582 19457 . - 0 ID=cds-WP_000852686.1;Parent=gene-AD12_RS08810;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AD12_RS08810;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 19457 20290 . - . ID=gene-AD12_RS08805;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AD12_RS08805;old_locus_tag=AD12_2940 NZ_JJLK01000069.1 Protein Homology CDS 19457 20290 . - 0 ID=cds-WP_000458405.1;Parent=gene-AD12_RS08805;Dbxref=GenBank:WP_000458405.1;Name=WP_000458405.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AD12_RS08805;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458405.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 20290 21306 . - . ID=gene-AD12_RS08800;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AD12_RS08800;old_locus_tag=AD12_2941 NZ_JJLK01000069.1 Protein Homology CDS 20290 21306 . - 0 ID=cds-WP_000290223.1;Parent=gene-AD12_RS08800;Dbxref=GenBank:WP_000290223.1;Name=WP_000290223.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=AD12_RS08800;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290223.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 21477 22268 . - . ID=gene-AD12_RS08795;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AD12_RS08795;old_locus_tag=AD12_2942 NZ_JJLK01000069.1 Protein Homology CDS 21477 22268 . - 0 ID=cds-WP_000517431.1;Parent=gene-AD12_RS08795;Dbxref=GenBank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AD12_RS08795;product=SDR family oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 22397 23254 . - . ID=gene-AD12_RS08790;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AD12_RS08790;old_locus_tag=AD12_2943 NZ_JJLK01000069.1 Protein Homology CDS 22397 23254 . - 0 ID=cds-WP_000966468.1;Parent=gene-AD12_RS08790;Dbxref=GenBank:WP_000966468.1;Name=WP_000966468.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AD12_RS08790;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966468.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 23418 24314 . + . ID=gene-AD12_RS08785;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AD12_RS08785;old_locus_tag=AD12_2944 NZ_JJLK01000069.1 Protein Homology CDS 23418 24314 . + 0 ID=cds-WP_001175648.1;Parent=gene-AD12_RS08785;Dbxref=GenBank:WP_001175648.1;Name=WP_001175648.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AD12_RS08785;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001175648.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 24318 25742 . + . ID=gene-AD12_RS08780;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AD12_RS08780;old_locus_tag=AD12_2945 NZ_JJLK01000069.1 Protein Homology CDS 24318 25742 . + 0 ID=cds-WP_032286635.1;Parent=gene-AD12_RS08780;Dbxref=GenBank:WP_032286635.1;Name=WP_032286635.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AD12_RS08780;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_032286635.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 25747 27051 . + . ID=gene-AD12_RS08775;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AD12_RS08775;old_locus_tag=AD12_2946 NZ_JJLK01000069.1 Protein Homology CDS 25747 27051 . + 0 ID=cds-WP_001315775.1;Parent=gene-AD12_RS08775;Dbxref=GenBank:WP_001315775.1;Name=WP_001315775.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311328.1;locus_tag=AD12_RS08775;product=penicillin binding protein PBP4B;protein_id=WP_001315775.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 27109 28008 . - . ID=gene-AD12_RS08770;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AD12_RS08770;old_locus_tag=AD12_2947 NZ_JJLK01000069.1 Protein Homology CDS 27109 28008 . - 0 ID=cds-WP_000084590.1;Parent=gene-AD12_RS08770;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AD12_RS08770;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 28104 28679 . - . ID=gene-AD12_RS0124425;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AD12_RS0124425;old_locus_tag=AD12_2948 NZ_JJLK01000069.1 Protein Homology CDS 28104 28679 . - 0 ID=cds-WP_000838945.1;Parent=gene-AD12_RS0124425;Dbxref=GenBank:WP_000838945.1;Name=WP_000838945.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311330.1;locus_tag=AD12_RS0124425;product=RpoE-regulated lipoprotein;protein_id=WP_000838945.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 28740 29189 . - . ID=gene-AD12_RS0124430;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AD12_RS0124430;old_locus_tag=AD12_2949 NZ_JJLK01000069.1 Protein Homology CDS 28740 29189 . - 0 ID=cds-WP_000842944.1;Parent=gene-AD12_RS0124430;Dbxref=GenBank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AD12_RS0124430;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 29176 29601 . - . ID=gene-AD12_RS08765;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AD12_RS08765;old_locus_tag=AD12_2950 NZ_JJLK01000069.1 Protein Homology CDS 29176 29601 . - 0 ID=cds-WP_000406000.1;Parent=gene-AD12_RS08765;Dbxref=GenBank:WP_000406000.1;Name=WP_000406000.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=AD12_RS08765;product=GNAT family acetyltransferase;protein_id=WP_000406000.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 29815 30684 . + . ID=gene-AD12_RS08760;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AD12_RS08760;old_locus_tag=AD12_2951 NZ_JJLK01000069.1 Protein Homology CDS 29815 30684 . + 0 ID=cds-WP_000102891.1;Parent=gene-AD12_RS08760;Dbxref=GenBank:WP_000102891.1;Name=WP_000102891.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=AD12_RS08760;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102891.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 30688 31587 . + . ID=gene-AD12_RS08755;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AD12_RS08755;old_locus_tag=AD12_2952 NZ_JJLK01000069.1 Protein Homology CDS 30688 31587 . + 0 ID=cds-WP_000801367.1;Parent=gene-AD12_RS08755;Dbxref=GenBank:WP_000801367.1;Name=WP_000801367.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311334.1;locus_tag=AD12_RS08755;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801367.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 31593 32645 . - . ID=gene-AD12_RS08750;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AD12_RS08750;old_locus_tag=AD12_2953 NZ_JJLK01000069.1 Protein Homology CDS 31593 32645 . - 0 ID=cds-WP_000753700.1;Parent=gene-AD12_RS08750;Dbxref=GenBank:WP_000753700.1;Name=WP_000753700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311335.1;locus_tag=AD12_RS08750;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753700.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 32691 33191 . - . ID=gene-AD12_RS08745;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AD12_RS08745;old_locus_tag=AD12_2954 NZ_JJLK01000069.1 Protein Homology CDS 32691 33191 . - 0 ID=cds-WP_000606257.1;Parent=gene-AD12_RS08745;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AD12_RS08745;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 33204 33863 . - . ID=gene-AD12_RS08740;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AD12_RS08740;old_locus_tag=AD12_2955 NZ_JJLK01000069.1 Protein Homology CDS 33204 33863 . - 0 ID=cds-WP_001111038.1;Parent=gene-AD12_RS08740;Dbxref=GenBank:WP_001111038.1;Name=WP_001111038.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708289.1;locus_tag=AD12_RS08740;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111038.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 33873 34760 . - . ID=gene-AD12_RS08735;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AD12_RS08735;old_locus_tag=AD12_2956 NZ_JJLK01000069.1 Protein Homology CDS 33873 34760 . - 0 ID=cds-WP_000372364.1;Parent=gene-AD12_RS08735;Dbxref=GenBank:WP_000372364.1;Name=WP_000372364.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AD12_RS08735;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372364.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 34781 36142 . - . ID=gene-AD12_RS08730;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AD12_RS08730;old_locus_tag=AD12_2957 NZ_JJLK01000069.1 Protein Homology CDS 34781 36142 . - 0 ID=cds-WP_000770004.1;Parent=gene-AD12_RS08730;Dbxref=GenBank:WP_000770004.1;Name=WP_000770004.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AD12_RS08730;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000770004.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 36154 37557 . - . ID=gene-AD12_RS08725;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AD12_RS08725;old_locus_tag=AD12_2958 NZ_JJLK01000069.1 Protein Homology CDS 36154 37557 . - 0 ID=cds-WP_032173509.1;Parent=gene-AD12_RS08725;Dbxref=GenBank:WP_032173509.1;Name=WP_032173509.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311340.1;locus_tag=AD12_RS08725;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_032173509.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 37554 38780 . - . ID=gene-AD12_RS08720;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AD12_RS08720;old_locus_tag=AD12_2959 NZ_JJLK01000069.1 Protein Homology CDS 37554 38780 . - 0 ID=cds-WP_000512372.1;Parent=gene-AD12_RS08720;Dbxref=GenBank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AD12_RS08720;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 38897 40084 . - . ID=gene-AD12_RS08715;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AD12_RS08715;old_locus_tag=AD12_2960 NZ_JJLK01000069.1 Protein Homology CDS 38897 40084 . - 0 ID=cds-WP_032286636.1;Parent=gene-AD12_RS08715;Dbxref=GenBank:WP_032286636.1;Name=WP_032286636.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=AD12_RS08715;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_032286636.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 40074 40910 . - . ID=gene-AD12_RS08710;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AD12_RS08710;old_locus_tag=AD12_2961 NZ_JJLK01000069.1 Protein Homology CDS 40074 40910 . - 0 ID=cds-WP_000929709.1;Parent=gene-AD12_RS08710;Dbxref=GenBank:WP_000929709.1;Name=WP_000929709.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AD12_RS08710;product=ethanolamine utilization protein EutJ;protein_id=WP_000929709.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 40921 42324 . - . ID=gene-AD12_RS08705;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AD12_RS08705;old_locus_tag=AD12_2962 NZ_JJLK01000069.1 Protein Homology CDS 40921 42324 . - 0 ID=cds-WP_032286638.1;Parent=gene-AD12_RS08705;Dbxref=GenBank:WP_032286638.1;Name=WP_032286638.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AD12_RS08705;product=aldehyde dehydrogenase family protein;protein_id=WP_032286638.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 42336 42623 . - . ID=gene-AD12_RS08700;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AD12_RS08700;old_locus_tag=AD12_2963 NZ_JJLK01000069.1 Protein Homology CDS 42336 42623 . - 0 ID=cds-WP_000762196.1;Parent=gene-AD12_RS08700;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AD12_RS08700;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 42730 43023 . - . ID=gene-AD12_RS08695;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AD12_RS08695;old_locus_tag=AD12_2964 NZ_JJLK01000069.1 Protein Homology CDS 42730 43023 . - 0 ID=cds-WP_000387713.1;Parent=gene-AD12_RS08695;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AD12_RS08695;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JJLK01000069.1 RefSeq pseudogene 43062 44078 . - . ID=gene-AD12_RS08690;Name=pta;gbkey=Gene;gene=pta;gene_biotype=pseudogene;locus_tag=AD12_RS08690;old_locus_tag=AD12_2965;pseudo=true NZ_JJLK01000069.1 Protein Homology CDS 43062 44078 . - 0 ID=cds-AD12_RS08690;Parent=gene-AD12_RS08690;Note=internal stop;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AD12_RS08690;product=phosphate acetyltransferase;pseudo=true;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 44075 44878 . - . ID=gene-AD12_RS08680;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AD12_RS08680;old_locus_tag=AD12_2967 NZ_JJLK01000069.1 Protein Homology CDS 44075 44878 . - 0 ID=cds-WP_000651298.1;Parent=gene-AD12_RS08680;Dbxref=GenBank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AD12_RS08680;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 44875 45576 . - . ID=gene-AD12_RS08675;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AD12_RS08675;old_locus_tag=AD12_2968 NZ_JJLK01000069.1 Protein Homology CDS 44875 45576 . - 0 ID=cds-WP_000733903.1;Parent=gene-AD12_RS08675;Dbxref=GenBank:WP_000733903.1;Name=WP_000733903.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AD12_RS08675;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733903.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 45551 46030 . - . ID=gene-AD12_RS08670;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AD12_RS08670;old_locus_tag=AD12_2969 NZ_JJLK01000069.1 Protein Homology CDS 45551 46030 . - 0 ID=cds-WP_000820764.1;Parent=gene-AD12_RS08670;Dbxref=GenBank:WP_000820764.1;Name=WP_000820764.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311350.1;locus_tag=AD12_RS08670;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820764.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 46043 46378 . - . ID=gene-AD12_RS08665;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AD12_RS08665;old_locus_tag=AD12_2970 NZ_JJLK01000069.1 Protein Homology CDS 46043 46378 . - 0 ID=cds-WP_001333989.1;Parent=gene-AD12_RS08665;Dbxref=GenBank:WP_001333989.1;Name=WP_001333989.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AD12_RS08665;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001333989.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 46671 48950 . - . ID=gene-AD12_RS08660;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AD12_RS08660;old_locus_tag=AD12_2971 NZ_JJLK01000069.1 Protein Homology CDS 46671 48950 . - 0 ID=cds-WP_000342642.1;Parent=gene-AD12_RS08660;Dbxref=GenBank:WP_000342642.1;Name=WP_000342642.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708302.1;locus_tag=AD12_RS08660;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342642.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 49239 50189 . + . ID=gene-AD12_RS08655;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD12_RS08655;old_locus_tag=AD12_2972 NZ_JJLK01000069.1 Protein Homology CDS 49239 50189 . + 0 ID=cds-WP_001003709.1;Parent=gene-AD12_RS08655;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AD12_RS08655;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 50209 52212 . + . ID=gene-AD12_RS08650;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD12_RS08650;old_locus_tag=AD12_2973 NZ_JJLK01000069.1 Protein Homology CDS 50209 52212 . + 0 ID=cds-WP_000087298.1;Parent=gene-AD12_RS08650;Dbxref=GenBank:WP_000087298.1;Name=WP_000087298.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311354.1;locus_tag=AD12_RS08650;product=transketolase;protein_id=WP_000087298.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 52308 53351 . - . ID=gene-AD12_RS08645;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AD12_RS08645;old_locus_tag=AD12_2974 NZ_JJLK01000069.1 Protein Homology CDS 52308 53351 . - 0 ID=cds-WP_001270524.1;Parent=gene-AD12_RS08645;Dbxref=GenBank:WP_001270524.1;Name=WP_001270524.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311355.1;locus_tag=AD12_RS08645;product=DUF1176 domain-containing protein;protein_id=WP_001270524.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 53477 54052 . - . ID=gene-AD12_RS08640;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AD12_RS08640;old_locus_tag=AD12_2975 NZ_JJLK01000069.1 Protein Homology CDS 53477 54052 . - 0 ID=cds-WP_000193711.1;Parent=gene-AD12_RS08640;Dbxref=GenBank:WP_000193711.1;Name=WP_000193711.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=AD12_RS08640;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000193711.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 54120 56099 . - . ID=gene-AD12_RS08635;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AD12_RS08635;old_locus_tag=AD12_2976 NZ_JJLK01000069.1 Protein Homology CDS 54120 56099 . - 0 ID=cds-WP_001078870.1;Parent=gene-AD12_RS08635;Dbxref=GenBank:WP_001078870.1;Name=WP_001078870.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AD12_RS08635;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078870.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 56305 58005 . + . ID=gene-AD12_RS08630;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AD12_RS08630;old_locus_tag=AD12_2978 NZ_JJLK01000069.1 Protein Homology CDS 56305 58005 . + 0 ID=cds-WP_000636129.1;Parent=gene-AD12_RS08630;Dbxref=GenBank:WP_000636129.1;Name=WP_000636129.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AD12_RS08630;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000636129.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 58169 61282 . + . ID=gene-AD12_RS08625;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AD12_RS08625;old_locus_tag=AD12_2979 NZ_JJLK01000069.1 Protein Homology CDS 58169 61282 . + 0 ID=cds-WP_001273141.1;Parent=gene-AD12_RS08625;Dbxref=GenBank:WP_001273141.1;Name=WP_001273141.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AD12_RS08625;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273141.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 61381 61440 . - . ID=gene-AD12_RS28135;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AD12_RS28135 NZ_JJLK01000069.1 Protein Homology CDS 61381 61440 . - 0 ID=cds-WP_001386977.1;Parent=gene-AD12_RS28135;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AD12_RS28135;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 61821 62177 . + . ID=gene-AD12_RS08620;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AD12_RS08620;old_locus_tag=AD12_2980 NZ_JJLK01000069.1 Protein Homology CDS 61821 62177 . + 0 ID=cds-WP_000258247.1;Parent=gene-AD12_RS08620;Dbxref=GenBank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=AD12_RS08620;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 62181 63308 . + . ID=gene-AD12_RS08615;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AD12_RS08615;old_locus_tag=AD12_2981 NZ_JJLK01000069.1 Protein Homology CDS 62181 63308 . + 0 ID=cds-WP_001277801.1;Parent=gene-AD12_RS08615;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AD12_RS08615;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 63336 63536 . + . ID=gene-AD12_RS08610;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AD12_RS08610;old_locus_tag=AD12_2982 NZ_JJLK01000069.1 Protein Homology CDS 63336 63536 . + 0 ID=cds-WP_000383836.1;Parent=gene-AD12_RS08610;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AD12_RS08610;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 63646 64344 . - . ID=gene-AD12_RS08605;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AD12_RS08605;old_locus_tag=AD12_2983 NZ_JJLK01000069.1 Protein Homology CDS 63646 64344 . - 0 ID=cds-WP_000679823.1;Parent=gene-AD12_RS08605;Dbxref=GenBank:WP_000679823.1;Name=WP_000679823.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=AD12_RS08605;product=esterase;protein_id=WP_000679823.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 64418 66433 . - . ID=gene-AD12_RS08600;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AD12_RS08600;old_locus_tag=AD12_2984 NZ_JJLK01000069.1 Protein Homology CDS 64418 66433 . - 0 ID=cds-WP_032286639.1;Parent=gene-AD12_RS08600;Dbxref=GenBank:WP_032286639.1;Name=WP_032286639.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311363.1;locus_tag=AD12_RS08600;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_032286639.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 66448 67311 . - . ID=gene-AD12_RS08595;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AD12_RS08595;old_locus_tag=AD12_2985 NZ_JJLK01000069.1 Protein Homology CDS 66448 67311 . - 0 ID=cds-WP_001267507.1;Parent=gene-AD12_RS08595;Dbxref=GenBank:WP_001267507.1;Name=WP_001267507.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AD12_RS08595;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267507.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 67458 67856 . - . ID=gene-AD12_RS08590;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AD12_RS08590;old_locus_tag=AD12_2986 NZ_JJLK01000069.1 Protein Homology CDS 67458 67856 . - 0 ID=cds-WP_000911330.1;Parent=gene-AD12_RS08590;Dbxref=GenBank:WP_000911330.1;Name=WP_000911330.1;Ontology_term=GO:0000287,GO:0004540;gbkey=CDS;gene=vapC;go_function=magnesium ion binding|0000287||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490590.1;locus_tag=AD12_RS08590;product=type II toxin-antitoxin system tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911330.1;transl_table=11 NZ_JJLK01000069.1 RefSeq pseudogene 67856 68081 . - . ID=gene-AD12_RS0124440;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=pseudogene;locus_tag=AD12_RS0124440;pseudo=true NZ_JJLK01000069.1 Protein Homology CDS 67856 68081 . - 0 ID=cds-AD12_RS0124440;Parent=gene-AD12_RS0124440;Note=frameshifted;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858379.1;locus_tag=AD12_RS0124440;product=toxin-antitoxin system antitoxin VapB;pseudo=true;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 68235 68948 . - . ID=gene-AD12_RS08585;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AD12_RS08585;old_locus_tag=AD12_2987 NZ_JJLK01000069.1 Protein Homology CDS 68235 68948 . - 0 ID=cds-WP_001295467.1;Parent=gene-AD12_RS08585;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AD12_RS08585;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 69161 70195 . - . ID=gene-AD12_RS08580;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AD12_RS08580;old_locus_tag=AD12_2988 NZ_JJLK01000069.1 Protein Homology CDS 69161 70195 . - 0 ID=cds-WP_001297320.1;Parent=gene-AD12_RS08580;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AD12_RS08580;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 70212 71090 . - . ID=gene-AD12_RS08575;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AD12_RS08575;old_locus_tag=AD12_2989 NZ_JJLK01000069.1 Protein Homology CDS 70212 71090 . - 0 ID=cds-WP_001295469.1;Parent=gene-AD12_RS08575;Dbxref=GenBank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AD12_RS08575;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 71236 71808 . + . ID=gene-AD12_RS08570;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AD12_RS08570;old_locus_tag=AD12_2990 NZ_JJLK01000069.1 Protein Homology CDS 71236 71808 . + 0 ID=cds-WP_000176187.1;Parent=gene-AD12_RS08570;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AD12_RS08570;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 71808 72278 . + . ID=gene-AD12_RS08565;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AD12_RS08565;old_locus_tag=AD12_2991 NZ_JJLK01000069.1 Protein Homology CDS 71808 72278 . + 0 ID=cds-WP_001068682.1;Parent=gene-AD12_RS08565;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AD12_RS08565;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 72531 73148 . + . ID=gene-AD12_RS08560;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AD12_RS08560;old_locus_tag=AD12_2992 NZ_JJLK01000069.1 Protein Homology CDS 72531 73148 . + 0 ID=cds-WP_001392477.1;Parent=gene-AD12_RS08560;Dbxref=GenBank:WP_001392477.1;Name=WP_001392477.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311370.2;locus_tag=AD12_RS08560;product=hydrogenase 4 subunit HyfA;protein_id=WP_001392477.1;transl_table=11 NZ_JJLK01000069.1 RefSeq pseudogene 73148 75165 . + . ID=gene-AD12_RS08550;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=pseudogene;locus_tag=AD12_RS08550;old_locus_tag=AD12_2994;pseudo=true NZ_JJLK01000069.1 Protein Homology CDS 73148 75165 . + 0 ID=cds-AD12_RS08550;Parent=gene-AD12_RS08550;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AD12_RS08550;product=hydrogenase 4 subunit B;pseudo=true;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 75176 76123 . + . ID=gene-AD12_RS08545;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AD12_RS08545;old_locus_tag=AD12_2995 NZ_JJLK01000069.1 Protein Homology CDS 75176 76123 . + 0 ID=cds-WP_001311024.1;Parent=gene-AD12_RS08545;Dbxref=GenBank:WP_001311024.1;Name=WP_001311024.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416978.4;locus_tag=AD12_RS08545;product=hydrogenase 4 subunit HyfC;protein_id=WP_001311024.1;transl_table=11 NZ_JJLK01000069.1 RefSeq pseudogene 76140 77371 . + . ID=gene-AD12_RS08540;Name=AD12_RS08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS08540;old_locus_tag=AD12_2996;pseudo=true NZ_JJLK01000069.1 Protein Homology CDS 76140 77371 . + 0 ID=cds-AD12_RS08540;Parent=gene-AD12_RS08540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AD12_RS08540;product=hydrogenase 4 subunit D;pseudo=true;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 77383 78033 . + . ID=gene-AD12_RS08530;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AD12_RS08530;old_locus_tag=AD12_2998 NZ_JJLK01000069.1 Protein Homology CDS 77383 78033 . + 0 ID=cds-WP_000147985.1;Parent=gene-AD12_RS08530;Dbxref=GenBank:WP_000147985.1;Name=WP_000147985.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AD12_RS08530;product=hydrogenase 4 membrane subunit;protein_id=WP_000147985.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 78038 79618 . + . ID=gene-AD12_RS08525;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AD12_RS08525;old_locus_tag=AD12_2999 NZ_JJLK01000069.1 Protein Homology CDS 78038 79618 . + 0 ID=cds-WP_000122560.1;Parent=gene-AD12_RS08525;Dbxref=GenBank:WP_000122560.1;Name=WP_000122560.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AD12_RS08525;product=hydrogenase 4 subunit F;protein_id=WP_000122560.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 79608 81275 . + . ID=gene-AD12_RS08520;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AD12_RS08520;old_locus_tag=AD12_3000 NZ_JJLK01000069.1 Protein Homology CDS 79608 81275 . + 0 ID=cds-WP_001102276.1;Parent=gene-AD12_RS08520;Dbxref=GenBank:WP_001102276.1;Name=WP_001102276.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AD12_RS08520;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102276.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 81285 81830 . + . ID=gene-AD12_RS08515;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AD12_RS08515;old_locus_tag=AD12_3001 NZ_JJLK01000069.1 Protein Homology CDS 81285 81830 . + 0 ID=cds-WP_000916058.1;Parent=gene-AD12_RS08515;Dbxref=GenBank:WP_000916058.1;Name=WP_000916058.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311377.1;locus_tag=AD12_RS08515;product=hydrogenase 4 subunit H;protein_id=WP_000916058.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 81827 82585 . + . ID=gene-AD12_RS08510;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AD12_RS08510;old_locus_tag=AD12_3002 NZ_JJLK01000069.1 Protein Homology CDS 81827 82585 . + 0 ID=cds-WP_000075570.1;Parent=gene-AD12_RS08510;Dbxref=GenBank:WP_000075570.1;Name=WP_000075570.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075566.1;locus_tag=AD12_RS08510;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075570.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 82578 82991 . + . ID=gene-AD12_RS08505;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AD12_RS08505;old_locus_tag=AD12_3003 NZ_JJLK01000069.1 Protein Homology CDS 82578 82991 . + 0 ID=cds-WP_000796789.1;Parent=gene-AD12_RS08505;Dbxref=GenBank:WP_000796789.1;Name=WP_000796789.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AD12_RS08505;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_000796789.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 83021 85033 . + . ID=gene-AD12_RS08500;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AD12_RS08500;old_locus_tag=AD12_3004 NZ_JJLK01000069.1 Protein Homology CDS 83021 85033 . + 0 ID=cds-WP_032179893.1;Parent=gene-AD12_RS08500;Dbxref=GenBank:WP_032179893.1;Name=WP_032179893.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311380.2;locus_tag=AD12_RS08500;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_032179893.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 85055 85903 . + . ID=gene-AD12_RS08495;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AD12_RS08495;old_locus_tag=AD12_3005 NZ_JJLK01000069.1 Protein Homology CDS 85055 85903 . + 0 ID=cds-WP_001244724.1;Parent=gene-AD12_RS08495;Dbxref=GenBank:WP_001244724.1;Name=WP_001244724.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AD12_RS08495;product=formate transporter FocB;protein_id=WP_001244724.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 85941 87002 . - . ID=gene-AD12_RS08490;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AD12_RS08490;old_locus_tag=AD12_3006 NZ_JJLK01000069.1 Protein Homology CDS 85941 87002 . - 0 ID=cds-WP_000892044.1;Parent=gene-AD12_RS08490;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AD12_RS08490;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 87215 88678 . + . ID=gene-AD12_RS08485;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AD12_RS08485;old_locus_tag=AD12_3007 NZ_JJLK01000069.1 Protein Homology CDS 87215 88678 . + 0 ID=cds-WP_000489667.1;Parent=gene-AD12_RS08485;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AD12_RS08485;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 88699 89058 . + . ID=gene-AD12_RS08480;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD12_RS08480;old_locus_tag=AD12_3008 NZ_JJLK01000069.1 Protein Homology CDS 88699 89058 . + 0 ID=cds-WP_000166467.1;Parent=gene-AD12_RS08480;Dbxref=GenBank:WP_000166467.1;Name=WP_000166467.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AD12_RS08480;product=arsenate reductase (glutaredoxin);protein_id=WP_000166467.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 89196 89897 . - . ID=gene-AD12_RS08475;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AD12_RS08475;old_locus_tag=AD12_3009 NZ_JJLK01000069.1 Protein Homology CDS 89196 89897 . - 0 ID=cds-WP_001307333.1;Parent=gene-AD12_RS08475;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AD12_RS08475;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 89992 91281 . - . ID=gene-AD12_RS08470;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AD12_RS08470;old_locus_tag=AD12_3010 NZ_JJLK01000069.1 Protein Homology CDS 89992 91281 . - 0 ID=cds-WP_000198328.1;Parent=gene-AD12_RS08470;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AD12_RS08470;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 91367 91993 . - . ID=gene-AD12_RS08465;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AD12_RS08465;old_locus_tag=AD12_3011 NZ_JJLK01000069.1 Protein Homology CDS 91367 91993 . - 0 ID=cds-WP_001295473.1;Parent=gene-AD12_RS08465;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AD12_RS08465;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 92318 93355 . + . ID=gene-AD12_RS08460;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AD12_RS08460;old_locus_tag=AD12_3013 NZ_JJLK01000069.1 Protein Homology CDS 92318 93355 . + 0 ID=cds-WP_001295474.1;Parent=gene-AD12_RS08460;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AD12_RS08460;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 93355 93993 . + . ID=gene-AD12_RS08455;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AD12_RS08455;old_locus_tag=AD12_3014 NZ_JJLK01000069.1 Protein Homology CDS 93355 93993 . + 0 ID=cds-WP_001465507.1;Parent=gene-AD12_RS08455;Dbxref=GenBank:WP_001465507.1;Name=WP_001465507.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=AD12_RS08455;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001465507.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 94164 96230 . + . ID=gene-AD12_RS08450;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AD12_RS08450;old_locus_tag=AD12_3015 NZ_JJLK01000069.1 Protein Homology CDS 94164 96230 . + 0 ID=cds-WP_001394601.1;Parent=gene-AD12_RS08450;Dbxref=GenBank:WP_001394601.1;Name=WP_001394601.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AD12_RS08450;product=polyphosphate kinase 1;protein_id=WP_001394601.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 96235 97776 . + . ID=gene-AD12_RS08445;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AD12_RS08445;old_locus_tag=AD12_3016 NZ_JJLK01000069.1 Protein Homology CDS 96235 97776 . + 0 ID=cds-WP_001121363.1;Parent=gene-AD12_RS08445;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AD12_RS08445;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 97815 100058 . - . ID=gene-AD12_RS08440;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AD12_RS08440;old_locus_tag=AD12_3017 NZ_JJLK01000069.1 Protein Homology CDS 97815 100058 . - 0 ID=cds-WP_001744031.1;Parent=gene-AD12_RS08440;Dbxref=GenBank:WP_001744031.1;Name=WP_001744031.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311392.1;locus_tag=AD12_RS08440;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_001744031.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 100240 100392 . - . ID=gene-AD12_RS29080;Name=AD12_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29080;old_locus_tag=AD12_3018 NZ_JJLK01000069.1 Protein Homology CDS 100240 100392 . - 0 ID=cds-WP_000017552.1;Parent=gene-AD12_RS29080;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AD12_RS29080;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 100410 100601 . + . ID=gene-AD12_RS0124450;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AD12_RS0124450;old_locus_tag=AD12_3019 NZ_JJLK01000069.1 Protein Homology CDS 100410 100601 . + 0 ID=cds-WP_000076001.1;Parent=gene-AD12_RS0124450;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AD12_RS0124450;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 100912 101430 . + . ID=gene-AD12_RS08430;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AD12_RS08430;old_locus_tag=AD12_3020 NZ_JJLK01000069.1 Protein Homology CDS 100912 101430 . + 0 ID=cds-WP_001295476.1;Parent=gene-AD12_RS08430;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AD12_RS08430;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 101446 101985 . + . ID=gene-AD12_RS08425;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AD12_RS08425;old_locus_tag=AD12_3021 NZ_JJLK01000069.1 Protein Homology CDS 101446 101985 . + 0 ID=cds-WP_000755162.1;Parent=gene-AD12_RS08425;Dbxref=GenBank:WP_000755162.1;Name=WP_000755162.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AD12_RS08425;product=DUF5384 family protein;protein_id=WP_000755162.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 102080 103657 . - . ID=gene-AD12_RS08420;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AD12_RS08420;old_locus_tag=AD12_3022 NZ_JJLK01000069.1 Protein Homology CDS 102080 103657 . - 0 ID=cds-WP_000138282.1;Parent=gene-AD12_RS08420;Dbxref=GenBank:WP_000138282.1;Name=WP_000138282.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AD12_RS08420;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138282.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 103726 105192 . - . ID=gene-AD12_RS08415;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AD12_RS08415;old_locus_tag=AD12_3023 NZ_JJLK01000069.1 Protein Homology CDS 103726 105192 . - 0 ID=cds-WP_001299507.1;Parent=gene-AD12_RS08415;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AD12_RS08415;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 105354 106724 . + . ID=gene-AD12_RS08410;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AD12_RS08410;old_locus_tag=AD12_3025 NZ_JJLK01000069.1 Protein Homology CDS 105354 106724 . + 0 ID=cds-WP_000937933.1;Parent=gene-AD12_RS08410;Dbxref=GenBank:WP_000937933.1;Name=WP_000937933.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AD12_RS08410;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937933.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 106721 106936 . - . ID=gene-AD12_RS08405;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AD12_RS08405;old_locus_tag=AD12_3026 NZ_JJLK01000069.1 Protein Homology CDS 106721 106936 . - 0 ID=cds-WP_001297332.1;Parent=gene-AD12_RS08405;Dbxref=GenBank:WP_001297332.1;Name=WP_001297332.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AD12_RS08405;product=zinc ribbon domain-containing protein;protein_id=WP_001297332.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 107005 108477 . - . ID=gene-AD12_RS08400;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AD12_RS08400;old_locus_tag=AD12_3027 NZ_JJLK01000069.1 Protein Homology CDS 107005 108477 . - 0 ID=cds-WP_000249410.1;Parent=gene-AD12_RS08400;Dbxref=GenBank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AD12_RS08400;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 108595 109773 . - . ID=gene-AD12_RS08395;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AD12_RS08395;old_locus_tag=AD12_3028 NZ_JJLK01000069.1 Protein Homology CDS 108595 109773 . - 0 ID=cds-WP_001177043.1;Parent=gene-AD12_RS08395;Dbxref=GenBank:WP_001177043.1;Name=WP_001177043.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708351.1;locus_tag=AD12_RS08395;product=outer membrane protein assembly factor BamB;protein_id=WP_001177043.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 109784 110404 . - . ID=gene-AD12_RS08390;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AD12_RS08390;old_locus_tag=AD12_3029 NZ_JJLK01000069.1 Protein Homology CDS 109784 110404 . - 0 ID=cds-WP_000409205.1;Parent=gene-AD12_RS08390;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AD12_RS08390;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 110422 111696 . - . ID=gene-AD12_RS08385;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AD12_RS08385;old_locus_tag=AD12_3030 NZ_JJLK01000069.1 Protein Homology CDS 110422 111696 . - 0 ID=cds-WP_001107167.1;Parent=gene-AD12_RS08385;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AD12_RS08385;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 111807 112925 . - . ID=gene-AD12_RS08380;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AD12_RS08380;old_locus_tag=AD12_3031 NZ_JJLK01000069.1 Protein Homology CDS 111807 112925 . - 0 ID=cds-WP_000551807.1;Parent=gene-AD12_RS08380;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AD12_RS08380;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 112952 113965 . - . ID=gene-AD12_RS08375;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AD12_RS08375;old_locus_tag=AD12_3032 NZ_JJLK01000069.1 Protein Homology CDS 112952 113965 . - 0 ID=cds-WP_001090844.1;Parent=gene-AD12_RS08375;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AD12_RS08375;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 114250 115404 . - . ID=gene-AD12_RS08370;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AD12_RS08370;old_locus_tag=AD12_3033 NZ_JJLK01000069.1 Protein Homology CDS 114250 115404 . - 0 ID=cds-WP_000003317.1;Parent=gene-AD12_RS08370;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AD12_RS08370;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 115554 115985 . - . ID=gene-AD12_RS08365;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AD12_RS08365;old_locus_tag=AD12_3034 NZ_JJLK01000069.1 Protein Homology CDS 115554 115985 . - 0 ID=cds-WP_000963837.1;Parent=gene-AD12_RS08365;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AD12_RS08365;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 116134 118446 . - . ID=gene-AD12_RS08360;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AD12_RS08360;old_locus_tag=AD12_3035 NZ_JJLK01000069.1 Protein Homology CDS 116134 118446 . - 0 ID=cds-WP_001137655.1;Parent=gene-AD12_RS08360;Dbxref=GenBank:WP_001137655.1;Name=WP_001137655.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AD12_RS08360;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137655.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 118447 123408 . - . ID=gene-AD12_RS08355;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AD12_RS08355;old_locus_tag=AD12_3036 NZ_JJLK01000069.1 Protein Homology CDS 118447 123408 . - 0 ID=cds-WP_000736274.1;Parent=gene-AD12_RS08355;Dbxref=GenBank:WP_000736274.1;Name=WP_000736274.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AD12_RS08355;product=alpha2-macroglobulin;protein_id=WP_000736274.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 123615 124460 . + . ID=gene-AD12_RS08350;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AD12_RS08350;old_locus_tag=AD12_3037 NZ_JJLK01000069.1 Protein Homology CDS 123615 124460 . + 0 ID=cds-WP_000108626.1;Parent=gene-AD12_RS08350;Dbxref=GenBank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AD12_RS08350;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 124796 124921 . + . ID=gene-AD12_RS29545;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AD12_RS29545 NZ_JJLK01000069.1 Protein Homology CDS 124796 124921 . + 0 ID=cds-WP_001385884.1;Parent=gene-AD12_RS29545;Dbxref=GenBank:WP_001385884.1;Name=WP_001385884.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AD12_RS29545;product=small toxic inner membrane protein TimP;protein_id=WP_001385884.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 124953 125729 . - . ID=gene-AD12_RS08345;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AD12_RS08345;old_locus_tag=AD12_3038 NZ_JJLK01000069.1 Protein Homology CDS 124953 125729 . - 0 ID=cds-WP_001298978.1;Parent=gene-AD12_RS08345;Dbxref=GenBank:WP_001298978.1;Name=WP_001298978.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AD12_RS08345;product=enhanced serine sensitivity protein SseB;protein_id=WP_001298978.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 125871 127154 . - . ID=gene-AD12_RS08340;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AD12_RS08340;old_locus_tag=AD12_3039 NZ_JJLK01000069.1 Protein Homology CDS 125871 127154 . - 0 ID=cds-WP_000133582.1;Parent=gene-AD12_RS08340;Dbxref=GenBank:WP_000133582.1;Name=WP_000133582.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311416.2;locus_tag=AD12_RS08340;product=aminopeptidase PepB;protein_id=WP_000133582.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 127332 127532 . - . ID=gene-AD12_RS08335;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AD12_RS08335;old_locus_tag=AD12_3040 NZ_JJLK01000069.1 Protein Homology CDS 127332 127532 . - 0 ID=cds-WP_000523616.1;Parent=gene-AD12_RS08335;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AD12_RS08335;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 127544 127879 . - . ID=gene-AD12_RS08330;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AD12_RS08330;old_locus_tag=AD12_3041 NZ_JJLK01000069.1 Protein Homology CDS 127544 127879 . - 0 ID=cds-WP_001124469.1;Parent=gene-AD12_RS08330;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AD12_RS08330;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 127881 129731 . - . ID=gene-AD12_RS08325;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AD12_RS08325;old_locus_tag=AD12_3042 NZ_JJLK01000069.1 Protein Homology CDS 127881 129731 . - 0 ID=cds-WP_001196613.1;Parent=gene-AD12_RS08325;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AD12_RS08325;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 129748 130263 . - . ID=gene-AD12_RS08320;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AD12_RS08320;old_locus_tag=AD12_3043 NZ_JJLK01000069.1 Protein Homology CDS 129748 130263 . - 0 ID=cds-WP_000384413.1;Parent=gene-AD12_RS08320;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AD12_RS08320;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 130359 130682 . - . ID=gene-AD12_RS08315;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AD12_RS08315;old_locus_tag=AD12_3045 NZ_JJLK01000069.1 Protein Homology CDS 130359 130682 . - 0 ID=cds-WP_000028953.1;Parent=gene-AD12_RS08315;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AD12_RS08315;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 130699 131085 . - . ID=gene-AD12_RS08310;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AD12_RS08310;old_locus_tag=AD12_3046 NZ_JJLK01000069.1 Protein Homology CDS 130699 131085 . - 0 ID=cds-WP_000331707.1;Parent=gene-AD12_RS08310;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AD12_RS08310;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 131113 132327 . - . ID=gene-AD12_RS08305;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AD12_RS08305;old_locus_tag=AD12_3047 NZ_JJLK01000069.1 Protein Homology CDS 131113 132327 . - 0 ID=cds-WP_001295373.1;Parent=gene-AD12_RS08305;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AD12_RS08305;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JJLK01000069.1 RefSeq gene 132439 132927 . - . ID=gene-AD12_RS08300;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AD12_RS08300;old_locus_tag=AD12_3048 NZ_JJLK01000069.1 Protein Homology CDS 132439 132927 . - 0 ID=cds-WP_001241357.1;Parent=gene-AD12_RS08300;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AD12_RS08300;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 ##sequence-region NZ_JJLK01000070.1 1 56711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000070.1 RefSeq region 1 56711 . + . ID=NZ_JJLK01000070.1:1..56711;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000070.1 RefSeq pseudogene 1 619 . + . ID=gene-AD12_RS08295;Name=AD12_RS08295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS08295;old_locus_tag=AD12_3049;partial=true;pseudo=true;start_range=.,1 NZ_JJLK01000070.1 Protein Homology CDS 1 619 . + 2 ID=cds-AD12_RS08295;Parent=gene-AD12_RS08295;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD12_RS08295;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 919 2085 . + . ID=gene-AD12_RS08290;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AD12_RS08290;old_locus_tag=AD12_3050 NZ_JJLK01000070.1 Protein Homology CDS 919 2085 . + 0 ID=cds-WP_001238646.1;Parent=gene-AD12_RS08290;Dbxref=GenBank:WP_001238646.1;Name=WP_001238646.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AD12_RS08290;product=plasmid-partitioning protein SopA;protein_id=WP_001238646.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 2085 3056 . + . ID=gene-AD12_RS08285;Name=AD12_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08285;old_locus_tag=AD12_3051 NZ_JJLK01000070.1 Protein Homology CDS 2085 3056 . + 0 ID=cds-WP_000817028.1;Parent=gene-AD12_RS08285;Dbxref=GenBank:WP_000817028.1;Name=WP_000817028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817027.1;locus_tag=AD12_RS08285;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_000817028.1;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 3521 3690 . + . ID=gene-AD12_RS29550;Name=AD12_RS29550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29550;partial=true;pseudo=true;start_range=.,3521 NZ_JJLK01000070.1 Protein Homology CDS 3521 3690 . + 0 ID=cds-AD12_RS29550;Parent=gene-AD12_RS29550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052647.1;locus_tag=AD12_RS29550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3521;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 3687 4034 . + . ID=gene-AD12_RS29085;Name=AD12_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29085 NZ_JJLK01000070.1 GeneMarkS-2+ CDS 3687 4034 . + 0 ID=cds-WP_001350917.1;Parent=gene-AD12_RS29085;Dbxref=GenBank:WP_001350917.1;Name=WP_001350917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29085;product=hypothetical protein;protein_id=WP_001350917.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 4103 4678 . + . ID=gene-AD12_RS0124470;Name=AD12_RS0124470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124470 NZ_JJLK01000070.1 Protein Homology CDS 4103 4678 . + 0 ID=cds-WP_000343071.1;Parent=gene-AD12_RS0124470;Dbxref=GenBank:WP_000343071.1;Name=WP_000343071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343071.1;locus_tag=AD12_RS0124470;product=mobilome CxxCx(11)CxxC protein;protein_id=WP_000343071.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 4691 4903 . + . ID=gene-AD12_RS0124475;Name=AD12_RS0124475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124475 NZ_JJLK01000070.1 Protein Homology CDS 4691 4903 . + 0 ID=cds-WP_000092896.1;Parent=gene-AD12_RS0124475;Dbxref=GenBank:WP_000092896.1;Name=WP_000092896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092896.1;locus_tag=AD12_RS0124475;product=hypothetical protein;protein_id=WP_000092896.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 5164 6135 . - . ID=gene-AD12_RS08280;Name=AD12_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08280;old_locus_tag=AD12_3053 NZ_JJLK01000070.1 Protein Homology CDS 5164 6135 . - 0 ID=cds-WP_000082154.1;Parent=gene-AD12_RS08280;Dbxref=GenBank:WP_000082154.1;Name=WP_000082154.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082154.1;locus_tag=AD12_RS08280;product=IS110-like element ISEc32 family transposase;protein_id=WP_000082154.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 6537 6962 . + . ID=gene-AD12_RS08275;Name=AD12_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08275;old_locus_tag=AD12_3054 NZ_JJLK01000070.1 Protein Homology CDS 6537 6962 . + 0 ID=cds-WP_001198922.1;Parent=gene-AD12_RS08275;Dbxref=GenBank:WP_001198922.1;Name=WP_001198922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AD12_RS08275;product=antirestriction protein;protein_id=WP_001198922.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 6962 7423 . + . ID=gene-AD12_RS08270;Name=AD12_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08270;old_locus_tag=AD12_3055 NZ_JJLK01000070.1 Protein Homology CDS 6962 7423 . + 0 ID=cds-WP_042007484.1;Parent=gene-AD12_RS08270;Dbxref=GenBank:WP_042007484.1;Name=WP_042007484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545327.1;locus_tag=AD12_RS08270;product=DUF1380 family protein;protein_id=WP_042007484.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 7423 7605 . + . ID=gene-AD12_RS08265;Name=AD12_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08265;old_locus_tag=AD12_3056 NZ_JJLK01000070.1 Protein Homology CDS 7423 7605 . + 0 ID=cds-WP_001027505.1;Parent=gene-AD12_RS08265;Dbxref=GenBank:WP_001027505.1;Name=WP_001027505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027505.1;locus_tag=AD12_RS08265;product=hypothetical protein;protein_id=WP_001027505.1;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 7823 8082 . - . ID=gene-AD12_RS29555;Name=AD12_RS29555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29555;partial=true;pseudo=true;start_range=.,7823 NZ_JJLK01000070.1 Protein Homology CDS 7823 8082 . - 0 ID=cds-AD12_RS29555;Parent=gene-AD12_RS29555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AD12_RS29555;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7823;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 8599 8829 . + . ID=gene-AD12_RS0124485;Name=AD12_RS0124485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124485 NZ_JJLK01000070.1 Protein Homology CDS 8599 8829 . + 0 ID=cds-WP_001473150.1;Parent=gene-AD12_RS0124485;Dbxref=GenBank:WP_001473150.1;Name=WP_001473150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AD12_RS0124485;product=hypothetical protein;protein_id=WP_001473150.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 8881 10242 . + . ID=gene-AD12_RS08260;Name=AD12_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08260;old_locus_tag=AD12_3058 NZ_JJLK01000070.1 Protein Homology CDS 8881 10242 . + 0 ID=cds-WP_000170680.1;Parent=gene-AD12_RS08260;Dbxref=GenBank:WP_000170680.1;Name=WP_000170680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AD12_RS08260;product=DUF3560 domain-containing protein;protein_id=WP_000170680.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 10290 10853 . + . ID=gene-AD12_RS08255;Name=AD12_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08255;old_locus_tag=AD12_3059 NZ_JJLK01000070.1 Protein Homology CDS 10290 10853 . + 0 ID=cds-WP_001332335.1;Parent=gene-AD12_RS08255;Dbxref=GenBank:WP_001332335.1;Name=WP_001332335.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AD12_RS08255;product=methyltransferase;protein_id=WP_001332335.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 10939 11358 . - . ID=gene-AD12_RS0124490;Name=AD12_RS0124490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124490 NZ_JJLK01000070.1 Protein Homology CDS 10939 11358 . - 0 ID=cds-WP_032252684.1;Parent=gene-AD12_RS0124490;Dbxref=GenBank:WP_032252684.1;Name=WP_032252684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AD12_RS0124490;product=hypothetical protein;protein_id=WP_032252684.1;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 11659 12186 . + . ID=gene-AD12_RS08250;Name=AD12_RS08250;end_range=12186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS08250;old_locus_tag=AD12_3060;partial=true;pseudo=true NZ_JJLK01000070.1 Protein Homology CDS 11659 12186 . + 0 ID=cds-AD12_RS08250;Parent=gene-AD12_RS08250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AD12_RS08250;partial=true;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 12254 12487 . + . ID=gene-AD12_RS08245;Name=AD12_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08245;old_locus_tag=AD12_3061 NZ_JJLK01000070.1 Protein Homology CDS 12254 12487 . + 0 ID=cds-WP_000005988.1;Parent=gene-AD12_RS08245;Dbxref=GenBank:WP_000005988.1;Name=WP_000005988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AD12_RS08245;product=DUF905 family protein;protein_id=WP_000005988.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 12551 14509 . + . ID=gene-AD12_RS08240;Name=AD12_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08240;old_locus_tag=AD12_3062 NZ_JJLK01000070.1 Protein Homology CDS 12551 14509 . + 0 ID=cds-WP_000117202.1;Parent=gene-AD12_RS08240;Dbxref=GenBank:WP_000117202.1;Name=WP_000117202.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AD12_RS08240;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000117202.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 14564 14998 . + . ID=gene-AD12_RS08235;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AD12_RS08235;old_locus_tag=AD12_3063 NZ_JJLK01000070.1 Protein Homology CDS 14564 14998 . + 0 ID=cds-WP_000845922.1;Parent=gene-AD12_RS08235;Dbxref=GenBank:WP_000845922.1;Name=WP_000845922.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052658.1;locus_tag=AD12_RS08235;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845922.1;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 14995 15781 . + . ID=gene-AD12_RS08230;Name=AD12_RS08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS08230;old_locus_tag=AD12_3064;pseudo=true NZ_JJLK01000070.1 Protein Homology CDS 14995 15781 . + 0 ID=cds-AD12_RS08230;Parent=gene-AD12_RS08230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AD12_RS08230;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 15971 16084 . + . ID=gene-AD12_RS29560;Name=AD12_RS29560;end_range=16084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29560;partial=true;pseudo=true NZ_JJLK01000070.1 Protein Homology CDS 15971 16084 . + 0 ID=cds-AD12_RS29560;Parent=gene-AD12_RS29560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16084,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AD12_RS29560;partial=true;product=DUF5431 family protein;pseudo=true;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 16029 16151 . + . ID=gene-AD12_RS0124505;Name=AD12_RS0124505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124505 NZ_JJLK01000070.1 Protein Homology CDS 16029 16151 . + 0 ID=cds-WP_223195199.1;Parent=gene-AD12_RS0124505;Dbxref=GenBank:WP_223195199.1;Name=WP_223195199.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=AD12_RS0124505;product=Hok/Gef family protein;protein_id=WP_223195199.1;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 16428 16749 . - . ID=gene-AD12_RS28780;Name=AD12_RS28780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28780;partial=true;pseudo=true;start_range=.,16428 NZ_JJLK01000070.1 Protein Homology CDS 16428 16749 . - 0 ID=cds-AD12_RS28780;Parent=gene-AD12_RS28780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AD12_RS28780;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16428;transl_table=11 NZ_JJLK01000070.1 RefSeq pseudogene 16820 17025 . + . ID=gene-AD12_RS29915;Name=AD12_RS29915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29915;pseudo=true NZ_JJLK01000070.1 Protein Homology CDS 16820 17025 . + 0 ID=cds-AD12_RS29915;Parent=gene-AD12_RS29915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AD12_RS29915;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 17050 17337 . + . ID=gene-AD12_RS08225;Name=AD12_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08225;old_locus_tag=AD12_3068 NZ_JJLK01000070.1 Protein Homology CDS 17050 17337 . + 0 ID=cds-WP_000107520.1;Parent=gene-AD12_RS08225;Dbxref=GenBank:WP_000107520.1;Name=WP_000107520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AD12_RS08225;product=hypothetical protein;protein_id=WP_000107520.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 17456 18277 . + . ID=gene-AD12_RS08220;Name=AD12_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08220;old_locus_tag=AD12_3069 NZ_JJLK01000070.1 Protein Homology CDS 17456 18277 . + 0 ID=cds-WP_001234468.1;Parent=gene-AD12_RS08220;Dbxref=GenBank:WP_001234468.1;Name=WP_001234468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AD12_RS08220;product=DUF932 domain-containing protein;protein_id=WP_001234468.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 18573 19082 . - . ID=gene-AD12_RS08215;Name=AD12_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08215;old_locus_tag=AD12_3070 NZ_JJLK01000070.1 Protein Homology CDS 18573 19082 . - 0 ID=cds-WP_000759163.1;Parent=gene-AD12_RS08215;Dbxref=GenBank:WP_000759163.1;Name=WP_000759163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368925.1;locus_tag=AD12_RS08215;product=transglycosylase SLT domain-containing protein;protein_id=WP_000759163.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 19497 19880 . + . ID=gene-AD12_RS08210;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AD12_RS08210;old_locus_tag=AD12_3071 NZ_JJLK01000070.1 Protein Homology CDS 19497 19880 . + 0 ID=cds-WP_001151524.1;Parent=gene-AD12_RS08210;Dbxref=GenBank:WP_001151524.1;Name=WP_001151524.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AD12_RS08210;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151524.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 20067 20756 . + . ID=gene-AD12_RS08205;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AD12_RS08205;old_locus_tag=AD12_3072 NZ_JJLK01000070.1 Protein Homology CDS 20067 20756 . + 0 ID=cds-WP_000283385.1;Parent=gene-AD12_RS08205;Dbxref=GenBank:WP_000283385.1;Name=WP_000283385.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003979562.1;locus_tag=AD12_RS08205;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_000283385.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 20855 21250 . + . ID=gene-AD12_RS0124520;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AD12_RS0124520 NZ_JJLK01000070.1 Protein Homology CDS 20855 21250 . + 0 ID=cds-WP_001309237.1;Parent=gene-AD12_RS0124520;Dbxref=GenBank:WP_001309237.1;Name=WP_001309237.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traY;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366159.1;locus_tag=AD12_RS0124520;product=conjugal transfer relaxosome DNA-bindin protein TraY;protein_id=WP_001309237.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 21283 21648 . + . ID=gene-AD12_RS0124525;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AD12_RS0124525;old_locus_tag=AD12_3074 NZ_JJLK01000070.1 Protein Homology CDS 21283 21648 . + 0 ID=cds-WP_000994779.1;Parent=gene-AD12_RS0124525;Dbxref=GenBank:WP_000994779.1;Name=WP_000994779.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098999.1;locus_tag=AD12_RS0124525;product=type IV conjugative transfer system pilin TraA;protein_id=WP_000994779.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 21663 21974 . + . ID=gene-AD12_RS08200;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AD12_RS08200;old_locus_tag=AD12_3075 NZ_JJLK01000070.1 Protein Homology CDS 21663 21974 . + 0 ID=cds-WP_000012106.1;Parent=gene-AD12_RS08200;Dbxref=GenBank:WP_000012106.1;Name=WP_000012106.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AD12_RS08200;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012106.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 21996 22562 . + . ID=gene-AD12_RS08195;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AD12_RS08195;old_locus_tag=AD12_3076 NZ_JJLK01000070.1 Protein Homology CDS 21996 22562 . + 0 ID=cds-WP_000399785.1;Parent=gene-AD12_RS08195;Dbxref=GenBank:WP_000399785.1;Name=WP_000399785.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AD12_RS08195;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399785.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 22549 23277 . + . ID=gene-AD12_RS0124530;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AD12_RS0124530 NZ_JJLK01000070.1 Protein Homology CDS 22549 23277 . + 0 ID=cds-WP_001230787.1;Parent=gene-AD12_RS0124530;Dbxref=GenBank:WP_001230787.1;Name=WP_001230787.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AD12_RS0124530;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230787.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 23277 24704 . + . ID=gene-AD12_RS08190;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AD12_RS08190;old_locus_tag=AD12_3078 NZ_JJLK01000070.1 Protein Homology CDS 23277 24704 . + 0 ID=cds-WP_032286643.1;Parent=gene-AD12_RS08190;Dbxref=GenBank:WP_032286643.1;Name=WP_032286643.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AD12_RS08190;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_032286643.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 24694 25284 . + . ID=gene-AD12_RS0124535;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AD12_RS0124535 NZ_JJLK01000070.1 Protein Homology CDS 24694 25284 . + 0 ID=cds-WP_000002796.1;Parent=gene-AD12_RS0124535;Dbxref=GenBank:WP_000002796.1;Name=WP_000002796.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AD12_RS0124535;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_000002796.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 25271 25468 . + . ID=gene-AD12_RS08185;Name=AD12_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08185;old_locus_tag=AD12_3080 NZ_JJLK01000070.1 Protein Homology CDS 25271 25468 . + 0 ID=cds-WP_001324648.1;Parent=gene-AD12_RS08185;Dbxref=GenBank:WP_001324648.1;Name=WP_001324648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001423674.1;locus_tag=AD12_RS08185;product=conjugal transfer protein TrbD;protein_id=WP_001324648.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 25480 25731 . + . ID=gene-AD12_RS08180;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AD12_RS08180;old_locus_tag=AD12_3081 NZ_JJLK01000070.1 Protein Homology CDS 25480 25731 . + 0 ID=cds-WP_001038342.1;Parent=gene-AD12_RS08180;Dbxref=GenBank:WP_001038342.1;Name=WP_001038342.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AD12_RS08180;product=conjugal transfer protein TrbG;protein_id=WP_001038342.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 25728 26243 . + . ID=gene-AD12_RS08175;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AD12_RS08175;old_locus_tag=AD12_3082 NZ_JJLK01000070.1 Protein Homology CDS 25728 26243 . + 0 ID=cds-WP_000809841.1;Parent=gene-AD12_RS08175;Dbxref=GenBank:WP_000809841.1;Name=WP_000809841.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AD12_RS08175;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809841.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 26378 26599 . + . ID=gene-AD12_RS27060;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AD12_RS27060;old_locus_tag=AD12_3083 NZ_JJLK01000070.1 Protein Homology CDS 26378 26599 . + 0 ID=cds-WP_001278689.1;Parent=gene-AD12_RS27060;Dbxref=GenBank:WP_001278689.1;Name=WP_001278689.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AD12_RS27060;product=conjugal transfer protein TraR;protein_id=WP_001278689.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 26759 29386 . + . ID=gene-AD12_RS08165;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AD12_RS08165;old_locus_tag=AD12_3084 NZ_JJLK01000070.1 Protein Homology CDS 26759 29386 . + 0 ID=cds-WP_001064252.1;Parent=gene-AD12_RS08165;Dbxref=GenBank:WP_001064252.1;Name=WP_001064252.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AD12_RS08165;product=type IV secretion system protein TraC;protein_id=WP_001064252.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 29383 29769 . + . ID=gene-AD12_RS08160;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AD12_RS08160;old_locus_tag=AD12_3085 NZ_JJLK01000070.1 Protein Homology CDS 29383 29769 . + 0 ID=cds-WP_000214082.1;Parent=gene-AD12_RS08160;Dbxref=GenBank:WP_000214082.1;Name=WP_000214082.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AD12_RS08160;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000214082.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 29766 30398 . + . ID=gene-AD12_RS08155;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AD12_RS08155;old_locus_tag=AD12_3086 NZ_JJLK01000070.1 Protein Homology CDS 29766 30398 . + 0 ID=cds-WP_001203720.1;Parent=gene-AD12_RS08155;Dbxref=GenBank:WP_001203720.1;Name=WP_001203720.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AD12_RS08155;product=type-F conjugative transfer system protein TraW;protein_id=WP_001203720.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 30395 31387 . + . ID=gene-AD12_RS08150;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AD12_RS08150;old_locus_tag=AD12_3087 NZ_JJLK01000070.1 Protein Homology CDS 30395 31387 . + 0 ID=cds-WP_000830839.1;Parent=gene-AD12_RS08150;Dbxref=GenBank:WP_000830839.1;Name=WP_000830839.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AD12_RS08150;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830839.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 31396 32034 . + . ID=gene-AD12_RS08145;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AD12_RS08145;old_locus_tag=AD12_3088 NZ_JJLK01000070.1 Protein Homology CDS 31396 32034 . + 0 ID=cds-WP_000777693.1;Parent=gene-AD12_RS08145;Dbxref=GenBank:WP_000777693.1;Name=WP_000777693.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553832.1;locus_tag=AD12_RS08145;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_000777693.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 32031 33839 . + . ID=gene-AD12_RS08140;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AD12_RS08140;old_locus_tag=AD12_3089 NZ_JJLK01000070.1 Protein Homology CDS 32031 33839 . + 0 ID=cds-WP_000821846.1;Parent=gene-AD12_RS08140;Dbxref=GenBank:WP_000821846.1;Name=WP_000821846.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AD12_RS08140;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_000821846.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 33866 34123 . + . ID=gene-AD12_RS08135;Name=AD12_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08135;old_locus_tag=AD12_3090 NZ_JJLK01000070.1 Protein Homology CDS 33866 34123 . + 0 ID=cds-WP_000864325.1;Parent=gene-AD12_RS08135;Dbxref=GenBank:WP_000864325.1;Name=WP_000864325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AD12_RS08135;product=conjugal transfer protein TrbE;protein_id=WP_000864325.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 34116 34859 . + . ID=gene-AD12_RS08130;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AD12_RS08130;old_locus_tag=AD12_3091 NZ_JJLK01000070.1 Protein Homology CDS 34116 34859 . + 0 ID=cds-WP_001514239.1;Parent=gene-AD12_RS08130;Dbxref=GenBank:WP_001514239.1;Name=WP_001514239.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AD12_RS08130;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001514239.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 34875 35222 . + . ID=gene-AD12_RS08125;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AD12_RS08125;old_locus_tag=AD12_3092 NZ_JJLK01000070.1 Protein Homology CDS 34875 35222 . + 0 ID=cds-WP_001287677.1;Parent=gene-AD12_RS08125;Dbxref=GenBank:WP_001287677.1;Name=WP_001287677.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287890.1;locus_tag=AD12_RS08125;product=conjugal transfer protein TrbA;protein_id=WP_001287677.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 35341 35625 . + . ID=gene-AD12_RS08120;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AD12_RS08120;old_locus_tag=AD12_3093 NZ_JJLK01000070.1 Protein Homology CDS 35341 35625 . + 0 ID=cds-WP_000624110.1;Parent=gene-AD12_RS08120;Dbxref=GenBank:WP_000624110.1;Name=WP_000624110.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AD12_RS08120;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_000624110.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 35612 36157 . + . ID=gene-AD12_RS08115;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AD12_RS08115;old_locus_tag=AD12_3094 NZ_JJLK01000070.1 Protein Homology CDS 35612 36157 . + 0 ID=cds-WP_000052618.1;Parent=gene-AD12_RS08115;Dbxref=GenBank:WP_000052618.1;Name=WP_000052618.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AD12_RS08115;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000052618.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 36087 36449 . + . ID=gene-AD12_RS08110;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AD12_RS08110;old_locus_tag=AD12_3095 NZ_JJLK01000070.1 Protein Homology CDS 36087 36449 . + 0 ID=cds-WP_010379880.1;Parent=gene-AD12_RS08110;Dbxref=GenBank:WP_010379880.1;Name=WP_010379880.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009424419.1;locus_tag=AD12_RS08110;product=P-type conjugative transfer protein TrbJ;protein_id=WP_010379880.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 36449 37822 . + . ID=gene-AD12_RS08105;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AD12_RS08105;old_locus_tag=AD12_3096 NZ_JJLK01000070.1 Protein Homology CDS 36449 37822 . + 0 ID=cds-WP_001494769.1;Parent=gene-AD12_RS08105;Dbxref=GenBank:WP_001494769.1;Name=WP_001494769.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137359.1;locus_tag=AD12_RS08105;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001494769.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 37819 40644 . + . ID=gene-AD12_RS08100;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AD12_RS08100;old_locus_tag=AD12_3097 NZ_JJLK01000070.1 Protein Homology CDS 37819 40644 . + 0 ID=cds-WP_001007045.1;Parent=gene-AD12_RS08100;Dbxref=GenBank:WP_001007045.1;Name=WP_001007045.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007007.1;locus_tag=AD12_RS08100;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_001007045.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 40641 41150 . + . ID=gene-AD12_RS0124540;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=AD12_RS0124540 NZ_JJLK01000070.1 Protein Homology CDS 40641 41150 . + 0 ID=cds-WP_000628099.1;Parent=gene-AD12_RS0124540;Dbxref=GenBank:WP_000628099.1;Name=WP_000628099.1;Note=TraS%2C as the term is used in F-like plasmids%2C is a plasmid entry exclusion protein. It interacts with the F-like plasmid mating stabilization protein TraG.;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898910.1;locus_tag=AD12_RS0124540;product=conjugal transfer entry exclusion protein TraS;protein_id=WP_000628099.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 41164 41895 . + . ID=gene-AD12_RS08095;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AD12_RS08095;old_locus_tag=AD12_3098 NZ_JJLK01000070.1 Protein Homology CDS 41164 41895 . + 0 ID=cds-WP_000850424.1;Parent=gene-AD12_RS08095;Dbxref=GenBank:WP_000850424.1;Name=WP_000850424.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AD12_RS08095;product=conjugal transfer complement resistance protein TraT;protein_id=WP_000850424.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 42148 44301 . + . ID=gene-AD12_RS08090;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AD12_RS08090;old_locus_tag=AD12_3099 NZ_JJLK01000070.1 Protein Homology CDS 42148 44301 . + 0 ID=cds-WP_032286645.1;Parent=gene-AD12_RS08090;Dbxref=GenBank:WP_032286645.1;Name=WP_032286645.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589353.1;locus_tag=AD12_RS08090;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032286645.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 44301 49571 . + . ID=gene-AD12_RS08085;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AD12_RS08085;old_locus_tag=AD12_3100 NZ_JJLK01000070.1 Protein Homology CDS 44301 49571 . + 0 ID=cds-WP_001514237.1;Parent=gene-AD12_RS08085;Dbxref=GenBank:WP_001514237.1;Name=WP_001514237.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AD12_RS08085;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_001514237.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 49591 50337 . + . ID=gene-AD12_RS08080;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AD12_RS08080;old_locus_tag=AD12_3101 NZ_JJLK01000070.1 Protein Homology CDS 49591 50337 . + 0 ID=cds-WP_000205766.1;Parent=gene-AD12_RS08080;Dbxref=GenBank:WP_000205766.1;Name=WP_000205766.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052669.1;locus_tag=AD12_RS08080;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000205766.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 50396 51256 . + . ID=gene-AD12_RS08075;Name=uilS;gbkey=Gene;gene=uilS;gene_biotype=protein_coding;locus_tag=AD12_RS08075;old_locus_tag=AD12_3102 NZ_JJLK01000070.1 Protein Homology CDS 50396 51256 . + 0 ID=cds-WP_000704522.1;Parent=gene-AD12_RS08075;Dbxref=GenBank:WP_000704522.1;Name=WP_000704522.1;gbkey=CDS;gene=uilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=AD12_RS08075;product=UilS family quorum-quenching N-acyl-homoserine lactonase;protein_id=WP_000704522.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 51359 51919 . + . ID=gene-AD12_RS08070;Name=AD12_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08070;old_locus_tag=AD12_3103 NZ_JJLK01000070.1 Protein Homology CDS 51359 51919 . + 0 ID=cds-WP_000840464.1;Parent=gene-AD12_RS08070;Dbxref=GenBank:WP_000840464.1;Name=WP_000840464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AD12_RS08070;product=fertility inhibition protein FinO;protein_id=WP_000840464.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 52052 52264 . + . ID=gene-AD12_RS08065;Name=AD12_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08065;old_locus_tag=AD12_3104 NZ_JJLK01000070.1 Protein Homology CDS 52052 52264 . + 0 ID=cds-WP_001371875.1;Parent=gene-AD12_RS08065;Dbxref=GenBank:WP_001371875.1;Name=WP_001371875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AD12_RS08065;product=ANR family transcriptional regulator;protein_id=WP_001371875.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 52509 52970 . + . ID=gene-AD12_RS08060;Name=AD12_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08060;old_locus_tag=AD12_3105 NZ_JJLK01000070.1 Protein Homology CDS 52509 52970 . + 0 ID=cds-WP_001514236.1;Parent=gene-AD12_RS08060;Dbxref=GenBank:WP_001514236.1;Name=WP_001514236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AD12_RS08060;product=thermonuclease family protein;protein_id=WP_001514236.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 53016 53225 . + . ID=gene-AD12_RS08055;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD12_RS08055;old_locus_tag=AD12_3106 NZ_JJLK01000070.1 Protein Homology CDS 53016 53225 . + 0 ID=cds-WP_001514235.1;Parent=gene-AD12_RS08055;Dbxref=GenBank:WP_001514235.1;Name=WP_001514235.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AD12_RS08055;product=hemolysin expression modulator Hha;protein_id=WP_001514235.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 53264 53854 . + . ID=gene-AD12_RS08050;Name=AD12_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS08050;old_locus_tag=AD12_3107 NZ_JJLK01000070.1 Protein Homology CDS 53264 53854 . + 0 ID=cds-WP_000766816.1;Parent=gene-AD12_RS08050;Dbxref=GenBank:WP_000766816.1;Name=WP_000766816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AD12_RS08050;product=DUF2726 domain-containing protein;protein_id=WP_000766816.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 54094 54354 . + . ID=gene-AD12_RS0124545;Name=AD12_RS0124545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124545;old_locus_tag=AD12_3108 NZ_JJLK01000070.1 Protein Homology CDS 54094 54354 . + 0 ID=cds-WP_000083819.1;Parent=gene-AD12_RS0124545;Dbxref=GenBank:WP_000083819.1;Name=WP_000083819.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858391.1;locus_tag=AD12_RS0124545;product=replication regulatory protein RepA;protein_id=WP_000083819.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 54579 54653 . + . ID=gene-AD12_RS0124550;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD12_RS0124550 NZ_JJLK01000070.1 Protein Homology CDS 54579 54653 . + 0 ID=cds-WP_001365705.1;Parent=gene-AD12_RS0124550;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AD12_RS0124550;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 54646 55503 . + . ID=gene-AD12_RS08045;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD12_RS08045;old_locus_tag=AD12_3110 NZ_JJLK01000070.1 Protein Homology CDS 54646 55503 . + 0 ID=cds-WP_001514234.1;Parent=gene-AD12_RS08045;Dbxref=GenBank:WP_001514234.1;Name=WP_001514234.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AD12_RS08045;product=incFII family plasmid replication initiator RepA;protein_id=WP_001514234.1;transl_table=11 NZ_JJLK01000070.1 RefSeq gene 56419 56688 . + . ID=gene-AD12_RS08040;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AD12_RS08040;old_locus_tag=AD12_3111 NZ_JJLK01000070.1 Protein Homology CDS 56419 56688 . + 0 ID=cds-WP_000079941.1;Parent=gene-AD12_RS08040;Dbxref=GenBank:WP_000079941.1;Name=WP_000079941.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AD12_RS08040;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079941.1;transl_table=11 ##sequence-region NZ_JJLK01000071.1 1 65607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000071.1 RefSeq region 1 65607 . + . ID=NZ_JJLK01000071.1:1..65607;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000071.1 RefSeq gene 1 929 . - . ID=gene-AD12_RS08035;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AD12_RS08035;old_locus_tag=AD12_3112;partial=true;start_range=.,1 NZ_JJLK01000071.1 Protein Homology CDS 1 929 . - 0 ID=cds-WP_032286649.1;Parent=gene-AD12_RS08035;Dbxref=GenBank:WP_032286649.1;Name=WP_032286649.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AD12_RS08035;partial=true;product=cysteine desulfurase;protein_id=WP_032286649.1;start_range=.,1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 1041 1529 . - . ID=gene-AD12_RS08030;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AD12_RS08030;old_locus_tag=AD12_3113 NZ_JJLK01000071.1 Protein Homology CDS 1041 1529 . - 0 ID=cds-WP_001241357.1-2;Parent=gene-AD12_RS08030;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AD12_RS08030;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 1831 2568 . - . ID=gene-AD12_RS08025;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AD12_RS08025;old_locus_tag=AD12_3114 NZ_JJLK01000071.1 Protein Homology CDS 1831 2568 . - 0 ID=cds-WP_000940018.1;Parent=gene-AD12_RS08025;Dbxref=GenBank:WP_000940018.1;Name=WP_000940018.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311425.1;locus_tag=AD12_RS08025;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940018.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 2687 3490 . + . ID=gene-AD12_RS08020;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AD12_RS08020;old_locus_tag=AD12_3115 NZ_JJLK01000071.1 Protein Homology CDS 2687 3490 . + 0 ID=cds-WP_000553451.1;Parent=gene-AD12_RS08020;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AD12_RS08020;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 3635 4489 . + . ID=gene-AD12_RS08015;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AD12_RS08015;old_locus_tag=AD12_3116 NZ_JJLK01000071.1 Protein Homology CDS 3635 4489 . + 0 ID=cds-WP_001299515.1;Parent=gene-AD12_RS08015;Dbxref=GenBank:WP_001299515.1;Name=WP_001299515.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AD12_RS08015;product=alpha/beta hydrolase;protein_id=WP_001299515.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 4680 5960 . + . ID=gene-AD12_RS08010;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AD12_RS08010;old_locus_tag=AD12_3117 NZ_JJLK01000071.1 Protein Homology CDS 4680 5960 . + 0 ID=cds-WP_000982994.1;Parent=gene-AD12_RS08010;Dbxref=GenBank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AD12_RS08010;product=stationary phase inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 5952 7091 . - . ID=gene-AD12_RS08005;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AD12_RS08005;old_locus_tag=AD12_3118 NZ_JJLK01000071.1 Protein Homology CDS 5952 7091 . - 0 ID=cds-WP_000244193.1;Parent=gene-AD12_RS08005;Dbxref=GenBank:WP_000244193.1;Name=WP_000244193.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AD12_RS08005;product=3-phenylpropionate MFS transporter;protein_id=WP_000244193.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 7251 8141 . - . ID=gene-AD12_RS08000;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AD12_RS08000;old_locus_tag=AD12_3119 NZ_JJLK01000071.1 Protein Homology CDS 7251 8141 . - 0 ID=cds-WP_000423261.1;Parent=gene-AD12_RS08000;Dbxref=GenBank:WP_000423261.1;Name=WP_000423261.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417032.1;locus_tag=AD12_RS08000;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 8277 9638 . + . ID=gene-AD12_RS07995;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AD12_RS07995;old_locus_tag=AD12_3120 NZ_JJLK01000071.1 Protein Homology CDS 8277 9638 . + 0 ID=cds-WP_000211172.1;Parent=gene-AD12_RS07995;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AD12_RS07995;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 9635 10153 . + . ID=gene-AD12_RS07990;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AD12_RS07990;old_locus_tag=AD12_3121 NZ_JJLK01000071.1 Protein Homology CDS 9635 10153 . + 0 ID=cds-WP_001374469.1;Parent=gene-AD12_RS07990;Dbxref=GenBank:WP_001374469.1;Name=WP_001374469.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AD12_RS07990;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001374469.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 10153 10473 . + . ID=gene-AD12_RS07985;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AD12_RS07985;old_locus_tag=AD12_3122 NZ_JJLK01000071.1 Protein Homology CDS 10153 10473 . + 0 ID=cds-WP_001080102.1;Parent=gene-AD12_RS07985;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AD12_RS07985;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 10470 11282 . + . ID=gene-AD12_RS07980;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AD12_RS07980;old_locus_tag=AD12_3123 NZ_JJLK01000071.1 Protein Homology CDS 10470 11282 . + 0 ID=cds-WP_001281377.1;Parent=gene-AD12_RS07980;Dbxref=GenBank:WP_001281377.1;Name=WP_001281377.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=AD12_RS07980;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281377.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 11292 12494 . + . ID=gene-AD12_RS07975;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AD12_RS07975;old_locus_tag=AD12_3124 NZ_JJLK01000071.1 Protein Homology CDS 11292 12494 . + 0 ID=cds-WP_000660797.1;Parent=gene-AD12_RS07975;Dbxref=GenBank:WP_000660797.1;Name=WP_000660797.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AD12_RS07975;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660797.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 12591 13013 . + . ID=gene-AD12_RS07970;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AD12_RS07970;old_locus_tag=AD12_3125 NZ_JJLK01000071.1 Protein Homology CDS 12591 13013 . + 0 ID=cds-WP_001094726.1;Parent=gene-AD12_RS07970;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AD12_RS07970;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 13061 13933 . - . ID=gene-AD12_RS07965;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AD12_RS07965;old_locus_tag=AD12_3126 NZ_JJLK01000071.1 Protein Homology CDS 13061 13933 . - 0 ID=cds-WP_032286650.1;Parent=gene-AD12_RS07965;Dbxref=GenBank:WP_032286650.1;Name=WP_032286650.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AD12_RS07965;product=aldose 1-epimerase;protein_id=WP_032286650.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 13945 15039 . - . ID=gene-AD12_RS07960;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AD12_RS07960;old_locus_tag=AD12_3127 NZ_JJLK01000071.1 Protein Homology CDS 13945 15039 . - 0 ID=cds-WP_000700809.1;Parent=gene-AD12_RS07960;Dbxref=GenBank:WP_000700809.1;Name=WP_000700809.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AD12_RS07960;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700809.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 15072 16070 . - . ID=gene-AD12_RS07955;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AD12_RS07955;old_locus_tag=AD12_3128 NZ_JJLK01000071.1 Protein Homology CDS 15072 16070 . - 0 ID=cds-WP_001276663.1;Parent=gene-AD12_RS07955;Dbxref=GenBank:WP_001276663.1;Name=WP_001276663.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AD12_RS07955;product=ABC transporter permease;protein_id=WP_001276663.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 16095 17606 . - . ID=gene-AD12_RS07950;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AD12_RS07950;old_locus_tag=AD12_3129 NZ_JJLK01000071.1 Protein Homology CDS 16095 17606 . - 0 ID=cds-WP_032170109.1;Parent=gene-AD12_RS07950;Dbxref=GenBank:WP_032170109.1;Name=WP_032170109.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AD12_RS07950;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032170109.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 17629 18612 . - . ID=gene-AD12_RS07945;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AD12_RS07945;old_locus_tag=AD12_3130 NZ_JJLK01000071.1 Protein Homology CDS 17629 18612 . - 0 ID=cds-WP_001124909.1;Parent=gene-AD12_RS07945;Dbxref=GenBank:WP_001124909.1;Name=WP_001124909.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AD12_RS07945;product=substrate-binding domain-containing protein;protein_id=WP_001124909.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 18709 21990 . - . ID=gene-AD12_RS07940;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AD12_RS07940;old_locus_tag=AD12_3131 NZ_JJLK01000071.1 Protein Homology CDS 18709 21990 . - 0 ID=cds-WP_001356306.1;Parent=gene-AD12_RS07940;Dbxref=GenBank:WP_001356306.1;Name=WP_001356306.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AD12_RS07940;product=DUF5107 domain-containing protein;protein_id=WP_001356306.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 22108 23301 . + . ID=gene-AD12_RS07935;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AD12_RS07935;old_locus_tag=AD12_3132 NZ_JJLK01000071.1 Protein Homology CDS 22108 23301 . + 0 ID=cds-WP_001200780.1;Parent=gene-AD12_RS07935;Dbxref=GenBank:WP_001200780.1;Name=WP_001200780.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AD12_RS07935;product=ROK family protein;protein_id=WP_001200780.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 23365 24618 . - . ID=gene-AD12_RS07930;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AD12_RS07930;old_locus_tag=AD12_3133 NZ_JJLK01000071.1 Protein Homology CDS 23365 24618 . - 0 ID=cds-WP_000919159.1;Parent=gene-AD12_RS07930;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AD12_RS07930;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 24947 26137 . + . ID=gene-AD12_RS07925;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AD12_RS07925;old_locus_tag=AD12_3135 NZ_JJLK01000071.1 Protein Homology CDS 24947 26137 . + 0 ID=cds-WP_000883122.1;Parent=gene-AD12_RS07925;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AD12_RS07925;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 26182 26520 . - . ID=gene-AD12_RS07920;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AD12_RS07920;old_locus_tag=AD12_3136 NZ_JJLK01000071.1 Protein Homology CDS 26182 26520 . - 0 ID=cds-WP_000717694.1;Parent=gene-AD12_RS07920;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AD12_RS07920;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 26581 27915 . - . ID=gene-AD12_RS07915;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AD12_RS07915;old_locus_tag=AD12_3137 NZ_JJLK01000071.1 Protein Homology CDS 26581 27915 . - 0 ID=cds-WP_001298983.1;Parent=gene-AD12_RS07915;Dbxref=GenBank:WP_001298983.1;Name=WP_001298983.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AD12_RS07915;product=two-component system response regulator GlrR;protein_id=WP_001298983.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 27905 28618 . - . ID=gene-AD12_RS07910;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AD12_RS07910;old_locus_tag=AD12_3138 NZ_JJLK01000071.1 Protein Homology CDS 27905 28618 . - 0 ID=cds-WP_001215861.1;Parent=gene-AD12_RS07910;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AD12_RS07910;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 28783 30210 . - . ID=gene-AD12_RS07905;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AD12_RS07905;old_locus_tag=AD12_3139 NZ_JJLK01000071.1 Protein Homology CDS 28783 30210 . - 0 ID=cds-WP_001365683.1;Parent=gene-AD12_RS07905;Dbxref=GenBank:WP_001365683.1;Name=WP_001365683.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AD12_RS07905;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001365683.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 30768 34655 . - . ID=gene-AD12_RS07900;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AD12_RS07900;old_locus_tag=AD12_3140 NZ_JJLK01000071.1 Protein Homology CDS 30768 34655 . - 0 ID=cds-WP_000970134.1;Parent=gene-AD12_RS07900;Dbxref=GenBank:WP_000970134.1;Name=WP_000970134.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=AD12_RS07900;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970134.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 34913 36469 . + . ID=gene-AD12_RS07895;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AD12_RS07895;old_locus_tag=AD12_3142 NZ_JJLK01000071.1 Protein Homology CDS 34913 36469 . + 0 ID=cds-WP_000734212.1;Parent=gene-AD12_RS07895;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AD12_RS07895;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 36466 36969 . - . ID=gene-AD12_RS07890;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AD12_RS07890;old_locus_tag=AD12_3143 NZ_JJLK01000071.1 Protein Homology CDS 36466 36969 . - 0 ID=cds-WP_001297409.1;Parent=gene-AD12_RS07890;Dbxref=GenBank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AD12_RS07890;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 37027 37662 . - . ID=gene-AD12_RS07885;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AD12_RS07885;old_locus_tag=AD12_3144 NZ_JJLK01000071.1 Protein Homology CDS 37027 37662 . - 0 ID=cds-WP_000190655.1;Parent=gene-AD12_RS07885;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AD12_RS07885;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 37871 38719 . + . ID=gene-AD12_RS07880;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AD12_RS07880;old_locus_tag=AD12_3145 NZ_JJLK01000071.1 Protein Homology CDS 37871 38719 . + 0 ID=cds-WP_001013779.1;Parent=gene-AD12_RS07880;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AD12_RS07880;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 38775 39035 . + . ID=gene-AD12_RS07875;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AD12_RS07875;old_locus_tag=AD12_3146 NZ_JJLK01000071.1 Protein Homology CDS 38775 39035 . + 0 ID=cds-WP_001196283.1;Parent=gene-AD12_RS07875;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AD12_RS07875;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 39229 39309 . - . ID=gene-AD12_RS0124555;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AD12_RS0124555 NZ_JJLK01000071.1 Protein Homology CDS 39229 39309 . - 0 ID=cds-WP_000128776.1;Parent=gene-AD12_RS0124555;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AD12_RS0124555;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 39730 40110 . - . ID=gene-AD12_RS07870;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AD12_RS07870;old_locus_tag=AD12_3147 NZ_JJLK01000071.1 Protein Homology CDS 39730 40110 . - 0 ID=cds-WP_000986023.1;Parent=gene-AD12_RS07870;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AD12_RS07870;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 40110 40841 . - . ID=gene-AD12_RS07865;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AD12_RS07865;old_locus_tag=AD12_3148 NZ_JJLK01000071.1 Protein Homology CDS 40110 40841 . - 0 ID=cds-WP_001297412.1;Parent=gene-AD12_RS07865;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AD12_RS07865;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 40853 41581 . - . ID=gene-AD12_RS07860;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AD12_RS07860;old_locus_tag=AD12_3149 NZ_JJLK01000071.1 Protein Homology CDS 40853 41581 . - 0 ID=cds-WP_000399404.1;Parent=gene-AD12_RS07860;Dbxref=GenBank:WP_000399404.1;Name=WP_000399404.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AD12_RS07860;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 41593 42498 . - . ID=gene-AD12_RS07855;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AD12_RS07855;old_locus_tag=AD12_3150 NZ_JJLK01000071.1 Protein Homology CDS 41593 42498 . - 0 ID=cds-WP_000020749.1;Parent=gene-AD12_RS07855;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AD12_RS07855;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 42495 43175 . - . ID=gene-AD12_RS07850;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AD12_RS07850;old_locus_tag=AD12_3151 NZ_JJLK01000071.1 Protein Homology CDS 42495 43175 . - 0 ID=cds-WP_001068343.1;Parent=gene-AD12_RS07850;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AD12_RS07850;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 43447 44421 . - . ID=gene-AD12_RS07845;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AD12_RS07845;old_locus_tag=AD12_3152 NZ_JJLK01000071.1 Protein Homology CDS 43447 44421 . - 0 ID=cds-WP_000002541.1;Parent=gene-AD12_RS07845;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AD12_RS07845;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 44437 46236 . - . ID=gene-AD12_RS07840;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AD12_RS07840;old_locus_tag=AD12_3153 NZ_JJLK01000071.1 Protein Homology CDS 44437 46236 . - 0 ID=cds-WP_000790168.1;Parent=gene-AD12_RS07840;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AD12_RS07840;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 46434 46913 . - . ID=gene-AD12_RS07835;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AD12_RS07835;old_locus_tag=AD12_3154 NZ_JJLK01000071.1 Protein Homology CDS 46434 46913 . - 0 ID=cds-WP_000589068.1;Parent=gene-AD12_RS07835;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AD12_RS07835;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 46910 47866 . - . ID=gene-AD12_RS07830;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AD12_RS07830;old_locus_tag=AD12_3155 NZ_JJLK01000071.1 Protein Homology CDS 46910 47866 . - 0 ID=cds-WP_000812053.1;Parent=gene-AD12_RS07830;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AD12_RS07830;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 47866 48516 . - . ID=gene-AD12_RS07825;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AD12_RS07825;old_locus_tag=AD12_3156 NZ_JJLK01000071.1 Protein Homology CDS 47866 48516 . - 0 ID=cds-WP_001168459.1;Parent=gene-AD12_RS07825;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AD12_RS07825;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 48549 49124 . - . ID=gene-AD12_RS07820;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AD12_RS07820;old_locus_tag=AD12_3157 NZ_JJLK01000071.1 Protein Homology CDS 48549 49124 . - 0 ID=cds-WP_001295364.1;Parent=gene-AD12_RS07820;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AD12_RS07820;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 49121 49276 . - . ID=gene-AD12_RS28790;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AD12_RS28790 NZ_JJLK01000071.1 Protein Homology CDS 49121 49276 . - 0 ID=cds-WP_001303621.1;Parent=gene-AD12_RS28790;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AD12_RS28790;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 49532 51154 . + . ID=gene-AD12_RS07815;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AD12_RS07815;old_locus_tag=AD12_3158 NZ_JJLK01000071.1 Protein Homology CDS 49532 51154 . + 0 ID=cds-WP_001094499.1;Parent=gene-AD12_RS07815;Dbxref=GenBank:WP_001094499.1;Name=WP_001094499.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AD12_RS07815;product=L-aspartate oxidase;protein_id=WP_001094499.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 51139 51876 . - . ID=gene-AD12_RS07810;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AD12_RS07810;old_locus_tag=AD12_3159 NZ_JJLK01000071.1 Protein Homology CDS 51139 51876 . - 0 ID=cds-WP_001356308.1;Parent=gene-AD12_RS07810;Dbxref=GenBank:WP_001356308.1;Name=WP_001356308.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AD12_RS07810;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001356308.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 52008 53342 . + . ID=gene-AD12_RS07805;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AD12_RS07805;old_locus_tag=AD12_3160 NZ_JJLK01000071.1 Protein Homology CDS 52008 53342 . + 0 ID=cds-WP_000219193.1;Parent=gene-AD12_RS07805;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AD12_RS07805;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 53551 54432 . - . ID=gene-AD12_RS07800;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AD12_RS07800;old_locus_tag=AD12_3161 NZ_JJLK01000071.1 Protein Homology CDS 53551 54432 . - 0 ID=cds-WP_000365855.1;Parent=gene-AD12_RS07800;Dbxref=GenBank:WP_000365855.1;Name=WP_000365855.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AD12_RS07800;product=LysR family transcriptional regulator;protein_id=WP_000365855.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 54535 55122 . + . ID=gene-AD12_RS07795;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AD12_RS07795;old_locus_tag=AD12_3162 NZ_JJLK01000071.1 Protein Homology CDS 54535 55122 . + 0 ID=cds-WP_000189203.1;Parent=gene-AD12_RS07795;Dbxref=GenBank:WP_000189203.1;Name=WP_000189203.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AD12_RS07795;product=cysteine/O-acetylserine transporter;protein_id=WP_000189203.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 55178 55561 . - . ID=gene-AD12_RS07790;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AD12_RS07790;old_locus_tag=AD12_3163 NZ_JJLK01000071.1 Protein Homology CDS 55178 55561 . - 0 ID=cds-WP_000627807.1;Parent=gene-AD12_RS07790;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AD12_RS07790;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 55866 56555 . + . ID=gene-AD12_RS07785;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AD12_RS07785;old_locus_tag=AD12_3164 NZ_JJLK01000071.1 Protein Homology CDS 55866 56555 . + 0 ID=cds-WP_001262716.1;Parent=gene-AD12_RS07785;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AD12_RS07785;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 56603 57640 . - . ID=gene-AD12_RS07780;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AD12_RS07780;old_locus_tag=AD12_3165 NZ_JJLK01000071.1 Protein Homology CDS 56603 57640 . - 0 ID=cds-WP_000997403.1;Parent=gene-AD12_RS07780;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AD12_RS07780;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 57847 58266 . + . ID=gene-AD12_RS07775;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AD12_RS07775;old_locus_tag=AD12_3166 NZ_JJLK01000071.1 Protein Homology CDS 57847 58266 . + 0 ID=cds-WP_001098726.1;Parent=gene-AD12_RS07775;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AD12_RS07775;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 58335 59033 . + . ID=gene-AD12_RS07770;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AD12_RS07770;old_locus_tag=AD12_3167 NZ_JJLK01000071.1 Protein Homology CDS 58335 59033 . + 0 ID=cds-WP_000138184.1;Parent=gene-AD12_RS07770;Dbxref=GenBank:WP_000138184.1;Name=WP_000138184.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311476.2;locus_tag=AD12_RS07770;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000138184.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 59065 61725 . + . ID=gene-AD12_RS07765;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AD12_RS07765;old_locus_tag=AD12_3168 NZ_JJLK01000071.1 Protein Homology CDS 59065 61725 . + 0 ID=cds-WP_000082969.1;Parent=gene-AD12_RS07765;Dbxref=GenBank:WP_000082969.1;Name=WP_000082969.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AD12_RS07765;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000082969.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 61839 63194 . + . ID=gene-AD12_RS07760;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AD12_RS07760;old_locus_tag=AD12_3169 NZ_JJLK01000071.1 Protein Homology CDS 61839 63194 . + 0 ID=cds-WP_000949265.1;Parent=gene-AD12_RS07760;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AD12_RS07760;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 63240 63563 . + . ID=gene-AD12_RS07755;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AD12_RS07755;old_locus_tag=AD12_3170 NZ_JJLK01000071.1 Protein Homology CDS 63240 63563 . + 0 ID=cds-WP_001300818.1;Parent=gene-AD12_RS07755;Dbxref=GenBank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AD12_RS07755;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 63560 64858 . - . ID=gene-AD12_RS07750;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD12_RS07750;old_locus_tag=AD12_3171 NZ_JJLK01000071.1 Protein Homology CDS 63560 64858 . - 0 ID=cds-WP_000841103.1;Parent=gene-AD12_RS07750;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD12_RS07750;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLK01000071.1 RefSeq gene 65184 65299 . - . ID=gene-AD12_RS07745;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS07745;old_locus_tag=AD12_3173 NZ_JJLK01000071.1 cmsearch rRNA 65184 65299 . - . ID=rna-AD12_RS07745;Parent=gene-AD12_RS07745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS07745;product=5S ribosomal RNA NZ_JJLK01000071.1 cmsearch exon 65184 65299 . - . ID=exon-AD12_RS07745-1;Parent=rna-AD12_RS07745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS07745;product=5S ribosomal RNA NZ_JJLK01000071.1 RefSeq gene 65395 65607 . - . ID=gene-AD12_RS0124590;Name=AD12_RS0124590;end_range=65607,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0124590;partial=true NZ_JJLK01000071.1 cmsearch rRNA 65395 65607 . - . ID=rna-AD12_RS0124590;Parent=gene-AD12_RS0124590;Dbxref=RFAM:RF02541;end_range=65607,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124590;partial=true;product=23S ribosomal RNA NZ_JJLK01000071.1 cmsearch exon 65395 65607 . - . ID=exon-AD12_RS0124590-1;Parent=rna-AD12_RS0124590;Dbxref=RFAM:RF02541;end_range=65607,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124590;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLK01000072.1 1 848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000072.1 RefSeq region 1 848 . + . ID=NZ_JJLK01000072.1:1..848;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000072.1 RefSeq gene 1 254 . - . ID=gene-AD12_RS0124595;Name=AD12_RS0124595;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0124595;partial=true;start_range=.,1 NZ_JJLK01000072.1 cmsearch rRNA 1 254 . - . ID=rna-AD12_RS0124595;Parent=gene-AD12_RS0124595;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124595;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000072.1 cmsearch exon 1 254 . - . ID=exon-AD12_RS0124595-1;Parent=rna-AD12_RS0124595;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124595;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000072.1 RefSeq gene 448 523 . - . ID=gene-AD12_RS07740;Name=AD12_RS07740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07740;old_locus_tag=AD12_3174 NZ_JJLK01000072.1 tRNAscan-SE tRNA 448 523 . - . ID=rna-AD12_RS07740;Parent=gene-AD12_RS07740;anticodon=(pos:complement(487..489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07740;product=tRNA-Glu NZ_JJLK01000072.1 tRNAscan-SE exon 448 523 . - . ID=exon-AD12_RS07740-1;Parent=rna-AD12_RS07740;anticodon=(pos:complement(487..489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07740;product=tRNA-Glu NZ_JJLK01000072.1 RefSeq gene 695 848 . - . ID=gene-AD12_RS0124600;Name=AD12_RS0124600;end_range=848,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0124600;partial=true NZ_JJLK01000072.1 cmsearch rRNA 695 848 . - . ID=rna-AD12_RS0124600;Parent=gene-AD12_RS0124600;Dbxref=RFAM:RF00177;end_range=848,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124600;partial=true;product=16S ribosomal RNA NZ_JJLK01000072.1 cmsearch exon 695 848 . - . ID=exon-AD12_RS0124600-1;Parent=rna-AD12_RS0124600;Dbxref=RFAM:RF00177;end_range=848,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124600;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLK01000073.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000073.1 RefSeq region 1 534 . + . ID=NZ_JJLK01000073.1:1..534;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000073.1 RefSeq gene 1 534 . + . ID=gene-AD12_RS0124605;Name=AD12_RS0124605;end_range=534,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0124605;partial=true;start_range=.,1 NZ_JJLK01000073.1 cmsearch rRNA 1 534 . + . ID=rna-AD12_RS0124605;Parent=gene-AD12_RS0124605;Dbxref=RFAM:RF00177;end_range=534,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124605;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLK01000073.1 cmsearch exon 1 534 . + . ID=exon-AD12_RS0124605-1;Parent=rna-AD12_RS0124605;Dbxref=RFAM:RF00177;end_range=534,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124605;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLK01000074.1 1 28820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000074.1 RefSeq region 1 28820 . + . ID=NZ_JJLK01000074.1:1..28820;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000074.1 RefSeq gene 1 342 . - . ID=gene-AD12_RS0124610;Name=AD12_RS0124610;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0124610;partial=true;start_range=.,1 NZ_JJLK01000074.1 cmsearch rRNA 1 342 . - . ID=rna-AD12_RS0124610;Parent=gene-AD12_RS0124610;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124610;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLK01000074.1 cmsearch exon 1 342 . - . ID=exon-AD12_RS0124610-1;Parent=rna-AD12_RS0124610;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0124610;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLK01000074.1 RefSeq gene 786 3359 . - . ID=gene-AD12_RS07735;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AD12_RS07735;old_locus_tag=AD12_3176 NZ_JJLK01000074.1 Protein Homology CDS 786 3359 . - 0 ID=cds-WP_001235102.1;Parent=gene-AD12_RS07735;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AD12_RS07735;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 3489 4220 . - . ID=gene-AD12_RS07730;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AD12_RS07730;old_locus_tag=AD12_3177 NZ_JJLK01000074.1 Protein Homology CDS 3489 4220 . - 0 ID=cds-WP_000040129.1;Parent=gene-AD12_RS07730;Dbxref=GenBank:WP_000040129.1;Name=WP_000040129.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311483.1;locus_tag=AD12_RS07730;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040129.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 4217 5197 . - . ID=gene-AD12_RS07725;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AD12_RS07725;old_locus_tag=AD12_3178 NZ_JJLK01000074.1 Protein Homology CDS 4217 5197 . - 0 ID=cds-WP_000079100.1;Parent=gene-AD12_RS07725;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AD12_RS07725;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 5332 6069 . + . ID=gene-AD12_RS07720;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AD12_RS07720;old_locus_tag=AD12_3179 NZ_JJLK01000074.1 Protein Homology CDS 5332 6069 . + 0 ID=cds-WP_000197686.1;Parent=gene-AD12_RS07720;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AD12_RS07720;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 6340 6681 . + . ID=gene-AD12_RS07715;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AD12_RS07715;old_locus_tag=AD12_3180 NZ_JJLK01000074.1 Protein Homology CDS 6340 6681 . + 0 ID=cds-WP_000178456.1;Parent=gene-AD12_RS07715;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AD12_RS07715;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JJLK01000074.1 cmsearch sequence_feature 6784 6909 . + . ID=id-NZ_JJLK01000074.1:6784..6909;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000074.1 RefSeq gene 6785 6832 . + . ID=gene-AD12_RS28795;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AD12_RS28795 NZ_JJLK01000074.1 Protein Homology CDS 6785 6832 . + 0 ID=cds-WP_001700969.1;Parent=gene-AD12_RS28795;Dbxref=GenBank:WP_001700969.1;Name=WP_001700969.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=AD12_RS28795;product=pheA operon leader peptide PheL;protein_id=WP_001700969.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 6931 8091 . + . ID=gene-AD12_RS07710;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AD12_RS07710;old_locus_tag=AD12_3181 NZ_JJLK01000074.1 Protein Homology CDS 6931 8091 . + 0 ID=cds-WP_000200101.1;Parent=gene-AD12_RS07710;Dbxref=GenBank:WP_000200101.1;Name=WP_000200101.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AD12_RS07710;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200101.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 8134 9255 . - . ID=gene-AD12_RS07705;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AD12_RS07705;old_locus_tag=AD12_3182 NZ_JJLK01000074.1 Protein Homology CDS 8134 9255 . - 0 ID=cds-WP_000225221.1;Parent=gene-AD12_RS07705;Dbxref=GenBank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AD12_RS07705;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 9266 10336 . - . ID=gene-AD12_RS07700;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AD12_RS07700;old_locus_tag=AD12_3183 NZ_JJLK01000074.1 Protein Homology CDS 9266 10336 . - 0 ID=cds-WP_001168045.1;Parent=gene-AD12_RS07700;Dbxref=GenBank:WP_001168045.1;Name=WP_001168045.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311491.1;locus_tag=AD12_RS07700;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168045.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 10546 10911 . + . ID=gene-AD12_RS07695;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AD12_RS07695;old_locus_tag=AD12_3184 NZ_JJLK01000074.1 Protein Homology CDS 10546 10911 . + 0 ID=cds-WP_000976004.1;Parent=gene-AD12_RS07695;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AD12_RS07695;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 11061 11579 . + . ID=gene-AD12_RS07690;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AD12_RS07690;old_locus_tag=AD12_3185 NZ_JJLK01000074.1 Protein Homology CDS 11061 11579 . + 0 ID=cds-WP_001212391.1;Parent=gene-AD12_RS07690;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AD12_RS07690;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 11569 12795 . + . ID=gene-AD12_RS0124620;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AD12_RS0124620 NZ_JJLK01000074.1 Protein Homology CDS 11569 12795 . + 0 ID=cds-WP_000969010.1;Parent=gene-AD12_RS0124620;Dbxref=GenBank:WP_000969010.1;Name=WP_000969010.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AD12_RS0124620;product=diguanylate cyclase DgcN;protein_id=WP_000969010.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 12811 13293 . + . ID=gene-AD12_RS0124625;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AD12_RS0124625;old_locus_tag=AD12_3187 NZ_JJLK01000074.1 Protein Homology CDS 12811 13293 . + 0 ID=cds-WP_000589828.1;Parent=gene-AD12_RS0124625;Dbxref=GenBank:WP_000589828.1;Name=WP_000589828.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311495.1;locus_tag=AD12_RS0124625;product=OmpA family protein;protein_id=WP_000589828.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 13369 13716 . - . ID=gene-AD12_RS07685;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AD12_RS07685;old_locus_tag=AD12_3188 NZ_JJLK01000074.1 Protein Homology CDS 13369 13716 . - 0 ID=cds-WP_000065253.1;Parent=gene-AD12_RS07685;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AD12_RS07685;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 13758 14525 . - . ID=gene-AD12_RS07680;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AD12_RS07680;old_locus_tag=AD12_3189 NZ_JJLK01000074.1 Protein Homology CDS 13758 14525 . - 0 ID=cds-WP_000264777.1;Parent=gene-AD12_RS07680;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AD12_RS07680;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 14556 15104 . - . ID=gene-AD12_RS07675;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AD12_RS07675;old_locus_tag=AD12_3190 NZ_JJLK01000074.1 Protein Homology CDS 14556 15104 . - 0 ID=cds-WP_000043335.1;Parent=gene-AD12_RS07675;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AD12_RS07675;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 15123 15371 . - . ID=gene-AD12_RS07670;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AD12_RS07670;old_locus_tag=AD12_3191 NZ_JJLK01000074.1 Protein Homology CDS 15123 15371 . - 0 ID=cds-WP_000256450.1;Parent=gene-AD12_RS07670;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AD12_RS07670;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 15508 16869 . - . ID=gene-AD12_RS07665;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AD12_RS07665;old_locus_tag=AD12_3192 NZ_JJLK01000074.1 Protein Homology CDS 15508 16869 . - 0 ID=cds-WP_000460035.1;Parent=gene-AD12_RS07665;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AD12_RS07665;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 17036 17827 . + . ID=gene-AD12_RS07660;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AD12_RS07660;old_locus_tag=AD12_3193 NZ_JJLK01000074.1 Protein Homology CDS 17036 17827 . + 0 ID=cds-WP_001338897.1;Parent=gene-AD12_RS07660;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AD12_RS07660;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 17848 19134 . + . ID=gene-AD12_RS07655;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AD12_RS07655;old_locus_tag=AD12_3194 NZ_JJLK01000074.1 Protein Homology CDS 17848 19134 . + 0 ID=cds-WP_010723175.1;Parent=gene-AD12_RS07655;Dbxref=GenBank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AD12_RS07655;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 19189 19782 . - . ID=gene-AD12_RS07650;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AD12_RS07650;old_locus_tag=AD12_3195 NZ_JJLK01000074.1 Protein Homology CDS 19189 19782 . - 0 ID=cds-WP_001296310.1;Parent=gene-AD12_RS07650;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AD12_RS07650;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 19905 20783 . + . ID=gene-AD12_RS07645;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AD12_RS07645;old_locus_tag=AD12_3197 NZ_JJLK01000074.1 Protein Homology CDS 19905 20783 . + 0 ID=cds-WP_001059169.1;Parent=gene-AD12_RS07645;Dbxref=GenBank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AD12_RS07645;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 20869 22530 . + . ID=gene-AD12_RS07640;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AD12_RS07640;old_locus_tag=AD12_3198 NZ_JJLK01000074.1 Protein Homology CDS 20869 22530 . + 0 ID=cds-WP_000880910.1;Parent=gene-AD12_RS07640;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AD12_RS07640;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 22679 23020 . + . ID=gene-AD12_RS07635;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AD12_RS07635;old_locus_tag=AD12_3199 NZ_JJLK01000074.1 Protein Homology CDS 22679 23020 . + 0 ID=cds-WP_001203437.1;Parent=gene-AD12_RS07635;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AD12_RS07635;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 23082 23372 . - . ID=gene-AD12_RS07630;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AD12_RS07630;old_locus_tag=AD12_3200 NZ_JJLK01000074.1 Protein Homology CDS 23082 23372 . - 0 ID=cds-WP_001117838.1;Parent=gene-AD12_RS07630;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AD12_RS07630;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 23362 23799 . - . ID=gene-AD12_RS07625;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AD12_RS07625;old_locus_tag=AD12_3201 NZ_JJLK01000074.1 Protein Homology CDS 23362 23799 . - 0 ID=cds-WP_001300750.1;Parent=gene-AD12_RS07625;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AD12_RS07625;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 23970 24452 . + . ID=gene-AD12_RS07620;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AD12_RS07620;old_locus_tag=AD12_3202 NZ_JJLK01000074.1 Protein Homology CDS 23970 24452 . + 0 ID=cds-WP_000162574.1;Parent=gene-AD12_RS07620;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AD12_RS07620;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 24667 25029 . + . ID=gene-AD12_RS25815;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AD12_RS25815 NZ_JJLK01000074.1 cmsearch tmRNA 24667 25029 . + . ID=rna-AD12_RS25815;Parent=gene-AD12_RS25815;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25815;product=transfer-messenger RNA NZ_JJLK01000074.1 cmsearch exon 24667 25029 . + . ID=exon-AD12_RS25815-1;Parent=rna-AD12_RS25815;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25815;product=transfer-messenger RNA NZ_JJLK01000074.1 RefSeq gene 25214 26410 . + . ID=gene-AD12_RS07615;Name=AD12_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07615;old_locus_tag=AD12_3203 NZ_JJLK01000074.1 Protein Homology CDS 25214 26410 . + 0 ID=cds-WP_000124719.1;Parent=gene-AD12_RS07615;Dbxref=GenBank:WP_000124719.1;Name=WP_000124719.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124719.1;locus_tag=AD12_RS07615;product=integrase domain-containing protein;protein_id=WP_000124719.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 26407 28110 . - . ID=gene-AD12_RS07610;Name=AD12_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07610;old_locus_tag=AD12_3204 NZ_JJLK01000074.1 Protein Homology CDS 26407 28110 . - 0 ID=cds-WP_000486482.1;Parent=gene-AD12_RS07610;Dbxref=GenBank:WP_000486482.1;Name=WP_000486482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000486482.1;locus_tag=AD12_RS07610;product=hypothetical protein;protein_id=WP_000486482.1;transl_table=11 NZ_JJLK01000074.1 RefSeq gene 28589 28820 . - . ID=gene-AD12_RS07605;Name=AD12_RS07605;end_range=28820,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07605;old_locus_tag=AD12_3206;partial=true NZ_JJLK01000074.1 Protein Homology CDS 28589 28820 . - 1 ID=cds-WP_032241012.1;Parent=gene-AD12_RS07605;Dbxref=GenBank:WP_032241012.1;Name=WP_032241012.1;end_range=28820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774583.1;locus_tag=AD12_RS07605;partial=true;product=phage polarity suppression protein;protein_id=WP_032241012.1;transl_table=11 ##sequence-region NZ_JJLK01000075.1 1 388349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000075.1 RefSeq region 1 388349 . + . ID=NZ_JJLK01000075.1:1..388349;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000075.1 RefSeq gene 659 985 . - . ID=gene-AD12_RS29920;Name=AD12_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29920;old_locus_tag=AD12_3208 NZ_JJLK01000075.1 Protein Homology CDS 659 985 . - 0 ID=cds-WP_000444409.1;Parent=gene-AD12_RS29920;Dbxref=GenBank:WP_000444409.1;Name=WP_000444409.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=AD12_RS29920;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000444409.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 1131 3914 . - . ID=gene-AD12_RS0124630;Name=ypjA;gbkey=Gene;gene=ypjA;gene_biotype=pseudogene;locus_tag=AD12_RS0124630;old_locus_tag=AD12_3209;partial=true;pseudo=true;start_range=.,1131 NZ_JJLK01000075.1 Protein Homology CDS 1131 3914 . - 0 ID=cds-AD12_RS0124630;Parent=gene-AD12_RS0124630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ypjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AD12_RS0124630;partial=true;product=adhesin-like autotransporter YpjA/EhaD;pseudo=true;start_range=.,1131;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 3979 4098 . - . ID=gene-AD12_RS27105;Name=AD12_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS27105;old_locus_tag=AD12_3211 NZ_JJLK01000075.1 Protein Homology CDS 3979 4098 . - 0 ID=cds-WP_000927517.1;Parent=gene-AD12_RS27105;Dbxref=GenBank:WP_000927517.1;Name=WP_000927517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD12_RS27105;product=hypothetical protein;protein_id=WP_000927517.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 4322 4489 . - . ID=gene-AD12_RS27115;Name=AD12_RS27115;end_range=4489,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27115;partial=true;pseudo=true;start_range=.,4322 NZ_JJLK01000075.1 Protein Homology CDS 4322 4489 . - 0 ID=cds-AD12_RS27115;Parent=gene-AD12_RS27115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=4489,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239934.1;locus_tag=AD12_RS27115;partial=true;product=recombinase family protein;pseudo=true;start_range=.,4322;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 4827 6200 . - . ID=gene-AD12_RS07600;Name=ypjCB;gbkey=Gene;gene=ypjCB;gene_biotype=protein_coding;locus_tag=AD12_RS07600;old_locus_tag=AD12_3213 NZ_JJLK01000075.1 Protein Homology CDS 4827 6200 . - 0 ID=cds-WP_000961357.1;Parent=gene-AD12_RS07600;Dbxref=GenBank:WP_000961357.1;Name=WP_000961357.1;gbkey=CDS;gene=ypjCB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=AD12_RS07600;product=YpjCB family protein;protein_id=WP_000961357.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 6952 7027 . - . ID=gene-AD12_RS07595;Name=AD12_RS07595;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07595;old_locus_tag=AD12_3214 NZ_JJLK01000075.1 tRNAscan-SE tRNA 6952 7027 . - . ID=rna-AD12_RS07595;Parent=gene-AD12_RS07595;anticodon=(pos:complement(6992..6994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07595;product=tRNA-Ile NZ_JJLK01000075.1 tRNAscan-SE exon 6952 7027 . - . ID=exon-AD12_RS07595-1;Parent=rna-AD12_RS07595;anticodon=(pos:complement(6992..6994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07595;product=tRNA-Ile NZ_JJLK01000075.1 RefSeq pseudogene 7587 9839 . + . ID=gene-AD12_RS07590;Name=AD12_RS07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS07590;old_locus_tag=AD12_3215;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 7587 9839 . + 0 ID=cds-AD12_RS07590;Parent=gene-AD12_RS07590;Note=internal stop;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AD12_RS07590;product=alpha amylase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 10175 11152 . + . ID=gene-AD12_RS07585;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AD12_RS07585;old_locus_tag=AD12_3217 NZ_JJLK01000075.1 Protein Homology CDS 10175 11152 . + 0 ID=cds-WP_001315804.1;Parent=gene-AD12_RS07585;Dbxref=GenBank:WP_001315804.1;Name=WP_001315804.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AD12_RS07585;product=glutarate dioxygenase GlaH;protein_id=WP_001315804.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 11172 12440 . + . ID=gene-AD12_RS07580;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AD12_RS07580;old_locus_tag=AD12_3218 NZ_JJLK01000075.1 Protein Homology CDS 11172 12440 . + 0 ID=cds-WP_000271984.1;Parent=gene-AD12_RS07580;Dbxref=GenBank:WP_000271984.1;Name=WP_000271984.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AD12_RS07580;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271984.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 12463 13911 . + . ID=gene-AD12_RS07575;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AD12_RS07575;old_locus_tag=AD12_3219 NZ_JJLK01000075.1 Protein Homology CDS 12463 13911 . + 0 ID=cds-WP_000772854.1;Parent=gene-AD12_RS07575;Dbxref=GenBank:WP_000772854.1;Name=WP_000772854.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AD12_RS07575;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772854.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 13925 15205 . + . ID=gene-AD12_RS07570;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AD12_RS07570;old_locus_tag=AD12_3220 NZ_JJLK01000075.1 Protein Homology CDS 13925 15205 . + 0 ID=cds-WP_032173520.1;Parent=gene-AD12_RS07570;Dbxref=GenBank:WP_032173520.1;Name=WP_032173520.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311550.1;locus_tag=AD12_RS07570;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032173520.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 15443 16843 . + . ID=gene-AD12_RS07565;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AD12_RS07565;old_locus_tag=AD12_3221 NZ_JJLK01000075.1 Protein Homology CDS 15443 16843 . + 0 ID=cds-WP_001295173.1;Parent=gene-AD12_RS07565;Dbxref=GenBank:WP_001295173.1;Name=WP_001295173.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=AD12_RS07565;product=GABA permease;protein_id=WP_001295173.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 16864 17526 . + . ID=gene-AD12_RS07560;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AD12_RS07560;old_locus_tag=AD12_3222 NZ_JJLK01000075.1 Protein Homology CDS 16864 17526 . + 0 ID=cds-WP_000156811.1;Parent=gene-AD12_RS07560;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AD12_RS07560;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 17527 17976 . - . ID=gene-AD12_RS07555;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AD12_RS07555;old_locus_tag=AD12_3223 NZ_JJLK01000075.1 Protein Homology CDS 17527 17976 . - 0 ID=cds-WP_000522415.1;Parent=gene-AD12_RS07555;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AD12_RS07555;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 18060 18218 . - . ID=gene-AD12_RS07550;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AD12_RS07550;old_locus_tag=AD12_3224 NZ_JJLK01000075.1 Protein Homology CDS 18060 18218 . - 0 ID=cds-WP_000508177.1;Parent=gene-AD12_RS07550;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AD12_RS07550;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 18401 18700 . + . ID=gene-AD12_RS07545;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AD12_RS07545;old_locus_tag=AD12_3225 NZ_JJLK01000075.1 Protein Homology CDS 18401 18700 . + 0 ID=cds-WP_000137280.1;Parent=gene-AD12_RS07545;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AD12_RS07545;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 18710 19234 . + . ID=gene-AD12_RS07540;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AD12_RS07540;old_locus_tag=AD12_3226 NZ_JJLK01000075.1 Protein Homology CDS 18710 19234 . + 0 ID=cds-WP_001229444.1;Parent=gene-AD12_RS07540;Dbxref=GenBank:WP_001229444.1;Name=WP_001229444.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AD12_RS07540;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229444.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 19281 19685 . - . ID=gene-AD12_RS07535;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AD12_RS07535;old_locus_tag=AD12_3227 NZ_JJLK01000075.1 Protein Homology CDS 19281 19685 . - 0 ID=cds-WP_000115383.1;Parent=gene-AD12_RS07535;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AD12_RS07535;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 20353 20802 . + . ID=gene-AD12_RS0124650;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AD12_RS0124650;old_locus_tag=AD12_3228 NZ_JJLK01000075.1 Protein Homology CDS 20353 20802 . + 0 ID=cds-WP_000492656.1;Parent=gene-AD12_RS0124650;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AD12_RS0124650;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 20839 21183 . - . ID=gene-AD12_RS07530;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AD12_RS07530;old_locus_tag=AD12_3229 NZ_JJLK01000075.1 Protein Homology CDS 20839 21183 . - 0 ID=cds-WP_000281320.1;Parent=gene-AD12_RS07530;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AD12_RS07530;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 21335 21664 . + . ID=gene-AD12_RS07525;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AD12_RS07525;old_locus_tag=AD12_3230 NZ_JJLK01000075.1 Protein Homology CDS 21335 21664 . + 0 ID=cds-WP_001295174.1;Parent=gene-AD12_RS07525;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AD12_RS07525;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 21912 22157 . + . ID=gene-AD12_RS07520;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AD12_RS07520;old_locus_tag=AD12_3231 NZ_JJLK01000075.1 Protein Homology CDS 21912 22157 . + 0 ID=cds-WP_001223227.1;Parent=gene-AD12_RS07520;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AD12_RS07520;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 22154 22564 . + . ID=gene-AD12_RS07515;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AD12_RS07515;old_locus_tag=AD12_3232 NZ_JJLK01000075.1 Protein Homology CDS 22154 22564 . + 0 ID=cds-WP_000080944.1;Parent=gene-AD12_RS07515;Dbxref=GenBank:WP_000080944.1;Name=WP_000080944.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AD12_RS07515;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080944.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 22537 24681 . + . ID=gene-AD12_RS07510;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AD12_RS07510;old_locus_tag=AD12_3233 NZ_JJLK01000075.1 Protein Homology CDS 22537 24681 . + 0 ID=cds-WP_000246517.1;Parent=gene-AD12_RS07510;Dbxref=GenBank:WP_000246517.1;Name=WP_000246517.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AD12_RS07510;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246517.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 24691 25650 . + . ID=gene-AD12_RS07505;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AD12_RS07505;old_locus_tag=AD12_3234 NZ_JJLK01000075.1 Protein Homology CDS 24691 25650 . + 0 ID=cds-WP_000777969.1;Parent=gene-AD12_RS07505;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AD12_RS07505;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 26005 27207 . + . ID=gene-AD12_RS07500;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AD12_RS07500;old_locus_tag=AD12_3235 NZ_JJLK01000075.1 Protein Homology CDS 26005 27207 . + 0 ID=cds-WP_000985494.1;Parent=gene-AD12_RS07500;Dbxref=GenBank:WP_000985494.1;Name=WP_000985494.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AD12_RS07500;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 27200 28264 . + . ID=gene-AD12_RS07495;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AD12_RS07495;old_locus_tag=AD12_3236 NZ_JJLK01000075.1 Protein Homology CDS 27200 28264 . + 0 ID=cds-WP_000774978.1;Parent=gene-AD12_RS07495;Dbxref=GenBank:WP_000774978.1;Name=WP_000774978.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311568.1;locus_tag=AD12_RS07495;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774978.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 28322 29314 . + . ID=gene-AD12_RS07490;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AD12_RS07490;old_locus_tag=AD12_3237 NZ_JJLK01000075.1 Protein Homology CDS 28322 29314 . + 0 ID=cds-WP_001216521.1;Parent=gene-AD12_RS07490;Dbxref=GenBank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AD12_RS07490;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 29506 30690 . + . ID=gene-AD12_RS07485;Name=AD12_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07485;old_locus_tag=AD12_3239 NZ_JJLK01000075.1 Protein Homology CDS 29506 30690 . + 0 ID=cds-WP_000165699.1;Parent=gene-AD12_RS07485;Dbxref=GenBank:WP_000165699.1;Name=WP_000165699.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AD12_RS07485;product=MFS transporter;protein_id=WP_000165699.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 30814 31551 . + . ID=gene-AD12_RS07480;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AD12_RS07480;old_locus_tag=AD12_3240 NZ_JJLK01000075.1 Protein Homology CDS 30814 31551 . + 0 ID=cds-WP_000445658.1;Parent=gene-AD12_RS07480;Dbxref=GenBank:WP_000445658.1;Name=WP_000445658.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311571.1;locus_tag=AD12_RS07480;product=L-valine exporter subunit YgaZ;protein_id=WP_000445658.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 31541 31876 . + . ID=gene-AD12_RS07475;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AD12_RS07475;old_locus_tag=AD12_3241 NZ_JJLK01000075.1 Protein Homology CDS 31541 31876 . + 0 ID=cds-WP_000119763.1;Parent=gene-AD12_RS07475;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AD12_RS07475;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 31967 32497 . + . ID=gene-AD12_RS07470;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AD12_RS07470;old_locus_tag=AD12_3242 NZ_JJLK01000075.1 Protein Homology CDS 31967 32497 . + 0 ID=cds-WP_000378442.1;Parent=gene-AD12_RS07470;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AD12_RS07470;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 32624 33796 . + . ID=gene-AD12_RS07465;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AD12_RS07465;old_locus_tag=AD12_3244 NZ_JJLK01000075.1 Protein Homology CDS 32624 33796 . + 0 ID=cds-WP_032286654.1;Parent=gene-AD12_RS07465;Dbxref=GenBank:WP_032286654.1;Name=WP_032286654.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311574.1;locus_tag=AD12_RS07465;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_032286654.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 33813 35351 . + . ID=gene-AD12_RS07460;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AD12_RS07460;old_locus_tag=AD12_3245 NZ_JJLK01000075.1 Protein Homology CDS 33813 35351 . + 0 ID=cds-WP_001295176.1;Parent=gene-AD12_RS07460;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AD12_RS07460;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 35415 35930 . - . ID=gene-AD12_RS07455;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AD12_RS07455;old_locus_tag=AD12_3246 NZ_JJLK01000075.1 Protein Homology CDS 35415 35930 . - 0 ID=cds-WP_001130207.1;Parent=gene-AD12_RS07455;Dbxref=GenBank:WP_001130207.1;Name=WP_001130207.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AD12_RS07455;product=S-ribosylhomocysteine lyase;protein_id=WP_001130207.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 36080 37636 . - . ID=gene-AD12_RS07450;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AD12_RS07450;old_locus_tag=AD12_3247 NZ_JJLK01000075.1 Protein Homology CDS 36080 37636 . - 0 ID=cds-WP_000611802.1;Parent=gene-AD12_RS07450;Dbxref=GenBank:WP_000611802.1;Name=WP_000611802.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AD12_RS07450;product=glutamate--cysteine ligase;protein_id=WP_000611802.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 37709 38137 . - . ID=gene-AD12_RS07445;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AD12_RS07445;old_locus_tag=AD12_3248 NZ_JJLK01000075.1 Protein Homology CDS 37709 38137 . - 0 ID=cds-WP_001287457.1;Parent=gene-AD12_RS07445;Dbxref=GenBank:WP_001287457.1;Name=WP_001287457.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AD12_RS07445;product=YqaA family protein;protein_id=WP_001287457.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 38134 38700 . - . ID=gene-AD12_RS07440;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AD12_RS07440;old_locus_tag=AD12_3249 NZ_JJLK01000075.1 Protein Homology CDS 38134 38700 . - 0 ID=cds-WP_000273309.1;Parent=gene-AD12_RS07440;Dbxref=GenBank:WP_000273309.1;Name=WP_000273309.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311579.1;locus_tag=AD12_RS07440;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273309.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 38981 39057 . - . ID=gene-AD12_RS07435;Name=AD12_RS07435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07435;old_locus_tag=AD12_3250 NZ_JJLK01000075.1 tRNAscan-SE tRNA 38981 39057 . - . ID=rna-AD12_RS07435;Parent=gene-AD12_RS07435;anticodon=(pos:complement(39021..39023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07435;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 38981 39057 . - . ID=exon-AD12_RS07435-1;Parent=rna-AD12_RS07435;anticodon=(pos:complement(39021..39023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07435;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 39256 39332 . - . ID=gene-AD12_RS07430;Name=AD12_RS07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07430;old_locus_tag=AD12_3251 NZ_JJLK01000075.1 tRNAscan-SE tRNA 39256 39332 . - . ID=rna-AD12_RS07430;Parent=gene-AD12_RS07430;anticodon=(pos:complement(39296..39298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07430;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 39256 39332 . - . ID=exon-AD12_RS07430-1;Parent=rna-AD12_RS07430;anticodon=(pos:complement(39296..39298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07430;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 39396 39472 . - . ID=gene-AD12_RS07425;Name=AD12_RS07425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07425;old_locus_tag=AD12_3252 NZ_JJLK01000075.1 tRNAscan-SE tRNA 39396 39472 . - . ID=rna-AD12_RS07425;Parent=gene-AD12_RS07425;anticodon=(pos:complement(39436..39438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07425;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 39396 39472 . - . ID=exon-AD12_RS07425-1;Parent=rna-AD12_RS07425;anticodon=(pos:complement(39436..39438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07425;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 39536 39612 . - . ID=gene-AD12_RS07420;Name=AD12_RS07420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07420;old_locus_tag=AD12_3253 NZ_JJLK01000075.1 tRNAscan-SE tRNA 39536 39612 . - . ID=rna-AD12_RS07420;Parent=gene-AD12_RS07420;anticodon=(pos:complement(39576..39578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07420;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 39536 39612 . - . ID=exon-AD12_RS07420-1;Parent=rna-AD12_RS07420;anticodon=(pos:complement(39576..39578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07420;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 39676 39752 . - . ID=gene-AD12_RS07415;Name=AD12_RS07415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07415;old_locus_tag=AD12_3254 NZ_JJLK01000075.1 tRNAscan-SE tRNA 39676 39752 . - . ID=rna-AD12_RS07415;Parent=gene-AD12_RS07415;anticodon=(pos:complement(39716..39718));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07415;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 39676 39752 . - . ID=exon-AD12_RS07415-1;Parent=rna-AD12_RS07415;anticodon=(pos:complement(39716..39718));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07415;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 39950 40026 . - . ID=gene-AD12_RS07410;Name=AD12_RS07410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07410;old_locus_tag=AD12_3255 NZ_JJLK01000075.1 tRNAscan-SE tRNA 39950 40026 . - . ID=rna-AD12_RS07410;Parent=gene-AD12_RS07410;anticodon=(pos:complement(39990..39992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07410;product=tRNA-Arg NZ_JJLK01000075.1 tRNAscan-SE exon 39950 40026 . - . ID=exon-AD12_RS07410-1;Parent=rna-AD12_RS07410;anticodon=(pos:complement(39990..39992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07410;product=tRNA-Arg NZ_JJLK01000075.1 RefSeq gene 40030 40122 . - . ID=gene-AD12_RS07405;Name=AD12_RS07405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS07405;old_locus_tag=AD12_3256 NZ_JJLK01000075.1 tRNAscan-SE tRNA 40030 40122 . - . ID=rna-AD12_RS07405;Parent=gene-AD12_RS07405;anticodon=(pos:complement(40086..40088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07405;product=tRNA-Ser NZ_JJLK01000075.1 tRNAscan-SE exon 40030 40122 . - . ID=exon-AD12_RS07405-1;Parent=rna-AD12_RS07405;anticodon=(pos:complement(40086..40088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS07405;product=tRNA-Ser NZ_JJLK01000075.1 RefSeq gene 40438 40623 . - . ID=gene-AD12_RS07400;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AD12_RS07400;old_locus_tag=AD12_3257 NZ_JJLK01000075.1 Protein Homology CDS 40438 40623 . - 0 ID=cds-WP_000906486.1;Parent=gene-AD12_RS07400;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AD12_RS07400;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 40858 43488 . - . ID=gene-AD12_RS07395;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AD12_RS07395;old_locus_tag=AD12_3259 NZ_JJLK01000075.1 Protein Homology CDS 40858 43488 . - 0 ID=cds-WP_000047176.1;Parent=gene-AD12_RS07395;Dbxref=GenBank:WP_000047176.1;Name=WP_000047176.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AD12_RS07395;product=alanine--tRNA ligase;protein_id=WP_000047176.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 43616 44116 . - . ID=gene-AD12_RS07385;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AD12_RS07385;old_locus_tag=AD12_3261 NZ_JJLK01000075.1 Protein Homology CDS 43616 44116 . - 0 ID=cds-WP_000140519.1;Parent=gene-AD12_RS07385;Dbxref=GenBank:WP_000140519.1;Name=WP_000140519.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311582.1;locus_tag=AD12_RS07385;product=recombination regulator RecX;protein_id=WP_000140519.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 44360 45421 . - . ID=gene-AD12_RS07380;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AD12_RS07380;old_locus_tag=AD12_3262 NZ_JJLK01000075.1 Protein Homology CDS 44360 45421 . - 0 ID=cds-WP_000963143.1;Parent=gene-AD12_RS07380;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AD12_RS07380;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 45501 45998 . - . ID=gene-AD12_RS07375;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AD12_RS07375;old_locus_tag=AD12_3263 NZ_JJLK01000075.1 Protein Homology CDS 45501 45998 . - 0 ID=cds-WP_000132231.1;Parent=gene-AD12_RS07375;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AD12_RS07375;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 46143 47228 . - . ID=gene-AD12_RS07370;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AD12_RS07370;old_locus_tag=AD12_3264 NZ_JJLK01000075.1 Protein Homology CDS 46143 47228 . - 0 ID=cds-WP_001299653.1;Parent=gene-AD12_RS07370;Dbxref=GenBank:WP_001299653.1;Name=WP_001299653.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AD12_RS07370;product=lytic murein transglycosylase B;protein_id=WP_001299653.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 47484 48047 . + . ID=gene-AD12_RS07365;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AD12_RS07365;old_locus_tag=AD12_3265 NZ_JJLK01000075.1 Protein Homology CDS 47484 48047 . + 0 ID=cds-WP_000573325.1;Parent=gene-AD12_RS07365;Dbxref=GenBank:WP_000573325.1;Name=WP_000573325.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AD12_RS07365;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573325.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 48044 49003 . + . ID=gene-AD12_RS07360;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AD12_RS07360;old_locus_tag=AD12_3266 NZ_JJLK01000075.1 Protein Homology CDS 48044 49003 . + 0 ID=cds-WP_000196934.1;Parent=gene-AD12_RS07360;Dbxref=GenBank:WP_000196934.1;Name=WP_000196934.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708510.1;locus_tag=AD12_RS07360;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000196934.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 49014 49385 . + . ID=gene-AD12_RS07355;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AD12_RS07355;old_locus_tag=AD12_3267 NZ_JJLK01000075.1 Protein Homology CDS 49014 49385 . + 0 ID=cds-WP_000216201.1;Parent=gene-AD12_RS07355;Dbxref=GenBank:WP_000216201.1;Name=WP_000216201.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708511.1;locus_tag=AD12_RS07355;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216201.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 49389 50168 . + . ID=gene-AD12_RS07350;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AD12_RS07350;old_locus_tag=AD12_3268 NZ_JJLK01000075.1 Protein Homology CDS 49389 50168 . + 0 ID=cds-WP_001077342.1;Parent=gene-AD12_RS07350;Dbxref=GenBank:WP_001077342.1;Name=WP_001077342.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AD12_RS07350;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077342.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 50273 50632 . + . ID=gene-AD12_RS07345;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AD12_RS07345;old_locus_tag=AD12_3269 NZ_JJLK01000075.1 Protein Homology CDS 50273 50632 . + 0 ID=cds-WP_032286655.1;Parent=gene-AD12_RS07345;Dbxref=GenBank:WP_032286655.1;Name=WP_032286655.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AD12_RS07345;product=transcriptional regulator GutM;protein_id=WP_032286655.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 50699 51472 . + . ID=gene-AD12_RS07340;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AD12_RS07340;old_locus_tag=AD12_3270 NZ_JJLK01000075.1 Protein Homology CDS 50699 51472 . + 0 ID=cds-WP_000804550.1;Parent=gene-AD12_RS07340;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AD12_RS07340;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 51465 52430 . + . ID=gene-AD12_RS07335;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AD12_RS07335;old_locus_tag=AD12_3271 NZ_JJLK01000075.1 Protein Homology CDS 51465 52430 . + 0 ID=cds-WP_001287415.1;Parent=gene-AD12_RS07335;Dbxref=GenBank:WP_001287415.1;Name=WP_001287415.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AD12_RS07335;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287415.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 52427 53941 . - . ID=gene-AD12_RS07330;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AD12_RS07330;old_locus_tag=AD12_3272 NZ_JJLK01000075.1 Protein Homology CDS 52427 53941 . - 0 ID=cds-WP_000010774.1;Parent=gene-AD12_RS07330;Dbxref=GenBank:WP_000010774.1;Name=WP_000010774.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311592.2;locus_tag=AD12_RS07330;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010774.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 54128 55567 . + . ID=gene-AD12_RS07325;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AD12_RS07325;old_locus_tag=AD12_3273 NZ_JJLK01000075.1 Protein Homology CDS 54128 55567 . + 0 ID=cds-WP_000029634.1;Parent=gene-AD12_RS07325;Dbxref=GenBank:WP_000029634.1;Name=WP_000029634.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417190.1;locus_tag=AD12_RS07325;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029634.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 55564 56697 . + . ID=gene-AD12_RS07320;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AD12_RS07320;old_locus_tag=AD12_3274 NZ_JJLK01000075.1 Protein Homology CDS 55564 56697 . + 0 ID=cds-WP_000064752.1;Parent=gene-AD12_RS07320;Dbxref=GenBank:WP_000064752.1;Name=WP_000064752.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AD12_RS07320;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064752.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 56825 59077 . - . ID=gene-AD12_RS07315;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AD12_RS07315;old_locus_tag=AD12_3275 NZ_JJLK01000075.1 Protein Homology CDS 56825 59077 . - 0 ID=cds-WP_001107652.1;Parent=gene-AD12_RS07315;Dbxref=GenBank:WP_001107652.1;Name=WP_001107652.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AD12_RS07315;product=carbamoyltransferase HypF;protein_id=WP_001107652.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 59230 59757 . - . ID=gene-AD12_RS07310;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AD12_RS07310;old_locus_tag=AD12_3277 NZ_JJLK01000075.1 Protein Homology CDS 59230 59757 . - 0 ID=cds-WP_001078777.1;Parent=gene-AD12_RS07310;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AD12_RS07310;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 59906 60916 . - . ID=gene-AD12_RS07305;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AD12_RS07305;old_locus_tag=AD12_3279 NZ_JJLK01000075.1 Protein Homology CDS 59906 60916 . - 0 ID=cds-WP_001392554.1;Parent=gene-AD12_RS07305;Dbxref=GenBank:WP_001392554.1;Name=WP_001392554.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AD12_RS07305;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001392554.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 61176 62633 . + . ID=gene-AD12_RS07300;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AD12_RS07300;old_locus_tag=AD12_3280 NZ_JJLK01000075.1 Protein Homology CDS 61176 62633 . + 0 ID=cds-WP_001107861.1;Parent=gene-AD12_RS07300;Dbxref=GenBank:WP_001107861.1;Name=WP_001107861.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AD12_RS07300;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_001107861.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 62642 64066 . + . ID=gene-AD12_RS07295;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AD12_RS07295;old_locus_tag=AD12_3281 NZ_JJLK01000075.1 Protein Homology CDS 62642 64066 . + 0 ID=cds-WP_000110363.1;Parent=gene-AD12_RS07295;Dbxref=GenBank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AD12_RS07295;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 64180 64599 . - . ID=gene-AD12_RS0124655;Name=AD12_RS0124655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124655;old_locus_tag=AD12_3282 NZ_JJLK01000075.1 Protein Homology CDS 64180 64599 . - 0 ID=cds-WP_000126294.1;Parent=gene-AD12_RS0124655;Dbxref=GenBank:WP_000126294.1;Name=WP_000126294.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696729.1;locus_tag=AD12_RS0124655;product=helix-turn-helix domain-containing protein;protein_id=WP_000126294.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 64596 64907 . - . ID=gene-AD12_RS07290;Name=AD12_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07290;old_locus_tag=AD12_3284 NZ_JJLK01000075.1 Protein Homology CDS 64596 64907 . - 0 ID=cds-WP_000547564.1;Parent=gene-AD12_RS07290;Dbxref=GenBank:WP_000547564.1;Name=WP_000547564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233494.1;locus_tag=AD12_RS07290;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000547564.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 65081 65842 . - . ID=gene-AD12_RS07285;Name=AD12_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07285;old_locus_tag=AD12_3285 NZ_JJLK01000075.1 Protein Homology CDS 65081 65842 . - 0 ID=cds-WP_001026446.1;Parent=gene-AD12_RS07285;Dbxref=GenBank:WP_001026446.1;Name=WP_001026446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001026455.1;locus_tag=AD12_RS07285;product=hypothetical protein;protein_id=WP_001026446.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 65867 66337 . - . ID=gene-AD12_RS07280;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AD12_RS07280;old_locus_tag=AD12_3286 NZ_JJLK01000075.1 Protein Homology CDS 65867 66337 . - 0 ID=cds-WP_000132961.1;Parent=gene-AD12_RS07280;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AD12_RS07280;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 66330 66740 . - . ID=gene-AD12_RS07275;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AD12_RS07275;old_locus_tag=AD12_3287 NZ_JJLK01000075.1 Protein Homology CDS 66330 66740 . - 0 ID=cds-WP_032286656.1;Parent=gene-AD12_RS07275;Dbxref=GenBank:WP_032286656.1;Name=WP_032286656.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AD12_RS07275;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_032286656.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 66737 67504 . - . ID=gene-AD12_RS07270;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AD12_RS07270;old_locus_tag=AD12_3288 NZ_JJLK01000075.1 Protein Homology CDS 66737 67504 . - 0 ID=cds-WP_000067399.1;Parent=gene-AD12_RS07270;Dbxref=GenBank:WP_000067399.1;Name=WP_000067399.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311602.1;locus_tag=AD12_RS07270;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067399.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 67504 68046 . - . ID=gene-AD12_RS07265;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AD12_RS07265;old_locus_tag=AD12_3289 NZ_JJLK01000075.1 Protein Homology CDS 67504 68046 . - 0 ID=cds-WP_000493792.1;Parent=gene-AD12_RS07265;Dbxref=GenBank:WP_000493792.1;Name=WP_000493792.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AD12_RS07265;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493792.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 68056 69765 . - . ID=gene-AD12_RS07260;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AD12_RS07260;old_locus_tag=AD12_3290 NZ_JJLK01000075.1 Protein Homology CDS 68056 69765 . - 0 ID=cds-WP_001288134.1;Parent=gene-AD12_RS07260;Dbxref=GenBank:WP_001288134.1;Name=WP_001288134.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AD12_RS07260;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288134.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 69783 70706 . - . ID=gene-AD12_RS07255;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AD12_RS07255;old_locus_tag=AD12_3291 NZ_JJLK01000075.1 Protein Homology CDS 69783 70706 . - 0 ID=cds-WP_000115199.1;Parent=gene-AD12_RS07255;Dbxref=GenBank:WP_000115199.1;Name=WP_000115199.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AD12_RS07255;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115199.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 70709 72535 . - . ID=gene-AD12_RS07250;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AD12_RS07250;old_locus_tag=AD12_3292 NZ_JJLK01000075.1 Protein Homology CDS 70709 72535 . - 0 ID=cds-WP_001274389.1;Parent=gene-AD12_RS07250;Dbxref=GenBank:WP_001274389.1;Name=WP_001274389.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AD12_RS07250;product=formate hydrogenlyase subunit 3;protein_id=WP_001274389.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 72532 73143 . - . ID=gene-AD12_RS07245;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AD12_RS07245;old_locus_tag=AD12_3293 NZ_JJLK01000075.1 Protein Homology CDS 72532 73143 . - 0 ID=cds-WP_001079186.1;Parent=gene-AD12_RS07245;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AD12_RS07245;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 73268 73729 . - . ID=gene-AD12_RS07240;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AD12_RS07240;old_locus_tag=AD12_3294 NZ_JJLK01000075.1 Protein Homology CDS 73268 73729 . - 0 ID=cds-WP_000158056.1;Parent=gene-AD12_RS07240;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AD12_RS07240;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 73941 74291 . + . ID=gene-AD12_RS07235;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD12_RS07235;old_locus_tag=AD12_3295 NZ_JJLK01000075.1 Protein Homology CDS 73941 74291 . + 0 ID=cds-WP_001299100.1;Parent=gene-AD12_RS07235;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AD12_RS07235;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 74295 75167 . + . ID=gene-AD12_RS07230;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AD12_RS07230;old_locus_tag=AD12_3296 NZ_JJLK01000075.1 Protein Homology CDS 74295 75167 . + 0 ID=cds-WP_000337674.1;Parent=gene-AD12_RS07230;Dbxref=GenBank:WP_000337674.1;Name=WP_000337674.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AD12_RS07230;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337674.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 75158 75430 . + . ID=gene-AD12_RS07225;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AD12_RS07225;old_locus_tag=AD12_3297 NZ_JJLK01000075.1 Protein Homology CDS 75158 75430 . + 0 ID=cds-WP_000334881.1;Parent=gene-AD12_RS07225;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AD12_RS07225;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 75430 76551 . + . ID=gene-AD12_RS07220;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AD12_RS07220;old_locus_tag=AD12_3298 NZ_JJLK01000075.1 Protein Homology CDS 75430 76551 . + 0 ID=cds-WP_001212989.1;Parent=gene-AD12_RS07220;Dbxref=GenBank:WP_001212989.1;Name=WP_001212989.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=AD12_RS07220;product=hydrogenase formation protein HypD;protein_id=WP_001212989.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 76548 77558 . + . ID=gene-AD12_RS07215;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AD12_RS07215;old_locus_tag=AD12_3299 NZ_JJLK01000075.1 Protein Homology CDS 76548 77558 . + 0 ID=cds-WP_001059939.1;Parent=gene-AD12_RS07215;Dbxref=GenBank:WP_001059939.1;Name=WP_001059939.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AD12_RS07215;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059939.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 77632 79710 . + . ID=gene-AD12_RS07210;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD12_RS07210;old_locus_tag=AD12_3300 NZ_JJLK01000075.1 Protein Homology CDS 77632 79710 . + 0 ID=cds-WP_001297144.1;Parent=gene-AD12_RS07210;Dbxref=GenBank:WP_001297144.1;Name=WP_001297144.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=AD12_RS07210;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_001297144.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 79747 80100 . - . ID=gene-AD12_RS07205;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AD12_RS07205;old_locus_tag=AD12_3301 NZ_JJLK01000075.1 Protein Homology CDS 79747 80100 . - 0 ID=cds-WP_000015499.1;Parent=gene-AD12_RS07205;Dbxref=GenBank:WP_000015499.1;Name=WP_000015499.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708533.1;locus_tag=AD12_RS07205;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015499.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 80177 80311 . - . ID=gene-AD12_RS29095;Name=AD12_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29095;old_locus_tag=AD12_3302 NZ_JJLK01000075.1 Protein Homology CDS 80177 80311 . - 0 ID=cds-WP_000611926.1;Parent=gene-AD12_RS29095;Dbxref=GenBank:WP_000611926.1;Name=WP_000611926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AD12_RS29095;product=hypothetical protein;protein_id=WP_000611926.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 80387 82948 . + . ID=gene-AD12_RS07200;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AD12_RS07200;old_locus_tag=AD12_3303 NZ_JJLK01000075.1 Protein Homology CDS 80387 82948 . + 0 ID=cds-WP_001272924.1;Parent=gene-AD12_RS07200;Dbxref=GenBank:WP_001272924.1;Name=WP_001272924.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=AD12_RS07200;product=DNA mismatch repair protein MutS;protein_id=WP_001272924.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 83054 83710 . + . ID=gene-AD12_RS07195;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AD12_RS07195;old_locus_tag=AD12_3304 NZ_JJLK01000075.1 Protein Homology CDS 83054 83710 . + 0 ID=cds-WP_001141340.1;Parent=gene-AD12_RS07195;Dbxref=GenBank:WP_001141340.1;Name=WP_001141340.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311617.1;locus_tag=AD12_RS07195;product=protein-serine/threonine phosphatase;protein_id=WP_001141340.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 83761 84528 . - . ID=gene-AD12_RS07190;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AD12_RS07190;old_locus_tag=AD12_3305 NZ_JJLK01000075.1 Protein Homology CDS 83761 84528 . - 0 ID=cds-WP_001297141.1;Parent=gene-AD12_RS07190;Dbxref=GenBank:WP_001297141.1;Name=WP_001297141.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AD12_RS07190;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001297141.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 84724 85632 . + . ID=gene-AD12_RS07185;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AD12_RS07185;old_locus_tag=AD12_3306 NZ_JJLK01000075.1 Protein Homology CDS 84724 85632 . + 0 ID=cds-WP_000847985.1;Parent=gene-AD12_RS07185;Dbxref=GenBank:WP_000847985.1;Name=WP_000847985.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AD12_RS07185;product=L-threonate dehydrogenase;protein_id=WP_000847985.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 85629 86891 . + . ID=gene-AD12_RS07180;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AD12_RS07180;old_locus_tag=AD12_3307 NZ_JJLK01000075.1 Protein Homology CDS 85629 86891 . + 0 ID=cds-WP_000590392.1;Parent=gene-AD12_RS07180;Dbxref=GenBank:WP_000590392.1;Name=WP_000590392.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AD12_RS07180;product=3-oxo-tetronate kinase;protein_id=WP_000590392.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 86888 87526 . + . ID=gene-AD12_RS07175;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AD12_RS07175;old_locus_tag=AD12_3308 NZ_JJLK01000075.1 Protein Homology CDS 86888 87526 . + 0 ID=cds-WP_001278994.1;Parent=gene-AD12_RS07175;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AD12_RS07175;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 87531 88307 . + . ID=gene-AD12_RS07170;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AD12_RS07170;old_locus_tag=AD12_3309 NZ_JJLK01000075.1 Protein Homology CDS 87531 88307 . + 0 ID=cds-WP_001497768.1;Parent=gene-AD12_RS07170;Dbxref=GenBank:WP_001497768.1;Name=WP_001497768.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AD12_RS07170;product=HPr family phosphocarrier protein;protein_id=WP_001497768.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 88396 89760 . + . ID=gene-AD12_RS07165;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AD12_RS07165;old_locus_tag=AD12_3310 NZ_JJLK01000075.1 Protein Homology CDS 88396 89760 . + 0 ID=cds-WP_000104456.1;Parent=gene-AD12_RS07165;Dbxref=GenBank:WP_000104456.1;Name=WP_000104456.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AD12_RS07165;product=GntP family transporter;protein_id=WP_000104456.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 89854 90848 . - . ID=gene-AD12_RS0124665;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=pseudogene;locus_tag=AD12_RS0124665;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 89854 90848 . - 0 ID=cds-AD12_RS0124665;Parent=gene-AD12_RS0124665;Note=frameshifted;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AD12_RS0124665;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 90911 92005 . - . ID=gene-AD12_RS07160;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AD12_RS07160;old_locus_tag=AD12_3313 NZ_JJLK01000075.1 Protein Homology CDS 90911 92005 . - 0 ID=cds-WP_306174120.1;Parent=gene-AD12_RS07160;Dbxref=GenBank:WP_306174120.1;Name=WP_306174120.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AD12_RS07160;product=murein hydrolase activator NlpD;protein_id=WP_306174120.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 92190 92816 . - . ID=gene-AD12_RS07155;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AD12_RS07155;old_locus_tag=AD12_3314 NZ_JJLK01000075.1 Protein Homology CDS 92190 92816 . - 0 ID=cds-WP_000254708.1;Parent=gene-AD12_RS07155;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AD12_RS07155;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 92810 93571 . - . ID=gene-AD12_RS07150;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AD12_RS07150;old_locus_tag=AD12_3315 NZ_JJLK01000075.1 Protein Homology CDS 92810 93571 . - 0 ID=cds-WP_001295182.1;Parent=gene-AD12_RS07150;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AD12_RS07150;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 93552 94601 . - . ID=gene-AD12_RS07145;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AD12_RS07145;old_locus_tag=AD12_3316 NZ_JJLK01000075.1 Protein Homology CDS 93552 94601 . - 0 ID=cds-WP_000568943.1;Parent=gene-AD12_RS07145;Dbxref=GenBank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AD12_RS07145;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 94598 95077 . - . ID=gene-AD12_RS07140;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AD12_RS07140;old_locus_tag=AD12_3317 NZ_JJLK01000075.1 Protein Homology CDS 94598 95077 . - 0 ID=cds-WP_001219242.1;Parent=gene-AD12_RS07140;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AD12_RS07140;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 95077 95787 . - . ID=gene-AD12_RS07135;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AD12_RS07135;old_locus_tag=AD12_3318 NZ_JJLK01000075.1 Protein Homology CDS 95077 95787 . - 0 ID=cds-WP_000246138.1;Parent=gene-AD12_RS07135;Dbxref=GenBank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AD12_RS07135;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 95806 96117 . - . ID=gene-AD12_RS07130;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AD12_RS07130;old_locus_tag=AD12_3319 NZ_JJLK01000075.1 Protein Homology CDS 95806 96117 . - 0 ID=cds-WP_000517476.1;Parent=gene-AD12_RS07130;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AD12_RS07130;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 96311 96634 . - . ID=gene-AD12_RS07125;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AD12_RS07125;old_locus_tag=AD12_3320 NZ_JJLK01000075.1 Protein Homology CDS 96311 96634 . - 0 ID=cds-WP_001246104.1;Parent=gene-AD12_RS07125;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AD12_RS07125;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 96684 97289 . - . ID=gene-AD12_RS07120;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AD12_RS07120;old_locus_tag=AD12_3321 NZ_JJLK01000075.1 Protein Homology CDS 96684 97289 . - 0 ID=cds-WP_001173673.1;Parent=gene-AD12_RS07120;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AD12_RS07120;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 97289 98716 . - . ID=gene-AD12_RS07115;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AD12_RS07115;old_locus_tag=AD12_3322 NZ_JJLK01000075.1 Protein Homology CDS 97289 98716 . - 0 ID=cds-WP_001090386.1;Parent=gene-AD12_RS07115;Dbxref=GenBank:WP_001090386.1;Name=WP_001090386.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AD12_RS07115;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090386.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 98718 99626 . - . ID=gene-AD12_RS07110;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AD12_RS07110;old_locus_tag=AD12_3323 NZ_JJLK01000075.1 Protein Homology CDS 98718 99626 . - 0 ID=cds-WP_000372108.1;Parent=gene-AD12_RS07110;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AD12_RS07110;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 99878 100915 . + . ID=gene-AD12_RS07105;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AD12_RS07105;old_locus_tag=AD12_3324 NZ_JJLK01000075.1 Protein Homology CDS 99878 100915 . + 0 ID=cds-WP_000490426.1;Parent=gene-AD12_RS07105;Dbxref=GenBank:WP_000490426.1;Name=WP_000490426.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AD12_RS07105;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490426.1;transl_table=11 NZ_JJLK01000075.1 RefSeq direct_repeat 100997 101757 . + . ID=id-NZ_JJLK01000075.1:100997..101757;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=100997..101025;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JJLK01000075.1 RefSeq gene 101854 102147 . - . ID=gene-AD12_RS07100;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AD12_RS07100;old_locus_tag=AD12_3326 NZ_JJLK01000075.1 Protein Homology CDS 101854 102147 . - 0 ID=cds-WP_000063176.1;Parent=gene-AD12_RS07100;Dbxref=GenBank:WP_000063176.1;Name=WP_000063176.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=AD12_RS07100;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_000063176.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 102144 103067 . - . ID=gene-AD12_RS07095;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=AD12_RS07095;old_locus_tag=AD12_3327 NZ_JJLK01000075.1 Protein Homology CDS 102144 103067 . - 0 ID=cds-WP_000144861.1;Parent=gene-AD12_RS07095;Dbxref=GenBank:WP_000144861.1;Name=WP_000144861.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311636.1;locus_tag=AD12_RS07095;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144861.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 103064 103714 . - . ID=gene-AD12_RS07090;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=AD12_RS07090;old_locus_tag=AD12_3328 NZ_JJLK01000075.1 Protein Homology CDS 103064 103714 . - 0 ID=cds-WP_000281446.1;Parent=gene-AD12_RS07090;Dbxref=GenBank:WP_000281446.1;Name=WP_000281446.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281458.1;locus_tag=AD12_RS07090;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281446.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 103696 104442 . - . ID=gene-AD12_RS07085;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=AD12_RS07085;old_locus_tag=AD12_3329 NZ_JJLK01000075.1 Protein Homology CDS 103696 104442 . - 0 ID=cds-WP_000085051.1;Parent=gene-AD12_RS07085;Dbxref=GenBank:WP_000085051.1;Name=WP_000085051.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311638.1;locus_tag=AD12_RS07085;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085051.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 104453 105508 . - . ID=gene-AD12_RS07080;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=AD12_RS07080;old_locus_tag=AD12_3330 NZ_JJLK01000075.1 Protein Homology CDS 104453 105508 . - 0 ID=cds-WP_000206443.1;Parent=gene-AD12_RS07080;Dbxref=GenBank:WP_000206443.1;Name=WP_000206443.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311639.1;locus_tag=AD12_RS07080;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206443.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 105520 106056 . - . ID=gene-AD12_RS07075;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=AD12_RS07075;old_locus_tag=AD12_3331 NZ_JJLK01000075.1 Protein Homology CDS 105520 106056 . - 0 ID=cds-WP_000029329.1;Parent=gene-AD12_RS07075;Dbxref=GenBank:WP_000029329.1;Name=WP_000029329.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311640.1;locus_tag=AD12_RS07075;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000029329.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 106053 107615 . - . ID=gene-AD12_RS07070;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=AD12_RS07070;old_locus_tag=AD12_3332 NZ_JJLK01000075.1 Protein Homology CDS 106053 107615 . - 0 ID=cds-WP_001084084.1;Parent=gene-AD12_RS07070;Dbxref=GenBank:WP_001084084.1;Name=WP_001084084.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311641.1;locus_tag=AD12_RS07070;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_001084084.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 107713 110412 . - . ID=gene-AD12_RS07065;Name=AD12_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07065;old_locus_tag=AD12_3333 NZ_JJLK01000075.1 Protein Homology CDS 107713 110412 . - 0 ID=cds-WP_001233970.1;Parent=gene-AD12_RS07065;Dbxref=GenBank:WP_001233970.1;Name=WP_001233970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233973.1;locus_tag=AD12_RS07065;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_001233970.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 110606 110758 . - . ID=gene-AD12_RS07060;Name=AD12_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS07060;old_locus_tag=AD12_3334 NZ_JJLK01000075.1 Protein Homology CDS 110606 110758 . - 0 ID=cds-WP_000956458.1;Parent=gene-AD12_RS07060;Dbxref=GenBank:WP_000956458.1;Name=WP_000956458.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AD12_RS07060;product=Hok/Gef family protein;protein_id=WP_000956458.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 111023 111757 . - . ID=gene-AD12_RS07055;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AD12_RS07055;old_locus_tag=AD12_3335 NZ_JJLK01000075.1 Protein Homology CDS 111023 111757 . - 0 ID=cds-WP_000039842.1;Parent=gene-AD12_RS07055;Dbxref=GenBank:WP_000039842.1;Name=WP_000039842.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708560.2;locus_tag=AD12_RS07055;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039842.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 111831 113543 . - . ID=gene-AD12_RS07050;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AD12_RS07050;old_locus_tag=AD12_3336 NZ_JJLK01000075.1 Protein Homology CDS 111831 113543 . - 0 ID=cds-WP_001290706.1;Parent=gene-AD12_RS07050;Dbxref=GenBank:WP_001290706.1;Name=WP_001290706.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AD12_RS07050;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290706.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 113543 115342 . - . ID=gene-AD12_RS07045;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AD12_RS07045;old_locus_tag=AD12_3337 NZ_JJLK01000075.1 Protein Homology CDS 113543 115342 . - 0 ID=cds-WP_000211954.1;Parent=gene-AD12_RS07045;Dbxref=GenBank:WP_000211954.1;Name=WP_000211954.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AD12_RS07045;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211954.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 115661 116023 . + . ID=gene-AD12_RS07040;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AD12_RS07040;old_locus_tag=AD12_3339 NZ_JJLK01000075.1 Protein Homology CDS 115661 116023 . + 0 ID=cds-WP_000108294.1;Parent=gene-AD12_RS07040;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AD12_RS07040;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 116101 117372 . + . ID=gene-AD12_RS07035;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AD12_RS07035;old_locus_tag=AD12_3340 NZ_JJLK01000075.1 Protein Homology CDS 116101 117372 . + 0 ID=cds-WP_001295150.1;Parent=gene-AD12_RS07035;Dbxref=GenBank:WP_001295150.1;Name=WP_001295150.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AD12_RS07035;product=FAD-dependent oxidoreductase;protein_id=WP_001295150.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 117363 117623 . + . ID=gene-AD12_RS07030;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AD12_RS07030;old_locus_tag=AD12_3341 NZ_JJLK01000075.1 Protein Homology CDS 117363 117623 . + 0 ID=cds-WP_000109532.1;Parent=gene-AD12_RS07030;Dbxref=GenBank:WP_000109532.1;Name=WP_000109532.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AD12_RS07030;product=ferredoxin family protein;protein_id=WP_000109532.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 117640 118215 . + . ID=gene-AD12_RS07025;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AD12_RS07025;old_locus_tag=AD12_3342 NZ_JJLK01000075.1 Protein Homology CDS 117640 118215 . + 0 ID=cds-WP_001130266.1;Parent=gene-AD12_RS07025;Dbxref=GenBank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AD12_RS07025;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 118363 119223 . - . ID=gene-AD12_RS07020;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AD12_RS07020;old_locus_tag=AD12_3343 NZ_JJLK01000075.1 Protein Homology CDS 118363 119223 . - 0 ID=cds-WP_001324446.1;Parent=gene-AD12_RS07020;Dbxref=GenBank:WP_001324446.1;Name=WP_001324446.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AD12_RS07020;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001324446.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 119220 119999 . - . ID=gene-AD12_RS07015;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AD12_RS07015;old_locus_tag=AD12_3344 NZ_JJLK01000075.1 Protein Homology CDS 119220 119999 . - 0 ID=cds-WP_010791587.1;Parent=gene-AD12_RS07015;Dbxref=GenBank:WP_010791587.1;Name=WP_010791587.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AD12_RS07015;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_010791587.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 119977 121386 . - . ID=gene-AD12_RS07010;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AD12_RS07010;old_locus_tag=AD12_3345 NZ_JJLK01000075.1 Protein Homology CDS 119977 121386 . - 0 ID=cds-WP_000147666.1;Parent=gene-AD12_RS07010;Dbxref=GenBank:WP_000147666.1;Name=WP_000147666.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AD12_RS07010;product=MFS transporter;protein_id=WP_000147666.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 121408 122862 . - . ID=gene-AD12_RS07005;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AD12_RS07005;old_locus_tag=AD12_3346 NZ_JJLK01000075.1 Protein Homology CDS 121408 122862 . - 0 ID=cds-WP_000059312.1;Parent=gene-AD12_RS07005;Dbxref=GenBank:WP_000059312.1;Name=WP_000059312.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=AD12_RS07005;product=FAD-binding oxidoreductase;protein_id=WP_000059312.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 122932 123717 . - . ID=gene-AD12_RS07000;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AD12_RS07000;old_locus_tag=AD12_3347 NZ_JJLK01000075.1 Protein Homology CDS 122932 123717 . - 0 ID=cds-WP_000021330.1;Parent=gene-AD12_RS07000;Dbxref=GenBank:WP_000021330.1;Name=WP_000021330.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AD12_RS07000;product=SDR family oxidoreductase;protein_id=WP_000021330.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 124036 125313 . + . ID=gene-AD12_RS06995;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AD12_RS06995;old_locus_tag=AD12_3348 NZ_JJLK01000075.1 Protein Homology CDS 124036 125313 . + 0 ID=cds-WP_032286659.1;Parent=gene-AD12_RS06995;Dbxref=GenBank:WP_032286659.1;Name=WP_032286659.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311658.1;locus_tag=AD12_RS06995;product=MFS transporter;protein_id=WP_032286659.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 125340 126818 . + . ID=gene-AD12_RS06990;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AD12_RS06990;old_locus_tag=AD12_3349 NZ_JJLK01000075.1 Protein Homology CDS 125340 126818 . + 0 ID=cds-WP_000039683.1;Parent=gene-AD12_RS06990;Dbxref=GenBank:WP_000039683.1;Name=WP_000039683.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AD12_RS06990;product=FGGY-family carbohydrate kinase;protein_id=WP_000039683.1;transl_table=11 NZ_JJLK01000075.1 RefSeq direct_repeat 127456 127972 . + . ID=id-NZ_JJLK01000075.1:127456..127972;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=127456..127484;rpt_unit_seq=cggtttatccccgctggcgcggggaactc NZ_JJLK01000075.1 RefSeq gene 128312 128983 . - . ID=gene-AD12_RS06985;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AD12_RS06985;old_locus_tag=AD12_3351 NZ_JJLK01000075.1 Protein Homology CDS 128312 128983 . - 0 ID=cds-WP_001199979.1;Parent=gene-AD12_RS06985;Dbxref=GenBank:WP_001199979.1;Name=WP_001199979.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AD12_RS06985;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199979.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 129122 129262 . + . ID=gene-AD12_RS06980;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AD12_RS06980;old_locus_tag=AD12_3352 NZ_JJLK01000075.1 Protein Homology CDS 129122 129262 . + 0 ID=cds-WP_001288227.1;Parent=gene-AD12_RS06980;Dbxref=GenBank:WP_001288227.1;Name=WP_001288227.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AD12_RS06980;product=cell envelope stress response protein YqcG;protein_id=WP_001288227.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 129276 130148 . + . ID=gene-AD12_RS06975;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AD12_RS06975;old_locus_tag=AD12_3353 NZ_JJLK01000075.1 Protein Homology CDS 129276 130148 . + 0 ID=cds-WP_001268446.1;Parent=gene-AD12_RS06975;Dbxref=GenBank:WP_001268446.1;Name=WP_001268446.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AD12_RS06975;product=TPM domain-containing protein;protein_id=WP_001268446.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 130208 131506 . - . ID=gene-AD12_RS06970;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AD12_RS06970;old_locus_tag=AD12_3354 NZ_JJLK01000075.1 Protein Homology CDS 130208 131506 . - 0 ID=cds-WP_000036723.1;Parent=gene-AD12_RS06970;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AD12_RS06970;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 131594 133231 . - . ID=gene-AD12_RS06965;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AD12_RS06965;old_locus_tag=AD12_3355 NZ_JJLK01000075.1 Protein Homology CDS 131594 133231 . - 0 ID=cds-WP_000210845.1;Parent=gene-AD12_RS06965;Dbxref=GenBank:WP_000210845.1;Name=WP_000210845.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AD12_RS06965;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210845.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 133459 134250 . - . ID=gene-AD12_RS06960;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AD12_RS06960;old_locus_tag=AD12_3356 NZ_JJLK01000075.1 Protein Homology CDS 133459 134250 . - 0 ID=cds-WP_001071648.1;Parent=gene-AD12_RS06960;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AD12_RS06960;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 134321 134656 . - . ID=gene-AD12_RS06955;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AD12_RS06955;old_locus_tag=AD12_3357 NZ_JJLK01000075.1 Protein Homology CDS 134321 134656 . - 0 ID=cds-WP_000254738.1;Parent=gene-AD12_RS06955;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AD12_RS06955;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 134656 134904 . - . ID=gene-AD12_RS06950;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AD12_RS06950;old_locus_tag=AD12_3358 NZ_JJLK01000075.1 Protein Homology CDS 134656 134904 . - 0 ID=cds-WP_000581937.1;Parent=gene-AD12_RS06950;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AD12_RS06950;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 134982 137216 . - . ID=gene-AD12_RS06945;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AD12_RS06945;old_locus_tag=AD12_3359 NZ_JJLK01000075.1 Protein Homology CDS 134982 137216 . - 0 ID=cds-WP_000226815.1;Parent=gene-AD12_RS06945;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AD12_RS06945;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 137264 138565 . - . ID=gene-AD12_RS06940;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AD12_RS06940;old_locus_tag=AD12_3360 NZ_JJLK01000075.1 Protein Homology CDS 137264 138565 . - 0 ID=cds-WP_000046812.1;Parent=gene-AD12_RS06940;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AD12_RS06940;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 138622 141378 . + . ID=gene-AD12_RS06935;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AD12_RS06935;old_locus_tag=AD12_3361 NZ_JJLK01000075.1 Protein Homology CDS 138622 141378 . + 0 ID=cds-WP_001472119.1;Parent=gene-AD12_RS06935;Dbxref=GenBank:WP_001472119.1;Name=WP_001472119.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AD12_RS06935;product=two-component sensor histidine kinase BarA;protein_id=WP_001472119.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 141610 142950 . - . ID=gene-AD12_RS06930;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AD12_RS06930;old_locus_tag=AD12_3363 NZ_JJLK01000075.1 Protein Homology CDS 141610 142950 . - 0 ID=cds-WP_000098234.1;Parent=gene-AD12_RS06930;Dbxref=GenBank:WP_000098234.1;Name=WP_000098234.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AD12_RS06930;product=glucarate dehydratase;protein_id=WP_000098234.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 142971 144311 . - . ID=gene-AD12_RS06925;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AD12_RS06925;old_locus_tag=AD12_3364 NZ_JJLK01000075.1 Protein Homology CDS 142971 144311 . - 0 ID=cds-WP_032286661.1;Parent=gene-AD12_RS06925;Dbxref=GenBank:WP_032286661.1;Name=WP_032286661.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708582.2;locus_tag=AD12_RS06925;product=enolase C-terminal domain-like protein;protein_id=WP_032286661.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 144313 145665 . - . ID=gene-AD12_RS06920;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AD12_RS06920;old_locus_tag=AD12_3365 NZ_JJLK01000075.1 Protein Homology CDS 144313 145665 . - 0 ID=cds-WP_000097082.1;Parent=gene-AD12_RS06920;Dbxref=GenBank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AD12_RS06920;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 146100 146549 . - . ID=gene-AD12_RS06915;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AD12_RS06915;old_locus_tag=AD12_3367 NZ_JJLK01000075.1 Protein Homology CDS 146100 146549 . - 0 ID=cds-WP_000807750.1;Parent=gene-AD12_RS06915;Dbxref=GenBank:WP_000807750.1;Name=WP_000807750.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AD12_RS06915;product=flavodoxin;protein_id=WP_000807750.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 146567 147349 . - . ID=gene-AD12_RS06910;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AD12_RS06910;old_locus_tag=AD12_3368 NZ_JJLK01000075.1 Protein Homology CDS 146567 147349 . - 0 ID=cds-WP_000890008.1;Parent=gene-AD12_RS06910;Dbxref=GenBank:WP_000890008.1;Name=WP_000890008.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AD12_RS06910;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890008.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 147349 147678 . - . ID=gene-AD12_RS06905;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AD12_RS06905;old_locus_tag=AD12_3369 NZ_JJLK01000075.1 Protein Homology CDS 147349 147678 . - 0 ID=cds-WP_000206990.1;Parent=gene-AD12_RS06905;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AD12_RS06905;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 148300 148845 . - . ID=gene-AD12_RS06900;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AD12_RS06900;old_locus_tag=AD12_3370 NZ_JJLK01000075.1 Protein Homology CDS 148300 148845 . - 0 ID=cds-WP_000342438.1;Parent=gene-AD12_RS06900;Dbxref=GenBank:WP_000342438.1;Name=WP_000342438.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AD12_RS06900;product=SecY-interacting protein;protein_id=WP_000342438.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 148913 149761 . + . ID=gene-AD12_RS06895;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AD12_RS06895;old_locus_tag=AD12_3371 NZ_JJLK01000075.1 Protein Homology CDS 148913 149761 . + 0 ID=cds-WP_000100430.1;Parent=gene-AD12_RS06895;Dbxref=GenBank:WP_000100430.1;Name=WP_000100430.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708588.1;locus_tag=AD12_RS06895;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100430.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 149873 151237 . + . ID=gene-AD12_RS06890;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AD12_RS06890;old_locus_tag=AD12_3372 NZ_JJLK01000075.1 Protein Homology CDS 149873 151237 . + 0 ID=cds-WP_024202420.1;Parent=gene-AD12_RS06890;Dbxref=GenBank:WP_024202420.1;Name=WP_024202420.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AD12_RS06890;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_024202420.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 151794 153083 . + . ID=gene-AD12_RS06885;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AD12_RS06885;old_locus_tag=AD12_3374 NZ_JJLK01000075.1 Protein Homology CDS 151794 153083 . + 0 ID=cds-WP_000450476.1;Parent=gene-AD12_RS06885;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AD12_RS06885;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 153141 154508 . + . ID=gene-AD12_RS06880;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AD12_RS06880;old_locus_tag=AD12_3375 NZ_JJLK01000075.1 Protein Homology CDS 153141 154508 . + 0 ID=cds-WP_000626396.1;Parent=gene-AD12_RS06880;Dbxref=GenBank:WP_000626396.1;Name=WP_000626396.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AD12_RS06880;product=L-serine ammonia-lyase II;protein_id=WP_000626396.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 154620 155375 . + . ID=gene-AD12_RS06875;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AD12_RS06875;old_locus_tag=AD12_3376 NZ_JJLK01000075.1 Protein Homology CDS 154620 155375 . + 0 ID=cds-WP_000268232.1;Parent=gene-AD12_RS06875;Dbxref=GenBank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AD12_RS06875;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 155430 156578 . - . ID=gene-AD12_RS06870;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AD12_RS06870;old_locus_tag=AD12_3377 NZ_JJLK01000075.1 Protein Homology CDS 155430 156578 . - 0 ID=cds-WP_000013588.1;Parent=gene-AD12_RS06870;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AD12_RS06870;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 156606 157253 . - . ID=gene-AD12_RS06865;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AD12_RS06865;old_locus_tag=AD12_3378 NZ_JJLK01000075.1 Protein Homology CDS 156606 157253 . - 0 ID=cds-WP_000440775.1;Parent=gene-AD12_RS06865;Dbxref=GenBank:WP_000440775.1;Name=WP_000440775.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311687.1;locus_tag=AD12_RS06865;product=L-fuculose-phosphate aldolase;protein_id=WP_000440775.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 157800 159116 . + . ID=gene-AD12_RS06860;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AD12_RS06860;old_locus_tag=AD12_3379 NZ_JJLK01000075.1 Protein Homology CDS 157800 159116 . + 0 ID=cds-WP_000528603.1;Parent=gene-AD12_RS06860;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AD12_RS06860;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 159149 160924 . + . ID=gene-AD12_RS06855;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AD12_RS06855;old_locus_tag=AD12_3380 NZ_JJLK01000075.1 Protein Homology CDS 159149 160924 . + 0 ID=cds-WP_000724150.1;Parent=gene-AD12_RS06855;Dbxref=GenBank:WP_000724150.1;Name=WP_000724150.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AD12_RS06855;product=L-fucose isomerase;protein_id=WP_000724150.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 161033 162451 . + . ID=gene-AD12_RS06850;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AD12_RS06850;old_locus_tag=AD12_3381 NZ_JJLK01000075.1 Protein Homology CDS 161033 162451 . + 0 ID=cds-WP_000808373.1;Parent=gene-AD12_RS06850;Dbxref=GenBank:WP_000808373.1;Name=WP_000808373.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AD12_RS06850;product=L-fuculokinase;protein_id=WP_000808373.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 162453 162875 . + . ID=gene-AD12_RS06845;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AD12_RS06845;old_locus_tag=AD12_3382 NZ_JJLK01000075.1 Protein Homology CDS 162453 162875 . + 0 ID=cds-WP_000920840.1;Parent=gene-AD12_RS06845;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AD12_RS06845;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 162933 163664 . + . ID=gene-AD12_RS06840;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AD12_RS06840;old_locus_tag=AD12_3383 NZ_JJLK01000075.1 Protein Homology CDS 162933 163664 . + 0 ID=cds-WP_000642344.1;Parent=gene-AD12_RS06840;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AD12_RS06840;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 163708 164808 . - . ID=gene-AD12_RS06835;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AD12_RS06835;old_locus_tag=AD12_3384 NZ_JJLK01000075.1 Protein Homology CDS 163708 164808 . - 0 ID=cds-WP_001045520.1;Parent=gene-AD12_RS06835;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AD12_RS06835;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 164801 165196 . - . ID=gene-AD12_RS06830;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AD12_RS06830;old_locus_tag=AD12_3385 NZ_JJLK01000075.1 Protein Homology CDS 164801 165196 . - 0 ID=cds-WP_000203905.1;Parent=gene-AD12_RS06830;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AD12_RS06830;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 165215 166132 . - . ID=gene-AD12_RS06825;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AD12_RS06825;old_locus_tag=AD12_3386 NZ_JJLK01000075.1 Protein Homology CDS 165215 166132 . - 0 ID=cds-WP_000044401.1;Parent=gene-AD12_RS06825;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AD12_RS06825;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 166483 166710 . - . ID=gene-AD12_RS06820;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AD12_RS06820;old_locus_tag=AD12_3387 NZ_JJLK01000075.1 Protein Homology CDS 166483 166710 . - 0 ID=cds-WP_000750398.1;Parent=gene-AD12_RS06820;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AD12_RS06820;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 166902 168107 . + . ID=gene-AD12_RS06815;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AD12_RS06815;old_locus_tag=AD12_3388 NZ_JJLK01000075.1 Protein Homology CDS 166902 168107 . + 0 ID=cds-WP_001356254.1;Parent=gene-AD12_RS06815;Dbxref=GenBank:WP_001356254.1;Name=WP_001356254.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AD12_RS06815;product=cysteine desulfurase CsdA;protein_id=WP_001356254.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 168107 168550 . + . ID=gene-AD12_RS06810;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AD12_RS06810;old_locus_tag=AD12_3389 NZ_JJLK01000075.1 Protein Homology CDS 168107 168550 . + 0 ID=cds-WP_000184249.1;Parent=gene-AD12_RS06810;Dbxref=GenBank:WP_000184249.1;Name=WP_000184249.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AD12_RS06810;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184249.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 168601 169407 . - . ID=gene-AD12_RS06805;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AD12_RS06805;old_locus_tag=AD12_3390 NZ_JJLK01000075.1 Protein Homology CDS 168601 169407 . - 0 ID=cds-WP_000117734.1;Parent=gene-AD12_RS06805;Dbxref=GenBank:WP_000117734.1;Name=WP_000117734.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708606.1;locus_tag=AD12_RS06805;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117734.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 169646 170743 . - . ID=gene-AD12_RS06800;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AD12_RS06800;old_locus_tag=AD12_3391 NZ_JJLK01000075.1 Protein Homology CDS 169646 170743 . - 0 ID=cds-WP_000678646.1;Parent=gene-AD12_RS06800;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AD12_RS06800;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 170952 171028 . + . ID=gene-AD12_RS06795;Name=AD12_RS06795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS06795;old_locus_tag=AD12_3392 NZ_JJLK01000075.1 tRNAscan-SE tRNA 170952 171028 . + . ID=rna-AD12_RS06795;Parent=gene-AD12_RS06795;anticodon=(pos:170986..170988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06795;product=tRNA-Met NZ_JJLK01000075.1 tRNAscan-SE exon 170952 171028 . + . ID=exon-AD12_RS06795-1;Parent=rna-AD12_RS06795;anticodon=(pos:170986..170988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06795;product=tRNA-Met NZ_JJLK01000075.1 RefSeq gene 171062 171138 . + . ID=gene-AD12_RS06790;Name=AD12_RS06790;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS06790;old_locus_tag=AD12_3393 NZ_JJLK01000075.1 tRNAscan-SE tRNA 171062 171138 . + . ID=rna-AD12_RS06790;Parent=gene-AD12_RS06790;anticodon=(pos:171096..171098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06790;product=tRNA-Met NZ_JJLK01000075.1 tRNAscan-SE exon 171062 171138 . + . ID=exon-AD12_RS06790-1;Parent=rna-AD12_RS06790;anticodon=(pos:171096..171098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06790;product=tRNA-Met NZ_JJLK01000075.1 RefSeq gene 171172 171248 . + . ID=gene-AD12_RS06785;Name=AD12_RS06785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS06785;old_locus_tag=AD12_3394 NZ_JJLK01000075.1 tRNAscan-SE tRNA 171172 171248 . + . ID=rna-AD12_RS06785;Parent=gene-AD12_RS06785;anticodon=(pos:171206..171208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06785;product=tRNA-Met NZ_JJLK01000075.1 tRNAscan-SE exon 171172 171248 . + . ID=exon-AD12_RS06785-1;Parent=rna-AD12_RS06785;anticodon=(pos:171206..171208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06785;product=tRNA-Met NZ_JJLK01000075.1 RefSeq gene 171323 172576 . - . ID=gene-AD12_RS06780;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AD12_RS06780;old_locus_tag=AD12_3395 NZ_JJLK01000075.1 Protein Homology CDS 171323 172576 . - 0 ID=cds-WP_000016907.1;Parent=gene-AD12_RS06780;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AD12_RS06780;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 172808 174139 . + . ID=gene-AD12_RS06775;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AD12_RS06775;old_locus_tag=AD12_3396 NZ_JJLK01000075.1 Protein Homology CDS 172808 174139 . + 0 ID=cds-WP_000237948.1;Parent=gene-AD12_RS06775;Dbxref=GenBank:WP_000237948.1;Name=WP_000237948.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AD12_RS06775;product=amino-acid N-acetyltransferase;protein_id=WP_000237948.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 174201 176027 . - . ID=gene-AD12_RS06770;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AD12_RS06770;old_locus_tag=AD12_3397 NZ_JJLK01000075.1 Protein Homology CDS 174201 176027 . - 0 ID=cds-WP_000775946.1;Parent=gene-AD12_RS06770;Dbxref=GenBank:WP_000775946.1;Name=WP_000775946.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AD12_RS06770;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775946.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 176027 179569 . - . ID=gene-AD12_RS06765;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AD12_RS06765;old_locus_tag=AD12_3398 NZ_JJLK01000075.1 Protein Homology CDS 176027 179569 . - 0 ID=cds-WP_001285985.1;Parent=gene-AD12_RS06765;Dbxref=GenBank:WP_001285985.1;Name=WP_001285985.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708611.2;locus_tag=AD12_RS06765;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001285985.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 179562 182450 . - . ID=gene-AD12_RS06760;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AD12_RS06760;old_locus_tag=AD12_3399 NZ_JJLK01000075.1 Protein Homology CDS 179562 182450 . - 0 ID=cds-WP_001138163.1;Parent=gene-AD12_RS06760;Dbxref=GenBank:WP_001138163.1;Name=WP_001138163.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311705.1;locus_tag=AD12_RS06760;product=pitrilysin;protein_id=WP_001138163.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 182626 185994 . - . ID=gene-AD12_RS06755;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AD12_RS06755;old_locus_tag=AD12_3400 NZ_JJLK01000075.1 Protein Homology CDS 182626 185994 . - 0 ID=cds-WP_000946943.1;Parent=gene-AD12_RS06755;Dbxref=GenBank:WP_000946943.1;Name=WP_000946943.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AD12_RS06755;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946943.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 186007 186330 . - . ID=gene-AD12_RS06750;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AD12_RS06750;old_locus_tag=AD12_3401 NZ_JJLK01000075.1 Protein Homology CDS 186007 186330 . - 0 ID=cds-WP_001276478.1;Parent=gene-AD12_RS06750;Dbxref=GenBank:WP_001276478.1;Name=WP_001276478.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AD12_RS06750;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276478.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 186315 186722 . - . ID=gene-AD12_RS06745;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AD12_RS06745;old_locus_tag=AD12_3402 NZ_JJLK01000075.1 Protein Homology CDS 186315 186722 . - 0 ID=cds-WP_001078388.1;Parent=gene-AD12_RS06745;Dbxref=GenBank:WP_001078388.1;Name=WP_001078388.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AD12_RS06745;product=DUF2509 family protein;protein_id=WP_001078388.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 186719 187282 . - . ID=gene-AD12_RS06740;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AD12_RS06740;old_locus_tag=AD12_3403 NZ_JJLK01000075.1 Protein Homology CDS 186719 187282 . - 0 ID=cds-WP_001144322.1;Parent=gene-AD12_RS06740;Dbxref=GenBank:WP_001144322.1;Name=WP_001144322.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=AD12_RS06740;product=prepilin peptidase-dependent protein;protein_id=WP_001144322.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 187273 187743 . - . ID=gene-AD12_RS06735;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AD12_RS06735;old_locus_tag=AD12_3404 NZ_JJLK01000075.1 Protein Homology CDS 187273 187743 . - 0 ID=cds-WP_000857051.1;Parent=gene-AD12_RS06735;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AD12_RS06735;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 187928 188722 . - . ID=gene-AD12_RS06730;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AD12_RS06730;old_locus_tag=AD12_3405 NZ_JJLK01000075.1 Protein Homology CDS 187928 188722 . - 0 ID=cds-WP_000816232.1;Parent=gene-AD12_RS06730;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AD12_RS06730;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 188729 189604 . - . ID=gene-AD12_RS06725;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AD12_RS06725;old_locus_tag=AD12_3406 NZ_JJLK01000075.1 Protein Homology CDS 188729 189604 . - 0 ID=cds-WP_000204658.1;Parent=gene-AD12_RS06725;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AD12_RS06725;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 189755 192001 . - . ID=gene-AD12_RS06720;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD12_RS06720;old_locus_tag=AD12_3407 NZ_JJLK01000075.1 Protein Homology CDS 189755 192001 . - 0 ID=cds-WP_000957912.1;Parent=gene-AD12_RS06720;Dbxref=GenBank:WP_000957912.1;Name=WP_000957912.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=AD12_RS06720;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957912.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 192014 192544 . - . ID=gene-AD12_RS06715;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AD12_RS06715;old_locus_tag=AD12_3408 NZ_JJLK01000075.1 Protein Homology CDS 192014 192544 . - 0 ID=cds-WP_000564489.1;Parent=gene-AD12_RS06715;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AD12_RS06715;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 192897 193043 . - . ID=gene-AD12_RS29710;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AD12_RS29710 NZ_JJLK01000075.1 Protein Homology CDS 192897 193043 . - 0 ID=cds-WP_000953278.1;Parent=gene-AD12_RS29710;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AD12_RS29710;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 193229 193918 . + . ID=gene-AD12_RS06705;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AD12_RS06705;old_locus_tag=AD12_3410 NZ_JJLK01000075.1 Protein Homology CDS 193229 193918 . + 0 ID=cds-WP_000082188.1;Parent=gene-AD12_RS06705;Dbxref=GenBank:WP_000082188.1;Name=WP_000082188.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311715.1;locus_tag=AD12_RS06705;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082188.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 193987 194700 . + . ID=gene-AD12_RS06700;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AD12_RS06700;old_locus_tag=AD12_3411 NZ_JJLK01000075.1 Protein Homology CDS 193987 194700 . + 0 ID=cds-WP_000895624.1;Parent=gene-AD12_RS06700;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AD12_RS06700;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 194838 195056 . + . ID=gene-AD12_RS06695;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AD12_RS06695;old_locus_tag=AD12_3412 NZ_JJLK01000075.1 Protein Homology CDS 194838 195056 . + 0 ID=cds-WP_000758655.1;Parent=gene-AD12_RS06695;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AD12_RS06695;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 195164 196204 . + . ID=gene-AD12_RS06690;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AD12_RS06690;old_locus_tag=AD12_3413 NZ_JJLK01000075.1 Protein Homology CDS 195164 196204 . + 0 ID=cds-WP_001199295.1;Parent=gene-AD12_RS06690;Dbxref=GenBank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AD12_RS06690;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 196236 197429 . - . ID=gene-AD12_RS06685;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AD12_RS06685;old_locus_tag=AD12_3414 NZ_JJLK01000075.1 Protein Homology CDS 196236 197429 . - 0 ID=cds-WP_000004616.1;Parent=gene-AD12_RS06685;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AD12_RS06685;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 197422 199581 . - . ID=gene-AD12_RS06680;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AD12_RS06680;old_locus_tag=AD12_3415 NZ_JJLK01000075.1 Protein Homology CDS 197422 199581 . - 0 ID=cds-WP_000899054.1;Parent=gene-AD12_RS06680;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AD12_RS06680;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 200167 201198 . + . ID=gene-AD12_RS06675;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AD12_RS06675;old_locus_tag=AD12_3416 NZ_JJLK01000075.1 Protein Homology CDS 200167 201198 . + 0 ID=cds-WP_000201048.1;Parent=gene-AD12_RS06675;Dbxref=GenBank:WP_000201048.1;Name=WP_000201048.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AD12_RS06675;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201048.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 201205 202467 . - . ID=gene-AD12_RS06670;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AD12_RS06670;old_locus_tag=AD12_3417 NZ_JJLK01000075.1 Protein Homology CDS 201205 202467 . - 0 ID=cds-WP_001120707.1;Parent=gene-AD12_RS06670;Dbxref=GenBank:WP_001120707.1;Name=WP_001120707.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AD12_RS06670;product=diaminopimelate decarboxylase;protein_id=WP_001120707.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 202589 203524 . + . ID=gene-AD12_RS06665;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AD12_RS06665;old_locus_tag=AD12_3418 NZ_JJLK01000075.1 Protein Homology CDS 202589 203524 . + 0 ID=cds-WP_000741827.1;Parent=gene-AD12_RS06665;Dbxref=GenBank:WP_000741827.1;Name=WP_000741827.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311723.1;locus_tag=AD12_RS06665;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741827.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 203511 204203 . - . ID=gene-AD12_RS06660;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AD12_RS06660;old_locus_tag=AD12_3419 NZ_JJLK01000075.1 Protein Homology CDS 203511 204203 . - 0 ID=cds-WP_000848664.1;Parent=gene-AD12_RS06660;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AD12_RS06660;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 204332 205750 . - . ID=gene-AD12_RS06655;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AD12_RS06655;old_locus_tag=AD12_3420 NZ_JJLK01000075.1 Protein Homology CDS 204332 205750 . - 0 ID=cds-WP_000256438.1;Parent=gene-AD12_RS06655;Dbxref=GenBank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AD12_RS06655;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 206065 206826 . - . ID=gene-AD12_RS06650;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AD12_RS06650;old_locus_tag=AD12_3421 NZ_JJLK01000075.1 Protein Homology CDS 206065 206826 . - 0 ID=cds-WP_000603518.1;Parent=gene-AD12_RS06650;Dbxref=GenBank:WP_000603518.1;Name=WP_000603518.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311726.1;locus_tag=AD12_RS06650;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603518.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 206856 207692 . - . ID=gene-AD12_RS06645;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AD12_RS06645;old_locus_tag=AD12_3422 NZ_JJLK01000075.1 Protein Homology CDS 206856 207692 . - 0 ID=cds-WP_000383224.1;Parent=gene-AD12_RS06645;Dbxref=GenBank:WP_000383224.1;Name=WP_000383224.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AD12_RS06645;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383224.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 207979 209160 . - . ID=gene-AD12_RS06640;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AD12_RS06640;old_locus_tag=AD12_3423 NZ_JJLK01000075.1 Protein Homology CDS 207979 209160 . - 0 ID=cds-WP_001390591.1;Parent=gene-AD12_RS06640;Dbxref=GenBank:WP_001390591.1;Name=WP_001390591.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AD12_RS06640;product=acetyl-CoA C-acetyltransferase;protein_id=WP_001390591.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 209415 210644 . + . ID=gene-AD12_RS06635;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AD12_RS06635;old_locus_tag=AD12_3424 NZ_JJLK01000075.1 Protein Homology CDS 209415 210644 . + 0 ID=cds-WP_000065950.1;Parent=gene-AD12_RS06635;Dbxref=GenBank:WP_000065950.1;Name=WP_000065950.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AD12_RS06635;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 211104 211736 . + . ID=gene-AD12_RS06630;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AD12_RS06630;old_locus_tag=AD12_3425 NZ_JJLK01000075.1 Protein Homology CDS 211104 211736 . + 0 ID=cds-WP_001387025.1;Parent=gene-AD12_RS06630;Dbxref=GenBank:WP_001387025.1;Name=WP_001387025.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AD12_RS06630;product=helix-turn-helix transcriptional regulator;protein_id=WP_001387025.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 212070 212879 . + . ID=gene-AD12_RS06625;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AD12_RS06625;old_locus_tag=AD12_3427 NZ_JJLK01000075.1 Protein Homology CDS 212070 212879 . + 0 ID=cds-WP_001345937.1;Parent=gene-AD12_RS06625;Dbxref=GenBank:WP_001345937.1;Name=WP_001345937.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AD12_RS06625;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001345937.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 212872 213354 . + . ID=gene-AD12_RS06620;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=AD12_RS06620;old_locus_tag=AD12_3428 NZ_JJLK01000075.1 Protein Homology CDS 212872 213354 . + 0 ID=cds-WP_000568339.1;Parent=gene-AD12_RS06620;Dbxref=GenBank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AD12_RS06620;product=protein YqeJ;protein_id=WP_000568339.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 213387 213467 . - . ID=gene-AD12_RS28190;Name=AD12_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28190 NZ_JJLK01000075.1 Protein Homology CDS 213387 213467 . - 0 ID=cds-WP_000655821.1;Parent=gene-AD12_RS28190;Dbxref=GenBank:WP_000655821.1;Name=WP_000655821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AD12_RS28190;product=hypothetical protein;protein_id=WP_000655821.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 213503 213928 . - . ID=gene-AD12_RS0124680;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AD12_RS0124680 NZ_JJLK01000075.1 Protein Homology CDS 213503 213928 . - 0 ID=cds-WP_001356275.1;Parent=gene-AD12_RS0124680;Dbxref=GenBank:WP_001356275.1;Name=WP_001356275.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AD12_RS0124680;product=protein YqeK;protein_id=WP_001356275.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 214122 214612 . + . ID=gene-AD12_RS0124685;Name=AD12_RS0124685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124685;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 214122 214612 . + 0 ID=cds-AD12_RS0124685;Parent=gene-AD12_RS0124685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AD12_RS0124685;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 214837 215328 . + . ID=gene-AD12_RS0124690;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;locus_tag=AD12_RS0124690 NZ_JJLK01000075.1 Protein Homology CDS 214837 215328 . + 0 ID=cds-WP_000102786.1;Parent=gene-AD12_RS0124690;Dbxref=GenBank:WP_000102786.1;Name=WP_000102786.1;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AD12_RS0124690;product=tetratricopeptide repeat protein;protein_id=WP_000102786.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 215663 217039 . + . ID=gene-AD12_RS06615;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AD12_RS06615;old_locus_tag=AD12_3432 NZ_JJLK01000075.1 Protein Homology CDS 215663 217039 . + 0 ID=cds-WP_000362702.1;Parent=gene-AD12_RS06615;Dbxref=GenBank:WP_000362702.1;Name=WP_000362702.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AD12_RS06615;product=HilA family transcriptional regulator YgeH;protein_id=WP_000362702.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 217207 217425 . + . ID=gene-AD12_RS0124695;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=AD12_RS0124695 NZ_JJLK01000075.1 Protein Homology CDS 217207 217425 . + 0 ID=cds-WP_000184091.1;Parent=gene-AD12_RS0124695;Dbxref=GenBank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AD12_RS0124695;product=protein YgeI;protein_id=WP_000184091.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 217508 218010 . + . ID=gene-AD12_RS0124700;Name=AD12_RS0124700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124700;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 217508 218010 . + 0 ID=cds-AD12_RS0124700;Parent=gene-AD12_RS0124700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843029.1;locus_tag=AD12_RS0124700;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 218029 218661 . - . ID=gene-AD12_RS0124705;Name=AD12_RS0124705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124705;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 218029 218661 . - 0 ID=cds-AD12_RS0124705;Parent=gene-AD12_RS0124705;Note=internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AD12_RS0124705;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 218882 219313 . - . ID=gene-AD12_RS29195;Name=AD12_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29195 NZ_JJLK01000075.1 Protein Homology CDS 218882 219313 . - 0 ID=cds-WP_001299900.1;Parent=gene-AD12_RS29195;Dbxref=GenBank:WP_001299900.1;Name=WP_001299900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701978.1;locus_tag=AD12_RS29195;product=hypothetical protein;protein_id=WP_001299900.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 219297 219500 . - . ID=gene-AD12_RS29815;Name=AD12_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29815 NZ_JJLK01000075.1 Protein Homology CDS 219297 219500 . - 0 ID=cds-WP_313768100.1;Parent=gene-AD12_RS29815;Dbxref=GenBank:WP_313768100.1;Name=WP_313768100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364974.1;locus_tag=AD12_RS29815;product=hypothetical protein;protein_id=WP_313768100.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 219529 220110 . - . ID=gene-AD12_RS27155;Name=AD12_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS27155 NZ_JJLK01000075.1 Protein Homology CDS 219529 220110 . - 0 ID=cds-WP_001341846.1;Parent=gene-AD12_RS27155;Dbxref=GenBank:WP_001341846.1;Name=WP_001341846.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AD12_RS27155;product=type III secretion apparatus protein OrgA/MxiK;protein_id=WP_001341846.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 220126 220860 . - . ID=gene-AD12_RS06605;Name=AD12_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06605;old_locus_tag=AD12_3436 NZ_JJLK01000075.1 Protein Homology CDS 220126 220860 . - 0 ID=cds-WP_000875234.1;Parent=gene-AD12_RS06605;Dbxref=GenBank:WP_000875234.1;Name=WP_000875234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AD12_RS06605;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875234.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 220857 221131 . - . ID=gene-AD12_RS28205;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=pseudogene;locus_tag=AD12_RS28205;old_locus_tag=AD12_3437;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 220857 221131 . - 0 ID=cds-AD12_RS28205;Parent=gene-AD12_RS28205;Note=frameshifted;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322788.1;locus_tag=AD12_RS28205;product=type III secretion system inner rod subunit SctI;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 221208 221448 . - . ID=gene-AD12_RS27160;Name=AD12_RS27160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27160;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 221208 221448 . - 0 ID=cds-AD12_RS27160;Parent=gene-AD12_RS27160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AD12_RS27160;product=type III secretion system needle complex protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 221462 222643 . - . ID=gene-AD12_RS06590;Name=AD12_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06590;old_locus_tag=AD12_3439 NZ_JJLK01000075.1 Protein Homology CDS 221462 222643 . - 0 ID=cds-WP_001365813.1;Parent=gene-AD12_RS06590;Dbxref=GenBank:WP_001365813.1;Name=WP_001365813.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AD12_RS06590;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_001365813.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 222901 223401 . + . ID=gene-AD12_RS0124725;Name=AD12_RS0124725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124725 NZ_JJLK01000075.1 Protein Homology CDS 222901 223401 . + 0 ID=cds-WP_001195871.1;Parent=gene-AD12_RS0124725;Dbxref=GenBank:WP_001195871.1;Name=WP_001195871.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AD12_RS0124725;product=helix-turn-helix transcriptional regulator;protein_id=WP_001195871.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 223403 223696 . + . ID=gene-AD12_RS0124730;Name=AD12_RS0124730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124730 NZ_JJLK01000075.1 Protein Homology CDS 223403 223696 . + 0 ID=cds-WP_000060557.1;Parent=gene-AD12_RS0124730;Dbxref=GenBank:WP_000060557.1;Name=WP_000060557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=AD12_RS0124730;product=invasion protein;protein_id=WP_000060557.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 223758 224916 . - . ID=gene-AD12_RS06575;Name=AD12_RS06575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS06575;old_locus_tag=AD12_3442;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 223758 224916 . - 0 ID=cds-AD12_RS06575;Parent=gene-AD12_RS06575;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=AD12_RS06575;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 224925 225692 . - . ID=gene-AD12_RS06570;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AD12_RS06570;old_locus_tag=AD12_3443 NZ_JJLK01000075.1 Protein Homology CDS 224925 225692 . - 0 ID=cds-WP_000390568.1;Parent=gene-AD12_RS06570;Dbxref=GenBank:WP_000390568.1;Name=WP_000390568.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=AD12_RS06570;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000390568.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 225694 225954 . - . ID=gene-AD12_RS06565;Name=AD12_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06565;old_locus_tag=AD12_3444 NZ_JJLK01000075.1 Protein Homology CDS 225694 225954 . - 0 ID=cds-WP_000998122.1;Parent=gene-AD12_RS06565;Dbxref=GenBank:WP_000998122.1;Name=WP_000998122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AD12_RS06565;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000998122.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 225964 226629 . - . ID=gene-AD12_RS0124735;Name=AD12_RS0124735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124735;old_locus_tag=AD12_3445 NZ_JJLK01000075.1 Protein Homology CDS 225964 226629 . - 0 ID=cds-WP_000071559.1;Parent=gene-AD12_RS0124735;Dbxref=GenBank:WP_000071559.1;Name=WP_000071559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AD12_RS0124735;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_000071559.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 226619 227606 . - . ID=gene-AD12_RS06560;Name=AD12_RS06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS06560;old_locus_tag=AD12_3446;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 226619 227606 . - 0 ID=cds-AD12_RS06560;Parent=gene-AD12_RS06560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AD12_RS06560;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 227566 227913 . - . ID=gene-AD12_RS29565;Name=AD12_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29565 NZ_JJLK01000075.1 Protein Homology CDS 227566 227913 . - 0 ID=cds-WP_000494996.1;Parent=gene-AD12_RS29565;Dbxref=GenBank:WP_000494996.1;Name=WP_000494996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014559.6;locus_tag=AD12_RS29565;product=SpaN/EivJ family type III secretion system needle length determinant;protein_id=WP_000494996.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 228210 228439 . - . ID=gene-AD12_RS29570;Name=AD12_RS29570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29570;partial=true;pseudo=true;start_range=.,228210 NZ_JJLK01000075.1 Protein Homology CDS 228210 228439 . - 0 ID=cds-AD12_RS29570;Parent=gene-AD12_RS29570;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311755.1;locus_tag=AD12_RS29570;partial=true;product=type III secretion protein;pseudo=true;start_range=.,228210;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 228417 228873 . - . ID=gene-AD12_RS0124750;Name=AD12_RS0124750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124750;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 228417 228873 . - 0 ID=cds-AD12_RS0124750;Parent=gene-AD12_RS0124750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311756.2;locus_tag=AD12_RS0124750;product=type III secretion protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 228863 230155 . - . ID=gene-AD12_RS0124755;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=pseudogene;locus_tag=AD12_RS0124755;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 228863 230155 . - 0 ID=cds-AD12_RS0124755;Parent=gene-AD12_RS0124755;Note=internal stop;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311757.2;locus_tag=AD12_RS0124755;product=type III secretion system ATPase SctN;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 230187 230747 . - . ID=gene-AD12_RS0124760;Name=AD12_RS0124760;end_range=230747,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124760;partial=true;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 230187 230747 . - 0 ID=cds-AD12_RS0124760;Parent=gene-AD12_RS0124760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0016020;end_range=230747,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311758.1;locus_tag=AD12_RS0124760;partial=true;product=FHIPEP family type III secretion protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 230726 230848 . - . ID=gene-AD12_RS0124765;Name=AD12_RS0124765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124765;partial=true;pseudo=true;start_range=.,230726 NZ_JJLK01000075.1 Protein Homology CDS 230726 230848 . - 0 ID=cds-AD12_RS0124765;Parent=gene-AD12_RS0124765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311761.1;locus_tag=AD12_RS0124765;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,230726;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 231194 231373 . - . ID=gene-AD12_RS0124770;Name=AD12_RS0124770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124770 NZ_JJLK01000075.1 Protein Homology CDS 231194 231373 . - 0 ID=cds-WP_001364891.1;Parent=gene-AD12_RS0124770;Dbxref=GenBank:WP_001364891.1;Name=WP_001364891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311762.1;locus_tag=AD12_RS0124770;product=GhoT/OrtT family toxin;protein_id=WP_001364891.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 231440 233050 . - . ID=gene-AD12_RS06555;Name=AD12_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06555;old_locus_tag=AD12_3453 NZ_JJLK01000075.1 Protein Homology CDS 231440 233050 . - 0 ID=cds-WP_050480836.1;Parent=gene-AD12_RS06555;Dbxref=GenBank:WP_050480836.1;Name=WP_050480836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613747.1;locus_tag=AD12_RS06555;product=glycoside hydrolase family 15 protein;protein_id=WP_050480836.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 233284 233357 . - . ID=gene-AD12_RS06550;Name=AD12_RS06550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS06550;old_locus_tag=AD12_3454 NZ_JJLK01000075.1 tRNAscan-SE tRNA 233284 233357 . - . ID=rna-AD12_RS06550;Parent=gene-AD12_RS06550;anticodon=(pos:complement(233323..233325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06550;product=tRNA-Gly NZ_JJLK01000075.1 tRNAscan-SE exon 233284 233357 . - . ID=exon-AD12_RS06550-1;Parent=rna-AD12_RS06550;anticodon=(pos:complement(233323..233325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06550;product=tRNA-Gly NZ_JJLK01000075.1 RefSeq gene 233436 234191 . - . ID=gene-AD12_RS06545;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AD12_RS06545;old_locus_tag=AD12_3455 NZ_JJLK01000075.1 Protein Homology CDS 233436 234191 . - 0 ID=cds-WP_001301085.1;Parent=gene-AD12_RS06545;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AD12_RS06545;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 234606 236903 . + . ID=gene-AD12_RS06540;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AD12_RS06540;old_locus_tag=AD12_3456 NZ_JJLK01000075.1 Protein Homology CDS 234606 236903 . + 0 ID=cds-WP_001430791.1;Parent=gene-AD12_RS06540;Dbxref=GenBank:WP_001430791.1;Name=WP_001430791.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AD12_RS06540;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_001430791.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 236914 237792 . + . ID=gene-AD12_RS06535;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AD12_RS06535;old_locus_tag=AD12_3457 NZ_JJLK01000075.1 Protein Homology CDS 236914 237792 . + 0 ID=cds-WP_000459206.1;Parent=gene-AD12_RS06535;Dbxref=GenBank:WP_000459206.1;Name=WP_000459206.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311767.1;locus_tag=AD12_RS06535;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459206.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 237789 238268 . + . ID=gene-AD12_RS06530;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AD12_RS06530;old_locus_tag=AD12_3458 NZ_JJLK01000075.1 Protein Homology CDS 237789 238268 . + 0 ID=cds-WP_001016605.1;Parent=gene-AD12_RS06530;Dbxref=GenBank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AD12_RS06530;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 238308 240086 . - . ID=gene-AD12_RS06525;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AD12_RS06525;old_locus_tag=AD12_3459 NZ_JJLK01000075.1 Protein Homology CDS 238308 240086 . - 0 ID=cds-WP_032286663.1;Parent=gene-AD12_RS06525;Dbxref=GenBank:WP_032286663.1;Name=WP_032286663.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311769.1;locus_tag=AD12_RS06525;product=sigma-54 interaction domain-containing protein;protein_id=WP_032286663.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 240565 241752 . + . ID=gene-AD12_RS06520;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AD12_RS06520;old_locus_tag=AD12_3460 NZ_JJLK01000075.1 Protein Homology CDS 240565 241752 . + 0 ID=cds-WP_000859787.1;Parent=gene-AD12_RS06520;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AD12_RS06520;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 241810 243006 . + . ID=gene-AD12_RS06515;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AD12_RS06515;old_locus_tag=AD12_3461 NZ_JJLK01000075.1 Protein Homology CDS 241810 243006 . + 0 ID=cds-WP_032286664.1;Parent=gene-AD12_RS06515;Dbxref=GenBank:WP_032286664.1;Name=WP_032286664.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AD12_RS06515;product=diaminopropionate ammonia-lyase;protein_id=WP_032286664.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 243064 244275 . + . ID=gene-AD12_RS06510;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AD12_RS06510;old_locus_tag=AD12_3462 NZ_JJLK01000075.1 Protein Homology CDS 243064 244275 . + 0 ID=cds-WP_001107125.1;Parent=gene-AD12_RS06510;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AD12_RS06510;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 244328 245713 . + . ID=gene-AD12_RS06505;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AD12_RS06505;old_locus_tag=AD12_3463 NZ_JJLK01000075.1 Protein Homology CDS 244328 245713 . + 0 ID=cds-WP_001264447.1;Parent=gene-AD12_RS06505;Dbxref=GenBank:WP_001264447.1;Name=WP_001264447.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AD12_RS06505;product=D-phenylhydantoinase;protein_id=WP_001264447.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 245761 246693 . + . ID=gene-AD12_RS06500;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AD12_RS06500;old_locus_tag=AD12_3464 NZ_JJLK01000075.1 Protein Homology CDS 245761 246693 . + 0 ID=cds-WP_000037992.1;Parent=gene-AD12_RS06500;Dbxref=GenBank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AD12_RS06500;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 246734 248359 . - . ID=gene-AD12_RS06495;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AD12_RS06495;old_locus_tag=AD12_3465 NZ_JJLK01000075.1 Protein Homology CDS 246734 248359 . - 0 ID=cds-WP_032286666.1;Parent=gene-AD12_RS06495;Dbxref=GenBank:WP_032286666.1;Name=WP_032286666.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AD12_RS06495;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_032286666.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 248407 249177 . - . ID=gene-AD12_RS0124780;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AD12_RS0124780 NZ_JJLK01000075.1 Protein Homology CDS 248407 249177 . - 0 ID=cds-WP_000836480.1;Parent=gene-AD12_RS0124780;Dbxref=GenBank:WP_000836480.1;Name=WP_000836480.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311776.2;locus_tag=AD12_RS0124780;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_000836480.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 249280 249858 . + . ID=gene-AD12_RS06490;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AD12_RS06490;old_locus_tag=AD12_3467 NZ_JJLK01000075.1 Protein Homology CDS 249280 249858 . + 0 ID=cds-WP_001272853.1;Parent=gene-AD12_RS06490;Dbxref=GenBank:WP_001272853.1;Name=WP_001272853.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311777.1;locus_tag=AD12_RS06490;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272853.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 250180 253278 . + . ID=gene-AD12_RS06485;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AD12_RS06485;old_locus_tag=AD12_3468 NZ_JJLK01000075.1 Protein Homology CDS 250180 253278 . + 0 ID=cds-WP_000502402.1;Parent=gene-AD12_RS06485;Dbxref=GenBank:WP_000502402.1;Name=WP_000502402.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311778.1;locus_tag=AD12_RS06485;product=putative selenate reductase subunit YgfK;protein_id=WP_000502402.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 253281 254609 . + . ID=gene-AD12_RS06480;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AD12_RS06480;old_locus_tag=AD12_3469 NZ_JJLK01000075.1 Protein Homology CDS 253281 254609 . + 0 ID=cds-WP_000906231.1;Parent=gene-AD12_RS06480;Dbxref=GenBank:WP_000906231.1;Name=WP_000906231.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311779.1;locus_tag=AD12_RS06480;product=putative aminohydrolase SsnA;protein_id=WP_000906231.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 254660 255439 . + . ID=gene-AD12_RS06475;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AD12_RS06475;old_locus_tag=AD12_3470 NZ_JJLK01000075.1 Protein Homology CDS 254660 255439 . + 0 ID=cds-WP_000572469.1;Parent=gene-AD12_RS06475;Dbxref=GenBank:WP_000572469.1;Name=WP_000572469.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AD12_RS06475;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572469.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 255436 258306 . + . ID=gene-AD12_RS06470;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AD12_RS06470;old_locus_tag=AD12_3471 NZ_JJLK01000075.1 Protein Homology CDS 255436 258306 . + 0 ID=cds-WP_000583622.1;Parent=gene-AD12_RS06470;Dbxref=GenBank:WP_000583622.1;Name=WP_000583622.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AD12_RS06470;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583622.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 258471 259871 . + . ID=gene-AD12_RS06465;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AD12_RS06465;old_locus_tag=AD12_3472 NZ_JJLK01000075.1 Protein Homology CDS 258471 259871 . + 0 ID=cds-WP_005761223.1;Parent=gene-AD12_RS06465;Dbxref=GenBank:WP_005761223.1;Name=WP_005761223.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AD12_RS06465;product=xanthine/proton symporter XanQ;protein_id=WP_005761223.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 259889 261205 . + . ID=gene-AD12_RS06460;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AD12_RS06460;old_locus_tag=AD12_3473 NZ_JJLK01000075.1 Protein Homology CDS 259889 261205 . + 0 ID=cds-WP_001299798.1;Parent=gene-AD12_RS06460;Dbxref=GenBank:WP_001299798.1;Name=WP_001299798.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AD12_RS06460;product=guanine deaminase;protein_id=WP_001299798.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 261241 262608 . + . ID=gene-AD12_RS06455;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AD12_RS06455;old_locus_tag=AD12_3474 NZ_JJLK01000075.1 Protein Homology CDS 261241 262608 . + 0 ID=cds-WP_000012163.1;Parent=gene-AD12_RS06455;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AD12_RS06455;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 262644 263132 . - . ID=gene-AD12_RS06450;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AD12_RS06450;old_locus_tag=AD12_3475 NZ_JJLK01000075.1 Protein Homology CDS 262644 263132 . - 0 ID=cds-WP_000838428.1;Parent=gene-AD12_RS06450;Dbxref=GenBank:WP_000838428.1;Name=WP_000838428.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AD12_RS06450;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 263132 265051 . - . ID=gene-AD12_RS06445;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AD12_RS06445;old_locus_tag=AD12_3476 NZ_JJLK01000075.1 Protein Homology CDS 263132 265051 . - 0 ID=cds-WP_001356277.1;Parent=gene-AD12_RS06445;Dbxref=GenBank:WP_001356277.1;Name=WP_001356277.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AD12_RS06445;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_001356277.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 265487 266935 . + . ID=gene-AD12_RS06440;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AD12_RS06440;old_locus_tag=AD12_3478 NZ_JJLK01000075.1 Protein Homology CDS 265487 266935 . + 0 ID=cds-WP_001356278.1;Parent=gene-AD12_RS06440;Dbxref=GenBank:WP_001356278.1;Name=WP_001356278.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AD12_RS06440;product=urate/proton symporter UacT;protein_id=WP_001356278.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 266937 267062 . + . ID=gene-AD12_RS06435;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AD12_RS06435;old_locus_tag=AD12_3479 NZ_JJLK01000075.1 Protein Homology CDS 266937 267062 . + 0 ID=cds-WP_001010156.1;Parent=gene-AD12_RS06435;Dbxref=GenBank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AD12_RS06435;product=protein YqfG;protein_id=WP_001010156.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 267059 267130 . - . ID=gene-AD12_RS28830;Name=AD12_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28830 NZ_JJLK01000075.1 Protein Homology CDS 267059 267130 . - 0 ID=cds-WP_122633157.1;Parent=gene-AD12_RS28830;Dbxref=GenBank:WP_122633157.1;Name=WP_122633157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AD12_RS28830;product=hypothetical protein;protein_id=WP_122633157.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 267185 267733 . + . ID=gene-AD12_RS06430;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AD12_RS06430;old_locus_tag=AD12_3480 NZ_JJLK01000075.1 Protein Homology CDS 267185 267733 . + 0 ID=cds-WP_001192804.1;Parent=gene-AD12_RS06430;Dbxref=GenBank:WP_001192804.1;Name=WP_001192804.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708654.1;locus_tag=AD12_RS06430;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192804.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 267776 269293 . - . ID=gene-AD12_RS06425;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD12_RS06425;old_locus_tag=AD12_3481 NZ_JJLK01000075.1 Protein Homology CDS 267776 269293 . - 0 ID=cds-WP_000003068.1;Parent=gene-AD12_RS06425;Dbxref=GenBank:WP_000003068.1;Name=WP_000003068.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD12_RS06425;product=lysine--tRNA ligase;protein_id=WP_000003068.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 269303 270401 . - . ID=gene-AD12_RS06420;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AD12_RS06420;old_locus_tag=AD12_3482 NZ_JJLK01000075.1 Protein Homology CDS 270327 270401 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD12_RS06420;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD12_RS06420;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLK01000075.1 Protein Homology CDS 269303 270325 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD12_RS06420;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD12_RS06420;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 270492 272225 . - . ID=gene-AD12_RS06415;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AD12_RS06415;old_locus_tag=AD12_3484 NZ_JJLK01000075.1 Protein Homology CDS 270492 272225 . - 0 ID=cds-WP_032173527.1;Parent=gene-AD12_RS06415;Dbxref=GenBank:WP_032173527.1;Name=WP_032173527.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708656.1;locus_tag=AD12_RS06415;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032173527.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 272231 272941 . - . ID=gene-AD12_RS06410;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AD12_RS06410;old_locus_tag=AD12_3485 NZ_JJLK01000075.1 Protein Homology CDS 272231 272941 . - 0 ID=cds-WP_000715214.1;Parent=gene-AD12_RS06410;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AD12_RS06410;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 272966 273862 . - . ID=gene-AD12_RS06405;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AD12_RS06405;old_locus_tag=AD12_3486 NZ_JJLK01000075.1 Protein Homology CDS 272966 273862 . - 0 ID=cds-WP_000806638.1;Parent=gene-AD12_RS06405;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AD12_RS06405;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 273974 274495 . + . ID=gene-AD12_RS06400;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AD12_RS06400;old_locus_tag=AD12_3487 NZ_JJLK01000075.1 Protein Homology CDS 273974 274495 . + 0 ID=cds-WP_001055874.1;Parent=gene-AD12_RS06400;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AD12_RS06400;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 274535 274942 . - . ID=gene-AD12_RS06395;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AD12_RS06395;old_locus_tag=AD12_3488 NZ_JJLK01000075.1 Protein Homology CDS 274535 274942 . - 0 ID=cds-WP_000244777.1;Parent=gene-AD12_RS06395;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AD12_RS06395;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 274923 275189 . - . ID=gene-AD12_RS06390;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AD12_RS06390;old_locus_tag=AD12_3489 NZ_JJLK01000075.1 Protein Homology CDS 274923 275189 . - 0 ID=cds-WP_000354046.1;Parent=gene-AD12_RS06390;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AD12_RS06390;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 275432 276412 . + . ID=gene-AD12_RS06385;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AD12_RS06385;old_locus_tag=AD12_3491 NZ_JJLK01000075.1 Protein Homology CDS 275432 276412 . + 0 ID=cds-WP_000886062.1;Parent=gene-AD12_RS06385;Dbxref=GenBank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AD12_RS06385;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 276489 277148 . - . ID=gene-AD12_RS06380;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AD12_RS06380;old_locus_tag=AD12_3492 NZ_JJLK01000075.1 Protein Homology CDS 276489 277148 . - 0 ID=cds-WP_000250274.1;Parent=gene-AD12_RS06380;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AD12_RS06380;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 277312 277623 . - . ID=gene-AD12_RS06375;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AD12_RS06375;old_locus_tag=AD12_3493 NZ_JJLK01000075.1 Protein Homology CDS 277312 277623 . - 0 ID=cds-WP_001182954.1;Parent=gene-AD12_RS06375;Dbxref=GenBank:WP_001182954.1;Name=WP_001182954.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AD12_RS06375;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182954.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 277668 279101 . + . ID=gene-AD12_RS06370;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AD12_RS06370;old_locus_tag=AD12_3494 NZ_JJLK01000075.1 Protein Homology CDS 277668 279101 . + 0 ID=cds-WP_001363803.1;Parent=gene-AD12_RS06370;Dbxref=GenBank:WP_001363803.1;Name=WP_001363803.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AD12_RS06370;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001363803.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 279158 279901 . - . ID=gene-AD12_RS06365;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AD12_RS06365;old_locus_tag=AD12_3495 NZ_JJLK01000075.1 Protein Homology CDS 279158 279901 . - 0 ID=cds-WP_000951948.1;Parent=gene-AD12_RS06365;Dbxref=GenBank:WP_000951948.1;Name=WP_000951948.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AD12_RS06365;product=SDR family oxidoreductase;protein_id=WP_000951948.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 280167 283040 . - . ID=gene-AD12_RS06360;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AD12_RS06360;old_locus_tag=AD12_3496 NZ_JJLK01000075.1 Protein Homology CDS 280167 283040 . - 0 ID=cds-WP_000195049.1;Parent=gene-AD12_RS06360;Dbxref=GenBank:WP_000195049.1;Name=WP_000195049.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=AD12_RS06360;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000195049.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 283158 283547 . - . ID=gene-AD12_RS06355;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AD12_RS06355;old_locus_tag=AD12_3497 NZ_JJLK01000075.1 Protein Homology CDS 283158 283547 . - 0 ID=cds-WP_001295377.1;Parent=gene-AD12_RS06355;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AD12_RS06355;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 283571 284665 . - . ID=gene-AD12_RS06350;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AD12_RS06350;old_locus_tag=AD12_3498 NZ_JJLK01000075.1 Protein Homology CDS 283571 284665 . - 0 ID=cds-WP_000068701.1;Parent=gene-AD12_RS06350;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AD12_RS06350;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 284956 285039 . + . ID=gene-AD12_RS28835;Name=AD12_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28835 NZ_JJLK01000075.1 Protein Homology CDS 284956 285039 . + 0 ID=cds-WP_122633141.1;Parent=gene-AD12_RS28835;Dbxref=GenBank:WP_122633141.1;Name=WP_122633141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AD12_RS28835;product=hypothetical protein;protein_id=WP_122633141.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 285113 286315 . - . ID=gene-AD12_RS06345;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AD12_RS06345;old_locus_tag=AD12_3500 NZ_JJLK01000075.1 Protein Homology CDS 285113 286315 . - 0 ID=cds-WP_001192197.1;Parent=gene-AD12_RS06345;Dbxref=GenBank:WP_001192197.1;Name=WP_001192197.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AD12_RS06345;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192197.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 286338 287516 . - . ID=gene-AD12_RS06340;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AD12_RS06340;old_locus_tag=AD12_3501 NZ_JJLK01000075.1 Protein Homology CDS 286338 287516 . - 0 ID=cds-WP_000111229.1;Parent=gene-AD12_RS06340;Dbxref=GenBank:WP_000111229.1;Name=WP_000111229.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AD12_RS06340;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111229.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 287513 288838 . - . ID=gene-AD12_RS06335;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AD12_RS06335;old_locus_tag=AD12_3502 NZ_JJLK01000075.1 Protein Homology CDS 287513 288838 . - 0 ID=cds-WP_001290129.1;Parent=gene-AD12_RS06335;Dbxref=GenBank:WP_001290129.1;Name=WP_001290129.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708671.1;locus_tag=AD12_RS06335;product=Xaa-Pro aminopeptidase;protein_id=WP_001290129.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 288864 289442 . - . ID=gene-AD12_RS06330;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AD12_RS06330;old_locus_tag=AD12_3503 NZ_JJLK01000075.1 Protein Homology CDS 288864 289442 . - 0 ID=cds-WP_001295378.1;Parent=gene-AD12_RS06330;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AD12_RS06330;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 289610 289939 . + . ID=gene-AD12_RS06325;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AD12_RS06325;old_locus_tag=AD12_3504 NZ_JJLK01000075.1 Protein Homology CDS 289610 289939 . + 0 ID=cds-WP_001276008.1;Parent=gene-AD12_RS06325;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AD12_RS06325;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 289981 290164 . + . ID=gene-AD12_RS25820;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AD12_RS25820 NZ_JJLK01000075.1 cmsearch ncRNA 289981 290164 . + . ID=rna-AD12_RS25820;Parent=gene-AD12_RS25820;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25820;product=6S RNA NZ_JJLK01000075.1 cmsearch exon 289981 290164 . + . ID=exon-AD12_RS25820-1;Parent=rna-AD12_RS25820;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25820;product=6S RNA NZ_JJLK01000075.1 RefSeq gene 290185 290787 . + . ID=gene-AD12_RS06320;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AD12_RS06320;old_locus_tag=AD12_3505 NZ_JJLK01000075.1 Protein Homology CDS 290185 290787 . + 0 ID=cds-WP_000192748.1;Parent=gene-AD12_RS06320;Dbxref=GenBank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AD12_RS06320;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 290888 290947 . - . ID=gene-AD12_RS28840;Name=AD12_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28840 NZ_JJLK01000075.1 Protein Homology CDS 290888 290947 . - 0 ID=cds-WP_001387035.1;Parent=gene-AD12_RS28840;Dbxref=GenBank:WP_001387035.1;Name=WP_001387035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AD12_RS28840;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387035.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 291280 291339 . - . ID=gene-AD12_RS27180;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AD12_RS27180 NZ_JJLK01000075.1 Protein Homology CDS 291280 291339 . - 0 ID=cds-WP_071524576.1;Parent=gene-AD12_RS27180;Dbxref=GenBank:WP_071524576.1;Name=WP_071524576.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AD12_RS27180;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_071524576.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 291569 292801 . - . ID=gene-AD12_RS06315;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AD12_RS06315;old_locus_tag=AD12_3507 NZ_JJLK01000075.1 Protein Homology CDS 291569 292801 . - 0 ID=cds-WP_001151604.1;Parent=gene-AD12_RS06315;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AD12_RS06315;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 293057 293716 . - . ID=gene-AD12_RS06310;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AD12_RS06310;old_locus_tag=AD12_3509 NZ_JJLK01000075.1 Protein Homology CDS 293057 293716 . - 0 ID=cds-WP_000189743.1;Parent=gene-AD12_RS06310;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AD12_RS06310;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 293772 294002 . - . ID=gene-AD12_RS06305;Name=AD12_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06305;old_locus_tag=AD12_3510 NZ_JJLK01000075.1 Protein Homology CDS 293772 294002 . - 0 ID=cds-WP_001328908.1;Parent=gene-AD12_RS06305;Dbxref=GenBank:WP_001328908.1;Name=WP_001328908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AD12_RS06305;product=hypothetical protein;protein_id=WP_001328908.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 294144 295037 . + . ID=gene-AD12_RS06300;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AD12_RS06300;old_locus_tag=AD12_3511 NZ_JJLK01000075.1 Protein Homology CDS 294144 295037 . + 0 ID=cds-WP_000828351.1;Parent=gene-AD12_RS06300;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AD12_RS06300;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 295241 297385 . + . ID=gene-AD12_RS28845;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=pseudogene;locus_tag=AD12_RS28845;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 295241 297385 . + 0 ID=cds-AD12_RS28845;Parent=gene-AD12_RS28845;Note=internal stop;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311814.1;locus_tag=AD12_RS28845;product=methylmalonyl-CoA mutase;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 297378 298373 . + . ID=gene-AD12_RS06285;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AD12_RS06285;old_locus_tag=AD12_3515 NZ_JJLK01000075.1 Protein Homology CDS 297378 298373 . + 0 ID=cds-WP_000606533.1;Parent=gene-AD12_RS06285;Dbxref=GenBank:WP_000606533.1;Name=WP_000606533.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AD12_RS06285;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606533.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 298384 299169 . + . ID=gene-AD12_RS06280;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AD12_RS06280;old_locus_tag=AD12_3516 NZ_JJLK01000075.1 Protein Homology CDS 298384 299169 . + 0 ID=cds-WP_000122080.1;Parent=gene-AD12_RS06280;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AD12_RS06280;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 299193 300671 . + . ID=gene-AD12_RS06275;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AD12_RS06275;old_locus_tag=AD12_3517 NZ_JJLK01000075.1 Protein Homology CDS 299193 300671 . + 0 ID=cds-WP_032286668.1;Parent=gene-AD12_RS06275;Dbxref=GenBank:WP_032286668.1;Name=WP_032286668.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AD12_RS06275;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_032286668.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 300668 301564 . - . ID=gene-AD12_RS06270;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AD12_RS06270;old_locus_tag=AD12_3518 NZ_JJLK01000075.1 Protein Homology CDS 300668 301564 . - 0 ID=cds-WP_000350811.1;Parent=gene-AD12_RS06270;Dbxref=GenBank:WP_000350811.1;Name=WP_000350811.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AD12_RS06270;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350811.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 301731 302471 . - . ID=gene-AD12_RS06265;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AD12_RS06265;old_locus_tag=AD12_3519 NZ_JJLK01000075.1 Protein Homology CDS 301731 302471 . - 0 ID=cds-WP_000669834.1;Parent=gene-AD12_RS06265;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AD12_RS06265;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 302564 303199 . - . ID=gene-AD12_RS06260;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AD12_RS06260;old_locus_tag=AD12_3520 NZ_JJLK01000075.1 Protein Homology CDS 302564 303199 . - 0 ID=cds-WP_000493360.1;Parent=gene-AD12_RS06260;Dbxref=GenBank:WP_000493360.1;Name=WP_000493360.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311821.1;locus_tag=AD12_RS06260;product=arginine exporter ArgO;protein_id=WP_000493360.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 303338 304198 . - . ID=gene-AD12_RS06255;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AD12_RS06255;old_locus_tag=AD12_3521 NZ_JJLK01000075.1 Protein Homology CDS 303338 304198 . - 0 ID=cds-WP_000389818.1;Parent=gene-AD12_RS06255;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AD12_RS06255;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 304556 305635 . - . ID=gene-AD12_RS06250;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AD12_RS06250;old_locus_tag=AD12_3522 NZ_JJLK01000075.1 Protein Homology CDS 304556 305635 . - 0 ID=cds-WP_000034372.1;Parent=gene-AD12_RS06250;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AD12_RS06250;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 305850 307013 . - . ID=gene-AD12_RS06245;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AD12_RS06245;old_locus_tag=AD12_3523 NZ_JJLK01000075.1 Protein Homology CDS 305850 307013 . - 0 ID=cds-WP_000111269.1;Parent=gene-AD12_RS06245;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AD12_RS06245;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 307063 308082 . - . ID=gene-AD12_RS06240;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AD12_RS06240;old_locus_tag=AD12_3524 NZ_JJLK01000075.1 Protein Homology CDS 307063 308082 . - 0 ID=cds-WP_000218480.1;Parent=gene-AD12_RS06240;Dbxref=GenBank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AD12_RS06240;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 308454 308885 . + . ID=gene-AD12_RS06235;Name=AD12_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06235;old_locus_tag=AD12_3525 NZ_JJLK01000075.1 Protein Homology CDS 308454 308885 . + 0 ID=cds-WP_000988702.1;Parent=gene-AD12_RS06235;Dbxref=GenBank:WP_000988702.1;Name=WP_000988702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311826.1;locus_tag=AD12_RS06235;product=PPC domain-containing DNA-binding protein;protein_id=WP_000988702.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 308908 309486 . + . ID=gene-AD12_RS06230;Name=AD12_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06230;old_locus_tag=AD12_3526 NZ_JJLK01000075.1 Protein Homology CDS 308908 309486 . + 0 ID=cds-WP_000124312.1;Parent=gene-AD12_RS06230;Dbxref=GenBank:WP_000124312.1;Name=WP_000124312.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311827.1;locus_tag=AD12_RS06230;product=ECF transporter S component;protein_id=WP_000124312.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 309487 310194 . + . ID=gene-AD12_RS06225;Name=AD12_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06225;old_locus_tag=AD12_3527 NZ_JJLK01000075.1 Protein Homology CDS 309487 310194 . + 0 ID=cds-WP_000553224.1;Parent=gene-AD12_RS06225;Dbxref=GenBank:WP_000553224.1;Name=WP_000553224.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311828.1;locus_tag=AD12_RS06225;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553224.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 310182 310859 . + . ID=gene-AD12_RS06220;Name=AD12_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06220;old_locus_tag=AD12_3528 NZ_JJLK01000075.1 Protein Homology CDS 310182 310859 . + 0 ID=cds-WP_000256969.1;Parent=gene-AD12_RS06220;Dbxref=GenBank:WP_000256969.1;Name=WP_000256969.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311829.1;locus_tag=AD12_RS06220;product=ABC transporter ATP-binding protein;protein_id=WP_000256969.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 310853 311530 . + . ID=gene-AD12_RS06215;Name=AD12_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06215;old_locus_tag=AD12_3529 NZ_JJLK01000075.1 Protein Homology CDS 310853 311530 . + 0 ID=cds-WP_000956871.1;Parent=gene-AD12_RS06215;Dbxref=GenBank:WP_000956871.1;Name=WP_000956871.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708691.2;locus_tag=AD12_RS06215;product=ABC transporter ATP-binding protein;protein_id=WP_000956871.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 311502 312215 . - . ID=gene-AD12_RS06210;Name=AD12_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06210;old_locus_tag=AD12_3530 NZ_JJLK01000075.1 Protein Homology CDS 311502 312215 . - 0 ID=cds-WP_000687768.1;Parent=gene-AD12_RS06210;Dbxref=GenBank:WP_000687768.1;Name=WP_000687768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708692.1;locus_tag=AD12_RS06210;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687768.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 312212 312721 . - . ID=gene-AD12_RS06205;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AD12_RS06205;old_locus_tag=AD12_3531 NZ_JJLK01000075.1 Protein Homology CDS 312212 312721 . - 0 ID=cds-WP_000224138.1;Parent=gene-AD12_RS06205;Dbxref=GenBank:WP_000224138.1;Name=WP_000224138.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=AD12_RS06205;product=fumarase E;protein_id=WP_000224138.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 312743 313708 . - . ID=gene-AD12_RS06200;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD12_RS06200;old_locus_tag=AD12_3532 NZ_JJLK01000075.1 Protein Homology CDS 312743 313708 . - 0 ID=cds-WP_000987277.1;Parent=gene-AD12_RS06200;Dbxref=GenBank:WP_000987277.1;Name=WP_000987277.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AD12_RS06200;product=class II fructose-bisphosphatase;protein_id=WP_000987277.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 313705 314982 . - . ID=gene-AD12_RS06195;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AD12_RS06195;old_locus_tag=AD12_3533 NZ_JJLK01000075.1 Protein Homology CDS 313705 314982 . - 0 ID=cds-WP_000853221.1;Parent=gene-AD12_RS06195;Dbxref=GenBank:WP_000853221.1;Name=WP_000853221.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311834.1;locus_tag=AD12_RS06195;product=zinc-binding dehydrogenase;protein_id=WP_000853221.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 314997 316385 . - . ID=gene-AD12_RS06190;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AD12_RS06190;old_locus_tag=AD12_3534 NZ_JJLK01000075.1 Protein Homology CDS 314997 316385 . - 0 ID=cds-WP_000428805.1;Parent=gene-AD12_RS06190;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AD12_RS06190;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 316413 316856 . - . ID=gene-AD12_RS06185;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AD12_RS06185;old_locus_tag=AD12_3535 NZ_JJLK01000075.1 Protein Homology CDS 316413 316856 . - 0 ID=cds-WP_001239650.1;Parent=gene-AD12_RS06185;Dbxref=GenBank:WP_001239650.1;Name=WP_001239650.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AD12_RS06185;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239650.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 317170 319161 . - . ID=gene-AD12_RS06180;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD12_RS06180;old_locus_tag=AD12_3536 NZ_JJLK01000075.1 Protein Homology CDS 317170 319161 . - 0 ID=cds-WP_000098614.1;Parent=gene-AD12_RS06180;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AD12_RS06180;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 319439 320197 . + . ID=gene-AD12_RS06175;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AD12_RS06175;old_locus_tag=AD12_3537 NZ_JJLK01000075.1 Protein Homology CDS 319439 320197 . + 0 ID=cds-WP_032286669.1;Parent=gene-AD12_RS06175;Dbxref=GenBank:WP_032286669.1;Name=WP_032286669.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=AD12_RS06175;product=metalloprotease LoiP;protein_id=WP_032286669.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 320403 321323 . - . ID=gene-AD12_RS06170;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AD12_RS06170;old_locus_tag=AD12_3538 NZ_JJLK01000075.1 Protein Homology CDS 320403 321323 . - 0 ID=cds-WP_000105566.1;Parent=gene-AD12_RS06170;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AD12_RS06170;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 321459 322190 . - . ID=gene-AD12_RS06165;Name=AD12_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06165;old_locus_tag=AD12_3539 NZ_JJLK01000075.1 Protein Homology CDS 321459 322190 . - 0 ID=cds-WP_000758917.1;Parent=gene-AD12_RS06165;Dbxref=GenBank:WP_000758917.1;Name=WP_000758917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311840.1;locus_tag=AD12_RS06165;product=hypothetical protein;protein_id=WP_000758917.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 322336 324312 . - . ID=gene-AD12_RS06160;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AD12_RS06160;old_locus_tag=AD12_3540 NZ_JJLK01000075.1 Protein Homology CDS 322336 324312 . - 0 ID=cds-WP_001295380.1;Parent=gene-AD12_RS06160;Dbxref=GenBank:WP_001295380.1;Name=WP_001295380.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=AD12_RS06160;product=biosynthetic arginine decarboxylase;protein_id=WP_001295380.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 324321 324452 . - . ID=gene-AD12_RS06155;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AD12_RS06155;old_locus_tag=AD12_3541 NZ_JJLK01000075.1 Protein Homology CDS 324321 324452 . - 0 ID=cds-WP_001297406.1;Parent=gene-AD12_RS06155;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AD12_RS06155;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 324546 324689 . - . ID=gene-AD12_RS29720;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AD12_RS29720 NZ_JJLK01000075.1 Protein Homology CDS 324546 324689 . - 0 ID=cds-WP_001297404.1;Parent=gene-AD12_RS29720;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AD12_RS29720;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 324800 325051 . - . ID=gene-AD12_RS29725;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AD12_RS29725 NZ_JJLK01000075.1 Protein Homology CDS 324800 325051 . - 0 ID=cds-WP_001303651.1;Parent=gene-AD12_RS29725;Dbxref=GenBank:WP_001303651.1;Name=WP_001303651.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AD12_RS29725;product=protein YqgD;protein_id=WP_001303651.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 325107 326261 . + . ID=gene-AD12_RS06150;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AD12_RS06150;old_locus_tag=AD12_3543 NZ_JJLK01000075.1 Protein Homology CDS 325107 326261 . + 0 ID=cds-WP_001062128.1;Parent=gene-AD12_RS06150;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AD12_RS06150;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 326697 328091 . + . ID=gene-AD12_RS06145;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AD12_RS06145;old_locus_tag=AD12_3544 NZ_JJLK01000075.1 Protein Homology CDS 326697 328091 . + 0 ID=cds-WP_001112301.1;Parent=gene-AD12_RS06145;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AD12_RS06145;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 328168 328665 . + . ID=gene-AD12_RS06140;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AD12_RS06140;old_locus_tag=AD12_3545 NZ_JJLK01000075.1 Protein Homology CDS 328168 328665 . + 0 ID=cds-WP_000858396.1;Parent=gene-AD12_RS06140;Dbxref=GenBank:WP_000858396.1;Name=WP_000858396.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AD12_RS06140;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000858396.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 328760 329467 . + . ID=gene-AD12_RS06135;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AD12_RS06135;old_locus_tag=AD12_3546 NZ_JJLK01000075.1 Protein Homology CDS 328760 329467 . + 0 ID=cds-WP_000286500.1;Parent=gene-AD12_RS06135;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AD12_RS06135;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 329547 330278 . + . ID=gene-AD12_RS06130;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AD12_RS06130;old_locus_tag=AD12_3547 NZ_JJLK01000075.1 Protein Homology CDS 329547 330278 . + 0 ID=cds-WP_001222508.1;Parent=gene-AD12_RS06130;Dbxref=GenBank:WP_001222508.1;Name=WP_001222508.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AD12_RS06130;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222508.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 330291 331241 . + . ID=gene-AD12_RS06125;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AD12_RS06125;old_locus_tag=AD12_3548 NZ_JJLK01000075.1 Protein Homology CDS 330291 331241 . + 0 ID=cds-WP_001413862.1;Parent=gene-AD12_RS06125;Dbxref=GenBank:WP_001413862.1;Name=WP_001413862.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AD12_RS06125;product=glutathione synthase;protein_id=WP_001413862.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 331350 331913 . + . ID=gene-AD12_RS06120;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AD12_RS06120;old_locus_tag=AD12_3549 NZ_JJLK01000075.1 Protein Homology CDS 331350 331913 . + 0 ID=cds-WP_001053178.1;Parent=gene-AD12_RS06120;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AD12_RS06120;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 331913 332329 . + . ID=gene-AD12_RS06115;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AD12_RS06115;old_locus_tag=AD12_3550 NZ_JJLK01000075.1 Protein Homology CDS 331913 332329 . + 0 ID=cds-WP_000017106.1;Parent=gene-AD12_RS06115;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AD12_RS06115;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 332492 333472 . - . ID=gene-AD12_RS06110;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AD12_RS06110;old_locus_tag=AD12_3551 NZ_JJLK01000075.1 Protein Homology CDS 332492 333472 . - 0 ID=cds-WP_001324408.1;Parent=gene-AD12_RS06110;Dbxref=GenBank:WP_001324408.1;Name=WP_001324408.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AD12_RS06110;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001324408.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 333490 334194 . + . ID=gene-AD12_RS06105;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AD12_RS06105;old_locus_tag=AD12_3552 NZ_JJLK01000075.1 Protein Homology CDS 333490 334194 . + 0 ID=cds-WP_000997795.1;Parent=gene-AD12_RS06105;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AD12_RS06105;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 334212 334778 . + . ID=gene-AD12_RS06100;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AD12_RS06100;old_locus_tag=AD12_3553 NZ_JJLK01000075.1 Protein Homology CDS 334212 334778 . + 0 ID=cds-WP_001094831.1;Parent=gene-AD12_RS06100;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AD12_RS06100;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 334775 335065 . + . ID=gene-AD12_RS06095;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AD12_RS06095;old_locus_tag=AD12_3554 NZ_JJLK01000075.1 Protein Homology CDS 334775 335065 . + 0 ID=cds-WP_001277222.1;Parent=gene-AD12_RS06095;Dbxref=GenBank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AD12_RS06095;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 335073 335666 . + . ID=gene-AD12_RS06090;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AD12_RS06090;old_locus_tag=AD12_3555 NZ_JJLK01000075.1 Protein Homology CDS 335073 335666 . + 0 ID=cds-WP_001174743.1;Parent=gene-AD12_RS06090;Dbxref=GenBank:WP_001174743.1;Name=WP_001174743.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311857.1;locus_tag=AD12_RS06090;product=XTP/dITP diphosphatase;protein_id=WP_001174743.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 335659 336795 . + . ID=gene-AD12_RS06085;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AD12_RS06085;old_locus_tag=AD12_3556 NZ_JJLK01000075.1 Protein Homology CDS 335659 336795 . + 0 ID=cds-WP_000239928.1;Parent=gene-AD12_RS06085;Dbxref=GenBank:WP_000239928.1;Name=WP_000239928.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AD12_RS06085;product=radical SAM family heme chaperone HemW;protein_id=WP_000239928.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 336950 337957 . - . ID=gene-AD12_RS06080;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AD12_RS06080;old_locus_tag=AD12_3557 NZ_JJLK01000075.1 Protein Homology CDS 336950 337957 . - 0 ID=cds-WP_000745217.1;Parent=gene-AD12_RS06080;Dbxref=GenBank:WP_000745217.1;Name=WP_000745217.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AD12_RS06080;product=DUF1202 family protein;protein_id=WP_000745217.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 338074 339120 . - . ID=gene-AD12_RS06075;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AD12_RS06075;old_locus_tag=AD12_3558 NZ_JJLK01000075.1 Protein Homology CDS 338074 339120 . - 0 ID=cds-WP_000394125.1;Parent=gene-AD12_RS06075;Dbxref=GenBank:WP_000394125.1;Name=WP_000394125.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708728.1;locus_tag=AD12_RS06075;product=L-asparaginase 2;protein_id=WP_000394125.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 339296 340015 . - . ID=gene-AD12_RS06070;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AD12_RS06070;old_locus_tag=AD12_3559 NZ_JJLK01000075.1 Protein Homology CDS 339296 340015 . - 0 ID=cds-WP_000984796.1;Parent=gene-AD12_RS06070;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AD12_RS06070;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 340036 340176 . - . ID=gene-AD12_RS29105;Name=AD12_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29105;old_locus_tag=AD12_3560 NZ_JJLK01000075.1 GeneMarkS-2+ CDS 340036 340176 . - 0 ID=cds-WP_032286671.1;Parent=gene-AD12_RS29105;Dbxref=GenBank:WP_032286671.1;Name=WP_032286671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29105;product=hypothetical protein;protein_id=WP_032286671.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 340199 340525 . - . ID=gene-AD12_RS06060;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AD12_RS06060;old_locus_tag=AD12_3561 NZ_JJLK01000075.1 Protein Homology CDS 340199 340525 . - 0 ID=cds-WP_001107564.1;Parent=gene-AD12_RS06060;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AD12_RS06060;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 340525 341244 . - . ID=gene-AD12_RS06055;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AD12_RS06055;old_locus_tag=AD12_3562 NZ_JJLK01000075.1 Protein Homology CDS 340525 341244 . - 0 ID=cds-WP_000786911.1;Parent=gene-AD12_RS06055;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AD12_RS06055;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 341405 342457 . + . ID=gene-AD12_RS06050;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AD12_RS06050;old_locus_tag=AD12_3563 NZ_JJLK01000075.1 Protein Homology CDS 341405 342457 . + 0 ID=cds-WP_001295382.1;Parent=gene-AD12_RS06050;Dbxref=GenBank:WP_001295382.1;Name=WP_001295382.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311864.1;locus_tag=AD12_RS06050;product=A/G-specific adenine glycosylase;protein_id=WP_001295382.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 342485 342760 . + . ID=gene-AD12_RS06045;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AD12_RS06045;old_locus_tag=AD12_3564 NZ_JJLK01000075.1 Protein Homology CDS 342485 342760 . + 0 ID=cds-WP_000091700.1;Parent=gene-AD12_RS06045;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AD12_RS06045;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 342825 343904 . + . ID=gene-AD12_RS06040;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AD12_RS06040;old_locus_tag=AD12_3565 NZ_JJLK01000075.1 Protein Homology CDS 342825 343904 . + 0 ID=cds-WP_000760323.1;Parent=gene-AD12_RS06040;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AD12_RS06040;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 344106 345362 . + . ID=gene-AD12_RS06035;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AD12_RS06035;old_locus_tag=AD12_3566 NZ_JJLK01000075.1 Protein Homology CDS 344106 345362 . + 0 ID=cds-WP_001049791.1;Parent=gene-AD12_RS06035;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AD12_RS06035;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 345412 347547 . - . ID=gene-AD12_RS06030;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AD12_RS06030;old_locus_tag=AD12_3567 NZ_JJLK01000075.1 Protein Homology CDS 345412 347547 . - 0 ID=cds-WP_000839748.1;Parent=gene-AD12_RS06030;Dbxref=GenBank:WP_000839748.1;Name=WP_000839748.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311868.2;locus_tag=AD12_RS06030;product=ornithine decarboxylase;protein_id=WP_000839748.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 347709 347792 . - . ID=gene-AD12_RS29310;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AD12_RS29310 NZ_JJLK01000075.1 Protein Homology CDS 347709 347792 . - 0 ID=cds-WP_212591416.1;Parent=gene-AD12_RS29310;Dbxref=GenBank:WP_212591416.1;Name=WP_212591416.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AD12_RS29310;product=hypothetical protein;protein_id=WP_212591416.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 347945 348652 . + . ID=gene-AD12_RS06025;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AD12_RS06025;old_locus_tag=AD12_3568 NZ_JJLK01000075.1 Protein Homology CDS 347945 348652 . + 0 ID=cds-WP_000234526.1;Parent=gene-AD12_RS06025;Dbxref=GenBank:WP_000234526.1;Name=WP_000234526.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AD12_RS06025;product=DUF554 domain-containing protein;protein_id=WP_000234526.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 348758 348833 . + . ID=gene-AD12_RS06020;Name=AD12_RS06020;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS06020;old_locus_tag=AD12_3569 NZ_JJLK01000075.1 tRNAscan-SE tRNA 348758 348833 . + . ID=rna-AD12_RS06020;Parent=gene-AD12_RS06020;anticodon=(pos:348791..348793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06020;product=tRNA-Phe NZ_JJLK01000075.1 tRNAscan-SE exon 348758 348833 . + . ID=exon-AD12_RS06020-1;Parent=rna-AD12_RS06020;anticodon=(pos:348791..348793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS06020;product=tRNA-Phe NZ_JJLK01000075.1 RefSeq gene 349031 350293 . + . ID=gene-AD12_RS06015;Name=AD12_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06015;old_locus_tag=AD12_3570 NZ_JJLK01000075.1 Protein Homology CDS 349031 350293 . + 0 ID=cds-WP_032286672.1;Parent=gene-AD12_RS06015;Dbxref=GenBank:WP_032286672.1;Name=WP_032286672.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AD12_RS06015;product=tyrosine-type recombinase/integrase;protein_id=WP_032286672.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 350745 354089 . + . ID=gene-AD12_RS29205;Name=AD12_RS29205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29205;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 350745 354089 . + 0 ID=cds-AD12_RS29205;Parent=gene-AD12_RS29205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708739.1;locus_tag=AD12_RS29205;product=AAA domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 354198 355697 . - . ID=gene-AD12_RS28855;Name=AD12_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28855;old_locus_tag=AD12_3574 NZ_JJLK01000075.1 Protein Homology CDS 354198 355697 . - 0 ID=cds-WP_032286673.1;Parent=gene-AD12_RS28855;Dbxref=GenBank:WP_032286673.1;Name=WP_032286673.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AD12_RS28855;product=phosphoethanolamine transferase;protein_id=WP_032286673.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 355857 356519 . - . ID=gene-AD12_RS06005;Name=AD12_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS06005;old_locus_tag=AD12_3575 NZ_JJLK01000075.1 Protein Homology CDS 355857 356519 . - 0 ID=cds-WP_249403665.1;Parent=gene-AD12_RS06005;Dbxref=GenBank:WP_249403665.1;Name=WP_249403665.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048636.1;locus_tag=AD12_RS06005;product=outer membrane protein;protein_id=WP_249403665.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 356523 356699 . - . ID=gene-AD12_RS29575;Name=AD12_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29575;old_locus_tag=AD12_3576 NZ_JJLK01000075.1 GeneMarkS-2+ CDS 356523 356699 . - 0 ID=cds-WP_249403663.1;Parent=gene-AD12_RS29575;Dbxref=GenBank:WP_249403663.1;Name=WP_249403663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29575;product=hypothetical protein;protein_id=WP_249403663.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 356834 357205 . + . ID=gene-AD12_RS29820;Name=AD12_RS29820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29820;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 356834 357205 . + 0 ID=cds-AD12_RS29820;Parent=gene-AD12_RS29820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293133.1;locus_tag=AD12_RS29820;product=H-NS family nucleoid-associated regulatory protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 357628 357738 . - . ID=gene-AD12_RS29580;Name=AD12_RS29580;end_range=357738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29580;old_locus_tag=AD12_3579;partial=true;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 357628 357738 . - 0 ID=cds-AD12_RS29580;Parent=gene-AD12_RS29580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=357738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557954.1;locus_tag=AD12_RS29580;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 357860 358529 . - . ID=gene-AD12_RS29925;Name=AD12_RS29925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29925;partial=true;pseudo=true;start_range=.,357860 NZ_JJLK01000075.1 Protein Homology CDS 357860 358529 . - 0 ID=cds-AD12_RS29925;Parent=gene-AD12_RS29925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_416234890.1;locus_tag=AD12_RS29925;partial=true;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;start_range=.,357860;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 358771 359724 . - . ID=gene-AD12_RS0124815;Name=AD12_RS0124815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124815;old_locus_tag=AD12_3581 NZ_JJLK01000075.1 Protein Homology CDS 358771 359724 . - 0 ID=cds-WP_032286675.1;Parent=gene-AD12_RS0124815;Dbxref=GenBank:WP_032286675.1;Name=WP_032286675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309690.1;locus_tag=AD12_RS0124815;product=omptin family outer membrane protease;protein_id=WP_032286675.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 360082 361624 . + . ID=gene-AD12_RS28255;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AD12_RS28255;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 360082 361624 . + 0 ID=cds-AD12_RS28255;Parent=gene-AD12_RS28255;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=AD12_RS28255;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 361642 362460 . + . ID=gene-AD12_RS29115;Name=AD12_RS29115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29115;old_locus_tag=AD12_3586;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 361642 362460 . + 0 ID=cds-AD12_RS29115;Parent=gene-AD12_RS29115;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121260.1;locus_tag=AD12_RS29115;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 362537 364135 . - . ID=gene-AD12_RS29120;Name=AD12_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29120 NZ_JJLK01000075.1 Protein Homology CDS 362537 364135 . - 0 ID=cds-WP_187439333.1;Parent=gene-AD12_RS29120;Dbxref=GenBank:WP_187439333.1;Name=WP_187439333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.6;locus_tag=AD12_RS29120;product=YadA-like family protein;protein_id=WP_187439333.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 365301 365534 . - . ID=gene-AD12_RS29600;Name=AD12_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29600 NZ_JJLK01000075.1 Protein Homology CDS 365301 365534 . - 0 ID=cds-WP_032286677.1;Parent=gene-AD12_RS29600;Dbxref=GenBank:WP_032286677.1;Name=WP_032286677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683555.1;locus_tag=AD12_RS29600;product=hypothetical protein;protein_id=WP_032286677.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 366129 367172 . + . ID=gene-AD12_RS05990;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=AD12_RS05990;old_locus_tag=AD12_3588 NZ_JJLK01000075.1 Protein Homology CDS 366129 367172 . + 0 ID=cds-WP_032286678.1;Parent=gene-AD12_RS05990;Dbxref=GenBank:WP_032286678.1;Name=WP_032286678.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=AD12_RS05990;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_032286678.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 367176 367994 . + . ID=gene-AD12_RS05985;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=AD12_RS05985;old_locus_tag=AD12_3589 NZ_JJLK01000075.1 Protein Homology CDS 367176 367994 . + 0 ID=cds-WP_032286679.1;Parent=gene-AD12_RS05985;Dbxref=GenBank:WP_032286679.1;Name=WP_032286679.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=AD12_RS05985;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_032286679.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 368005 369015 . + . ID=gene-AD12_RS05980;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=AD12_RS05980;old_locus_tag=AD12_3590 NZ_JJLK01000075.1 Protein Homology CDS 368005 369015 . + 0 ID=cds-WP_032286680.1;Parent=gene-AD12_RS05980;Dbxref=GenBank:WP_032286680.1;Name=WP_032286680.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000109843.1;locus_tag=AD12_RS05980;product=sulfite reductase subunit C;protein_id=WP_032286680.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 369460 369738 . + . ID=gene-AD12_RS29730;Name=AD12_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29730;old_locus_tag=AD12_3591 NZ_JJLK01000075.1 Protein Homology CDS 369460 369738 . + 0 ID=cds-WP_000015547.1;Parent=gene-AD12_RS29730;Dbxref=GenBank:WP_000015547.1;Name=WP_000015547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=AD12_RS29730;product=IS3 family transposase;protein_id=WP_000015547.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 369795 370100 . + . ID=gene-AD12_RS29735;Name=AD12_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29735;old_locus_tag=AD12_3592 NZ_JJLK01000075.1 Protein Homology CDS 369795 370100 . + 0 ID=cds-WP_283205566.1;Parent=gene-AD12_RS29735;Dbxref=GenBank:WP_283205566.1;Name=WP_283205566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.6;locus_tag=AD12_RS29735;product=IS3 family transposase;protein_id=WP_283205566.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 370030 370596 . + . ID=gene-AD12_RS29740;Name=AD12_RS29740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29740;old_locus_tag=AD12_3593;partial=true;pseudo=true;start_range=.,370030 NZ_JJLK01000075.1 Protein Homology CDS 370030 370596 . + 0 ID=cds-AD12_RS29740;Parent=gene-AD12_RS29740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=AD12_RS29740;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,370030;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 370956 371798 . + . ID=gene-AD12_RS25835;Name=AD12_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS25835;old_locus_tag=AD12_3594 NZ_JJLK01000075.1 Protein Homology CDS 370956 371798 . + 0 ID=cds-WP_064734973.1;Parent=gene-AD12_RS25835;Dbxref=GenBank:WP_064734973.1;Name=WP_064734973.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AD12_RS25835;product=helix-turn-helix transcriptional regulator;protein_id=WP_064734973.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 372208 372480 . + . ID=gene-AD12_RS0124860;Name=AD12_RS0124860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124860 NZ_JJLK01000075.1 Protein Homology CDS 372208 372480 . + 0 ID=cds-WP_032286681.1;Parent=gene-AD12_RS0124860;Dbxref=GenBank:WP_032286681.1;Name=WP_032286681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015301.6;locus_tag=AD12_RS0124860;product=adhesin biosynthesis transcription regulatory family protein;protein_id=WP_032286681.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 372557 373072 . + . ID=gene-AD12_RS05970;Name=AD12_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05970;old_locus_tag=AD12_3596 NZ_JJLK01000075.1 Protein Homology CDS 372557 373072 . + 0 ID=cds-WP_032286683.1;Parent=gene-AD12_RS05970;Dbxref=GenBank:WP_032286683.1;Name=WP_032286683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542550.1;locus_tag=AD12_RS05970;product=F107 fimbrial protein;protein_id=WP_032286683.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 373172 375577 . + . ID=gene-AD12_RS05965;Name=pefC;gbkey=Gene;gene=pefC;gene_biotype=protein_coding;locus_tag=AD12_RS05965;old_locus_tag=AD12_3597 NZ_JJLK01000075.1 Protein Homology CDS 373172 375577 . + 0 ID=cds-WP_032286684.1;Parent=gene-AD12_RS05965;Dbxref=GenBank:WP_032286684.1;Name=WP_032286684.1;gbkey=CDS;gene=pefC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747724.1;locus_tag=AD12_RS05965;product=PefC/AfrB family outer membrane usher protein;protein_id=WP_032286684.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 375570 376262 . + . ID=gene-AD12_RS05960;Name=AD12_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05960;old_locus_tag=AD12_3598 NZ_JJLK01000075.1 Protein Homology CDS 375570 376262 . + 0 ID=cds-WP_032286685.1;Parent=gene-AD12_RS05960;Dbxref=GenBank:WP_032286685.1;Name=WP_032286685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031680.1;locus_tag=AD12_RS05960;product=fimbrial chaperone;protein_id=WP_032286685.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 376249 376770 . + . ID=gene-AD12_RS05955;Name=AD12_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05955;old_locus_tag=AD12_3599 NZ_JJLK01000075.1 Protein Homology CDS 376249 376770 . + 0 ID=cds-WP_032286686.1;Parent=gene-AD12_RS05955;Dbxref=GenBank:WP_032286686.1;Name=WP_032286686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542554.1;locus_tag=AD12_RS05955;product=hypothetical protein;protein_id=WP_032286686.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 378401 379252 . + . ID=gene-AD12_RS05950;Name=AD12_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05950;old_locus_tag=AD12_3601 NZ_JJLK01000075.1 GeneMarkS-2+ CDS 378401 379252 . + 0 ID=cds-WP_032286687.1;Parent=gene-AD12_RS05950;Dbxref=GenBank:WP_032286687.1;Name=WP_032286687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS05950;product=hypothetical protein;protein_id=WP_032286687.1;transl_table=11 NZ_JJLK01000075.1 RefSeq pseudogene 379520 380215 . + . ID=gene-AD12_RS27290;Name=AD12_RS27290;end_range=380215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27290;partial=true;pseudo=true NZ_JJLK01000075.1 Protein Homology CDS 379520 380215 . + 0 ID=cds-AD12_RS27290;Parent=gene-AD12_RS27290;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=380215,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AD12_RS27290;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 380268 380702 . - . ID=gene-AD12_RS05940;Name=AD12_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05940;old_locus_tag=AD12_3603 NZ_JJLK01000075.1 Protein Homology CDS 380268 380702 . - 0 ID=cds-WP_032286689.1;Parent=gene-AD12_RS05940;Dbxref=GenBank:WP_032286689.1;Name=WP_032286689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556209.1;locus_tag=AD12_RS05940;product=zinc-ribbon domain-containing protein;protein_id=WP_032286689.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 380690 381091 . - . ID=gene-AD12_RS0124865;Name=AD12_RS0124865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124865 NZ_JJLK01000075.1 Protein Homology CDS 380690 381091 . - 0 ID=cds-WP_032286690.1;Parent=gene-AD12_RS0124865;Dbxref=GenBank:WP_032286690.1;Name=WP_032286690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020115.1;locus_tag=AD12_RS0124865;product=putative zinc ribbon protein;protein_id=WP_032286690.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 381350 381919 . - . ID=gene-AD12_RS05935;Name=AD12_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05935;old_locus_tag=AD12_3604 NZ_JJLK01000075.1 Protein Homology CDS 381350 381919 . - 0 ID=cds-WP_001399348.1;Parent=gene-AD12_RS05935;Dbxref=GenBank:WP_001399348.1;Name=WP_001399348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AD12_RS05935;product=inovirus Gp2 family protein;protein_id=WP_001399348.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 382119 382316 . + . ID=gene-AD12_RS29605;Name=AD12_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29605;old_locus_tag=AD12_3605 NZ_JJLK01000075.1 Protein Homology CDS 382119 382316 . + 0 ID=cds-WP_001399349.1;Parent=gene-AD12_RS29605;Dbxref=GenBank:WP_001399349.1;Name=WP_001399349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399349.1;locus_tag=AD12_RS29605;product=hypothetical protein;protein_id=WP_001399349.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 382546 382758 . - . ID=gene-AD12_RS05930;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD12_RS05930;old_locus_tag=AD12_3606 NZ_JJLK01000075.1 Protein Homology CDS 382546 382758 . - 0 ID=cds-WP_021534027.1;Parent=gene-AD12_RS05930;Dbxref=GenBank:WP_021534027.1;Name=WP_021534027.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453335.1;locus_tag=AD12_RS05930;product=hemolysin expression modulator Hha;protein_id=WP_021534027.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 383478 383684 . + . ID=gene-AD12_RS28270;Name=AD12_RS28270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28270;old_locus_tag=AD12_3608 NZ_JJLK01000075.1 Protein Homology CDS 383478 383684 . + 0 ID=cds-WP_000211310.1;Parent=gene-AD12_RS28270;Dbxref=GenBank:WP_000211310.1;Name=WP_000211310.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AD12_RS28270;product=helix-turn-helix transcriptional regulator;protein_id=WP_000211310.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 383779 384381 . + . ID=gene-AD12_RS05925;Name=AD12_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05925;old_locus_tag=AD12_3609 NZ_JJLK01000075.1 Protein Homology CDS 383779 384381 . + 0 ID=cds-WP_001387788.1;Parent=gene-AD12_RS05925;Dbxref=GenBank:WP_001387788.1;Name=WP_001387788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546339.1;locus_tag=AD12_RS05925;product=hypothetical protein;protein_id=WP_001387788.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 384522 384662 . + . ID=gene-AD12_RS29125;Name=AD12_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29125;old_locus_tag=AD12_3610 NZ_JJLK01000075.1 GeneMarkS-2+ CDS 384522 384662 . + 0 ID=cds-WP_187439334.1;Parent=gene-AD12_RS29125;Dbxref=GenBank:WP_187439334.1;Name=WP_187439334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29125;product=hypothetical protein;protein_id=WP_187439334.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 384943 385368 . + . ID=gene-AD12_RS05920;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD12_RS05920;old_locus_tag=AD12_3611 NZ_JJLK01000075.1 Protein Homology CDS 384943 385368 . + 0 ID=cds-WP_000422741.1;Parent=gene-AD12_RS05920;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD12_RS05920;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 385365 385715 . + . ID=gene-AD12_RS05915;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD12_RS05915;old_locus_tag=AD12_3612 NZ_JJLK01000075.1 Protein Homology CDS 385365 385715 . + 0 ID=cds-WP_000624722.1;Parent=gene-AD12_RS05915;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD12_RS05915;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 385746 387359 . + . ID=gene-AD12_RS05910;Name=AD12_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05910;old_locus_tag=AD12_3613 NZ_JJLK01000075.1 Protein Homology CDS 385746 387359 . + 0 ID=cds-WP_064734974.1;Parent=gene-AD12_RS05910;Dbxref=GenBank:WP_064734974.1;Name=WP_064734974.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD12_RS05910;product=IS66-like element ISEc23 family transposase;protein_id=WP_064734974.1;transl_table=11 NZ_JJLK01000075.1 RefSeq gene 388065 388349 . + . ID=gene-AD12_RS05905;Name=AD12_RS05905;end_range=388349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05905;old_locus_tag=AD12_3614;partial=true NZ_JJLK01000075.1 Protein Homology CDS 388065 388349 . + 0 ID=cds-WP_032198353.1;Parent=gene-AD12_RS05905;Dbxref=GenBank:WP_032198353.1;Name=WP_032198353.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=388349,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD12_RS05905;partial=true;product=transposase;protein_id=WP_032198353.1;transl_table=11 ##sequence-region NZ_JJLK01000076.1 1 23735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000076.1 RefSeq region 1 23735 . + . ID=NZ_JJLK01000076.1:1..23735;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000076.1 RefSeq gene 1 213 . + . ID=gene-AD12_RS0124885;Name=AD12_RS0124885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124885;old_locus_tag=AD12_3615;partial=true;start_range=.,1 NZ_JJLK01000076.1 Protein Homology CDS 1 213 . + 0 ID=cds-WP_001509541.1-2;Parent=gene-AD12_RS0124885;Dbxref=GenBank:WP_001509541.1;Name=WP_001509541.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD12_RS0124885;partial=true;product=integrase core domain-containing protein;protein_id=WP_001509541.1;start_range=.,1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 1437 2630 . + . ID=gene-AD12_RS05900;Name=AD12_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05900;old_locus_tag=AD12_3616 NZ_JJLK01000076.1 Protein Homology CDS 1437 2630 . + 0 ID=cds-WP_000450494.1;Parent=gene-AD12_RS05900;Dbxref=GenBank:WP_000450494.1;Name=WP_000450494.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450492.1;locus_tag=AD12_RS05900;product=CobW family GTP-binding protein;protein_id=WP_000450494.1;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 2793 3080 . + . ID=gene-AD12_RS29930;Name=AD12_RS29930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29930;partial=true;pseudo=true;start_range=.,2793 NZ_JJLK01000076.1 Protein Homology CDS 2793 3080 . + 0 ID=cds-AD12_RS29930;Parent=gene-AD12_RS29930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD12_RS29930;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2793;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 3267 4656 . + . ID=gene-AD12_RS27310;Name=AD12_RS27310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27310;pseudo=true NZ_JJLK01000076.1 Protein Homology CDS 3267 4656 . + 0 ID=cds-AD12_RS27310;Parent=gene-AD12_RS27310;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996655.1;locus_tag=AD12_RS27310;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 4891 5832 . + . ID=gene-AD12_RS05895;Name=AD12_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05895;old_locus_tag=AD12_3618 NZ_JJLK01000076.1 Protein Homology CDS 4891 5832 . + 0 ID=cds-WP_000974762.1;Parent=gene-AD12_RS05895;Dbxref=GenBank:WP_000974762.1;Name=WP_000974762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974763.1;locus_tag=AD12_RS05895;product=STM4504/CBY_0614 family protein;protein_id=WP_000974762.1;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 5961 6155 . - . ID=gene-AD12_RS0124910;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AD12_RS0124910;partial=true;pseudo=true;start_range=.,5961 NZ_JJLK01000076.1 Protein Homology CDS 5961 6155 . - 0 ID=cds-AD12_RS0124910;Parent=gene-AD12_RS0124910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526115.1;locus_tag=AD12_RS0124910;partial=true;product=IS200/IS605-like element IS200C family transposase;pseudo=true;start_range=.,5961;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 6629 7999 . - . ID=gene-AD12_RS05890;Name=AD12_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05890;old_locus_tag=AD12_3619 NZ_JJLK01000076.1 Protein Homology CDS 6629 7999 . - 0 ID=cds-WP_001312828.1;Parent=gene-AD12_RS05890;Dbxref=GenBank:WP_001312828.1;Name=WP_001312828.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318212.1;locus_tag=AD12_RS05890;product=TolC family protein;protein_id=WP_001312828.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 8003 9943 . - . ID=gene-AD12_RS05885;Name=AD12_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05885;old_locus_tag=AD12_3620 NZ_JJLK01000076.1 Protein Homology CDS 8003 9943 . - 0 ID=cds-WP_000733252.1;Parent=gene-AD12_RS05885;Dbxref=GenBank:WP_000733252.1;Name=WP_000733252.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693757.1;locus_tag=AD12_RS05885;product=MacB family efflux pump subunit;protein_id=WP_000733252.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 9940 11127 . - . ID=gene-AD12_RS05880;Name=AD12_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05880;old_locus_tag=AD12_3621 NZ_JJLK01000076.1 Protein Homology CDS 9940 11127 . - 0 ID=cds-WP_000928804.1;Parent=gene-AD12_RS05880;Dbxref=GenBank:WP_000928804.1;Name=WP_000928804.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000928803.1;locus_tag=AD12_RS05880;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000928804.1;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 11722 11990 . - . ID=gene-AD12_RS29610;Name=AD12_RS29610;end_range=11990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29610;partial=true;pseudo=true NZ_JJLK01000076.1 Protein Homology CDS 11722 11990 . - 0 ID=cds-AD12_RS29610;Parent=gene-AD12_RS29610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=11990,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558297.1;locus_tag=AD12_RS29610;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 12072 12433 . + . ID=gene-AD12_RS27325;Name=AD12_RS27325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27325;partial=true;pseudo=true;start_range=.,12072 NZ_JJLK01000076.1 Protein Homology CDS 12072 12433 . + 0 ID=cds-AD12_RS27325;Parent=gene-AD12_RS27325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AD12_RS27325;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,12072;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 12581 13794 . - . ID=gene-AD12_RS05875;Name=AD12_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05875;old_locus_tag=AD12_3624 NZ_JJLK01000076.1 Protein Homology CDS 13506 13794 . - 0 ID=cds-WP_182638387.1;Parent=gene-AD12_RS05875;Dbxref=GenBank:WP_182638387.1;Name=WP_182638387.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AD12_RS05875;product=IS3 family transposase;protein_id=WP_182638387.1;transl_table=11 NZ_JJLK01000076.1 Protein Homology CDS 12581 13506 . - 2 ID=cds-WP_182638387.1;Parent=gene-AD12_RS05875;Dbxref=GenBank:WP_182638387.1;Name=WP_182638387.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AD12_RS05875;product=IS3 family transposase;protein_id=WP_182638387.1;transl_table=11 NZ_JJLK01000076.1 cmsearch sequence_feature 13397 13513 . - . ID=id-AD12_RS05875;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS05875 NZ_JJLK01000076.1 RefSeq pseudogene 13933 14156 . + . ID=gene-AD12_RS27330;Name=AD12_RS27330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27330;old_locus_tag=AD12_3626;partial=true;pseudo=true;start_range=.,13933 NZ_JJLK01000076.1 Protein Homology CDS 13933 14156 . + 0 ID=cds-AD12_RS27330;Parent=gene-AD12_RS27330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=AD12_RS27330;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,13933;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 15409 16362 . + . ID=gene-AD12_RS05865;Name=AD12_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05865;old_locus_tag=AD12_3629 NZ_JJLK01000076.1 Protein Homology CDS 15409 16362 . + 0 ID=cds-WP_000280980.1;Parent=gene-AD12_RS05865;Dbxref=GenBank:WP_000280980.1;Name=WP_000280980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280980.1;locus_tag=AD12_RS05865;product=omptin family outer membrane protease;protein_id=WP_000280980.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 16795 17904 . + . ID=gene-AD12_RS05860;Name=AD12_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05860;old_locus_tag=AD12_3630 NZ_JJLK01000076.1 Protein Homology CDS 16795 17904 . + 0 ID=cds-WP_000771475.1;Parent=gene-AD12_RS05860;Dbxref=GenBank:WP_000771475.1;Name=WP_000771475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149557.1;locus_tag=AD12_RS05860;product=SDR family oxidoreductase;protein_id=WP_000771475.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 17973 18875 . + . ID=gene-AD12_RS05855;Name=AD12_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05855;old_locus_tag=AD12_3631 NZ_JJLK01000076.1 Protein Homology CDS 17973 18875 . + 0 ID=cds-WP_001312822.1;Parent=gene-AD12_RS05855;Dbxref=GenBank:WP_001312822.1;Name=WP_001312822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701512.1;locus_tag=AD12_RS05855;product=antimicrobial resistance protein Mig-14;protein_id=WP_001312822.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 19558 20298 . + . ID=gene-AD12_RS0124950;Name=AD12_RS0124950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124950 NZ_JJLK01000076.1 Protein Homology CDS 19558 20298 . + 0 ID=cds-WP_001514245.1;Parent=gene-AD12_RS0124950;Dbxref=GenBank:WP_001514245.1;Name=WP_001514245.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=AD12_RS0124950;product=tyrosine-type recombinase/integrase;protein_id=WP_001514245.1;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 20583 21560 . - . ID=gene-AD12_RS05850;Name=AD12_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05850;old_locus_tag=AD12_3633 NZ_JJLK01000076.1 Protein Homology CDS 20583 21560 . - 0 ID=cds-WP_000361611.1;Parent=gene-AD12_RS05850;Dbxref=GenBank:WP_000361611.1;Name=WP_000361611.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=AD12_RS05850;product=RepB family plasmid replication initiator protein;protein_id=WP_000361611.1;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 22306 22635 . + . ID=gene-AD12_RS0124965;Name=AD12_RS0124965;end_range=22635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124965;partial=true;pseudo=true NZ_JJLK01000076.1 Protein Homology CDS 22306 22635 . + 0 ID=cds-AD12_RS0124965;Parent=gene-AD12_RS0124965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=AD12_RS0124965;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 22628 22735 . + . ID=gene-AD12_RS28870;Name=AD12_RS28870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28870;partial=true;pseudo=true;start_range=.,22628 NZ_JJLK01000076.1 Protein Homology CDS 22628 22735 . + 0 ID=cds-AD12_RS28870;Parent=gene-AD12_RS28870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AD12_RS28870;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,22628;transl_table=11 NZ_JJLK01000076.1 RefSeq pseudogene 22796 23309 . + . ID=gene-AD12_RS0124970;Name=AD12_RS0124970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0124970;partial=true;pseudo=true;start_range=.,22796 NZ_JJLK01000076.1 Protein Homology CDS 22796 23309 . + 0 ID=cds-AD12_RS0124970;Parent=gene-AD12_RS0124970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566943.1;locus_tag=AD12_RS0124970;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,22796;transl_table=11 NZ_JJLK01000076.1 RefSeq gene 23489 23735 . - . ID=gene-AD12_RS05845;Name=AD12_RS05845;end_range=23735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05845;old_locus_tag=AD12_3636;partial=true NZ_JJLK01000076.1 Protein Homology CDS 23489 23735 . - 1 ID=cds-WP_000055351.1;Parent=gene-AD12_RS05845;Dbxref=GenBank:WP_000055351.1;Name=WP_000055351.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=23735,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD12_RS05845;partial=true;product=IS1 family transposase;protein_id=WP_000055351.1;transl_table=11 ##sequence-region NZ_JJLK01000077.1 1 340309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000077.1 RefSeq region 1 340309 . + . ID=NZ_JJLK01000077.1:1..340309;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000077.1 RefSeq gene 199 567 . + . ID=gene-AD12_RS05840;Name=AD12_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05840;old_locus_tag=AD12_3638 NZ_JJLK01000077.1 Protein Homology CDS 199 567 . + 0 ID=cds-WP_001295723.1;Parent=gene-AD12_RS05840;Dbxref=GenBank:WP_001295723.1;Name=WP_001295723.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280950.1;locus_tag=AD12_RS05840;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001295723.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 657 1034 . + . ID=gene-AD12_RS0124985;Name=AD12_RS0124985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0124985 NZ_JJLK01000077.1 Protein Homology CDS 657 1034 . + 0 ID=cds-WP_032286705.1;Parent=gene-AD12_RS0124985;Dbxref=GenBank:WP_032286705.1;Name=WP_032286705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757701.1;locus_tag=AD12_RS0124985;product=TA system toxin CbtA family protein;protein_id=WP_032286705.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 1031 1519 . + . ID=gene-AD12_RS05835;Name=AD12_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05835;old_locus_tag=AD12_3640 NZ_JJLK01000077.1 Protein Homology CDS 1031 1519 . + 0 ID=cds-WP_032286707.1;Parent=gene-AD12_RS05835;Dbxref=GenBank:WP_032286707.1;Name=WP_032286707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=AD12_RS05835;product=DUF5983 family protein;protein_id=WP_032286707.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 1531 1728 . + . ID=gene-AD12_RS05830;Name=AD12_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05830;old_locus_tag=AD12_3641 NZ_JJLK01000077.1 Protein Homology CDS 1531 1728 . + 0 ID=cds-WP_000839243.1;Parent=gene-AD12_RS05830;Dbxref=GenBank:WP_000839243.1;Name=WP_000839243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AD12_RS05830;product=DUF957 domain-containing protein;protein_id=WP_000839243.1;transl_table=11 NZ_JJLK01000077.1 RefSeq pseudogene 1817 2665 . + . ID=gene-AD12_RS29135;Name=AD12_RS29135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29135;pseudo=true NZ_JJLK01000077.1 Protein Homology CDS 1817 2665 . + 0 ID=cds-AD12_RS29135;Parent=gene-AD12_RS29135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564112.1;locus_tag=AD12_RS29135;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 2736 4271 . + . ID=gene-AD12_RS05815;Name=AD12_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05815;old_locus_tag=AD12_3645 NZ_JJLK01000077.1 Protein Homology CDS 2736 4271 . + 0 ID=cds-WP_032286710.1;Parent=gene-AD12_RS05815;Dbxref=GenBank:WP_032286710.1;Name=WP_032286710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492886.1;locus_tag=AD12_RS05815;product=EAL domain-containing protein;protein_id=WP_032286710.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 4606 5142 . - . ID=gene-AD12_RS05810;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;locus_tag=AD12_RS05810;old_locus_tag=AD12_3646 NZ_JJLK01000077.1 Protein Homology CDS 4606 5142 . - 0 ID=cds-WP_000942786.1;Parent=gene-AD12_RS05810;Dbxref=GenBank:WP_000942786.1;Name=WP_000942786.1;gbkey=CDS;gene=yghD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417442.1;locus_tag=AD12_RS05810;product=GspM family type II secretion system protein YghD;protein_id=WP_000942786.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 5144 6322 . - . ID=gene-AD12_RS0124995;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD12_RS0124995;old_locus_tag=AD12_3647 NZ_JJLK01000077.1 Protein Homology CDS 5144 6322 . - 0 ID=cds-WP_032173535.1;Parent=gene-AD12_RS0124995;Dbxref=GenBank:WP_032173535.1;Name=WP_032173535.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097227.1;locus_tag=AD12_RS0124995;product=type II secretion system protein GspL;protein_id=WP_032173535.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 6319 7296 . - . ID=gene-AD12_RS05805;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AD12_RS05805;old_locus_tag=AD12_3648 NZ_JJLK01000077.1 Protein Homology CDS 6319 7296 . - 0 ID=cds-WP_032286714.1;Parent=gene-AD12_RS05805;Dbxref=GenBank:WP_032286714.1;Name=WP_032286714.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554494.1;locus_tag=AD12_RS05805;product=type II secretion system minor pseudopilin GspK;protein_id=WP_032286714.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 7299 7898 . - . ID=gene-AD12_RS05800;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD12_RS05800;old_locus_tag=AD12_3649 NZ_JJLK01000077.1 Protein Homology CDS 7299 7898 . - 0 ID=cds-WP_001255040.1;Parent=gene-AD12_RS05800;Dbxref=GenBank:WP_001255040.1;Name=WP_001255040.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691118.1;locus_tag=AD12_RS05800;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_001255040.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 7895 8266 . - . ID=gene-AD12_RS05795;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AD12_RS05795;old_locus_tag=AD12_3650 NZ_JJLK01000077.1 Protein Homology CDS 7895 8266 . - 0 ID=cds-WP_000820125.1;Parent=gene-AD12_RS05795;Dbxref=GenBank:WP_000820125.1;Name=WP_000820125.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709020.1;locus_tag=AD12_RS05795;product=type II secretion system minor pseudopilin GspI;protein_id=WP_000820125.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 8263 8826 . - . ID=gene-AD12_RS05790;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AD12_RS05790;old_locus_tag=AD12_3651 NZ_JJLK01000077.1 Protein Homology CDS 8263 8826 . - 0 ID=cds-WP_001115154.1;Parent=gene-AD12_RS05790;Dbxref=GenBank:WP_001115154.1;Name=WP_001115154.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394829.1;locus_tag=AD12_RS05790;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001115154.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 8830 9285 . - . ID=gene-AD12_RS05785;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD12_RS05785;old_locus_tag=AD12_3652 NZ_JJLK01000077.1 Protein Homology CDS 8830 9285 . - 0 ID=cds-WP_000287130.1;Parent=gene-AD12_RS05785;Dbxref=GenBank:WP_000287130.1;Name=WP_000287130.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912123.1;locus_tag=AD12_RS05785;product=type II secretion system major pseudopilin GspG;protein_id=WP_000287130.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 9302 10525 . - . ID=gene-AD12_RS05780;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AD12_RS05780;old_locus_tag=AD12_3653 NZ_JJLK01000077.1 Protein Homology CDS 9302 10525 . - 0 ID=cds-WP_001173453.1;Parent=gene-AD12_RS05780;Dbxref=GenBank:WP_001173453.1;Name=WP_001173453.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173399.1;locus_tag=AD12_RS05780;product=type II secretion system inner membrane protein GspF;protein_id=WP_001173453.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 10525 12018 . - . ID=gene-AD12_RS05775;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD12_RS05775;old_locus_tag=AD12_3654 NZ_JJLK01000077.1 Protein Homology CDS 10525 12018 . - 0 ID=cds-WP_000249348.1;Parent=gene-AD12_RS05775;Dbxref=GenBank:WP_000249348.1;Name=WP_000249348.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1;locus_tag=AD12_RS05775;product=type II secretion system ATPase GspE;protein_id=WP_000249348.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 12018 14078 . - . ID=gene-AD12_RS05770;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD12_RS05770;old_locus_tag=AD12_3655 NZ_JJLK01000077.1 Protein Homology CDS 12018 14078 . - 0 ID=cds-WP_000498824.1;Parent=gene-AD12_RS05770;Dbxref=GenBank:WP_000498824.1;Name=WP_000498824.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234996.1;locus_tag=AD12_RS05770;product=type II secretion system secretin GspD;protein_id=WP_000498824.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 14108 15067 . - . ID=gene-AD12_RS05765;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AD12_RS05765;old_locus_tag=AD12_3656 NZ_JJLK01000077.1 Protein Homology CDS 14108 15067 . - 0 ID=cds-WP_000135067.1;Parent=gene-AD12_RS05765;Dbxref=GenBank:WP_000135067.1;Name=WP_000135067.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239656.1;locus_tag=AD12_RS05765;product=type II secretion system protein GspC;protein_id=WP_000135067.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 15085 15495 . - . ID=gene-AD12_RS05760;Name=gspS2;gbkey=Gene;gene=gspS2;gene_biotype=protein_coding;locus_tag=AD12_RS05760;old_locus_tag=AD12_3657 NZ_JJLK01000077.1 Protein Homology CDS 15085 15495 . - 0 ID=cds-WP_001324279.1;Parent=gene-AD12_RS05760;Dbxref=GenBank:WP_001324279.1;Name=WP_001324279.1;gbkey=CDS;gene=gspS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417445.1;locus_tag=AD12_RS05760;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_001324279.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 15561 16370 . - . ID=gene-AD12_RS05755;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;locus_tag=AD12_RS05755;old_locus_tag=AD12_3658 NZ_JJLK01000077.1 Protein Homology CDS 15561 16370 . - 0 ID=cds-WP_032286717.1;Parent=gene-AD12_RS05755;Dbxref=GenBank:WP_032286717.1;Name=WP_032286717.1;gbkey=CDS;gene=pppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417446.4;locus_tag=AD12_RS05755;product=prepilin peptidase PppA;protein_id=WP_032286717.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 16518 21083 . - . ID=gene-AD12_RS05750;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;locus_tag=AD12_RS05750;old_locus_tag=AD12_3660 NZ_JJLK01000077.1 Protein Homology CDS 16518 21083 . - 0 ID=cds-WP_001034500.1;Parent=gene-AD12_RS05750;Dbxref=GenBank:WP_001034500.1;Name=WP_001034500.1;gbkey=CDS;gene=sslE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=AD12_RS05750;product=lipoprotein metalloprotease SslE;protein_id=WP_001034500.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 21569 23251 . - . ID=gene-AD12_RS05740;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AD12_RS05740;old_locus_tag=AD12_3663 NZ_JJLK01000077.1 Protein Homology CDS 21569 23251 . - 0 ID=cds-WP_000259303.1;Parent=gene-AD12_RS05740;Dbxref=GenBank:WP_000259303.1;Name=WP_000259303.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AD12_RS05740;product=glycolate permease GlcA;protein_id=WP_000259303.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 23607 25778 . - . ID=gene-AD12_RS05735;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AD12_RS05735;old_locus_tag=AD12_3664 NZ_JJLK01000077.1 Protein Homology CDS 23607 25778 . - 0 ID=cds-WP_032286719.1;Parent=gene-AD12_RS05735;Dbxref=GenBank:WP_032286719.1;Name=WP_032286719.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AD12_RS05735;product=malate synthase G;protein_id=WP_032286719.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 25800 26204 . - . ID=gene-AD12_RS05730;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AD12_RS05730;old_locus_tag=AD12_3665 NZ_JJLK01000077.1 Protein Homology CDS 25800 26204 . - 0 ID=cds-WP_000853256.1;Parent=gene-AD12_RS05730;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AD12_RS05730;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 26209 27432 . - . ID=gene-AD12_RS0125000;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AD12_RS0125000;old_locus_tag=AD12_3666 NZ_JJLK01000077.1 Protein Homology CDS 26209 27432 . - 0 ID=cds-WP_001194666.1;Parent=gene-AD12_RS0125000;Dbxref=GenBank:WP_001194666.1;Name=WP_001194666.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AD12_RS0125000;product=glycolate oxidase subunit GlcF;protein_id=WP_001194666.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 27443 28495 . - . ID=gene-AD12_RS05725;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AD12_RS05725;old_locus_tag=AD12_3667 NZ_JJLK01000077.1 Protein Homology CDS 27443 28495 . - 0 ID=cds-WP_000943057.1;Parent=gene-AD12_RS05725;Dbxref=GenBank:WP_000943057.1;Name=WP_000943057.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439281.1;locus_tag=AD12_RS05725;product=glycolate oxidase subunit GlcE;protein_id=WP_000943057.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 28495 29994 . - . ID=gene-AD12_RS05720;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AD12_RS05720;old_locus_tag=AD12_3668 NZ_JJLK01000077.1 Protein Homology CDS 28495 29994 . - 0 ID=cds-WP_000026117.1;Parent=gene-AD12_RS05720;Dbxref=GenBank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AD12_RS05720;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 30245 31009 . + . ID=gene-AD12_RS05715;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AD12_RS05715;old_locus_tag=AD12_3669 NZ_JJLK01000077.1 Protein Homology CDS 30245 31009 . + 0 ID=cds-WP_001297764.1;Parent=gene-AD12_RS05715;Dbxref=GenBank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AD12_RS05715;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 31016 32158 . - . ID=gene-AD12_RS05710;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AD12_RS05710;old_locus_tag=AD12_3670 NZ_JJLK01000077.1 Protein Homology CDS 31016 32158 . - 0 ID=cds-WP_001324274.1;Parent=gene-AD12_RS05710;Dbxref=GenBank:WP_001324274.1;Name=WP_001324274.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=AD12_RS05710;product=protein YghO;protein_id=WP_001324274.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 32562 34250 . + . ID=gene-AD12_RS05705;Name=AD12_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05705;old_locus_tag=AD12_3671 NZ_JJLK01000077.1 Protein Homology CDS 32562 34250 . + 0 ID=cds-WP_032286742.1;Parent=gene-AD12_RS05705;Dbxref=GenBank:WP_032286742.1;Name=WP_032286742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383581.1;locus_tag=AD12_RS05705;product=fatty acyl-AMP ligase;protein_id=WP_032286742.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 34247 35161 . + . ID=gene-AD12_RS05700;Name=AD12_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05700;old_locus_tag=AD12_3672 NZ_JJLK01000077.1 Protein Homology CDS 34247 35161 . + 0 ID=cds-WP_001077198.1;Parent=gene-AD12_RS05700;Dbxref=GenBank:WP_001077198.1;Name=WP_001077198.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AD12_RS05700;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001077198.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 35193 35441 . + . ID=gene-AD12_RS05695;Name=AD12_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05695;old_locus_tag=AD12_3673 NZ_JJLK01000077.1 Protein Homology CDS 35193 35441 . + 0 ID=cds-WP_000248097.1;Parent=gene-AD12_RS05695;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AD12_RS05695;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 35441 36613 . + . ID=gene-AD12_RS05690;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=AD12_RS05690;old_locus_tag=AD12_3674 NZ_JJLK01000077.1 Protein Homology CDS 35441 36613 . + 0 ID=cds-WP_000524972.1;Parent=gene-AD12_RS05690;Dbxref=GenBank:WP_000524972.1;Name=WP_000524972.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AD12_RS05690;product=serine palmitoyltransferase;protein_id=WP_000524972.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 36649 37728 . - . ID=gene-AD12_RS05685;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AD12_RS05685;old_locus_tag=AD12_3675 NZ_JJLK01000077.1 Protein Homology CDS 36649 37728 . - 0 ID=cds-WP_001299429.1;Parent=gene-AD12_RS05685;Dbxref=GenBank:WP_001299429.1;Name=WP_001299429.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AD12_RS05685;product=LPS export ABC transporter permease LptG;protein_id=WP_001299429.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 37725 38795 . - . ID=gene-AD12_RS05680;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AD12_RS05680;old_locus_tag=AD12_3676 NZ_JJLK01000077.1 Protein Homology CDS 37725 38795 . - 0 ID=cds-WP_000779652.1;Parent=gene-AD12_RS05680;Dbxref=GenBank:WP_000779652.1;Name=WP_000779652.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AD12_RS05680;product=LPS export ABC transporter permease LptF;protein_id=WP_000779652.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 38826 39386 . - . ID=gene-AD12_RS05675;Name=AD12_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05675;old_locus_tag=AD12_3677 NZ_JJLK01000077.1 Protein Homology CDS 38826 39386 . - 0 ID=cds-WP_001298770.1;Parent=gene-AD12_RS05675;Dbxref=GenBank:WP_001298770.1;Name=WP_001298770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AD12_RS05675;product=YtfJ family protein;protein_id=WP_001298770.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 39398 40222 . - . ID=gene-AD12_RS05670;Name=AD12_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05670;old_locus_tag=AD12_3678 NZ_JJLK01000077.1 Protein Homology CDS 39398 40222 . - 0 ID=cds-WP_000984977.1;Parent=gene-AD12_RS05670;Dbxref=GenBank:WP_000984977.1;Name=WP_000984977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AD12_RS05670;product=hypothetical protein;protein_id=WP_000984977.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 40222 41571 . - . ID=gene-AD12_RS05665;Name=AD12_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05665;old_locus_tag=AD12_3679 NZ_JJLK01000077.1 Protein Homology CDS 40222 41571 . - 0 ID=cds-WP_000896853.1;Parent=gene-AD12_RS05665;Dbxref=GenBank:WP_000896853.1;Name=WP_000896853.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AD12_RS05665;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000896853.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 41617 42375 . - . ID=gene-AD12_RS05660;Name=AD12_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05660;old_locus_tag=AD12_3680 NZ_JJLK01000077.1 Protein Homology CDS 41617 42375 . - 0 ID=cds-WP_000339512.1;Parent=gene-AD12_RS05660;Dbxref=GenBank:WP_000339512.1;Name=WP_000339512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AD12_RS05660;product=hypothetical protein;protein_id=WP_000339512.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 42407 43120 . - . ID=gene-AD12_RS05655;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=AD12_RS05655;old_locus_tag=AD12_3681 NZ_JJLK01000077.1 Protein Homology CDS 42407 43120 . - 0 ID=cds-WP_001076218.1;Parent=gene-AD12_RS05655;Dbxref=GenBank:WP_001076218.1;Name=WP_001076218.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AD12_RS05655;product=dTMP kinase;protein_id=WP_001076218.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 43294 43986 . + . ID=gene-AD12_RS05650;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=AD12_RS05650;old_locus_tag=AD12_3682 NZ_JJLK01000077.1 Protein Homology CDS 43294 43986 . + 0 ID=cds-WP_001190781.1;Parent=gene-AD12_RS05650;Dbxref=GenBank:WP_001190781.1;Name=WP_001190781.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghT;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AD12_RS05650;product=dTMP kinase;protein_id=WP_001190781.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 44035 45534 . - . ID=gene-AD12_RS05645;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AD12_RS05645;old_locus_tag=AD12_3683 NZ_JJLK01000077.1 Protein Homology CDS 44035 45534 . - 0 ID=cds-WP_032286721.1;Parent=gene-AD12_RS05645;Dbxref=GenBank:WP_032286721.1;Name=WP_032286721.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AD12_RS05645;product=inorganic phosphate transporter PitB;protein_id=WP_032286721.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 45826 47685 . - . ID=gene-AD12_RS05640;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AD12_RS05640;old_locus_tag=AD12_3685 NZ_JJLK01000077.1 Protein Homology CDS 45826 47685 . - 0 ID=cds-WP_001356239.1;Parent=gene-AD12_RS05640;Dbxref=GenBank:WP_001356239.1;Name=WP_001356239.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AD12_RS05640;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001356239.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 47890 48756 . + . ID=gene-AD12_RS05635;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AD12_RS05635;old_locus_tag=AD12_3686 NZ_JJLK01000077.1 Protein Homology CDS 47890 48756 . + 0 ID=cds-WP_001295515.1;Parent=gene-AD12_RS05635;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AD12_RS05635;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 48879 49127 . - . ID=gene-AD12_RS05630;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AD12_RS05630;old_locus_tag=AD12_3687 NZ_JJLK01000077.1 Protein Homology CDS 48879 49127 . - 0 ID=cds-WP_000334896.1;Parent=gene-AD12_RS05630;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AD12_RS05630;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 49140 49481 . - . ID=gene-AD12_RS05625;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD12_RS05625;old_locus_tag=AD12_3688 NZ_JJLK01000077.1 Protein Homology CDS 49140 49481 . - 0 ID=cds-WP_000544953.1;Parent=gene-AD12_RS05625;Dbxref=GenBank:WP_000544953.1;Name=WP_000544953.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AD12_RS05625;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 49474 49962 . - . ID=gene-AD12_RS05620;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AD12_RS05620;old_locus_tag=AD12_3689 NZ_JJLK01000077.1 Protein Homology CDS 49474 49962 . - 0 ID=cds-WP_000134014.1;Parent=gene-AD12_RS05620;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AD12_RS05620;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 49955 50449 . - . ID=gene-AD12_RS05615;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AD12_RS05615;old_locus_tag=AD12_3690 NZ_JJLK01000077.1 Protein Homology CDS 49955 50449 . - 0 ID=cds-WP_001221953.1;Parent=gene-AD12_RS05615;Dbxref=GenBank:WP_001221953.1;Name=WP_001221953.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311905.1;locus_tag=AD12_RS05615;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221953.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 50449 52152 . - . ID=gene-AD12_RS05610;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AD12_RS05610;old_locus_tag=AD12_3691 NZ_JJLK01000077.1 Protein Homology CDS 50449 52152 . - 0 ID=cds-WP_000083065.1;Parent=gene-AD12_RS05610;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AD12_RS05610;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 52149 53327 . - . ID=gene-AD12_RS05605;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AD12_RS05605;old_locus_tag=AD12_3692 NZ_JJLK01000077.1 Protein Homology CDS 52149 53327 . - 0 ID=cds-WP_000017703.1;Parent=gene-AD12_RS05605;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AD12_RS05605;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 53317 54303 . - . ID=gene-AD12_RS05600;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AD12_RS05600;old_locus_tag=AD12_3693 NZ_JJLK01000077.1 Protein Homology CDS 53317 54303 . - 0 ID=cds-WP_001081870.1;Parent=gene-AD12_RS05600;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AD12_RS05600;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 54306 55424 . - . ID=gene-AD12_RS05595;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AD12_RS05595;old_locus_tag=AD12_3694 NZ_JJLK01000077.1 Protein Homology CDS 54306 55424 . - 0 ID=cds-WP_000145410.1;Parent=gene-AD12_RS05595;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AD12_RS05595;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 55613 55900 . - . ID=gene-AD12_RS05590;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AD12_RS05590;old_locus_tag=AD12_3696 NZ_JJLK01000077.1 Protein Homology CDS 55613 55900 . - 0 ID=cds-WP_001059136.1;Parent=gene-AD12_RS05590;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AD12_RS05590;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 56019 56906 . - . ID=gene-AD12_RS05585;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=AD12_RS05585;old_locus_tag=AD12_3697 NZ_JJLK01000077.1 Protein Homology CDS 56019 56906 . - 0 ID=cds-WP_001297303.1;Parent=gene-AD12_RS05585;Dbxref=GenBank:WP_001297303.1;Name=WP_001297303.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AD12_RS05585;product=YghX family hydrolase;protein_id=WP_001297303.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 57063 58103 . + . ID=gene-AD12_RS05580;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AD12_RS05580;old_locus_tag=AD12_3698 NZ_JJLK01000077.1 Protein Homology CDS 57063 58103 . + 0 ID=cds-WP_000262154.1;Parent=gene-AD12_RS05580;Dbxref=GenBank:WP_000262154.1;Name=WP_000262154.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708818.1;locus_tag=AD12_RS05580;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262154.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 58143 58637 . - . ID=gene-AD12_RS05575;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AD12_RS05575;old_locus_tag=AD12_3699 NZ_JJLK01000077.1 Protein Homology CDS 58143 58637 . - 0 ID=cds-WP_000439331.1;Parent=gene-AD12_RS05575;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AD12_RS05575;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 58828 59712 . + . ID=gene-AD12_RS05570;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AD12_RS05570;old_locus_tag=AD12_3700 NZ_JJLK01000077.1 Protein Homology CDS 58828 59712 . + 0 ID=cds-WP_000018760.1;Parent=gene-AD12_RS05570;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AD12_RS05570;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 59984 60409 . - . ID=gene-AD12_RS05565;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AD12_RS05565;old_locus_tag=AD12_3701 NZ_JJLK01000077.1 Protein Homology CDS 59984 60409 . - 0 ID=cds-WP_001240712.1;Parent=gene-AD12_RS05565;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AD12_RS05565;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 60416 61150 . - . ID=gene-AD12_RS05560;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AD12_RS05560;old_locus_tag=AD12_3702 NZ_JJLK01000077.1 Protein Homology CDS 60416 61150 . - 0 ID=cds-WP_000527844.1;Parent=gene-AD12_RS05560;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AD12_RS05560;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 61402 62589 . + . ID=gene-AD12_RS05555;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AD12_RS05555;old_locus_tag=AD12_3703 NZ_JJLK01000077.1 Protein Homology CDS 61402 62589 . + 0 ID=cds-WP_001320425.1;Parent=gene-AD12_RS05555;Dbxref=GenBank:WP_001320425.1;Name=WP_001320425.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311919.1;locus_tag=AD12_RS05555;product=cystathionine beta-lyase;protein_id=WP_001320425.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 62729 63388 . + . ID=gene-AD12_RS05550;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AD12_RS05550;old_locus_tag=AD12_3704 NZ_JJLK01000077.1 Protein Homology CDS 62729 63388 . + 0 ID=cds-WP_000268419.1;Parent=gene-AD12_RS05550;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AD12_RS05550;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 63428 64327 . - . ID=gene-AD12_RS05545;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AD12_RS05545;old_locus_tag=AD12_3705 NZ_JJLK01000077.1 Protein Homology CDS 63428 64327 . - 0 ID=cds-WP_032286724.1;Parent=gene-AD12_RS05545;Dbxref=GenBank:WP_032286724.1;Name=WP_032286724.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AD12_RS05545;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_032286724.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 64521 65684 . + . ID=gene-AD12_RS05540;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AD12_RS05540;old_locus_tag=AD12_3706 NZ_JJLK01000077.1 Protein Homology CDS 64521 65684 . + 0 ID=cds-WP_001058813.1;Parent=gene-AD12_RS05540;Dbxref=GenBank:WP_001058813.1;Name=WP_001058813.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AD12_RS05540;product=alcohol dehydrogenase;protein_id=WP_001058813.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 65789 66616 . + . ID=gene-AD12_RS05535;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AD12_RS05535;old_locus_tag=AD12_3707 NZ_JJLK01000077.1 Protein Homology CDS 65789 66616 . + 0 ID=cds-WP_000013149.1;Parent=gene-AD12_RS05535;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AD12_RS05535;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 66816 67742 . + . ID=gene-AD12_RS05530;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AD12_RS05530;old_locus_tag=AD12_3708 NZ_JJLK01000077.1 Protein Homology CDS 66816 67742 . + 0 ID=cds-WP_000691598.1;Parent=gene-AD12_RS05530;Dbxref=GenBank:WP_000691598.1;Name=WP_000691598.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AD12_RS05530;product=YbjP/YqhG family protein;protein_id=WP_000691598.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 67793 68050 . + . ID=gene-AD12_RS05525;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AD12_RS05525;old_locus_tag=AD12_3709 NZ_JJLK01000077.1 Protein Homology CDS 67793 68050 . + 0 ID=cds-WP_000848528.1;Parent=gene-AD12_RS05525;Dbxref=GenBank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AD12_RS05525;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 68093 70312 . - . ID=gene-AD12_RS05520;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AD12_RS05520;old_locus_tag=AD12_3710 NZ_JJLK01000077.1 Protein Homology CDS 68093 70312 . - 0 ID=cds-WP_000095187.1;Parent=gene-AD12_RS05520;Dbxref=GenBank:WP_000095187.1;Name=WP_000095187.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AD12_RS05520;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 70423 71835 . - . ID=gene-AD12_RS05515;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AD12_RS05515;old_locus_tag=AD12_3711 NZ_JJLK01000077.1 Protein Homology CDS 70423 71835 . - 0 ID=cds-WP_000059395.1;Parent=gene-AD12_RS05515;Dbxref=GenBank:WP_000059395.1;Name=WP_000059395.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311928.1;locus_tag=AD12_RS05515;product=cell division protein FtsP;protein_id=WP_000059395.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 71910 72647 . - . ID=gene-AD12_RS05510;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AD12_RS05510;old_locus_tag=AD12_3712 NZ_JJLK01000077.1 Protein Homology CDS 71910 72647 . - 0 ID=cds-WP_000965717.1;Parent=gene-AD12_RS05510;Dbxref=GenBank:WP_000965717.1;Name=WP_000965717.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=AD12_RS05510;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965717.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 72881 75139 . - . ID=gene-AD12_RS05505;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AD12_RS05505;old_locus_tag=AD12_3713 NZ_JJLK01000077.1 Protein Homology CDS 72881 75139 . - 0 ID=cds-WP_001461577.1;Parent=gene-AD12_RS05505;Dbxref=GenBank:WP_001461577.1;Name=WP_001461577.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AD12_RS05505;product=DNA topoisomerase IV subunit A;protein_id=WP_001461577.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 75277 76884 . - . ID=gene-AD12_RS05500;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;locus_tag=AD12_RS05500;old_locus_tag=AD12_3714 NZ_JJLK01000077.1 Protein Homology CDS 75277 76884 . - 0 ID=cds-WP_001324265.1;Parent=gene-AD12_RS05500;Dbxref=GenBank:WP_001324265.1;Name=WP_001324265.1;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AD12_RS05500;product=ABC transporter substrate-binding protein;protein_id=WP_001324265.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 77017 77412 . - . ID=gene-AD12_RS05495;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AD12_RS05495;old_locus_tag=AD12_3715 NZ_JJLK01000077.1 Protein Homology CDS 77017 77412 . - 0 ID=cds-WP_000650107.1;Parent=gene-AD12_RS05495;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AD12_RS05495;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 77414 77710 . - . ID=gene-AD12_RS0125020;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AD12_RS0125020 NZ_JJLK01000077.1 Protein Homology CDS 77414 77710 . - 0 ID=cds-WP_000415584.1;Parent=gene-AD12_RS0125020;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AD12_RS0125020;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 77915 78397 . - . ID=gene-AD12_RS05490;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AD12_RS05490;old_locus_tag=AD12_3716 NZ_JJLK01000077.1 Protein Homology CDS 77915 78397 . - 0 ID=cds-WP_000183494.1;Parent=gene-AD12_RS05490;Dbxref=GenBank:WP_000183494.1;Name=WP_000183494.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708835.1;locus_tag=AD12_RS05490;product=AraC family transcriptional regulator;protein_id=WP_000183494.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 78450 78842 . - . ID=gene-AD12_RS05485;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AD12_RS05485;old_locus_tag=AD12_3717 NZ_JJLK01000077.1 Protein Homology CDS 78450 78842 . - 0 ID=cds-WP_000712658.1;Parent=gene-AD12_RS05485;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AD12_RS05485;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 78994 79653 . + . ID=gene-AD12_RS05480;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AD12_RS05480;old_locus_tag=AD12_3718 NZ_JJLK01000077.1 Protein Homology CDS 78994 79653 . + 0 ID=cds-WP_001221491.1;Parent=gene-AD12_RS05480;Dbxref=GenBank:WP_001221491.1;Name=WP_001221491.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AD12_RS05480;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221491.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 79650 80999 . + . ID=gene-AD12_RS05475;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AD12_RS05475;old_locus_tag=AD12_3719 NZ_JJLK01000077.1 Protein Homology CDS 79650 80999 . + 0 ID=cds-WP_000673406.1;Parent=gene-AD12_RS05475;Dbxref=GenBank:WP_000673406.1;Name=WP_000673406.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AD12_RS05475;product=quorum sensing histidine kinase QseC;protein_id=WP_000673406.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 81109 81690 . + . ID=gene-AD12_RS05470;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AD12_RS05470;old_locus_tag=AD12_3720 NZ_JJLK01000077.1 Protein Homology CDS 81109 81690 . + 0 ID=cds-WP_000065430.1;Parent=gene-AD12_RS05470;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AD12_RS05470;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 81721 82035 . + . ID=gene-AD12_RS05465;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AD12_RS05465;old_locus_tag=AD12_3721 NZ_JJLK01000077.1 Protein Homology CDS 81721 82035 . + 0 ID=cds-WP_000958598.1;Parent=gene-AD12_RS05465;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AD12_RS05465;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 82079 83410 . - . ID=gene-AD12_RS05460;Name=AD12_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05460;old_locus_tag=AD12_3722 NZ_JJLK01000077.1 Protein Homology CDS 82079 83410 . - 0 ID=cds-WP_000778883.1;Parent=gene-AD12_RS05460;Dbxref=GenBank:WP_000778883.1;Name=WP_000778883.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778885.1;locus_tag=AD12_RS05460;product=MFS transporter;protein_id=WP_000778883.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 83697 84449 . + . ID=gene-AD12_RS05455;Name=AD12_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05455;old_locus_tag=AD12_3724 NZ_JJLK01000077.1 Protein Homology CDS 83697 84449 . + 0 ID=cds-WP_000619462.1;Parent=gene-AD12_RS05455;Dbxref=GenBank:WP_000619462.1;Name=WP_000619462.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591154.1;locus_tag=AD12_RS05455;product=GntR family transcriptional regulator;protein_id=WP_000619462.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 84463 85539 . + . ID=gene-AD12_RS05450;Name=AD12_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05450;old_locus_tag=AD12_3725 NZ_JJLK01000077.1 Protein Homology CDS 84463 85539 . + 0 ID=cds-WP_032286727.1;Parent=gene-AD12_RS05450;Dbxref=GenBank:WP_032286727.1;Name=WP_032286727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033125.1;locus_tag=AD12_RS05450;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_032286727.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 85539 86537 . + . ID=gene-AD12_RS05445;Name=AD12_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05445;old_locus_tag=AD12_3726 NZ_JJLK01000077.1 Protein Homology CDS 85539 86537 . + 0 ID=cds-WP_001356238.1;Parent=gene-AD12_RS05445;Dbxref=GenBank:WP_001356238.1;Name=WP_001356238.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774999.1;locus_tag=AD12_RS05445;product=SIS domain-containing protein;protein_id=WP_001356238.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 86542 87456 . + . ID=gene-AD12_RS05440;Name=AD12_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05440;old_locus_tag=AD12_3727 NZ_JJLK01000077.1 Protein Homology CDS 86542 87456 . + 0 ID=cds-WP_000712976.1;Parent=gene-AD12_RS05440;Dbxref=GenBank:WP_000712976.1;Name=WP_000712976.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0016301,GO:0016773,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712975.1;locus_tag=AD12_RS05440;product=carbohydrate kinase family protein;protein_id=WP_000712976.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 87484 88608 . + . ID=gene-AD12_RS05435;Name=AD12_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05435;old_locus_tag=AD12_3728 NZ_JJLK01000077.1 Protein Homology CDS 87484 88608 . + 0 ID=cds-WP_000702795.1;Parent=gene-AD12_RS05435;Dbxref=GenBank:WP_000702795.1;Name=WP_000702795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702796.1;locus_tag=AD12_RS05435;product=esterase-like activity of phytase family protein;protein_id=WP_000702795.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 88704 89438 . + . ID=gene-AD12_RS05430;Name=AD12_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05430;old_locus_tag=AD12_3729 NZ_JJLK01000077.1 Protein Homology CDS 88704 89438 . + 0 ID=cds-WP_249403668.1;Parent=gene-AD12_RS05430;Dbxref=GenBank:WP_249403668.1;Name=WP_249403668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317336.1;locus_tag=AD12_RS05430;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_249403668.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 89452 90321 . + . ID=gene-AD12_RS05425;Name=AD12_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05425;old_locus_tag=AD12_3730 NZ_JJLK01000077.1 Protein Homology CDS 89452 90321 . + 0 ID=cds-WP_001060172.1;Parent=gene-AD12_RS05425;Dbxref=GenBank:WP_001060172.1;Name=WP_001060172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060172.1;locus_tag=AD12_RS05425;product=DUF2608 domain-containing protein;protein_id=WP_001060172.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 90366 92258 . - . ID=gene-AD12_RS05420;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AD12_RS05420;old_locus_tag=AD12_3731 NZ_JJLK01000077.1 Protein Homology CDS 90366 92258 . - 0 ID=cds-WP_000195296.1;Parent=gene-AD12_RS05420;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AD12_RS05420;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 92287 92868 . - . ID=gene-AD12_RS05415;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AD12_RS05415;old_locus_tag=AD12_3732 NZ_JJLK01000077.1 Protein Homology CDS 92287 92868 . - 0 ID=cds-WP_000105733.1;Parent=gene-AD12_RS05415;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AD12_RS05415;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 92868 93695 . - . ID=gene-AD12_RS05410;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AD12_RS05410;old_locus_tag=AD12_3733 NZ_JJLK01000077.1 Protein Homology CDS 92868 93695 . - 0 ID=cds-WP_000444747.1;Parent=gene-AD12_RS05410;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AD12_RS05410;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 93720 94142 . - . ID=gene-AD12_RS05405;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AD12_RS05405;old_locus_tag=AD12_3734 NZ_JJLK01000077.1 Protein Homology CDS 93720 94142 . - 0 ID=cds-WP_000833393.1;Parent=gene-AD12_RS05405;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AD12_RS05405;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 94143 94772 . - . ID=gene-AD12_RS05400;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AD12_RS05400;old_locus_tag=AD12_3735 NZ_JJLK01000077.1 Protein Homology CDS 94143 94772 . - 0 ID=cds-WP_032260246.1;Parent=gene-AD12_RS05400;Dbxref=GenBank:WP_032260246.1;Name=WP_032260246.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AD12_RS05400;product=ADP-ribose diphosphatase;protein_id=WP_032260246.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 94977 96458 . + . ID=gene-AD12_RS05395;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AD12_RS05395;old_locus_tag=AD12_3736 NZ_JJLK01000077.1 Protein Homology CDS 94977 96458 . + 0 ID=cds-WP_000735278.1;Parent=gene-AD12_RS05395;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AD12_RS05395;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 96606 97277 . + . ID=gene-AD12_RS05390;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AD12_RS05390;old_locus_tag=AD12_3737 NZ_JJLK01000077.1 Protein Homology CDS 96606 97277 . + 0 ID=cds-WP_000831543.1;Parent=gene-AD12_RS05390;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AD12_RS05390;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 97283 98443 . + . ID=gene-AD12_RS05385;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AD12_RS05385;old_locus_tag=AD12_3738 NZ_JJLK01000077.1 Protein Homology CDS 97283 98443 . + 0 ID=cds-WP_000442860.1;Parent=gene-AD12_RS05385;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AD12_RS05385;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 98481 99269 . - . ID=gene-AD12_RS05380;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AD12_RS05380;old_locus_tag=AD12_3739 NZ_JJLK01000077.1 Protein Homology CDS 98481 99269 . - 0 ID=cds-WP_032286729.1;Parent=gene-AD12_RS05380;Dbxref=GenBank:WP_032286729.1;Name=WP_032286729.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AD12_RS05380;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_032286729.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 99412 100185 . + . ID=gene-AD12_RS05375;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AD12_RS05375;old_locus_tag=AD12_3740 NZ_JJLK01000077.1 Protein Homology CDS 99412 100185 . + 0 ID=cds-WP_001295627.1;Parent=gene-AD12_RS05375;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AD12_RS05375;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 100243 100413 . - . ID=gene-AD12_RS29140;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AD12_RS29140;old_locus_tag=AD12_3741 NZ_JJLK01000077.1 Protein Homology CDS 100243 100413 . - 0 ID=cds-WP_000469266.1;Parent=gene-AD12_RS29140;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AD12_RS29140;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 100674 101327 . - . ID=gene-AD12_RS05365;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AD12_RS05365;old_locus_tag=AD12_3742 NZ_JJLK01000077.1 Protein Homology CDS 100674 101327 . - 0 ID=cds-WP_001363923.1;Parent=gene-AD12_RS05365;Dbxref=GenBank:WP_001363923.1;Name=WP_001363923.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AD12_RS05365;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001363923.1;transl_table=11 NZ_JJLK01000077.1 cmsearch riboswitch 101431 101579 . - . ID=id-NZ_JJLK01000077.1:101431..101579;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000077.1 RefSeq gene 101701 101991 . + . ID=gene-AD12_RS05360;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AD12_RS05360;old_locus_tag=AD12_3743 NZ_JJLK01000077.1 Protein Homology CDS 101701 101991 . + 0 ID=cds-WP_001297598.1;Parent=gene-AD12_RS05360;Dbxref=GenBank:WP_001297598.1;Name=WP_001297598.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AD12_RS05360;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001297598.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 102274 102825 . + . ID=gene-AD12_RS05355;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=AD12_RS05355;old_locus_tag=AD12_3744 NZ_JJLK01000077.1 Protein Homology CDS 102274 102825 . + 0 ID=cds-WP_001272149.1;Parent=gene-AD12_RS05355;Dbxref=GenBank:WP_001272149.1;Name=WP_001272149.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AD12_RS05355;product=fimbrial-like protein;protein_id=WP_001272149.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 102885 105389 . + . ID=gene-AD12_RS05350;Name=AD12_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05350;old_locus_tag=AD12_3745 NZ_JJLK01000077.1 Protein Homology CDS 102885 105389 . + 0 ID=cds-WP_000277119.1;Parent=gene-AD12_RS05350;Dbxref=GenBank:WP_000277119.1;Name=WP_000277119.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AD12_RS05350;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000277119.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 105405 106154 . + . ID=gene-AD12_RS05345;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AD12_RS05345;old_locus_tag=AD12_3746 NZ_JJLK01000077.1 Protein Homology CDS 105405 106154 . + 0 ID=cds-WP_001269825.1;Parent=gene-AD12_RS05345;Dbxref=GenBank:WP_001269825.1;Name=WP_001269825.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AD12_RS05345;product=fimbrial biogenesis chaperone;protein_id=WP_001269825.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 106156 107220 . + . ID=gene-AD12_RS05340;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=AD12_RS05340;old_locus_tag=AD12_3747 NZ_JJLK01000077.1 Protein Homology CDS 106156 107220 . + 0 ID=cds-WP_001269797.1;Parent=gene-AD12_RS05340;Dbxref=GenBank:WP_001269797.1;Name=WP_001269797.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AD12_RS05340;product=fimbrial protein;protein_id=WP_001269797.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 107263 107463 . - . ID=gene-AD12_RS05335;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AD12_RS05335;old_locus_tag=AD12_3748 NZ_JJLK01000077.1 Protein Homology CDS 107263 107463 . - 0 ID=cds-WP_000350095.1;Parent=gene-AD12_RS05335;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AD12_RS05335;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 107732 108361 . + . ID=gene-AD12_RS05330;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AD12_RS05330;old_locus_tag=AD12_3749 NZ_JJLK01000077.1 Protein Homology CDS 107732 108361 . + 0 ID=cds-WP_000599947.1;Parent=gene-AD12_RS05330;Dbxref=GenBank:WP_000599947.1;Name=WP_000599947.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AD12_RS05330;product=OB-fold-containig protein;protein_id=WP_000599947.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 108388 110049 . + . ID=gene-AD12_RS05325;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AD12_RS05325;old_locus_tag=AD12_3750 NZ_JJLK01000077.1 Protein Homology CDS 108388 110049 . + 0 ID=cds-WP_000341046.1;Parent=gene-AD12_RS05325;Dbxref=GenBank:WP_000341046.1;Name=WP_000341046.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AD12_RS05325;product=flotillin family protein;protein_id=WP_000341046.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 110288 110347 . + . ID=gene-AD12_RS28880;Name=AD12_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28880 NZ_JJLK01000077.1 Protein Homology CDS 110288 110347 . + 0 ID=cds-WP_100249846.1;Parent=gene-AD12_RS28880;Dbxref=GenBank:WP_100249846.1;Name=WP_100249846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AD12_RS28880;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_100249846.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 110664 110723 . + . ID=gene-AD12_RS28885;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AD12_RS28885 NZ_JJLK01000077.1 Protein Homology CDS 110664 110723 . + 0 ID=cds-WP_001387082.1;Parent=gene-AD12_RS28885;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AD12_RS28885;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 110843 112276 . - . ID=gene-AD12_RS05320;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AD12_RS05320;old_locus_tag=AD12_3751 NZ_JJLK01000077.1 Protein Homology CDS 110843 112276 . - 0 ID=cds-WP_000869178.1;Parent=gene-AD12_RS05320;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AD12_RS05320;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 112324 115164 . - . ID=gene-AD12_RS05315;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AD12_RS05315;old_locus_tag=AD12_3752 NZ_JJLK01000077.1 Protein Homology CDS 112324 115164 . - 0 ID=cds-WP_001324258.1;Parent=gene-AD12_RS05315;Dbxref=GenBank:WP_001324258.1;Name=WP_001324258.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AD12_RS05315;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001324258.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 115187 116488 . - . ID=gene-AD12_RS05310;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AD12_RS05310;old_locus_tag=AD12_3753 NZ_JJLK01000077.1 Protein Homology CDS 115187 116488 . - 0 ID=cds-WP_000046281.1;Parent=gene-AD12_RS05310;Dbxref=GenBank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AD12_RS05310;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 116730 117350 . + . ID=gene-AD12_RS05305;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AD12_RS05305;old_locus_tag=AD12_3754 NZ_JJLK01000077.1 Protein Homology CDS 116730 117350 . + 0 ID=cds-WP_001125331.1;Parent=gene-AD12_RS05305;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AD12_RS05305;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 117414 118652 . + . ID=gene-AD12_RS05300;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AD12_RS05300;old_locus_tag=AD12_3755 NZ_JJLK01000077.1 Protein Homology CDS 117414 118652 . + 0 ID=cds-WP_000708487.1;Parent=gene-AD12_RS05300;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AD12_RS05300;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 118833 119654 . - . ID=gene-AD12_RS05295;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AD12_RS05295;old_locus_tag=AD12_3756 NZ_JJLK01000077.1 Protein Homology CDS 118833 119654 . - 0 ID=cds-WP_001510396.1;Parent=gene-AD12_RS05295;Dbxref=GenBank:WP_001510396.1;Name=WP_001510396.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AD12_RS05295;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001510396.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 119744 120112 . - . ID=gene-AD12_RS05290;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AD12_RS05290;old_locus_tag=AD12_3757 NZ_JJLK01000077.1 Protein Homology CDS 119744 120112 . - 0 ID=cds-WP_001295541.1;Parent=gene-AD12_RS05290;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AD12_RS05290;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 120217 120834 . + . ID=gene-AD12_RS05285;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AD12_RS05285;old_locus_tag=AD12_3758 NZ_JJLK01000077.1 Protein Homology CDS 120217 120834 . + 0 ID=cds-WP_001272796.1;Parent=gene-AD12_RS05285;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AD12_RS05285;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 120847 121779 . - . ID=gene-AD12_RS05280;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AD12_RS05280;old_locus_tag=AD12_3759 NZ_JJLK01000077.1 Protein Homology CDS 120847 121779 . - 0 ID=cds-WP_032286731.1;Parent=gene-AD12_RS05280;Dbxref=GenBank:WP_032286731.1;Name=WP_032286731.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AD12_RS05280;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_032286731.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 121986 122897 . + . ID=gene-AD12_RS05275;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AD12_RS05275;old_locus_tag=AD12_3761 NZ_JJLK01000077.1 Protein Homology CDS 121986 122897 . + 0 ID=cds-WP_000986797.1;Parent=gene-AD12_RS05275;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AD12_RS05275;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 122894 123499 . + . ID=gene-AD12_RS05270;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AD12_RS05270;old_locus_tag=AD12_3762 NZ_JJLK01000077.1 Protein Homology CDS 122894 123499 . + 0 ID=cds-WP_000722957.1;Parent=gene-AD12_RS05270;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AD12_RS05270;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 123547 125010 . + . ID=gene-AD12_RS05265;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AD12_RS05265;old_locus_tag=AD12_3763 NZ_JJLK01000077.1 Protein Homology CDS 123547 125010 . + 0 ID=cds-WP_000804973.1;Parent=gene-AD12_RS05265;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AD12_RS05265;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 125053 126066 . - . ID=gene-AD12_RS05260;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AD12_RS05260;old_locus_tag=AD12_3764 NZ_JJLK01000077.1 Protein Homology CDS 125053 126066 . - 0 ID=cds-WP_032181781.1;Parent=gene-AD12_RS05260;Dbxref=GenBank:WP_032181781.1;Name=WP_032181781.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AD12_RS05260;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_032181781.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 126304 126519 . + . ID=gene-AD12_RS05255;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AD12_RS05255;old_locus_tag=AD12_3765 NZ_JJLK01000077.1 Protein Homology CDS 126304 126519 . + 0 ID=cds-WP_001144069.1;Parent=gene-AD12_RS05255;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AD12_RS05255;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 126630 128375 . + . ID=gene-AD12_RS05250;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AD12_RS05250;old_locus_tag=AD12_3766 NZ_JJLK01000077.1 Protein Homology CDS 126630 128375 . + 0 ID=cds-WP_000918827.1;Parent=gene-AD12_RS05250;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AD12_RS05250;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 128570 130411 . + . ID=gene-AD12_RS05245;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AD12_RS05245;old_locus_tag=AD12_3768 NZ_JJLK01000077.1 Protein Homology CDS 128570 130411 . + 0 ID=cds-WP_001654606.1;Parent=gene-AD12_RS05245;Dbxref=GenBank:WP_001654606.1;Name=WP_001654606.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AD12_RS05245;product=RNA polymerase sigma factor RpoD;protein_id=WP_001654606.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 130490 130996 . - . ID=gene-AD12_RS05240;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AD12_RS05240;old_locus_tag=AD12_3769 NZ_JJLK01000077.1 Protein Homology CDS 130490 130996 . - 0 ID=cds-WP_000228937.1;Parent=gene-AD12_RS05240;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AD12_RS05240;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 131121 131196 . + . ID=gene-AD12_RS05235;Name=AD12_RS05235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS05235;old_locus_tag=AD12_3770 NZ_JJLK01000077.1 tRNAscan-SE tRNA 131121 131196 . + . ID=rna-AD12_RS05235;Parent=gene-AD12_RS05235;anticodon=(pos:131154..131156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS05235;product=tRNA-Ile NZ_JJLK01000077.1 tRNAscan-SE exon 131121 131196 . + . ID=exon-AD12_RS05235-1;Parent=rna-AD12_RS05235;anticodon=(pos:131154..131156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS05235;product=tRNA-Ile NZ_JJLK01000077.1 RefSeq gene 131250 132014 . - . ID=gene-AD12_RS05230;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AD12_RS05230;old_locus_tag=AD12_3771 NZ_JJLK01000077.1 Protein Homology CDS 131250 132014 . - 0 ID=cds-WP_001065905.1;Parent=gene-AD12_RS05230;Dbxref=GenBank:WP_001065905.1;Name=WP_001065905.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311979.1;locus_tag=AD12_RS05230;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001065905.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 132302 132925 . + . ID=gene-AD12_RS05225;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AD12_RS05225;old_locus_tag=AD12_3772 NZ_JJLK01000077.1 Protein Homology CDS 132302 132925 . + 0 ID=cds-WP_000018005.1;Parent=gene-AD12_RS05225;Dbxref=GenBank:WP_000018005.1;Name=WP_000018005.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311980.1;locus_tag=AD12_RS05225;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018005.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 133080 134600 . - . ID=gene-AD12_RS05220;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AD12_RS05220;old_locus_tag=AD12_3773 NZ_JJLK01000077.1 Protein Homology CDS 133080 134600 . - 0 ID=cds-WP_032286732.1;Parent=gene-AD12_RS05220;Dbxref=GenBank:WP_032286732.1;Name=WP_032286732.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311981.2;locus_tag=AD12_RS05220;product=aerotaxis sensor receptor Aer;protein_id=WP_032286732.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 135018 136397 . + . ID=gene-AD12_RS05215;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AD12_RS05215;old_locus_tag=AD12_3775 NZ_JJLK01000077.1 Protein Homology CDS 135018 136397 . + 0 ID=cds-WP_032286743.1;Parent=gene-AD12_RS05215;Dbxref=GenBank:WP_032286743.1;Name=WP_032286743.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AD12_RS05215;product=putrescine aminotransferase;protein_id=WP_032286743.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 136439 136771 . - . ID=gene-AD12_RS05210;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AD12_RS05210;old_locus_tag=AD12_3776 NZ_JJLK01000077.1 Protein Homology CDS 136439 136771 . - 0 ID=cds-WP_000450589.1;Parent=gene-AD12_RS05210;Dbxref=GenBank:WP_000450589.1;Name=WP_000450589.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311983.1;locus_tag=AD12_RS05210;product=tRNA-binding protein;protein_id=WP_000450589.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 136990 137973 . + . ID=gene-AD12_RS05205;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AD12_RS05205;old_locus_tag=AD12_3777 NZ_JJLK01000077.1 Protein Homology CDS 136990 137973 . + 0 ID=cds-WP_000212468.1;Parent=gene-AD12_RS05205;Dbxref=GenBank:WP_000212468.1;Name=WP_000212468.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AD12_RS05205;product=transcriptional regulator EbgR;protein_id=WP_000212468.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 138157 141249 . + . ID=gene-AD12_RS05200;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AD12_RS05200;old_locus_tag=AD12_3778 NZ_JJLK01000077.1 Protein Homology CDS 138157 141249 . + 0 ID=cds-WP_001082847.1;Parent=gene-AD12_RS05200;Dbxref=GenBank:WP_001082847.1;Name=WP_001082847.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311985.2;locus_tag=AD12_RS05200;product=beta-galactosidase subunit alpha;protein_id=WP_001082847.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 141246 141695 . + . ID=gene-AD12_RS05195;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AD12_RS05195;old_locus_tag=AD12_3779 NZ_JJLK01000077.1 Protein Homology CDS 141246 141695 . + 0 ID=cds-WP_001219954.1;Parent=gene-AD12_RS05195;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AD12_RS05195;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 141758 143191 . + . ID=gene-AD12_RS05190;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AD12_RS05190;old_locus_tag=AD12_3780 NZ_JJLK01000077.1 Protein Homology CDS 141758 143191 . + 0 ID=cds-WP_001388473.1;Parent=gene-AD12_RS05190;Dbxref=GenBank:WP_001388473.1;Name=WP_001388473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311987.1;locus_tag=AD12_RS05190;product=amino acid permease;protein_id=WP_001388473.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 143325 144395 . + . ID=gene-AD12_RS05185;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AD12_RS05185;old_locus_tag=AD12_3781 NZ_JJLK01000077.1 Protein Homology CDS 143325 144395 . + 0 ID=cds-WP_000767652.1;Parent=gene-AD12_RS05185;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AD12_RS05185;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 144412 146763 . + . ID=gene-AD12_RS05180;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AD12_RS05180;old_locus_tag=AD12_3782 NZ_JJLK01000077.1 Protein Homology CDS 144412 146763 . + 0 ID=cds-WP_000695453.1;Parent=gene-AD12_RS05180;Dbxref=GenBank:WP_000695453.1;Name=WP_000695453.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AD12_RS05180;product=alpha-glucosidase;protein_id=WP_000695453.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 147089 149107 . + . ID=gene-AD12_RS05175;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AD12_RS05175;old_locus_tag=AD12_3784 NZ_JJLK01000077.1 Protein Homology CDS 147089 149107 . + 0 ID=cds-WP_000121423.1;Parent=gene-AD12_RS05175;Dbxref=GenBank:WP_000121423.1;Name=WP_000121423.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708886.1;locus_tag=AD12_RS05175;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121423.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 149152 149568 . - . ID=gene-AD12_RS05170;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AD12_RS05170;old_locus_tag=AD12_3785 NZ_JJLK01000077.1 Protein Homology CDS 149152 149568 . - 0 ID=cds-WP_000560266.1;Parent=gene-AD12_RS05170;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AD12_RS05170;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JJLK01000077.1 RefSeq pseudogene 149565 149642 . - . ID=gene-AD12_RS28890;Name=AD12_RS28890;end_range=149642,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28890;partial=true;pseudo=true NZ_JJLK01000077.1 Protein Homology CDS 149565 149642 . - 0 ID=cds-AD12_RS28890;Parent=gene-AD12_RS28890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=149642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AD12_RS28890;partial=true;product=type II toxin-antitoxin system toxin HigB;pseudo=true;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 149839 150975 . - . ID=gene-AD12_RS05160;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AD12_RS05160;old_locus_tag=AD12_3787 NZ_JJLK01000077.1 Protein Homology CDS 149839 150975 . - 0 ID=cds-WP_000018690.1;Parent=gene-AD12_RS05160;Dbxref=GenBank:WP_000018690.1;Name=WP_000018690.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AD12_RS05160;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018690.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 151060 151563 . + . ID=gene-AD12_RS05155;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AD12_RS05155;old_locus_tag=AD12_3788 NZ_JJLK01000077.1 Protein Homology CDS 151060 151563 . + 0 ID=cds-WP_032286733.1;Parent=gene-AD12_RS05155;Dbxref=GenBank:WP_032286733.1;Name=WP_032286733.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311994.2;locus_tag=AD12_RS05155;product=M48 metallopeptidase family protein;protein_id=WP_032286733.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 151640 152323 . + . ID=gene-AD12_RS05150;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AD12_RS05150;old_locus_tag=AD12_3789 NZ_JJLK01000077.1 Protein Homology CDS 151640 152323 . + 0 ID=cds-WP_001183042.1;Parent=gene-AD12_RS05150;Dbxref=GenBank:WP_001183042.1;Name=WP_001183042.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183047.1;locus_tag=AD12_RS05150;product=SanA/YdcF family protein;protein_id=WP_001183042.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 152402 153388 . + . ID=gene-AD12_RS05145;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AD12_RS05145;old_locus_tag=AD12_3790 NZ_JJLK01000077.1 Protein Homology CDS 152402 153388 . + 0 ID=cds-WP_001297165.1;Parent=gene-AD12_RS05145;Dbxref=GenBank:WP_001297165.1;Name=WP_001297165.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AD12_RS05145;product=Gfo/Idh/MocA family protein;protein_id=WP_001297165.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 153671 154636 . + . ID=gene-AD12_RS05140;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AD12_RS05140;old_locus_tag=AD12_3791 NZ_JJLK01000077.1 Protein Homology CDS 153671 154636 . + 0 ID=cds-WP_001098806.1;Parent=gene-AD12_RS05140;Dbxref=GenBank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=AD12_RS05140;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 155037 156281 . + . ID=gene-AD12_RS05135;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AD12_RS05135;old_locus_tag=AD12_3793 NZ_JJLK01000077.1 Protein Homology CDS 155037 156281 . + 0 ID=cds-WP_000211655.1;Parent=gene-AD12_RS05135;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AD12_RS05135;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JJLK01000077.1 RefSeq pseudogene 156286 156836 . - . ID=gene-AD12_RS05130;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=pseudogene;locus_tag=AD12_RS05130;old_locus_tag=AD12_3794;pseudo=true NZ_JJLK01000077.1 Protein Homology CDS 156286 156836 . - 0 ID=cds-AD12_RS05130;Parent=gene-AD12_RS05130;Note=frameshifted;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AD12_RS05130;product=YgjV family protein;pseudo=true;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 156919 158406 . - . ID=gene-AD12_RS05125;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AD12_RS05125;old_locus_tag=AD12_3795 NZ_JJLK01000077.1 Protein Homology CDS 156919 158406 . - 0 ID=cds-WP_001199376.1;Parent=gene-AD12_RS05125;Dbxref=GenBank:WP_001199376.1;Name=WP_001199376.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AD12_RS05125;product=altronate dehydratase;protein_id=WP_001199376.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 158421 159833 . - . ID=gene-AD12_RS05120;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AD12_RS05120;old_locus_tag=AD12_3796 NZ_JJLK01000077.1 Protein Homology CDS 158421 159833 . - 0 ID=cds-WP_000187441.1;Parent=gene-AD12_RS05120;Dbxref=GenBank:WP_000187441.1;Name=WP_000187441.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AD12_RS05120;product=glucuronate isomerase;protein_id=WP_000187441.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 160316 161614 . + . ID=gene-AD12_RS05115;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AD12_RS05115;old_locus_tag=AD12_3797 NZ_JJLK01000077.1 Protein Homology CDS 160316 161614 . + 0 ID=cds-WP_001226463.1;Parent=gene-AD12_RS05115;Dbxref=GenBank:WP_001226463.1;Name=WP_001226463.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AD12_RS05115;product=hexuronate transporter ExuT;protein_id=WP_001226463.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 161702 162790 . - . ID=gene-AD12_RS0125050;Name=AD12_RS0125050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125050 NZ_JJLK01000077.1 Protein Homology CDS 161702 162790 . - 0 ID=cds-WP_001245988.1;Parent=gene-AD12_RS0125050;Dbxref=GenBank:WP_001245988.1;Name=WP_001245988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352530.1;locus_tag=AD12_RS0125050;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_001245988.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 162787 165471 . - . ID=gene-AD12_RS05110;Name=AD12_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05110;old_locus_tag=AD12_3799 NZ_JJLK01000077.1 Protein Homology CDS 162787 165471 . - 0 ID=cds-WP_000358674.1;Parent=gene-AD12_RS05110;Dbxref=GenBank:WP_000358674.1;Name=WP_000358674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666746.1;locus_tag=AD12_RS05110;product=TcfC E-set like domain-containing protein;protein_id=WP_000358674.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 165563 166063 . - . ID=gene-AD12_RS05105;Name=AD12_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05105;old_locus_tag=AD12_3800 NZ_JJLK01000077.1 Protein Homology CDS 165563 166063 . - 0 ID=cds-WP_000755097.1;Parent=gene-AD12_RS05105;Dbxref=GenBank:WP_000755097.1;Name=WP_000755097.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755097.1;locus_tag=AD12_RS05105;product=CS1 type fimbrial major subunit;protein_id=WP_000755097.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 166093 166809 . - . ID=gene-AD12_RS05100;Name=AD12_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05100;old_locus_tag=AD12_3801 NZ_JJLK01000077.1 Protein Homology CDS 166093 166809 . - 0 ID=cds-WP_000225866.1;Parent=gene-AD12_RS05100;Dbxref=GenBank:WP_000225866.1;Name=WP_000225866.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225871.1;locus_tag=AD12_RS05100;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000225866.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 167105 167881 . + . ID=gene-AD12_RS05095;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AD12_RS05095;old_locus_tag=AD12_3802 NZ_JJLK01000077.1 Protein Homology CDS 167105 167881 . + 0 ID=cds-WP_000406488.1;Parent=gene-AD12_RS05095;Dbxref=GenBank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AD12_RS05095;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 168121 168204 . + . ID=gene-AD12_RS29315;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AD12_RS29315 NZ_JJLK01000077.1 Protein Homology CDS 168121 168204 . + 0 ID=cds-WP_211180508.1;Parent=gene-AD12_RS29315;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AD12_RS29315;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 168226 168888 . + . ID=gene-AD12_RS05090;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AD12_RS05090;old_locus_tag=AD12_3803 NZ_JJLK01000077.1 Protein Homology CDS 168226 168888 . + 0 ID=cds-WP_000422149.1;Parent=gene-AD12_RS05090;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AD12_RS05090;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 168892 169275 . + . ID=gene-AD12_RS05085;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AD12_RS05085;old_locus_tag=AD12_3804 NZ_JJLK01000077.1 Protein Homology CDS 168892 169275 . + 0 ID=cds-WP_001166768.1;Parent=gene-AD12_RS05085;Dbxref=GenBank:WP_001166768.1;Name=WP_001166768.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AD12_RS05085;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166768.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 169422 169790 . + . ID=gene-AD12_RS05080;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AD12_RS05080;old_locus_tag=AD12_3805 NZ_JJLK01000077.1 Protein Homology CDS 169422 169790 . + 0 ID=cds-WP_001297156.1;Parent=gene-AD12_RS05080;Dbxref=GenBank:WP_001297156.1;Name=WP_001297156.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AD12_RS05080;product=DUF1090 family protein YqjC;protein_id=WP_001297156.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 169828 170133 . + . ID=gene-AD12_RS05075;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AD12_RS05075;old_locus_tag=AD12_3806 NZ_JJLK01000077.1 Protein Homology CDS 169828 170133 . + 0 ID=cds-WP_000031415.1;Parent=gene-AD12_RS05075;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AD12_RS05075;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 170136 170540 . + . ID=gene-AD12_RS05070;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AD12_RS05070;old_locus_tag=AD12_3807 NZ_JJLK01000077.1 Protein Homology CDS 170136 170540 . + 0 ID=cds-WP_000785722.1;Parent=gene-AD12_RS05070;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AD12_RS05070;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 170530 170829 . + . ID=gene-AD12_RS05065;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AD12_RS05065;old_locus_tag=AD12_3808 NZ_JJLK01000077.1 Protein Homology CDS 170530 170829 . + 0 ID=cds-WP_000096086.1;Parent=gene-AD12_RS05065;Dbxref=GenBank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=AD12_RS05065;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 171015 171407 . + . ID=gene-AD12_RS05060;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AD12_RS05060;old_locus_tag=AD12_3809 NZ_JJLK01000077.1 Protein Homology CDS 171015 171407 . + 0 ID=cds-WP_000732240.1;Parent=gene-AD12_RS05060;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AD12_RS05060;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 171477 172463 . + . ID=gene-AD12_RS05055;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AD12_RS05055;old_locus_tag=AD12_3810 NZ_JJLK01000077.1 Protein Homology CDS 171477 172463 . + 0 ID=cds-WP_000531204.1;Parent=gene-AD12_RS05055;Dbxref=GenBank:WP_000531204.1;Name=WP_000531204.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=AD12_RS05055;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531204.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 172756 173121 . + . ID=gene-AD12_RS05050;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AD12_RS05050;old_locus_tag=AD12_3811 NZ_JJLK01000077.1 Protein Homology CDS 172756 173121 . + 0 ID=cds-WP_000384145.1;Parent=gene-AD12_RS05050;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AD12_RS05050;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 173363 173719 . + . ID=gene-AD12_RS05045;Name=AD12_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS05045;old_locus_tag=AD12_3812 NZ_JJLK01000077.1 Protein Homology CDS 173363 173719 . + 0 ID=cds-WP_001198780.1;Parent=gene-AD12_RS05045;Dbxref=GenBank:WP_001198780.1;Name=WP_001198780.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AD12_RS05045;product=DUF805 domain-containing protein;protein_id=WP_001198780.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 173770 174666 . - . ID=gene-AD12_RS05040;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AD12_RS05040;old_locus_tag=AD12_3813 NZ_JJLK01000077.1 Protein Homology CDS 173770 174666 . - 0 ID=cds-WP_001041010.1;Parent=gene-AD12_RS05040;Dbxref=GenBank:WP_001041010.1;Name=WP_001041010.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AD12_RS05040;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041010.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 174771 175472 . + . ID=gene-AD12_RS05035;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AD12_RS05035;old_locus_tag=AD12_3814 NZ_JJLK01000077.1 Protein Homology CDS 174771 175472 . + 0 ID=cds-WP_000633577.1;Parent=gene-AD12_RS05035;Dbxref=GenBank:WP_000633577.1;Name=WP_000633577.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AD12_RS05035;product=pirin family protein;protein_id=WP_000633577.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 175495 175659 . + . ID=gene-AD12_RS05030;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AD12_RS05030;old_locus_tag=AD12_3815 NZ_JJLK01000077.1 Protein Homology CDS 175495 175659 . + 0 ID=cds-WP_001295544.1;Parent=gene-AD12_RS05030;Dbxref=GenBank:WP_001295544.1;Name=WP_001295544.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312016.2;locus_tag=AD12_RS05030;product=protein YhaL;protein_id=WP_001295544.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 175871 177181 . - . ID=gene-AD12_RS05025;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AD12_RS05025;old_locus_tag=AD12_3817 NZ_JJLK01000077.1 Protein Homology CDS 175871 177181 . - 0 ID=cds-WP_000460519.1;Parent=gene-AD12_RS05025;Dbxref=GenBank:WP_000460519.1;Name=WP_000460519.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=AD12_RS05025;product=cysteine desulfidase;protein_id=WP_000460519.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 177209 178540 . - . ID=gene-AD12_RS05020;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AD12_RS05020;old_locus_tag=AD12_3818 NZ_JJLK01000077.1 Protein Homology CDS 177209 178540 . - 0 ID=cds-WP_000401598.1;Parent=gene-AD12_RS05020;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AD12_RS05020;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 178815 180179 . - . ID=gene-AD12_RS05015;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AD12_RS05015;old_locus_tag=AD12_3819 NZ_JJLK01000077.1 Protein Homology CDS 178815 180179 . - 0 ID=cds-WP_000622115.1;Parent=gene-AD12_RS05015;Dbxref=GenBank:WP_000622115.1;Name=WP_000622115.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AD12_RS05015;product=L-serine ammonia-lyase;protein_id=WP_000622115.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 180251 180640 . - . ID=gene-AD12_RS05010;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AD12_RS05010;old_locus_tag=AD12_3820 NZ_JJLK01000077.1 Protein Homology CDS 180251 180640 . - 0 ID=cds-WP_000719990.1;Parent=gene-AD12_RS05010;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AD12_RS05010;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 180654 182948 . - . ID=gene-AD12_RS05005;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AD12_RS05005;old_locus_tag=AD12_3821 NZ_JJLK01000077.1 Protein Homology CDS 180654 182948 . - 0 ID=cds-WP_000861734.1;Parent=gene-AD12_RS05005;Dbxref=GenBank:WP_000861734.1;Name=WP_000861734.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AD12_RS05005;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861734.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 182982 184190 . - . ID=gene-AD12_RS05000;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AD12_RS05000;old_locus_tag=AD12_3822 NZ_JJLK01000077.1 Protein Homology CDS 182982 184190 . - 0 ID=cds-WP_001297162.1;Parent=gene-AD12_RS05000;Dbxref=GenBank:WP_001297162.1;Name=WP_001297162.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AD12_RS05000;product=propionate kinase;protein_id=WP_001297162.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 184216 185547 . - . ID=gene-AD12_RS04995;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AD12_RS04995;old_locus_tag=AD12_3823 NZ_JJLK01000077.1 Protein Homology CDS 184216 185547 . - 0 ID=cds-WP_000107720.1;Parent=gene-AD12_RS04995;Dbxref=GenBank:WP_000107720.1;Name=WP_000107720.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AD12_RS04995;product=threonine/serine transporter TdcC;protein_id=WP_000107720.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 185569 186558 . - . ID=gene-AD12_RS04990;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AD12_RS04990;old_locus_tag=AD12_3824 NZ_JJLK01000077.1 Protein Homology CDS 185569 186558 . - 0 ID=cds-WP_000548347.1;Parent=gene-AD12_RS04990;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AD12_RS04990;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 186657 187595 . - . ID=gene-AD12_RS04985;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AD12_RS04985;old_locus_tag=AD12_3825 NZ_JJLK01000077.1 Protein Homology CDS 186657 187595 . - 0 ID=cds-WP_001555067.1;Parent=gene-AD12_RS04985;Dbxref=GenBank:WP_001555067.1;Name=WP_001555067.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AD12_RS04985;product=transcriptional regulator TdcA;protein_id=WP_001555067.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 187910 188128 . + . ID=gene-AD12_RS29210;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AD12_RS29210 NZ_JJLK01000077.1 Protein Homology CDS 187910 188128 . + 0 ID=cds-WP_001390702.1;Parent=gene-AD12_RS29210;Dbxref=GenBank:WP_001390702.1;Name=WP_001390702.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AD12_RS29210;product=transcriptional activator TdcR;protein_id=WP_001390702.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 188384 188923 . + . ID=gene-AD12_RS04975;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AD12_RS04975;old_locus_tag=AD12_3827 NZ_JJLK01000077.1 Protein Homology CDS 188384 188923 . + 0 ID=cds-WP_000675746.1;Parent=gene-AD12_RS04975;Dbxref=GenBank:WP_000675746.1;Name=WP_000675746.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312027.2;locus_tag=AD12_RS04975;product=protein YhaB;protein_id=WP_000675746.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 188945 190132 . + . ID=gene-AD12_RS04970;Name=AD12_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04970;old_locus_tag=AD12_3828 NZ_JJLK01000077.1 Protein Homology CDS 188945 190132 . + 0 ID=cds-WP_000484577.1;Parent=gene-AD12_RS04970;Dbxref=GenBank:WP_000484577.1;Name=WP_000484577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AD12_RS04970;product=YhaC family protein;protein_id=WP_000484577.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 190972 191348 . - . ID=gene-AD12_RS25680;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AD12_RS25680 NZ_JJLK01000077.1 cmsearch RNase_P_RNA 190972 191348 . - . ID=rna-AD12_RS25680;Parent=gene-AD12_RS25680;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25680;product=RNase P RNA component class A NZ_JJLK01000077.1 cmsearch exon 190972 191348 . - . ID=exon-AD12_RS25680-1;Parent=rna-AD12_RS25680;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25680;product=RNase P RNA component class A NZ_JJLK01000077.1 RefSeq gene 191381 192526 . - . ID=gene-AD12_RS04965;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AD12_RS04965;old_locus_tag=AD12_3829 NZ_JJLK01000077.1 Protein Homology CDS 191381 192526 . - 0 ID=cds-WP_001299416.1;Parent=gene-AD12_RS04965;Dbxref=GenBank:WP_001299416.1;Name=WP_001299416.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=AD12_RS04965;product=glycerate 2-kinase;protein_id=WP_001299416.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 192623 193513 . - . ID=gene-AD12_RS04960;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AD12_RS04960;old_locus_tag=AD12_3830 NZ_JJLK01000077.1 Protein Homology CDS 192623 193513 . - 0 ID=cds-WP_001303675.1;Parent=gene-AD12_RS04960;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AD12_RS04960;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 193543 194313 . - . ID=gene-AD12_RS04955;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AD12_RS04955;old_locus_tag=AD12_3831 NZ_JJLK01000077.1 Protein Homology CDS 193543 194313 . - 0 ID=cds-WP_001058214.1;Parent=gene-AD12_RS04955;Dbxref=GenBank:WP_001058214.1;Name=WP_001058214.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312031.1;locus_tag=AD12_RS04955;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058214.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 194329 195663 . - . ID=gene-AD12_RS04950;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AD12_RS04950;old_locus_tag=AD12_3832 NZ_JJLK01000077.1 Protein Homology CDS 194329 195663 . - 0 ID=cds-WP_000599653.1;Parent=gene-AD12_RS04950;Dbxref=GenBank:WP_000599653.1;Name=WP_000599653.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AD12_RS04950;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599653.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 196038 197609 . + . ID=gene-AD12_RS04945;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AD12_RS04945;old_locus_tag=AD12_3835 NZ_JJLK01000077.1 Protein Homology CDS 196038 197609 . + 0 ID=cds-WP_001273761.1;Parent=gene-AD12_RS04945;Dbxref=GenBank:WP_001273761.1;Name=WP_001273761.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AD12_RS04945;product=galactarate dehydratase;protein_id=WP_001273761.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 197758 198093 . + . ID=gene-AD12_RS0125055;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AD12_RS0125055;old_locus_tag=AD12_3836 NZ_JJLK01000077.1 Protein Homology CDS 197758 198093 . + 0 ID=cds-WP_001307405.1;Parent=gene-AD12_RS0125055;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AD12_RS0125055;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 198093 198557 . + . ID=gene-AD12_RS04940;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AD12_RS04940;old_locus_tag=AD12_3837 NZ_JJLK01000077.1 Protein Homology CDS 198093 198557 . + 0 ID=cds-WP_000347251.1;Parent=gene-AD12_RS04940;Dbxref=GenBank:WP_000347251.1;Name=WP_000347251.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AD12_RS04940;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347251.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 198612 199421 . - . ID=gene-AD12_RS04935;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AD12_RS04935;old_locus_tag=AD12_3838 NZ_JJLK01000077.1 Protein Homology CDS 198612 199421 . - 0 ID=cds-WP_000072187.1;Parent=gene-AD12_RS04935;Dbxref=GenBank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AD12_RS04935;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 199670 200950 . + . ID=gene-AD12_RS04930;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AD12_RS04930;old_locus_tag=AD12_3839 NZ_JJLK01000077.1 Protein Homology CDS 199670 200950 . + 0 ID=cds-WP_000681903.1;Parent=gene-AD12_RS04930;Dbxref=GenBank:WP_000681903.1;Name=WP_000681903.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AD12_RS04930;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681903.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 200973 201446 . + . ID=gene-AD12_RS04925;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AD12_RS04925;old_locus_tag=AD12_3840 NZ_JJLK01000077.1 Protein Homology CDS 200973 201446 . + 0 ID=cds-WP_001295547.1;Parent=gene-AD12_RS04925;Dbxref=GenBank:WP_001295547.1;Name=WP_001295547.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=AD12_RS04925;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001295547.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 201457 202236 . + . ID=gene-AD12_RS04920;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AD12_RS04920;old_locus_tag=AD12_3841 NZ_JJLK01000077.1 Protein Homology CDS 201457 202236 . + 0 ID=cds-WP_000406214.1;Parent=gene-AD12_RS04920;Dbxref=GenBank:WP_000406214.1;Name=WP_000406214.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AD12_RS04920;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406214.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 202226 203104 . + . ID=gene-AD12_RS04915;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AD12_RS04915;old_locus_tag=AD12_3842 NZ_JJLK01000077.1 Protein Homology CDS 202226 203104 . + 0 ID=cds-WP_001295548.1;Parent=gene-AD12_RS04915;Dbxref=GenBank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AD12_RS04915;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 203122 203556 . + . ID=gene-AD12_RS04910;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AD12_RS04910;old_locus_tag=AD12_3843 NZ_JJLK01000077.1 Protein Homology CDS 203122 203556 . + 0 ID=cds-WP_000948824.1;Parent=gene-AD12_RS04910;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AD12_RS04910;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 203553 204686 . + . ID=gene-AD12_RS04905;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD12_RS04905;old_locus_tag=AD12_3844 NZ_JJLK01000077.1 Protein Homology CDS 203553 204686 . + 0 ID=cds-WP_001324244.1;Parent=gene-AD12_RS04905;Dbxref=GenBank:WP_001324244.1;Name=WP_001324244.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AD12_RS04905;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001324244.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 205037 206191 . + . ID=gene-AD12_RS04900;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AD12_RS04900;old_locus_tag=AD12_3845 NZ_JJLK01000077.1 Protein Homology CDS 205037 206191 . + 0 ID=cds-WP_001125707.1;Parent=gene-AD12_RS04900;Dbxref=GenBank:WP_001125707.1;Name=WP_001125707.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AD12_RS04900;product=AgaS family sugar isomerase;protein_id=WP_001125707.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 206204 207064 . + . ID=gene-AD12_RS04895;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AD12_RS04895;old_locus_tag=AD12_3846 NZ_JJLK01000077.1 Protein Homology CDS 206204 207064 . + 0 ID=cds-WP_000022766.1;Parent=gene-AD12_RS04895;Dbxref=GenBank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AD12_RS04895;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 207231 207707 . + . ID=gene-AD12_RS04890;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=AD12_RS04890;old_locus_tag=AD12_3847 NZ_JJLK01000077.1 Protein Homology CDS 207231 207707 . + 0 ID=cds-WP_000098025.1;Parent=gene-AD12_RS04890;Dbxref=GenBank:WP_000098025.1;Name=WP_000098025.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=AD12_RS04890;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000098025.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 207746 208549 . + . ID=gene-AD12_RS04885;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AD12_RS04885;old_locus_tag=AD12_3848 NZ_JJLK01000077.1 Protein Homology CDS 207746 208549 . + 0 ID=cds-WP_000544489.1;Parent=gene-AD12_RS04885;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AD12_RS04885;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 208539 209330 . + . ID=gene-AD12_RS04880;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=AD12_RS04880;old_locus_tag=AD12_3849 NZ_JJLK01000077.1 Protein Homology CDS 208539 209330 . + 0 ID=cds-WP_000534351.1;Parent=gene-AD12_RS04880;Dbxref=GenBank:WP_000534351.1;Name=WP_000534351.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708938.2;locus_tag=AD12_RS04880;product=PTS galactosamine transporter subunit IID;protein_id=WP_000534351.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 209331 210086 . + . ID=gene-AD12_RS04875;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=AD12_RS04875;old_locus_tag=AD12_3850 NZ_JJLK01000077.1 Protein Homology CDS 209331 210086 . + 0 ID=cds-WP_001323952.1;Parent=gene-AD12_RS04875;Dbxref=GenBank:WP_001323952.1;Name=WP_001323952.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417610.1;locus_tag=AD12_RS04875;product=galactosamine-6-phosphate isomerase;protein_id=WP_001323952.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 210487 211071 . + . ID=gene-AD12_RS04870;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;locus_tag=AD12_RS04870;old_locus_tag=AD12_3851 NZ_JJLK01000077.1 Protein Homology CDS 210487 211071 . + 0 ID=cds-WP_001045434.1;Parent=gene-AD12_RS04870;Dbxref=GenBank:WP_001045434.1;Name=WP_001045434.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraH;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312047.1;locus_tag=AD12_RS04870;product=fimbrial protein;protein_id=WP_001045434.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 211151 211846 . + . ID=gene-AD12_RS04865;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=AD12_RS04865;old_locus_tag=AD12_3852 NZ_JJLK01000077.1 Protein Homology CDS 211151 211846 . + 0 ID=cds-WP_000044770.1;Parent=gene-AD12_RS04865;Dbxref=GenBank:WP_000044770.1;Name=WP_000044770.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yraI;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AD12_RS04865;product=fimbrial biogenesis chaperone;protein_id=WP_000044770.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 211876 214392 . + . ID=gene-AD12_RS04860;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=AD12_RS04860;old_locus_tag=AD12_3853 NZ_JJLK01000077.1 Protein Homology CDS 211876 214392 . + 0 ID=cds-WP_001136488.1;Parent=gene-AD12_RS04860;Dbxref=GenBank:WP_001136488.1;Name=WP_001136488.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=yraJ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312049.1;locus_tag=AD12_RS04860;product=fimbria/pilus outer membrane usher protein;protein_id=WP_001136488.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 214403 215494 . + . ID=gene-AD12_RS04855;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=AD12_RS04855;old_locus_tag=AD12_3854 NZ_JJLK01000077.1 Protein Homology CDS 214403 215494 . + 0 ID=cds-WP_000816988.1;Parent=gene-AD12_RS04855;Dbxref=GenBank:WP_000816988.1;Name=WP_000816988.1;gbkey=CDS;gene=yraK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AD12_RS04855;product=fimbrial protein;protein_id=WP_000816988.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 215537 216397 . - . ID=gene-AD12_RS04850;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AD12_RS04850;old_locus_tag=AD12_3855 NZ_JJLK01000077.1 Protein Homology CDS 215537 216397 . - 0 ID=cds-WP_000809262.1;Parent=gene-AD12_RS04850;Dbxref=GenBank:WP_000809262.1;Name=WP_000809262.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AD12_RS04850;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 216462 218498 . + . ID=gene-AD12_RS04845;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AD12_RS04845;old_locus_tag=AD12_3856 NZ_JJLK01000077.1 Protein Homology CDS 216462 218498 . + 0 ID=cds-WP_000249160.1;Parent=gene-AD12_RS04845;Dbxref=GenBank:WP_000249160.1;Name=WP_000249160.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312055.1;locus_tag=AD12_RS04845;product=penicillin-binding protein activator LpoA;protein_id=WP_000249160.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 218456 218851 . + . ID=gene-AD12_RS04840;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AD12_RS04840;old_locus_tag=AD12_3857 NZ_JJLK01000077.1 Protein Homology CDS 218456 218851 . + 0 ID=cds-WP_000246837.1;Parent=gene-AD12_RS04840;Dbxref=GenBank:WP_000246837.1;Name=WP_000246837.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AD12_RS04840;product=YraN family protein;protein_id=WP_000246837.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 218871 219461 . + . ID=gene-AD12_RS04835;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AD12_RS04835;old_locus_tag=AD12_3858 NZ_JJLK01000077.1 Protein Homology CDS 218871 219461 . + 0 ID=cds-WP_001158034.1;Parent=gene-AD12_RS04835;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AD12_RS04835;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 219471 220046 . + . ID=gene-AD12_RS04830;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AD12_RS04830;old_locus_tag=AD12_3859 NZ_JJLK01000077.1 Protein Homology CDS 219471 220046 . + 0 ID=cds-WP_000646033.1;Parent=gene-AD12_RS04830;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AD12_RS04830;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 220251 221291 . - . ID=gene-AD12_RS04825;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AD12_RS04825;old_locus_tag=AD12_3860 NZ_JJLK01000077.1 Protein Homology CDS 220251 221291 . - 0 ID=cds-WP_000147576.1;Parent=gene-AD12_RS04825;Dbxref=GenBank:WP_000147576.1;Name=WP_000147576.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AD12_RS04825;product=permease;protein_id=WP_000147576.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 221364 221999 . - . ID=gene-AD12_RS04820;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AD12_RS04820;old_locus_tag=AD12_3861 NZ_JJLK01000077.1 Protein Homology CDS 221364 221999 . - 0 ID=cds-WP_001295551.1;Parent=gene-AD12_RS04820;Dbxref=GenBank:WP_001295551.1;Name=WP_001295551.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AD12_RS04820;product=NAD(P)H-binding protein;protein_id=WP_001295551.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 222127 222645 . + . ID=gene-AD12_RS04815;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AD12_RS04815;old_locus_tag=AD12_3862 NZ_JJLK01000077.1 Protein Homology CDS 222127 222645 . + 0 ID=cds-WP_000037608.1;Parent=gene-AD12_RS04815;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AD12_RS04815;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 222625 223068 . - . ID=gene-AD12_RS04810;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AD12_RS04810;old_locus_tag=AD12_3863 NZ_JJLK01000077.1 Protein Homology CDS 222625 223068 . - 0 ID=cds-WP_000449030.1;Parent=gene-AD12_RS04810;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AD12_RS04810;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 223119 223421 . + . ID=gene-AD12_RS04805;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AD12_RS04805;old_locus_tag=AD12_3864 NZ_JJLK01000077.1 Protein Homology CDS 223119 223421 . + 0 ID=cds-WP_000189314.1;Parent=gene-AD12_RS04805;Dbxref=GenBank:WP_000189314.1;Name=WP_000189314.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708956.2;locus_tag=AD12_RS04805;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189314.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 223408 223911 . - . ID=gene-AD12_RS04800;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AD12_RS04800;old_locus_tag=AD12_3865 NZ_JJLK01000077.1 Protein Homology CDS 223408 223911 . - 0 ID=cds-WP_000908554.1;Parent=gene-AD12_RS04800;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AD12_RS04800;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 223905 224429 . - . ID=gene-AD12_RS04795;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AD12_RS04795;old_locus_tag=AD12_3866 NZ_JJLK01000077.1 Protein Homology CDS 223905 224429 . - 0 ID=cds-WP_001295552.1;Parent=gene-AD12_RS04795;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AD12_RS04795;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 224638 225633 . + . ID=gene-AD12_RS04790;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AD12_RS04790;old_locus_tag=AD12_3867 NZ_JJLK01000077.1 Protein Homology CDS 224638 225633 . + 0 ID=cds-WP_000421305.1;Parent=gene-AD12_RS04790;Dbxref=GenBank:WP_000421305.1;Name=WP_000421305.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AD12_RS04790;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421305.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 225642 226520 . + . ID=gene-AD12_RS04785;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AD12_RS04785;old_locus_tag=AD12_3868 NZ_JJLK01000077.1 Protein Homology CDS 225642 226520 . + 0 ID=cds-WP_001301318.1;Parent=gene-AD12_RS04785;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AD12_RS04785;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 226726 227733 . + . ID=gene-AD12_RS04780;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AD12_RS04780;old_locus_tag=AD12_3869 NZ_JJLK01000077.1 Protein Homology CDS 226726 227733 . + 0 ID=cds-WP_000130392.1;Parent=gene-AD12_RS04780;Dbxref=GenBank:WP_000130392.1;Name=WP_000130392.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AD12_RS04780;product=luciferase-like monooxygenase;protein_id=WP_000130392.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 227851 229095 . - . ID=gene-AD12_RS04775;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AD12_RS04775;old_locus_tag=AD12_3870 NZ_JJLK01000077.1 Protein Homology CDS 227851 229095 . - 0 ID=cds-WP_000224340.1;Parent=gene-AD12_RS04775;Dbxref=GenBank:WP_000224340.1;Name=WP_000224340.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312069.1;locus_tag=AD12_RS04775;product=tryptophan permease;protein_id=WP_000224340.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 229249 231138 . - . ID=gene-AD12_RS04770;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AD12_RS04770;old_locus_tag=AD12_3871 NZ_JJLK01000077.1 Protein Homology CDS 229249 231138 . - 0 ID=cds-WP_001295553.1;Parent=gene-AD12_RS04770;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AD12_RS04770;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 231131 231211 . - . ID=gene-AD12_RS28290;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AD12_RS28290 NZ_JJLK01000077.1 Protein Homology CDS 231131 231211 . - 0 ID=cds-WP_010723222.1;Parent=gene-AD12_RS28290;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AD12_RS28290;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 231318 232202 . - . ID=gene-AD12_RS04765;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AD12_RS04765;old_locus_tag=AD12_3872 NZ_JJLK01000077.1 Protein Homology CDS 231318 232202 . - 0 ID=cds-WP_000802080.1;Parent=gene-AD12_RS04765;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AD12_RS04765;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 232311 234446 . - . ID=gene-AD12_RS04760;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AD12_RS04760;old_locus_tag=AD12_3873 NZ_JJLK01000077.1 Protein Homology CDS 232311 234446 . - 0 ID=cds-WP_001298740.1;Parent=gene-AD12_RS04760;Dbxref=GenBank:WP_001298740.1;Name=WP_001298740.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312072.2;locus_tag=AD12_RS04760;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001298740.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 234693 234962 . - . ID=gene-AD12_RS04755;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AD12_RS04755;old_locus_tag=AD12_3874 NZ_JJLK01000077.1 Protein Homology CDS 234693 234962 . - 0 ID=cds-WP_000059466.1;Parent=gene-AD12_RS04755;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AD12_RS04755;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 235111 236055 . - . ID=gene-AD12_RS04750;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AD12_RS04750;old_locus_tag=AD12_3875 NZ_JJLK01000077.1 Protein Homology CDS 235111 236055 . - 0 ID=cds-WP_000089698.1;Parent=gene-AD12_RS04750;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AD12_RS04750;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 236055 236456 . - . ID=gene-AD12_RS04745;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AD12_RS04745;old_locus_tag=AD12_3876 NZ_JJLK01000077.1 Protein Homology CDS 236055 236456 . - 0 ID=cds-WP_001040205.1;Parent=gene-AD12_RS04745;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AD12_RS04745;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 236620 239292 . - . ID=gene-AD12_RS04740;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AD12_RS04740;old_locus_tag=AD12_3877 NZ_JJLK01000077.1 Protein Homology CDS 236620 239292 . - 0 ID=cds-WP_000133044.1;Parent=gene-AD12_RS04740;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AD12_RS04740;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 239317 240804 . - . ID=gene-AD12_RS04735;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AD12_RS04735;old_locus_tag=AD12_3878 NZ_JJLK01000077.1 Protein Homology CDS 239317 240804 . - 0 ID=cds-WP_001031057.1;Parent=gene-AD12_RS04735;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AD12_RS04735;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 240832 241284 . - . ID=gene-AD12_RS04730;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AD12_RS04730;old_locus_tag=AD12_3879 NZ_JJLK01000077.1 Protein Homology CDS 240832 241284 . - 0 ID=cds-WP_001300397.1;Parent=gene-AD12_RS04730;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AD12_RS04730;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 241491 241567 . - . ID=gene-AD12_RS04725;Name=AD12_RS04725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS04725;old_locus_tag=AD12_3880 NZ_JJLK01000077.1 tRNAscan-SE tRNA 241491 241567 . - . ID=rna-AD12_RS04725;Parent=gene-AD12_RS04725;anticodon=(pos:complement(241531..241533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04725;product=tRNA-Met NZ_JJLK01000077.1 tRNAscan-SE exon 241491 241567 . - . ID=exon-AD12_RS04725-1;Parent=rna-AD12_RS04725;anticodon=(pos:complement(241531..241533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04725;product=tRNA-Met NZ_JJLK01000077.1 RefSeq gene 241915 243258 . + . ID=gene-AD12_RS04720;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AD12_RS04720;old_locus_tag=AD12_3882 NZ_JJLK01000077.1 Protein Homology CDS 241915 243258 . + 0 ID=cds-WP_000207683.1;Parent=gene-AD12_RS04720;Dbxref=GenBank:WP_000207683.1;Name=WP_000207683.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AD12_RS04720;product=argininosuccinate synthase;protein_id=WP_000207683.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 243266 244891 . - . ID=gene-AD12_RS04715;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AD12_RS04715;old_locus_tag=AD12_3883 NZ_JJLK01000077.1 Protein Homology CDS 243266 244891 . - 0 ID=cds-WP_001323957.1;Parent=gene-AD12_RS04715;Dbxref=GenBank:WP_001323957.1;Name=WP_001323957.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AD12_RS04715;product=phosphoethanolamine transferase;protein_id=WP_001323957.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 245350 245436 . - . ID=gene-AD12_RS04710;Name=AD12_RS04710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS04710;old_locus_tag=AD12_3884 NZ_JJLK01000077.1 tRNAscan-SE tRNA 245350 245436 . - . ID=rna-AD12_RS04710;Parent=gene-AD12_RS04710;anticodon=(pos:complement(245400..245402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04710;product=tRNA-Leu NZ_JJLK01000077.1 tRNAscan-SE exon 245350 245436 . - . ID=exon-AD12_RS04710-1;Parent=rna-AD12_RS04710;anticodon=(pos:complement(245400..245402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04710;product=tRNA-Leu NZ_JJLK01000077.1 RefSeq gene 245451 245783 . - . ID=gene-AD12_RS04705;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AD12_RS04705;old_locus_tag=AD12_3885 NZ_JJLK01000077.1 Protein Homology CDS 245451 245783 . - 0 ID=cds-WP_001297427.1;Parent=gene-AD12_RS04705;Dbxref=GenBank:WP_001297427.1;Name=WP_001297427.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AD12_RS04705;product=preprotein translocase subunit SecG;protein_id=WP_001297427.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 246011 247348 . - . ID=gene-AD12_RS04700;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AD12_RS04700;old_locus_tag=AD12_3886 NZ_JJLK01000077.1 Protein Homology CDS 246011 247348 . - 0 ID=cds-WP_000071134.1;Parent=gene-AD12_RS04700;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AD12_RS04700;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 247341 248189 . - . ID=gene-AD12_RS04695;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AD12_RS04695;old_locus_tag=AD12_3887 NZ_JJLK01000077.1 Protein Homology CDS 247341 248189 . - 0 ID=cds-WP_032286737.1;Parent=gene-AD12_RS04695;Dbxref=GenBank:WP_032286737.1;Name=WP_032286737.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AD12_RS04695;product=dihydropteroate synthase;protein_id=WP_032286737.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 248279 250213 . - . ID=gene-AD12_RS04690;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AD12_RS04690;old_locus_tag=AD12_3888 NZ_JJLK01000077.1 Protein Homology CDS 248279 250213 . - 0 ID=cds-WP_001107467.1;Parent=gene-AD12_RS04690;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AD12_RS04690;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 250313 250942 . - . ID=gene-AD12_RS04685;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AD12_RS04685;old_locus_tag=AD12_3889 NZ_JJLK01000077.1 Protein Homology CDS 250313 250942 . - 0 ID=cds-WP_000145975.1;Parent=gene-AD12_RS04685;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AD12_RS04685;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 251068 251361 . + . ID=gene-AD12_RS04680;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AD12_RS04680;old_locus_tag=AD12_3890 NZ_JJLK01000077.1 Protein Homology CDS 251068 251361 . + 0 ID=cds-WP_001054420.1;Parent=gene-AD12_RS04680;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AD12_RS04680;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 251517 251993 . - . ID=gene-AD12_RS04675;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AD12_RS04675;old_locus_tag=AD12_3891 NZ_JJLK01000077.1 Protein Homology CDS 251517 251993 . - 0 ID=cds-WP_001148001.1;Parent=gene-AD12_RS04675;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AD12_RS04675;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 252241 253674 . + . ID=gene-AD12_RS04670;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AD12_RS04670;old_locus_tag=AD12_3892 NZ_JJLK01000077.1 Protein Homology CDS 252241 253674 . + 0 ID=cds-WP_001212662.1;Parent=gene-AD12_RS04670;Dbxref=GenBank:WP_001212662.1;Name=WP_001212662.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AD12_RS04670;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212662.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 253860 255032 . - . ID=gene-AD12_RS04665;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AD12_RS04665;old_locus_tag=AD12_3893 NZ_JJLK01000077.1 Protein Homology CDS 253860 255032 . - 0 ID=cds-WP_000673561.1;Parent=gene-AD12_RS04665;Dbxref=GenBank:WP_000673561.1;Name=WP_000673561.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708982.1;locus_tag=AD12_RS04665;product=Obg family GTPase CgtA;protein_id=WP_000673561.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 255048 256013 . - . ID=gene-AD12_RS04660;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AD12_RS04660;old_locus_tag=AD12_3894 NZ_JJLK01000077.1 Protein Homology CDS 255048 256013 . - 0 ID=cds-WP_000813037.1;Parent=gene-AD12_RS04660;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AD12_RS04660;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 256140 256397 . - . ID=gene-AD12_RS04655;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AD12_RS04655;old_locus_tag=AD12_3895 NZ_JJLK01000077.1 Protein Homology CDS 256140 256397 . - 0 ID=cds-WP_000940595.1;Parent=gene-AD12_RS04655;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AD12_RS04655;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 256418 256729 . - . ID=gene-AD12_RS04650;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AD12_RS04650;old_locus_tag=AD12_3896 NZ_JJLK01000077.1 Protein Homology CDS 256418 256729 . - 0 ID=cds-WP_000271401.1;Parent=gene-AD12_RS04650;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AD12_RS04650;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 256988 257959 . + . ID=gene-AD12_RS04645;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AD12_RS04645;old_locus_tag=AD12_3897 NZ_JJLK01000077.1 Protein Homology CDS 256988 257959 . + 0 ID=cds-WP_001047336.1;Parent=gene-AD12_RS04645;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AD12_RS04645;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 258186 258464 . + . ID=gene-AD12_RS04640;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AD12_RS04640;old_locus_tag=AD12_3898 NZ_JJLK01000077.1 Protein Homology CDS 258186 258464 . + 0 ID=cds-WP_000445413.1;Parent=gene-AD12_RS04640;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AD12_RS04640;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 258512 259771 . - . ID=gene-AD12_RS04635;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AD12_RS04635;old_locus_tag=AD12_3899 NZ_JJLK01000077.1 Protein Homology CDS 258512 259771 . - 0 ID=cds-WP_000357259.1;Parent=gene-AD12_RS04635;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AD12_RS04635;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 259826 260080 . - . ID=gene-AD12_RS04630;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AD12_RS04630;old_locus_tag=AD12_3900 NZ_JJLK01000077.1 Protein Homology CDS 259826 260080 . - 0 ID=cds-WP_000429656.1;Parent=gene-AD12_RS04630;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AD12_RS04630;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 260240 260533 . - . ID=gene-AD12_RS04625;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AD12_RS04625;old_locus_tag=AD12_3901 NZ_JJLK01000077.1 Protein Homology CDS 260240 260533 . - 0 ID=cds-WP_000004488.1;Parent=gene-AD12_RS04625;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AD12_RS04625;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 260533 261168 . - . ID=gene-AD12_RS04620;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AD12_RS04620;old_locus_tag=AD12_3902 NZ_JJLK01000077.1 Protein Homology CDS 260533 261168 . - 0 ID=cds-WP_000476487.1;Parent=gene-AD12_RS04620;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AD12_RS04620;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 261187 261738 . - . ID=gene-AD12_RS04615;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AD12_RS04615;old_locus_tag=AD12_3903 NZ_JJLK01000077.1 Protein Homology CDS 261187 261738 . - 0 ID=cds-WP_001296448.1;Parent=gene-AD12_RS04615;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AD12_RS04615;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 261743 262525 . - . ID=gene-AD12_RS04610;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AD12_RS04610;old_locus_tag=AD12_3904 NZ_JJLK01000077.1 Protein Homology CDS 261743 262525 . - 0 ID=cds-WP_000925795.1;Parent=gene-AD12_RS04610;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AD12_RS04610;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 262533 263342 . - . ID=gene-AD12_RS04605;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AD12_RS04605;old_locus_tag=AD12_3905 NZ_JJLK01000077.1 Protein Homology CDS 262533 263342 . - 0 ID=cds-WP_000438245.1;Parent=gene-AD12_RS04605;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AD12_RS04605;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 263552 264529 . + . ID=gene-AD12_RS04600;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AD12_RS04600;old_locus_tag=AD12_3906 NZ_JJLK01000077.1 Protein Homology CDS 263552 264529 . + 0 ID=cds-WP_000922872.1;Parent=gene-AD12_RS04600;Dbxref=GenBank:WP_000922872.1;Name=WP_000922872.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312102.1;locus_tag=AD12_RS04600;product=calcium/sodium antiporter;protein_id=WP_000922872.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 264543 265529 . + . ID=gene-AD12_RS04595;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AD12_RS04595;old_locus_tag=AD12_3907 NZ_JJLK01000077.1 Protein Homology CDS 264543 265529 . + 0 ID=cds-WP_001295557.1;Parent=gene-AD12_RS04595;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AD12_RS04595;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 265550 266116 . + . ID=gene-AD12_RS04590;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AD12_RS04590;old_locus_tag=AD12_3908 NZ_JJLK01000077.1 Protein Homology CDS 265550 266116 . + 0 ID=cds-WP_000030016.1;Parent=gene-AD12_RS04590;Dbxref=GenBank:WP_000030016.1;Name=WP_000030016.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708997.1;locus_tag=AD12_RS04590;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030016.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 266113 266688 . + . ID=gene-AD12_RS04585;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AD12_RS04585;old_locus_tag=AD12_3909 NZ_JJLK01000077.1 Protein Homology CDS 266113 266688 . + 0 ID=cds-WP_000030537.1;Parent=gene-AD12_RS04585;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AD12_RS04585;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 266657 267214 . + . ID=gene-AD12_RS04580;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AD12_RS04580;old_locus_tag=AD12_3910 NZ_JJLK01000077.1 Protein Homology CDS 266657 267214 . + 0 ID=cds-WP_000669785.1;Parent=gene-AD12_RS04580;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AD12_RS04580;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 267221 267946 . + . ID=gene-AD12_RS04575;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AD12_RS04575;old_locus_tag=AD12_3911 NZ_JJLK01000077.1 Protein Homology CDS 267221 267946 . + 0 ID=cds-WP_000224099.1;Parent=gene-AD12_RS04575;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AD12_RS04575;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 267994 269427 . + . ID=gene-AD12_RS04570;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AD12_RS04570;old_locus_tag=AD12_3912 NZ_JJLK01000077.1 Protein Homology CDS 267994 269427 . + 0 ID=cds-WP_000809051.1;Parent=gene-AD12_RS04570;Dbxref=GenBank:WP_000809051.1;Name=WP_000809051.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=AD12_RS04570;product=RNA polymerase factor sigma-54;protein_id=WP_000809051.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 269450 269737 . + . ID=gene-AD12_RS04565;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AD12_RS04565;old_locus_tag=AD12_3913 NZ_JJLK01000077.1 Protein Homology CDS 269450 269737 . + 0 ID=cds-WP_001176599.1;Parent=gene-AD12_RS04565;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AD12_RS04565;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 269855 270346 . + . ID=gene-AD12_RS04560;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AD12_RS04560;old_locus_tag=AD12_3914 NZ_JJLK01000077.1 Protein Homology CDS 269855 270346 . + 0 ID=cds-WP_000183676.1;Parent=gene-AD12_RS04560;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AD12_RS04560;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 270392 271246 . + . ID=gene-AD12_RS04555;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AD12_RS04555;old_locus_tag=AD12_3915 NZ_JJLK01000077.1 Protein Homology CDS 270392 271246 . + 0 ID=cds-WP_000243741.1;Parent=gene-AD12_RS04555;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AD12_RS04555;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 271243 271515 . + . ID=gene-AD12_RS0125065;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AD12_RS0125065;old_locus_tag=AD12_3916 NZ_JJLK01000077.1 Protein Homology CDS 271243 271515 . + 0 ID=cds-WP_000216791.1;Parent=gene-AD12_RS0125065;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AD12_RS0125065;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 271729 272361 . + . ID=gene-AD12_RS04550;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AD12_RS04550;old_locus_tag=AD12_3917 NZ_JJLK01000077.1 Protein Homology CDS 271729 272361 . + 0 ID=cds-WP_000620405.1;Parent=gene-AD12_RS04550;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AD12_RS04550;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 272358 273086 . - . ID=gene-AD12_RS04545;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AD12_RS04545;old_locus_tag=AD12_3918 NZ_JJLK01000077.1 Protein Homology CDS 272358 273086 . - 0 ID=cds-WP_000047091.1;Parent=gene-AD12_RS04545;Dbxref=GenBank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AD12_RS04545;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 273083 273736 . - . ID=gene-AD12_RS04540;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AD12_RS04540;old_locus_tag=AD12_3919 NZ_JJLK01000077.1 Protein Homology CDS 273083 273736 . - 0 ID=cds-WP_001299134.1;Parent=gene-AD12_RS04540;Dbxref=GenBank:WP_001299134.1;Name=WP_001299134.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AD12_RS04540;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001299134.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 273966 276302 . - . ID=gene-AD12_RS04535;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AD12_RS04535;old_locus_tag=AD12_3920 NZ_JJLK01000077.1 Protein Homology CDS 273966 276302 . - 0 ID=cds-WP_000809774.1;Parent=gene-AD12_RS04535;Dbxref=GenBank:WP_000809774.1;Name=WP_000809774.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AD12_RS04535;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809774.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 276398 277327 . - . ID=gene-AD12_RS04530;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AD12_RS04530;old_locus_tag=AD12_3921 NZ_JJLK01000077.1 Protein Homology CDS 276398 277327 . - 0 ID=cds-WP_001176896.1;Parent=gene-AD12_RS04530;Dbxref=GenBank:WP_001176896.1;Name=WP_001176896.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AD12_RS04530;product=TIGR01212 family radical SAM protein;protein_id=WP_001176896.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 278002 282462 . + . ID=gene-AD12_RS04525;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AD12_RS04525;old_locus_tag=AD12_3923 NZ_JJLK01000077.1 Protein Homology CDS 278002 282462 . + 0 ID=cds-WP_001364217.1;Parent=gene-AD12_RS04525;Dbxref=GenBank:WP_001364217.1;Name=WP_001364217.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AD12_RS04525;product=glutamate synthase large subunit;protein_id=WP_001364217.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 282475 283893 . + . ID=gene-AD12_RS04520;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AD12_RS04520;old_locus_tag=AD12_3924 NZ_JJLK01000077.1 Protein Homology CDS 282475 283893 . + 0 ID=cds-WP_000081674.1;Parent=gene-AD12_RS04520;Dbxref=GenBank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AD12_RS04520;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 284077 285204 . + . ID=gene-AD12_RS04515;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AD12_RS04515;old_locus_tag=AD12_3925 NZ_JJLK01000077.1 Protein Homology CDS 284077 285204 . + 0 ID=cds-WP_032286739.1;Parent=gene-AD12_RS04515;Dbxref=GenBank:WP_032286739.1;Name=WP_032286739.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312120.1;locus_tag=AD12_RS04515;product=PDDEXK nuclease domain-containing protein;protein_id=WP_032286739.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 285264 285728 . - . ID=gene-AD12_RS04510;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AD12_RS04510;old_locus_tag=AD12_3926 NZ_JJLK01000077.1 Protein Homology CDS 285264 285728 . - 0 ID=cds-WP_000979882.1;Parent=gene-AD12_RS04510;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AD12_RS04510;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 285725 286600 . - . ID=gene-AD12_RS04505;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AD12_RS04505;old_locus_tag=AD12_3927 NZ_JJLK01000077.1 Protein Homology CDS 285725 286600 . - 0 ID=cds-WP_000209025.1;Parent=gene-AD12_RS04505;Dbxref=GenBank:WP_000209025.1;Name=WP_000209025.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AD12_RS04505;product=N-acetylmannosamine kinase;protein_id=WP_000209025.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 286597 287286 . - . ID=gene-AD12_RS04500;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AD12_RS04500;old_locus_tag=AD12_3928 NZ_JJLK01000077.1 Protein Homology CDS 286597 287286 . - 0 ID=cds-WP_000054239.1;Parent=gene-AD12_RS04500;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AD12_RS04500;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 287334 288824 . - . ID=gene-AD12_RS04495;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AD12_RS04495;old_locus_tag=AD12_3929 NZ_JJLK01000077.1 Protein Homology CDS 287334 288824 . - 0 ID=cds-WP_000108473.1;Parent=gene-AD12_RS04495;Dbxref=GenBank:WP_000108473.1;Name=WP_000108473.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AD12_RS04495;product=sialic acid transporter NanT;protein_id=WP_000108473.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 288933 289826 . - . ID=gene-AD12_RS04490;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AD12_RS04490;old_locus_tag=AD12_3930 NZ_JJLK01000077.1 Protein Homology CDS 288933 289826 . - 0 ID=cds-WP_000224714.1;Parent=gene-AD12_RS04490;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AD12_RS04490;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 289948 290739 . - . ID=gene-AD12_RS04485;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AD12_RS04485;old_locus_tag=AD12_3931 NZ_JJLK01000077.1 Protein Homology CDS 289948 290739 . - 0 ID=cds-WP_000523845.1;Parent=gene-AD12_RS04485;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AD12_RS04485;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 291119 292486 . + . ID=gene-AD12_RS04480;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD12_RS04480;old_locus_tag=AD12_3932 NZ_JJLK01000077.1 Protein Homology CDS 291119 292486 . + 0 ID=cds-WP_000466989.1;Parent=gene-AD12_RS04480;Dbxref=GenBank:WP_000466989.1;Name=WP_000466989.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AD12_RS04480;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000466989.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 292529 293026 . - . ID=gene-AD12_RS04475;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AD12_RS04475;old_locus_tag=AD12_3933 NZ_JJLK01000077.1 Protein Homology CDS 292529 293026 . - 0 ID=cds-WP_000366129.1;Parent=gene-AD12_RS04475;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AD12_RS04475;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 293032 293670 . - . ID=gene-AD12_RS04470;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AD12_RS04470;old_locus_tag=AD12_3934 NZ_JJLK01000077.1 Protein Homology CDS 293032 293670 . - 0 ID=cds-WP_000257293.1;Parent=gene-AD12_RS04470;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AD12_RS04470;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 294065 294457 . - . ID=gene-AD12_RS04465;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AD12_RS04465;old_locus_tag=AD12_3935 NZ_JJLK01000077.1 Protein Homology CDS 294065 294457 . - 0 ID=cds-WP_000829818.1;Parent=gene-AD12_RS04465;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AD12_RS04465;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 294473 294901 . - . ID=gene-AD12_RS04460;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AD12_RS04460;old_locus_tag=AD12_3936 NZ_JJLK01000077.1 Protein Homology CDS 294473 294901 . - 0 ID=cds-WP_000847559.1;Parent=gene-AD12_RS04460;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AD12_RS04460;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 295120 296247 . - . ID=gene-AD12_RS04455;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AD12_RS04455;old_locus_tag=AD12_3937 NZ_JJLK01000077.1 Protein Homology CDS 295120 296247 . - 0 ID=cds-WP_001192353.1;Parent=gene-AD12_RS04455;Dbxref=GenBank:WP_001192353.1;Name=WP_001192353.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AD12_RS04455;product=cell division protein ZapE;protein_id=WP_001192353.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 296441 296839 . + . ID=gene-AD12_RS04450;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AD12_RS04450;old_locus_tag=AD12_3938 NZ_JJLK01000077.1 Protein Homology CDS 296441 296839 . + 0 ID=cds-WP_001295270.1;Parent=gene-AD12_RS04450;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AD12_RS04450;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 296993 298360 . + . ID=gene-AD12_RS04445;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AD12_RS04445;old_locus_tag=AD12_3939 NZ_JJLK01000077.1 Protein Homology CDS 296993 298360 . + 0 ID=cds-WP_001295271.1;Parent=gene-AD12_RS04445;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AD12_RS04445;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 298450 299517 . + . ID=gene-AD12_RS04440;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AD12_RS04440;old_locus_tag=AD12_3940 NZ_JJLK01000077.1 Protein Homology CDS 298450 299517 . + 0 ID=cds-WP_000497723.1;Parent=gene-AD12_RS04440;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AD12_RS04440;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 299579 300517 . - . ID=gene-AD12_RS04435;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AD12_RS04435;old_locus_tag=AD12_3941 NZ_JJLK01000077.1 Protein Homology CDS 299579 300517 . - 0 ID=cds-WP_032163809.1;Parent=gene-AD12_RS04435;Dbxref=GenBank:WP_032163809.1;Name=WP_032163809.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AD12_RS04435;product=malate dehydrogenase;protein_id=WP_032163809.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 300952 301422 . + . ID=gene-AD12_RS04430;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AD12_RS04430;old_locus_tag=AD12_3942 NZ_JJLK01000077.1 Protein Homology CDS 300952 301422 . + 0 ID=cds-WP_001257846.1;Parent=gene-AD12_RS04430;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AD12_RS04430;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 301787 302050 . + . ID=gene-AD12_RS04425;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AD12_RS04425;old_locus_tag=AD12_3943 NZ_JJLK01000077.1 Protein Homology CDS 301787 302050 . + 0 ID=cds-WP_000695688.1;Parent=gene-AD12_RS04425;Dbxref=GenBank:WP_000695688.1;Name=WP_000695688.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AD12_RS04425;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695688.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 302106 302378 . - . ID=gene-AD12_RS04420;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AD12_RS04420;old_locus_tag=AD12_3944 NZ_JJLK01000077.1 Protein Homology CDS 302106 302378 . - 0 ID=cds-WP_001029005.1;Parent=gene-AD12_RS04420;Dbxref=GenBank:WP_001029005.1;Name=WP_001029005.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AD12_RS04420;product=barstar family protein;protein_id=WP_001029005.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 302470 304437 . - . ID=gene-AD12_RS04415;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AD12_RS04415;old_locus_tag=AD12_3945 NZ_JJLK01000077.1 Protein Homology CDS 302470 304437 . - 0 ID=cds-WP_000510962.1;Parent=gene-AD12_RS04415;Dbxref=GenBank:WP_000510962.1;Name=WP_000510962.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AD12_RS04415;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510962.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 304443 305375 . - . ID=gene-AD12_RS04410;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AD12_RS04410;old_locus_tag=AD12_3946 NZ_JJLK01000077.1 Protein Homology CDS 304443 305375 . - 0 ID=cds-WP_000854021.1;Parent=gene-AD12_RS04410;Dbxref=GenBank:WP_000854021.1;Name=WP_000854021.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AD12_RS04410;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 305383 305586 . - . ID=gene-AD12_RS04405;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AD12_RS04405;old_locus_tag=AD12_3947 NZ_JJLK01000077.1 Protein Homology CDS 305383 305586 . - 0 ID=cds-WP_000051841.1;Parent=gene-AD12_RS04405;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AD12_RS04405;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 305769 306698 . + . ID=gene-AD12_RS04400;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AD12_RS04400;old_locus_tag=AD12_3948 NZ_JJLK01000077.1 Protein Homology CDS 305769 306698 . + 0 ID=cds-WP_000440317.1;Parent=gene-AD12_RS04400;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AD12_RS04400;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 306826 308271 . - . ID=gene-AD12_RS04395;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AD12_RS04395;old_locus_tag=AD12_3949 NZ_JJLK01000077.1 Protein Homology CDS 306826 308271 . - 0 ID=cds-WP_000055909.1;Parent=gene-AD12_RS04395;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AD12_RS04395;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 308427 312227 . - . ID=gene-AD12_RS04390;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AD12_RS04390;old_locus_tag=AD12_3950 NZ_JJLK01000077.1 Protein Homology CDS 308427 312227 . - 0 ID=cds-WP_001253572.1;Parent=gene-AD12_RS04390;Dbxref=GenBank:WP_001253572.1;Name=WP_001253572.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AD12_RS04390;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253572.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 312295 313764 . - . ID=gene-AD12_RS04385;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AD12_RS04385;old_locus_tag=AD12_3951 NZ_JJLK01000077.1 Protein Homology CDS 312295 313764 . - 0 ID=cds-WP_000123197.1;Parent=gene-AD12_RS04385;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AD12_RS04385;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 313754 314347 . - . ID=gene-AD12_RS04380;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AD12_RS04380;old_locus_tag=AD12_3952 NZ_JJLK01000077.1 Protein Homology CDS 313754 314347 . - 0 ID=cds-WP_000203096.1;Parent=gene-AD12_RS04380;Dbxref=GenBank:WP_000203096.1;Name=WP_000203096.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=AD12_RS04380;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203096.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 314356 314844 . - . ID=gene-AD12_RS04375;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AD12_RS04375;old_locus_tag=AD12_3953 NZ_JJLK01000077.1 Protein Homology CDS 314356 314844 . - 0 ID=cds-WP_000179409.1;Parent=gene-AD12_RS04375;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AD12_RS04375;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 314844 315947 . - . ID=gene-AD12_RS04370;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AD12_RS04370;old_locus_tag=AD12_3954 NZ_JJLK01000077.1 Protein Homology CDS 314844 315947 . - 0 ID=cds-WP_000802516.1;Parent=gene-AD12_RS04370;Dbxref=GenBank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=AD12_RS04370;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 316013 317056 . - . ID=gene-AD12_RS04365;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AD12_RS04365;old_locus_tag=AD12_3955 NZ_JJLK01000077.1 Protein Homology CDS 316013 317056 . - 0 ID=cds-WP_000913396.1;Parent=gene-AD12_RS04365;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AD12_RS04365;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 317361 319301 . - . ID=gene-AD12_RS04360;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AD12_RS04360;old_locus_tag=AD12_3956 NZ_JJLK01000077.1 Protein Homology CDS 317361 319301 . - 0 ID=cds-WP_001241436.1;Parent=gene-AD12_RS04360;Dbxref=GenBank:WP_001241436.1;Name=WP_001241436.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AD12_RS04360;product=RNase E specificity factor CsrD;protein_id=WP_001241436.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 319453 320427 . + . ID=gene-AD12_RS04355;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AD12_RS04355;old_locus_tag=AD12_3957 NZ_JJLK01000077.1 Protein Homology CDS 319453 320427 . + 0 ID=cds-WP_001148478.1;Parent=gene-AD12_RS04355;Dbxref=GenBank:WP_001148478.1;Name=WP_001148478.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=AD12_RS04355;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148478.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 321405 321875 . + . ID=gene-AD12_RS04345;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AD12_RS04345;old_locus_tag=AD12_3959 NZ_JJLK01000077.1 Protein Homology CDS 321405 321875 . + 0 ID=cds-WP_000354622.1;Parent=gene-AD12_RS04345;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AD12_RS04345;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 321886 323235 . + . ID=gene-AD12_RS04340;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AD12_RS04340;old_locus_tag=AD12_3960 NZ_JJLK01000077.1 Protein Homology CDS 321886 323235 . + 0 ID=cds-WP_000884639.1;Parent=gene-AD12_RS04340;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AD12_RS04340;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 323344 323586 . + . ID=gene-AD12_RS04335;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AD12_RS04335;old_locus_tag=AD12_3961 NZ_JJLK01000077.1 Protein Homology CDS 323344 323586 . + 0 ID=cds-WP_000381170.1;Parent=gene-AD12_RS04335;Dbxref=GenBank:WP_000381170.1;Name=WP_000381170.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312156.1;locus_tag=AD12_RS04335;product=YhdT family protein;protein_id=WP_000381170.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 323576 325027 . + . ID=gene-AD12_RS04330;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AD12_RS04330;old_locus_tag=AD12_3962 NZ_JJLK01000077.1 Protein Homology CDS 323576 325027 . + 0 ID=cds-WP_001175731.1;Parent=gene-AD12_RS04330;Dbxref=GenBank:WP_001175731.1;Name=WP_001175731.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AD12_RS04330;product=sodium/pantothenate symporter;protein_id=WP_001175731.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 325039 325920 . + . ID=gene-AD12_RS04325;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AD12_RS04325;old_locus_tag=AD12_3963 NZ_JJLK01000077.1 Protein Homology CDS 325039 325920 . + 0 ID=cds-WP_001145828.1;Parent=gene-AD12_RS04325;Dbxref=GenBank:WP_001145828.1;Name=WP_001145828.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AD12_RS04325;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145828.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 326249 327214 . + . ID=gene-AD12_RS04320;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AD12_RS04320;old_locus_tag=AD12_3964 NZ_JJLK01000077.1 Protein Homology CDS 326249 327214 . + 0 ID=cds-WP_001219652.1;Parent=gene-AD12_RS04320;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AD12_RS04320;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 327240 327536 . + . ID=gene-AD12_RS04315;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AD12_RS04315;old_locus_tag=AD12_3965 NZ_JJLK01000077.1 Protein Homology CDS 327240 327536 . + 0 ID=cds-WP_000462905.1;Parent=gene-AD12_RS04315;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AD12_RS04315;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 327622 328506 . + . ID=gene-AD12_RS04310;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AD12_RS04310;old_locus_tag=AD12_3966 NZ_JJLK01000077.1 Protein Homology CDS 327622 328506 . + 0 ID=cds-WP_001258917.1;Parent=gene-AD12_RS04310;Dbxref=GenBank:WP_001258917.1;Name=WP_001258917.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312161.2;locus_tag=AD12_RS04310;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258917.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 328590 328769 . + . ID=gene-AD12_RS0125085;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AD12_RS0125085 NZ_JJLK01000077.1 Protein Homology CDS 328590 328769 . + 0 ID=cds-WP_001295275.1;Parent=gene-AD12_RS0125085;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AD12_RS0125085;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 328772 329434 . - . ID=gene-AD12_RS04305;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AD12_RS04305;old_locus_tag=AD12_3968 NZ_JJLK01000077.1 Protein Homology CDS 328772 329434 . - 0 ID=cds-WP_001129518.1;Parent=gene-AD12_RS04305;Dbxref=GenBank:WP_001129518.1;Name=WP_001129518.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AD12_RS04305;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001129518.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 329833 330990 . + . ID=gene-AD12_RS04300;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AD12_RS04300;old_locus_tag=AD12_3969 NZ_JJLK01000077.1 Protein Homology CDS 329833 330990 . + 0 ID=cds-WP_000160334.1;Parent=gene-AD12_RS04300;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AD12_RS04300;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 331002 334106 . + . ID=gene-AD12_RS04295;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AD12_RS04295;old_locus_tag=AD12_3970 NZ_JJLK01000077.1 Protein Homology CDS 331002 334106 . + 0 ID=cds-WP_001273218.1;Parent=gene-AD12_RS04295;Dbxref=GenBank:WP_001273218.1;Name=WP_001273218.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AD12_RS04295;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_001273218.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 334359 334580 . + . ID=gene-AD12_RS04290;Name=AD12_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04290;old_locus_tag=AD12_3971 NZ_JJLK01000077.1 Protein Homology CDS 334359 334580 . + 0 ID=cds-WP_000825639.1;Parent=gene-AD12_RS04290;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AD12_RS04290;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 335011 336036 . + . ID=gene-AD12_RS04285;Name=AD12_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04285;old_locus_tag=AD12_3973 NZ_JJLK01000077.1 Protein Homology CDS 335011 336036 . + 0 ID=cds-WP_000738579.1;Parent=gene-AD12_RS04285;Dbxref=GenBank:WP_000738579.1;Name=WP_000738579.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AD12_RS04285;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738579.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 336104 337285 . + . ID=gene-AD12_RS04280;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AD12_RS04280;old_locus_tag=AD12_3974 NZ_JJLK01000077.1 Protein Homology CDS 336104 337285 . + 0 ID=cds-WP_000019655.1;Parent=gene-AD12_RS04280;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AD12_RS04280;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 337295 338398 . + . ID=gene-AD12_RS04275;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AD12_RS04275;old_locus_tag=AD12_3975 NZ_JJLK01000077.1 Protein Homology CDS 337295 338398 . + 0 ID=cds-WP_001297685.1;Parent=gene-AD12_RS04275;Dbxref=GenBank:WP_001297685.1;Name=WP_001297685.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709065.2;locus_tag=AD12_RS04275;product=amino acid ABC transporter permease;protein_id=WP_001297685.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 338406 339164 . + . ID=gene-AD12_RS04270;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AD12_RS04270;old_locus_tag=AD12_3976 NZ_JJLK01000077.1 Protein Homology CDS 338406 339164 . + 0 ID=cds-WP_000078339.1;Parent=gene-AD12_RS04270;Dbxref=GenBank:WP_000078339.1;Name=WP_000078339.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312171.1;locus_tag=AD12_RS04270;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078339.1;transl_table=11 NZ_JJLK01000077.1 RefSeq gene 339396 339511 . - . ID=gene-AD12_RS04265;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS04265;old_locus_tag=AD12_3977 NZ_JJLK01000077.1 cmsearch rRNA 339396 339511 . - . ID=rna-AD12_RS04265;Parent=gene-AD12_RS04265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04265;product=5S ribosomal RNA NZ_JJLK01000077.1 cmsearch exon 339396 339511 . - . ID=exon-AD12_RS04265-1;Parent=rna-AD12_RS04265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04265;product=5S ribosomal RNA NZ_JJLK01000077.1 RefSeq gene 339551 339626 . - . ID=gene-AD12_RS04260;Name=AD12_RS04260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS04260;old_locus_tag=AD12_3978 NZ_JJLK01000077.1 tRNAscan-SE tRNA 339551 339626 . - . ID=rna-AD12_RS04260;Parent=gene-AD12_RS04260;anticodon=(pos:complement(339591..339593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04260;product=tRNA-Thr NZ_JJLK01000077.1 tRNAscan-SE exon 339551 339626 . - . ID=exon-AD12_RS04260-1;Parent=rna-AD12_RS04260;anticodon=(pos:complement(339591..339593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04260;product=tRNA-Thr NZ_JJLK01000077.1 RefSeq gene 339641 339756 . - . ID=gene-AD12_RS04255;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS04255;old_locus_tag=AD12_3979 NZ_JJLK01000077.1 cmsearch rRNA 339641 339756 . - . ID=rna-AD12_RS04255;Parent=gene-AD12_RS04255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04255;product=5S ribosomal RNA NZ_JJLK01000077.1 cmsearch exon 339641 339756 . - . ID=exon-AD12_RS04255-1;Parent=rna-AD12_RS04255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04255;product=5S ribosomal RNA NZ_JJLK01000077.1 RefSeq gene 339796 339871 . - . ID=gene-AD12_RS04250;Name=AD12_RS04250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS04250;old_locus_tag=AD12_3980 NZ_JJLK01000077.1 tRNAscan-SE tRNA 339796 339871 . - . ID=rna-AD12_RS04250;Parent=gene-AD12_RS04250;anticodon=(pos:complement(339836..339838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04250;product=tRNA-Thr NZ_JJLK01000077.1 tRNAscan-SE exon 339796 339871 . - . ID=exon-AD12_RS04250-1;Parent=rna-AD12_RS04250;anticodon=(pos:complement(339836..339838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS04250;product=tRNA-Thr NZ_JJLK01000077.1 RefSeq gene 339886 340001 . - . ID=gene-AD12_RS04245;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS04245;old_locus_tag=AD12_3981 NZ_JJLK01000077.1 cmsearch rRNA 339886 340001 . - . ID=rna-AD12_RS04245;Parent=gene-AD12_RS04245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04245;product=5S ribosomal RNA NZ_JJLK01000077.1 cmsearch exon 339886 340001 . - . ID=exon-AD12_RS04245-1;Parent=rna-AD12_RS04245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04245;product=5S ribosomal RNA NZ_JJLK01000077.1 RefSeq gene 340097 340309 . - . ID=gene-AD12_RS0125095;Name=AD12_RS0125095;end_range=340309,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0125095;partial=true NZ_JJLK01000077.1 cmsearch rRNA 340097 340309 . - . ID=rna-AD12_RS0125095;Parent=gene-AD12_RS0125095;Dbxref=RFAM:RF02541;end_range=340309,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125095;partial=true;product=23S ribosomal RNA NZ_JJLK01000077.1 cmsearch exon 340097 340309 . - . ID=exon-AD12_RS0125095-1;Parent=rna-AD12_RS0125095;Dbxref=RFAM:RF02541;end_range=340309,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125095;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLK01000078.1 1 1245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000078.1 RefSeq region 1 1245 . + . ID=NZ_JJLK01000078.1:1..1245;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000078.1 RefSeq gene 95 1245 . - . ID=gene-AD12_RS04240;Name=AD12_RS04240;end_range=1245,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS04240;old_locus_tag=AD12_3982;partial=true NZ_JJLK01000078.1 cmsearch rRNA 95 1245 . - . ID=rna-AD12_RS04240;Parent=gene-AD12_RS04240;Dbxref=RFAM:RF02541;end_range=1245,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04240;partial=true;product=23S ribosomal RNA NZ_JJLK01000078.1 cmsearch exon 95 1245 . - . ID=exon-AD12_RS04240-1;Parent=rna-AD12_RS04240;Dbxref=RFAM:RF02541;end_range=1245,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS04240;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLK01000079.1 1 42024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000079.1 RefSeq region 1 42024 . + . ID=NZ_JJLK01000079.1:1..42024;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000079.1 RefSeq gene 1 342 . - . ID=gene-AD12_RS0125115;Name=AD12_RS0125115;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0125115;partial=true;start_range=.,1 NZ_JJLK01000079.1 cmsearch rRNA 1 342 . - . ID=rna-AD12_RS0125115;Parent=gene-AD12_RS0125115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125115;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLK01000079.1 cmsearch exon 1 342 . - . ID=exon-AD12_RS0125115-1;Parent=rna-AD12_RS0125115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125115;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLK01000079.1 RefSeq gene 815 1369 . + . ID=gene-AD12_RS04235;Name=AD12_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04235;old_locus_tag=AD12_3984 NZ_JJLK01000079.1 Protein Homology CDS 815 1369 . + 0 ID=cds-WP_001286216.1;Parent=gene-AD12_RS04235;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AD12_RS04235;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 1345 1602 . - . ID=gene-AD12_RS0125120;Name=AD12_RS0125120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125120;old_locus_tag=AD12_3985 NZ_JJLK01000079.1 Protein Homology CDS 1345 1602 . - 0 ID=cds-WP_001070563.1;Parent=gene-AD12_RS0125120;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AD12_RS0125120;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 1599 2417 . - . ID=gene-AD12_RS04230;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AD12_RS04230;old_locus_tag=AD12_3986 NZ_JJLK01000079.1 Protein Homology CDS 1599 2417 . - 0 ID=cds-WP_000451239.1;Parent=gene-AD12_RS04230;Dbxref=GenBank:WP_000451239.1;Name=WP_000451239.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AD12_RS04230;product=shikimate dehydrogenase;protein_id=WP_000451239.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 2422 2994 . - . ID=gene-AD12_RS04225;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AD12_RS04225;old_locus_tag=AD12_3987 NZ_JJLK01000079.1 Protein Homology CDS 2422 2994 . - 0 ID=cds-WP_001297709.1;Parent=gene-AD12_RS04225;Dbxref=GenBank:WP_001297709.1;Name=WP_001297709.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312175.1;locus_tag=AD12_RS04225;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001297709.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 2999 3541 . - . ID=gene-AD12_RS0125125;Name=AD12_RS0125125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125125 NZ_JJLK01000079.1 Protein Homology CDS 2999 3541 . - 0 ID=cds-WP_001129719.1;Parent=gene-AD12_RS0125125;Dbxref=GenBank:WP_001129719.1;Name=WP_001129719.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AD12_RS0125125;product=DNA topoisomerase family protein;protein_id=WP_001129719.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 3570 4043 . - . ID=gene-AD12_RS04220;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AD12_RS04220;old_locus_tag=AD12_3989 NZ_JJLK01000079.1 Protein Homology CDS 3570 4043 . - 0 ID=cds-WP_000460672.1;Parent=gene-AD12_RS04220;Dbxref=GenBank:WP_000460672.1;Name=WP_000460672.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AD12_RS04220;product=DUF494 family protein Smg;protein_id=WP_000460672.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 4015 5139 . - . ID=gene-AD12_RS04215;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AD12_RS04215;old_locus_tag=AD12_3990 NZ_JJLK01000079.1 Protein Homology CDS 4015 5139 . - 0 ID=cds-WP_000228507.1;Parent=gene-AD12_RS04215;Dbxref=GenBank:WP_000228507.1;Name=WP_000228507.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AD12_RS04215;product=DNA-protecting protein DprA;protein_id=WP_000228507.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 5269 5778 . + . ID=gene-AD12_RS04210;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AD12_RS04210;old_locus_tag=AD12_3991 NZ_JJLK01000079.1 Protein Homology CDS 5269 5778 . + 0 ID=cds-WP_000114984.1;Parent=gene-AD12_RS04210;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AD12_RS04210;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 5793 6740 . + . ID=gene-AD12_RS04205;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AD12_RS04205;old_locus_tag=AD12_3992 NZ_JJLK01000079.1 Protein Homology CDS 5793 6740 . + 0 ID=cds-WP_000004454.1;Parent=gene-AD12_RS04205;Dbxref=GenBank:WP_000004454.1;Name=WP_000004454.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=AD12_RS04205;product=methionyl-tRNA formyltransferase;protein_id=WP_000004454.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 6786 8075 . + . ID=gene-AD12_RS04200;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AD12_RS04200;old_locus_tag=AD12_3993 NZ_JJLK01000079.1 Protein Homology CDS 6786 8075 . + 0 ID=cds-WP_001323790.1;Parent=gene-AD12_RS04200;Dbxref=GenBank:WP_001323790.1;Name=WP_001323790.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AD12_RS04200;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_001323790.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 8097 9473 . + . ID=gene-AD12_RS04195;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AD12_RS04195;old_locus_tag=AD12_3994 NZ_JJLK01000079.1 Protein Homology CDS 8097 9473 . + 0 ID=cds-WP_000691382.1;Parent=gene-AD12_RS04195;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AD12_RS04195;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 9603 10013 . + . ID=gene-AD12_RS04190;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AD12_RS04190;old_locus_tag=AD12_3995 NZ_JJLK01000079.1 Protein Homology CDS 9603 10013 . + 0 ID=cds-WP_000022442.1;Parent=gene-AD12_RS04190;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AD12_RS04190;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 10010 10228 . - . ID=gene-AD12_RS0125130;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AD12_RS0125130 NZ_JJLK01000079.1 Protein Homology CDS 10010 10228 . - 0 ID=cds-WP_000092699.1;Parent=gene-AD12_RS0125130;Dbxref=GenBank:WP_000092699.1;Name=WP_000092699.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AD12_RS0125130;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092699.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 10284 10709 . - . ID=gene-AD12_RS04185;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AD12_RS04185;old_locus_tag=AD12_3996 NZ_JJLK01000079.1 Protein Homology CDS 10284 10709 . - 0 ID=cds-WP_000285607.1;Parent=gene-AD12_RS04185;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AD12_RS04185;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 10720 11088 . - . ID=gene-AD12_RS04180;Name=AD12_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04180;old_locus_tag=AD12_3997 NZ_JJLK01000079.1 Protein Homology CDS 10720 11088 . - 0 ID=cds-WP_000266492.1;Parent=gene-AD12_RS04180;Dbxref=GenBank:WP_000266492.1;Name=WP_000266492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AD12_RS04180;product=DUF1992 domain-containing protein;protein_id=WP_000266492.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 11195 11578 . - . ID=gene-AD12_RS04175;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AD12_RS04175;old_locus_tag=AD12_3998 NZ_JJLK01000079.1 Protein Homology CDS 11195 11578 . - 0 ID=cds-WP_001216368.1;Parent=gene-AD12_RS04175;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AD12_RS04175;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 11619 12608 . - . ID=gene-AD12_RS04170;Name=AD12_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS04170;old_locus_tag=AD12_3999 NZ_JJLK01000079.1 Protein Homology CDS 11619 12608 . - 0 ID=cds-WP_001162094.1;Parent=gene-AD12_RS04170;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AD12_RS04170;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 12634 13254 . - . ID=gene-AD12_RS04165;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AD12_RS04165;old_locus_tag=AD12_4000 NZ_JJLK01000079.1 Protein Homology CDS 12634 13254 . - 0 ID=cds-WP_000135224.1;Parent=gene-AD12_RS04165;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AD12_RS04165;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 13288 13677 . - . ID=gene-AD12_RS04160;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AD12_RS04160;old_locus_tag=AD12_4001 NZ_JJLK01000079.1 Protein Homology CDS 13288 13677 . - 0 ID=cds-WP_001029684.1;Parent=gene-AD12_RS04160;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AD12_RS04160;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 13694 14050 . - . ID=gene-AD12_RS04155;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AD12_RS04155;old_locus_tag=AD12_4002 NZ_JJLK01000079.1 Protein Homology CDS 13694 14050 . - 0 ID=cds-WP_000090775.1;Parent=gene-AD12_RS04155;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AD12_RS04155;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 14197 14313 . - . ID=gene-AD12_RS04150;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AD12_RS04150;old_locus_tag=AD12_4003 NZ_JJLK01000079.1 Protein Homology CDS 14197 14313 . - 0 ID=cds-WP_000868187.1;Parent=gene-AD12_RS04150;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AD12_RS04150;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 14345 15676 . - . ID=gene-AD12_RS04145;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AD12_RS04145;old_locus_tag=AD12_4004 NZ_JJLK01000079.1 Protein Homology CDS 14345 15676 . - 0 ID=cds-WP_001118861.1;Parent=gene-AD12_RS04145;Dbxref=GenBank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AD12_RS04145;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 15684 16118 . - . ID=gene-AD12_RS04140;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AD12_RS04140;old_locus_tag=AD12_4005 NZ_JJLK01000079.1 Protein Homology CDS 15684 16118 . - 0 ID=cds-WP_001238917.1;Parent=gene-AD12_RS04140;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AD12_RS04140;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 16122 16301 . - . ID=gene-AD12_RS04135;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AD12_RS04135;old_locus_tag=AD12_4006 NZ_JJLK01000079.1 Protein Homology CDS 16122 16301 . - 0 ID=cds-WP_001140433.1;Parent=gene-AD12_RS04135;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AD12_RS04135;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 16305 16808 . - . ID=gene-AD12_RS04130;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AD12_RS04130;old_locus_tag=AD12_4007 NZ_JJLK01000079.1 Protein Homology CDS 16305 16808 . - 0 ID=cds-WP_000940121.1;Parent=gene-AD12_RS04130;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AD12_RS04130;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 16823 17176 . - . ID=gene-AD12_RS04125;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AD12_RS04125;old_locus_tag=AD12_4008 NZ_JJLK01000079.1 Protein Homology CDS 16823 17176 . - 0 ID=cds-WP_000358960.1;Parent=gene-AD12_RS04125;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AD12_RS04125;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 17186 17719 . - . ID=gene-AD12_RS04120;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AD12_RS04120;old_locus_tag=AD12_4009 NZ_JJLK01000079.1 Protein Homology CDS 17186 17719 . - 0 ID=cds-WP_000091945.1;Parent=gene-AD12_RS04120;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AD12_RS04120;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 17732 18124 . - . ID=gene-AD12_RS04115;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AD12_RS04115;old_locus_tag=AD12_4010 NZ_JJLK01000079.1 Protein Homology CDS 17732 18124 . - 0 ID=cds-WP_000062611.1;Parent=gene-AD12_RS04115;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AD12_RS04115;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 18158 18463 . - . ID=gene-AD12_RS04110;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AD12_RS04110;old_locus_tag=AD12_4011 NZ_JJLK01000079.1 Protein Homology CDS 18158 18463 . - 0 ID=cds-WP_001118930.1;Parent=gene-AD12_RS04110;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AD12_RS04110;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 18478 19017 . - . ID=gene-AD12_RS04105;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AD12_RS04105;old_locus_tag=AD12_4012 NZ_JJLK01000079.1 Protein Homology CDS 18478 19017 . - 0 ID=cds-WP_001096200.1;Parent=gene-AD12_RS04105;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AD12_RS04105;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 19032 19346 . - . ID=gene-AD12_RS04100;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AD12_RS04100;old_locus_tag=AD12_4013 NZ_JJLK01000079.1 Protein Homology CDS 19032 19346 . - 0 ID=cds-WP_000729185.1;Parent=gene-AD12_RS04100;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AD12_RS04100;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 19357 19728 . - . ID=gene-AD12_RS04095;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AD12_RS04095;old_locus_tag=AD12_4014 NZ_JJLK01000079.1 Protein Homology CDS 19357 19728 . - 0 ID=cds-WP_000613955.1;Parent=gene-AD12_RS04095;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AD12_RS04095;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 19893 20147 . - . ID=gene-AD12_RS04090;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AD12_RS04090;old_locus_tag=AD12_4015 NZ_JJLK01000079.1 Protein Homology CDS 19893 20147 . - 0 ID=cds-WP_000130100.1;Parent=gene-AD12_RS04090;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AD12_RS04090;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 20147 20338 . - . ID=gene-AD12_RS04085;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AD12_RS04085;old_locus_tag=AD12_4016 NZ_JJLK01000079.1 Protein Homology CDS 20147 20338 . - 0 ID=cds-WP_000644741.1;Parent=gene-AD12_RS04085;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AD12_RS04085;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 20338 20748 . - . ID=gene-AD12_RS04080;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AD12_RS04080;old_locus_tag=AD12_4017 NZ_JJLK01000079.1 Protein Homology CDS 20338 20748 . - 0 ID=cds-WP_000941212.1;Parent=gene-AD12_RS04080;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AD12_RS04080;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 20761 21462 . - . ID=gene-AD12_RS04075;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AD12_RS04075;old_locus_tag=AD12_4018 NZ_JJLK01000079.1 Protein Homology CDS 20761 21462 . - 0 ID=cds-WP_000529945.1;Parent=gene-AD12_RS04075;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AD12_RS04075;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 21480 21812 . - . ID=gene-AD12_RS04070;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AD12_RS04070;old_locus_tag=AD12_4019 NZ_JJLK01000079.1 Protein Homology CDS 21480 21812 . - 0 ID=cds-WP_000447529.1;Parent=gene-AD12_RS04070;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AD12_RS04070;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 21827 22105 . - . ID=gene-AD12_RS0125135;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AD12_RS0125135 NZ_JJLK01000079.1 Protein Homology CDS 21827 22105 . - 0 ID=cds-WP_001138117.1;Parent=gene-AD12_RS0125135;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AD12_RS0125135;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 22122 22943 . - . ID=gene-AD12_RS04065;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AD12_RS04065;old_locus_tag=AD12_4021 NZ_JJLK01000079.1 Protein Homology CDS 22122 22943 . - 0 ID=cds-WP_000301864.1;Parent=gene-AD12_RS04065;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AD12_RS04065;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 22961 23263 . - . ID=gene-AD12_RS04060;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AD12_RS04060;old_locus_tag=AD12_4022 NZ_JJLK01000079.1 Protein Homology CDS 22961 23263 . - 0 ID=cds-WP_000617544.1;Parent=gene-AD12_RS04060;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AD12_RS04060;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 23260 23865 . - . ID=gene-AD12_RS04055;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AD12_RS04055;old_locus_tag=AD12_4023 NZ_JJLK01000079.1 Protein Homology CDS 23260 23865 . - 0 ID=cds-WP_000424395.1;Parent=gene-AD12_RS04055;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AD12_RS04055;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 23876 24505 . - . ID=gene-AD12_RS04050;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AD12_RS04050;old_locus_tag=AD12_4024 NZ_JJLK01000079.1 Protein Homology CDS 23876 24505 . - 0 ID=cds-WP_000579833.1;Parent=gene-AD12_RS04050;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AD12_RS04050;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 24538 24849 . - . ID=gene-AD12_RS04045;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AD12_RS04045;old_locus_tag=AD12_4025 NZ_JJLK01000079.1 Protein Homology CDS 24538 24849 . - 0 ID=cds-WP_001181004.1;Parent=gene-AD12_RS04045;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AD12_RS04045;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 25087 25506 . - . ID=gene-AD12_RS04040;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AD12_RS04040;old_locus_tag=AD12_4026 NZ_JJLK01000079.1 Protein Homology CDS 25087 25506 . - 0 ID=cds-WP_000461449.1;Parent=gene-AD12_RS04040;Dbxref=GenBank:WP_000461449.1;Name=WP_000461449.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AD12_RS04040;product=putative general secretion pathway protein GspB;protein_id=WP_000461449.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 25508 26977 . - . ID=gene-AD12_RS04035;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AD12_RS04035;old_locus_tag=AD12_4027 NZ_JJLK01000079.1 Protein Homology CDS 25508 26977 . - 0 ID=cds-WP_000107576.1;Parent=gene-AD12_RS04035;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AD12_RS04035;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 27157 27972 . + . ID=gene-AD12_RS04030;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AD12_RS04030;old_locus_tag=AD12_4028 NZ_JJLK01000079.1 Protein Homology CDS 27157 27972 . + 0 ID=cds-WP_001142708.1;Parent=gene-AD12_RS04030;Dbxref=GenBank:WP_001142708.1;Name=WP_001142708.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AD12_RS04030;product=type II secretion system protein GspC;protein_id=WP_001142708.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 27956 29908 . + . ID=gene-AD12_RS04025;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD12_RS04025;old_locus_tag=AD12_4029 NZ_JJLK01000079.1 Protein Homology CDS 27956 29908 . + 0 ID=cds-WP_001393111.1;Parent=gene-AD12_RS04025;Dbxref=GenBank:WP_001393111.1;Name=WP_001393111.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AD12_RS04025;product=type II secretion system secretin GspD;protein_id=WP_001393111.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 29918 31399 . + . ID=gene-AD12_RS04020;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD12_RS04020;old_locus_tag=AD12_4030 NZ_JJLK01000079.1 Protein Homology CDS 29918 31399 . + 0 ID=cds-WP_001219897.1;Parent=gene-AD12_RS04020;Dbxref=GenBank:WP_001219897.1;Name=WP_001219897.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AD12_RS04020;product=type II secretion system ATPase GspE;protein_id=WP_001219897.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 31396 32592 . + . ID=gene-AD12_RS04015;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AD12_RS04015;old_locus_tag=AD12_4031 NZ_JJLK01000079.1 Protein Homology CDS 31396 32592 . + 0 ID=cds-WP_001109573.1;Parent=gene-AD12_RS04015;Dbxref=GenBank:WP_001109573.1;Name=WP_001109573.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AD12_RS04015;product=type II secretion system inner membrane protein GspF;protein_id=WP_001109573.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 32602 33039 . + . ID=gene-AD12_RS04010;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD12_RS04010;old_locus_tag=AD12_4032 NZ_JJLK01000079.1 Protein Homology CDS 32602 33039 . + 0 ID=cds-WP_001202880.1;Parent=gene-AD12_RS04010;Dbxref=GenBank:WP_001202880.1;Name=WP_001202880.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AD12_RS04010;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202880.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 33047 33556 . + . ID=gene-AD12_RS04005;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AD12_RS04005;old_locus_tag=AD12_4033 NZ_JJLK01000079.1 Protein Homology CDS 33047 33556 . + 0 ID=cds-WP_001076048.1;Parent=gene-AD12_RS04005;Dbxref=GenBank:WP_001076048.1;Name=WP_001076048.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AD12_RS04005;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001076048.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 33553 33930 . + . ID=gene-AD12_RS04000;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AD12_RS04000;old_locus_tag=AD12_4034 NZ_JJLK01000079.1 Protein Homology CDS 33553 33930 . + 0 ID=cds-WP_001041743.1;Parent=gene-AD12_RS04000;Dbxref=GenBank:WP_001041743.1;Name=WP_001041743.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AD12_RS04000;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 33923 34510 . + . ID=gene-AD12_RS03995;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD12_RS03995;old_locus_tag=AD12_4035 NZ_JJLK01000079.1 Protein Homology CDS 33923 34510 . + 0 ID=cds-WP_000610634.1;Parent=gene-AD12_RS03995;Dbxref=GenBank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AD12_RS03995;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 34503 35486 . + . ID=gene-AD12_RS03990;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AD12_RS03990;old_locus_tag=AD12_4036 NZ_JJLK01000079.1 Protein Homology CDS 34503 35486 . + 0 ID=cds-WP_001058522.1;Parent=gene-AD12_RS03990;Dbxref=GenBank:WP_001058522.1;Name=WP_001058522.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AD12_RS03990;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058522.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 35501 36664 . + . ID=gene-AD12_RS03985;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD12_RS03985;old_locus_tag=AD12_4037 NZ_JJLK01000079.1 Protein Homology CDS 35501 36664 . + 0 ID=cds-WP_001115230.1;Parent=gene-AD12_RS03985;Dbxref=GenBank:WP_001115230.1;Name=WP_001115230.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AD12_RS03985;product=type II secretion system protein GspL;protein_id=WP_001115230.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 36661 37122 . + . ID=gene-AD12_RS03980;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AD12_RS03980;old_locus_tag=AD12_4038 NZ_JJLK01000079.1 Protein Homology CDS 36661 37122 . + 0 ID=cds-WP_001295161.1;Parent=gene-AD12_RS03980;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AD12_RS03980;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 37122 37799 . + . ID=gene-AD12_RS03975;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AD12_RS03975;old_locus_tag=AD12_4039 NZ_JJLK01000079.1 Protein Homology CDS 37122 37799 . + 0 ID=cds-WP_000178161.1;Parent=gene-AD12_RS03975;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AD12_RS03975;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 37828 38304 . - . ID=gene-AD12_RS03970;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AD12_RS03970;old_locus_tag=AD12_4040 NZ_JJLK01000079.1 Protein Homology CDS 37828 38304 . - 0 ID=cds-WP_000675504.1;Parent=gene-AD12_RS03970;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AD12_RS03970;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 38376 38570 . - . ID=gene-AD12_RS03965;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AD12_RS03965;old_locus_tag=AD12_4041 NZ_JJLK01000079.1 Protein Homology CDS 38376 38570 . - 0 ID=cds-WP_000289085.1;Parent=gene-AD12_RS03965;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AD12_RS03965;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JJLK01000079.1 RefSeq gene 38739 41432 . - . ID=gene-AD12_RS0125140;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AD12_RS0125140 NZ_JJLK01000079.1 Protein Homology CDS 38739 41432 . - 0 ID=cds-WP_000773151.1;Parent=gene-AD12_RS0125140;Dbxref=GenBank:WP_000773151.1;Name=WP_000773151.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AD12_RS0125140;product=bifunctional chitinase/lysozyme;protein_id=WP_000773151.1;transl_table=11 NZ_JJLK01000079.1 RefSeq pseudogene 41724 42024 . - . ID=gene-AD12_RS03960;Name=tuf;end_range=42024,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AD12_RS03960;old_locus_tag=AD12_4045;partial=true;pseudo=true NZ_JJLK01000079.1 Protein Homology CDS 41724 42024 . - 1 ID=cds-AD12_RS03960;Parent=gene-AD12_RS03960;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=42024,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD12_RS03960;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000080.1 1 3111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000080.1 RefSeq region 1 3111 . + . ID=NZ_JJLK01000080.1:1..3111;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000080.1 RefSeq gene 1 1646 . + . ID=gene-AD12_RS03955;Name=AD12_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03955;old_locus_tag=AD12_4046;partial=true;start_range=.,1 NZ_JJLK01000080.1 Protein Homology CDS 1 1646 . + 2 ID=cds-WP_021526197.1;Parent=gene-AD12_RS03955;Dbxref=GenBank:WP_021526197.1;Name=WP_021526197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=AD12_RS03955;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_021526197.1;start_range=.,1;transl_table=11 NZ_JJLK01000080.1 RefSeq gene 1658 2107 . + . ID=gene-AD12_RS03950;Name=AD12_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03950;old_locus_tag=AD12_4047 NZ_JJLK01000080.1 Protein Homology CDS 1658 2107 . + 0 ID=cds-WP_000978828.1;Parent=gene-AD12_RS03950;Dbxref=GenBank:WP_000978828.1;Name=WP_000978828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978828.1;locus_tag=AD12_RS03950;product=RHS element protein dsORF-h1;protein_id=WP_000978828.1;transl_table=11 NZ_JJLK01000080.1 RefSeq pseudogene 2368 3111 . + . ID=gene-AD12_RS03945;Name=AD12_RS03945;end_range=3111,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS03945;old_locus_tag=AD12_4048;partial=true;pseudo=true NZ_JJLK01000080.1 Protein Homology CDS 2368 3111 . + 0 ID=cds-AD12_RS03945;Parent=gene-AD12_RS03945;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3111,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD12_RS03945;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000081.1 1 1299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000081.1 RefSeq region 1 1299 . + . ID=NZ_JJLK01000081.1:1..1299;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000081.1 RefSeq gene 1 1236 . + . ID=gene-AD12_RS03940;Name=AD12_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03940;old_locus_tag=AD12_4049;partial=true;start_range=.,1 NZ_JJLK01000081.1 Protein Homology CDS 1 1236 . + 0 ID=cds-WP_050480842.1;Parent=gene-AD12_RS03940;Dbxref=GenBank:WP_050480842.1;Name=WP_050480842.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AD12_RS03940;partial=true;product=MFS transporter;protein_id=WP_050480842.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLK01000082.1 1 95906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000082.1 RefSeq region 1 95906 . + . ID=NZ_JJLK01000082.1:1..95906;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000082.1 RefSeq gene 1 527 . - . ID=gene-AD12_RS03935;Name=AD12_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03935;old_locus_tag=AD12_4050;partial=true;start_range=.,1 NZ_JJLK01000082.1 Protein Homology CDS 1 527 . - 0 ID=cds-WP_032286749.1;Parent=gene-AD12_RS03935;Dbxref=GenBank:WP_032286749.1;Name=WP_032286749.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312424.1;locus_tag=AD12_RS03935;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_032286749.1;start_range=.,1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 738 2135 . - . ID=gene-AD12_RS03930;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AD12_RS03930;old_locus_tag=AD12_4051 NZ_JJLK01000082.1 Protein Homology CDS 738 2135 . - 0 ID=cds-WP_000784821.1;Parent=gene-AD12_RS03930;Dbxref=GenBank:WP_000784821.1;Name=WP_000784821.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=AD12_RS03930;product=cytochrome c peroxidase;protein_id=WP_000784821.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 2540 4189 . + . ID=gene-AD12_RS03925;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AD12_RS03925;old_locus_tag=AD12_4052 NZ_JJLK01000082.1 Protein Homology CDS 2540 4189 . + 0 ID=cds-WP_000934218.1;Parent=gene-AD12_RS03925;Dbxref=GenBank:WP_000934218.1;Name=WP_000934218.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709297.1;locus_tag=AD12_RS03925;product=alpha%2Calpha-trehalase;protein_id=WP_000934218.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 4240 4842 . - . ID=gene-AD12_RS03920;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AD12_RS03920;old_locus_tag=AD12_4053 NZ_JJLK01000082.1 Protein Homology CDS 4240 4842 . - 0 ID=cds-WP_001167676.1;Parent=gene-AD12_RS03920;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AD12_RS03920;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 5362 6261 . + . ID=gene-AD12_RS03915;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AD12_RS03915;old_locus_tag=AD12_4054 NZ_JJLK01000082.1 Protein Homology CDS 5362 6261 . + 0 ID=cds-WP_001307449.1;Parent=gene-AD12_RS03915;Dbxref=GenBank:WP_001307449.1;Name=WP_001307449.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AD12_RS03915;product=LysR family transcriptional regulator;protein_id=WP_001307449.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 6310 7323 . + . ID=gene-AD12_RS03910;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AD12_RS03910;old_locus_tag=AD12_4055 NZ_JJLK01000082.1 Protein Homology CDS 6310 7323 . + 0 ID=cds-WP_000191257.1;Parent=gene-AD12_RS03910;Dbxref=GenBank:WP_000191257.1;Name=WP_000191257.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312429.1;locus_tag=AD12_RS03910;product=inner membrane protein YhjD;protein_id=WP_000191257.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 7734 9056 . + . ID=gene-AD12_RS03905;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AD12_RS03905;old_locus_tag=AD12_4056 NZ_JJLK01000082.1 Protein Homology CDS 7734 9056 . + 0 ID=cds-WP_001149002.1;Parent=gene-AD12_RS03905;Dbxref=GenBank:WP_001149002.1;Name=WP_001149002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AD12_RS03905;product=MFS transporter;protein_id=WP_001149002.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 9290 11350 . - . ID=gene-AD12_RS03900;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AD12_RS03900;old_locus_tag=AD12_4057 NZ_JJLK01000082.1 Protein Homology CDS 9290 11350 . - 0 ID=cds-WP_001296794.1;Parent=gene-AD12_RS03900;Dbxref=GenBank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AD12_RS03900;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 11420 12187 . - . ID=gene-AD12_RS0125145;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AD12_RS0125145;old_locus_tag=AD12_4058 NZ_JJLK01000082.1 Protein Homology CDS 11420 12187 . - 0 ID=cds-WP_001307451.1;Parent=gene-AD12_RS0125145;Dbxref=GenBank:WP_001307451.1;Name=WP_001307451.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AD12_RS0125145;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001307451.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 12419 13348 . + . ID=gene-AD12_RS03895;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AD12_RS03895;old_locus_tag=AD12_4060 NZ_JJLK01000082.1 Protein Homology CDS 12419 13348 . + 0 ID=cds-WP_001296796.1;Parent=gene-AD12_RS03895;Dbxref=GenBank:WP_001296796.1;Name=WP_001296796.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AD12_RS03895;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001296796.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 13444 14940 . - . ID=gene-AD12_RS03890;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AD12_RS03890;old_locus_tag=AD12_4061 NZ_JJLK01000082.1 Protein Homology CDS 13444 14940 . - 0 ID=cds-WP_003600790.1;Parent=gene-AD12_RS03890;Dbxref=GenBank:WP_003600790.1;Name=WP_003600790.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=AD12_RS03890;product=M16 family metallopeptidase;protein_id=WP_003600790.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 15161 16447 . - . ID=gene-AD12_RS03885;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AD12_RS03885;old_locus_tag=AD12_4062 NZ_JJLK01000082.1 Protein Homology CDS 15161 16447 . - 0 ID=cds-WP_000858214.1;Parent=gene-AD12_RS03885;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AD12_RS03885;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 16630 18618 . - . ID=gene-AD12_RS03880;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AD12_RS03880;old_locus_tag=AD12_4064 NZ_JJLK01000082.1 Protein Homology CDS 16630 18618 . - 0 ID=cds-WP_001266306.1;Parent=gene-AD12_RS03880;Dbxref=GenBank:WP_001266306.1;Name=WP_001266306.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AD12_RS03880;product=biofilm formation regulator HmsP;protein_id=WP_001266306.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 18700 22173 . - . ID=gene-AD12_RS03875;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AD12_RS03875;old_locus_tag=AD12_4065 NZ_JJLK01000082.1 Protein Homology CDS 18700 22173 . - 0 ID=cds-WP_001225144.1;Parent=gene-AD12_RS03875;Dbxref=GenBank:WP_001225144.1;Name=WP_001225144.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AD12_RS03875;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225144.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 22155 23261 . - . ID=gene-AD12_RS03870;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AD12_RS03870;old_locus_tag=AD12_4066 NZ_JJLK01000082.1 Protein Homology CDS 22155 23261 . - 0 ID=cds-WP_001307453.1;Parent=gene-AD12_RS03870;Dbxref=GenBank:WP_001307453.1;Name=WP_001307453.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AD12_RS03870;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001307453.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 23268 25607 . - . ID=gene-AD12_RS03865;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AD12_RS03865;old_locus_tag=AD12_4067 NZ_JJLK01000082.1 Protein Homology CDS 23268 25607 . - 0 ID=cds-WP_000823624.1;Parent=gene-AD12_RS03865;Dbxref=GenBank:WP_000823624.1;Name=WP_000823624.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AD12_RS03865;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823624.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 25618 28236 . - . ID=gene-AD12_RS03860;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AD12_RS03860;old_locus_tag=AD12_4068 NZ_JJLK01000082.1 Protein Homology CDS 25618 28236 . - 0 ID=cds-WP_000025914.1;Parent=gene-AD12_RS03860;Dbxref=GenBank:WP_000025914.1;Name=WP_000025914.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AD12_RS03860;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_000025914.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 28233 28985 . - . ID=gene-AD12_RS03855;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AD12_RS03855;old_locus_tag=AD12_4069 NZ_JJLK01000082.1 Protein Homology CDS 28233 28985 . - 0 ID=cds-WP_001744454.1;Parent=gene-AD12_RS03855;Dbxref=GenBank:WP_001744454.1;Name=WP_001744454.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AD12_RS03855;product=cellulose biosynthesis protein BcsQ;protein_id=WP_001744454.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 28997 29185 . - . ID=gene-AD12_RS03850;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AD12_RS03850;old_locus_tag=AD12_4070 NZ_JJLK01000082.1 Protein Homology CDS 28997 29185 . - 0 ID=cds-WP_001063318.1;Parent=gene-AD12_RS03850;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AD12_RS03850;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 29458 31029 . + . ID=gene-AD12_RS03845;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AD12_RS03845;old_locus_tag=AD12_4071 NZ_JJLK01000082.1 Protein Homology CDS 29458 31029 . + 0 ID=cds-WP_001204931.1;Parent=gene-AD12_RS03845;Dbxref=GenBank:WP_001204931.1;Name=WP_001204931.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AD12_RS03845;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001204931.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 31026 31217 . + . ID=gene-AD12_RS03840;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AD12_RS03840;old_locus_tag=AD12_4072 NZ_JJLK01000082.1 Protein Homology CDS 31026 31217 . + 0 ID=cds-WP_000988308.1;Parent=gene-AD12_RS03840;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AD12_RS03840;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 31214 32893 . + . ID=gene-AD12_RS03835;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AD12_RS03835;old_locus_tag=AD12_4073 NZ_JJLK01000082.1 Protein Homology CDS 31214 32893 . + 0 ID=cds-WP_000191596.1;Parent=gene-AD12_RS03835;Dbxref=GenBank:WP_000191596.1;Name=WP_000191596.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312445.1;locus_tag=AD12_RS03835;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191596.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 32980 33087 . - . ID=gene-AD12_RS27455;Name=AD12_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS27455 NZ_JJLK01000082.1 Protein Homology CDS 32980 33087 . - 0 ID=cds-WP_001295224.1;Parent=gene-AD12_RS27455;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AD12_RS27455;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 33463 33570 . - . ID=gene-AD12_RS28900;Name=AD12_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28900 NZ_JJLK01000082.1 Protein Homology CDS 33463 33570 . - 0 ID=cds-WP_001295224.1-2;Parent=gene-AD12_RS28900;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AD12_RS28900;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 33946 34053 . - . ID=gene-AD12_RS28910;Name=AD12_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28910 NZ_JJLK01000082.1 Protein Homology CDS 33946 34053 . - 0 ID=cds-WP_001295224.1-3;Parent=gene-AD12_RS28910;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AD12_RS28910;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 34429 34536 . - . ID=gene-AD12_RS28315;Name=AD12_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28315 NZ_JJLK01000082.1 Protein Homology CDS 34429 34536 . - 0 ID=cds-WP_001295224.1-4;Parent=gene-AD12_RS28315;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AD12_RS28315;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 35012 36283 . + . ID=gene-AD12_RS03810;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AD12_RS03810;old_locus_tag=AD12_4081 NZ_JJLK01000082.1 Protein Homology CDS 35012 36283 . + 0 ID=cds-WP_001296805.1;Parent=gene-AD12_RS03810;Dbxref=GenBank:WP_001296805.1;Name=WP_001296805.1;gbkey=CDS;gene=yhjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AD12_RS03810;product=aromatic amino acid transport family protein;protein_id=WP_001296805.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 36313 37317 . - . ID=gene-AD12_RS03805;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AD12_RS03805;old_locus_tag=AD12_4082 NZ_JJLK01000082.1 Protein Homology CDS 36313 37317 . - 0 ID=cds-WP_000107031.1;Parent=gene-AD12_RS03805;Dbxref=GenBank:WP_000107031.1;Name=WP_000107031.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312447.1;locus_tag=AD12_RS03805;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107031.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 37314 38297 . - . ID=gene-AD12_RS03800;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AD12_RS03800;old_locus_tag=AD12_4083 NZ_JJLK01000082.1 Protein Homology CDS 37314 38297 . - 0 ID=cds-WP_001196486.1;Parent=gene-AD12_RS03800;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AD12_RS03800;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 38308 39210 . - . ID=gene-AD12_RS03795;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AD12_RS03795;old_locus_tag=AD12_4084 NZ_JJLK01000082.1 Protein Homology CDS 38308 39210 . - 0 ID=cds-WP_000084677.1;Parent=gene-AD12_RS03795;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AD12_RS03795;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 39220 40239 . - . ID=gene-AD12_RS03790;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AD12_RS03790;old_locus_tag=AD12_4085 NZ_JJLK01000082.1 Protein Homology CDS 39220 40239 . - 0 ID=cds-WP_000938855.1;Parent=gene-AD12_RS03790;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AD12_RS03790;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 40547 42154 . - . ID=gene-AD12_RS03785;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AD12_RS03785;old_locus_tag=AD12_4087 NZ_JJLK01000082.1 Protein Homology CDS 40547 42154 . - 0 ID=cds-WP_001222883.1;Parent=gene-AD12_RS03785;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AD12_RS03785;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 42900 43033 . - . ID=gene-AD12_RS25860;Name=AD12_RS25860;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25860 NZ_JJLK01000082.1 cmsearch ncRNA 42900 43033 . - . ID=rna-AD12_RS25860;Parent=gene-AD12_RS25860;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25860;product=RtT sRNA NZ_JJLK01000082.1 cmsearch exon 42900 43033 . - . ID=exon-AD12_RS25860-1;Parent=rna-AD12_RS25860;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25860;product=RtT sRNA NZ_JJLK01000082.1 RefSeq gene 43068 43201 . - . ID=gene-AD12_RS25865;Name=AD12_RS25865;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25865 NZ_JJLK01000082.1 cmsearch ncRNA 43068 43201 . - . ID=rna-AD12_RS25865;Parent=gene-AD12_RS25865;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25865;product=RtT sRNA NZ_JJLK01000082.1 cmsearch exon 43068 43201 . - . ID=exon-AD12_RS25865-1;Parent=rna-AD12_RS25865;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25865;product=RtT sRNA NZ_JJLK01000082.1 RefSeq gene 43236 43369 . - . ID=gene-AD12_RS25870;Name=AD12_RS25870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD12_RS25870 NZ_JJLK01000082.1 cmsearch ncRNA 43236 43369 . - . ID=rna-AD12_RS25870;Parent=gene-AD12_RS25870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25870;product=RtT sRNA NZ_JJLK01000082.1 cmsearch exon 43236 43369 . - . ID=exon-AD12_RS25870-1;Parent=rna-AD12_RS25870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS25870;product=RtT sRNA NZ_JJLK01000082.1 RefSeq gene 43404 43480 . - . ID=gene-AD12_RS03780;Name=AD12_RS03780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS03780;old_locus_tag=AD12_4091 NZ_JJLK01000082.1 tRNAscan-SE tRNA 43404 43480 . - . ID=rna-AD12_RS03780;Parent=gene-AD12_RS03780;anticodon=(pos:complement(43444..43446));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS03780;product=tRNA-Pro NZ_JJLK01000082.1 tRNAscan-SE exon 43404 43480 . - . ID=exon-AD12_RS03780-1;Parent=rna-AD12_RS03780;anticodon=(pos:complement(43444..43446));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS03780;product=tRNA-Pro NZ_JJLK01000082.1 RefSeq gene 43572 45263 . - . ID=gene-AD12_RS03775;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AD12_RS03775;old_locus_tag=AD12_4092 NZ_JJLK01000082.1 Protein Homology CDS 43572 45263 . - 0 ID=cds-WP_001269224.1;Parent=gene-AD12_RS03775;Dbxref=GenBank:WP_001269224.1;Name=WP_001269224.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AD12_RS03775;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269224.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 45587 46795 . - . ID=gene-AD12_RS03770;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AD12_RS03770;old_locus_tag=AD12_4093 NZ_JJLK01000082.1 Protein Homology CDS 45587 46795 . - 0 ID=cds-WP_000189037.1;Parent=gene-AD12_RS03770;Dbxref=GenBank:WP_000189037.1;Name=WP_000189037.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709325.2;locus_tag=AD12_RS03770;product=L-lactate MFS transporter;protein_id=WP_000189037.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 47024 47722 . - . ID=gene-AD12_RS03765;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AD12_RS03765;old_locus_tag=AD12_4094 NZ_JJLK01000082.1 Protein Homology CDS 47024 47722 . - 0 ID=cds-WP_001296791.1;Parent=gene-AD12_RS03765;Dbxref=GenBank:WP_001296791.1;Name=WP_001296791.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709326.2;locus_tag=AD12_RS03765;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001296791.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 47880 48443 . + . ID=gene-AD12_RS03760;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AD12_RS03760;old_locus_tag=AD12_4095 NZ_JJLK01000082.1 Protein Homology CDS 47880 48443 . + 0 ID=cds-WP_000438953.1;Parent=gene-AD12_RS03760;Dbxref=GenBank:WP_000438953.1;Name=WP_000438953.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AD12_RS03760;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438953.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 48440 48880 . + . ID=gene-AD12_RS03755;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AD12_RS03755;old_locus_tag=AD12_4096 NZ_JJLK01000082.1 Protein Homology CDS 48440 48880 . + 0 ID=cds-WP_000617478.1;Parent=gene-AD12_RS03755;Dbxref=GenBank:WP_000617478.1;Name=WP_000617478.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709328.1;locus_tag=AD12_RS03755;product=N-acetyltransferase;protein_id=WP_000617478.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 48849 51182 . - . ID=gene-AD12_RS03750;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AD12_RS03750;old_locus_tag=AD12_4097 NZ_JJLK01000082.1 Protein Homology CDS 48849 51182 . - 0 ID=cds-WP_071999197.1;Parent=gene-AD12_RS03750;Dbxref=GenBank:WP_071999197.1;Name=WP_071999197.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AD12_RS03750;product=biotin sulfoxide reductase;protein_id=WP_071999197.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 51335 51994 . + . ID=gene-AD12_RS03745;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AD12_RS03745;old_locus_tag=AD12_4098 NZ_JJLK01000082.1 Protein Homology CDS 51335 51994 . + 0 ID=cds-WP_000747625.1;Parent=gene-AD12_RS03745;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AD12_RS03745;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 52098 53072 . + . ID=gene-AD12_RS03740;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AD12_RS03740;old_locus_tag=AD12_4099 NZ_JJLK01000082.1 Protein Homology CDS 52098 53072 . + 0 ID=cds-WP_000805027.1;Parent=gene-AD12_RS03740;Dbxref=GenBank:WP_000805027.1;Name=WP_000805027.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312465.2;locus_tag=AD12_RS03740;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805027.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 53122 53832 . - . ID=gene-AD12_RS03735;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AD12_RS03735;old_locus_tag=AD12_4100 NZ_JJLK01000082.1 Protein Homology CDS 53122 53832 . - 0 ID=cds-WP_000190517.1;Parent=gene-AD12_RS03735;Dbxref=GenBank:WP_000190517.1;Name=WP_000190517.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AD12_RS03735;product=DUF3053 domain-containing protein;protein_id=WP_000190517.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 54266 54556 . + . ID=gene-AD12_RS03730;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AD12_RS03730;old_locus_tag=AD12_4101 NZ_JJLK01000082.1 Protein Homology CDS 54266 54556 . + 0 ID=cds-WP_010344962.1;Parent=gene-AD12_RS03730;Dbxref=GenBank:WP_010344962.1;Name=WP_010344962.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AD12_RS03730;product=HTH-type transcriptional regulator;protein_id=WP_010344962.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 54837 55049 . + . ID=gene-AD12_RS03725;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD12_RS03725;old_locus_tag=AD12_4102 NZ_JJLK01000082.1 Protein Homology CDS 54837 55049 . + 0 ID=cds-WP_000014594.1;Parent=gene-AD12_RS03725;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AD12_RS03725;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 55189 55248 . + . ID=gene-AD12_RS29320;Name=AD12_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29320 NZ_JJLK01000082.1 Protein Homology CDS 55189 55248 . + 0 ID=cds-WP_212591412.1;Parent=gene-AD12_RS29320;Dbxref=GenBank:WP_212591412.1;Name=WP_212591412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AD12_RS29320;product=hypothetical protein;protein_id=WP_212591412.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 55237 55389 . - . ID=gene-AD12_RS0125175;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AD12_RS0125175;old_locus_tag=AD12_4103 NZ_JJLK01000082.1 Protein Homology CDS 55237 55389 . - 0 ID=cds-WP_001135738.1;Parent=gene-AD12_RS0125175;Dbxref=GenBank:WP_001135738.1;Name=WP_001135738.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AD12_RS0125175;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135738.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 55715 57784 . - . ID=gene-AD12_RS03720;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AD12_RS03720;old_locus_tag=AD12_4104 NZ_JJLK01000082.1 Protein Homology CDS 55715 57784 . - 0 ID=cds-WP_001291774.1;Parent=gene-AD12_RS03720;Dbxref=GenBank:WP_001291774.1;Name=WP_001291774.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AD12_RS03720;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291774.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 57794 58705 . - . ID=gene-AD12_RS03715;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AD12_RS03715;old_locus_tag=AD12_4105 NZ_JJLK01000082.1 Protein Homology CDS 57794 58705 . - 0 ID=cds-WP_001168544.1;Parent=gene-AD12_RS03715;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AD12_RS03715;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 58800 59099 . - . ID=gene-AD12_RS03710;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AD12_RS03710;old_locus_tag=AD12_4106 NZ_JJLK01000082.1 Protein Homology CDS 58800 59099 . - 0 ID=cds-WP_000980111.1;Parent=gene-AD12_RS03710;Dbxref=GenBank:WP_000980111.1;Name=WP_000980111.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709347.1;locus_tag=AD12_RS03710;product=YsaB family lipoprotein;protein_id=WP_000980111.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 59274 60269 . + . ID=gene-AD12_RS0125180;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AD12_RS0125180;old_locus_tag=AD12_4107 NZ_JJLK01000082.1 Protein Homology CDS 59274 60269 . + 0 ID=cds-WP_001182653.1;Parent=gene-AD12_RS0125180;Dbxref=GenBank:WP_001182653.1;Name=WP_001182653.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709348.1;locus_tag=AD12_RS0125180;product=O-acetyltransferase WecH;protein_id=WP_001182653.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 60311 60748 . - . ID=gene-AD12_RS0125185;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AD12_RS0125185;old_locus_tag=AD12_4108 NZ_JJLK01000082.1 Protein Homology CDS 60311 60748 . - 0 ID=cds-WP_001296808.1;Parent=gene-AD12_RS0125185;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AD12_RS0125185;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 60794 61135 . - . ID=gene-AD12_RS03705;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AD12_RS03705;old_locus_tag=AD12_4109 NZ_JJLK01000082.1 Protein Homology CDS 60794 61135 . - 0 ID=cds-WP_000858193.1;Parent=gene-AD12_RS03705;Dbxref=GenBank:WP_000858193.1;Name=WP_000858193.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709350.2;locus_tag=AD12_RS03705;product=inner membrane protein YiaB;protein_id=WP_000858193.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 61304 62758 . - . ID=gene-AD12_RS03700;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AD12_RS03700;old_locus_tag=AD12_4110 NZ_JJLK01000082.1 Protein Homology CDS 61304 62758 . - 0 ID=cds-WP_032286753.1;Parent=gene-AD12_RS03700;Dbxref=GenBank:WP_032286753.1;Name=WP_032286753.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709351.1;locus_tag=AD12_RS03700;product=xylulokinase;protein_id=WP_032286753.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 62830 64152 . - . ID=gene-AD12_RS03695;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AD12_RS03695;old_locus_tag=AD12_4111 NZ_JJLK01000082.1 Protein Homology CDS 62830 64152 . - 0 ID=cds-WP_001149581.1;Parent=gene-AD12_RS03695;Dbxref=GenBank:WP_001149581.1;Name=WP_001149581.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312475.1;locus_tag=AD12_RS03695;product=xylose isomerase;protein_id=WP_001149581.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 64518 65510 . + . ID=gene-AD12_RS03690;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AD12_RS03690;old_locus_tag=AD12_4112 NZ_JJLK01000082.1 Protein Homology CDS 64518 65510 . + 0 ID=cds-WP_001296518.1;Parent=gene-AD12_RS03690;Dbxref=GenBank:WP_001296518.1;Name=WP_001296518.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AD12_RS03690;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_001296518.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 65588 67129 . + . ID=gene-AD12_RS03685;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AD12_RS03685;old_locus_tag=AD12_4113 NZ_JJLK01000082.1 Protein Homology CDS 65588 67129 . + 0 ID=cds-WP_001146479.1;Parent=gene-AD12_RS03685;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AD12_RS03685;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 67107 68288 . + . ID=gene-AD12_RS03680;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AD12_RS03680;old_locus_tag=AD12_4114 NZ_JJLK01000082.1 Protein Homology CDS 67107 68288 . + 0 ID=cds-WP_000045978.1;Parent=gene-AD12_RS03680;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AD12_RS03680;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 68366 69544 . + . ID=gene-AD12_RS03675;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AD12_RS03675;old_locus_tag=AD12_4115 NZ_JJLK01000082.1 Protein Homology CDS 68366 69544 . + 0 ID=cds-WP_000494484.1;Parent=gene-AD12_RS03675;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AD12_RS03675;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 69652 70476 . - . ID=gene-AD12_RS0125190;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AD12_RS0125190;old_locus_tag=AD12_4116 NZ_JJLK01000082.1 Protein Homology CDS 69652 70476 . - 0 ID=cds-WP_001297957.1;Parent=gene-AD12_RS0125190;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AD12_RS0125190;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 70796 72826 . + . ID=gene-AD12_RS03670;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AD12_RS03670;old_locus_tag=AD12_4118 NZ_JJLK01000082.1 Protein Homology CDS 70796 72826 . + 0 ID=cds-WP_000761294.1;Parent=gene-AD12_RS03670;Dbxref=GenBank:WP_000761294.1;Name=WP_000761294.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709356.1;locus_tag=AD12_RS03670;product=alpha-amylase;protein_id=WP_000761294.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 73004 74257 . + . ID=gene-AD12_RS03665;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AD12_RS03665;old_locus_tag=AD12_4119 NZ_JJLK01000082.1 Protein Homology CDS 73004 74257 . + 0 ID=cds-WP_003968755.1;Parent=gene-AD12_RS03665;Dbxref=GenBank:WP_003968755.1;Name=WP_003968755.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312482.1;locus_tag=AD12_RS03665;product=valine--pyruvate transaminase;protein_id=WP_003968755.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 74408 74881 . - . ID=gene-AD12_RS03660;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AD12_RS03660;old_locus_tag=AD12_4120 NZ_JJLK01000082.1 Protein Homology CDS 74408 74881 . - 0 ID=cds-WP_001298710.1;Parent=gene-AD12_RS03660;Dbxref=GenBank:WP_001298710.1;Name=WP_001298710.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AD12_RS03660;product=4Fe-4S binding protein;protein_id=WP_001298710.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 74983 75831 . - . ID=gene-AD12_RS03655;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AD12_RS03655;old_locus_tag=AD12_4121 NZ_JJLK01000082.1 Protein Homology CDS 74983 75831 . - 0 ID=cds-WP_001707344.1;Parent=gene-AD12_RS03655;Dbxref=GenBank:WP_001707344.1;Name=WP_001707344.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AD12_RS03655;product=IclR family transcriptional regulator YiaJ;protein_id=WP_001707344.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 76032 77030 . + . ID=gene-AD12_RS03650;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AD12_RS03650;old_locus_tag=AD12_4122 NZ_JJLK01000082.1 Protein Homology CDS 76032 77030 . + 0 ID=cds-WP_000869039.1;Parent=gene-AD12_RS03650;Dbxref=GenBank:WP_000869039.1;Name=WP_000869039.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709360.1;locus_tag=AD12_RS03650;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869039.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 77042 77509 . + . ID=gene-AD12_RS03645;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AD12_RS03645;old_locus_tag=AD12_4123 NZ_JJLK01000082.1 Protein Homology CDS 77042 77509 . + 0 ID=cds-WP_000576071.1;Parent=gene-AD12_RS03645;Dbxref=GenBank:WP_000576071.1;Name=WP_000576071.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AD12_RS03645;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576071.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 77627 78100 . + . ID=gene-AD12_RS03640;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AD12_RS03640;old_locus_tag=AD12_4124 NZ_JJLK01000082.1 Protein Homology CDS 77627 78100 . + 0 ID=cds-WP_000721664.1;Parent=gene-AD12_RS03640;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AD12_RS03640;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 78103 79380 . + . ID=gene-AD12_RS03635;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AD12_RS03635;old_locus_tag=AD12_4125 NZ_JJLK01000082.1 Protein Homology CDS 78103 79380 . + 0 ID=cds-WP_001463776.1;Parent=gene-AD12_RS03635;Dbxref=GenBank:WP_001463776.1;Name=WP_001463776.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AD12_RS03635;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_001463776.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 79393 80379 . + . ID=gene-AD12_RS03630;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AD12_RS03630;old_locus_tag=AD12_4126 NZ_JJLK01000082.1 Protein Homology CDS 79393 80379 . + 0 ID=cds-WP_000776894.1;Parent=gene-AD12_RS03630;Dbxref=GenBank:WP_000776894.1;Name=WP_000776894.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AD12_RS03630;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000776894.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 80383 81879 . + . ID=gene-AD12_RS03625;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AD12_RS03625;old_locus_tag=AD12_4127 NZ_JJLK01000082.1 Protein Homology CDS 80383 81879 . + 0 ID=cds-WP_000196082.1;Parent=gene-AD12_RS03625;Dbxref=GenBank:WP_000196082.1;Name=WP_000196082.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AD12_RS03625;product=L-xylulokinase;protein_id=WP_000196082.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 81876 82538 . + . ID=gene-AD12_RS03620;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD12_RS03620;old_locus_tag=AD12_4128 NZ_JJLK01000082.1 Protein Homology CDS 81876 82538 . + 0 ID=cds-WP_000089495.1;Parent=gene-AD12_RS03620;Dbxref=GenBank:WP_000089495.1;Name=WP_000089495.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AD12_RS03620;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089495.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 82531 83391 . + . ID=gene-AD12_RS03615;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AD12_RS03615;old_locus_tag=AD12_4129 NZ_JJLK01000082.1 Protein Homology CDS 82531 83391 . + 0 ID=cds-WP_001323662.1;Parent=gene-AD12_RS03615;Dbxref=GenBank:WP_001323662.1;Name=WP_001323662.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AD12_RS03615;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001323662.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 83385 84080 . + . ID=gene-AD12_RS03610;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD12_RS03610;old_locus_tag=AD12_4130 NZ_JJLK01000082.1 Protein Homology CDS 83385 84080 . + 0 ID=cds-WP_000893123.1;Parent=gene-AD12_RS03610;Dbxref=GenBank:WP_000893123.1;Name=WP_000893123.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AD12_RS03610;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893123.1;transl_table=11 NZ_JJLK01000082.1 RefSeq pseudogene 84112 84213 . - . ID=gene-AD12_RS29215;Name=AD12_RS29215;end_range=84213,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29215;partial=true;pseudo=true NZ_JJLK01000082.1 Protein Homology CDS 84112 84213 . - 0 ID=cds-AD12_RS29215;Parent=gene-AD12_RS29215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=84213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AD12_RS29215;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLK01000082.1 RefSeq pseudogene 84217 84405 . + . ID=gene-AD12_RS28915;Name=AD12_RS28915;end_range=84405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28915;partial=true;pseudo=true;start_range=.,84217 NZ_JJLK01000082.1 Protein Homology CDS 84217 84405 . + 0 ID=cds-AD12_RS28915;Parent=gene-AD12_RS28915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=84405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AD12_RS28915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,84217;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 84427 85167 . - . ID=gene-AD12_RS03605;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AD12_RS03605;old_locus_tag=AD12_4131 NZ_JJLK01000082.1 Protein Homology CDS 84427 85167 . - 0 ID=cds-WP_000906822.1;Parent=gene-AD12_RS03605;Dbxref=GenBank:WP_000906822.1;Name=WP_000906822.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=AD12_RS03605;product=MipA/OmpV family protein;protein_id=WP_000906822.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 85291 86265 . + . ID=gene-AD12_RS03600;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AD12_RS03600;old_locus_tag=AD12_4132 NZ_JJLK01000082.1 Protein Homology CDS 85291 86265 . + 0 ID=cds-WP_000164033.1;Parent=gene-AD12_RS03600;Dbxref=GenBank:WP_000164033.1;Name=WP_000164033.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312488.1;locus_tag=AD12_RS03600;product=LysR family transcriptional regulator;protein_id=WP_000164033.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 86262 87398 . - . ID=gene-AD12_RS03595;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AD12_RS03595;old_locus_tag=AD12_4133 NZ_JJLK01000082.1 Protein Homology CDS 86262 87398 . - 0 ID=cds-WP_000364884.1;Parent=gene-AD12_RS03595;Dbxref=GenBank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AD12_RS03595;product=HlyD family secretion protein;protein_id=WP_000364884.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 87404 87727 . - . ID=gene-AD12_RS03590;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AD12_RS03590;old_locus_tag=AD12_4134 NZ_JJLK01000082.1 Protein Homology CDS 87404 87727 . - 0 ID=cds-WP_000478193.1;Parent=gene-AD12_RS03590;Dbxref=GenBank:WP_000478193.1;Name=WP_000478193.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AD12_RS03590;product=DUF3302 domain-containing protein;protein_id=WP_000478193.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 87850 88053 . + . ID=gene-AD12_RS0125200;Name=AD12_RS0125200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125200;old_locus_tag=AD12_4135 NZ_JJLK01000082.1 GeneMarkS-2+ CDS 87850 88053 . + 0 ID=cds-WP_000885436.1;Parent=gene-AD12_RS0125200;Dbxref=GenBank:WP_000885436.1;Name=WP_000885436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS0125200;product=hypothetical protein;protein_id=WP_000885436.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 88272 89810 . - . ID=gene-AD12_RS03585;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AD12_RS03585;old_locus_tag=AD12_4136 NZ_JJLK01000082.1 Protein Homology CDS 88272 89810 . - 0 ID=cds-WP_032286755.1;Parent=gene-AD12_RS03585;Dbxref=GenBank:WP_032286755.1;Name=WP_032286755.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AD12_RS03585;product=aldehyde dehydrogenase AldB;protein_id=WP_032286755.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 89975 91126 . - . ID=gene-AD12_RS03580;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AD12_RS03580;old_locus_tag=AD12_4137 NZ_JJLK01000082.1 Protein Homology CDS 89975 91126 . - 0 ID=cds-WP_000168712.1;Parent=gene-AD12_RS03580;Dbxref=GenBank:WP_000168712.1;Name=WP_000168712.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312493.1;locus_tag=AD12_RS03580;product=L-threonine dehydrogenase;protein_id=WP_000168712.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 91316 93160 . - . ID=gene-AD12_RS03575;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AD12_RS03575;old_locus_tag=AD12_4138 NZ_JJLK01000082.1 Protein Homology CDS 91316 93160 . - 0 ID=cds-WP_000582465.1;Parent=gene-AD12_RS03575;Dbxref=GenBank:WP_000582465.1;Name=WP_000582465.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AD12_RS03575;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582465.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 93157 94548 . - . ID=gene-AD12_RS03570;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AD12_RS03570;old_locus_tag=AD12_4139 NZ_JJLK01000082.1 Protein Homology CDS 93157 94548 . - 0 ID=cds-WP_000206275.1;Parent=gene-AD12_RS03570;Dbxref=GenBank:WP_000206275.1;Name=WP_000206275.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AD12_RS03570;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 94646 95254 . - . ID=gene-AD12_RS03565;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AD12_RS03565;old_locus_tag=AD12_4140 NZ_JJLK01000082.1 Protein Homology CDS 94646 95254 . - 0 ID=cds-WP_000779792.1;Parent=gene-AD12_RS03565;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AD12_RS03565;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JJLK01000082.1 RefSeq gene 95483 95906 . + . ID=gene-AD12_RS03560;Name=AD12_RS03560;end_range=95906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03560;old_locus_tag=AD12_4142;partial=true NZ_JJLK01000082.1 Protein Homology CDS 95483 95906 . + 0 ID=cds-WP_000015149.1;Parent=gene-AD12_RS03560;Dbxref=GenBank:WP_000015149.1;Name=WP_000015149.1;end_range=95906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD12_RS03560;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_000015149.1;transl_table=11 ##sequence-region NZ_JJLK01000083.1 1 88073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000083.1 RefSeq region 1 88073 . + . ID=NZ_JJLK01000083.1:1..88073;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000083.1 RefSeq gene 1 2926 . + . ID=gene-AD12_RS03555;Name=AD12_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03555;old_locus_tag=AD12_4143;partial=true;start_range=.,1 NZ_JJLK01000083.1 Protein Homology CDS 1 2926 . + 1 ID=cds-WP_032286757.1;Parent=gene-AD12_RS03555;Dbxref=GenBank:WP_032286757.1;Name=WP_032286757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD12_RS03555;partial=true;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_032286757.1;start_range=.,1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 2947 3789 . + . ID=gene-AD12_RS03550;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AD12_RS03550;old_locus_tag=AD12_4144 NZ_JJLK01000083.1 Protein Homology CDS 2947 3789 . + 0 ID=cds-WP_000072850.1;Parent=gene-AD12_RS03550;Dbxref=GenBank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AD12_RS03550;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11 NZ_JJLK01000083.1 RefSeq pseudogene 3819 4775 . + . ID=gene-AD12_RS03545;Name=AD12_RS03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS03545;old_locus_tag=AD12_4145;partial=true;pseudo=true;start_range=.,3819 NZ_JJLK01000083.1 Protein Homology CDS 3819 4775 . + 0 ID=cds-AD12_RS03545;Parent=gene-AD12_RS03545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=AD12_RS03545;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3819;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 4787 5248 . + . ID=gene-AD12_RS0125220;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AD12_RS0125220 NZ_JJLK01000083.1 Protein Homology CDS 4787 5248 . + 0 ID=cds-WP_000642489.1;Parent=gene-AD12_RS0125220;Dbxref=GenBank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AD12_RS0125220;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11 NZ_JJLK01000083.1 RefSeq pseudogene 5282 5500 . + . ID=gene-AD12_RS29935;Name=AD12_RS29935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29935;partial=true;pseudo=true;start_range=.,5282 NZ_JJLK01000083.1 Protein Homology CDS 5282 5500 . + 0 ID=cds-AD12_RS29935;Parent=gene-AD12_RS29935;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD12_RS29935;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,5282;transl_table=11 NZ_JJLK01000083.1 RefSeq pseudogene 5872 6392 . + . ID=gene-AD12_RS0125225;Name=AD12_RS0125225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0125225;pseudo=true NZ_JJLK01000083.1 Protein Homology CDS 5872 6392 . + 0 ID=cds-AD12_RS0125225;Parent=gene-AD12_RS0125225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AD12_RS0125225;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 6852 7988 . - . ID=gene-AD12_RS03540;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AD12_RS03540;old_locus_tag=AD12_4146 NZ_JJLK01000083.1 Protein Homology CDS 6852 7988 . - 0 ID=cds-WP_000364939.1;Parent=gene-AD12_RS03540;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AD12_RS03540;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 7991 8353 . - . ID=gene-AD12_RS03535;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AD12_RS03535;old_locus_tag=AD12_4147 NZ_JJLK01000083.1 Protein Homology CDS 7991 8353 . - 0 ID=cds-WP_000479626.1;Parent=gene-AD12_RS03535;Dbxref=GenBank:WP_000479626.1;Name=WP_000479626.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312501.1;locus_tag=AD12_RS03535;product=DUF3302 domain-containing protein;protein_id=WP_000479626.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 8890 10803 . + . ID=gene-AD12_RS03530;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AD12_RS03530;old_locus_tag=AD12_4148 NZ_JJLK01000083.1 Protein Homology CDS 8890 10803 . + 0 ID=cds-WP_000093258.1;Parent=gene-AD12_RS03530;Dbxref=GenBank:WP_000093258.1;Name=WP_000093258.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709373.1;locus_tag=AD12_RS03530;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093258.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 11033 12181 . + . ID=gene-AD12_RS03525;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AD12_RS03525;old_locus_tag=AD12_4149 NZ_JJLK01000083.1 Protein Homology CDS 11033 12181 . + 0 ID=cds-WP_000645430.1;Parent=gene-AD12_RS03525;Dbxref=GenBank:WP_000645430.1;Name=WP_000645430.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709374.2;locus_tag=AD12_RS03525;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645430.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 12181 12768 . + . ID=gene-AD12_RS03520;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AD12_RS03520;old_locus_tag=AD12_4150 NZ_JJLK01000083.1 Protein Homology CDS 12181 12768 . + 0 ID=cds-WP_000228271.1;Parent=gene-AD12_RS03520;Dbxref=GenBank:WP_000228271.1;Name=WP_000228271.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312504.1;locus_tag=AD12_RS03520;product=mannitol operon repressor MtlR;protein_id=WP_000228271.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 12780 12989 . - . ID=gene-AD12_RS03515;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AD12_RS03515;old_locus_tag=AD12_4151 NZ_JJLK01000083.1 Protein Homology CDS 12780 12989 . - 0 ID=cds-WP_000517100.1;Parent=gene-AD12_RS03515;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AD12_RS03515;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 13274 13636 . + . ID=gene-AD12_RS03510;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AD12_RS03510;old_locus_tag=AD12_4152 NZ_JJLK01000083.1 Protein Homology CDS 13274 13636 . + 0 ID=cds-WP_000665680.1;Parent=gene-AD12_RS03510;Dbxref=GenBank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AD12_RS03510;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 14179 14862 . + . ID=gene-AD12_RS03505;Name=AD12_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03505;old_locus_tag=AD12_4153 NZ_JJLK01000083.1 Protein Homology CDS 14179 14862 . + 0 ID=cds-WP_001049539.1;Parent=gene-AD12_RS03505;Dbxref=GenBank:WP_001049539.1;Name=WP_001049539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1;locus_tag=AD12_RS03505;product=DUF3251 domain-containing protein;protein_id=WP_001049539.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 14906 19756 . + . ID=gene-AD12_RS03500;Name=ehaG;gbkey=Gene;gene=ehaG;gene_biotype=protein_coding;locus_tag=AD12_RS03500;old_locus_tag=AD12_4154 NZ_JJLK01000083.1 Protein Homology CDS 14906 19756 . + 0 ID=cds-WP_001033219.1;Parent=gene-AD12_RS03500;Dbxref=GenBank:WP_001033219.1;Name=WP_001033219.1;gbkey=CDS;gene=ehaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AD12_RS03500;product=trimeric autotransporter adhesin EhaG;protein_id=WP_001033219.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 20124 21779 . + . ID=gene-AD12_RS03495;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AD12_RS03495;old_locus_tag=AD12_4155 NZ_JJLK01000083.1 Protein Homology CDS 20124 21779 . + 0 ID=cds-WP_001297977.1;Parent=gene-AD12_RS03495;Dbxref=GenBank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AD12_RS03495;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 21779 22555 . + . ID=gene-AD12_RS03490;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AD12_RS03490;old_locus_tag=AD12_4156 NZ_JJLK01000083.1 Protein Homology CDS 21779 22555 . + 0 ID=cds-WP_000636500.1;Parent=gene-AD12_RS03490;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AD12_RS03490;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 22552 23742 . + . ID=gene-AD12_RS03485;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AD12_RS03485;old_locus_tag=AD12_4157 NZ_JJLK01000083.1 Protein Homology CDS 22552 23742 . + 0 ID=cds-WP_000586977.1;Parent=gene-AD12_RS03485;Dbxref=GenBank:WP_000586977.1;Name=WP_000586977.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312510.1;locus_tag=AD12_RS03485;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586977.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 23928 24401 . + . ID=gene-AD12_RS03480;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AD12_RS03480;old_locus_tag=AD12_4158 NZ_JJLK01000083.1 Protein Homology CDS 23928 24401 . + 0 ID=cds-WP_000932346.1;Parent=gene-AD12_RS03480;Dbxref=GenBank:WP_000932346.1;Name=WP_000932346.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709385.1;locus_tag=AD12_RS03480;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932346.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 24454 25275 . - . ID=gene-AD12_RS03475;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AD12_RS03475;old_locus_tag=AD12_4159 NZ_JJLK01000083.1 Protein Homology CDS 24454 25275 . - 0 ID=cds-WP_001277561.1;Parent=gene-AD12_RS03475;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AD12_RS03475;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 25355 26374 . - . ID=gene-AD12_RS03470;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AD12_RS03470;old_locus_tag=AD12_4160 NZ_JJLK01000083.1 Protein Homology CDS 25355 26374 . - 0 ID=cds-WP_001076194.1;Parent=gene-AD12_RS03470;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AD12_RS03470;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 26374 26841 . - . ID=gene-AD12_RS03465;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AD12_RS03465;old_locus_tag=AD12_4161 NZ_JJLK01000083.1 Protein Homology CDS 26374 26841 . - 0 ID=cds-WP_000003377.1;Parent=gene-AD12_RS03465;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AD12_RS03465;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 26904 27155 . - . ID=gene-AD12_RS03460;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AD12_RS03460;old_locus_tag=AD12_4162 NZ_JJLK01000083.1 Protein Homology CDS 26904 27155 . - 0 ID=cds-WP_000024392.1;Parent=gene-AD12_RS03460;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AD12_RS03460;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 27297 27728 . - . ID=gene-AD12_RS03455;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AD12_RS03455;old_locus_tag=AD12_4163 NZ_JJLK01000083.1 Protein Homology CDS 27297 27728 . - 0 ID=cds-WP_001156181.1;Parent=gene-AD12_RS03455;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AD12_RS03455;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 27973 29517 . + . ID=gene-AD12_RS03450;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AD12_RS03450;old_locus_tag=AD12_4164 NZ_JJLK01000083.1 Protein Homology CDS 27973 29517 . + 0 ID=cds-WP_000116565.1;Parent=gene-AD12_RS03450;Dbxref=GenBank:WP_000116565.1;Name=WP_000116565.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AD12_RS03450;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116565.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 29551 30810 . + . ID=gene-AD12_RS03445;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AD12_RS03445;old_locus_tag=AD12_4165 NZ_JJLK01000083.1 Protein Homology CDS 29551 30810 . + 0 ID=cds-WP_000196256.1;Parent=gene-AD12_RS03445;Dbxref=GenBank:WP_000196256.1;Name=WP_000196256.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AD12_RS03445;product=murein hydrolase activator EnvC;protein_id=WP_000196256.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 30814 31773 . + . ID=gene-AD12_RS03440;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AD12_RS03440;old_locus_tag=AD12_4166 NZ_JJLK01000083.1 Protein Homology CDS 30814 31773 . + 0 ID=cds-WP_000483856.1;Parent=gene-AD12_RS03440;Dbxref=GenBank:WP_000483856.1;Name=WP_000483856.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=AD12_RS03440;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483856.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 31760 32794 . - . ID=gene-AD12_RS03435;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AD12_RS03435;old_locus_tag=AD12_4167 NZ_JJLK01000083.1 Protein Homology CDS 31760 32794 . - 0 ID=cds-WP_000982091.1;Parent=gene-AD12_RS03435;Dbxref=GenBank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AD12_RS03435;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 33033 34058 . - . ID=gene-AD12_RS03430;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AD12_RS03430;old_locus_tag=AD12_4168 NZ_JJLK01000083.1 Protein Homology CDS 33033 34058 . - 0 ID=cds-WP_000646014.1;Parent=gene-AD12_RS03430;Dbxref=GenBank:WP_000646014.1;Name=WP_000646014.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AD12_RS03430;product=L-threonine 3-dehydrogenase;protein_id=WP_000646014.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 34068 35264 . - . ID=gene-AD12_RS03425;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AD12_RS03425;old_locus_tag=AD12_4169 NZ_JJLK01000083.1 Protein Homology CDS 34068 35264 . - 0 ID=cds-WP_001213834.1;Parent=gene-AD12_RS03425;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AD12_RS03425;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 35478 36410 . + . ID=gene-AD12_RS03420;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AD12_RS03420;old_locus_tag=AD12_4170 NZ_JJLK01000083.1 Protein Homology CDS 35478 36410 . + 0 ID=cds-WP_000587749.1;Parent=gene-AD12_RS03420;Dbxref=GenBank:WP_000587749.1;Name=WP_000587749.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AD12_RS03420;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587749.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 36420 37466 . + . ID=gene-AD12_RS03415;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AD12_RS03415;old_locus_tag=AD12_4171 NZ_JJLK01000083.1 Protein Homology CDS 36420 37466 . + 0 ID=cds-WP_000699225.1;Parent=gene-AD12_RS03415;Dbxref=GenBank:WP_000699225.1;Name=WP_000699225.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709400.1;locus_tag=AD12_RS03415;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699225.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 37470 38441 . + . ID=gene-AD12_RS03410;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AD12_RS03410;old_locus_tag=AD12_4172 NZ_JJLK01000083.1 Protein Homology CDS 37470 38441 . + 0 ID=cds-WP_032286758.1;Parent=gene-AD12_RS03410;Dbxref=GenBank:WP_032286758.1;Name=WP_032286758.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244006.1;locus_tag=AD12_RS03410;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_032286758.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 38511 39764 . - . ID=gene-AD12_RS03405;Name=AD12_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03405;old_locus_tag=AD12_4173 NZ_JJLK01000083.1 Protein Homology CDS 38511 39764 . - 0 ID=cds-WP_001300719.1;Parent=gene-AD12_RS03405;Dbxref=GenBank:WP_001300719.1;Name=WP_001300719.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602581.1;locus_tag=AD12_RS03405;product=O-antigen ligase family protein;protein_id=WP_001300719.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 39810 40793 . - . ID=gene-AD12_RS03400;Name=AD12_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03400;old_locus_tag=AD12_4174 NZ_JJLK01000083.1 Protein Homology CDS 39810 40793 . - 0 ID=cds-WP_000063997.1;Parent=gene-AD12_RS03400;Dbxref=GenBank:WP_000063997.1;Name=WP_000063997.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246416.1;locus_tag=AD12_RS03400;product=glycosyltransferase family 2 protein;protein_id=WP_000063997.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 40878 41903 . - . ID=gene-AD12_RS03395;Name=AD12_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03395;old_locus_tag=AD12_4175 NZ_JJLK01000083.1 Protein Homology CDS 40878 41903 . - 0 ID=cds-WP_000364782.1;Parent=gene-AD12_RS03395;Dbxref=GenBank:WP_000364782.1;Name=WP_000364782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364797.1;locus_tag=AD12_RS03395;product=UDP-galactose--(galactosyl) LPS alpha1%2C2-galactosyltransferase;protein_id=WP_000364782.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 41929 42621 . - . ID=gene-AD12_RS03390;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AD12_RS03390;old_locus_tag=AD12_4176 NZ_JJLK01000083.1 Protein Homology CDS 41929 42621 . - 0 ID=cds-WP_000633087.1;Parent=gene-AD12_RS03390;Dbxref=GenBank:WP_000633087.1;Name=WP_000633087.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633080.1;locus_tag=AD12_RS03390;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000633087.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 42631 43626 . - . ID=gene-AD12_RS03385;Name=AD12_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03385;old_locus_tag=AD12_4177 NZ_JJLK01000083.1 Protein Homology CDS 42631 43626 . - 0 ID=cds-WP_001001724.1;Parent=gene-AD12_RS03385;Dbxref=GenBank:WP_001001724.1;Name=WP_001001724.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001722.1;locus_tag=AD12_RS03385;product=glycosyltransferase family 8 protein;protein_id=WP_001001724.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 43643 44659 . - . ID=gene-AD12_RS03380;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AD12_RS03380;old_locus_tag=AD12_4178 NZ_JJLK01000083.1 Protein Homology CDS 43643 44659 . - 0 ID=cds-WP_032286759.1;Parent=gene-AD12_RS03380;Dbxref=GenBank:WP_032286759.1;Name=WP_032286759.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=AD12_RS03380;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_032286759.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 44675 45472 . - . ID=gene-AD12_RS03375;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AD12_RS03375;old_locus_tag=AD12_4179 NZ_JJLK01000083.1 Protein Homology CDS 44675 45472 . - 0 ID=cds-WP_001295235.1;Parent=gene-AD12_RS03375;Dbxref=GenBank:WP_001295235.1;Name=WP_001295235.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AD12_RS03375;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001295235.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 45465 46589 . - . ID=gene-AD12_RS03370;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AD12_RS03370;old_locus_tag=AD12_4180 NZ_JJLK01000083.1 Protein Homology CDS 45465 46589 . - 0 ID=cds-WP_000634246.1;Parent=gene-AD12_RS03370;Dbxref=GenBank:WP_000634246.1;Name=WP_000634246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AD12_RS03370;product=glycosyltransferase family 4 protein;protein_id=WP_000634246.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 46586 47644 . - . ID=gene-AD12_RS03365;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AD12_RS03365;old_locus_tag=AD12_4181 NZ_JJLK01000083.1 Protein Homology CDS 46586 47644 . - 0 ID=cds-WP_000360402.1;Parent=gene-AD12_RS03365;Dbxref=GenBank:WP_000360402.1;Name=WP_000360402.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AD12_RS03365;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360402.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 48057 49334 . + . ID=gene-AD12_RS03360;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AD12_RS03360;old_locus_tag=AD12_4182 NZ_JJLK01000083.1 Protein Homology CDS 48057 49334 . + 0 ID=cds-WP_000891564.1;Parent=gene-AD12_RS03360;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AD12_RS03360;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 49342 49821 . + . ID=gene-AD12_RS03355;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AD12_RS03355;old_locus_tag=AD12_4183 NZ_JJLK01000083.1 Protein Homology CDS 49342 49821 . + 0 ID=cds-WP_001171866.1;Parent=gene-AD12_RS03355;Dbxref=GenBank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AD12_RS03355;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 49860 50669 . - . ID=gene-AD12_RS03350;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AD12_RS03350;old_locus_tag=AD12_4184 NZ_JJLK01000083.1 Protein Homology CDS 49860 50669 . - 0 ID=cds-WP_001114533.1;Parent=gene-AD12_RS03350;Dbxref=GenBank:WP_001114533.1;Name=WP_001114533.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AD12_RS03350;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114533.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 50767 50934 . - . ID=gene-AD12_RS03345;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AD12_RS03345;old_locus_tag=AD12_4185 NZ_JJLK01000083.1 Protein Homology CDS 50767 50934 . - 0 ID=cds-WP_001051798.1;Parent=gene-AD12_RS03345;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AD12_RS03345;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 50955 51191 . - . ID=gene-AD12_RS03340;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AD12_RS03340;old_locus_tag=AD12_4186 NZ_JJLK01000083.1 Protein Homology CDS 50955 51191 . - 0 ID=cds-WP_000091955.1;Parent=gene-AD12_RS03340;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AD12_RS03340;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 51408 52076 . - . ID=gene-AD12_RS03335;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AD12_RS03335;old_locus_tag=AD12_4187 NZ_JJLK01000083.1 Protein Homology CDS 51408 52076 . - 0 ID=cds-WP_001297375.1;Parent=gene-AD12_RS03335;Dbxref=GenBank:WP_001297375.1;Name=WP_001297375.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709417.4;locus_tag=AD12_RS03335;product=RadC family protein;protein_id=WP_001297375.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 52248 53468 . + . ID=gene-AD12_RS03330;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AD12_RS03330;old_locus_tag=AD12_4188 NZ_JJLK01000083.1 Protein Homology CDS 52248 53468 . + 0 ID=cds-WP_000050158.1;Parent=gene-AD12_RS03330;Dbxref=GenBank:WP_000050158.1;Name=WP_000050158.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AD12_RS03330;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050158.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 53446 53904 . + . ID=gene-AD12_RS03325;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AD12_RS03325;old_locus_tag=AD12_4189 NZ_JJLK01000083.1 Protein Homology CDS 53446 53904 . + 0 ID=cds-WP_000976070.1;Parent=gene-AD12_RS03325;Dbxref=GenBank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AD12_RS03325;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 54011 54607 . + . ID=gene-AD12_RS03320;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AD12_RS03320;old_locus_tag=AD12_4190 NZ_JJLK01000083.1 Protein Homology CDS 54011 54607 . + 0 ID=cds-WP_000818601.1;Parent=gene-AD12_RS03320;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AD12_RS03320;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 54653 55612 . - . ID=gene-AD12_RS03315;Name=AD12_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03315;old_locus_tag=AD12_4191 NZ_JJLK01000083.1 Protein Homology CDS 54653 55612 . - 0 ID=cds-WP_000340183.1;Parent=gene-AD12_RS03315;Dbxref=GenBank:WP_000340183.1;Name=WP_000340183.1;Ontology_term=GO:0006974,GO:0003723,GO:0003964,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA,metal ion binding|0046872||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000340179.1;locus_tag=AD12_RS03315;product=reverse transcriptase family protein;protein_id=WP_000340183.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 55910 56551 . - . ID=gene-AD12_RS03310;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AD12_RS03310;old_locus_tag=AD12_4192 NZ_JJLK01000083.1 Protein Homology CDS 55910 56551 . - 0 ID=cds-WP_000806173.1;Parent=gene-AD12_RS03310;Dbxref=GenBank:WP_000806173.1;Name=WP_000806173.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AD12_RS03310;product=orotate phosphoribosyltransferase;protein_id=WP_000806173.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 56617 57333 . - . ID=gene-AD12_RS03305;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AD12_RS03305;old_locus_tag=AD12_4193 NZ_JJLK01000083.1 Protein Homology CDS 56617 57333 . - 0 ID=cds-WP_001247089.1;Parent=gene-AD12_RS03305;Dbxref=GenBank:WP_001247089.1;Name=WP_001247089.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AD12_RS03305;product=ribonuclease PH;protein_id=WP_001247089.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 57460 58323 . + . ID=gene-AD12_RS03300;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AD12_RS03300;old_locus_tag=AD12_4194 NZ_JJLK01000083.1 Protein Homology CDS 57460 58323 . + 0 ID=cds-WP_000621336.1;Parent=gene-AD12_RS03300;Dbxref=GenBank:WP_000621336.1;Name=WP_000621336.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AD12_RS03300;product=YicC/YloC family endoribonuclease;protein_id=WP_000621336.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 58544 59146 . + . ID=gene-AD12_RS03295;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AD12_RS03295;old_locus_tag=AD12_4196 NZ_JJLK01000083.1 Protein Homology CDS 58544 59146 . + 0 ID=cds-WP_001356259.1;Parent=gene-AD12_RS03295;Dbxref=GenBank:WP_001356259.1;Name=WP_001356259.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418102.2;locus_tag=AD12_RS03295;product=DNA damage-inducible protein D;protein_id=WP_001356259.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 59437 60054 . + . ID=gene-AD12_RS03290;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AD12_RS03290;old_locus_tag=AD12_4197 NZ_JJLK01000083.1 Protein Homology CDS 59437 60054 . + 0 ID=cds-WP_000924289.1;Parent=gene-AD12_RS03290;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AD12_RS03290;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 60051 61733 . - . ID=gene-AD12_RS03285;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AD12_RS03285;old_locus_tag=AD12_4198 NZ_JJLK01000083.1 Protein Homology CDS 60051 61733 . - 0 ID=cds-WP_001384873.1;Parent=gene-AD12_RS03285;Dbxref=GenBank:WP_001384873.1;Name=WP_001384873.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AD12_RS03285;product=NAD-dependent DNA ligase LigB;protein_id=WP_001384873.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 61991 62614 . + . ID=gene-AD12_RS03280;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AD12_RS03280;old_locus_tag=AD12_4200 NZ_JJLK01000083.1 Protein Homology CDS 61991 62614 . + 0 ID=cds-WP_001295237.1;Parent=gene-AD12_RS03280;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AD12_RS03280;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 62669 62944 . + . ID=gene-AD12_RS03275;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AD12_RS03275;old_locus_tag=AD12_4201 NZ_JJLK01000083.1 Protein Homology CDS 62669 62944 . + 0 ID=cds-WP_000135058.1;Parent=gene-AD12_RS03275;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AD12_RS03275;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 62963 65071 . + . ID=gene-AD12_RS03270;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AD12_RS03270;old_locus_tag=AD12_4202 NZ_JJLK01000083.1 Protein Homology CDS 62963 65071 . + 0 ID=cds-WP_000280488.1;Parent=gene-AD12_RS03270;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AD12_RS03270;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 65078 65767 . + . ID=gene-AD12_RS03265;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AD12_RS03265;old_locus_tag=AD12_4203 NZ_JJLK01000083.1 Protein Homology CDS 65078 65767 . + 0 ID=cds-WP_001070177.1;Parent=gene-AD12_RS03265;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AD12_RS03265;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 65773 67854 . + . ID=gene-AD12_RS03260;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AD12_RS03260;old_locus_tag=AD12_4204 NZ_JJLK01000083.1 Protein Homology CDS 65773 67854 . + 0 ID=cds-WP_032286760.1;Parent=gene-AD12_RS03260;Dbxref=GenBank:WP_032286760.1;Name=WP_032286760.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709432.2;locus_tag=AD12_RS03260;product=ATP-dependent DNA helicase RecG;protein_id=WP_032286760.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 67839 68705 . - . ID=gene-AD12_RS28920;Name=AD12_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28920;old_locus_tag=AD12_4205 NZ_JJLK01000083.1 Protein Homology CDS 67839 68705 . - 0 ID=cds-WP_000747329.1;Parent=gene-AD12_RS28920;Dbxref=GenBank:WP_000747329.1;Name=WP_000747329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312555.2;locus_tag=AD12_RS28920;product=hypothetical protein;protein_id=WP_000747329.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 68708 69913 . - . ID=gene-AD12_RS03250;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AD12_RS03250;old_locus_tag=AD12_4206 NZ_JJLK01000083.1 Protein Homology CDS 68708 69913 . - 0 ID=cds-WP_000468836.1;Parent=gene-AD12_RS03250;Dbxref=GenBank:WP_000468836.1;Name=WP_000468836.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312556.1;locus_tag=AD12_RS03250;product=sodium/glutamate symporter;protein_id=WP_000468836.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 70193 71584 . + . ID=gene-AD12_RS03245;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AD12_RS03245;old_locus_tag=AD12_4207 NZ_JJLK01000083.1 Protein Homology CDS 70193 71584 . + 0 ID=cds-WP_001297380.1;Parent=gene-AD12_RS03245;Dbxref=GenBank:WP_001297380.1;Name=WP_001297380.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AD12_RS03245;product=xanthine/proton symporter XanP;protein_id=WP_001297380.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 71705 73414 . + . ID=gene-AD12_RS03240;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AD12_RS03240;old_locus_tag=AD12_4208 NZ_JJLK01000083.1 Protein Homology CDS 71705 73414 . + 0 ID=cds-WP_001325853.1;Parent=gene-AD12_RS03240;Dbxref=GenBank:WP_001325853.1;Name=WP_001325853.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312558.1;locus_tag=AD12_RS03240;product=AsmA family protein;protein_id=WP_001325853.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 73466 75784 . - . ID=gene-AD12_RS03235;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AD12_RS03235;old_locus_tag=AD12_4209 NZ_JJLK01000083.1 Protein Homology CDS 73466 75784 . - 0 ID=cds-WP_000702973.1;Parent=gene-AD12_RS03235;Dbxref=GenBank:WP_000702973.1;Name=WP_000702973.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AD12_RS03235;product=alpha-xylosidase;protein_id=WP_000702973.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 75794 77176 . - . ID=gene-AD12_RS03230;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AD12_RS03230;old_locus_tag=AD12_4210 NZ_JJLK01000083.1 Protein Homology CDS 75794 77176 . - 0 ID=cds-WP_000834439.1;Parent=gene-AD12_RS03230;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AD12_RS03230;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 77469 77563 . + . ID=gene-AD12_RS03225;Name=AD12_RS03225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS03225;old_locus_tag=AD12_4211 NZ_JJLK01000083.1 tRNAscan-SE tRNA 77469 77563 . + . ID=rna-AD12_RS03225;Parent=gene-AD12_RS03225;anticodon=(pos:77503..77505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS03225;product=tRNA-Sec NZ_JJLK01000083.1 tRNAscan-SE exon 77469 77563 . + . ID=exon-AD12_RS03225-1;Parent=rna-AD12_RS03225;anticodon=(pos:77503..77505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS03225;product=tRNA-Sec NZ_JJLK01000083.1 RefSeq gene 77726 78901 . + . ID=gene-AD12_RS03220;Name=AD12_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03220;old_locus_tag=AD12_4212 NZ_JJLK01000083.1 Protein Homology CDS 77726 78901 . + 0 ID=cds-WP_032286761.1;Parent=gene-AD12_RS03220;Dbxref=GenBank:WP_032286761.1;Name=WP_032286761.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218975.1;locus_tag=AD12_RS03220;product=tyrosine-type recombinase/integrase;protein_id=WP_032286761.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 78935 80698 . + . ID=gene-AD12_RS03215;Name=AD12_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03215;old_locus_tag=AD12_4213 NZ_JJLK01000083.1 Protein Homology CDS 78935 80698 . + 0 ID=cds-WP_021570265.1;Parent=gene-AD12_RS03215;Dbxref=GenBank:WP_021570265.1;Name=WP_021570265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160301.1;locus_tag=AD12_RS03215;product=P-loop NTPase fold protein;protein_id=WP_021570265.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 80960 81532 . - . ID=gene-AD12_RS03210;Name=AD12_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03210;old_locus_tag=AD12_4215 NZ_JJLK01000083.1 Protein Homology CDS 80960 81532 . - 0 ID=cds-WP_000446136.1;Parent=gene-AD12_RS03210;Dbxref=GenBank:WP_000446136.1;Name=WP_000446136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774583.1;locus_tag=AD12_RS03210;product=phage polarity suppression protein;protein_id=WP_000446136.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 81606 82106 . - . ID=gene-AD12_RS03205;Name=AD12_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03205;old_locus_tag=AD12_4216 NZ_JJLK01000083.1 Protein Homology CDS 81606 82106 . - 0 ID=cds-WP_000638635.1;Parent=gene-AD12_RS03205;Dbxref=GenBank:WP_000638635.1;Name=WP_000638635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405508.1;locus_tag=AD12_RS03205;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000638635.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 82103 82837 . - . ID=gene-AD12_RS03200;Name=AD12_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03200;old_locus_tag=AD12_4217 NZ_JJLK01000083.1 Protein Homology CDS 82103 82837 . - 0 ID=cds-WP_032286762.1;Parent=gene-AD12_RS03200;Dbxref=GenBank:WP_032286762.1;Name=WP_032286762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600374.1;locus_tag=AD12_RS03200;product=hypothetical protein;protein_id=WP_032286762.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 83390 83656 . + . ID=gene-AD12_RS03195;Name=AD12_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03195;old_locus_tag=AD12_4219 NZ_JJLK01000083.1 Protein Homology CDS 83390 83656 . + 0 ID=cds-WP_001149160.1;Parent=gene-AD12_RS03195;Dbxref=GenBank:WP_001149160.1;Name=WP_001149160.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015979398.1;locus_tag=AD12_RS03195;product=helix-turn-helix transcriptional regulator;protein_id=WP_001149160.1;transl_table=11 NZ_JJLK01000083.1 RefSeq pseudogene 83659 83985 . + . ID=gene-AD12_RS29940;Name=AD12_RS29940;end_range=83985,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29940;partial=true;pseudo=true NZ_JJLK01000083.1 Protein Homology CDS 83659 83985 . + 0 ID=cds-AD12_RS29940;Parent=gene-AD12_RS29940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=83985,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=AD12_RS29940;partial=true;product=ash family protein;pseudo=true;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 84010 84207 . + . ID=gene-AD12_RS29945;Name=AD12_RS29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29945;old_locus_tag=AD12_4220 NZ_JJLK01000083.1 Protein Homology CDS 84010 84207 . + 0 ID=cds-WP_001365039.1;Parent=gene-AD12_RS29945;Dbxref=GenBank:WP_001365039.1;Name=WP_001365039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033153.2;locus_tag=AD12_RS29945;product=host cell division inhibitor Icd-like protein;protein_id=WP_001365039.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 84200 84487 . + . ID=gene-AD12_RS03190;Name=AD12_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03190;old_locus_tag=AD12_4221 NZ_JJLK01000083.1 Protein Homology CDS 84200 84487 . + 0 ID=cds-WP_001244664.1;Parent=gene-AD12_RS03190;Dbxref=GenBank:WP_001244664.1;Name=WP_001244664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244665.1;locus_tag=AD12_RS03190;product=hypothetical protein;protein_id=WP_001244664.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 84480 84935 . + . ID=gene-AD12_RS03185;Name=AD12_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03185;old_locus_tag=AD12_4222 NZ_JJLK01000083.1 Protein Homology CDS 84480 84935 . + 0 ID=cds-WP_000459298.1;Parent=gene-AD12_RS03185;Dbxref=GenBank:WP_000459298.1;Name=WP_000459298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569899.1;locus_tag=AD12_RS03185;product=hypothetical protein;protein_id=WP_000459298.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 85071 85391 . + . ID=gene-AD12_RS03180;Name=AD12_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03180;old_locus_tag=AD12_4223 NZ_JJLK01000083.1 Protein Homology CDS 85071 85391 . + 0 ID=cds-WP_000856729.1;Parent=gene-AD12_RS03180;Dbxref=GenBank:WP_000856729.1;Name=WP_000856729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=AD12_RS03180;product=DUF5375 domain-containing protein;protein_id=WP_000856729.1;transl_table=11 NZ_JJLK01000083.1 RefSeq gene 85406 87739 . + . ID=gene-AD12_RS03175;Name=AD12_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03175;old_locus_tag=AD12_4224 NZ_JJLK01000083.1 Protein Homology CDS 85406 87739 . + 0 ID=cds-WP_032286764.1;Parent=gene-AD12_RS03175;Dbxref=GenBank:WP_032286764.1;Name=WP_032286764.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783677.1;locus_tag=AD12_RS03175;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_032286764.1;transl_table=11 ##sequence-region NZ_JJLK01000084.1 1 118214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000084.1 RefSeq region 1 118214 . + . ID=NZ_JJLK01000084.1:1..118214;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000084.1 RefSeq gene 116 688 . - . ID=gene-AD12_RS03170;Name=AD12_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03170;old_locus_tag=AD12_4226 NZ_JJLK01000084.1 Protein Homology CDS 116 688 . - 0 ID=cds-WP_000446136.1-2;Parent=gene-AD12_RS03170;Dbxref=GenBank:WP_000446136.1;Name=WP_000446136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774583.1;locus_tag=AD12_RS03170;product=phage polarity suppression protein;protein_id=WP_000446136.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 762 1262 . - . ID=gene-AD12_RS03165;Name=AD12_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03165;old_locus_tag=AD12_4227 NZ_JJLK01000084.1 Protein Homology CDS 762 1262 . - 0 ID=cds-WP_000638635.1-2;Parent=gene-AD12_RS03165;Dbxref=GenBank:WP_000638635.1;Name=WP_000638635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405508.1;locus_tag=AD12_RS03165;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000638635.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 1259 1993 . - . ID=gene-AD12_RS03160;Name=AD12_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03160;old_locus_tag=AD12_4228 NZ_JJLK01000084.1 Protein Homology CDS 1259 1993 . - 0 ID=cds-WP_032286762.1-2;Parent=gene-AD12_RS03160;Dbxref=GenBank:WP_032286762.1;Name=WP_032286762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600374.1;locus_tag=AD12_RS03160;product=hypothetical protein;protein_id=WP_032286762.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 2546 2812 . + . ID=gene-AD12_RS03155;Name=AD12_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03155;old_locus_tag=AD12_4230 NZ_JJLK01000084.1 Protein Homology CDS 2546 2812 . + 0 ID=cds-WP_001149160.1-2;Parent=gene-AD12_RS03155;Dbxref=GenBank:WP_001149160.1;Name=WP_001149160.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015979398.1;locus_tag=AD12_RS03155;product=helix-turn-helix transcriptional regulator;protein_id=WP_001149160.1;transl_table=11 NZ_JJLK01000084.1 RefSeq pseudogene 2815 3141 . + . ID=gene-AD12_RS29950;Name=AD12_RS29950;end_range=3141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29950;partial=true;pseudo=true NZ_JJLK01000084.1 Protein Homology CDS 2815 3141 . + 0 ID=cds-AD12_RS29950;Parent=gene-AD12_RS29950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3141,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=AD12_RS29950;partial=true;product=ash family protein;pseudo=true;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 3166 3363 . + . ID=gene-AD12_RS29955;Name=AD12_RS29955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29955;old_locus_tag=AD12_4231 NZ_JJLK01000084.1 Protein Homology CDS 3166 3363 . + 0 ID=cds-WP_001365039.1-2;Parent=gene-AD12_RS29955;Dbxref=GenBank:WP_001365039.1;Name=WP_001365039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033153.2;locus_tag=AD12_RS29955;product=host cell division inhibitor Icd-like protein;protein_id=WP_001365039.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 3356 3643 . + . ID=gene-AD12_RS03150;Name=AD12_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03150;old_locus_tag=AD12_4232 NZ_JJLK01000084.1 Protein Homology CDS 3356 3643 . + 0 ID=cds-WP_001244664.1-2;Parent=gene-AD12_RS03150;Dbxref=GenBank:WP_001244664.1;Name=WP_001244664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244665.1;locus_tag=AD12_RS03150;product=hypothetical protein;protein_id=WP_001244664.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 3636 4091 . + . ID=gene-AD12_RS03145;Name=AD12_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03145;old_locus_tag=AD12_4233 NZ_JJLK01000084.1 Protein Homology CDS 3636 4091 . + 0 ID=cds-WP_000459298.1-2;Parent=gene-AD12_RS03145;Dbxref=GenBank:WP_000459298.1;Name=WP_000459298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569899.1;locus_tag=AD12_RS03145;product=hypothetical protein;protein_id=WP_000459298.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 4227 4547 . + . ID=gene-AD12_RS03140;Name=AD12_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03140;old_locus_tag=AD12_4234 NZ_JJLK01000084.1 Protein Homology CDS 4227 4547 . + 0 ID=cds-WP_000856729.1-2;Parent=gene-AD12_RS03140;Dbxref=GenBank:WP_000856729.1;Name=WP_000856729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=AD12_RS03140;product=DUF5375 domain-containing protein;protein_id=WP_000856729.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 4562 6895 . + . ID=gene-AD12_RS03135;Name=AD12_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03135;old_locus_tag=AD12_4235 NZ_JJLK01000084.1 Protein Homology CDS 4562 6895 . + 0 ID=cds-WP_032286764.1-2;Parent=gene-AD12_RS03135;Dbxref=GenBank:WP_032286764.1;Name=WP_032286764.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783677.1;locus_tag=AD12_RS03135;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_032286764.1;transl_table=11 NZ_JJLK01000084.1 RefSeq pseudogene 7470 7598 . + . ID=gene-AD12_RS03130;Name=rhuM;end_range=7598,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AD12_RS03130;old_locus_tag=AD12_4237;partial=true;pseudo=true;start_range=.,7470 NZ_JJLK01000084.1 Protein Homology CDS 7470 7598 . + 0 ID=cds-AD12_RS03130;Parent=gene-AD12_RS03130;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7598,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=AD12_RS03130;partial=true;product=RhuM family protein;pseudo=true;start_range=.,7470;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 8028 9212 . + . ID=gene-AD12_RS03125;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AD12_RS03125;old_locus_tag=AD12_4238 NZ_JJLK01000084.1 Protein Homology CDS 8028 9212 . + 0 ID=cds-WP_001172877.1;Parent=gene-AD12_RS03125;Dbxref=GenBank:WP_001172877.1;Name=WP_001172877.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AD12_RS03125;product=sugar efflux transporter;protein_id=WP_001172877.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 9323 10246 . + . ID=gene-AD12_RS03120;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AD12_RS03120;old_locus_tag=AD12_4239 NZ_JJLK01000084.1 Protein Homology CDS 9323 10246 . + 0 ID=cds-WP_000535960.1;Parent=gene-AD12_RS03120;Dbxref=GenBank:WP_000535960.1;Name=WP_000535960.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AD12_RS03120;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535960.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 10250 11068 . - . ID=gene-AD12_RS03115;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AD12_RS03115;old_locus_tag=AD12_4240 NZ_JJLK01000084.1 Protein Homology CDS 10250 11068 . - 0 ID=cds-WP_000779432.1;Parent=gene-AD12_RS03115;Dbxref=GenBank:WP_000779432.1;Name=WP_000779432.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AD12_RS03115;product=lipoprotein NlpA;protein_id=WP_000779432.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 11290 11583 . + . ID=gene-AD12_RS03110;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AD12_RS03110;old_locus_tag=AD12_4241 NZ_JJLK01000084.1 Protein Homology CDS 11290 11583 . + 0 ID=cds-WP_000805509.1;Parent=gene-AD12_RS03110;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AD12_RS03110;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 11624 12814 . - . ID=gene-AD12_RS03105;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AD12_RS03105;old_locus_tag=AD12_4242 NZ_JJLK01000084.1 Protein Homology CDS 11624 12814 . - 0 ID=cds-WP_001288553.1;Parent=gene-AD12_RS03105;Dbxref=GenBank:WP_001288553.1;Name=WP_001288553.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AD12_RS03105;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288553.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 13025 13477 . - . ID=gene-AD12_RS03100;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AD12_RS03100;old_locus_tag=AD12_4243 NZ_JJLK01000084.1 Protein Homology CDS 13025 13477 . - 0 ID=cds-WP_001300927.1;Parent=gene-AD12_RS03100;Dbxref=GenBank:WP_001300927.1;Name=WP_001300927.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AD12_RS03100;product=DUF1198 domain-containing protein;protein_id=WP_001300927.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 13530 14864 . - . ID=gene-AD12_RS03095;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AD12_RS03095;old_locus_tag=AD12_4244 NZ_JJLK01000084.1 Protein Homology CDS 13530 14864 . - 0 ID=cds-WP_001058151.1;Parent=gene-AD12_RS03095;Dbxref=GenBank:WP_001058151.1;Name=WP_001058151.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AD12_RS03095;product=adenine permease AdeQ;protein_id=WP_001058151.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 15039 16805 . + . ID=gene-AD12_RS03090;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AD12_RS03090;old_locus_tag=AD12_4245 NZ_JJLK01000084.1 Protein Homology CDS 15039 16805 . + 0 ID=cds-WP_001065695.1;Parent=gene-AD12_RS03090;Dbxref=GenBank:WP_001065695.1;Name=WP_001065695.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AD12_RS03090;product=adenine deaminase;protein_id=WP_001065695.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 16850 18241 . - . ID=gene-AD12_RS03085;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AD12_RS03085;old_locus_tag=AD12_4246 NZ_JJLK01000084.1 Protein Homology CDS 16850 18241 . - 0 ID=cds-WP_000879194.1;Parent=gene-AD12_RS03085;Dbxref=GenBank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AD12_RS03085;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 18379 19698 . - . ID=gene-AD12_RS03080;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AD12_RS03080;old_locus_tag=AD12_4247 NZ_JJLK01000084.1 Protein Homology CDS 18379 19698 . - 0 ID=cds-WP_000936566.1;Parent=gene-AD12_RS03080;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AD12_RS03080;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 19708 21210 . - . ID=gene-AD12_RS03075;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AD12_RS03075;old_locus_tag=AD12_4248 NZ_JJLK01000084.1 Protein Homology CDS 19708 21210 . - 0 ID=cds-WP_001295243.1;Parent=gene-AD12_RS03075;Dbxref=GenBank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AD12_RS03075;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 21210 21800 . - . ID=gene-AD12_RS03070;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AD12_RS03070;old_locus_tag=AD12_4249 NZ_JJLK01000084.1 Protein Homology CDS 21210 21800 . - 0 ID=cds-WP_000633668.1;Parent=gene-AD12_RS03070;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AD12_RS03070;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 21875 22165 . - . ID=gene-AD12_RS03065;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD12_RS03065;old_locus_tag=AD12_4250 NZ_JJLK01000084.1 Protein Homology CDS 21875 22165 . - 0 ID=cds-WP_001181706.1;Parent=gene-AD12_RS03065;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AD12_RS03065;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 22169 23857 . - . ID=gene-AD12_RS03060;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AD12_RS03060;old_locus_tag=AD12_4251 NZ_JJLK01000084.1 Protein Homology CDS 22169 23857 . - 0 ID=cds-WP_000168480.1;Parent=gene-AD12_RS03060;Dbxref=GenBank:WP_000168480.1;Name=WP_000168480.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AD12_RS03060;product=acetolactate synthase large subunit;protein_id=WP_000168480.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 23963 24061 . - . ID=gene-AD12_RS0125250;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AD12_RS0125250 NZ_JJLK01000084.1 Protein Homology CDS 23963 24061 . - 0 ID=cds-WP_001315912.1;Parent=gene-AD12_RS0125250;Dbxref=GenBank:WP_001315912.1;Name=WP_001315912.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AD12_RS0125250;product=ilvB operon leader peptide IvbL;protein_id=WP_001315912.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 24626 24715 . + . ID=gene-AD12_RS0125260;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AD12_RS0125260 NZ_JJLK01000084.1 Protein Homology CDS 24626 24715 . + 0 ID=cds-WP_000060506.1;Parent=gene-AD12_RS0125260;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AD12_RS0125260;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 24978 25052 . - . ID=gene-AD12_RS29325;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AD12_RS29325 NZ_JJLK01000084.1 Protein Homology CDS 24978 25052 . - 0 ID=cds-WP_211180519.1;Parent=gene-AD12_RS29325;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AD12_RS29325;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 25134 26318 . + . ID=gene-AD12_RS03050;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AD12_RS03050;old_locus_tag=AD12_4253 NZ_JJLK01000084.1 Protein Homology CDS 25134 26318 . + 0 ID=cds-WP_000828746.1;Parent=gene-AD12_RS03050;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AD12_RS03050;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 26326 26823 . - . ID=gene-AD12_RS03045;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AD12_RS03045;old_locus_tag=AD12_4254 NZ_JJLK01000084.1 Protein Homology CDS 26326 26823 . - 0 ID=cds-WP_000148063.1;Parent=gene-AD12_RS03045;Dbxref=GenBank:WP_000148063.1;Name=WP_000148063.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709521.1;locus_tag=AD12_RS03045;product=radical SAM protein;protein_id=WP_000148063.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 26820 27182 . - . ID=gene-AD12_RS03040;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AD12_RS03040;old_locus_tag=AD12_4255 NZ_JJLK01000084.1 Protein Homology CDS 26820 27182 . - 0 ID=cds-WP_001113432.1;Parent=gene-AD12_RS03040;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AD12_RS03040;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 27172 27519 . - . ID=gene-AD12_RS03035;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AD12_RS03035;old_locus_tag=AD12_4256 NZ_JJLK01000084.1 Protein Homology CDS 27172 27519 . - 0 ID=cds-WP_000703959.1;Parent=gene-AD12_RS03035;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AD12_RS03035;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 27629 28078 . + . ID=gene-AD12_RS0125265;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AD12_RS0125265;old_locus_tag=AD12_4257 NZ_JJLK01000084.1 Protein Homology CDS 27629 28078 . + 0 ID=cds-WP_000511287.1;Parent=gene-AD12_RS0125265;Dbxref=GenBank:WP_000511287.1;Name=WP_000511287.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AD12_RS0125265;product=protein YidI;protein_id=WP_000511287.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 28125 29618 . - . ID=gene-AD12_RS03030;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AD12_RS03030;old_locus_tag=AD12_4258 NZ_JJLK01000084.1 Protein Homology CDS 28125 29618 . - 0 ID=cds-WP_000828483.1;Parent=gene-AD12_RS03030;Dbxref=GenBank:WP_000828483.1;Name=WP_000828483.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AD12_RS03030;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828483.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 29615 31330 . - . ID=gene-AD12_RS03025;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AD12_RS03025;old_locus_tag=AD12_4259 NZ_JJLK01000084.1 Protein Homology CDS 29615 31330 . - 0 ID=cds-WP_001087147.1;Parent=gene-AD12_RS03025;Dbxref=GenBank:WP_001087147.1;Name=WP_001087147.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AD12_RS03025;product=solute:sodium symporter family transporter;protein_id=WP_001087147.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 31497 32390 . + . ID=gene-AD12_RS03020;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AD12_RS03020;old_locus_tag=AD12_4260 NZ_JJLK01000084.1 Protein Homology CDS 31497 32390 . + 0 ID=cds-WP_001013540.1;Parent=gene-AD12_RS03020;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AD12_RS03020;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JJLK01000084.1 RefSeq pseudogene 32387 33201 . - . ID=gene-AD12_RS03015;Name=AD12_RS03015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS03015;old_locus_tag=AD12_4261;pseudo=true NZ_JJLK01000084.1 Protein Homology CDS 32387 33201 . - 0 ID=cds-AD12_RS03015;Parent=gene-AD12_RS03015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AD12_RS03015;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 33201 34817 . - . ID=gene-AD12_RS03010;Name=AD12_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS03010;old_locus_tag=AD12_4262 NZ_JJLK01000084.1 Protein Homology CDS 33201 34817 . - 0 ID=cds-WP_032286766.1;Parent=gene-AD12_RS03010;Dbxref=GenBank:WP_032286766.1;Name=WP_032286766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AD12_RS03010;product=PTS sugar transporter subunit IIB;protein_id=WP_032286766.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 35113 35829 . + . ID=gene-AD12_RS0125270;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AD12_RS0125270 NZ_JJLK01000084.1 Protein Homology CDS 35113 35829 . + 0 ID=cds-WP_001300779.1;Parent=gene-AD12_RS0125270;Dbxref=GenBank:WP_001300779.1;Name=WP_001300779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AD12_RS0125270;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 35826 37487 . - . ID=gene-AD12_RS03005;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AD12_RS03005;old_locus_tag=AD12_4264 NZ_JJLK01000084.1 Protein Homology CDS 35826 37487 . - 0 ID=cds-WP_001279752.1;Parent=gene-AD12_RS03005;Dbxref=GenBank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AD12_RS03005;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 37684 38112 . - . ID=gene-AD12_RS03000;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AD12_RS03000;old_locus_tag=AD12_4265 NZ_JJLK01000084.1 Protein Homology CDS 37684 38112 . - 0 ID=cds-WP_001243431.1;Parent=gene-AD12_RS03000;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AD12_RS03000;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 38224 38637 . - . ID=gene-AD12_RS02995;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AD12_RS02995;old_locus_tag=AD12_4266 NZ_JJLK01000084.1 Protein Homology CDS 38224 38637 . - 0 ID=cds-WP_001243437.1;Parent=gene-AD12_RS02995;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AD12_RS02995;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JJLK01000084.1 cmsearch sequence_feature 38631 38703 . - . ID=id-NZ_JJLK01000084.1:38631..38703;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLK01000084.1 RefSeq gene 38943 39275 . + . ID=gene-AD12_RS0125275;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AD12_RS0125275 NZ_JJLK01000084.1 Protein Homology CDS 38943 39275 . + 0 ID=cds-WP_000620888.1;Parent=gene-AD12_RS0125275;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AD12_RS0125275;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 39277 40491 . - . ID=gene-AD12_RS02990;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AD12_RS02990;old_locus_tag=AD12_4269 NZ_JJLK01000084.1 Protein Homology CDS 39277 40491 . - 0 ID=cds-WP_001295245.1;Parent=gene-AD12_RS02990;Dbxref=GenBank:WP_001295245.1;Name=WP_001295245.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AD12_RS02990;product=DUF3748 domain-containing protein;protein_id=WP_001295245.1;transl_table=11 NZ_JJLK01000084.1 RefSeq pseudogene 40592 41656 . + . ID=gene-AD12_RS0125280;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=pseudogene;locus_tag=AD12_RS0125280;pseudo=true NZ_JJLK01000084.1 Protein Homology CDS 40592 41656 . + 0 ID=cds-AD12_RS0125280;Parent=gene-AD12_RS0125280;Note=internal stop;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AD12_RS0125280;product=colicin M resistance lipid reductase CbrA;pseudo=true;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 41653 42990 . - . ID=gene-AD12_RS02985;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AD12_RS02985;old_locus_tag=AD12_4272 NZ_JJLK01000084.1 Protein Homology CDS 41653 42990 . - 0 ID=cds-WP_000253455.1;Parent=gene-AD12_RS02985;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AD12_RS02985;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 43065 44213 . - . ID=gene-AD12_RS02980;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AD12_RS02980;old_locus_tag=AD12_4273 NZ_JJLK01000084.1 Protein Homology CDS 43065 44213 . - 0 ID=cds-WP_000705001.1;Parent=gene-AD12_RS02980;Dbxref=GenBank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AD12_RS02980;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 44210 44827 . - . ID=gene-AD12_RS02975;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AD12_RS02975;old_locus_tag=AD12_4274 NZ_JJLK01000084.1 Protein Homology CDS 44210 44827 . - 0 ID=cds-WP_001198699.1;Parent=gene-AD12_RS02975;Dbxref=GenBank:WP_001198699.1;Name=WP_001198699.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AD12_RS02975;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198699.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 44811 45689 . - . ID=gene-AD12_RS02970;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AD12_RS02970;old_locus_tag=AD12_4275 NZ_JJLK01000084.1 Protein Homology CDS 44811 45689 . - 0 ID=cds-WP_000127105.1;Parent=gene-AD12_RS02970;Dbxref=GenBank:WP_000127105.1;Name=WP_000127105.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709506.1;locus_tag=AD12_RS02970;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127105.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 45686 46375 . - . ID=gene-AD12_RS02965;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AD12_RS02965;old_locus_tag=AD12_4276 NZ_JJLK01000084.1 Protein Homology CDS 45686 46375 . - 0 ID=cds-WP_000174305.1;Parent=gene-AD12_RS02965;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AD12_RS02965;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 46653 47309 . + . ID=gene-AD12_RS02960;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AD12_RS02960;old_locus_tag=AD12_4277 NZ_JJLK01000084.1 Protein Homology CDS 46653 47309 . + 0 ID=cds-WP_000772934.1;Parent=gene-AD12_RS02960;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AD12_RS02960;product=protein YidX;protein_id=WP_000772934.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 47355 48167 . - . ID=gene-AD12_RS02955;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AD12_RS02955;old_locus_tag=AD12_4278 NZ_JJLK01000084.1 Protein Homology CDS 47355 48167 . - 0 ID=cds-WP_000985549.1;Parent=gene-AD12_RS02955;Dbxref=GenBank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AD12_RS02955;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 48282 48680 . - . ID=gene-AD12_RS02950;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AD12_RS02950;old_locus_tag=AD12_4279 NZ_JJLK01000084.1 Protein Homology CDS 48282 48680 . - 0 ID=cds-WP_000522208.1;Parent=gene-AD12_RS02950;Dbxref=GenBank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AD12_RS02950;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 48920 51334 . - . ID=gene-AD12_RS02945;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AD12_RS02945;old_locus_tag=AD12_4280 NZ_JJLK01000084.1 Protein Homology CDS 48920 51334 . - 0 ID=cds-WP_001508092.1;Parent=gene-AD12_RS02945;Dbxref=GenBank:WP_001508092.1;Name=WP_001508092.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AD12_RS02945;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001508092.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 51363 52436 . - . ID=gene-AD12_RS02940;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AD12_RS02940;old_locus_tag=AD12_4281 NZ_JJLK01000084.1 Protein Homology CDS 51363 52436 . - 0 ID=cds-WP_000060112.1;Parent=gene-AD12_RS02940;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AD12_RS02940;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 52436 53536 . - . ID=gene-AD12_RS02935;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AD12_RS02935;old_locus_tag=AD12_4282 NZ_JJLK01000084.1 Protein Homology CDS 52436 53536 . - 0 ID=cds-WP_000673464.1;Parent=gene-AD12_RS02935;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AD12_RS02935;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 53541 54944 . - . ID=gene-AD12_RS02930;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AD12_RS02930;old_locus_tag=AD12_4283 NZ_JJLK01000084.1 Protein Homology CDS 53541 54944 . - 0 ID=cds-WP_000059111.1;Parent=gene-AD12_RS02930;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AD12_RS02930;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 55241 55321 . + . ID=gene-AD12_RS28925;Name=AD12_RS28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28925 NZ_JJLK01000084.1 Protein Homology CDS 55241 55321 . + 0 ID=cds-WP_120795392.1;Parent=gene-AD12_RS28925;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AD12_RS28925;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 55551 55691 . + . ID=gene-AD12_RS02925;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AD12_RS02925;old_locus_tag=AD12_4284 NZ_JJLK01000084.1 Protein Homology CDS 55551 55691 . + 0 ID=cds-WP_000831330.1;Parent=gene-AD12_RS02925;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AD12_RS02925;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 55708 56067 . + . ID=gene-AD12_RS0125290;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AD12_RS0125290 NZ_JJLK01000084.1 Protein Homology CDS 55708 56067 . + 0 ID=cds-WP_000239730.1;Parent=gene-AD12_RS0125290;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AD12_RS0125290;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 56031 56288 . + . ID=gene-AD12_RS0125295;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AD12_RS0125295 NZ_JJLK01000084.1 Protein Homology CDS 56031 56288 . + 0 ID=cds-WP_001307474.1;Parent=gene-AD12_RS0125295;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AD12_RS0125295;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 56291 57937 . + . ID=gene-AD12_RS02920;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AD12_RS02920;old_locus_tag=AD12_4286 NZ_JJLK01000084.1 Protein Homology CDS 56291 57937 . + 0 ID=cds-WP_000378258.1;Parent=gene-AD12_RS02920;Dbxref=GenBank:WP_000378258.1;Name=WP_000378258.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312667.1;locus_tag=AD12_RS02920;product=membrane protein insertase YidC;protein_id=WP_000378258.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 58043 59407 . + . ID=gene-AD12_RS02915;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AD12_RS02915;old_locus_tag=AD12_4287 NZ_JJLK01000084.1 Protein Homology CDS 58043 59407 . + 0 ID=cds-WP_001282361.1;Parent=gene-AD12_RS02915;Dbxref=GenBank:WP_001282361.1;Name=WP_001282361.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AD12_RS02915;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282361.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 59650 59724 . + . ID=gene-AD12_RS0125300;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AD12_RS0125300 NZ_JJLK01000084.1 Protein Homology CDS 59650 59724 . + 0 ID=cds-WP_001364348.1;Parent=gene-AD12_RS0125300;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AD12_RS0125300;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 59945 61360 . + . ID=gene-AD12_RS02910;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AD12_RS02910;old_locus_tag=AD12_4288 NZ_JJLK01000084.1 Protein Homology CDS 59945 61360 . + 0 ID=cds-WP_001295247.1;Parent=gene-AD12_RS02910;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AD12_RS02910;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 61451 62698 . + . ID=gene-AD12_RS02905;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AD12_RS02905;old_locus_tag=AD12_4289 NZ_JJLK01000084.1 Protein Homology CDS 61451 62698 . + 0 ID=cds-WP_000131902.1;Parent=gene-AD12_RS02905;Dbxref=GenBank:WP_000131902.1;Name=WP_000131902.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AD12_RS02905;product=low affinity tryptophan permease TnaB;protein_id=WP_000131902.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 62831 64006 . + . ID=gene-AD12_RS02900;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AD12_RS02900;old_locus_tag=AD12_4290 NZ_JJLK01000084.1 Protein Homology CDS 62831 64006 . + 0 ID=cds-WP_032286767.1;Parent=gene-AD12_RS02900;Dbxref=GenBank:WP_032286767.1;Name=WP_032286767.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AD12_RS02900;product=multidrug efflux MFS transporter MdtL;protein_id=WP_032286767.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 63981 64940 . + . ID=gene-AD12_RS02895;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AD12_RS02895;old_locus_tag=AD12_4291 NZ_JJLK01000084.1 Protein Homology CDS 63981 64940 . + 0 ID=cds-WP_001323700.1;Parent=gene-AD12_RS02895;Dbxref=GenBank:WP_001323700.1;Name=WP_001323700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312675.1;locus_tag=AD12_RS02895;product=HTH-type transcriptional regulator YidZ;protein_id=WP_001323700.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 65097 65846 . + . ID=gene-AD12_RS02890;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AD12_RS02890;old_locus_tag=AD12_4292 NZ_JJLK01000084.1 Protein Homology CDS 65097 65846 . + 0 ID=cds-WP_001315916.1;Parent=gene-AD12_RS02890;Dbxref=GenBank:WP_001315916.1;Name=WP_001315916.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AD12_RS02890;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001315916.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 65868 66434 . + . ID=gene-AD12_RS02885;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AD12_RS02885;old_locus_tag=AD12_4293 NZ_JJLK01000084.1 Protein Homology CDS 65868 66434 . + 0 ID=cds-WP_001291123.1;Parent=gene-AD12_RS02885;Dbxref=GenBank:WP_001291123.1;Name=WP_001291123.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AD12_RS02885;product=class I chromate reductase YieF;protein_id=WP_001291123.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 66488 67825 . - . ID=gene-AD12_RS02880;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AD12_RS02880;old_locus_tag=AD12_4294 NZ_JJLK01000084.1 Protein Homology CDS 66488 67825 . - 0 ID=cds-WP_032286768.1;Parent=gene-AD12_RS02880;Dbxref=GenBank:WP_032286768.1;Name=WP_032286768.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AD12_RS02880;product=adenine permease AdeP;protein_id=WP_032286768.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 67992 68657 . + . ID=gene-AD12_RS02875;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AD12_RS02875;old_locus_tag=AD12_4295 NZ_JJLK01000084.1 Protein Homology CDS 67992 68657 . + 0 ID=cds-WP_000078043.1;Parent=gene-AD12_RS02875;Dbxref=GenBank:WP_000078043.1;Name=WP_000078043.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AD12_RS02875;product=6-phosphogluconate phosphatase;protein_id=WP_000078043.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 68724 69197 . + . ID=gene-AD12_RS0125305;Name=AD12_RS0125305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125305 NZ_JJLK01000084.1 Protein Homology CDS 68724 69197 . + 0 ID=cds-WP_032278554.1;Parent=gene-AD12_RS0125305;Dbxref=GenBank:WP_032278554.1;Name=WP_032278554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AD12_RS0125305;product=hypothetical protein;protein_id=WP_032278554.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 69246 69833 . + . ID=gene-AD12_RS02870;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;locus_tag=AD12_RS02870;old_locus_tag=AD12_4297 NZ_JJLK01000084.1 Protein Homology CDS 69246 69833 . + 0 ID=cds-WP_000193071.1;Parent=gene-AD12_RS02870;Dbxref=GenBank:WP_000193071.1;Name=WP_000193071.1;Ontology_term=GO:0030153;gbkey=CDS;gene=cbrC;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=AD12_RS02870;product=PF03691 family colicin E2 tolerance protein CbrC;protein_id=WP_000193071.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 69895 70617 . - . ID=gene-AD12_RS02865;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=AD12_RS02865;old_locus_tag=AD12_4298 NZ_JJLK01000084.1 Protein Homology CDS 69895 70617 . - 0 ID=cds-WP_000766900.1;Parent=gene-AD12_RS02865;Dbxref=GenBank:WP_000766900.1;Name=WP_000766900.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026242.1;locus_tag=AD12_RS02865;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766900.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 70632 71801 . - . ID=gene-AD12_RS02860;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=AD12_RS02860;old_locus_tag=AD12_4299 NZ_JJLK01000084.1 Protein Homology CDS 70632 71801 . - 0 ID=cds-WP_001295249.1;Parent=gene-AD12_RS02860;Dbxref=GenBank:WP_001295249.1;Name=WP_001295249.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AD12_RS02860;product=esterase;protein_id=WP_001295249.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 71828 73444 . - . ID=gene-AD12_RS02855;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=AD12_RS02855;old_locus_tag=AD12_4300 NZ_JJLK01000084.1 Protein Homology CDS 71828 73444 . - 0 ID=cds-WP_032286769.1;Parent=gene-AD12_RS02855;Dbxref=GenBank:WP_032286769.1;Name=WP_032286769.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AD12_RS02855;product=carbohydrate-specific porin BglH;protein_id=WP_032286769.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 73530 74924 . - . ID=gene-AD12_RS02850;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AD12_RS02850;old_locus_tag=AD12_4301 NZ_JJLK01000084.1 Protein Homology CDS 73530 74924 . - 0 ID=cds-WP_000643227.1;Parent=gene-AD12_RS02850;Dbxref=GenBank:WP_000643227.1;Name=WP_000643227.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469563.1;locus_tag=AD12_RS02850;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643227.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 74943 76820 . - . ID=gene-AD12_RS02845;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AD12_RS02845;old_locus_tag=AD12_4302 NZ_JJLK01000084.1 Protein Homology CDS 74943 76820 . - 0 ID=cds-WP_000137296.1;Parent=gene-AD12_RS02845;Dbxref=GenBank:WP_000137296.1;Name=WP_000137296.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AD12_RS02845;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_000137296.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 76953 77789 . - . ID=gene-AD12_RS02840;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AD12_RS02840;old_locus_tag=AD12_4303 NZ_JJLK01000084.1 Protein Homology CDS 76953 77789 . - 0 ID=cds-WP_032286771.1;Parent=gene-AD12_RS02840;Dbxref=GenBank:WP_032286771.1;Name=WP_032286771.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AD12_RS02840;product=transcriptional antiterminator BglG;protein_id=WP_032286771.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 78075 78800 . - . ID=gene-AD12_RS02835;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AD12_RS02835;old_locus_tag=AD12_4305 NZ_JJLK01000084.1 Protein Homology CDS 78075 78800 . - 0 ID=cds-WP_000377786.1;Parent=gene-AD12_RS02835;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AD12_RS02835;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 78815 79588 . - . ID=gene-AD12_RS02830;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AD12_RS02830;old_locus_tag=AD12_4306 NZ_JJLK01000084.1 Protein Homology CDS 78815 79588 . - 0 ID=cds-WP_000063125.1;Parent=gene-AD12_RS02830;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AD12_RS02830;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 79679 80569 . - . ID=gene-AD12_RS02825;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AD12_RS02825;old_locus_tag=AD12_4307 NZ_JJLK01000084.1 Protein Homology CDS 79679 80569 . - 0 ID=cds-WP_001251991.1;Parent=gene-AD12_RS02825;Dbxref=GenBank:WP_001251991.1;Name=WP_001251991.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AD12_RS02825;product=phosphate ABC transporter permease PstA;protein_id=WP_001251991.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 80569 81528 . - . ID=gene-AD12_RS02820;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AD12_RS02820;old_locus_tag=AD12_4308 NZ_JJLK01000084.1 Protein Homology CDS 80569 81528 . - 0 ID=cds-WP_000741620.1;Parent=gene-AD12_RS02820;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AD12_RS02820;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 81615 82655 . - . ID=gene-AD12_RS02815;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AD12_RS02815;old_locus_tag=AD12_4309 NZ_JJLK01000084.1 Protein Homology CDS 81615 82655 . - 0 ID=cds-WP_032286772.1;Parent=gene-AD12_RS02815;Dbxref=GenBank:WP_032286772.1;Name=WP_032286772.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AD12_RS02815;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_032286772.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 82903 83976 . - . ID=gene-AD12_RS02810;Name=lpfD-O113;gbkey=Gene;gene=lpfD-O113;gene_biotype=protein_coding;locus_tag=AD12_RS02810;old_locus_tag=AD12_4310 NZ_JJLK01000084.1 Protein Homology CDS 82903 83976 . - 0 ID=cds-WP_001046030.1;Parent=gene-AD12_RS02810;Dbxref=GenBank:WP_001046030.1;Name=WP_001046030.1;Note=LpfA-O113 is the major subunit of a form of long polar fimbria first described in LEE-negative%2C Shiga toxin-producing enterohemorrhagic Escherichia coli (STEC) of serotype O113:H21. This protein%2C designated LpfD-O113%2C is the minor subunit of this chaperone-usher type fimbrial system.;gbkey=CDS;gene=lpfD-O113;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685709.1;locus_tag=AD12_RS02810;product=long polar fimbrial minor subunit LpfD-O113;protein_id=WP_001046030.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 83987 86509 . - . ID=gene-AD12_RS02805;Name=lpfC-O113;gbkey=Gene;gene=lpfC-O113;gene_biotype=protein_coding;locus_tag=AD12_RS02805;old_locus_tag=AD12_4311 NZ_JJLK01000084.1 Protein Homology CDS 83987 86509 . - 0 ID=cds-WP_032286773.1;Parent=gene-AD12_RS02805;Dbxref=GenBank:WP_032286773.1;Name=WP_032286773.1;gbkey=CDS;gene=lpfC-O113;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709462.1;locus_tag=AD12_RS02805;product=long polar fimbrial usher protein LpfC-O113;protein_id=WP_032286773.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 86534 87265 . - . ID=gene-AD12_RS02800;Name=lpfB-O113;gbkey=Gene;gene=lpfB-O113;gene_biotype=protein_coding;locus_tag=AD12_RS02800;old_locus_tag=AD12_4312 NZ_JJLK01000084.1 Protein Homology CDS 86534 87265 . - 0 ID=cds-WP_000088114.1;Parent=gene-AD12_RS02800;Dbxref=GenBank:WP_000088114.1;Name=WP_000088114.1;gbkey=CDS;gene=lpfB-O113;inference=COORDINATES: similar to AA sequence:RefSeq:WP_316045823.1;locus_tag=AD12_RS02800;product=long polar fimbrial chaperone LpfB-O113;protein_id=WP_000088114.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 87313 87885 . - . ID=gene-AD12_RS02795;Name=lpfA-O113;gbkey=Gene;gene=lpfA-O113;gene_biotype=protein_coding;locus_tag=AD12_RS02795;old_locus_tag=AD12_4313 NZ_JJLK01000084.1 Protein Homology CDS 87313 87885 . - 0 ID=cds-WP_000827806.1;Parent=gene-AD12_RS02795;Dbxref=GenBank:WP_000827806.1;Name=WP_000827806.1;gbkey=CDS;gene=lpfA-O113;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709540.1;locus_tag=AD12_RS02795;product=long polar fimbria major subunit LpfA-O113;protein_id=WP_000827806.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 88187 90016 . - . ID=gene-AD12_RS02790;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AD12_RS02790;old_locus_tag=AD12_4314 NZ_JJLK01000084.1 Protein Homology CDS 88187 90016 . - 0 ID=cds-WP_000334099.1;Parent=gene-AD12_RS02790;Dbxref=GenBank:WP_000334099.1;Name=WP_000334099.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AD12_RS02790;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334099.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 90178 91548 . - . ID=gene-AD12_RS02785;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AD12_RS02785;old_locus_tag=AD12_4315 NZ_JJLK01000084.1 Protein Homology CDS 90178 91548 . - 0 ID=cds-WP_000933736.1;Parent=gene-AD12_RS02785;Dbxref=GenBank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AD12_RS02785;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 91899 92318 . - . ID=gene-AD12_RS02780;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AD12_RS02780;old_locus_tag=AD12_4316 NZ_JJLK01000084.1 Protein Homology CDS 91899 92318 . - 0 ID=cds-WP_001251965.1;Parent=gene-AD12_RS02780;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AD12_RS02780;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 92339 93721 . - . ID=gene-AD12_RS02775;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AD12_RS02775;old_locus_tag=AD12_4317 NZ_JJLK01000084.1 Protein Homology CDS 92339 93721 . - 0 ID=cds-WP_000190503.1;Parent=gene-AD12_RS02775;Dbxref=GenBank:WP_000190503.1;Name=WP_000190503.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AD12_RS02775;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190503.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 93748 94611 . - . ID=gene-AD12_RS02770;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AD12_RS02770;old_locus_tag=AD12_4318 NZ_JJLK01000084.1 Protein Homology CDS 93748 94611 . - 0 ID=cds-WP_000896498.1;Parent=gene-AD12_RS02770;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AD12_RS02770;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 94662 96203 . - . ID=gene-AD12_RS02765;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AD12_RS02765;old_locus_tag=AD12_4319 NZ_JJLK01000084.1 Protein Homology CDS 94662 96203 . - 0 ID=cds-WP_001176745.1;Parent=gene-AD12_RS02765;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AD12_RS02765;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 96216 96749 . - . ID=gene-AD12_RS02760;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AD12_RS02760;old_locus_tag=AD12_4320 NZ_JJLK01000084.1 Protein Homology CDS 96216 96749 . - 0 ID=cds-WP_001288587.1;Parent=gene-AD12_RS02760;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AD12_RS02760;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 96764 97234 . - . ID=gene-AD12_RS02755;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AD12_RS02755;old_locus_tag=AD12_4321 NZ_JJLK01000084.1 Protein Homology CDS 96764 97234 . - 0 ID=cds-WP_001052219.1;Parent=gene-AD12_RS02755;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AD12_RS02755;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 97296 97535 . - . ID=gene-AD12_RS02750;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AD12_RS02750;old_locus_tag=AD12_4322 NZ_JJLK01000084.1 Protein Homology CDS 97296 97535 . - 0 ID=cds-WP_000429386.1;Parent=gene-AD12_RS02750;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AD12_RS02750;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 97582 98397 . - . ID=gene-AD12_RS02745;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AD12_RS02745;old_locus_tag=AD12_4323 NZ_JJLK01000084.1 Protein Homology CDS 97582 98397 . - 0 ID=cds-WP_000135625.1;Parent=gene-AD12_RS02745;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AD12_RS02745;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 98406 98786 . - . ID=gene-AD12_RS0125310;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AD12_RS0125310 NZ_JJLK01000084.1 Protein Homology CDS 98406 98786 . - 0 ID=cds-WP_000116695.1;Parent=gene-AD12_RS0125310;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AD12_RS0125310;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 99403 100026 . - . ID=gene-AD12_RS02740;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AD12_RS02740;old_locus_tag=AD12_4325 NZ_JJLK01000084.1 Protein Homology CDS 99403 100026 . - 0 ID=cds-WP_000932839.1;Parent=gene-AD12_RS02740;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AD12_RS02740;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 100090 101979 . - . ID=gene-AD12_RS02735;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AD12_RS02735;old_locus_tag=AD12_4326 NZ_JJLK01000084.1 Protein Homology CDS 100090 101979 . - 0 ID=cds-WP_000499788.1;Parent=gene-AD12_RS02735;Dbxref=GenBank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AD12_RS02735;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 102358 102801 . - . ID=gene-AD12_RS02730;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AD12_RS02730;old_locus_tag=AD12_4327 NZ_JJLK01000084.1 Protein Homology CDS 102358 102801 . - 0 ID=cds-WP_000763729.1;Parent=gene-AD12_RS02730;Dbxref=GenBank:WP_000763729.1;Name=WP_000763729.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AD12_RS02730;product=FMN-binding protein MioC;protein_id=WP_000763729.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 102891 103349 . - . ID=gene-AD12_RS02725;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AD12_RS02725;old_locus_tag=AD12_4328 NZ_JJLK01000084.1 Protein Homology CDS 102891 103349 . - 0 ID=cds-WP_000432970.1;Parent=gene-AD12_RS02725;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AD12_RS02725;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 103501 104493 . + . ID=gene-AD12_RS02720;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AD12_RS02720;old_locus_tag=AD12_4329 NZ_JJLK01000084.1 Protein Homology CDS 103501 104493 . + 0 ID=cds-WP_000845141.1;Parent=gene-AD12_RS02720;Dbxref=GenBank:WP_000845141.1;Name=WP_000845141.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AD12_RS02720;product=aspartate--ammonia ligase;protein_id=WP_000845141.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 104498 105949 . - . ID=gene-AD12_RS02715;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AD12_RS02715;old_locus_tag=AD12_4330 NZ_JJLK01000084.1 Protein Homology CDS 104498 105949 . - 0 ID=cds-WP_000956642.1;Parent=gene-AD12_RS02715;Dbxref=GenBank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AD12_RS02715;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 105943 107439 . - . ID=gene-AD12_RS02710;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AD12_RS02710;old_locus_tag=AD12_4331 NZ_JJLK01000084.1 Protein Homology CDS 105943 107439 . - 0 ID=cds-WP_001299914.1;Parent=gene-AD12_RS02710;Dbxref=GenBank:WP_001299914.1;Name=WP_001299914.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AD12_RS02710;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 107662 109530 . + . ID=gene-AD12_RS02705;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AD12_RS02705;old_locus_tag=AD12_4332 NZ_JJLK01000084.1 Protein Homology CDS 107662 109530 . + 0 ID=cds-WP_000102319.1;Parent=gene-AD12_RS02705;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AD12_RS02705;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 109697 110116 . + . ID=gene-AD12_RS02700;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AD12_RS02700;old_locus_tag=AD12_4333 NZ_JJLK01000084.1 Protein Homology CDS 109697 110116 . + 0 ID=cds-WP_001364631.1;Parent=gene-AD12_RS02700;Dbxref=GenBank:WP_001364631.1;Name=WP_001364631.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=AD12_RS02700;product=D-ribose pyranase;protein_id=WP_001364631.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 110124 111629 . + . ID=gene-AD12_RS02695;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AD12_RS02695;old_locus_tag=AD12_4334 NZ_JJLK01000084.1 Protein Homology CDS 110124 111629 . + 0 ID=cds-WP_000387756.1;Parent=gene-AD12_RS02695;Dbxref=GenBank:WP_000387756.1;Name=WP_000387756.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AD12_RS02695;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387756.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 111634 112599 . + . ID=gene-AD12_RS02690;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AD12_RS02690;old_locus_tag=AD12_4335 NZ_JJLK01000084.1 Protein Homology CDS 111634 112599 . + 0 ID=cds-WP_000211858.1;Parent=gene-AD12_RS02690;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AD12_RS02690;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 112624 113514 . + . ID=gene-AD12_RS02685;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AD12_RS02685;old_locus_tag=AD12_4336 NZ_JJLK01000084.1 Protein Homology CDS 112624 113514 . + 0 ID=cds-WP_001056273.1;Parent=gene-AD12_RS02685;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AD12_RS02685;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 113640 114569 . + . ID=gene-AD12_RS02680;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AD12_RS02680;old_locus_tag=AD12_4337 NZ_JJLK01000084.1 Protein Homology CDS 113640 114569 . + 0 ID=cds-WP_032220858.1;Parent=gene-AD12_RS02680;Dbxref=GenBank:WP_032220858.1;Name=WP_032220858.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AD12_RS02680;product=ribokinase;protein_id=WP_032220858.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 114573 115565 . + . ID=gene-AD12_RS02675;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AD12_RS02675;old_locus_tag=AD12_4338 NZ_JJLK01000084.1 Protein Homology CDS 114573 115565 . + 0 ID=cds-WP_000224476.1;Parent=gene-AD12_RS02675;Dbxref=GenBank:WP_000224476.1;Name=WP_000224476.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AD12_RS02675;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224476.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 115531 116958 . - . ID=gene-AD12_RS02670;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD12_RS02670;old_locus_tag=AD12_4339 NZ_JJLK01000084.1 Protein Homology CDS 115531 116958 . - 0 ID=cds-WP_001280887.1;Parent=gene-AD12_RS02670;Dbxref=GenBank:WP_001280887.1;Name=WP_001280887.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AD12_RS02670;product=multidrug transporter subunit MdtD;protein_id=WP_001280887.1;transl_table=11 NZ_JJLK01000084.1 RefSeq gene 116981 117673 . - . ID=gene-AD12_RS02665;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AD12_RS02665;old_locus_tag=AD12_4340 NZ_JJLK01000084.1 Protein Homology CDS 116981 117673 . - 0 ID=cds-WP_001131169.1;Parent=gene-AD12_RS02665;Dbxref=GenBank:WP_001131169.1;Name=WP_001131169.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AD12_RS02665;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131169.1;transl_table=11 ##sequence-region NZ_JJLK01000085.1 1 87097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000085.1 RefSeq region 1 87097 . + . ID=NZ_JJLK01000085.1:1..87097;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000085.1 RefSeq gene 109 224 . + . ID=gene-AD12_RS02660;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS02660;old_locus_tag=AD12_4341 NZ_JJLK01000085.1 cmsearch rRNA 109 224 . + . ID=rna-AD12_RS02660;Parent=gene-AD12_RS02660;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02660;product=5S ribosomal RNA NZ_JJLK01000085.1 cmsearch exon 109 224 . + . ID=exon-AD12_RS02660-1;Parent=rna-AD12_RS02660;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02660;product=5S ribosomal RNA NZ_JJLK01000085.1 RefSeq gene 279 355 . + . ID=gene-AD12_RS02655;Name=AD12_RS02655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02655;old_locus_tag=AD12_4342 NZ_JJLK01000085.1 tRNAscan-SE tRNA 279 355 . + . ID=rna-AD12_RS02655;Parent=gene-AD12_RS02655;anticodon=(pos:313..315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02655;product=tRNA-Asp NZ_JJLK01000085.1 tRNAscan-SE exon 279 355 . + . ID=exon-AD12_RS02655-1;Parent=rna-AD12_RS02655;anticodon=(pos:313..315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02655;product=tRNA-Asp NZ_JJLK01000085.1 RefSeq gene 364 439 . + . ID=gene-AD12_RS02650;Name=AD12_RS02650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02650;old_locus_tag=AD12_4343 NZ_JJLK01000085.1 tRNAscan-SE tRNA 364 439 . + . ID=rna-AD12_RS02650;Parent=gene-AD12_RS02650;anticodon=(pos:397..399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02650;product=tRNA-Trp NZ_JJLK01000085.1 tRNAscan-SE exon 364 439 . + . ID=exon-AD12_RS02650-1;Parent=rna-AD12_RS02650;anticodon=(pos:397..399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02650;product=tRNA-Trp NZ_JJLK01000085.1 RefSeq gene 535 1374 . - . ID=gene-AD12_RS02645;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AD12_RS02645;old_locus_tag=AD12_4344 NZ_JJLK01000085.1 Protein Homology CDS 535 1374 . - 0 ID=cds-WP_001406292.1;Parent=gene-AD12_RS02645;Dbxref=GenBank:WP_001406292.1;Name=WP_001406292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312725.1;locus_tag=AD12_RS02645;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001406292.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 1493 1831 . + . ID=gene-AD12_RS02640;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AD12_RS02640;old_locus_tag=AD12_4345 NZ_JJLK01000085.1 Protein Homology CDS 1493 1831 . + 0 ID=cds-WP_000841001.1;Parent=gene-AD12_RS02640;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AD12_RS02640;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 1856 3376 . - . ID=gene-AD12_RS02635;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AD12_RS02635;old_locus_tag=AD12_4346 NZ_JJLK01000085.1 Protein Homology CDS 1856 3376 . - 0 ID=cds-WP_000058976.1;Parent=gene-AD12_RS02635;Dbxref=GenBank:WP_000058976.1;Name=WP_000058976.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AD12_RS02635;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058976.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 3729 3827 . + . ID=gene-AD12_RS0125325;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AD12_RS0125325 NZ_JJLK01000085.1 Protein Homology CDS 3729 3827 . + 0 ID=cds-WP_001311244.1;Parent=gene-AD12_RS0125325;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AD12_RS0125325;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 3914 3964 . + . ID=gene-AD12_RS28930;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AD12_RS28930 NZ_JJLK01000085.1 Protein Homology CDS 3914 3964 . + 0 ID=cds-WP_001387183.1;Parent=gene-AD12_RS28930;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AD12_RS28930;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 3967 5613 . + . ID=gene-AD12_RS02630;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AD12_RS02630;old_locus_tag=AD12_4347 NZ_JJLK01000085.1 Protein Homology CDS 3967 5613 . + 0 ID=cds-WP_001012619.1;Parent=gene-AD12_RS02630;Dbxref=GenBank:WP_001012619.1;Name=WP_001012619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AD12_RS02630;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012619.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 5610 5873 . + . ID=gene-AD12_RS02625;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AD12_RS02625;old_locus_tag=AD12_4348 NZ_JJLK01000085.1 Protein Homology CDS 5610 5873 . + 0 ID=cds-WP_000983255.1;Parent=gene-AD12_RS02625;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AD12_RS02625;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 5893 6822 . + . ID=gene-AD12_RS02620;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AD12_RS02620;old_locus_tag=AD12_4349 NZ_JJLK01000085.1 Protein Homology CDS 5893 6822 . + 0 ID=cds-WP_032286775.1;Parent=gene-AD12_RS02620;Dbxref=GenBank:WP_032286775.1;Name=WP_032286775.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AD12_RS02620;product=branched-chain-amino-acid transaminase;protein_id=WP_032286775.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 6887 8737 . + . ID=gene-AD12_RS02615;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AD12_RS02615;old_locus_tag=AD12_4350 NZ_JJLK01000085.1 Protein Homology CDS 6887 8737 . + 0 ID=cds-WP_001127394.1;Parent=gene-AD12_RS02615;Dbxref=GenBank:WP_001127394.1;Name=WP_001127394.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AD12_RS02615;product=dihydroxy-acid dehydratase;protein_id=WP_001127394.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 8740 10284 . + . ID=gene-AD12_RS02610;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AD12_RS02610;old_locus_tag=AD12_4351 NZ_JJLK01000085.1 Protein Homology CDS 8740 10284 . + 0 ID=cds-WP_000785599.1;Parent=gene-AD12_RS02610;Dbxref=GenBank:WP_000785599.1;Name=WP_000785599.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=AD12_RS02610;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785599.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 10281 11171 . - . ID=gene-AD12_RS02605;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AD12_RS02605;old_locus_tag=AD12_4352 NZ_JJLK01000085.1 Protein Homology CDS 10281 11171 . - 0 ID=cds-WP_000365790.1;Parent=gene-AD12_RS02605;Dbxref=GenBank:WP_000365790.1;Name=WP_000365790.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053418.1;locus_tag=AD12_RS02605;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365790.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 11321 12796 . + . ID=gene-AD12_RS02600;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AD12_RS02600;old_locus_tag=AD12_4353 NZ_JJLK01000085.1 Protein Homology CDS 11321 12796 . + 0 ID=cds-WP_001356300.1;Parent=gene-AD12_RS02600;Dbxref=GenBank:WP_001356300.1;Name=WP_001356300.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AD12_RS02600;product=ketol-acid reductoisomerase;protein_id=WP_001356300.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 12883 13164 . - . ID=gene-AD12_RS02595;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AD12_RS02595;old_locus_tag=AD12_4354 NZ_JJLK01000085.1 Protein Homology CDS 12883 13164 . - 0 ID=cds-WP_001140251.1;Parent=gene-AD12_RS02595;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AD12_RS02595;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 13363 13812 . - . ID=gene-AD12_RS02590;Name=AD12_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS02590;old_locus_tag=AD12_4355 NZ_JJLK01000085.1 Protein Homology CDS 13363 13812 . - 0 ID=cds-WP_000996690.1;Parent=gene-AD12_RS02590;Dbxref=GenBank:WP_000996690.1;Name=WP_000996690.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AD12_RS02590;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_000996690.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 14029 16050 . + . ID=gene-AD12_RS02585;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AD12_RS02585;old_locus_tag=AD12_4356 NZ_JJLK01000085.1 Protein Homology CDS 14029 16050 . + 0 ID=cds-WP_001238869.1;Parent=gene-AD12_RS02585;Dbxref=GenBank:WP_001238869.1;Name=WP_001238869.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312738.1;locus_tag=AD12_RS02585;product=DNA helicase Rep;protein_id=WP_001238869.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 16097 17581 . - . ID=gene-AD12_RS02580;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AD12_RS02580;old_locus_tag=AD12_4357 NZ_JJLK01000085.1 Protein Homology CDS 16097 17581 . - 0 ID=cds-WP_001356299.1;Parent=gene-AD12_RS02580;Dbxref=GenBank:WP_001356299.1;Name=WP_001356299.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AD12_RS02580;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001356299.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 17715 18980 . - . ID=gene-AD12_RS02575;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AD12_RS02575;old_locus_tag=AD12_4358 NZ_JJLK01000085.1 Protein Homology CDS 17715 18980 . - 0 ID=cds-WP_000047499.1;Parent=gene-AD12_RS02575;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AD12_RS02575;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 19111 19440 . + . ID=gene-AD12_RS02570;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AD12_RS02570;old_locus_tag=AD12_4359 NZ_JJLK01000085.1 Protein Homology CDS 19111 19440 . + 0 ID=cds-WP_001280776.1;Parent=gene-AD12_RS02570;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AD12_RS02570;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 19581 19682 . + . ID=gene-AD12_RS0125330;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AD12_RS0125330 NZ_JJLK01000085.1 Protein Homology CDS 19581 19682 . + 0 ID=cds-WP_001295255.1;Parent=gene-AD12_RS0125330;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AD12_RS0125330;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 19767 21026 . + . ID=gene-AD12_RS02565;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AD12_RS02565;old_locus_tag=AD12_4360 NZ_JJLK01000085.1 Protein Homology CDS 19767 21026 . + 0 ID=cds-WP_001054527.1;Parent=gene-AD12_RS02565;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AD12_RS02565;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 21266 22369 . + . ID=gene-AD12_RS02555;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AD12_RS02555;old_locus_tag=AD12_4362 NZ_JJLK01000085.1 Protein Homology CDS 21266 22369 . + 0 ID=cds-WP_001050960.1;Parent=gene-AD12_RS02555;Dbxref=GenBank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AD12_RS02555;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 22381 23427 . + . ID=gene-AD12_RS02550;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AD12_RS02550;old_locus_tag=AD12_4363 NZ_JJLK01000085.1 Protein Homology CDS 22381 23427 . + 0 ID=cds-WP_001456763.1;Parent=gene-AD12_RS02550;Dbxref=GenBank:WP_001456763.1;Name=WP_001456763.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AD12_RS02550;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001456763.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 23483 24613 . + . ID=gene-AD12_RS02545;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AD12_RS02545;old_locus_tag=AD12_4364 NZ_JJLK01000085.1 Protein Homology CDS 23483 24613 . + 0 ID=cds-WP_000866670.1;Parent=gene-AD12_RS02545;Dbxref=GenBank:WP_000866670.1;Name=WP_000866670.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AD12_RS02545;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866670.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 24610 25872 . + . ID=gene-AD12_RS02540;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AD12_RS02540;old_locus_tag=AD12_4365 NZ_JJLK01000085.1 Protein Homology CDS 24610 25872 . + 0 ID=cds-WP_000006621.1;Parent=gene-AD12_RS02540;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AD12_RS02540;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 25872 26939 . + . ID=gene-AD12_RS02535;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AD12_RS02535;old_locus_tag=AD12_4366 NZ_JJLK01000085.1 Protein Homology CDS 25872 26939 . + 0 ID=cds-WP_001226604.1;Parent=gene-AD12_RS02535;Dbxref=GenBank:WP_001226604.1;Name=WP_001226604.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709592.1;locus_tag=AD12_RS02535;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226604.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 26958 27839 . + . ID=gene-AD12_RS02530;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD12_RS02530;old_locus_tag=AD12_4367 NZ_JJLK01000085.1 Protein Homology CDS 26958 27839 . + 0 ID=cds-WP_000676056.1;Parent=gene-AD12_RS02530;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AD12_RS02530;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 27817 28491 . + . ID=gene-AD12_RS02525;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AD12_RS02525;old_locus_tag=AD12_4368 NZ_JJLK01000085.1 Protein Homology CDS 27817 28491 . + 0 ID=cds-WP_001145196.1;Parent=gene-AD12_RS02525;Dbxref=GenBank:WP_001145196.1;Name=WP_001145196.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AD12_RS02525;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145196.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 28496 29626 . + . ID=gene-AD12_RS02520;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AD12_RS02520;old_locus_tag=AD12_4369 NZ_JJLK01000085.1 Protein Homology CDS 28496 29626 . + 0 ID=cds-WP_000612036.1;Parent=gene-AD12_RS02520;Dbxref=GenBank:WP_000612036.1;Name=WP_000612036.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AD12_RS02520;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612036.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 29628 30878 . + . ID=gene-AD12_RS02515;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AD12_RS02515;old_locus_tag=AD12_4370 NZ_JJLK01000085.1 Protein Homology CDS 29628 30878 . + 0 ID=cds-WP_000050265.1;Parent=gene-AD12_RS02515;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AD12_RS02515;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 30875 31954 . + . ID=gene-AD12_RS02510;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AD12_RS02510;old_locus_tag=AD12_4371 NZ_JJLK01000085.1 Protein Homology CDS 30875 31954 . + 0 ID=cds-WP_000217240.1;Parent=gene-AD12_RS02510;Dbxref=GenBank:WP_000217240.1;Name=WP_000217240.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AD12_RS02510;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217240.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 31951 33303 . + . ID=gene-AD12_RS02505;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AD12_RS02505;old_locus_tag=AD12_4372 NZ_JJLK01000085.1 Protein Homology CDS 31951 33303 . + 0 ID=cds-WP_000055132.1;Parent=gene-AD12_RS02505;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AD12_RS02505;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 33306 34046 . + . ID=gene-AD12_RS02500;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AD12_RS02500;old_locus_tag=AD12_4373 NZ_JJLK01000085.1 Protein Homology CDS 33306 34046 . + 0 ID=cds-WP_001064038.1;Parent=gene-AD12_RS02500;Dbxref=GenBank:WP_001064038.1;Name=WP_001064038.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AD12_RS02500;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064038.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 34237 35622 . + . ID=gene-AD12_RS02495;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AD12_RS02495;old_locus_tag=AD12_4374 NZ_JJLK01000085.1 Protein Homology CDS 34237 35622 . + 0 ID=cds-WP_000774731.1;Parent=gene-AD12_RS02495;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AD12_RS02495;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 35725 35801 . + . ID=gene-AD12_RS02490;Name=AD12_RS02490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02490;old_locus_tag=AD12_4375 NZ_JJLK01000085.1 tRNAscan-SE tRNA 35725 35801 . + . ID=rna-AD12_RS02490;Parent=gene-AD12_RS02490;anticodon=(pos:35759..35761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02490;product=tRNA-Arg NZ_JJLK01000085.1 tRNAscan-SE exon 35725 35801 . + . ID=exon-AD12_RS02490-1;Parent=rna-AD12_RS02490;anticodon=(pos:35759..35761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02490;product=tRNA-Arg NZ_JJLK01000085.1 RefSeq gene 35860 35935 . + . ID=gene-AD12_RS02485;Name=AD12_RS02485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02485;old_locus_tag=AD12_4376 NZ_JJLK01000085.1 tRNAscan-SE tRNA 35860 35935 . + . ID=rna-AD12_RS02485;Parent=gene-AD12_RS02485;anticodon=(pos:35893..35895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02485;product=tRNA-His NZ_JJLK01000085.1 tRNAscan-SE exon 35860 35935 . + . ID=exon-AD12_RS02485-1;Parent=rna-AD12_RS02485;anticodon=(pos:35893..35895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02485;product=tRNA-His NZ_JJLK01000085.1 RefSeq gene 35956 36042 . + . ID=gene-AD12_RS02480;Name=AD12_RS02480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02480;old_locus_tag=AD12_4377 NZ_JJLK01000085.1 tRNAscan-SE tRNA 35956 36042 . + . ID=rna-AD12_RS02480;Parent=gene-AD12_RS02480;anticodon=(pos:35990..35992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02480;product=tRNA-Leu NZ_JJLK01000085.1 tRNAscan-SE exon 35956 36042 . + . ID=exon-AD12_RS02480-1;Parent=rna-AD12_RS02480;anticodon=(pos:35990..35992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02480;product=tRNA-Leu NZ_JJLK01000085.1 RefSeq gene 36085 36161 . + . ID=gene-AD12_RS02475;Name=AD12_RS02475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02475;old_locus_tag=AD12_4378 NZ_JJLK01000085.1 tRNAscan-SE tRNA 36085 36161 . + . ID=rna-AD12_RS02475;Parent=gene-AD12_RS02475;anticodon=(pos:36119..36121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02475;product=tRNA-Pro NZ_JJLK01000085.1 tRNAscan-SE exon 36085 36161 . + . ID=exon-AD12_RS02475-1;Parent=rna-AD12_RS02475;anticodon=(pos:36119..36121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02475;product=tRNA-Pro NZ_JJLK01000085.1 RefSeq gene 36308 37543 . + . ID=gene-AD12_RS02470;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AD12_RS02470;old_locus_tag=AD12_4379 NZ_JJLK01000085.1 Protein Homology CDS 36308 37543 . + 0 ID=cds-WP_000941526.1;Parent=gene-AD12_RS02470;Dbxref=GenBank:WP_000941526.1;Name=WP_000941526.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312757.1;locus_tag=AD12_RS02470;product=anaerobic sulfatase maturase;protein_id=WP_000941526.1;transl_table=11 NZ_JJLK01000085.1 RefSeq pseudogene 37651 37788 . - . ID=gene-AD12_RS29145;Name=AD12_RS29145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29145;partial=true;pseudo=true;start_range=.,37651 NZ_JJLK01000085.1 Protein Homology CDS 37651 37788 . - 0 ID=cds-AD12_RS29145;Parent=gene-AD12_RS29145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312758.1;locus_tag=AD12_RS29145;partial=true;product=arylsulfatase;pseudo=true;start_range=.,37651;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 38467 39663 . - . ID=gene-AD12_RS02465;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AD12_RS02465;old_locus_tag=AD12_4381 NZ_JJLK01000085.1 Protein Homology CDS 38467 39663 . - 0 ID=cds-WP_000921791.1;Parent=gene-AD12_RS02465;Dbxref=GenBank:WP_000921791.1;Name=WP_000921791.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AD12_RS02465;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 39666 40889 . - . ID=gene-AD12_RS02460;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AD12_RS02460;old_locus_tag=AD12_4382 NZ_JJLK01000085.1 Protein Homology CDS 39666 40889 . - 0 ID=cds-WP_032286777.1;Parent=gene-AD12_RS02460;Dbxref=GenBank:WP_032286777.1;Name=WP_032286777.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312760.1;locus_tag=AD12_RS02460;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_032286777.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 40911 41651 . - . ID=gene-AD12_RS02455;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AD12_RS02455;old_locus_tag=AD12_4383 NZ_JJLK01000085.1 Protein Homology CDS 40911 41651 . - 0 ID=cds-WP_000026069.1;Parent=gene-AD12_RS02455;Dbxref=GenBank:WP_000026069.1;Name=WP_000026069.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AD12_RS02455;product=uroporphyrinogen-III synthase;protein_id=WP_000026069.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 41648 42589 . - . ID=gene-AD12_RS02450;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AD12_RS02450;old_locus_tag=AD12_4384 NZ_JJLK01000085.1 Protein Homology CDS 41648 42589 . - 0 ID=cds-WP_001314260.1;Parent=gene-AD12_RS02450;Dbxref=GenBank:WP_001314260.1;Name=WP_001314260.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AD12_RS02450;product=hydroxymethylbilane synthase;protein_id=WP_001314260.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 42976 45522 . + . ID=gene-AD12_RS02445;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AD12_RS02445;old_locus_tag=AD12_4385 NZ_JJLK01000085.1 Protein Homology CDS 42976 45522 . + 0 ID=cds-WP_000281680.1;Parent=gene-AD12_RS02445;Dbxref=GenBank:WP_000281680.1;Name=WP_000281680.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312763.1;locus_tag=AD12_RS02445;product=class I adenylate cyclase;protein_id=WP_000281680.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 45562 45882 . - . ID=gene-AD12_RS02440;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AD12_RS02440;old_locus_tag=AD12_4386 NZ_JJLK01000085.1 Protein Homology CDS 45562 45882 . - 0 ID=cds-WP_000999947.1;Parent=gene-AD12_RS02440;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AD12_RS02440;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JJLK01000085.1 RefSeq pseudogene 46008 46186 . - . ID=gene-AD12_RS29150;Name=AD12_RS29150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29150;partial=true;pseudo=true;start_range=.,46008 NZ_JJLK01000085.1 Protein Homology CDS 46008 46186 . - 0 ID=cds-AD12_RS29150;Parent=gene-AD12_RS29150;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AD12_RS29150;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,46008;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 46345 46548 . + . ID=gene-AD12_RS02435;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AD12_RS02435;old_locus_tag=AD12_4388 NZ_JJLK01000085.1 Protein Homology CDS 46345 46548 . + 0 ID=cds-WP_000799889.1;Parent=gene-AD12_RS02435;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AD12_RS02435;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 46585 47409 . + . ID=gene-AD12_RS02430;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AD12_RS02430;old_locus_tag=AD12_4389 NZ_JJLK01000085.1 Protein Homology CDS 46585 47409 . + 0 ID=cds-WP_001160654.1;Parent=gene-AD12_RS02430;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AD12_RS02430;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 47406 48113 . + . ID=gene-AD12_RS02425;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AD12_RS02425;old_locus_tag=AD12_4390 NZ_JJLK01000085.1 Protein Homology CDS 47406 48113 . + 0 ID=cds-WP_000812806.1;Parent=gene-AD12_RS02425;Dbxref=GenBank:WP_000812806.1;Name=WP_000812806.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AD12_RS02425;product=DUF484 domain-containing protein;protein_id=WP_000812806.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 48110 49006 . + . ID=gene-AD12_RS02420;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AD12_RS02420;old_locus_tag=AD12_4391 NZ_JJLK01000085.1 Protein Homology CDS 48110 49006 . + 0 ID=cds-WP_000130686.1;Parent=gene-AD12_RS02420;Dbxref=GenBank:WP_000130686.1;Name=WP_000130686.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709618.1;locus_tag=AD12_RS02420;product=tyrosine recombinase XerC;protein_id=WP_000130686.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 49006 49722 . + . ID=gene-AD12_RS02415;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AD12_RS02415;old_locus_tag=AD12_4392 NZ_JJLK01000085.1 Protein Homology CDS 49006 49722 . + 0 ID=cds-WP_001213584.1;Parent=gene-AD12_RS02415;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AD12_RS02415;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 49806 51968 . + . ID=gene-AD12_RS02410;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AD12_RS02410;old_locus_tag=AD12_4393 NZ_JJLK01000085.1 Protein Homology CDS 49806 51968 . + 0 ID=cds-WP_000383407.1;Parent=gene-AD12_RS02410;Dbxref=GenBank:WP_000383407.1;Name=WP_000383407.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312770.1;locus_tag=AD12_RS02410;product=DNA helicase II;protein_id=WP_000383407.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 52115 52879 . - . ID=gene-AD12_RS02405;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AD12_RS02405;old_locus_tag=AD12_4394 NZ_JJLK01000085.1 Protein Homology CDS 52115 52879 . - 0 ID=cds-WP_032286778.1;Parent=gene-AD12_RS02405;Dbxref=GenBank:WP_032286778.1;Name=WP_032286778.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312772.1;locus_tag=AD12_RS02405;product=phosphodiester glycosidase family protein;protein_id=WP_032286778.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 53041 53097 . + . ID=gene-AD12_RS29330;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AD12_RS29330 NZ_JJLK01000085.1 Protein Homology CDS 53041 53097 . + 0 ID=cds-WP_211180520.1;Parent=gene-AD12_RS29330;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AD12_RS29330;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 53249 54199 . + . ID=gene-AD12_RS02395;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AD12_RS02395;old_locus_tag=AD12_4396 NZ_JJLK01000085.1 Protein Homology CDS 53249 54199 . + 0 ID=cds-WP_000947159.1;Parent=gene-AD12_RS02395;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AD12_RS02395;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 54242 54622 . - . ID=gene-AD12_RS02390;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AD12_RS02390;old_locus_tag=AD12_4397 NZ_JJLK01000085.1 Protein Homology CDS 54242 54622 . - 0 ID=cds-WP_000032581.1;Parent=gene-AD12_RS02390;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AD12_RS02390;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 54636 55016 . - . ID=gene-AD12_RS0125340;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AD12_RS0125340 NZ_JJLK01000085.1 Protein Homology CDS 54636 55016 . - 0 ID=cds-WP_001399535.1;Parent=gene-AD12_RS0125340;Dbxref=GenBank:WP_001399535.1;Name=WP_001399535.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AD12_RS0125340;product=protein YigG;protein_id=WP_001399535.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 55111 56001 . - . ID=gene-AD12_RS02385;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AD12_RS02385;old_locus_tag=AD12_4399 NZ_JJLK01000085.1 Protein Homology CDS 55111 56001 . - 0 ID=cds-WP_000339104.1;Parent=gene-AD12_RS02385;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AD12_RS02385;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 56053 56520 . - . ID=gene-AD12_RS02380;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AD12_RS02380;old_locus_tag=AD12_4400 NZ_JJLK01000085.1 Protein Homology CDS 56053 56520 . - 0 ID=cds-WP_001277142.1;Parent=gene-AD12_RS02380;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AD12_RS02380;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 56685 57554 . + . ID=gene-AD12_RS02375;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AD12_RS02375;old_locus_tag=AD12_4401 NZ_JJLK01000085.1 Protein Homology CDS 56685 57554 . + 0 ID=cds-WP_001259700.1;Parent=gene-AD12_RS02375;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AD12_RS02375;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 57687 59516 . + . ID=gene-AD12_RS02370;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AD12_RS02370;old_locus_tag=AD12_4402 NZ_JJLK01000085.1 Protein Homology CDS 57687 59516 . + 0 ID=cds-WP_000035581.1;Parent=gene-AD12_RS02370;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AD12_RS02370;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 59580 60200 . + . ID=gene-AD12_RS02365;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AD12_RS02365;old_locus_tag=AD12_4403 NZ_JJLK01000085.1 Protein Homology CDS 59580 60200 . + 0 ID=cds-WP_000928821.1;Parent=gene-AD12_RS02365;Dbxref=GenBank:WP_000928821.1;Name=WP_000928821.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AD12_RS02365;product=threonine export protein RhtC;protein_id=WP_000928821.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 60262 60882 . - . ID=gene-AD12_RS02360;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AD12_RS02360;old_locus_tag=AD12_4404 NZ_JJLK01000085.1 Protein Homology CDS 60262 60882 . - 0 ID=cds-WP_000171710.1;Parent=gene-AD12_RS02360;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AD12_RS02360;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 60993 62015 . + . ID=gene-AD12_RS02355;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AD12_RS02355;old_locus_tag=AD12_4405 NZ_JJLK01000085.1 Protein Homology CDS 60993 62015 . + 0 ID=cds-WP_000487654.1;Parent=gene-AD12_RS02355;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AD12_RS02355;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 62023 62823 . + . ID=gene-AD12_RS02350;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AD12_RS02350;old_locus_tag=AD12_4406 NZ_JJLK01000085.1 Protein Homology CDS 62023 62823 . + 0 ID=cds-WP_000285329.1;Parent=gene-AD12_RS02350;Dbxref=GenBank:WP_000285329.1;Name=WP_000285329.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=AD12_RS02350;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285329.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 62899 63798 . + . ID=gene-AD12_RS02345;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AD12_RS02345;old_locus_tag=AD12_4407 NZ_JJLK01000085.1 Protein Homology CDS 62899 63798 . + 0 ID=cds-WP_001196238.1;Parent=gene-AD12_RS02345;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AD12_RS02345;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 63686 64639 . - . ID=gene-AD12_RS0125345;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AD12_RS0125345 NZ_JJLK01000085.1 Protein Homology CDS 63686 64639 . - 0 ID=cds-WP_000573618.1;Parent=gene-AD12_RS0125345;Dbxref=GenBank:WP_000573618.1;Name=WP_000573618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AD12_RS0125345;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573618.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 64757 67018 . + . ID=gene-AD12_RS02340;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AD12_RS02340;old_locus_tag=AD12_4409 NZ_JJLK01000085.1 Protein Homology CDS 64757 67018 . + 0 ID=cds-WP_000153979.1;Parent=gene-AD12_RS02340;Dbxref=GenBank:WP_000153979.1;Name=WP_000153979.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709635.1;locus_tag=AD12_RS02340;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153979.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 67057 67872 . - . ID=gene-AD12_RS02335;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AD12_RS02335;old_locus_tag=AD12_4410 NZ_JJLK01000085.1 Protein Homology CDS 67057 67872 . - 0 ID=cds-WP_001296987.1;Parent=gene-AD12_RS02335;Dbxref=GenBank:WP_001296987.1;Name=WP_001296987.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026268.1;locus_tag=AD12_RS02335;product=dienelactone hydrolase family protein;protein_id=WP_001296987.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 68134 68895 . + . ID=gene-AD12_RS02330;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AD12_RS02330;old_locus_tag=AD12_4411 NZ_JJLK01000085.1 Protein Homology CDS 68134 68895 . + 0 ID=cds-WP_000045180.1;Parent=gene-AD12_RS02330;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AD12_RS02330;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 69036 70463 . + . ID=gene-AD12_RS02325;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AD12_RS02325;old_locus_tag=AD12_4412 NZ_JJLK01000085.1 Protein Homology CDS 69036 70463 . + 0 ID=cds-WP_032286779.1;Parent=gene-AD12_RS02325;Dbxref=GenBank:WP_032286779.1;Name=WP_032286779.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AD12_RS02325;product=DNA recombination protein RmuC;protein_id=WP_032286779.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 70558 71313 . + . ID=gene-AD12_RS02320;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AD12_RS02320;old_locus_tag=AD12_4413 NZ_JJLK01000085.1 Protein Homology CDS 70558 71313 . + 0 ID=cds-WP_000227958.1;Parent=gene-AD12_RS02320;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AD12_RS02320;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 71327 71932 . + . ID=gene-AD12_RS02315;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AD12_RS02315;old_locus_tag=AD12_4414 NZ_JJLK01000085.1 Protein Homology CDS 71327 71932 . + 0 ID=cds-WP_001295259.1;Parent=gene-AD12_RS02315;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AD12_RS02315;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 71929 73569 . + . ID=gene-AD12_RS02310;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AD12_RS02310;old_locus_tag=AD12_4415 NZ_JJLK01000085.1 Protein Homology CDS 71929 73569 . + 0 ID=cds-WP_000187530.1;Parent=gene-AD12_RS02310;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AD12_RS02310;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 73648 73917 . + . ID=gene-AD12_RS02305;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AD12_RS02305;old_locus_tag=AD12_4416 NZ_JJLK01000085.1 Protein Homology CDS 73648 73917 . + 0 ID=cds-WP_001295260.1;Parent=gene-AD12_RS02305;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AD12_RS02305;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 73921 74436 . + . ID=gene-AD12_RS02300;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AD12_RS02300;old_locus_tag=AD12_4417 NZ_JJLK01000085.1 Protein Homology CDS 73921 74436 . + 0 ID=cds-WP_000459594.1;Parent=gene-AD12_RS02300;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AD12_RS02300;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 74439 75215 . + . ID=gene-AD12_RS02295;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AD12_RS02295;old_locus_tag=AD12_4418 NZ_JJLK01000085.1 Protein Homology CDS 74439 75215 . + 0 ID=cds-WP_000109943.1;Parent=gene-AD12_RS02295;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AD12_RS02295;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 75257 76039 . + . ID=gene-AD12_RS02290;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AD12_RS02290;old_locus_tag=AD12_4419 NZ_JJLK01000085.1 Protein Homology CDS 75257 76039 . + 0 ID=cds-WP_001301305.1;Parent=gene-AD12_RS02290;Dbxref=GenBank:WP_001301305.1;Name=WP_001301305.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=AD12_RS02290;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001301305.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 76036 76524 . - . ID=gene-AD12_RS02285;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AD12_RS02285;old_locus_tag=AD12_4420 NZ_JJLK01000085.1 Protein Homology CDS 76036 76524 . - 0 ID=cds-WP_001192396.1;Parent=gene-AD12_RS02285;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AD12_RS02285;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 76691 78184 . + . ID=gene-AD12_RS02280;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AD12_RS02280;old_locus_tag=AD12_4421 NZ_JJLK01000085.1 Protein Homology CDS 76691 78184 . + 0 ID=cds-WP_000339804.1;Parent=gene-AD12_RS02280;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AD12_RS02280;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 78230 78931 . + . ID=gene-AD12_RS02275;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AD12_RS02275;old_locus_tag=AD12_4422 NZ_JJLK01000085.1 Protein Homology CDS 78230 78931 . + 0 ID=cds-WP_000209826.1;Parent=gene-AD12_RS02275;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AD12_RS02275;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 79115 80278 . - . ID=gene-AD12_RS02270;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AD12_RS02270;old_locus_tag=AD12_4423 NZ_JJLK01000085.1 Protein Homology CDS 79115 80278 . - 0 ID=cds-WP_000438729.1;Parent=gene-AD12_RS02270;Dbxref=GenBank:WP_000438729.1;Name=WP_000438729.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709649.1;locus_tag=AD12_RS02270;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438729.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 80288 82477 . - . ID=gene-AD12_RS02265;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AD12_RS02265;old_locus_tag=AD12_4424 NZ_JJLK01000085.1 Protein Homology CDS 80288 82477 . - 0 ID=cds-WP_000965979.1;Parent=gene-AD12_RS02265;Dbxref=GenBank:WP_000965979.1;Name=WP_000965979.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AD12_RS02265;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965979.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 82667 83998 . + . ID=gene-AD12_RS02260;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AD12_RS02260;old_locus_tag=AD12_4425 NZ_JJLK01000085.1 Protein Homology CDS 82667 83998 . + 0 ID=cds-WP_000444561.1;Parent=gene-AD12_RS02260;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AD12_RS02260;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 83998 84612 . + . ID=gene-AD12_RS0125350;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AD12_RS0125350 NZ_JJLK01000085.1 Protein Homology CDS 83998 84612 . + 0 ID=cds-WP_001295262.1;Parent=gene-AD12_RS0125350;Dbxref=GenBank:WP_001295262.1;Name=WP_001295262.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312803.2;locus_tag=AD12_RS0125350;product=IMPACT family protein;protein_id=WP_001295262.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 84651 86102 . + . ID=gene-AD12_RS02255;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AD12_RS02255;old_locus_tag=AD12_4428 NZ_JJLK01000085.1 Protein Homology CDS 84651 86102 . + 0 ID=cds-WP_000545677.1;Parent=gene-AD12_RS02255;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AD12_RS02255;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JJLK01000085.1 RefSeq gene 86114 86659 . + . ID=gene-AD12_RS02250;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AD12_RS02250;old_locus_tag=AD12_4429 NZ_JJLK01000085.1 Protein Homology CDS 86114 86659 . + 0 ID=cds-WP_032286781.1;Parent=gene-AD12_RS02250;Dbxref=GenBank:WP_032286781.1;Name=WP_032286781.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AD12_RS02250;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_032286781.1;transl_table=11 ##sequence-region NZ_JJLK01000086.1 1 5979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000086.1 RefSeq region 1 5979 . + . ID=NZ_JJLK01000086.1:1..5979;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000086.1 RefSeq gene 1 1151 . + . ID=gene-AD12_RS0125360;Name=AD12_RS0125360;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0125360;partial=true;start_range=.,1 NZ_JJLK01000086.1 cmsearch rRNA 1 1151 . + . ID=rna-AD12_RS0125360;Parent=gene-AD12_RS0125360;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125360;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000086.1 cmsearch exon 1 1151 . + . ID=exon-AD12_RS0125360-1;Parent=rna-AD12_RS0125360;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125360;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000086.1 RefSeq gene 1247 1362 . + . ID=gene-AD12_RS02245;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS02245;old_locus_tag=AD12_4431 NZ_JJLK01000086.1 cmsearch rRNA 1247 1362 . + . ID=rna-AD12_RS02245;Parent=gene-AD12_RS02245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02245;product=5S ribosomal RNA NZ_JJLK01000086.1 cmsearch exon 1247 1362 . + . ID=exon-AD12_RS02245-1;Parent=rna-AD12_RS02245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02245;product=5S ribosomal RNA NZ_JJLK01000086.1 RefSeq gene 1497 2525 . + . ID=gene-AD12_RS02240;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AD12_RS02240;old_locus_tag=AD12_4432 NZ_JJLK01000086.1 Protein Homology CDS 1497 2525 . + 0 ID=cds-WP_001016666.1;Parent=gene-AD12_RS02240;Dbxref=GenBank:WP_001016666.1;Name=WP_001016666.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=AD12_RS02240;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016666.1;transl_table=11 NZ_JJLK01000086.1 RefSeq gene 2522 3487 . + . ID=gene-AD12_RS02235;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AD12_RS02235;old_locus_tag=AD12_4433 NZ_JJLK01000086.1 Protein Homology CDS 2522 3487 . + 0 ID=cds-WP_000656438.1;Parent=gene-AD12_RS02235;Dbxref=GenBank:WP_000656438.1;Name=WP_000656438.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AD12_RS02235;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000656438.1;transl_table=11 NZ_JJLK01000086.1 RefSeq gene 3516 4466 . - . ID=gene-AD12_RS02230;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AD12_RS02230;old_locus_tag=AD12_4434 NZ_JJLK01000086.1 Protein Homology CDS 3516 4466 . - 0 ID=cds-WP_000023081.1;Parent=gene-AD12_RS02230;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AD12_RS02230;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJLK01000086.1 RefSeq gene 4828 4903 . + . ID=gene-AD12_RS02225;Name=AD12_RS02225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02225;old_locus_tag=AD12_4436 NZ_JJLK01000086.1 tRNAscan-SE tRNA 4828 4903 . + . ID=rna-AD12_RS02225;Parent=gene-AD12_RS02225;anticodon=(pos:4861..4863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02225;product=tRNA-Thr NZ_JJLK01000086.1 tRNAscan-SE exon 4828 4903 . + . ID=exon-AD12_RS02225-1;Parent=rna-AD12_RS02225;anticodon=(pos:4861..4863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02225;product=tRNA-Thr NZ_JJLK01000086.1 RefSeq gene 4912 4996 . + . ID=gene-AD12_RS02220;Name=AD12_RS02220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02220;old_locus_tag=AD12_4437 NZ_JJLK01000086.1 tRNAscan-SE tRNA 4912 4996 . + . ID=rna-AD12_RS02220;Parent=gene-AD12_RS02220;anticodon=(pos:4946..4948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02220;product=tRNA-Tyr NZ_JJLK01000086.1 tRNAscan-SE exon 4912 4996 . + . ID=exon-AD12_RS02220-1;Parent=rna-AD12_RS02220;anticodon=(pos:4946..4948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02220;product=tRNA-Tyr NZ_JJLK01000086.1 RefSeq gene 5113 5187 . + . ID=gene-AD12_RS02215;Name=AD12_RS02215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02215;old_locus_tag=AD12_4438 NZ_JJLK01000086.1 tRNAscan-SE tRNA 5113 5187 . + . ID=rna-AD12_RS02215;Parent=gene-AD12_RS02215;anticodon=(pos:5146..5148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02215;product=tRNA-Gly NZ_JJLK01000086.1 tRNAscan-SE exon 5113 5187 . + . ID=exon-AD12_RS02215-1;Parent=rna-AD12_RS02215;anticodon=(pos:5146..5148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02215;product=tRNA-Gly NZ_JJLK01000086.1 RefSeq gene 5194 5269 . + . ID=gene-AD12_RS02210;Name=AD12_RS02210;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS02210;old_locus_tag=AD12_4439 NZ_JJLK01000086.1 tRNAscan-SE tRNA 5194 5269 . + . ID=rna-AD12_RS02210;Parent=gene-AD12_RS02210;anticodon=(pos:5227..5229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02210;product=tRNA-Thr NZ_JJLK01000086.1 tRNAscan-SE exon 5194 5269 . + . ID=exon-AD12_RS02210-1;Parent=rna-AD12_RS02210;anticodon=(pos:5227..5229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS02210;product=tRNA-Thr NZ_JJLK01000086.1 RefSeq gene 5384 5979 . + . ID=gene-AD12_RS02205;Name=AD12_RS02205;end_range=5979,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS02205;old_locus_tag=AD12_4440;partial=true NZ_JJLK01000086.1 Protein Homology CDS 5384 5979 . + 0 ID=cds-WP_000031754.1;Parent=gene-AD12_RS02205;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;end_range=5979,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD12_RS02205;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;transl_table=11 ##sequence-region NZ_JJLK01000087.1 1 86643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000087.1 RefSeq region 1 86643 . + . ID=NZ_JJLK01000087.1:1..86643;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000087.1 RefSeq gene 60 175 . + . ID=gene-AD12_RS02200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS02200;old_locus_tag=AD12_4441 NZ_JJLK01000087.1 cmsearch rRNA 60 175 . + . ID=rna-AD12_RS02200;Parent=gene-AD12_RS02200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02200;product=5S ribosomal RNA NZ_JJLK01000087.1 cmsearch exon 60 175 . + . ID=exon-AD12_RS02200-1;Parent=rna-AD12_RS02200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS02200;product=5S ribosomal RNA NZ_JJLK01000087.1 RefSeq gene 279 806 . - . ID=gene-AD12_RS02195;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AD12_RS02195;old_locus_tag=AD12_4442 NZ_JJLK01000087.1 Protein Homology CDS 279 806 . - 0 ID=cds-WP_000907622.1-2;Parent=gene-AD12_RS02195;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AD12_RS02195;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 788 1372 . - . ID=gene-AD12_RS02190;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AD12_RS02190;old_locus_tag=AD12_4443 NZ_JJLK01000087.1 Protein Homology CDS 788 1372 . - 0 ID=cds-WP_001052181.1-2;Parent=gene-AD12_RS02190;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AD12_RS02190;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 1442 1711 . + . ID=gene-AD12_RS02185;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AD12_RS02185;old_locus_tag=AD12_4444 NZ_JJLK01000087.1 Protein Homology CDS 1442 1711 . + 0 ID=cds-WP_001295263.1-2;Parent=gene-AD12_RS02185;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AD12_RS02185;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 1788 2774 . + . ID=gene-AD12_RS02180;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AD12_RS02180;old_locus_tag=AD12_4445 NZ_JJLK01000087.1 Protein Homology CDS 1788 2774 . + 0 ID=cds-WP_001065500.1;Parent=gene-AD12_RS02180;Dbxref=GenBank:WP_001065500.1;Name=WP_001065500.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=AD12_RS02180;product=stress response kinase SrkA;protein_id=WP_001065500.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 2791 3417 . + . ID=gene-AD12_RS02175;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AD12_RS02175;old_locus_tag=AD12_4446 NZ_JJLK01000087.1 Protein Homology CDS 2791 3417 . + 0 ID=cds-WP_000725337.1;Parent=gene-AD12_RS02175;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AD12_RS02175;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 3572 5002 . + . ID=gene-AD12_RS02170;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=protein_coding;locus_tag=AD12_RS02170;old_locus_tag=AD12_4448 NZ_JJLK01000087.1 Protein Homology CDS 3572 5002 . + 0 ID=cds-WP_000581436.1;Parent=gene-AD12_RS02170;Dbxref=GenBank:WP_000581436.1;Name=WP_000581436.1;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AD12_RS02170;product=YdgA family protein;protein_id=WP_000581436.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 5043 5975 . - . ID=gene-AD12_RS02165;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AD12_RS02165;old_locus_tag=AD12_4449 NZ_JJLK01000087.1 Protein Homology CDS 5043 5975 . - 0 ID=cds-WP_001303740.1;Parent=gene-AD12_RS02165;Dbxref=GenBank:WP_001303740.1;Name=WP_001303740.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AD12_RS02165;product=acyltransferase;protein_id=WP_001303740.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 6339 9125 . + . ID=gene-AD12_RS02160;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AD12_RS02160;old_locus_tag=AD12_4451 NZ_JJLK01000087.1 Protein Homology CDS 6339 9125 . + 0 ID=cds-WP_000250055.1;Parent=gene-AD12_RS02160;Dbxref=GenBank:WP_000250055.1;Name=WP_000250055.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AD12_RS02160;product=DNA polymerase I;protein_id=WP_000250055.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 9507 10139 . - . ID=gene-AD12_RS02155;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AD12_RS02155;old_locus_tag=AD12_4453 NZ_JJLK01000087.1 Protein Homology CDS 9507 10139 . - 0 ID=cds-WP_000183349.1;Parent=gene-AD12_RS02155;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AD12_RS02155;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JJLK01000087.1 RefSeq pseudogene 10436 10602 . + . ID=gene-AD12_RS29615;Name=AD12_RS29615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29615;pseudo=true NZ_JJLK01000087.1 Protein Homology CDS 10436 10602 . + 0 ID=cds-AD12_RS29615;Parent=gene-AD12_RS29615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AD12_RS29615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 10721 11230 . + . ID=gene-AD12_RS02150;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AD12_RS02150;old_locus_tag=AD12_4454 NZ_JJLK01000087.1 Protein Homology CDS 10721 11230 . + 0 ID=cds-WP_001350037.1;Parent=gene-AD12_RS02150;Dbxref=GenBank:WP_001350037.1;Name=WP_001350037.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=AD12_RS02150;product=Der GTPase-activating protein YihI;protein_id=WP_001350037.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 11419 12792 . + . ID=gene-AD12_RS02145;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AD12_RS02145;old_locus_tag=AD12_4456 NZ_JJLK01000087.1 Protein Homology CDS 11419 12792 . + 0 ID=cds-WP_032286784.1;Parent=gene-AD12_RS02145;Dbxref=GenBank:WP_032286784.1;Name=WP_032286784.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AD12_RS02145;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032286784.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 12982 13092 . - . ID=gene-AD12_RS0125375;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AD12_RS0125375 NZ_JJLK01000087.1 Protein Homology CDS 12982 13092 . - 0 ID=cds-WP_000893994.1;Parent=gene-AD12_RS0125375;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AD12_RS0125375;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 13204 14613 . - . ID=gene-AD12_RS02140;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AD12_RS02140;old_locus_tag=AD12_4458 NZ_JJLK01000087.1 Protein Homology CDS 13204 14613 . - 0 ID=cds-WP_001188776.1;Parent=gene-AD12_RS02140;Dbxref=GenBank:WP_001188776.1;Name=WP_001188776.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AD12_RS02140;product=nitrogen regulation protein NR(I);protein_id=WP_001188776.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 14625 15674 . - . ID=gene-AD12_RS02135;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AD12_RS02135;old_locus_tag=AD12_4459 NZ_JJLK01000087.1 Protein Homology CDS 14625 15674 . - 0 ID=cds-WP_000190577.1;Parent=gene-AD12_RS02135;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AD12_RS02135;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 15993 17402 . - . ID=gene-AD12_RS02130;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AD12_RS02130;old_locus_tag=AD12_4460 NZ_JJLK01000087.1 Protein Homology CDS 15993 17402 . - 0 ID=cds-WP_001271717.1;Parent=gene-AD12_RS02130;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AD12_RS02130;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 17775 19598 . + . ID=gene-AD12_RS02125;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AD12_RS02125;old_locus_tag=AD12_4461 NZ_JJLK01000087.1 Protein Homology CDS 17775 19598 . + 0 ID=cds-WP_000570668.1;Parent=gene-AD12_RS02125;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AD12_RS02125;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 19815 20525 . + . ID=gene-AD12_RS02120;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AD12_RS02120;old_locus_tag=AD12_4462 NZ_JJLK01000087.1 Protein Homology CDS 19815 20525 . + 0 ID=cds-WP_000829800.1;Parent=gene-AD12_RS02120;Dbxref=GenBank:WP_000829800.1;Name=WP_000829800.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AD12_RS02120;product=GntR family transcriptional regulator;protein_id=WP_000829800.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 20533 21513 . + . ID=gene-AD12_RS02115;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AD12_RS02115;old_locus_tag=AD12_4463 NZ_JJLK01000087.1 Protein Homology CDS 20533 21513 . + 0 ID=cds-WP_000256399.1;Parent=gene-AD12_RS02115;Dbxref=GenBank:WP_000256399.1;Name=WP_000256399.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AD12_RS02115;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000256399.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 21615 22880 . + . ID=gene-AD12_RS02110;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AD12_RS02110;old_locus_tag=AD12_4464 NZ_JJLK01000087.1 Protein Homology CDS 21615 22880 . + 0 ID=cds-WP_000956320.1;Parent=gene-AD12_RS02110;Dbxref=GenBank:WP_000956320.1;Name=WP_000956320.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312823.1;locus_tag=AD12_RS02110;product=MFS transporter;protein_id=WP_000956320.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 22971 23663 . - . ID=gene-AD12_RS02105;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AD12_RS02105;old_locus_tag=AD12_4465 NZ_JJLK01000087.1 Protein Homology CDS 22971 23663 . - 0 ID=cds-WP_000723472.1;Parent=gene-AD12_RS02105;Dbxref=GenBank:WP_000723472.1;Name=WP_000723472.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AD12_RS02105;product=porin OmpL;protein_id=WP_000723472.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 23731 25134 . - . ID=gene-AD12_RS02100;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;locus_tag=AD12_RS02100;old_locus_tag=AD12_4466 NZ_JJLK01000087.1 Protein Homology CDS 23731 25134 . - 0 ID=cds-WP_032286785.1;Parent=gene-AD12_RS02100;Dbxref=GenBank:WP_032286785.1;Name=WP_032286785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihO;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026275.1;locus_tag=AD12_RS02100;product=MFS transporter;protein_id=WP_032286785.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 25177 26562 . - . ID=gene-AD12_RS02095;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;locus_tag=AD12_RS02095;old_locus_tag=AD12_4467 NZ_JJLK01000087.1 Protein Homology CDS 25177 26562 . - 0 ID=cds-WP_000018387.1;Parent=gene-AD12_RS02095;Dbxref=GenBank:WP_000018387.1;Name=WP_000018387.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312826.1;locus_tag=AD12_RS02095;product=MFS transporter;protein_id=WP_000018387.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 26608 28644 . - . ID=gene-AD12_RS02090;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AD12_RS02090;old_locus_tag=AD12_4468 NZ_JJLK01000087.1 Protein Homology CDS 26608 28644 . - 0 ID=cds-WP_000380839.1;Parent=gene-AD12_RS02090;Dbxref=GenBank:WP_000380839.1;Name=WP_000380839.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418314.1;locus_tag=AD12_RS02090;product=sulfoquinovosidase;protein_id=WP_000380839.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 28843 29745 . - . ID=gene-AD12_RS02085;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;locus_tag=AD12_RS02085;old_locus_tag=AD12_4469 NZ_JJLK01000087.1 Protein Homology CDS 28843 29745 . - 0 ID=cds-WP_001167553.1;Parent=gene-AD12_RS02085;Dbxref=GenBank:WP_001167553.1;Name=WP_001167553.1;gbkey=CDS;gene=yihR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709679.2;locus_tag=AD12_RS02085;product=aldose-1-epimerase;protein_id=WP_001167553.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 29883 31124 . - . ID=gene-AD12_RS02080;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AD12_RS02080;old_locus_tag=AD12_4470 NZ_JJLK01000087.1 Protein Homology CDS 29883 31124 . - 0 ID=cds-WP_032286787.1;Parent=gene-AD12_RS02080;Dbxref=GenBank:WP_032286787.1;Name=WP_032286787.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AD12_RS02080;product=sulfoquinovose isomerase;protein_id=WP_032286787.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 31141 32019 . - . ID=gene-AD12_RS02075;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AD12_RS02075;old_locus_tag=AD12_4471 NZ_JJLK01000087.1 Protein Homology CDS 31141 32019 . - 0 ID=cds-WP_001046453.1;Parent=gene-AD12_RS02075;Dbxref=GenBank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AD12_RS02075;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 32043 32939 . - . ID=gene-AD12_RS02070;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AD12_RS02070;old_locus_tag=AD12_4472 NZ_JJLK01000087.1 Protein Homology CDS 32043 32939 . - 0 ID=cds-WP_000718896.1;Parent=gene-AD12_RS02070;Dbxref=GenBank:WP_000718896.1;Name=WP_000718896.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AD12_RS02070;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718896.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 33107 34003 . + . ID=gene-AD12_RS02065;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AD12_RS02065;old_locus_tag=AD12_4473 NZ_JJLK01000087.1 Protein Homology CDS 33107 34003 . + 0 ID=cds-WP_000621656.1;Parent=gene-AD12_RS02065;Dbxref=GenBank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AD12_RS02065;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 34037 34822 . + . ID=gene-AD12_RS02060;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AD12_RS02060;old_locus_tag=AD12_4474 NZ_JJLK01000087.1 Protein Homology CDS 34037 34822 . + 0 ID=cds-WP_000059678.1;Parent=gene-AD12_RS02060;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AD12_RS02060;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 34921 35520 . + . ID=gene-AD12_RS02055;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AD12_RS02055;old_locus_tag=AD12_4475 NZ_JJLK01000087.1 Protein Homology CDS 34921 35520 . + 0 ID=cds-WP_001295269.1;Parent=gene-AD12_RS02055;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AD12_RS02055;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 35514 36386 . + . ID=gene-AD12_RS02050;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AD12_RS02050;old_locus_tag=AD12_4476 NZ_JJLK01000087.1 Protein Homology CDS 35514 36386 . + 0 ID=cds-WP_000920762.1;Parent=gene-AD12_RS02050;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AD12_RS02050;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 36383 36820 . + . ID=gene-AD12_RS02045;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AD12_RS02045;old_locus_tag=AD12_4477 NZ_JJLK01000087.1 Protein Homology CDS 36383 36820 . + 0 ID=cds-WP_000560983.1;Parent=gene-AD12_RS02045;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AD12_RS02045;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 36865 37806 . + . ID=gene-AD12_RS02040;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AD12_RS02040;old_locus_tag=AD12_4478 NZ_JJLK01000087.1 Protein Homology CDS 36865 37806 . + 0 ID=cds-WP_001343389.1;Parent=gene-AD12_RS02040;Dbxref=GenBank:WP_001343389.1;Name=WP_001343389.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AD12_RS02040;product=fatty acid biosynthesis protein FabY;protein_id=WP_001343389.1;transl_table=11 NZ_JJLK01000087.1 RefSeq pseudogene 38170 38286 . + . ID=gene-AD12_RS29960;Name=AD12_RS29960;end_range=38286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29960;old_locus_tag=AD12_4479;partial=true;pseudo=true NZ_JJLK01000087.1 Protein Homology CDS 38170 38286 . + 0 ID=cds-AD12_RS29960;Parent=gene-AD12_RS29960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=38286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AD12_RS29960;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 38663 38881 . + . ID=gene-AD12_RS02035;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AD12_RS02035;old_locus_tag=AD12_4480 NZ_JJLK01000087.1 Protein Homology CDS 38663 38881 . + 0 ID=cds-WP_001295676.1;Parent=gene-AD12_RS02035;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AD12_RS02035;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 39099 39341 . + . ID=gene-AD12_RS02030;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AD12_RS02030;old_locus_tag=AD12_4481 NZ_JJLK01000087.1 Protein Homology CDS 39099 39341 . + 0 ID=cds-WP_001086388.1;Parent=gene-AD12_RS02030;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AD12_RS02030;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 39671 40600 . - . ID=gene-AD12_RS02025;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AD12_RS02025;old_locus_tag=AD12_4482 NZ_JJLK01000087.1 Protein Homology CDS 39671 40600 . - 0 ID=cds-WP_000027705.1;Parent=gene-AD12_RS02025;Dbxref=GenBank:WP_000027705.1;Name=WP_000027705.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AD12_RS02025;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027705.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 40597 41232 . - . ID=gene-AD12_RS02020;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AD12_RS02020;old_locus_tag=AD12_4483 NZ_JJLK01000087.1 Protein Homology CDS 40597 41232 . - 0 ID=cds-WP_000829013.1;Parent=gene-AD12_RS02020;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AD12_RS02020;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 41229 42131 . - . ID=gene-AD12_RS02015;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AD12_RS02015;old_locus_tag=AD12_4484 NZ_JJLK01000087.1 Protein Homology CDS 41229 42131 . - 0 ID=cds-WP_000331387.1;Parent=gene-AD12_RS02015;Dbxref=GenBank:WP_000331387.1;Name=WP_000331387.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AD12_RS02015;product=formate dehydrogenase O subunit beta;protein_id=WP_000331387.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 42144 45194 . - . ID=gene-AD12_RS02010;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD12_RS02010;old_locus_tag=AD12_4485 NZ_JJLK01000087.1 Protein Homology CDS 42144 45194 . - 0 ID=cds-WP_011310337.1;Parent=gene-AD12_RS02010;Dbxref=GenBank:WP_011310337.1;Name=WP_011310337.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AD12_RS02010;product=formate dehydrogenase-N subunit alpha;protein_id=WP_011310337.1;transl_except=(pos:complement(44607..44609)%2Caa:Sec);transl_table=11 NZ_JJLK01000087.1 RefSeq gene 45388 46221 . + . ID=gene-AD12_RS02000;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AD12_RS02000;old_locus_tag=AD12_4488 NZ_JJLK01000087.1 Protein Homology CDS 45388 46221 . + 0 ID=cds-WP_000753617.1;Parent=gene-AD12_RS02000;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AD12_RS02000;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 46374 47414 . + . ID=gene-AD12_RS0125395;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AD12_RS0125395 NZ_JJLK01000087.1 Protein Homology CDS 46374 47414 . + 0 ID=cds-WP_001317404.1;Parent=gene-AD12_RS0125395;Dbxref=GenBank:WP_001317404.1;Name=WP_001317404.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AD12_RS0125395;product=YiiG family protein;protein_id=WP_001317404.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 47464 49212 . - . ID=gene-AD12_RS01995;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=AD12_RS01995;old_locus_tag=AD12_4490 NZ_JJLK01000087.1 Protein Homology CDS 47464 49212 . - 0 ID=cds-WP_000931307.1;Parent=gene-AD12_RS01995;Dbxref=GenBank:WP_000931307.1;Name=WP_000931307.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312850.1;locus_tag=AD12_RS01995;product=putative frv operon regulatory protein;protein_id=WP_000931307.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 49212 50282 . - . ID=gene-AD12_RS01990;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AD12_RS01990;old_locus_tag=AD12_4491 NZ_JJLK01000087.1 Protein Homology CDS 49212 50282 . - 0 ID=cds-WP_001019492.1;Parent=gene-AD12_RS01990;Dbxref=GenBank:WP_001019492.1;Name=WP_001019492.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709702.2;locus_tag=AD12_RS01990;product=aminopeptidase;protein_id=WP_001019492.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 50272 51723 . - . ID=gene-AD12_RS01985;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AD12_RS01985;old_locus_tag=AD12_4492 NZ_JJLK01000087.1 Protein Homology CDS 50272 51723 . - 0 ID=cds-WP_000446018.1;Parent=gene-AD12_RS01985;Dbxref=GenBank:WP_000446018.1;Name=WP_000446018.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AD12_RS01985;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446018.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 51734 52180 . - . ID=gene-AD12_RS01980;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AD12_RS01980;old_locus_tag=AD12_4493 NZ_JJLK01000087.1 Protein Homology CDS 51734 52180 . - 0 ID=cds-WP_000729597.1;Parent=gene-AD12_RS01980;Dbxref=GenBank:WP_000729597.1;Name=WP_000729597.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709704.1;locus_tag=AD12_RS01980;product=PTS fructose transporter subunit IIA;protein_id=WP_000729597.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 52481 52795 . - . ID=gene-AD12_RS01975;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AD12_RS01975;old_locus_tag=AD12_4494 NZ_JJLK01000087.1 Protein Homology CDS 52481 52795 . - 0 ID=cds-WP_000619503.1;Parent=gene-AD12_RS01975;Dbxref=GenBank:WP_000619503.1;Name=WP_000619503.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AD12_RS01975;product=L-rhamnose mutarotase;protein_id=WP_000619503.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 52805 53629 . - . ID=gene-AD12_RS01970;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AD12_RS01970;old_locus_tag=AD12_4495 NZ_JJLK01000087.1 Protein Homology CDS 52805 53629 . - 0 ID=cds-WP_001179723.1;Parent=gene-AD12_RS01970;Dbxref=GenBank:WP_001179723.1;Name=WP_001179723.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312856.1;locus_tag=AD12_RS01970;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179723.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 53712 54971 . - . ID=gene-AD12_RS01965;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AD12_RS01965;old_locus_tag=AD12_4496 NZ_JJLK01000087.1 Protein Homology CDS 53712 54971 . - 0 ID=cds-WP_000211501.1;Parent=gene-AD12_RS01965;Dbxref=GenBank:WP_000211501.1;Name=WP_000211501.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709707.2;locus_tag=AD12_RS01965;product=L-rhamnose isomerase;protein_id=WP_000211501.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 54968 56437 . - . ID=gene-AD12_RS01960;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AD12_RS01960;old_locus_tag=AD12_4497 NZ_JJLK01000087.1 Protein Homology CDS 54968 56437 . - 0 ID=cds-WP_000144072.1;Parent=gene-AD12_RS01960;Dbxref=GenBank:WP_000144072.1;Name=WP_000144072.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=AD12_RS01960;product=rhamnulokinase;protein_id=WP_000144072.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 56725 57561 . + . ID=gene-AD12_RS01950;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AD12_RS01950;old_locus_tag=AD12_4499 NZ_JJLK01000087.1 Protein Homology CDS 56725 57561 . + 0 ID=cds-WP_000217139.1;Parent=gene-AD12_RS01950;Dbxref=GenBank:WP_000217139.1;Name=WP_000217139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AD12_RS01950;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217139.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 57635 58483 . + . ID=gene-AD12_RS01945;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AD12_RS01945;old_locus_tag=AD12_4500 NZ_JJLK01000087.1 Protein Homology CDS 57635 58483 . + 0 ID=cds-WP_001298410.1;Parent=gene-AD12_RS01945;Dbxref=GenBank:WP_001298410.1;Name=WP_001298410.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AD12_RS01945;product=HTH-type transcriptional activator RhaR;protein_id=WP_001298410.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 58480 59514 . - . ID=gene-AD12_RS01940;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AD12_RS01940;old_locus_tag=AD12_4501 NZ_JJLK01000087.1 Protein Homology CDS 58480 59514 . - 0 ID=cds-WP_000063489.1;Parent=gene-AD12_RS01940;Dbxref=GenBank:WP_000063489.1;Name=WP_000063489.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AD12_RS01940;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063489.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 59799 60419 . + . ID=gene-AD12_RS01935;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AD12_RS01935;old_locus_tag=AD12_4502 NZ_JJLK01000087.1 Protein Homology CDS 59799 60419 . + 0 ID=cds-WP_001297064.1;Parent=gene-AD12_RS01935;Dbxref=GenBank:WP_001297064.1;Name=WP_001297064.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AD12_RS01935;product=superoxide dismutase [Mn];protein_id=WP_001297064.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 60679 61662 . + . ID=gene-AD12_RS01925;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AD12_RS01925;old_locus_tag=AD12_4504 NZ_JJLK01000087.1 Protein Homology CDS 60679 61662 . + 0 ID=cds-WP_001166066.1;Parent=gene-AD12_RS01925;Dbxref=GenBank:WP_001166066.1;Name=WP_001166066.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AD12_RS01925;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166066.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 61811 62485 . + . ID=gene-AD12_RS01920;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AD12_RS01920;old_locus_tag=AD12_4505 NZ_JJLK01000087.1 Protein Homology CDS 61811 62485 . + 0 ID=cds-WP_001270266.1;Parent=gene-AD12_RS01920;Dbxref=GenBank:WP_001270266.1;Name=WP_001270266.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AD12_RS01920;product=6-hydroxyaminopurine reductase;protein_id=WP_001270266.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 62591 63964 . - . ID=gene-AD12_RS01915;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AD12_RS01915;old_locus_tag=AD12_4506 NZ_JJLK01000087.1 Protein Homology CDS 62591 63964 . - 0 ID=cds-WP_000580417.1;Parent=gene-AD12_RS01915;Dbxref=GenBank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AD12_RS01915;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 63961 64659 . - . ID=gene-AD12_RS01910;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AD12_RS01910;old_locus_tag=AD12_4507 NZ_JJLK01000087.1 Protein Homology CDS 63961 64659 . - 0 ID=cds-WP_001033722.1;Parent=gene-AD12_RS01910;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AD12_RS01910;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 64809 65309 . + . ID=gene-AD12_RS01905;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AD12_RS01905;old_locus_tag=AD12_4508 NZ_JJLK01000087.1 Protein Homology CDS 64809 65309 . + 0 ID=cds-WP_001223800.1;Parent=gene-AD12_RS01905;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AD12_RS01905;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 65458 66360 . + . ID=gene-AD12_RS01900;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AD12_RS01900;old_locus_tag=AD12_4509 NZ_JJLK01000087.1 Protein Homology CDS 65458 66360 . + 0 ID=cds-WP_001076748.1;Parent=gene-AD12_RS01900;Dbxref=GenBank:WP_001076748.1;Name=WP_001076748.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709720.2;locus_tag=AD12_RS01900;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076748.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 66541 67503 . + . ID=gene-AD12_RS01895;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AD12_RS01895;old_locus_tag=AD12_4510 NZ_JJLK01000087.1 Protein Homology CDS 66541 67503 . + 0 ID=cds-WP_000591795.1;Parent=gene-AD12_RS01895;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AD12_RS01895;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 67823 68812 . + . ID=gene-AD12_RS01890;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AD12_RS01890;old_locus_tag=AD12_4511 NZ_JJLK01000087.1 Protein Homology CDS 67823 68812 . + 0 ID=cds-WP_001045689.1;Parent=gene-AD12_RS01890;Dbxref=GenBank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AD12_RS01890;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 68919 69674 . + . ID=gene-AD12_RS01885;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AD12_RS01885;old_locus_tag=AD12_4512 NZ_JJLK01000087.1 Protein Homology CDS 68919 69674 . + 0 ID=cds-WP_001324361.1;Parent=gene-AD12_RS01885;Dbxref=GenBank:WP_001324361.1;Name=WP_001324361.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AD12_RS01885;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001324361.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 69729 70496 . - . ID=gene-AD12_RS01880;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AD12_RS01880;old_locus_tag=AD12_4513 NZ_JJLK01000087.1 Protein Homology CDS 69729 70496 . - 0 ID=cds-WP_001216325.1;Parent=gene-AD12_RS01880;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AD12_RS01880;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 70604 71203 . - . ID=gene-AD12_RS01875;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AD12_RS01875;old_locus_tag=AD12_4514 NZ_JJLK01000087.1 Protein Homology CDS 70604 71203 . - 0 ID=cds-WP_000802226.1;Parent=gene-AD12_RS01875;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AD12_RS01875;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 71304 71744 . + . ID=gene-AD12_RS01870;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AD12_RS01870;old_locus_tag=AD12_4515 NZ_JJLK01000087.1 Protein Homology CDS 71304 71744 . + 0 ID=cds-WP_000155257.1;Parent=gene-AD12_RS01870;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AD12_RS01870;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 71956 72255 . + . ID=gene-AD12_RS01865;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AD12_RS01865;old_locus_tag=AD12_4516 NZ_JJLK01000087.1 Protein Homology CDS 71956 72255 . + 0 ID=cds-WP_000655986.1;Parent=gene-AD12_RS01865;Dbxref=GenBank:WP_000655986.1;Name=WP_000655986.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312874.1;locus_tag=AD12_RS01865;product=DUF406 domain-containing protein;protein_id=WP_000655986.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 72282 72710 . + . ID=gene-AD12_RS01860;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AD12_RS01860;old_locus_tag=AD12_4517 NZ_JJLK01000087.1 Protein Homology CDS 72282 72710 . + 0 ID=cds-WP_000323556.1;Parent=gene-AD12_RS01860;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AD12_RS01860;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 72715 73461 . - . ID=gene-AD12_RS01855;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AD12_RS01855;old_locus_tag=AD12_4518 NZ_JJLK01000087.1 Protein Homology CDS 72715 73461 . - 0 ID=cds-WP_000796320.1;Parent=gene-AD12_RS01855;Dbxref=GenBank:WP_000796320.1;Name=WP_000796320.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709728.1;locus_tag=AD12_RS01855;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796320.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 73558 74568 . - . ID=gene-AD12_RS01850;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD12_RS01850;old_locus_tag=AD12_4519 NZ_JJLK01000087.1 Protein Homology CDS 73558 74568 . - 0 ID=cds-WP_001250644.1;Parent=gene-AD12_RS01850;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AD12_RS01850;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 74701 76209 . - . ID=gene-AD12_RS01845;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AD12_RS01845;old_locus_tag=AD12_4520 NZ_JJLK01000087.1 Protein Homology CDS 74701 76209 . - 0 ID=cds-WP_000136782.1;Parent=gene-AD12_RS01845;Dbxref=GenBank:WP_000136782.1;Name=WP_000136782.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AD12_RS01845;product=glycerol kinase GlpK;protein_id=WP_000136782.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 76232 77077 . - . ID=gene-AD12_RS01840;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AD12_RS01840;old_locus_tag=AD12_4521 NZ_JJLK01000087.1 Protein Homology CDS 76232 77077 . - 0 ID=cds-WP_000084268.1;Parent=gene-AD12_RS01840;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AD12_RS01840;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 77502 77747 . + . ID=gene-AD12_RS01835;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AD12_RS01835;old_locus_tag=AD12_4522 NZ_JJLK01000087.1 Protein Homology CDS 77502 77747 . + 0 ID=cds-WP_001296623.1;Parent=gene-AD12_RS01835;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AD12_RS01835;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 77832 78317 . - . ID=gene-AD12_RS01830;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AD12_RS01830;old_locus_tag=AD12_4523 NZ_JJLK01000087.1 Protein Homology CDS 77832 78317 . - 0 ID=cds-WP_000872908.1;Parent=gene-AD12_RS01830;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AD12_RS01830;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 78410 79336 . - . ID=gene-AD12_RS01825;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AD12_RS01825;old_locus_tag=AD12_4524 NZ_JJLK01000087.1 Protein Homology CDS 78410 79336 . - 0 ID=cds-WP_000139496.1;Parent=gene-AD12_RS01825;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AD12_RS01825;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 79403 80734 . - . ID=gene-AD12_RS01820;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AD12_RS01820;old_locus_tag=AD12_4525 NZ_JJLK01000087.1 Protein Homology CDS 79403 80734 . - 0 ID=cds-WP_001293343.1;Parent=gene-AD12_RS01820;Dbxref=GenBank:WP_001293343.1;Name=WP_001293343.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AD12_RS01820;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293343.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 80744 81274 . - . ID=gene-AD12_RS01815;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AD12_RS01815;old_locus_tag=AD12_4526 NZ_JJLK01000087.1 Protein Homology CDS 80744 81274 . - 0 ID=cds-WP_000208242.1;Parent=gene-AD12_RS01815;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AD12_RS01815;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 81367 82326 . - . ID=gene-AD12_RS01810;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AD12_RS01810;old_locus_tag=AD12_4527 NZ_JJLK01000087.1 Protein Homology CDS 81367 82326 . - 0 ID=cds-WP_000068834.1;Parent=gene-AD12_RS01810;Dbxref=GenBank:WP_000068834.1;Name=WP_000068834.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709737.1;locus_tag=AD12_RS01810;product=cell division protein FtsN;protein_id=WP_000068834.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 82418 83443 . - . ID=gene-AD12_RS0125400;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AD12_RS0125400;old_locus_tag=AD12_4528 NZ_JJLK01000087.1 Protein Homology CDS 82418 83443 . - 0 ID=cds-WP_000644904.1;Parent=gene-AD12_RS0125400;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AD12_RS0125400;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 83599 85797 . - . ID=gene-AD12_RS01805;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AD12_RS01805;old_locus_tag=AD12_4530 NZ_JJLK01000087.1 Protein Homology CDS 83599 85797 . - 0 ID=cds-WP_001324365.1;Parent=gene-AD12_RS01805;Dbxref=GenBank:WP_001324365.1;Name=WP_001324365.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AD12_RS01805;product=primosomal protein N';protein_id=WP_001324365.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 86000 86212 . + . ID=gene-AD12_RS01800;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AD12_RS01800;old_locus_tag=AD12_4531 NZ_JJLK01000087.1 Protein Homology CDS 86000 86212 . + 0 ID=cds-WP_000710769.1;Parent=gene-AD12_RS01800;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AD12_RS01800;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JJLK01000087.1 RefSeq gene 86372 86643 . + . ID=gene-AD12_RS01795;Name=AD12_RS01795;end_range=86643,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01795;old_locus_tag=AD12_4532;partial=true NZ_JJLK01000087.1 Protein Homology CDS 86372 86643 . + 0 ID=cds-WP_001503079.1;Parent=gene-AD12_RS01795;Dbxref=GenBank:WP_001503079.1;Name=WP_001503079.1;end_range=86643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD12_RS01795;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001503079.1;transl_table=11 ##sequence-region NZ_JJLK01000088.1 1 43959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000088.1 RefSeq region 1 43959 . + . ID=NZ_JJLK01000088.1:1..43959;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000088.1 RefSeq gene 1 784 . + . ID=gene-AD12_RS01790;Name=AD12_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01790;old_locus_tag=AD12_4533;partial=true;start_range=.,1 NZ_JJLK01000088.1 Protein Homology CDS 1 784 . + 1 ID=cds-WP_187439335.1;Parent=gene-AD12_RS01790;Dbxref=GenBank:WP_187439335.1;Name=WP_187439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=AD12_RS01790;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_187439335.1;start_range=.,1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 786 1109 . + . ID=gene-AD12_RS29155;Name=AD12_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29155 NZ_JJLK01000088.1 Protein Homology CDS 786 1109 . + 0 ID=cds-WP_001323627.1;Parent=gene-AD12_RS29155;Dbxref=GenBank:WP_001323627.1;Name=WP_001323627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323627.1;locus_tag=AD12_RS29155;product=RHS element protein dsORF-f3;protein_id=WP_001323627.1;transl_table=11 NZ_JJLK01000088.1 RefSeq pseudogene 1179 1871 . - . ID=gene-AD12_RS28350;Name=AD12_RS28350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28350;pseudo=true NZ_JJLK01000088.1 Protein Homology CDS 1179 1871 . - 0 ID=cds-AD12_RS28350;Parent=gene-AD12_RS28350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AD12_RS28350;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 2016 2624 . - . ID=gene-AD12_RS01785;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AD12_RS01785;old_locus_tag=AD12_4534 NZ_JJLK01000088.1 Protein Homology CDS 2016 2624 . - 0 ID=cds-WP_000797341.1;Parent=gene-AD12_RS01785;Dbxref=GenBank:WP_000797341.1;Name=WP_000797341.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312893.1;locus_tag=AD12_RS01785;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797341.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 2808 3125 . - . ID=gene-AD12_RS01780;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AD12_RS01780;old_locus_tag=AD12_4535 NZ_JJLK01000088.1 Protein Homology CDS 2808 3125 . - 0 ID=cds-WP_000852812.1;Parent=gene-AD12_RS01780;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AD12_RS01780;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 3402 4562 . + . ID=gene-AD12_RS01775;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AD12_RS01775;old_locus_tag=AD12_4536 NZ_JJLK01000088.1 Protein Homology CDS 3402 4562 . + 0 ID=cds-WP_001297633.1;Parent=gene-AD12_RS01775;Dbxref=GenBank:WP_001297633.1;Name=WP_001297633.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AD12_RS01775;product=cystathionine gamma-synthase;protein_id=WP_001297633.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 4565 6997 . + . ID=gene-AD12_RS01770;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AD12_RS01770;old_locus_tag=AD12_4537 NZ_JJLK01000088.1 Protein Homology CDS 4565 6997 . + 0 ID=cds-WP_000110772.1;Parent=gene-AD12_RS01770;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AD12_RS01770;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 7136 7270 . - . ID=gene-AD12_RS29750;Name=AD12_RS29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29750;old_locus_tag=AD12_4538 NZ_JJLK01000088.1 GeneMarkS-2+ CDS 7136 7270 . - 0 ID=cds-WP_000660586.1;Parent=gene-AD12_RS29750;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29750;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 7346 8236 . + . ID=gene-AD12_RS01760;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AD12_RS01760;old_locus_tag=AD12_4539 NZ_JJLK01000088.1 Protein Homology CDS 7346 8236 . + 0 ID=cds-WP_000007523.1;Parent=gene-AD12_RS01760;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AD12_RS01760;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 8565 10745 . + . ID=gene-AD12_RS01755;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AD12_RS01755;old_locus_tag=AD12_4540 NZ_JJLK01000088.1 Protein Homology CDS 8565 10745 . + 0 ID=cds-WP_001297636.1;Parent=gene-AD12_RS01755;Dbxref=GenBank:WP_001297636.1;Name=WP_001297636.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=AD12_RS01755;product=catalase/peroxidase HPI;protein_id=WP_001297636.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 10839 11744 . + . ID=gene-AD12_RS01750;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AD12_RS01750;old_locus_tag=AD12_4541 NZ_JJLK01000088.1 Protein Homology CDS 10839 11744 . + 0 ID=cds-WP_001323623.1;Parent=gene-AD12_RS01750;Dbxref=GenBank:WP_001323623.1;Name=WP_001323623.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AD12_RS01750;product=cystine transporter YijE;protein_id=WP_001323623.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 11771 12388 . - . ID=gene-AD12_RS01745;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AD12_RS01745;old_locus_tag=AD12_4542 NZ_JJLK01000088.1 Protein Homology CDS 11771 12388 . - 0 ID=cds-WP_032178136.1;Parent=gene-AD12_RS01745;Dbxref=GenBank:WP_032178136.1;Name=WP_032178136.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AD12_RS01745;product=DUF1287 domain-containing protein;protein_id=WP_032178136.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 12663 13766 . - . ID=gene-AD12_RS01740;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AD12_RS01740;old_locus_tag=AD12_4543 NZ_JJLK01000088.1 Protein Homology CDS 12663 13766 . - 0 ID=cds-WP_000374004.1;Parent=gene-AD12_RS01740;Dbxref=GenBank:WP_000374004.1;Name=WP_000374004.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AD12_RS01740;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 13777 14439 . - . ID=gene-AD12_RS01735;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD12_RS01735;old_locus_tag=AD12_4544 NZ_JJLK01000088.1 Protein Homology CDS 13777 14439 . - 0 ID=cds-WP_000424845.1;Parent=gene-AD12_RS01735;Dbxref=GenBank:WP_000424845.1;Name=WP_000424845.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312902.1;locus_tag=AD12_RS01735;product=fructose-6-phosphate aldolase;protein_id=WP_000424845.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 14451 16952 . - . ID=gene-AD12_RS01730;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD12_RS01730;old_locus_tag=AD12_4545 NZ_JJLK01000088.1 Protein Homology CDS 14451 16952 . - 0 ID=cds-WP_001174083.1;Parent=gene-AD12_RS01730;Dbxref=GenBank:WP_001174083.1;Name=WP_001174083.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AD12_RS01730;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001174083.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 17261 18340 . + . ID=gene-AD12_RS01725;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AD12_RS01725;old_locus_tag=AD12_4546 NZ_JJLK01000088.1 Protein Homology CDS 17261 18340 . + 0 ID=cds-WP_001004451.1;Parent=gene-AD12_RS01725;Dbxref=GenBank:WP_001004451.1;Name=WP_001004451.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AD12_RS01725;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004451.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 18355 18675 . + . ID=gene-AD12_RS01720;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AD12_RS01720;old_locus_tag=AD12_4547 NZ_JJLK01000088.1 Protein Homology CDS 18355 18675 . + 0 ID=cds-WP_000161265.1;Parent=gene-AD12_RS01720;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AD12_RS01720;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 18726 21023 . + . ID=gene-AD12_RS01715;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AD12_RS01715;old_locus_tag=AD12_4548 NZ_JJLK01000088.1 Protein Homology CDS 18726 21023 . + 0 ID=cds-WP_000184821.1;Parent=gene-AD12_RS01715;Dbxref=GenBank:WP_000184821.1;Name=WP_000184821.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709751.1;locus_tag=AD12_RS01715;product=formate C-acetyltransferase;protein_id=WP_000184821.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 20989 21867 . + . ID=gene-AD12_RS01710;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AD12_RS01710;old_locus_tag=AD12_4549 NZ_JJLK01000088.1 Protein Homology CDS 20989 21867 . + 0 ID=cds-WP_000204139.1;Parent=gene-AD12_RS01710;Dbxref=GenBank:WP_000204139.1;Name=WP_000204139.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312908.3;locus_tag=AD12_RS01710;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204139.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 21869 22210 . + . ID=gene-AD12_RS01705;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AD12_RS01705;old_locus_tag=AD12_4550 NZ_JJLK01000088.1 Protein Homology CDS 21869 22210 . + 0 ID=cds-WP_000323849.1;Parent=gene-AD12_RS01705;Dbxref=GenBank:WP_000323849.1;Name=WP_000323849.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709753.1;locus_tag=AD12_RS01705;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323849.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 22197 23048 . - . ID=gene-AD12_RS01700;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AD12_RS01700;old_locus_tag=AD12_4551 NZ_JJLK01000088.1 Protein Homology CDS 22197 23048 . - 0 ID=cds-WP_000274636.1;Parent=gene-AD12_RS01700;Dbxref=GenBank:WP_000274636.1;Name=WP_000274636.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=AD12_RS01700;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 23197 24930 . - . ID=gene-AD12_RS01695;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AD12_RS01695;old_locus_tag=AD12_4552 NZ_JJLK01000088.1 Protein Homology CDS 23197 24930 . - 0 ID=cds-WP_000556293.1;Parent=gene-AD12_RS01695;Dbxref=GenBank:WP_000556293.1;Name=WP_000556293.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AD12_RS01695;product=phosphoethanolamine transferase CptA;protein_id=WP_000556293.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 25113 27764 . - . ID=gene-AD12_RS01690;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AD12_RS01690;old_locus_tag=AD12_4553 NZ_JJLK01000088.1 Protein Homology CDS 25113 27764 . - 0 ID=cds-WP_001388743.1;Parent=gene-AD12_RS01690;Dbxref=GenBank:WP_001388743.1;Name=WP_001388743.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AD12_RS01690;product=phosphoenolpyruvate carboxylase;protein_id=WP_001388743.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 28116 29267 . - . ID=gene-AD12_RS01685;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AD12_RS01685;old_locus_tag=AD12_4554 NZ_JJLK01000088.1 Protein Homology CDS 28116 29267 . - 0 ID=cds-WP_001295506.1;Parent=gene-AD12_RS01685;Dbxref=GenBank:WP_001295506.1;Name=WP_001295506.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AD12_RS01685;product=acetylornithine deacetylase;protein_id=WP_001295506.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 29421 30425 . + . ID=gene-AD12_RS01680;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AD12_RS01680;old_locus_tag=AD12_4555 NZ_JJLK01000088.1 Protein Homology CDS 29421 30425 . + 0 ID=cds-WP_000935370.1;Parent=gene-AD12_RS01680;Dbxref=GenBank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AD12_RS01680;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 30433 31209 . + . ID=gene-AD12_RS01675;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AD12_RS01675;old_locus_tag=AD12_4556 NZ_JJLK01000088.1 Protein Homology CDS 30433 31209 . + 0 ID=cds-WP_001302318.1;Parent=gene-AD12_RS01675;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AD12_RS01675;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 31270 32643 . + . ID=gene-AD12_RS01670;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AD12_RS01670;old_locus_tag=AD12_4557 NZ_JJLK01000088.1 Protein Homology CDS 31270 32643 . + 0 ID=cds-WP_001230081.1;Parent=gene-AD12_RS01670;Dbxref=GenBank:WP_001230081.1;Name=WP_001230081.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709760.1;locus_tag=AD12_RS01670;product=argininosuccinate lyase;protein_id=WP_001230081.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 33141 34355 . + . ID=gene-AD12_RS01665;Name=manD;gbkey=Gene;gene=manD;gene_biotype=protein_coding;locus_tag=AD12_RS01665;old_locus_tag=AD12_4558 NZ_JJLK01000088.1 Protein Homology CDS 33141 34355 . + 0 ID=cds-WP_000690934.1;Parent=gene-AD12_RS01665;Dbxref=GenBank:WP_000690934.1;Name=WP_000690934.1;Ontology_term=GO:0016052,GO:0008927;gbkey=CDS;gene=manD;go_function=mannonate dehydratase activity|0008927||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AD12_RS01665;product=D-mannonate dehydratase ManD;protein_id=WP_000690934.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 34422 35705 . + . ID=gene-AD12_RS01660;Name=AD12_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01660;old_locus_tag=AD12_4559 NZ_JJLK01000088.1 Protein Homology CDS 34422 35705 . + 0 ID=cds-WP_032286791.1;Parent=gene-AD12_RS01660;Dbxref=GenBank:WP_032286791.1;Name=WP_032286791.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000382182.1;locus_tag=AD12_RS01660;product=MFS transporter;protein_id=WP_032286791.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 35957 36874 . + . ID=gene-AD12_RS01655;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AD12_RS01655;old_locus_tag=AD12_4560 NZ_JJLK01000088.1 Protein Homology CDS 35957 36874 . + 0 ID=cds-WP_001025939.1;Parent=gene-AD12_RS01655;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AD12_RS01655;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 36857 38257 . - . ID=gene-AD12_RS01650;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AD12_RS01650;old_locus_tag=AD12_4561 NZ_JJLK01000088.1 Protein Homology CDS 36857 38257 . - 0 ID=cds-WP_001120810.1;Parent=gene-AD12_RS01650;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AD12_RS01650;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JJLK01000088.1 RefSeq pseudogene 38588 39239 . + . ID=gene-AD12_RS01640;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=pseudogene;locus_tag=AD12_RS01640;old_locus_tag=AD12_4564;pseudo=true NZ_JJLK01000088.1 Protein Homology CDS 38588 39239 . + 0 ID=cds-AD12_RS01640;Parent=gene-AD12_RS01640;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AD12_RS01640;product=HTH-type transcriptional repressor FabR;pseudo=true;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 39239 39598 . + . ID=gene-AD12_RS01635;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AD12_RS01635;old_locus_tag=AD12_4565 NZ_JJLK01000088.1 Protein Homology CDS 39239 39598 . + 0 ID=cds-WP_000806411.1;Parent=gene-AD12_RS01635;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AD12_RS01635;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 39638 40738 . - . ID=gene-AD12_RS01630;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AD12_RS01630;old_locus_tag=AD12_4566 NZ_JJLK01000088.1 Protein Homology CDS 39638 40738 . - 0 ID=cds-WP_000187022.1;Parent=gene-AD12_RS01630;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AD12_RS01630;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JJLK01000088.1 cmsearch riboswitch 40852 41041 . + . ID=id-NZ_JJLK01000088.1:40852..41041;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000088.1 RefSeq gene 41107 42951 . + . ID=gene-AD12_RS01625;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AD12_RS01625;old_locus_tag=AD12_4567 NZ_JJLK01000088.1 Protein Homology CDS 41107 42951 . + 0 ID=cds-WP_000591355.1;Parent=gene-AD12_RS01625;Dbxref=GenBank:WP_000591355.1;Name=WP_000591355.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AD12_RS01625;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591355.1;transl_table=11 NZ_JJLK01000088.1 RefSeq gene 42896 43753 . + . ID=gene-AD12_RS01620;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AD12_RS01620;old_locus_tag=AD12_4568 NZ_JJLK01000088.1 Protein Homology CDS 42896 43753 . + 0 ID=cds-WP_000201827.1;Parent=gene-AD12_RS01620;Dbxref=GenBank:WP_000201827.1;Name=WP_000201827.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=AD12_RS01620;product=glutamate racemase;protein_id=WP_000201827.1;transl_table=11 ##sequence-region NZ_JJLK01000089.1 1 2033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000089.1 RefSeq region 1 2033 . + . ID=NZ_JJLK01000089.1:1..2033;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000089.1 RefSeq gene 1 213 . + . ID=gene-AD12_RS0125430;Name=AD12_RS0125430;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD12_RS0125430;partial=true;start_range=.,1 NZ_JJLK01000089.1 cmsearch rRNA 1 213 . + . ID=rna-AD12_RS0125430;Parent=gene-AD12_RS0125430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125430;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000089.1 cmsearch exon 1 213 . + . ID=exon-AD12_RS0125430-1;Parent=rna-AD12_RS0125430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS0125430;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLK01000089.1 RefSeq gene 309 424 . + . ID=gene-AD12_RS01615;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS01615;old_locus_tag=AD12_4569 NZ_JJLK01000089.1 cmsearch rRNA 309 424 . + . ID=rna-AD12_RS01615;Parent=gene-AD12_RS01615;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01615;product=5S ribosomal RNA NZ_JJLK01000089.1 cmsearch exon 309 424 . + . ID=exon-AD12_RS01615-1;Parent=rna-AD12_RS01615;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01615;product=5S ribosomal RNA NZ_JJLK01000089.1 RefSeq gene 439 514 . + . ID=gene-AD12_RS01610;Name=AD12_RS01610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS01610;old_locus_tag=AD12_4570 NZ_JJLK01000089.1 tRNAscan-SE tRNA 439 514 . + . ID=rna-AD12_RS01610;Parent=gene-AD12_RS01610;anticodon=(pos:472..474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS01610;product=tRNA-Thr NZ_JJLK01000089.1 tRNAscan-SE exon 439 514 . + . ID=exon-AD12_RS01610-1;Parent=rna-AD12_RS01610;anticodon=(pos:472..474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS01610;product=tRNA-Thr NZ_JJLK01000089.1 RefSeq gene 554 669 . + . ID=gene-AD12_RS01605;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS01605;old_locus_tag=AD12_4571 NZ_JJLK01000089.1 cmsearch rRNA 554 669 . + . ID=rna-AD12_RS01605;Parent=gene-AD12_RS01605;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01605;product=5S ribosomal RNA NZ_JJLK01000089.1 cmsearch exon 554 669 . + . ID=exon-AD12_RS01605-1;Parent=rna-AD12_RS01605;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01605;product=5S ribosomal RNA NZ_JJLK01000089.1 RefSeq gene 995 2033 . + . ID=gene-AD12_RS01600;Name=kgtP;end_range=2033,.;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD12_RS01600;old_locus_tag=AD12_4572;partial=true NZ_JJLK01000089.1 Protein Homology CDS 995 2033 . + 0 ID=cds-WP_032286794.1;Parent=gene-AD12_RS01600;Dbxref=GenBank:WP_032286794.1;Name=WP_032286794.1;end_range=2033,.;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD12_RS01600;partial=true;product=alpha-ketoglutarate permease;protein_id=WP_032286794.1;transl_table=11 ##sequence-region NZ_JJLK01000090.1 1 334770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000090.1 RefSeq region 1 334770 . + . ID=NZ_JJLK01000090.1:1..334770;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000090.1 RefSeq gene 74 189 . + . ID=gene-AD12_RS01595;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD12_RS01595;old_locus_tag=AD12_4574 NZ_JJLK01000090.1 cmsearch rRNA 74 189 . + . ID=rna-AD12_RS01595;Parent=gene-AD12_RS01595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01595;product=5S ribosomal RNA NZ_JJLK01000090.1 cmsearch exon 74 189 . + . ID=exon-AD12_RS01595-1;Parent=rna-AD12_RS01595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD12_RS01595;product=5S ribosomal RNA NZ_JJLK01000090.1 RefSeq gene 266 649 . + . ID=gene-AD12_RS01590;Name=yjaA;gbkey=Gene;gene=yjaA;gene_biotype=protein_coding;locus_tag=AD12_RS01590;old_locus_tag=AD12_4575 NZ_JJLK01000090.1 Protein Homology CDS 266 649 . + 0 ID=cds-WP_001347268.1;Parent=gene-AD12_RS01590;Dbxref=GenBank:WP_001347268.1;Name=WP_001347268.1;gbkey=CDS;gene=yjaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AD12_RS01590;product=YjaA family stress response protein;protein_id=WP_001347268.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 712 1155 . - . ID=gene-AD12_RS0125440;Name=yjaB;gbkey=Gene;gene=yjaB;gene_biotype=protein_coding;locus_tag=AD12_RS0125440 NZ_JJLK01000090.1 Protein Homology CDS 712 1155 . - 0 ID=cds-WP_000237008.1;Parent=gene-AD12_RS0125440;Dbxref=GenBank:WP_000237008.1;Name=WP_000237008.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yjaB;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AD12_RS0125440;product=acetyltransferase;protein_id=WP_000237008.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 1312 2241 . + . ID=gene-AD12_RS01585;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AD12_RS01585;old_locus_tag=AD12_4577 NZ_JJLK01000090.1 Protein Homology CDS 1312 2241 . + 0 ID=cds-WP_001122789.1;Parent=gene-AD12_RS01585;Dbxref=GenBank:WP_001122789.1;Name=WP_001122789.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AD12_RS01585;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122789.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 2510 4111 . + . ID=gene-AD12_RS01580;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AD12_RS01580;old_locus_tag=AD12_4578 NZ_JJLK01000090.1 Protein Homology CDS 2510 4111 . + 0 ID=cds-WP_001392947.1;Parent=gene-AD12_RS01580;Dbxref=GenBank:WP_001392947.1;Name=WP_001392947.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312959.1;locus_tag=AD12_RS01580;product=malate synthase A;protein_id=WP_001392947.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 4141 5445 . + . ID=gene-AD12_RS01575;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AD12_RS01575;old_locus_tag=AD12_4579 NZ_JJLK01000090.1 Protein Homology CDS 4141 5445 . + 0 ID=cds-WP_000857856.1;Parent=gene-AD12_RS01575;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AD12_RS01575;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 5530 7266 . + . ID=gene-AD12_RS01570;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AD12_RS01570;old_locus_tag=AD12_4580 NZ_JJLK01000090.1 Protein Homology CDS 5530 7266 . + 0 ID=cds-WP_032286797.1;Parent=gene-AD12_RS01570;Dbxref=GenBank:WP_032286797.1;Name=WP_032286797.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AD12_RS01570;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032286797.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 7235 8809 . - . ID=gene-AD12_RS01565;Name=AD12_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01565;old_locus_tag=AD12_4581 NZ_JJLK01000090.1 Protein Homology CDS 7235 8809 . - 0 ID=cds-WP_032286798.1;Parent=gene-AD12_RS01565;Dbxref=GenBank:WP_032286798.1;Name=WP_032286798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AD12_RS01565;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_032286798.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 9126 9950 . - . ID=gene-AD12_RS01560;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AD12_RS01560;old_locus_tag=AD12_4582 NZ_JJLK01000090.1 Protein Homology CDS 9126 9950 . - 0 ID=cds-WP_001385054.1;Parent=gene-AD12_RS01560;Dbxref=GenBank:WP_001385054.1;Name=WP_001385054.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AD12_RS01560;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_001385054.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 10150 13833 . + . ID=gene-AD12_RS01555;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AD12_RS01555;old_locus_tag=AD12_4583 NZ_JJLK01000090.1 Protein Homology CDS 10150 13833 . + 0 ID=cds-WP_000096053.1;Parent=gene-AD12_RS01555;Dbxref=GenBank:WP_000096053.1;Name=WP_000096053.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=AD12_RS01555;product=methionine synthase;protein_id=WP_000096053.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 14053 15684 . + . ID=gene-AD12_RS01550;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AD12_RS01550;old_locus_tag=AD12_4584 NZ_JJLK01000090.1 Protein Homology CDS 14053 15684 . + 0 ID=cds-WP_000956830.1;Parent=gene-AD12_RS01550;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AD12_RS01550;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 15775 16464 . - . ID=gene-AD12_RS01545;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AD12_RS01545;old_locus_tag=AD12_4585 NZ_JJLK01000090.1 Protein Homology CDS 15775 16464 . - 0 ID=cds-WP_000421763.1;Parent=gene-AD12_RS01545;Dbxref=GenBank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AD12_RS01545;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 16847 18076 . - . ID=gene-AD12_RS01540;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=AD12_RS01540;old_locus_tag=AD12_4587 NZ_JJLK01000090.1 Protein Homology CDS 16847 18076 . - 0 ID=cds-WP_000858545.1;Parent=gene-AD12_RS01540;Dbxref=GenBank:WP_000858545.1;Name=WP_000858545.1;gbkey=CDS;gene=sorE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312968.1;locus_tag=AD12_RS01540;product=L-sorbose 1-phosphate reductase;protein_id=WP_000858545.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 18128 18952 . - . ID=gene-AD12_RS01535;Name=AD12_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01535;old_locus_tag=AD12_4588 NZ_JJLK01000090.1 Protein Homology CDS 18128 18952 . - 0 ID=cds-WP_000437902.1;Parent=gene-AD12_RS01535;Dbxref=GenBank:WP_000437902.1;Name=WP_000437902.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224537.1;locus_tag=AD12_RS01535;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000437902.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 18963 19762 . - . ID=gene-AD12_RS0125450;Name=AD12_RS0125450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS0125450;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 18963 19762 . - 0 ID=cds-AD12_RS0125450;Parent=gene-AD12_RS0125450;Note=frameshifted;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224538.1;locus_tag=AD12_RS0125450;product=PTS mannose/fructose/sorbose transporter subunit IIC;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 19828 20322 . - . ID=gene-AD12_RS01530;Name=AD12_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01530;old_locus_tag=AD12_4591 NZ_JJLK01000090.1 Protein Homology CDS 19828 20322 . - 0 ID=cds-WP_032286799.1;Parent=gene-AD12_RS01530;Dbxref=GenBank:WP_032286799.1;Name=WP_032286799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709809.1;locus_tag=AD12_RS01530;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_032286799.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 20322 20729 . - . ID=gene-AD12_RS01525;Name=AD12_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01525;old_locus_tag=AD12_4592 NZ_JJLK01000090.1 Protein Homology CDS 20322 20729 . - 0 ID=cds-WP_000245645.1;Parent=gene-AD12_RS01525;Dbxref=GenBank:WP_000245645.1;Name=WP_000245645.1;Ontology_term=GO:0008643,GO:0016773,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313029.1;locus_tag=AD12_RS01525;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_000245645.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 20739 21545 . - . ID=gene-AD12_RS01520;Name=AD12_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01520;old_locus_tag=AD12_4593 NZ_JJLK01000090.1 Protein Homology CDS 20739 21545 . - 0 ID=cds-WP_001195424.1;Parent=gene-AD12_RS01520;Dbxref=GenBank:WP_001195424.1;Name=WP_001195424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313030.1;locus_tag=AD12_RS01520;product=SDR family oxidoreductase;protein_id=WP_001195424.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 21615 22562 . - . ID=gene-AD12_RS01515;Name=AD12_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01515;old_locus_tag=AD12_4594 NZ_JJLK01000090.1 Protein Homology CDS 21615 22562 . - 0 ID=cds-WP_001341740.1;Parent=gene-AD12_RS01515;Dbxref=GenBank:WP_001341740.1;Name=WP_001341740.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709812.2;locus_tag=AD12_RS01515;product=sugar-binding transcriptional regulator;protein_id=WP_001341740.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 22910 23782 . + . ID=gene-AD12_RS01510;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AD12_RS01510;old_locus_tag=AD12_4595 NZ_JJLK01000090.1 Protein Homology CDS 22910 23782 . + 0 ID=cds-WP_000936350.1;Parent=gene-AD12_RS01510;Dbxref=GenBank:WP_000936350.1;Name=WP_000936350.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709813.1;locus_tag=AD12_RS01510;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936350.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 23783 24055 . - . ID=gene-AD12_RS01505;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AD12_RS01505;old_locus_tag=AD12_4596 NZ_JJLK01000090.1 Protein Homology CDS 23783 24055 . - 0 ID=cds-WP_001207638.1;Parent=gene-AD12_RS01505;Dbxref=GenBank:WP_001207638.1;Name=WP_001207638.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313033.1;locus_tag=AD12_RS01505;product=DUF3811 domain-containing protein;protein_id=WP_001207638.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 24585 25712 . + . ID=gene-AD12_RS01500;Name=AD12_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01500;old_locus_tag=AD12_4598 NZ_JJLK01000090.1 Protein Homology CDS 24585 25712 . + 0 ID=cds-WP_000592033.1;Parent=gene-AD12_RS01500;Dbxref=GenBank:WP_000592033.1;Name=WP_000592033.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592028.1;locus_tag=AD12_RS01500;product=slipin family protein;protein_id=WP_000592033.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 25718 26509 . + . ID=gene-AD12_RS01495;Name=AD12_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01495;old_locus_tag=AD12_4599 NZ_JJLK01000090.1 Protein Homology CDS 25718 26509 . + 0 ID=cds-WP_001130533.1;Parent=gene-AD12_RS01495;Dbxref=GenBank:WP_001130533.1;Name=WP_001130533.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130549.1;locus_tag=AD12_RS01495;product=nucleotidyltransferase domain-containing protein;protein_id=WP_001130533.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 26545 27471 . - . ID=gene-AD12_RS01490;Name=AD12_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01490;old_locus_tag=AD12_4600 NZ_JJLK01000090.1 Protein Homology CDS 26545 27471 . - 0 ID=cds-WP_000212687.1;Parent=gene-AD12_RS01490;Dbxref=GenBank:WP_000212687.1;Name=WP_000212687.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666873.1;locus_tag=AD12_RS01490;product=zeta toxin family protein;protein_id=WP_000212687.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 27616 28965 . - . ID=gene-AD12_RS01485;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD12_RS01485;old_locus_tag=AD12_4601 NZ_JJLK01000090.1 Protein Homology CDS 27616 28965 . - 0 ID=cds-WP_001290329.1;Parent=gene-AD12_RS01485;Dbxref=GenBank:WP_001290329.1;Name=WP_001290329.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=AD12_RS01485;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290329.1;transl_table=11 NZ_JJLK01000090.1 cmsearch riboswitch 29057 29253 . - . ID=id-NZ_JJLK01000090.1:29057..29253;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLK01000090.1 RefSeq gene 29490 31139 . + . ID=gene-AD12_RS01480;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AD12_RS01480;old_locus_tag=AD12_4602 NZ_JJLK01000090.1 Protein Homology CDS 29490 31139 . + 0 ID=cds-WP_000789985.1;Parent=gene-AD12_RS01480;Dbxref=GenBank:WP_000789985.1;Name=WP_000789985.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681912.1;locus_tag=AD12_RS01480;product=glucose-6-phosphate isomerase;protein_id=WP_000789985.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 31494 31736 . + . ID=gene-AD12_RS01475;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AD12_RS01475;old_locus_tag=AD12_4603 NZ_JJLK01000090.1 Protein Homology CDS 31494 31736 . + 0 ID=cds-WP_000757329.1;Parent=gene-AD12_RS01475;Dbxref=GenBank:WP_000757329.1;Name=WP_000757329.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AD12_RS01475;product=exopolysaccharide production protein YjbE;protein_id=WP_000757329.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 31850 32488 . + . ID=gene-AD12_RS01470;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AD12_RS01470;old_locus_tag=AD12_4604 NZ_JJLK01000090.1 Protein Homology CDS 31850 32488 . + 0 ID=cds-WP_001296632.1;Parent=gene-AD12_RS01470;Dbxref=GenBank:WP_001296632.1;Name=WP_001296632.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AD12_RS01470;product=YjbF family lipoprotein;protein_id=WP_001296632.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 32485 33222 . + . ID=gene-AD12_RS01465;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AD12_RS01465;old_locus_tag=AD12_4605 NZ_JJLK01000090.1 Protein Homology CDS 32485 33222 . + 0 ID=cds-WP_000595534.1;Parent=gene-AD12_RS01465;Dbxref=GenBank:WP_000595534.1;Name=WP_000595534.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AD12_RS01465;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595534.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 33222 35318 . + . ID=gene-AD12_RS01460;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AD12_RS01460;old_locus_tag=AD12_4606 NZ_JJLK01000090.1 Protein Homology CDS 33222 35318 . + 0 ID=cds-WP_000745767.1;Parent=gene-AD12_RS01460;Dbxref=GenBank:WP_000745767.1;Name=WP_000745767.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AD12_RS01460;product=YjbH domain-containing protein;protein_id=WP_000745767.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 35365 35643 . - . ID=gene-AD12_RS28375;Name=AD12_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28375 NZ_JJLK01000090.1 Protein Homology CDS 35365 35643 . - 0 ID=cds-WP_001295279.1;Parent=gene-AD12_RS28375;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AD12_RS28375;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 35644 35787 . + . ID=gene-AD12_RS29160;Name=AD12_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29160;old_locus_tag=AD12_4608 NZ_JJLK01000090.1 GeneMarkS-2+ CDS 35644 35787 . + 0 ID=cds-WP_000487766.1;Parent=gene-AD12_RS29160;Dbxref=GenBank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29160;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 35913 36323 . + . ID=gene-AD12_RS01450;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AD12_RS01450;old_locus_tag=AD12_4609 NZ_JJLK01000090.1 Protein Homology CDS 35913 36323 . + 0 ID=cds-WP_000202902.1;Parent=gene-AD12_RS01450;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AD12_RS01450;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 36367 37842 . - . ID=gene-AD12_RS01445;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AD12_RS01445;old_locus_tag=AD12_4610 NZ_JJLK01000090.1 Protein Homology CDS 36367 37842 . - 0 ID=cds-WP_001097291.1;Parent=gene-AD12_RS01445;Dbxref=GenBank:WP_001097291.1;Name=WP_001097291.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AD12_RS01445;product=D-xylose transporter XylE;protein_id=WP_001097291.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 38214 39104 . - . ID=gene-AD12_RS01440;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AD12_RS01440;old_locus_tag=AD12_4611 NZ_JJLK01000090.1 Protein Homology CDS 38214 39104 . - 0 ID=cds-WP_001252058.1;Parent=gene-AD12_RS01440;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AD12_RS01440;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 39119 40663 . - . ID=gene-AD12_RS01435;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AD12_RS01435;old_locus_tag=AD12_4612 NZ_JJLK01000090.1 Protein Homology CDS 39119 40663 . - 0 ID=cds-WP_001297290.1;Parent=gene-AD12_RS01435;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AD12_RS01435;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 40817 42007 . - . ID=gene-AD12_RS01430;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AD12_RS01430;old_locus_tag=AD12_4613 NZ_JJLK01000090.1 Protein Homology CDS 40817 42007 . - 0 ID=cds-WP_000695387.1;Parent=gene-AD12_RS01430;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AD12_RS01430;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 42372 43487 . + . ID=gene-AD12_RS01425;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AD12_RS01425;old_locus_tag=AD12_4614 NZ_JJLK01000090.1 Protein Homology CDS 42372 43487 . + 0 ID=cds-WP_000179165.1;Parent=gene-AD12_RS01425;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AD12_RS01425;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 43559 44899 . + . ID=gene-AD12_RS01420;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AD12_RS01420;old_locus_tag=AD12_4615 NZ_JJLK01000090.1 Protein Homology CDS 43559 44899 . + 0 ID=cds-WP_000973658.1;Parent=gene-AD12_RS01420;Dbxref=GenBank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AD12_RS01420;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 45142 46062 . + . ID=gene-AD12_RS01415;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AD12_RS01415;old_locus_tag=AD12_4616 NZ_JJLK01000090.1 Protein Homology CDS 45142 46062 . + 0 ID=cds-WP_000783444.1;Parent=gene-AD12_RS01415;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AD12_RS01415;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 46291 47871 . + . ID=gene-AD12_RS01410;Name=AD12_RS01410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS01410;old_locus_tag=AD12_4619;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 46291 47871 . + 0 ID=cds-AD12_RS01410;Parent=gene-AD12_RS01410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=AD12_RS01410;product=SopA family protein;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 48094 48591 . + . ID=gene-AD12_RS01405;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AD12_RS01405;old_locus_tag=AD12_4620 NZ_JJLK01000090.1 Protein Homology CDS 48094 48591 . + 0 ID=cds-WP_001297295.1;Parent=gene-AD12_RS01405;Dbxref=GenBank:WP_001297295.1;Name=WP_001297295.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AD12_RS01405;product=chorismate lyase;protein_id=WP_001297295.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 48604 49476 . + . ID=gene-AD12_RS01400;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AD12_RS01400;old_locus_tag=AD12_4621 NZ_JJLK01000090.1 Protein Homology CDS 48604 49476 . + 0 ID=cds-WP_000455228.1;Parent=gene-AD12_RS01400;Dbxref=GenBank:WP_000455228.1;Name=WP_000455228.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AD12_RS01400;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455228.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 49631 52054 . - . ID=gene-AD12_RS01395;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AD12_RS01395;old_locus_tag=AD12_4622 NZ_JJLK01000090.1 Protein Homology CDS 49631 52054 . - 0 ID=cds-WP_000017354.1;Parent=gene-AD12_RS01395;Dbxref=GenBank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AD12_RS01395;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 52225 52593 . + . ID=gene-AD12_RS01390;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AD12_RS01390;old_locus_tag=AD12_4623 NZ_JJLK01000090.1 Protein Homology CDS 52225 52593 . + 0 ID=cds-WP_000002907.1;Parent=gene-AD12_RS01390;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AD12_RS01390;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 52703 53311 . + . ID=gene-AD12_RS01385;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AD12_RS01385;old_locus_tag=AD12_4624 NZ_JJLK01000090.1 Protein Homology CDS 52703 53311 . + 0 ID=cds-WP_000646078.1;Parent=gene-AD12_RS01385;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AD12_RS01385;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 53384 54709 . + . ID=gene-AD12_RS01380;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AD12_RS01380;old_locus_tag=AD12_4625 NZ_JJLK01000090.1 Protein Homology CDS 53384 54709 . + 0 ID=cds-WP_001301116.1;Parent=gene-AD12_RS01380;Dbxref=GenBank:WP_001301116.1;Name=WP_001301116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AD12_RS01380;product=MATE family efflux transporter DinF;protein_id=WP_001301116.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 54825 55034 . + . ID=gene-AD12_RS01375;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AD12_RS01375;old_locus_tag=AD12_4626 NZ_JJLK01000090.1 Protein Homology CDS 54825 55034 . + 0 ID=cds-WP_001030593.1;Parent=gene-AD12_RS01375;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AD12_RS01375;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 55076 55591 . - . ID=gene-AD12_RS01370;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AD12_RS01370;old_locus_tag=AD12_4627 NZ_JJLK01000090.1 Protein Homology CDS 55076 55591 . - 0 ID=cds-WP_001295691.1;Parent=gene-AD12_RS01370;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AD12_RS01370;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 55909 56925 . + . ID=gene-AD12_RS01365;Name=AD12_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS01365;old_locus_tag=AD12_4628 NZ_JJLK01000090.1 Protein Homology CDS 55909 56925 . + 0 ID=cds-WP_032286800.1;Parent=gene-AD12_RS01365;Dbxref=GenBank:WP_032286800.1;Name=WP_032286800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AD12_RS01365;product=DUF2713 family protein;protein_id=WP_032286800.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 57288 58325 . + . ID=gene-AD12_RS01360;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AD12_RS01360;old_locus_tag=AD12_4629 NZ_JJLK01000090.1 Protein Homology CDS 57288 58325 . + 0 ID=cds-WP_001298868.1;Parent=gene-AD12_RS01360;Dbxref=GenBank:WP_001298868.1;Name=WP_001298868.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AD12_RS01360;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001298868.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 58459 58701 . + . ID=gene-AD12_RS01355;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AD12_RS01355;old_locus_tag=AD12_4630 NZ_JJLK01000090.1 Protein Homology CDS 58459 58701 . + 0 ID=cds-WP_000891389.1;Parent=gene-AD12_RS01355;Dbxref=GenBank:WP_000891389.1;Name=WP_000891389.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AD12_RS01355;product=envelope stress response protein PspG;protein_id=WP_000891389.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 58867 59850 . - . ID=gene-AD12_RS01350;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AD12_RS01350;old_locus_tag=AD12_4631 NZ_JJLK01000090.1 Protein Homology CDS 58867 59850 . - 0 ID=cds-WP_000235522.1;Parent=gene-AD12_RS01350;Dbxref=GenBank:WP_000235522.1;Name=WP_000235522.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AD12_RS01350;product=quinone oxidoreductase;protein_id=WP_000235522.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 59933 61348 . + . ID=gene-AD12_RS01345;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AD12_RS01345;old_locus_tag=AD12_4632 NZ_JJLK01000090.1 Protein Homology CDS 59933 61348 . + 0 ID=cds-WP_000918363.1;Parent=gene-AD12_RS01345;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AD12_RS01345;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 61401 62480 . + . ID=gene-AD12_RS01340;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AD12_RS01340;old_locus_tag=AD12_4633 NZ_JJLK01000090.1 Protein Homology CDS 61401 62480 . + 0 ID=cds-WP_001147328.1;Parent=gene-AD12_RS01340;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AD12_RS01340;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 62733 63926 . + . ID=gene-AD12_RS01335;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AD12_RS01335;old_locus_tag=AD12_4635 NZ_JJLK01000090.1 Protein Homology CDS 62733 63926 . + 0 ID=cds-WP_000486996.1;Parent=gene-AD12_RS01335;Dbxref=GenBank:WP_000486996.1;Name=WP_000486996.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AD12_RS01335;product=aromatic amino acid transaminase;protein_id=WP_000486996.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 64148 64399 . - . ID=gene-AD12_RS29625;Name=AD12_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29625 NZ_JJLK01000090.1 GeneMarkS-2+ CDS 64148 64399 . - 0 ID=cds-WP_000275035.1;Parent=gene-AD12_RS29625;Dbxref=GenBank:WP_000275035.1;Name=WP_000275035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS29625;product=hypothetical protein;protein_id=WP_000275035.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 64429 64651 . - . ID=gene-AD12_RS29630;Name=AD12_RS29630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29630;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 64429 64651 . - 0 ID=cds-AD12_RS29630;Parent=gene-AD12_RS29630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AD12_RS29630;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 65053 65766 . + . ID=gene-AD12_RS01325;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AD12_RS01325;old_locus_tag=AD12_4638 NZ_JJLK01000090.1 Protein Homology CDS 65053 65766 . + 0 ID=cds-WP_032221483.1;Parent=gene-AD12_RS01325;Dbxref=GenBank:WP_032221483.1;Name=WP_032221483.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AD12_RS01325;product=acid phosphatase AphA;protein_id=WP_032221483.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 65877 66293 . + . ID=gene-AD12_RS01320;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AD12_RS01320;old_locus_tag=AD12_4639 NZ_JJLK01000090.1 Protein Homology CDS 65877 66293 . + 0 ID=cds-WP_000270372.1;Parent=gene-AD12_RS01320;Dbxref=GenBank:WP_000270372.1;Name=WP_000270372.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AD12_RS01320;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270372.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 66297 66653 . + . ID=gene-AD12_RS01315;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AD12_RS01315;old_locus_tag=AD12_4640 NZ_JJLK01000090.1 Protein Homology CDS 66297 66653 . + 0 ID=cds-WP_000155657.1;Parent=gene-AD12_RS01315;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AD12_RS01315;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 66688 69510 . - . ID=gene-AD12_RS01310;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AD12_RS01310;old_locus_tag=AD12_4641 NZ_JJLK01000090.1 Protein Homology CDS 66688 69510 . - 0 ID=cds-WP_000357740.1;Parent=gene-AD12_RS01310;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AD12_RS01310;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 69764 70300 . + . ID=gene-AD12_RS01305;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AD12_RS01305;old_locus_tag=AD12_4642 NZ_JJLK01000090.1 Protein Homology CDS 69764 70300 . + 0 ID=cds-WP_000168305.1;Parent=gene-AD12_RS01305;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AD12_RS01305;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 70399 70680 . - . ID=gene-AD12_RS01300;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AD12_RS01300;old_locus_tag=AD12_4643 NZ_JJLK01000090.1 Protein Homology CDS 70399 70680 . - 0 ID=cds-WP_001295689.1;Parent=gene-AD12_RS01300;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AD12_RS01300;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 71113 72699 . + . ID=gene-AD12_RS01295;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AD12_RS01295;old_locus_tag=AD12_4644 NZ_JJLK01000090.1 Protein Homology CDS 71113 72699 . + 0 ID=cds-WP_000019531.1;Parent=gene-AD12_RS01295;Dbxref=GenBank:WP_000019531.1;Name=WP_000019531.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AD12_RS01295;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019531.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 72702 73025 . - . ID=gene-AD12_RS01290;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AD12_RS01290;old_locus_tag=AD12_4645 NZ_JJLK01000090.1 Protein Homology CDS 72702 73025 . - 0 ID=cds-WP_000019358.1;Parent=gene-AD12_RS01290;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AD12_RS01290;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 73111 73575 . + . ID=gene-AD12_RS01285;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AD12_RS01285;old_locus_tag=AD12_4646 NZ_JJLK01000090.1 Protein Homology CDS 73111 73575 . + 0 ID=cds-WP_000412428.1;Parent=gene-AD12_RS01285;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AD12_RS01285;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 74121 75470 . + . ID=gene-AD12_RS01280;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AD12_RS01280;old_locus_tag=AD12_4649 NZ_JJLK01000090.1 Protein Homology CDS 74121 75470 . + 0 ID=cds-WP_000106882.1;Parent=gene-AD12_RS01280;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AD12_RS01280;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 75621 77270 . + . ID=gene-AD12_RS01275;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AD12_RS01275;old_locus_tag=AD12_4650 NZ_JJLK01000090.1 Protein Homology CDS 75621 77270 . + 0 ID=cds-WP_000402207.1;Parent=gene-AD12_RS01275;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AD12_RS01275;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 77424 78716 . - . ID=gene-AD12_RS01270;Name=yjcF;gbkey=Gene;gene=yjcF;gene_biotype=protein_coding;locus_tag=AD12_RS01270;old_locus_tag=AD12_4651 NZ_JJLK01000090.1 Protein Homology CDS 77424 78716 . - 0 ID=cds-WP_001270133.1;Parent=gene-AD12_RS01270;Dbxref=GenBank:WP_001270133.1;Name=WP_001270133.1;gbkey=CDS;gene=yjcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709843.1;locus_tag=AD12_RS01270;product=pentapeptide repeat-containing protein;protein_id=WP_001270133.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 78894 80543 . - . ID=gene-AD12_RS01265;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AD12_RS01265;old_locus_tag=AD12_4652 NZ_JJLK01000090.1 Protein Homology CDS 78894 80543 . - 0 ID=cds-WP_000832572.1;Parent=gene-AD12_RS01265;Dbxref=GenBank:WP_000832572.1;Name=WP_000832572.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AD12_RS01265;product=cation/acetate symporter ActP;protein_id=WP_000832572.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 80540 80854 . - . ID=gene-AD12_RS01260;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AD12_RS01260;old_locus_tag=AD12_4653 NZ_JJLK01000090.1 Protein Homology CDS 80540 80854 . - 0 ID=cds-WP_001014565.1;Parent=gene-AD12_RS01260;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AD12_RS01260;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 81055 83013 . - . ID=gene-AD12_RS01255;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AD12_RS01255;old_locus_tag=AD12_4654 NZ_JJLK01000090.1 Protein Homology CDS 81055 83013 . - 0 ID=cds-WP_000078239.1;Parent=gene-AD12_RS01255;Dbxref=GenBank:WP_000078239.1;Name=WP_000078239.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AD12_RS01255;product=acetate--CoA ligase;protein_id=WP_000078239.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 83405 84841 . + . ID=gene-AD12_RS01250;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AD12_RS01250;old_locus_tag=AD12_4655 NZ_JJLK01000090.1 Protein Homology CDS 83405 84841 . + 0 ID=cds-WP_000196875.1;Parent=gene-AD12_RS01250;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AD12_RS01250;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 84886 85452 . + . ID=gene-AD12_RS01245;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AD12_RS01245;old_locus_tag=AD12_4656 NZ_JJLK01000090.1 Protein Homology CDS 84886 85452 . + 0 ID=cds-WP_001295391.1;Parent=gene-AD12_RS01245;Dbxref=GenBank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AD12_RS01245;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 85449 86120 . + . ID=gene-AD12_RS01240;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AD12_RS01240;old_locus_tag=AD12_4657 NZ_JJLK01000090.1 Protein Homology CDS 85449 86120 . + 0 ID=cds-WP_000220281.1;Parent=gene-AD12_RS01240;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AD12_RS01240;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 86117 87073 . + . ID=gene-AD12_RS01235;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AD12_RS01235;old_locus_tag=AD12_4658 NZ_JJLK01000090.1 Protein Homology CDS 86117 87073 . + 0 ID=cds-WP_000195173.1;Parent=gene-AD12_RS01235;Dbxref=GenBank:WP_000195173.1;Name=WP_000195173.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AD12_RS01235;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195173.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 87093 88811 . + . ID=gene-AD12_RS01230;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AD12_RS01230;old_locus_tag=AD12_4659 NZ_JJLK01000090.1 Protein Homology CDS 87093 88811 . + 0 ID=cds-WP_071529413.1;Parent=gene-AD12_RS01230;Dbxref=GenBank:WP_071529413.1;Name=WP_071529413.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AD12_RS01230;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071529413.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 88804 89187 . + . ID=gene-AD12_RS01225;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AD12_RS01225;old_locus_tag=AD12_4660 NZ_JJLK01000090.1 Protein Homology CDS 88804 89187 . + 0 ID=cds-WP_001032546.1;Parent=gene-AD12_RS01225;Dbxref=GenBank:WP_001032546.1;Name=WP_001032546.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AD12_RS01225;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032546.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 89184 89780 . + . ID=gene-AD12_RS01220;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AD12_RS01220;old_locus_tag=AD12_4661 NZ_JJLK01000090.1 Protein Homology CDS 89184 89780 . + 0 ID=cds-WP_000812889.1;Parent=gene-AD12_RS01220;Dbxref=GenBank:WP_000812889.1;Name=WP_000812889.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AD12_RS01220;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812889.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 90122 91435 . + . ID=gene-AD12_RS01215;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AD12_RS01215;old_locus_tag=AD12_4663 NZ_JJLK01000090.1 Protein Homology CDS 90122 91435 . + 0 ID=cds-WP_000835799.1;Parent=gene-AD12_RS01215;Dbxref=GenBank:WP_000835799.1;Name=WP_000835799.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AD12_RS01215;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000835799.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 91513 92202 . - . ID=gene-AD12_RS01210;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AD12_RS01210;old_locus_tag=AD12_4664 NZ_JJLK01000090.1 Protein Homology CDS 91513 92202 . - 0 ID=cds-WP_000719886.1;Parent=gene-AD12_RS01210;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AD12_RS01210;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 92296 94443 . - . ID=gene-AD12_RS01205;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AD12_RS01205;old_locus_tag=AD12_4665 NZ_JJLK01000090.1 Protein Homology CDS 92296 94443 . - 0 ID=cds-WP_001300547.1;Parent=gene-AD12_RS01205;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AD12_RS01205;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(94024..94026)%2Caa:Sec);transl_table=11 NZ_JJLK01000090.1 RefSeq gene 94641 96107 . - . ID=gene-AD12_RS01195;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AD12_RS01195;old_locus_tag=AD12_4668 NZ_JJLK01000090.1 Protein Homology CDS 94641 96107 . - 0 ID=cds-WP_000610574.1;Parent=gene-AD12_RS01195;Dbxref=GenBank:WP_000610574.1;Name=WP_000610574.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=AD12_RS01195;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610574.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 96104 98155 . - . ID=gene-AD12_RS01190;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AD12_RS01190;old_locus_tag=AD12_4669 NZ_JJLK01000090.1 Protein Homology CDS 96104 98155 . - 0 ID=cds-WP_032286801.1;Parent=gene-AD12_RS01190;Dbxref=GenBank:WP_032286801.1;Name=WP_032286801.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AD12_RS01190;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_032286801.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 98155 99186 . - . ID=gene-AD12_RS01185;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AD12_RS01185;old_locus_tag=AD12_4670 NZ_JJLK01000090.1 Protein Homology CDS 98155 99186 . - 0 ID=cds-WP_032286802.1;Parent=gene-AD12_RS01185;Dbxref=GenBank:WP_032286802.1;Name=WP_032286802.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AD12_RS01185;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_032286802.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 99205 99480 . - . ID=gene-AD12_RS01180;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AD12_RS01180;old_locus_tag=AD12_4671 NZ_JJLK01000090.1 Protein Homology CDS 99205 99480 . - 0 ID=cds-WP_001297587.1;Parent=gene-AD12_RS01180;Dbxref=GenBank:WP_001297587.1;Name=WP_001297587.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AD12_RS01180;product=YtcA family lipoprotein;protein_id=WP_001297587.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 99689 101674 . - . ID=gene-AD12_RS01175;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AD12_RS01175;old_locus_tag=AD12_4673 NZ_JJLK01000090.1 Protein Homology CDS 99689 101674 . - 0 ID=cds-WP_032286803.1;Parent=gene-AD12_RS01175;Dbxref=GenBank:WP_032286803.1;Name=WP_032286803.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AD12_RS01175;product=alkyl sulfatase YjcS;protein_id=WP_032286803.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 101947 102876 . - . ID=gene-AD12_RS01170;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=AD12_RS01170;old_locus_tag=AD12_4675 NZ_JJLK01000090.1 Protein Homology CDS 101947 102876 . - 0 ID=cds-WP_032178137.1;Parent=gene-AD12_RS01170;Dbxref=GenBank:WP_032178137.1;Name=WP_032178137.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AD12_RS01170;product=allose kinase;protein_id=WP_032178137.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 102860 103555 . - . ID=gene-AD12_RS01165;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=AD12_RS01165;old_locus_tag=AD12_4676 NZ_JJLK01000090.1 Protein Homology CDS 102860 103555 . - 0 ID=cds-WP_001311314.1;Parent=gene-AD12_RS01165;Dbxref=GenBank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AD12_RS01165;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 103566 104546 . - . ID=gene-AD12_RS01160;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AD12_RS01160;old_locus_tag=AD12_4677 NZ_JJLK01000090.1 Protein Homology CDS 103566 104546 . - 0 ID=cds-WP_000507106.1;Parent=gene-AD12_RS01160;Dbxref=GenBank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AD12_RS01160;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 104525 106057 . - . ID=gene-AD12_RS01155;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=AD12_RS01155;old_locus_tag=AD12_4678 NZ_JJLK01000090.1 Protein Homology CDS 104525 106057 . - 0 ID=cds-WP_000235260.1;Parent=gene-AD12_RS01155;Dbxref=GenBank:WP_000235260.1;Name=WP_000235260.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AD12_RS01155;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_000235260.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 106184 107119 . - . ID=gene-AD12_RS01150;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AD12_RS01150;old_locus_tag=AD12_4679 NZ_JJLK01000090.1 Protein Homology CDS 106184 107119 . - 0 ID=cds-WP_001046194.1;Parent=gene-AD12_RS01150;Dbxref=GenBank:WP_001046194.1;Name=WP_001046194.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AD12_RS01150;product=D-allose transporter substrate-binding protein;protein_id=WP_001046194.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 107178 108068 . - . ID=gene-AD12_RS01145;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AD12_RS01145;old_locus_tag=AD12_4680 NZ_JJLK01000090.1 Protein Homology CDS 107178 108068 . - 0 ID=cds-WP_032286804.1;Parent=gene-AD12_RS01145;Dbxref=GenBank:WP_032286804.1;Name=WP_032286804.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AD12_RS01145;product=MurR/RpiR family transcriptional regulator;protein_id=WP_032286804.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 108428 108877 . + . ID=gene-AD12_RS01140;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AD12_RS01140;old_locus_tag=AD12_4681 NZ_JJLK01000090.1 Protein Homology CDS 108428 108877 . + 0 ID=cds-WP_000716794.1;Parent=gene-AD12_RS01140;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AD12_RS01140;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 108946 109275 . + . ID=gene-AD12_RS01135;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AD12_RS01135;old_locus_tag=AD12_4682 NZ_JJLK01000090.1 Protein Homology CDS 108946 109275 . + 0 ID=cds-WP_000819746.1;Parent=gene-AD12_RS01135;Dbxref=GenBank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AD12_RS01135;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 109422 110180 . - . ID=gene-AD12_RS01130;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AD12_RS01130;old_locus_tag=AD12_4683 NZ_JJLK01000090.1 Protein Homology CDS 109422 110180 . - 0 ID=cds-WP_000059928.1;Parent=gene-AD12_RS01130;Dbxref=GenBank:WP_000059928.1;Name=WP_000059928.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AD12_RS01130;product=phosphonate metabolism protein PhnP;protein_id=WP_000059928.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 110182 110616 . - . ID=gene-AD12_RS01125;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AD12_RS01125;old_locus_tag=AD12_4684 NZ_JJLK01000090.1 Protein Homology CDS 110182 110616 . - 0 ID=cds-WP_001110490.1;Parent=gene-AD12_RS01125;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AD12_RS01125;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 110603 111160 . - . ID=gene-AD12_RS01120;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AD12_RS01120;old_locus_tag=AD12_4685 NZ_JJLK01000090.1 Protein Homology CDS 110603 111160 . - 0 ID=cds-WP_000971891.1;Parent=gene-AD12_RS01120;Dbxref=GenBank:WP_000971891.1;Name=WP_000971891.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=AD12_RS01120;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971891.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 111160 112296 . - . ID=gene-AD12_RS01115;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AD12_RS01115;old_locus_tag=AD12_4686 NZ_JJLK01000090.1 Protein Homology CDS 111160 112296 . - 0 ID=cds-WP_000586282.1;Parent=gene-AD12_RS01115;Dbxref=GenBank:WP_000586282.1;Name=WP_000586282.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AD12_RS01115;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586282.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 112293 112973 . - . ID=gene-AD12_RS01110;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AD12_RS01110;old_locus_tag=AD12_4687 NZ_JJLK01000090.1 Protein Homology CDS 112293 112973 . - 0 ID=cds-WP_000611419.1;Parent=gene-AD12_RS01110;Dbxref=GenBank:WP_000611419.1;Name=WP_000611419.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313106.1;locus_tag=AD12_RS01110;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611419.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 113150 113908 . - . ID=gene-AD12_RS01105;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AD12_RS01105;old_locus_tag=AD12_4688 NZ_JJLK01000090.1 Protein Homology CDS 113150 113908 . - 0 ID=cds-WP_001075526.1;Parent=gene-AD12_RS01105;Dbxref=GenBank:WP_001075526.1;Name=WP_001075526.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=AD12_RS01105;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075526.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 113905 114750 . - . ID=gene-AD12_RS01100;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AD12_RS01100;old_locus_tag=AD12_4689 NZ_JJLK01000090.1 Protein Homology CDS 113905 114750 . - 0 ID=cds-WP_000002283.1;Parent=gene-AD12_RS01100;Dbxref=GenBank:WP_000002283.1;Name=WP_000002283.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AD12_RS01100;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002283.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 114743 115807 . - . ID=gene-AD12_RS01095;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AD12_RS01095;old_locus_tag=AD12_4690 NZ_JJLK01000090.1 Protein Homology CDS 114743 115807 . - 0 ID=cds-WP_001325988.1;Parent=gene-AD12_RS01095;Dbxref=GenBank:WP_001325988.1;Name=WP_001325988.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313109.1;locus_tag=AD12_RS01095;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001325988.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 115807 116391 . - . ID=gene-AD12_RS01090;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AD12_RS01090;old_locus_tag=AD12_4691 NZ_JJLK01000090.1 Protein Homology CDS 115807 116391 . - 0 ID=cds-WP_000171603.1;Parent=gene-AD12_RS01090;Dbxref=GenBank:WP_000171603.1;Name=WP_000171603.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=AD12_RS01090;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171603.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 116388 116840 . - . ID=gene-AD12_RS01085;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AD12_RS01085;old_locus_tag=AD12_4692 NZ_JJLK01000090.1 Protein Homology CDS 116388 116840 . - 0 ID=cds-WP_000542768.1;Parent=gene-AD12_RS01085;Dbxref=GenBank:WP_000542768.1;Name=WP_000542768.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AD12_RS01085;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542768.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 116841 117566 . - . ID=gene-AD12_RS01080;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AD12_RS01080;old_locus_tag=AD12_4693 NZ_JJLK01000090.1 Protein Homology CDS 116841 117566 . - 0 ID=cds-WP_001295387.1;Parent=gene-AD12_RS01080;Dbxref=GenBank:WP_001295387.1;Name=WP_001295387.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AD12_RS01080;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001295387.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 117587 118366 . - . ID=gene-AD12_RS01075;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AD12_RS01075;old_locus_tag=AD12_4694 NZ_JJLK01000090.1 Protein Homology CDS 117587 118366 . - 0 ID=cds-WP_001193509.1;Parent=gene-AD12_RS01075;Dbxref=GenBank:WP_001193509.1;Name=WP_001193509.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AD12_RS01075;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001193509.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 118428 119444 . - . ID=gene-AD12_RS01070;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AD12_RS01070;old_locus_tag=AD12_4695 NZ_JJLK01000090.1 Protein Homology CDS 118428 119444 . - 0 ID=cds-WP_000991990.1;Parent=gene-AD12_RS01070;Dbxref=GenBank:WP_000991990.1;Name=WP_000991990.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AD12_RS01070;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000991990.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 119469 120257 . - . ID=gene-AD12_RS01065;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AD12_RS01065;old_locus_tag=AD12_4696 NZ_JJLK01000090.1 Protein Homology CDS 119469 120257 . - 0 ID=cds-WP_001193397.1;Parent=gene-AD12_RS01065;Dbxref=GenBank:WP_001193397.1;Name=WP_001193397.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709835.2;locus_tag=AD12_RS01065;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193397.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 120390 120833 . - . ID=gene-AD12_RS01060;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AD12_RS01060;old_locus_tag=AD12_4698 NZ_JJLK01000090.1 Protein Homology CDS 120390 120833 . - 0 ID=cds-WP_001131322.1;Parent=gene-AD12_RS01060;Dbxref=GenBank:WP_001131322.1;Name=WP_001131322.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AD12_RS01060;product=VOC family metalloprotein YjdN;protein_id=WP_001131322.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 120993 121328 . - . ID=gene-AD12_RS01055;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AD12_RS01055;old_locus_tag=AD12_4699 NZ_JJLK01000090.1 Protein Homology CDS 120993 121328 . - 0 ID=cds-WP_001300891.1;Parent=gene-AD12_RS01055;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AD12_RS01055;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 121730 123958 . + . ID=gene-AD12_RS01050;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AD12_RS01050;old_locus_tag=AD12_4700 NZ_JJLK01000090.1 Protein Homology CDS 121730 123958 . + 0 ID=cds-WP_000288597.1;Parent=gene-AD12_RS01050;Dbxref=GenBank:WP_000288597.1;Name=WP_000288597.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AD12_RS01050;product=clamp-binding protein CrfC;protein_id=WP_000288597.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 123955 124833 . + . ID=gene-AD12_RS01045;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AD12_RS01045;old_locus_tag=AD12_4701 NZ_JJLK01000090.1 Protein Homology CDS 123955 124833 . + 0 ID=cds-WP_000169198.1;Parent=gene-AD12_RS01045;Dbxref=GenBank:WP_000169198.1;Name=WP_000169198.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AD12_RS01045;product=YjcZ-like family protein;protein_id=WP_000169198.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 125097 126599 . + . ID=gene-AD12_RS01040;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AD12_RS01040;old_locus_tag=AD12_4702 NZ_JJLK01000090.1 Protein Homology CDS 125097 126599 . + 0 ID=cds-WP_001296882.1;Parent=gene-AD12_RS01040;Dbxref=GenBank:WP_001296882.1;Name=WP_001296882.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709830.2;locus_tag=AD12_RS01040;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001296882.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 126711 126800 . + . ID=gene-AD12_RS0125475;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AD12_RS0125475 NZ_JJLK01000090.1 Protein Homology CDS 126711 126800 . + 0 ID=cds-WP_000797656.1;Parent=gene-AD12_RS0125475;Dbxref=GenBank:WP_000797656.1;Name=WP_000797656.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AD12_RS0125475;product=LpxT activity modulator PmrR;protein_id=WP_000797656.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 126776 127876 . - . ID=gene-AD12_RS01035;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AD12_RS01035;old_locus_tag=AD12_4703 NZ_JJLK01000090.1 Protein Homology CDS 126776 127876 . - 0 ID=cds-WP_001051093.1;Parent=gene-AD12_RS01035;Dbxref=GenBank:WP_001051093.1;Name=WP_001051093.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AD12_RS01035;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051093.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 127877 128545 . - . ID=gene-AD12_RS01030;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AD12_RS01030;old_locus_tag=AD12_4704 NZ_JJLK01000090.1 Protein Homology CDS 127877 128545 . - 0 ID=cds-WP_000697919.1;Parent=gene-AD12_RS01030;Dbxref=GenBank:WP_000697919.1;Name=WP_000697919.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AD12_RS01030;product=two-component system response regulator BasR;protein_id=WP_000697919.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 128542 130185 . - . ID=gene-AD12_RS01025;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AD12_RS01025;old_locus_tag=AD12_4705 NZ_JJLK01000090.1 Protein Homology CDS 128542 130185 . - 0 ID=cds-WP_001298860.1;Parent=gene-AD12_RS01025;Dbxref=GenBank:WP_001298860.1;Name=WP_001298860.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AD12_RS01025;product=phosphoethanolamine transferase EptA;protein_id=WP_001298860.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 130289 131626 . - . ID=gene-AD12_RS01020;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AD12_RS01020;old_locus_tag=AD12_4706 NZ_JJLK01000090.1 Protein Homology CDS 130289 131626 . - 0 ID=cds-WP_000093154.1;Parent=gene-AD12_RS01020;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AD12_RS01020;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 131763 132524 . - . ID=gene-AD12_RS01015;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AD12_RS01015;old_locus_tag=AD12_4707 NZ_JJLK01000090.1 Protein Homology CDS 131763 132524 . - 0 ID=cds-WP_001217059.1;Parent=gene-AD12_RS01015;Dbxref=GenBank:WP_001217059.1;Name=WP_001217059.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313125.1;locus_tag=AD12_RS01015;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217059.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 132849 135116 . - . ID=gene-AD12_RS01010;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AD12_RS01010;old_locus_tag=AD12_4708 NZ_JJLK01000090.1 Protein Homology CDS 132849 135116 . - 0 ID=cds-WP_001307519.1;Parent=gene-AD12_RS01010;Dbxref=GenBank:WP_001307519.1;Name=WP_001307519.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AD12_RS01010;product=arginine decarboxylase;protein_id=WP_001307519.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 135315 136223 . - . ID=gene-AD12_RS01005;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AD12_RS01005;old_locus_tag=AD12_4709 NZ_JJLK01000090.1 Protein Homology CDS 135315 136223 . - 0 ID=cds-WP_001090758.1;Parent=gene-AD12_RS01005;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AD12_RS01005;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 136506 137861 . + . ID=gene-AD12_RS01000;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AD12_RS01000;old_locus_tag=AD12_4710 NZ_JJLK01000090.1 Protein Homology CDS 136506 137861 . + 0 ID=cds-WP_000988020.1;Parent=gene-AD12_RS01000;Dbxref=GenBank:WP_000988020.1;Name=WP_000988020.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AD12_RS01000;product=alpha-galactosidase;protein_id=WP_000988020.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 137964 139385 . + . ID=gene-AD12_RS00995;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AD12_RS00995;old_locus_tag=AD12_4711 NZ_JJLK01000090.1 Protein Homology CDS 137964 139385 . + 0 ID=cds-WP_000028114.1;Parent=gene-AD12_RS00995;Dbxref=GenBank:WP_000028114.1;Name=WP_000028114.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AD12_RS00995;product=melibiose:sodium transporter MelB;protein_id=WP_000028114.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 139524 140153 . - . ID=gene-AD12_RS00990;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AD12_RS00990;old_locus_tag=AD12_4712 NZ_JJLK01000090.1 Protein Homology CDS 139524 140153 . - 0 ID=cds-WP_000198733.1;Parent=gene-AD12_RS00990;Dbxref=GenBank:WP_000198733.1;Name=WP_000198733.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AD12_RS00990;product=DUF2238 domain-containing protein;protein_id=WP_000198733.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 140276 141922 . - . ID=gene-AD12_RS00985;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AD12_RS00985;old_locus_tag=AD12_4713 NZ_JJLK01000090.1 Protein Homology CDS 140276 141922 . - 0 ID=cds-WP_001399594.1;Parent=gene-AD12_RS00985;Dbxref=GenBank:WP_001399594.1;Name=WP_001399594.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AD12_RS00985;product=class I fumarate hydratase;protein_id=WP_001399594.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 142000 143340 . - . ID=gene-AD12_RS00980;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AD12_RS00980;old_locus_tag=AD12_4714 NZ_JJLK01000090.1 Protein Homology CDS 142000 143340 . - 0 ID=cds-WP_032286805.1;Parent=gene-AD12_RS00980;Dbxref=GenBank:WP_032286805.1;Name=WP_032286805.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AD12_RS00980;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_032286805.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 143911 144630 . - . ID=gene-AD12_RS00975;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AD12_RS00975;old_locus_tag=AD12_4715 NZ_JJLK01000090.1 Protein Homology CDS 143911 144630 . - 0 ID=cds-WP_000611288.1;Parent=gene-AD12_RS00975;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AD12_RS00975;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 144627 146258 . - . ID=gene-AD12_RS00970;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AD12_RS00970;old_locus_tag=AD12_4716 NZ_JJLK01000090.1 Protein Homology CDS 144627 146258 . - 0 ID=cds-WP_001216487.1;Parent=gene-AD12_RS00970;Dbxref=GenBank:WP_001216487.1;Name=WP_001216487.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AD12_RS00970;product=sensor histidine kinase;protein_id=WP_001216487.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 146439 146669 . + . ID=gene-AD12_RS00965;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AD12_RS00965;old_locus_tag=AD12_4718 NZ_JJLK01000090.1 Protein Homology CDS 146439 146669 . + 0 ID=cds-WP_000371700.1;Parent=gene-AD12_RS00965;Dbxref=GenBank:WP_000371700.1;Name=WP_000371700.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AD12_RS00965;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371700.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 146681 146953 . + . ID=gene-AD12_RS00960;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AD12_RS00960;old_locus_tag=AD12_4719 NZ_JJLK01000090.1 Protein Homology CDS 146681 146953 . + 0 ID=cds-WP_000405647.1;Parent=gene-AD12_RS00960;Dbxref=GenBank:WP_000405647.1;Name=WP_000405647.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=AD12_RS00960;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 147180 147476 . + . ID=gene-AD12_RS00955;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD12_RS00955;old_locus_tag=AD12_4720 NZ_JJLK01000090.1 Protein Homology CDS 147180 147476 . + 0 ID=cds-WP_001425728.1;Parent=gene-AD12_RS00955;Dbxref=GenBank:WP_001425728.1;Name=WP_001425728.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AD12_RS00955;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_001425728.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 147504 147677 . + . ID=gene-AD12_RS00950;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AD12_RS00950;old_locus_tag=AD12_4721 NZ_JJLK01000090.1 Protein Homology CDS 147504 147677 . + 0 ID=cds-WP_001173343.1;Parent=gene-AD12_RS00950;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AD12_RS00950;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 147796 149313 . - . ID=gene-AD12_RS00945;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD12_RS00945;old_locus_tag=AD12_4722 NZ_JJLK01000090.1 Protein Homology CDS 147796 149313 . - 0 ID=cds-WP_001295074.1;Parent=gene-AD12_RS00945;Dbxref=GenBank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD12_RS00945;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 149550 151007 . - . ID=gene-AD12_RS00940;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AD12_RS00940;old_locus_tag=AD12_4723 NZ_JJLK01000090.1 Protein Homology CDS 149550 151007 . - 0 ID=cds-WP_000856841.1;Parent=gene-AD12_RS00940;Dbxref=GenBank:WP_000856841.1;Name=WP_000856841.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AD12_RS00940;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856841.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 151066 153213 . - . ID=gene-AD12_RS00935;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AD12_RS00935;old_locus_tag=AD12_4724 NZ_JJLK01000090.1 Protein Homology CDS 151066 153213 . - 0 ID=cds-WP_001295383.1;Parent=gene-AD12_RS00935;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AD12_RS00935;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 153293 154627 . - . ID=gene-AD12_RS00930;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AD12_RS00930;old_locus_tag=AD12_4725 NZ_JJLK01000090.1 Protein Homology CDS 153293 154627 . - 0 ID=cds-WP_000092909.1;Parent=gene-AD12_RS00930;Dbxref=GenBank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AD12_RS00930;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 154993 156531 . - . ID=gene-AD12_RS00925;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AD12_RS00925;old_locus_tag=AD12_4726 NZ_JJLK01000090.1 Protein Homology CDS 154993 156531 . - 0 ID=cds-WP_001187182.1;Parent=gene-AD12_RS00925;Dbxref=GenBank:WP_001187182.1;Name=WP_001187182.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313142.1;locus_tag=AD12_RS00925;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187182.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 156791 156950 . - . ID=gene-AD12_RS29830;Name=AD12_RS29830;end_range=156950,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29830;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 156791 156950 . - 0 ID=cds-AD12_RS29830;Parent=gene-AD12_RS29830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=156950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AD12_RS29830;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 157148 157223 . - . ID=gene-AD12_RS00920;Name=AD12_RS00920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS00920;old_locus_tag=AD12_4727 NZ_JJLK01000090.1 tRNAscan-SE tRNA 157148 157223 . - . ID=rna-AD12_RS00920;Parent=gene-AD12_RS00920;anticodon=(pos:complement(157188..157190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00920;product=tRNA-Phe NZ_JJLK01000090.1 tRNAscan-SE exon 157148 157223 . - . ID=exon-AD12_RS00920-1;Parent=rna-AD12_RS00920;anticodon=(pos:complement(157188..157190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00920;product=tRNA-Phe NZ_JJLK01000090.1 RefSeq gene 157330 157905 . - . ID=gene-AD12_RS00915;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AD12_RS00915;old_locus_tag=AD12_4728 NZ_JJLK01000090.1 Protein Homology CDS 157330 157905 . - 0 ID=cds-WP_001188520.1;Parent=gene-AD12_RS00915;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AD12_RS00915;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 157942 159639 . - . ID=gene-AD12_RS00910;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AD12_RS00910;old_locus_tag=AD12_4729 NZ_JJLK01000090.1 Protein Homology CDS 157942 159639 . - 0 ID=cds-WP_000068978.1;Parent=gene-AD12_RS00910;Dbxref=GenBank:WP_000068978.1;Name=WP_000068978.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710001.1;locus_tag=AD12_RS00910;product=protein-disulfide reductase DsbD;protein_id=WP_000068978.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 159615 159953 . - . ID=gene-AD12_RS00905;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AD12_RS00905;old_locus_tag=AD12_4730 NZ_JJLK01000090.1 Protein Homology CDS 159615 159953 . - 0 ID=cds-WP_000883400.1;Parent=gene-AD12_RS00905;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AD12_RS00905;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 160069 161370 . - . ID=gene-AD12_RS00900;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AD12_RS00900;old_locus_tag=AD12_4731 NZ_JJLK01000090.1 Protein Homology CDS 160069 161370 . - 0 ID=cds-WP_000961957.1;Parent=gene-AD12_RS00900;Dbxref=GenBank:WP_000961957.1;Name=WP_000961957.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AD12_RS00900;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961957.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 161488 162924 . - . ID=gene-AD12_RS00895;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AD12_RS00895;old_locus_tag=AD12_4732 NZ_JJLK01000090.1 Protein Homology CDS 161488 162924 . - 0 ID=cds-WP_000069437.1;Parent=gene-AD12_RS00895;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AD12_RS00895;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 163261 163737 . + . ID=gene-AD12_RS00890;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AD12_RS00890;old_locus_tag=AD12_4733 NZ_JJLK01000090.1 Protein Homology CDS 163261 163737 . + 0 ID=cds-WP_001267448.1;Parent=gene-AD12_RS00890;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AD12_RS00890;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 163753 165009 . - . ID=gene-AD12_RS00885;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AD12_RS00885;old_locus_tag=AD12_4734 NZ_JJLK01000090.1 Protein Homology CDS 163753 165009 . - 0 ID=cds-WP_000015837.1;Parent=gene-AD12_RS00885;Dbxref=GenBank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AD12_RS00885;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 165285 165578 . + . ID=gene-AD12_RS00880;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AD12_RS00880;old_locus_tag=AD12_4735 NZ_JJLK01000090.1 Protein Homology CDS 165285 165578 . + 0 ID=cds-WP_001026276.1;Parent=gene-AD12_RS00880;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AD12_RS00880;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 165622 167268 . + . ID=gene-AD12_RS00875;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AD12_RS00875;old_locus_tag=AD12_4736 NZ_JJLK01000090.1 Protein Homology CDS 165622 167268 . + 0 ID=cds-WP_000729117.1;Parent=gene-AD12_RS00875;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AD12_RS00875;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 167406 167759 . + . ID=gene-AD12_RS00870;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AD12_RS00870;old_locus_tag=AD12_4737 NZ_JJLK01000090.1 Protein Homology CDS 167406 167759 . + 0 ID=cds-WP_000558209.1;Parent=gene-AD12_RS00870;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AD12_RS00870;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 167952 168821 . - . ID=gene-AD12_RS00865;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AD12_RS00865;old_locus_tag=AD12_4739 NZ_JJLK01000090.1 Protein Homology CDS 167952 168821 . - 0 ID=cds-WP_001008044.1;Parent=gene-AD12_RS00865;Dbxref=GenBank:WP_001008044.1;Name=WP_001008044.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313153.1;locus_tag=AD12_RS00865;product=YjeJ family protein;protein_id=WP_001008044.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 169216 170244 . - . ID=gene-AD12_RS00860;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AD12_RS00860;old_locus_tag=AD12_4740 NZ_JJLK01000090.1 Protein Homology CDS 169216 170244 . - 0 ID=cds-WP_000940530.1;Parent=gene-AD12_RS00860;Dbxref=GenBank:WP_000940530.1;Name=WP_000940530.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710013.1;locus_tag=AD12_RS00860;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940530.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 170286 170852 . + . ID=gene-AD12_RS00855;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AD12_RS00855;old_locus_tag=AD12_4741 NZ_JJLK01000090.1 Protein Homology CDS 170286 170852 . + 0 ID=cds-WP_000257278.1;Parent=gene-AD12_RS00855;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AD12_RS00855;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 170904 171029 . + . ID=gene-AD12_RS00850;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AD12_RS00850;old_locus_tag=AD12_4742 NZ_JJLK01000090.1 Protein Homology CDS 170904 171029 . + 0 ID=cds-WP_000977757.1;Parent=gene-AD12_RS00850;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AD12_RS00850;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 171140 171286 . + . ID=gene-AD12_RS00845;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AD12_RS00845;old_locus_tag=AD12_4743 NZ_JJLK01000090.1 Protein Homology CDS 171140 171286 . + 0 ID=cds-WP_000239596.1;Parent=gene-AD12_RS00845;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AD12_RS00845;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 171461 171778 . + . ID=gene-AD12_RS00840;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AD12_RS00840;old_locus_tag=AD12_4744 NZ_JJLK01000090.1 Protein Homology CDS 171461 171778 . + 0 ID=cds-WP_000118482.1;Parent=gene-AD12_RS00840;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AD12_RS00840;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 171775 172308 . - . ID=gene-AD12_RS00835;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AD12_RS00835;old_locus_tag=AD12_4745 NZ_JJLK01000090.1 Protein Homology CDS 171775 172308 . - 0 ID=cds-WP_001238369.1;Parent=gene-AD12_RS00835;Dbxref=GenBank:WP_001238369.1;Name=WP_001238369.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AD12_RS00835;product=lipocalin Blc;protein_id=WP_001238369.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 172397 173530 . - . ID=gene-AD12_RS00830;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AD12_RS00830;old_locus_tag=AD12_4746 NZ_JJLK01000090.1 Protein Homology CDS 172397 173530 . - 0 ID=cds-WP_001339477.1;Parent=gene-AD12_RS00830;Dbxref=GenBank:WP_001339477.1;Name=WP_001339477.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AD12_RS00830;product=BlaEC family class C beta-lactamase;protein_id=WP_001339477.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 173593 173952 . - . ID=gene-AD12_RS00825;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AD12_RS00825;old_locus_tag=AD12_4747 NZ_JJLK01000090.1 Protein Homology CDS 173593 173952 . - 0 ID=cds-WP_001299198.1-2;Parent=gene-AD12_RS00825;Dbxref=GenBank:WP_001299198.1;Name=WP_001299198.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AD12_RS00825;product=fumarate reductase subunit FrdD;protein_id=WP_001299198.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 173963 174358 . - . ID=gene-AD12_RS00820;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AD12_RS00820;old_locus_tag=AD12_4748 NZ_JJLK01000090.1 Protein Homology CDS 173963 174358 . - 0 ID=cds-WP_000208757.1-2;Parent=gene-AD12_RS00820;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AD12_RS00820;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 174369 175103 . - . ID=gene-AD12_RS00815;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AD12_RS00815;old_locus_tag=AD12_4749 NZ_JJLK01000090.1 Protein Homology CDS 174369 175103 . - 0 ID=cds-WP_000829498.1-2;Parent=gene-AD12_RS00815;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AD12_RS00815;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 175096 176904 . - . ID=gene-AD12_RS00810;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AD12_RS00810;old_locus_tag=AD12_4750 NZ_JJLK01000090.1 Protein Homology CDS 175096 176904 . - 0 ID=cds-WP_001192973.1;Parent=gene-AD12_RS00810;Dbxref=GenBank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AD12_RS00810;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 177229 178206 . + . ID=gene-AD12_RS00805;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AD12_RS00805;old_locus_tag=AD12_4751 NZ_JJLK01000090.1 Protein Homology CDS 177229 178206 . + 0 ID=cds-WP_000004770.1;Parent=gene-AD12_RS00805;Dbxref=GenBank:WP_000004770.1;Name=WP_000004770.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AD12_RS00805;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004770.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 178425 179927 . + . ID=gene-AD12_RS00800;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AD12_RS00800;old_locus_tag=AD12_4752 NZ_JJLK01000090.1 Protein Homology CDS 178425 179927 . + 0 ID=cds-WP_001339478.1;Parent=gene-AD12_RS00800;Dbxref=GenBank:WP_001339478.1;Name=WP_001339478.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AD12_RS00800;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001339478.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 180078 183401 . - . ID=gene-AD12_RS00795;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AD12_RS00795;old_locus_tag=AD12_4753 NZ_JJLK01000090.1 Protein Homology CDS 180078 183401 . - 0 ID=cds-WP_001236847.1;Parent=gene-AD12_RS00795;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AD12_RS00795;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 183423 184391 . - . ID=gene-AD12_RS00790;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD12_RS00790;old_locus_tag=AD12_4754 NZ_JJLK01000090.1 Protein Homology CDS 183423 184391 . - 0 ID=cds-WP_000934920.1;Parent=gene-AD12_RS00790;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AD12_RS00790;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 184488 185540 . - . ID=gene-AD12_RS00785;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD12_RS00785;old_locus_tag=AD12_4755 NZ_JJLK01000090.1 Protein Homology CDS 184488 185540 . - 0 ID=cds-WP_000041970.1;Parent=gene-AD12_RS00785;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AD12_RS00785;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 185635 186180 . + . ID=gene-AD12_RS00780;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD12_RS00780;old_locus_tag=AD12_4756 NZ_JJLK01000090.1 Protein Homology CDS 185635 186180 . + 0 ID=cds-WP_001295188.1;Parent=gene-AD12_RS00780;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AD12_RS00780;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 186391 186466 . + . ID=gene-AD12_RS00775;Name=AD12_RS00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS00775;old_locus_tag=AD12_4757 NZ_JJLK01000090.1 tRNAscan-SE tRNA 186391 186466 . + . ID=rna-AD12_RS00775;Parent=gene-AD12_RS00775;anticodon=(pos:186424..186426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00775;product=tRNA-Gly NZ_JJLK01000090.1 tRNAscan-SE exon 186391 186466 . + . ID=exon-AD12_RS00775-1;Parent=rna-AD12_RS00775;anticodon=(pos:186424..186426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00775;product=tRNA-Gly NZ_JJLK01000090.1 RefSeq gene 186503 186578 . + . ID=gene-AD12_RS00770;Name=AD12_RS00770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS00770;old_locus_tag=AD12_4758 NZ_JJLK01000090.1 tRNAscan-SE tRNA 186503 186578 . + . ID=rna-AD12_RS00770;Parent=gene-AD12_RS00770;anticodon=(pos:186536..186538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00770;product=tRNA-Gly NZ_JJLK01000090.1 tRNAscan-SE exon 186503 186578 . + . ID=exon-AD12_RS00770-1;Parent=rna-AD12_RS00770;anticodon=(pos:186536..186538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00770;product=tRNA-Gly NZ_JJLK01000090.1 RefSeq gene 186614 186689 . + . ID=gene-AD12_RS00765;Name=AD12_RS00765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS00765;old_locus_tag=AD12_4759 NZ_JJLK01000090.1 tRNAscan-SE tRNA 186614 186689 . + . ID=rna-AD12_RS00765;Parent=gene-AD12_RS00765;anticodon=(pos:186647..186649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00765;product=tRNA-Gly NZ_JJLK01000090.1 tRNAscan-SE exon 186614 186689 . + . ID=exon-AD12_RS00765-1;Parent=rna-AD12_RS00765;anticodon=(pos:186647..186649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00765;product=tRNA-Gly NZ_JJLK01000090.1 RefSeq gene 186923 186976 . + . ID=gene-AD12_RS28955;Name=AD12_RS28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28955 NZ_JJLK01000090.1 Protein Homology CDS 186923 186976 . + 0 ID=cds-WP_010723271.1;Parent=gene-AD12_RS28955;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD12_RS28955;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 186959 188098 . - . ID=gene-AD12_RS00760;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD12_RS00760;old_locus_tag=AD12_4760 NZ_JJLK01000090.1 Protein Homology CDS 186959 188098 . - 0 ID=cds-WP_001294219.1;Parent=gene-AD12_RS00760;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD12_RS00760;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 188097 189644 . + . ID=gene-AD12_RS00755;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AD12_RS00755;old_locus_tag=AD12_4761 NZ_JJLK01000090.1 Protein Homology CDS 188097 189644 . + 0 ID=cds-WP_001307537.1;Parent=gene-AD12_RS00755;Dbxref=GenBank:WP_001307537.1;Name=WP_001307537.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD12_RS00755;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001307537.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 189616 190077 . + . ID=gene-AD12_RS00750;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AD12_RS00750;old_locus_tag=AD12_4762 NZ_JJLK01000090.1 Protein Homology CDS 189616 190077 . + 0 ID=cds-WP_000981977.1;Parent=gene-AD12_RS00750;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AD12_RS00750;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 190096 191433 . + . ID=gene-AD12_RS00745;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AD12_RS00745;old_locus_tag=AD12_4763 NZ_JJLK01000090.1 Protein Homology CDS 190096 191433 . + 0 ID=cds-WP_000990321.1;Parent=gene-AD12_RS00745;Dbxref=GenBank:WP_000990321.1;Name=WP_000990321.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AD12_RS00745;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990321.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 191443 193290 . + . ID=gene-AD12_RS00740;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AD12_RS00740;old_locus_tag=AD12_4764 NZ_JJLK01000090.1 Protein Homology CDS 191443 193290 . + 0 ID=cds-WP_032286806.1;Parent=gene-AD12_RS00740;Dbxref=GenBank:WP_032286806.1;Name=WP_032286806.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AD12_RS00740;product=DNA mismatch repair endonuclease MutL;protein_id=WP_032286806.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 193283 194233 . + . ID=gene-AD12_RS00735;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AD12_RS00735;old_locus_tag=AD12_4765 NZ_JJLK01000090.1 Protein Homology CDS 193283 194233 . + 0 ID=cds-WP_001280345.1;Parent=gene-AD12_RS00735;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AD12_RS00735;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 194319 194627 . + . ID=gene-AD12_RS00730;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AD12_RS00730;old_locus_tag=AD12_4766 NZ_JJLK01000090.1 Protein Homology CDS 194319 194627 . + 0 ID=cds-WP_001051883.1;Parent=gene-AD12_RS00730;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AD12_RS00730;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 194702 195982 . + . ID=gene-AD12_RS00725;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AD12_RS00725;old_locus_tag=AD12_4767 NZ_JJLK01000090.1 Protein Homology CDS 194702 195982 . + 0 ID=cds-WP_000460360.1;Parent=gene-AD12_RS00725;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AD12_RS00725;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 196068 197327 . + . ID=gene-AD12_RS00720;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AD12_RS00720;old_locus_tag=AD12_4768 NZ_JJLK01000090.1 Protein Homology CDS 196068 197327 . + 0 ID=cds-WP_000312488.1;Parent=gene-AD12_RS00720;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AD12_RS00720;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 197330 198334 . + . ID=gene-AD12_RS00715;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AD12_RS00715;old_locus_tag=AD12_4769 NZ_JJLK01000090.1 Protein Homology CDS 197330 198334 . + 0 ID=cds-WP_001232412.1;Parent=gene-AD12_RS00715;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AD12_RS00715;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 198416 198613 . + . ID=gene-AD12_RS00710;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AD12_RS00710;old_locus_tag=AD12_4770 NZ_JJLK01000090.1 Protein Homology CDS 198416 198613 . + 0 ID=cds-WP_001089295.1;Parent=gene-AD12_RS00710;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AD12_RS00710;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 198717 200015 . + . ID=gene-AD12_RS00705;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AD12_RS00705;old_locus_tag=AD12_4771 NZ_JJLK01000090.1 Protein Homology CDS 198717 200015 . + 0 ID=cds-WP_000527955.1;Parent=gene-AD12_RS00705;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AD12_RS00705;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 200220 200645 . + . ID=gene-AD12_RS00700;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AD12_RS00700;old_locus_tag=AD12_4772 NZ_JJLK01000090.1 Protein Homology CDS 200220 200645 . + 0 ID=cds-WP_001177639.1;Parent=gene-AD12_RS00700;Dbxref=GenBank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AD12_RS00700;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 200684 203125 . + . ID=gene-AD12_RS00695;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AD12_RS00695;old_locus_tag=AD12_4773 NZ_JJLK01000090.1 Protein Homology CDS 200684 203125 . + 0 ID=cds-WP_000076316.1;Parent=gene-AD12_RS00695;Dbxref=GenBank:WP_000076316.1;Name=WP_000076316.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AD12_RS00695;product=ribonuclease R;protein_id=WP_000076316.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 203305 204036 . + . ID=gene-AD12_RS00690;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AD12_RS00690;old_locus_tag=AD12_4774 NZ_JJLK01000090.1 Protein Homology CDS 203305 204036 . + 0 ID=cds-WP_001293282.1;Parent=gene-AD12_RS00690;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AD12_RS00690;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 204163 204564 . + . ID=gene-AD12_RS00685;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AD12_RS00685;old_locus_tag=AD12_4775 NZ_JJLK01000090.1 Protein Homology CDS 204163 204564 . + 0 ID=cds-WP_000220137.1;Parent=gene-AD12_RS00685;Dbxref=GenBank:WP_000220137.1;Name=WP_000220137.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AD12_RS00685;product=YjfI family protein;protein_id=WP_000220137.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 204583 205281 . + . ID=gene-AD12_RS00680;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AD12_RS00680;old_locus_tag=AD12_4776 NZ_JJLK01000090.1 Protein Homology CDS 204583 205281 . + 0 ID=cds-WP_000511955.1;Parent=gene-AD12_RS00680;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AD12_RS00680;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 205332 205991 . + . ID=gene-AD12_RS00675;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AD12_RS00675;old_locus_tag=AD12_4777 NZ_JJLK01000090.1 Protein Homology CDS 205332 205991 . + 0 ID=cds-WP_000012553.1;Parent=gene-AD12_RS00675;Dbxref=GenBank:WP_000012553.1;Name=WP_000012553.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AD12_RS00675;product=YjfK family protein;protein_id=WP_000012553.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 206009 206407 . + . ID=gene-AD12_RS0125495;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AD12_RS0125495 NZ_JJLK01000090.1 Protein Homology CDS 206009 206407 . + 0 ID=cds-WP_000547760.1;Parent=gene-AD12_RS0125495;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AD12_RS0125495;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 206417 207055 . + . ID=gene-AD12_RS00670;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AD12_RS00670;old_locus_tag=AD12_4779 NZ_JJLK01000090.1 Protein Homology CDS 206417 207055 . + 0 ID=cds-WP_000101653.1;Parent=gene-AD12_RS00670;Dbxref=GenBank:WP_000101653.1;Name=WP_000101653.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313188.1;locus_tag=AD12_RS00670;product=DUF1190 domain-containing protein;protein_id=WP_000101653.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 207058 208221 . + . ID=gene-AD12_RS00665;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AD12_RS00665;old_locus_tag=AD12_4780 NZ_JJLK01000090.1 Protein Homology CDS 207058 208221 . + 0 ID=cds-WP_000943987.1;Parent=gene-AD12_RS00665;Dbxref=GenBank:WP_000943987.1;Name=WP_000943987.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710049.2;locus_tag=AD12_RS00665;product=glutathionylspermidine synthase family protein;protein_id=WP_000943987.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 208305 209930 . + . ID=gene-AD12_RS00660;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AD12_RS00660;old_locus_tag=AD12_4781 NZ_JJLK01000090.1 Protein Homology CDS 208305 209930 . + 0 ID=cds-WP_001504984.1;Parent=gene-AD12_RS00660;Dbxref=GenBank:WP_001504984.1;Name=WP_001504984.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AD12_RS00660;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001504984.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 210047 210322 . - . ID=gene-AD12_RS00655;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AD12_RS00655;old_locus_tag=AD12_4782 NZ_JJLK01000090.1 Protein Homology CDS 210047 210322 . - 0 ID=cds-WP_000811566.1;Parent=gene-AD12_RS00655;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AD12_RS00655;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 210471 210800 . - . ID=gene-AD12_RS00650;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AD12_RS00650;old_locus_tag=AD12_4783 NZ_JJLK01000090.1 Protein Homology CDS 210471 210800 . - 0 ID=cds-WP_000492885.1;Parent=gene-AD12_RS00650;Dbxref=GenBank:WP_000492885.1;Name=WP_000492885.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313192.2;locus_tag=AD12_RS00650;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000492885.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 210982 211731 . + . ID=gene-AD12_RS00645;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AD12_RS00645;old_locus_tag=AD12_4784 NZ_JJLK01000090.1 Protein Homology CDS 210982 211731 . + 0 ID=cds-WP_032286807.1;Parent=gene-AD12_RS00645;Dbxref=GenBank:WP_032286807.1;Name=WP_032286807.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418611.1;locus_tag=AD12_RS00645;product=esterase;protein_id=WP_032286807.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 211728 212483 . - . ID=gene-AD12_RS00640;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AD12_RS00640;old_locus_tag=AD12_4785 NZ_JJLK01000090.1 Protein Homology CDS 211728 212483 . - 0 ID=cds-WP_000133631.1;Parent=gene-AD12_RS00640;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AD12_RS00640;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 212591 213655 . - . ID=gene-AD12_RS00635;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AD12_RS00635;old_locus_tag=AD12_4786 NZ_JJLK01000090.1 Protein Homology CDS 212591 213655 . - 0 ID=cds-WP_001295191.1;Parent=gene-AD12_RS00635;Dbxref=GenBank:WP_001295191.1;Name=WP_001295191.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AD12_RS00635;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001295191.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 214010 215407 . + . ID=gene-AD12_RS00630;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AD12_RS00630;old_locus_tag=AD12_4787 NZ_JJLK01000090.1 Protein Homology CDS 214010 215407 . + 0 ID=cds-WP_001296880.1;Parent=gene-AD12_RS00630;Dbxref=GenBank:WP_001296880.1;Name=WP_001296880.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AD12_RS00630;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001296880.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 215423 215728 . + . ID=gene-AD12_RS00625;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AD12_RS00625;old_locus_tag=AD12_4788 NZ_JJLK01000090.1 Protein Homology CDS 215423 215728 . + 0 ID=cds-WP_000218362.1;Parent=gene-AD12_RS00625;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AD12_RS00625;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 215738 216202 . + . ID=gene-AD12_RS00620;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AD12_RS00620;old_locus_tag=AD12_4789 NZ_JJLK01000090.1 Protein Homology CDS 215738 216202 . + 0 ID=cds-WP_000776505.1;Parent=gene-AD12_RS00620;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AD12_RS00620;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 216216 216866 . + . ID=gene-AD12_RS00615;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD12_RS00615;old_locus_tag=AD12_4790 NZ_JJLK01000090.1 Protein Homology CDS 216216 216866 . + 0 ID=cds-WP_000056760.1;Parent=gene-AD12_RS00615;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AD12_RS00615;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 216876 217730 . + . ID=gene-AD12_RS00610;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AD12_RS00610;old_locus_tag=AD12_4791 NZ_JJLK01000090.1 Protein Homology CDS 216876 217730 . + 0 ID=cds-WP_000949511.1;Parent=gene-AD12_RS00610;Dbxref=GenBank:WP_000949511.1;Name=WP_000949511.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AD12_RS00610;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949511.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 217730 218416 . + . ID=gene-AD12_RS00605;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AD12_RS00605;old_locus_tag=AD12_4792 NZ_JJLK01000090.1 Protein Homology CDS 217730 218416 . + 0 ID=cds-WP_001170828.1;Parent=gene-AD12_RS00605;Dbxref=GenBank:WP_001170828.1;Name=WP_001170828.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313201.1;locus_tag=AD12_RS00605;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170828.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 218545 218820 . - . ID=gene-AD12_RS00600;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AD12_RS00600;old_locus_tag=AD12_4793 NZ_JJLK01000090.1 Protein Homology CDS 218545 218820 . - 0 ID=cds-WP_000492914.1;Parent=gene-AD12_RS00600;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AD12_RS00600;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 219147 219542 . + . ID=gene-AD12_RS00595;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AD12_RS00595;old_locus_tag=AD12_4794 NZ_JJLK01000090.1 Protein Homology CDS 219147 219542 . + 0 ID=cds-WP_001216676.1;Parent=gene-AD12_RS00595;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AD12_RS00595;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 219549 219863 . + . ID=gene-AD12_RS0125505;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AD12_RS0125505 NZ_JJLK01000090.1 Protein Homology CDS 219549 219863 . + 0 ID=cds-WP_001347238.1;Parent=gene-AD12_RS0125505;Dbxref=GenBank:WP_001347238.1;Name=WP_001347238.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AD12_RS0125505;product=primosomal replication protein N;protein_id=WP_001347238.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 219868 220095 . + . ID=gene-AD12_RS00590;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AD12_RS00590;old_locus_tag=AD12_4795 NZ_JJLK01000090.1 Protein Homology CDS 219868 220095 . + 0 ID=cds-WP_000135199.1;Parent=gene-AD12_RS00590;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AD12_RS00590;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 220137 220586 . + . ID=gene-AD12_RS00585;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AD12_RS00585;old_locus_tag=AD12_4796 NZ_JJLK01000090.1 Protein Homology CDS 220137 220586 . + 0 ID=cds-WP_001196062.1;Parent=gene-AD12_RS00585;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AD12_RS00585;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 220698 221669 . - . ID=gene-AD12_RS00580;Name=AD12_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00580;old_locus_tag=AD12_4797 NZ_JJLK01000090.1 Protein Homology CDS 220698 221669 . - 0 ID=cds-WP_000695886.1;Parent=gene-AD12_RS00580;Dbxref=GenBank:WP_000695886.1;Name=WP_000695886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422748.1;locus_tag=AD12_RS00580;product=TRAP transporter substrate-binding protein;protein_id=WP_000695886.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 221722 223023 . - . ID=gene-AD12_RS00575;Name=AD12_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00575;old_locus_tag=AD12_4798 NZ_JJLK01000090.1 Protein Homology CDS 221722 223023 . - 0 ID=cds-WP_000386846.1;Parent=gene-AD12_RS00575;Dbxref=GenBank:WP_000386846.1;Name=WP_000386846.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386845.1;locus_tag=AD12_RS00575;product=TRAP transporter large permease;protein_id=WP_000386846.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 223066 223542 . - . ID=gene-AD12_RS00570;Name=AD12_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00570;old_locus_tag=AD12_4799 NZ_JJLK01000090.1 Protein Homology CDS 223066 223542 . - 0 ID=cds-WP_001244358.1;Parent=gene-AD12_RS00570;Dbxref=GenBank:WP_001244358.1;Name=WP_001244358.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311688.1;locus_tag=AD12_RS00570;product=TRAP transporter small permease;protein_id=WP_001244358.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 223563 225644 . - . ID=gene-AD12_RS00565;Name=AD12_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00565;old_locus_tag=AD12_4800 NZ_JJLK01000090.1 Protein Homology CDS 223563 225644 . - 0 ID=cds-WP_032286808.1;Parent=gene-AD12_RS00565;Dbxref=GenBank:WP_032286808.1;Name=WP_032286808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766390.1;locus_tag=AD12_RS00565;product=FAD-dependent oxidoreductase;protein_id=WP_032286808.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 225641 227182 . - . ID=gene-AD12_RS00560;Name=AD12_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00560;old_locus_tag=AD12_4801 NZ_JJLK01000090.1 Protein Homology CDS 225641 227182 . - 0 ID=cds-WP_001226944.1;Parent=gene-AD12_RS00560;Dbxref=GenBank:WP_001226944.1;Name=WP_001226944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AD12_RS00560;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001226944.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 227192 227968 . - . ID=gene-AD12_RS00555;Name=AD12_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00555;old_locus_tag=AD12_4802 NZ_JJLK01000090.1 Protein Homology CDS 227192 227968 . - 0 ID=cds-WP_001283566.1;Parent=gene-AD12_RS00555;Dbxref=GenBank:WP_001283566.1;Name=WP_001283566.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AD12_RS00555;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283566.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 227978 228820 . - . ID=gene-AD12_RS00550;Name=AD12_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00550;old_locus_tag=AD12_4803 NZ_JJLK01000090.1 Protein Homology CDS 227978 228820 . - 0 ID=cds-WP_001205226.1;Parent=gene-AD12_RS00550;Dbxref=GenBank:WP_001205226.1;Name=WP_001205226.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AD12_RS00550;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_001205226.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 228830 229621 . - . ID=gene-AD12_RS00545;Name=AD12_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00545;old_locus_tag=AD12_4804 NZ_JJLK01000090.1 Protein Homology CDS 228830 229621 . - 0 ID=cds-WP_000843387.1;Parent=gene-AD12_RS00545;Dbxref=GenBank:WP_000843387.1;Name=WP_000843387.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AD12_RS00545;product=3-ketoacyl-ACP reductase;protein_id=WP_000843387.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 229834 230481 . + . ID=gene-AD12_RS00540;Name=AD12_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00540;old_locus_tag=AD12_4805 NZ_JJLK01000090.1 Protein Homology CDS 229834 230481 . + 0 ID=cds-WP_001299246.1;Parent=gene-AD12_RS00540;Dbxref=GenBank:WP_001299246.1;Name=WP_001299246.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AD12_RS00540;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001299246.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 230465 231103 . - . ID=gene-AD12_RS00535;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AD12_RS00535;old_locus_tag=AD12_4806 NZ_JJLK01000090.1 Protein Homology CDS 230465 231103 . - 0 ID=cds-WP_001119478.1;Parent=gene-AD12_RS00535;Dbxref=GenBank:WP_001119478.1;Name=WP_001119478.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AD12_RS00535;product=cell division protein YtfB;protein_id=WP_001119478.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 231322 231942 . + . ID=gene-AD12_RS00530;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AD12_RS00530;old_locus_tag=AD12_4807 NZ_JJLK01000090.1 Protein Homology CDS 231322 231942 . + 0 ID=cds-WP_000211225.1;Parent=gene-AD12_RS00530;Dbxref=GenBank:WP_000211225.1;Name=WP_000211225.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AD12_RS00530;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 232251 233654 . + . ID=gene-AD12_RS00525;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AD12_RS00525;old_locus_tag=AD12_4808 NZ_JJLK01000090.1 Protein Homology CDS 232251 233654 . + 0 ID=cds-WP_032286809.1;Parent=gene-AD12_RS00525;Dbxref=GenBank:WP_032286809.1;Name=WP_032286809.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593878.1;locus_tag=AD12_RS00525;product=D-serine/D-alanine/glycine transporter;protein_id=WP_032286809.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 233921 234349 . + . ID=gene-AD12_RS00520;Name=AD12_RS00520;end_range=234349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS00520;old_locus_tag=AD12_4809;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 233921 234349 . + 0 ID=cds-AD12_RS00520;Parent=gene-AD12_RS00520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=234349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246814.1;locus_tag=AD12_RS00520;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 234454 235521 . + . ID=gene-AD12_RS00515;Name=AD12_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00515;old_locus_tag=AD12_4810 NZ_JJLK01000090.1 Protein Homology CDS 234454 235521 . + 0 ID=cds-WP_003602431.1;Parent=gene-AD12_RS00515;Dbxref=GenBank:WP_003602431.1;Name=WP_003602431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317586.1;locus_tag=AD12_RS00515;product=hypothetical protein;protein_id=WP_003602431.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 235768 236430 . - . ID=gene-AD12_RS00510;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AD12_RS00510;old_locus_tag=AD12_4811 NZ_JJLK01000090.1 Protein Homology CDS 235768 236430 . - 0 ID=cds-WP_000331465.1;Parent=gene-AD12_RS00510;Dbxref=GenBank:WP_000331465.1;Name=WP_000331465.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AD12_RS00510;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331465.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 236538 237503 . - . ID=gene-AD12_RS00505;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AD12_RS00505;old_locus_tag=AD12_4812 NZ_JJLK01000090.1 Protein Homology CDS 236538 237503 . - 0 ID=cds-WP_001324314.1;Parent=gene-AD12_RS00505;Dbxref=GenBank:WP_001324314.1;Name=WP_001324314.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AD12_RS00505;product=DMT family transporter;protein_id=WP_001324314.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 237611 238471 . - . ID=gene-AD12_RS00500;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AD12_RS00500;old_locus_tag=AD12_4813 NZ_JJLK01000090.1 Protein Homology CDS 237611 238471 . - 0 ID=cds-WP_000560563.1;Parent=gene-AD12_RS00500;Dbxref=GenBank:WP_000560563.1;Name=WP_000560563.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418632.1;locus_tag=AD12_RS00500;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560563.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 238560 238940 . + . ID=gene-AD12_RS00495;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AD12_RS00495;old_locus_tag=AD12_4814 NZ_JJLK01000090.1 Protein Homology CDS 238560 238940 . + 0 ID=cds-WP_000084622.1;Parent=gene-AD12_RS00495;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AD12_RS00495;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 239069 241012 . - . ID=gene-AD12_RS00490;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AD12_RS00490;old_locus_tag=AD12_4815 NZ_JJLK01000090.1 Protein Homology CDS 239069 241012 . - 0 ID=cds-WP_032268541.1;Parent=gene-AD12_RS00490;Dbxref=GenBank:WP_032268541.1;Name=WP_032268541.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AD12_RS00490;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_032268541.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 241202 241942 . + . ID=gene-AD12_RS00485;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AD12_RS00485;old_locus_tag=AD12_4816 NZ_JJLK01000090.1 Protein Homology CDS 241202 241942 . + 0 ID=cds-WP_000886909.1;Parent=gene-AD12_RS00485;Dbxref=GenBank:WP_000886909.1;Name=WP_000886909.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AD12_RS00485;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886909.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 241932 242489 . - . ID=gene-AD12_RS00480;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AD12_RS00480;old_locus_tag=AD12_4817 NZ_JJLK01000090.1 Protein Homology CDS 241932 242489 . - 0 ID=cds-WP_000175286.1;Parent=gene-AD12_RS00480;Dbxref=GenBank:WP_000175286.1;Name=WP_000175286.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AD12_RS00480;product=YtfJ family protein;protein_id=WP_000175286.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 242814 243020 . + . ID=gene-AD12_RS00475;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AD12_RS00475;old_locus_tag=AD12_4818 NZ_JJLK01000090.1 Protein Homology CDS 242814 243020 . + 0 ID=cds-WP_000689228.1;Parent=gene-AD12_RS00475;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AD12_RS00475;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 243082 244425 . - . ID=gene-AD12_RS00470;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AD12_RS00470;old_locus_tag=AD12_4819 NZ_JJLK01000090.1 Protein Homology CDS 243082 244425 . - 0 ID=cds-WP_000935042.1;Parent=gene-AD12_RS00470;Dbxref=GenBank:WP_000935042.1;Name=WP_000935042.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709980.1;locus_tag=AD12_RS00470;product=hemolysin family protein;protein_id=WP_000935042.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 244748 245386 . - . ID=gene-AD12_RS00465;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AD12_RS00465;old_locus_tag=AD12_4820 NZ_JJLK01000090.1 Protein Homology CDS 244748 245386 . - 0 ID=cds-WP_001295196.1;Parent=gene-AD12_RS00465;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AD12_RS00465;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 245592 247325 . + . ID=gene-AD12_RS00455;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AD12_RS00455;old_locus_tag=AD12_4822 NZ_JJLK01000090.1 Protein Homology CDS 245592 247325 . + 0 ID=cds-WP_001269327.1;Parent=gene-AD12_RS00455;Dbxref=GenBank:WP_001269327.1;Name=WP_001269327.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AD12_RS00455;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 247322 251101 . + . ID=gene-AD12_RS00450;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AD12_RS00450;old_locus_tag=AD12_4823 NZ_JJLK01000090.1 Protein Homology CDS 247322 251101 . + 0 ID=cds-WP_000060921.1;Parent=gene-AD12_RS00450;Dbxref=GenBank:WP_000060921.1;Name=WP_000060921.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709977.1;locus_tag=AD12_RS00450;product=autotransporter assembly complex protein TamB;protein_id=WP_000060921.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 251104 251445 . + . ID=gene-AD12_RS00445;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AD12_RS00445;old_locus_tag=AD12_4824 NZ_JJLK01000090.1 Protein Homology CDS 251104 251445 . + 0 ID=cds-WP_001219160.1;Parent=gene-AD12_RS00445;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AD12_RS00445;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 251658 251909 . + . ID=gene-AD12_RS0125510;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AD12_RS0125510;old_locus_tag=AD12_4825 NZ_JJLK01000090.1 Protein Homology CDS 251658 251909 . + 0 ID=cds-WP_001223208.1;Parent=gene-AD12_RS0125510;Dbxref=GenBank:WP_001223208.1;Name=WP_001223208.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AD12_RS0125510;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 251903 252253 . + . ID=gene-AD12_RS00440;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AD12_RS00440;old_locus_tag=AD12_4826 NZ_JJLK01000090.1 Protein Homology CDS 251903 252253 . + 0 ID=cds-WP_000239579.1;Parent=gene-AD12_RS00440;Dbxref=GenBank:WP_000239579.1;Name=WP_000239579.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AD12_RS00440;product=endoribonuclease toxin ChpB;protein_id=WP_000239579.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 252333 252863 . - . ID=gene-AD12_RS00435;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AD12_RS00435;old_locus_tag=AD12_4827 NZ_JJLK01000090.1 Protein Homology CDS 252333 252863 . - 0 ID=cds-WP_000055072.1;Parent=gene-AD12_RS00435;Dbxref=GenBank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AD12_RS00435;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 253173 254129 . + . ID=gene-AD12_RS00430;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AD12_RS00430;old_locus_tag=AD12_4828 NZ_JJLK01000090.1 Protein Homology CDS 253173 254129 . + 0 ID=cds-WP_000265933.1;Parent=gene-AD12_RS00430;Dbxref=GenBank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AD12_RS00430;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 254439 255941 . + . ID=gene-AD12_RS00425;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AD12_RS00425;old_locus_tag=AD12_4829 NZ_JJLK01000090.1 Protein Homology CDS 254439 255941 . + 0 ID=cds-WP_000205793.1;Parent=gene-AD12_RS00425;Dbxref=GenBank:WP_000205793.1;Name=WP_000205793.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AD12_RS00425;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000205793.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 255955 256977 . + . ID=gene-AD12_RS00420;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AD12_RS00420;old_locus_tag=AD12_4830 NZ_JJLK01000090.1 Protein Homology CDS 255955 256977 . + 0 ID=cds-WP_001339490.1;Parent=gene-AD12_RS00420;Dbxref=GenBank:WP_001339490.1;Name=WP_001339490.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AD12_RS00420;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001339490.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 256964 257959 . + . ID=gene-AD12_RS00415;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AD12_RS00415;old_locus_tag=AD12_4831 NZ_JJLK01000090.1 Protein Homology CDS 256964 257959 . + 0 ID=cds-WP_000595986.1;Parent=gene-AD12_RS00415;Dbxref=GenBank:WP_000595986.1;Name=WP_000595986.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AD12_RS00415;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000595986.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 257992 258990 . - . ID=gene-AD12_RS00410;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AD12_RS00410;old_locus_tag=AD12_4832 NZ_JJLK01000090.1 Protein Homology CDS 257992 258990 . - 0 ID=cds-WP_000853753.1;Parent=gene-AD12_RS00410;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AD12_RS00410;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 259166 260539 . + . ID=gene-AD12_RS00405;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AD12_RS00405;old_locus_tag=AD12_4834 NZ_JJLK01000090.1 Protein Homology CDS 259166 260539 . + 0 ID=cds-WP_001219792.1;Parent=gene-AD12_RS00405;Dbxref=GenBank:WP_001219792.1;Name=WP_001219792.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AD12_RS00405;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 260690 261241 . - . ID=gene-AD12_RS00400;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AD12_RS00400;old_locus_tag=AD12_4835 NZ_JJLK01000090.1 Protein Homology CDS 260690 261241 . - 0 ID=cds-WP_000166270.1;Parent=gene-AD12_RS00400;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AD12_RS00400;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 261335 262687 . + . ID=gene-AD12_RS00395;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AD12_RS00395;old_locus_tag=AD12_4836 NZ_JJLK01000090.1 Protein Homology CDS 261335 262687 . + 0 ID=cds-WP_001162171.1;Parent=gene-AD12_RS00395;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AD12_RS00395;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 262870 263256 . + . ID=gene-AD12_RS00390;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AD12_RS00390;old_locus_tag=AD12_4837 NZ_JJLK01000090.1 Protein Homology CDS 262870 263256 . + 0 ID=cds-WP_001232240.1;Parent=gene-AD12_RS00390;Dbxref=GenBank:WP_001232240.1;Name=WP_001232240.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AD12_RS00390;product=cytochrome b562;protein_id=WP_001232240.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 263301 263765 . - . ID=gene-AD12_RS00385;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AD12_RS00385;old_locus_tag=AD12_4838 NZ_JJLK01000090.1 Protein Homology CDS 263301 263765 . - 0 ID=cds-WP_001106222.1;Parent=gene-AD12_RS00385;Dbxref=GenBank:WP_001106222.1;Name=WP_001106222.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709964.1;locus_tag=AD12_RS00385;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106222.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 263923 266061 . - . ID=gene-AD12_RS00380;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AD12_RS00380;old_locus_tag=AD12_4839 NZ_JJLK01000090.1 Protein Homology CDS 263923 266061 . - 0 ID=cds-WP_000187778.1;Parent=gene-AD12_RS00380;Dbxref=GenBank:WP_000187778.1;Name=WP_000187778.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AD12_RS00380;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187778.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 266455 268110 . - . ID=gene-AD12_RS00375;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AD12_RS00375;old_locus_tag=AD12_4841 NZ_JJLK01000090.1 Protein Homology CDS 266455 268110 . - 0 ID=cds-WP_001307546.1;Parent=gene-AD12_RS00375;Dbxref=GenBank:WP_001307546.1;Name=WP_001307546.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AD12_RS00375;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001307546.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 268160 269581 . - . ID=gene-AD12_RS00370;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AD12_RS00370;old_locus_tag=AD12_4842 NZ_JJLK01000090.1 Protein Homology CDS 268160 269581 . - 0 ID=cds-WP_001299664.1;Parent=gene-AD12_RS00370;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AD12_RS00370;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 269700 270647 . - . ID=gene-AD12_RS00365;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AD12_RS00365;old_locus_tag=AD12_4843 NZ_JJLK01000090.1 Protein Homology CDS 269700 270647 . - 0 ID=cds-WP_001181324.1;Parent=gene-AD12_RS00365;Dbxref=GenBank:WP_001181324.1;Name=WP_001181324.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AD12_RS00365;product=trehalose operon repressor TreR;protein_id=WP_001181324.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 270832 270885 . + . ID=gene-AD12_RS28960;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AD12_RS28960 NZ_JJLK01000090.1 Protein Homology CDS 270832 270885 . + 0 ID=cds-WP_001387276.1;Parent=gene-AD12_RS28960;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AD12_RS28960;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 271026 273722 . + . ID=gene-AD12_RS00360;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AD12_RS00360;old_locus_tag=AD12_4844 NZ_JJLK01000090.1 Protein Homology CDS 271026 273722 . + 0 ID=cds-WP_032286810.1;Parent=gene-AD12_RS00360;Dbxref=GenBank:WP_032286810.1;Name=WP_032286810.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AD12_RS00360;product=magnesium-translocating P-type ATPase;protein_id=WP_032286810.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 273928 274314 . - . ID=gene-AD12_RS00355;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AD12_RS00355;old_locus_tag=AD12_4845 NZ_JJLK01000090.1 Protein Homology CDS 273928 274314 . - 0 ID=cds-WP_000047538.1;Parent=gene-AD12_RS00355;Dbxref=GenBank:WP_000047538.1;Name=WP_000047538.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AD12_RS00355;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047538.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 274387 274848 . - . ID=gene-AD12_RS00350;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AD12_RS00350;old_locus_tag=AD12_4846 NZ_JJLK01000090.1 Protein Homology CDS 274387 274848 . - 0 ID=cds-WP_000148581.1;Parent=gene-AD12_RS00350;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AD12_RS00350;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 274861 275796 . - . ID=gene-AD12_RS00345;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AD12_RS00345;old_locus_tag=AD12_4847 NZ_JJLK01000090.1 Protein Homology CDS 274861 275796 . - 0 ID=cds-WP_000013046.1;Parent=gene-AD12_RS00345;Dbxref=GenBank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AD12_RS00345;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 275800 275934 . - . ID=gene-AD12_RS0125515;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AD12_RS0125515 NZ_JJLK01000090.1 Protein Homology CDS 275800 275934 . - 0 ID=cds-WP_001385139.1;Parent=gene-AD12_RS0125515;Dbxref=GenBank:WP_001385139.1;Name=WP_001385139.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AD12_RS0125515;product=pyr operon leader peptide;protein_id=WP_001385139.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 276215 276610 . - . ID=gene-AD12_RS00340;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AD12_RS00340;old_locus_tag=AD12_4849 NZ_JJLK01000090.1 Protein Homology CDS 276215 276610 . - 0 ID=cds-WP_000230277.1;Parent=gene-AD12_RS00340;Dbxref=GenBank:WP_000230277.1;Name=WP_000230277.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313252.1;locus_tag=AD12_RS00340;product=RidA family protein;protein_id=WP_000230277.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 276741 277454 . - . ID=gene-AD12_RS00335;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AD12_RS00335;old_locus_tag=AD12_4851 NZ_JJLK01000090.1 Protein Homology CDS 276741 277454 . - 0 ID=cds-WP_000500725.1;Parent=gene-AD12_RS00335;Dbxref=GenBank:WP_000500725.1;Name=WP_000500725.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418670.1;locus_tag=AD12_RS00335;product=SDR family oxidoreductase;protein_id=WP_000500725.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 277525 278118 . + . ID=gene-AD12_RS00330;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AD12_RS00330;old_locus_tag=AD12_4852 NZ_JJLK01000090.1 Protein Homology CDS 277525 278118 . + 0 ID=cds-WP_000256670.1;Parent=gene-AD12_RS00330;Dbxref=GenBank:WP_000256670.1;Name=WP_000256670.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=AD12_RS00330;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256670.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 278263 278715 . + . ID=gene-AD12_RS00325;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AD12_RS00325;old_locus_tag=AD12_4853 NZ_JJLK01000090.1 Protein Homology CDS 278263 278715 . + 0 ID=cds-WP_000583470.1;Parent=gene-AD12_RS00325;Dbxref=GenBank:WP_000583470.1;Name=WP_000583470.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AD12_RS00325;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_000583470.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 278838 280421 . + . ID=gene-AD12_RS00320;Name=AD12_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00320;old_locus_tag=AD12_4854 NZ_JJLK01000090.1 Protein Homology CDS 278838 280421 . + 0 ID=cds-WP_001324323.1;Parent=gene-AD12_RS00320;Dbxref=GenBank:WP_001324323.1;Name=WP_001324323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619071.1;locus_tag=AD12_RS00320;product=DNA-binding protein;protein_id=WP_001324323.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 280590 281603 . - . ID=gene-AD12_RS00315;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AD12_RS00315;old_locus_tag=AD12_4855 NZ_JJLK01000090.1 Protein Homology CDS 280590 281603 . - 0 ID=cds-WP_000012908.1;Parent=gene-AD12_RS00315;Dbxref=GenBank:WP_000012908.1;Name=WP_000012908.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709947.1;locus_tag=AD12_RS00315;product=ornithine carbamoyltransferase;protein_id=WP_000012908.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 281765 282181 . + . ID=gene-AD12_RS00310;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AD12_RS00310;old_locus_tag=AD12_4856 NZ_JJLK01000090.1 Protein Homology CDS 281765 282181 . + 0 ID=cds-WP_000002953.1;Parent=gene-AD12_RS00310;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AD12_RS00310;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 282227 282730 . - . ID=gene-AD12_RS00305;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AD12_RS00305;old_locus_tag=AD12_4857 NZ_JJLK01000090.1 Protein Homology CDS 282227 282730 . - 0 ID=cds-WP_001059398.1;Parent=gene-AD12_RS00305;Dbxref=GenBank:WP_001059398.1;Name=WP_001059398.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AD12_RS00305;product=GNAT family N-acetyltransferase;protein_id=WP_001059398.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 282923 284119 . + . ID=gene-AD12_RS00300;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AD12_RS00300;old_locus_tag=AD12_4858 NZ_JJLK01000090.1 Protein Homology CDS 282923 284119 . + 0 ID=cds-WP_000079660.1;Parent=gene-AD12_RS00300;Dbxref=GenBank:WP_000079660.1;Name=WP_000079660.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AD12_RS00300;product=YjgN family protein;protein_id=WP_000079660.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 284173 287028 . - . ID=gene-AD12_RS00295;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AD12_RS00295;old_locus_tag=AD12_4859 NZ_JJLK01000090.1 Protein Homology CDS 284173 287028 . - 0 ID=cds-WP_001426636.1;Parent=gene-AD12_RS00295;Dbxref=GenBank:WP_001426636.1;Name=WP_001426636.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AD12_RS00295;product=valine--tRNA ligase;protein_id=WP_001426636.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 287028 287471 . - . ID=gene-AD12_RS00290;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AD12_RS00290;old_locus_tag=AD12_4860 NZ_JJLK01000090.1 Protein Homology CDS 287028 287471 . - 0 ID=cds-WP_000786399.1;Parent=gene-AD12_RS00290;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AD12_RS00290;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 287825 289336 . - . ID=gene-AD12_RS00285;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AD12_RS00285;old_locus_tag=AD12_4861 NZ_JJLK01000090.1 Protein Homology CDS 287825 289336 . - 0 ID=cds-WP_032286811.1;Parent=gene-AD12_RS00285;Dbxref=GenBank:WP_032286811.1;Name=WP_032286811.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AD12_RS00285;product=leucyl aminopeptidase;protein_id=WP_032286811.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 289490 289540 . + . ID=gene-AD12_RS29340;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AD12_RS29340 NZ_JJLK01000090.1 Protein Homology CDS 289490 289540 . + 0 ID=cds-WP_211180521.1;Parent=gene-AD12_RS29340;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AD12_RS29340;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 289603 290703 . + . ID=gene-AD12_RS00280;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AD12_RS00280;old_locus_tag=AD12_4863 NZ_JJLK01000090.1 Protein Homology CDS 289603 290703 . + 0 ID=cds-WP_000584114.1;Parent=gene-AD12_RS00280;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AD12_RS00280;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 290703 291785 . + . ID=gene-AD12_RS00275;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AD12_RS00275;old_locus_tag=AD12_4864 NZ_JJLK01000090.1 Protein Homology CDS 290703 291785 . + 0 ID=cds-WP_001295681.1;Parent=gene-AD12_RS00275;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AD12_RS00275;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 291904 293406 . - . ID=gene-AD12_RS00270;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AD12_RS00270;old_locus_tag=AD12_4865 NZ_JJLK01000090.1 Protein Homology CDS 291904 293406 . - 0 ID=cds-WP_001294545.1;Parent=gene-AD12_RS00270;Dbxref=GenBank:WP_001294545.1;Name=WP_001294545.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=AD12_RS00270;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_001294545.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 293484 294482 . - . ID=gene-AD12_RS00265;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AD12_RS00265;old_locus_tag=AD12_4866 NZ_JJLK01000090.1 Protein Homology CDS 293484 294482 . - 0 ID=cds-WP_001324326.1;Parent=gene-AD12_RS00265;Dbxref=GenBank:WP_001324326.1;Name=WP_001324326.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AD12_RS00265;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001324326.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 294549 295868 . - . ID=gene-AD12_RS00260;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AD12_RS00260;old_locus_tag=AD12_4867 NZ_JJLK01000090.1 Protein Homology CDS 294549 295868 . - 0 ID=cds-WP_001128335.1;Parent=gene-AD12_RS00260;Dbxref=GenBank:WP_001128335.1;Name=WP_001128335.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AD12_RS00260;product=gnt-II system L-idonate transporter;protein_id=WP_001128335.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 295933 296697 . - . ID=gene-AD12_RS00255;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AD12_RS00255;old_locus_tag=AD12_4868 NZ_JJLK01000090.1 Protein Homology CDS 295933 296697 . - 0 ID=cds-WP_000998697.1;Parent=gene-AD12_RS00255;Dbxref=GenBank:WP_000998697.1;Name=WP_000998697.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AD12_RS00255;product=gluconate 5-dehydrogenase;protein_id=WP_000998697.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 296721 297752 . - . ID=gene-AD12_RS00250;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AD12_RS00250;old_locus_tag=AD12_4869 NZ_JJLK01000090.1 Protein Homology CDS 296721 297752 . - 0 ID=cds-WP_001197415.1;Parent=gene-AD12_RS00250;Dbxref=GenBank:WP_001197415.1;Name=WP_001197415.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AD12_RS00250;product=L-idonate 5-dehydrogenase;protein_id=WP_001197415.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 297969 298532 . + . ID=gene-AD12_RS00245;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AD12_RS00245;old_locus_tag=AD12_4870 NZ_JJLK01000090.1 Protein Homology CDS 297969 298532 . + 0 ID=cds-WP_000896738.1;Parent=gene-AD12_RS00245;Dbxref=GenBank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AD12_RS00245;product=gluconokinase;protein_id=WP_000896738.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 298536 299555 . - . ID=gene-AD12_RS00240;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AD12_RS00240;old_locus_tag=AD12_4871 NZ_JJLK01000090.1 Protein Homology CDS 298536 299555 . - 0 ID=cds-WP_032286812.1;Parent=gene-AD12_RS00240;Dbxref=GenBank:WP_032286812.1;Name=WP_032286812.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AD12_RS00240;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_032286812.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 299751 299835 . + . ID=gene-AD12_RS00235;Name=AD12_RS00235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD12_RS00235;old_locus_tag=AD12_4872 NZ_JJLK01000090.1 tRNAscan-SE tRNA 299751 299835 . + . ID=rna-AD12_RS00235;Parent=gene-AD12_RS00235;anticodon=(pos:299785..299787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00235;product=tRNA-Leu NZ_JJLK01000090.1 tRNAscan-SE exon 299751 299835 . + . ID=exon-AD12_RS00235-1;Parent=rna-AD12_RS00235;anticodon=(pos:299785..299787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD12_RS00235;product=tRNA-Leu NZ_JJLK01000090.1 RefSeq gene 300022 301287 . + . ID=gene-AD12_RS00230;Name=AD12_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00230;old_locus_tag=AD12_4873 NZ_JJLK01000090.1 Protein Homology CDS 300022 301287 . + 0 ID=cds-WP_001218930.1;Parent=gene-AD12_RS00230;Dbxref=GenBank:WP_001218930.1;Name=WP_001218930.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AD12_RS00230;product=tyrosine-type recombinase/integrase;protein_id=WP_001218930.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 301836 302068 . + . ID=gene-AD12_RS28405;Name=AD12_RS28405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28405;partial=true;pseudo=true;start_range=.,301836 NZ_JJLK01000090.1 Protein Homology CDS 301836 302068 . + 0 ID=cds-AD12_RS28405;Parent=gene-AD12_RS28405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=AD12_RS28405;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,301836;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 302865 303647 . - . ID=gene-AD12_RS00225;Name=AD12_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00225;old_locus_tag=AD12_4875 NZ_JJLK01000090.1 Protein Homology CDS 302865 303647 . - 0 ID=cds-WP_000481333.1;Parent=gene-AD12_RS00225;Dbxref=GenBank:WP_000481333.1;Name=WP_000481333.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001548062.1;locus_tag=AD12_RS00225;product=EAL domain-containing protein;protein_id=WP_000481333.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 303704 304696 . - . ID=gene-AD12_RS00220;Name=AD12_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00220;old_locus_tag=AD12_4876 NZ_JJLK01000090.1 Protein Homology CDS 303704 304696 . - 0 ID=cds-WP_000878336.1;Parent=gene-AD12_RS00220;Dbxref=GenBank:WP_000878336.1;Name=WP_000878336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774676.1;locus_tag=AD12_RS00220;product=hypothetical protein;protein_id=WP_000878336.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 304719 305237 . - . ID=gene-AD12_RS0125535;Name=AD12_RS0125535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125535 NZ_JJLK01000090.1 Protein Homology CDS 304719 305237 . - 0 ID=cds-WP_001223371.1;Parent=gene-AD12_RS0125535;Dbxref=GenBank:WP_001223371.1;Name=WP_001223371.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519251.1;locus_tag=AD12_RS0125535;product=fimbrial protein;protein_id=WP_001223371.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 305321 305830 . - . ID=gene-AD12_RS00215;Name=AD12_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00215;old_locus_tag=AD12_4877 NZ_JJLK01000090.1 Protein Homology CDS 305321 305830 . - 0 ID=cds-WP_230075137.1;Parent=gene-AD12_RS00215;Dbxref=GenBank:WP_230075137.1;Name=WP_230075137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077948.1;locus_tag=AD12_RS00215;product=pilus-assembly fibrillin subunit;protein_id=WP_230075137.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 305921 306652 . - . ID=gene-AD12_RS00210;Name=AD12_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00210;old_locus_tag=AD12_4878 NZ_JJLK01000090.1 Protein Homology CDS 305921 306652 . - 0 ID=cds-WP_001171049.1;Parent=gene-AD12_RS00210;Dbxref=GenBank:WP_001171049.1;Name=WP_001171049.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842694.1;locus_tag=AD12_RS00210;product=fimbrial biogenesis chaperone;protein_id=WP_001171049.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 306721 309231 . - . ID=gene-AD12_RS00205;Name=AD12_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00205;old_locus_tag=AD12_4879 NZ_JJLK01000090.1 Protein Homology CDS 306721 309231 . - 0 ID=cds-WP_032286814.1;Parent=gene-AD12_RS00205;Dbxref=GenBank:WP_032286814.1;Name=WP_032286814.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842695.1;locus_tag=AD12_RS00205;product=fimbria/pilus outer membrane usher protein;protein_id=WP_032286814.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 309352 309939 . - . ID=gene-AD12_RS00200;Name=AD12_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00200;old_locus_tag=AD12_4880 NZ_JJLK01000090.1 Protein Homology CDS 309352 309939 . - 0 ID=cds-WP_000498858.1;Parent=gene-AD12_RS00200;Dbxref=GenBank:WP_000498858.1;Name=WP_000498858.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946201.1;locus_tag=AD12_RS00200;product=fimbrial protein;protein_id=WP_000498858.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 310026 310538 . - . ID=gene-AD12_RS0125540;Name=AD12_RS0125540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125540 NZ_JJLK01000090.1 Protein Homology CDS 310026 310538 . - 0 ID=cds-WP_000920488.1;Parent=gene-AD12_RS0125540;Dbxref=GenBank:WP_000920488.1;Name=WP_000920488.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920488.1;locus_tag=AD12_RS0125540;product=fimbrial protein;protein_id=WP_000920488.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 310583 310858 . - . ID=gene-AD12_RS0125545;Name=AD12_RS0125545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125545 NZ_JJLK01000090.1 Protein Homology CDS 310583 310858 . - 0 ID=cds-WP_071531309.1;Parent=gene-AD12_RS0125545;Dbxref=GenBank:WP_071531309.1;Name=WP_071531309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015301.6;locus_tag=AD12_RS0125545;product=adhesin biosynthesis transcription regulatory family protein;protein_id=WP_071531309.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 311286 312154 . - . ID=gene-AD12_RS27735;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AD12_RS27735;partial=true;pseudo=true;start_range=.,311286 NZ_JJLK01000090.1 Protein Homology CDS 311286 312154 . - 0 ID=cds-AD12_RS27735;Parent=gene-AD12_RS27735;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174402.1;locus_tag=AD12_RS27735;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,311286;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 312478 313725 . - . ID=gene-AD12_RS00185;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=AD12_RS00185;old_locus_tag=AD12_4885 NZ_JJLK01000090.1 Protein Homology CDS 312478 313725 . - 0 ID=cds-WP_000952905.1;Parent=gene-AD12_RS00185;Dbxref=GenBank:WP_000952905.1;Name=WP_000952905.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001765251.1;locus_tag=AD12_RS00185;product=two-component system response regulator PgtA;protein_id=WP_000952905.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 313715 315724 . - . ID=gene-AD12_RS00180;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=AD12_RS00180;old_locus_tag=AD12_4886 NZ_JJLK01000090.1 Protein Homology CDS 313715 315724 . - 0 ID=cds-WP_000790444.1;Parent=gene-AD12_RS00180;Dbxref=GenBank:WP_000790444.1;Name=WP_000790444.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790444.1;locus_tag=AD12_RS00180;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000790444.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 315721 316938 . - . ID=gene-AD12_RS00175;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=AD12_RS00175;old_locus_tag=AD12_4887 NZ_JJLK01000090.1 Protein Homology CDS 315721 316938 . - 0 ID=cds-WP_101766856.1;Parent=gene-AD12_RS00175;Dbxref=GenBank:WP_101766856.1;Name=WP_101766856.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317576.1;locus_tag=AD12_RS00175;product=phosphoglycerate transport regulator PgtC;protein_id=WP_101766856.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 317337 318701 . + . ID=gene-AD12_RS00170;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=AD12_RS00170;old_locus_tag=AD12_4888 NZ_JJLK01000090.1 Protein Homology CDS 317337 318701 . + 0 ID=cds-WP_000948757.1;Parent=gene-AD12_RS00170;Dbxref=GenBank:WP_000948757.1;Name=WP_000948757.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842475.1;locus_tag=AD12_RS00170;product=phosphoglycerate transporter PgtP;protein_id=WP_000948757.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 318993 319643 . + . ID=gene-AD12_RS00165;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD12_RS00165;old_locus_tag=AD12_4890 NZ_JJLK01000090.1 Protein Homology CDS 318993 319643 . + 0 ID=cds-WP_000993925.1;Parent=gene-AD12_RS00165;Dbxref=GenBank:WP_000993925.1;Name=WP_000993925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AD12_RS00165;product=IS66-like element accessory protein TnpA;protein_id=WP_000993925.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 319643 319990 . + . ID=gene-AD12_RS0125550;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD12_RS0125550 NZ_JJLK01000090.1 Protein Homology CDS 319643 319990 . + 0 ID=cds-WP_032286815.1;Parent=gene-AD12_RS0125550;Dbxref=GenBank:WP_032286815.1;Name=WP_032286815.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AD12_RS0125550;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032286815.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 320010 320993 . + . ID=gene-AD12_RS00160;Name=tnpC;end_range=320993,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AD12_RS00160;old_locus_tag=AD12_4891;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 320010 320993 . + 0 ID=cds-AD12_RS00160;Parent=gene-AD12_RS00160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=320993,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD12_RS00160;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 321007 321912 . - . ID=gene-AD12_RS00155;Name=AD12_RS00155;end_range=321912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS00155;old_locus_tag=AD12_4892;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 321007 321912 . - 0 ID=cds-AD12_RS00155;Parent=gene-AD12_RS00155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=321912,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AD12_RS00155;partial=true;product=IS3-like element ISEc31 family transposase;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 321977 323128 . + . ID=gene-AD12_RS00150;Name=AD12_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00150;old_locus_tag=AD12_4894 NZ_JJLK01000090.1 Protein Homology CDS 321977 323128 . + 0 ID=cds-WP_001254937.1;Parent=gene-AD12_RS00150;Dbxref=GenBank:WP_001254937.1;Name=WP_001254937.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AD12_RS00150;product=IS30-like element IS30 family transposase;protein_id=WP_001254937.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 323138 324043 . + . ID=gene-AD12_RS28975;Name=AD12_RS28975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28975;old_locus_tag=AD12_4895;partial=true;pseudo=true;start_range=.,323138 NZ_JJLK01000090.1 Protein Homology CDS 323138 324043 . + 0 ID=cds-AD12_RS28975;Parent=gene-AD12_RS28975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AD12_RS28975;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,323138;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 324126 324383 . + . ID=gene-AD12_RS28980;Name=AD12_RS28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS28980;old_locus_tag=AD12_4896 NZ_JJLK01000090.1 GeneMarkS-2+ CDS 324126 324383 . + 0 ID=cds-WP_000177057.1;Parent=gene-AD12_RS28980;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD12_RS28980;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 324941 325708 . - . ID=gene-AD12_RS0125560;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AD12_RS0125560;old_locus_tag=AD12_4897 NZ_JJLK01000090.1 Protein Homology CDS 324941 325708 . - 0 ID=cds-WP_000175457.1;Parent=gene-AD12_RS0125560;Dbxref=GenBank:WP_000175457.1;Name=WP_000175457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AD12_RS0125560;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 325709 326665 . - . ID=gene-AD12_RS00135;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AD12_RS00135;old_locus_tag=AD12_4899 NZ_JJLK01000090.1 Protein Homology CDS 325709 326665 . - 0 ID=cds-WP_000684865.1;Parent=gene-AD12_RS00135;Dbxref=GenBank:WP_000684865.1;Name=WP_000684865.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AD12_RS00135;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684865.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 326662 327660 . - . ID=gene-AD12_RS00130;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AD12_RS00130;old_locus_tag=AD12_4900 NZ_JJLK01000090.1 Protein Homology CDS 326662 327660 . - 0 ID=cds-WP_000125182.1;Parent=gene-AD12_RS00130;Dbxref=GenBank:WP_000125182.1;Name=WP_000125182.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AD12_RS00130;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125182.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 327657 328559 . - . ID=gene-AD12_RS00125;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AD12_RS00125;old_locus_tag=AD12_4901 NZ_JJLK01000090.1 Protein Homology CDS 327657 328559 . - 0 ID=cds-WP_000879160.1;Parent=gene-AD12_RS00125;Dbxref=GenBank:WP_000879160.1;Name=WP_000879160.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AD12_RS00125;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879160.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 328604 330928 . - . ID=gene-AD12_RS00120;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AD12_RS00120;old_locus_tag=AD12_4902 NZ_JJLK01000090.1 Protein Homology CDS 328604 330928 . - 0 ID=cds-WP_000188255.1;Parent=gene-AD12_RS00120;Dbxref=GenBank:WP_000188255.1;Name=WP_000188255.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AD12_RS00120;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_000188255.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 331015 331968 . - . ID=gene-AD12_RS00115;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AD12_RS00115;old_locus_tag=AD12_4903 NZ_JJLK01000090.1 Protein Homology CDS 331015 331968 . - 0 ID=cds-WP_001068910.1;Parent=gene-AD12_RS00115;Dbxref=GenBank:WP_001068910.1;Name=WP_001068910.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AD12_RS00115;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001068910.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 331965 332486 . - . ID=gene-AD12_RS00110;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AD12_RS00110;old_locus_tag=AD12_4904 NZ_JJLK01000090.1 Protein Homology CDS 331965 332486 . - 0 ID=cds-WP_001283626.1;Parent=gene-AD12_RS00110;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AD12_RS00110;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JJLK01000090.1 RefSeq gene 332623 332691 . + . ID=gene-AD12_RS29345;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AD12_RS29345 NZ_JJLK01000090.1 Protein Homology CDS 332623 332691 . + 0 ID=cds-WP_211180522.1;Parent=gene-AD12_RS29345;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AD12_RS29345;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 332778 333475 . + . ID=gene-AD12_RS28425;Name=AD12_RS28425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS28425;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 332778 333475 . + 0 ID=cds-AD12_RS28425;Parent=gene-AD12_RS28425;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AD12_RS28425;product=IS1-like element IS1F family transposase;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 333486 333557 . - . ID=gene-AD12_RS29835;Name=AD12_RS29835;end_range=333557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29835;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 333486 333557 . - 0 ID=cds-AD12_RS29835;Parent=gene-AD12_RS29835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=333557,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AD12_RS29835;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLK01000090.1 RefSeq pseudogene 333595 334770 . + . ID=gene-AD12_RS00095;Name=AD12_RS00095;end_range=334770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS00095;old_locus_tag=AD12_4909;partial=true;pseudo=true NZ_JJLK01000090.1 Protein Homology CDS 333595 334770 . + 0 ID=cds-AD12_RS00095;Parent=gene-AD12_RS00095;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=334770,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=AD12_RS00095;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLK01000091.1 1 28779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444247 NZ_JJLK01000091.1 RefSeq region 1 28779 . + . ID=NZ_JJLK01000091.1:1..28779;Dbxref=taxon:1444247;collection-date=2009-07-03;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S4_C2 NZ_JJLK01000091.1 RefSeq gene 1 299 . + . ID=gene-AD12_RS00090;Name=AD12_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00090;old_locus_tag=AD12_4910;partial=true;start_range=.,1 NZ_JJLK01000091.1 Protein Homology CDS 1 299 . + 2 ID=cds-WP_000563552.1;Parent=gene-AD12_RS00090;Dbxref=GenBank:WP_000563552.1;Name=WP_000563552.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD12_RS00090;partial=true;product=IS3 family transposase;protein_id=WP_000563552.1;start_range=.,1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 699 1964 . + . ID=gene-AD12_RS00085;Name=AD12_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00085;old_locus_tag=AD12_4911 NZ_JJLK01000091.1 Protein Homology CDS 699 1964 . + 0 ID=cds-WP_001218329.1;Parent=gene-AD12_RS00085;Dbxref=GenBank:WP_001218329.1;Name=WP_001218329.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003924703.1;locus_tag=AD12_RS00085;product=tyrosine-type recombinase/integrase;protein_id=WP_001218329.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 2165 3634 . - . ID=gene-AD12_RS00080;Name=AD12_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00080;old_locus_tag=AD12_4912 NZ_JJLK01000091.1 Protein Homology CDS 2165 3634 . - 0 ID=cds-WP_001022619.1;Parent=gene-AD12_RS00080;Dbxref=GenBank:WP_001022619.1;Name=WP_001022619.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022617.1;locus_tag=AD12_RS00080;product=serine/threonine-protein kinase;protein_id=WP_001022619.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 3631 4173 . - . ID=gene-AD12_RS0125575;Name=AD12_RS0125575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125575;old_locus_tag=AD12_4913 NZ_JJLK01000091.1 Protein Homology CDS 3631 4173 . - 0 ID=cds-WP_001115385.1;Parent=gene-AD12_RS0125575;Dbxref=GenBank:WP_001115385.1;Name=WP_001115385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115385.1;locus_tag=AD12_RS0125575;product=hypothetical protein;protein_id=WP_001115385.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 4181 5866 . - . ID=gene-AD12_RS00075;Name=AD12_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00075;old_locus_tag=AD12_4914 NZ_JJLK01000091.1 Protein Homology CDS 4181 5866 . - 0 ID=cds-WP_000323666.1;Parent=gene-AD12_RS00075;Dbxref=GenBank:WP_000323666.1;Name=WP_000323666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106735.1;locus_tag=AD12_RS00075;product=helicase HerA domain-containing protein;protein_id=WP_000323666.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 5856 7013 . - . ID=gene-AD12_RS00070;Name=AD12_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00070;old_locus_tag=AD12_4915 NZ_JJLK01000091.1 Protein Homology CDS 5856 7013 . - 0 ID=cds-WP_001004904.1;Parent=gene-AD12_RS00070;Dbxref=GenBank:WP_001004904.1;Name=WP_001004904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004905.1;locus_tag=AD12_RS00070;product=hypothetical protein;protein_id=WP_001004904.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 7016 7864 . - . ID=gene-AD12_RS00065;Name=AD12_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00065;old_locus_tag=AD12_4916 NZ_JJLK01000091.1 Protein Homology CDS 7016 7864 . - 0 ID=cds-WP_032286818.1;Parent=gene-AD12_RS00065;Dbxref=GenBank:WP_032286818.1;Name=WP_032286818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222254.1;locus_tag=AD12_RS00065;product=hypothetical protein;protein_id=WP_032286818.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 7875 12161 . - . ID=gene-AD12_RS00060;Name=AD12_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00060;old_locus_tag=AD12_4917 NZ_JJLK01000091.1 Protein Homology CDS 7875 12161 . - 0 ID=cds-WP_000007262.1;Parent=gene-AD12_RS00060;Dbxref=GenBank:WP_000007262.1;Name=WP_000007262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584427.1;locus_tag=AD12_RS00060;product=hypothetical protein;protein_id=WP_000007262.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 12158 13444 . - . ID=gene-AD12_RS00055;Name=AD12_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00055;old_locus_tag=AD12_4918 NZ_JJLK01000091.1 Protein Homology CDS 12158 13444 . - 0 ID=cds-WP_000377423.1;Parent=gene-AD12_RS00055;Dbxref=GenBank:WP_000377423.1;Name=WP_000377423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377422.1;locus_tag=AD12_RS00055;product=hypothetical protein;protein_id=WP_000377423.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 13462 15153 . - . ID=gene-AD12_RS00050;Name=AD12_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00050;old_locus_tag=AD12_4919 NZ_JJLK01000091.1 Protein Homology CDS 13462 15153 . - 0 ID=cds-WP_000287363.1;Parent=gene-AD12_RS00050;Dbxref=GenBank:WP_000287363.1;Name=WP_000287363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287363.1;locus_tag=AD12_RS00050;product=restriction endonuclease subunit S;protein_id=WP_000287363.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 15153 17300 . - . ID=gene-AD12_RS00045;Name=AD12_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00045;old_locus_tag=AD12_4920 NZ_JJLK01000091.1 Protein Homology CDS 15153 17300 . - 0 ID=cds-WP_001040178.1;Parent=gene-AD12_RS00045;Dbxref=GenBank:WP_001040178.1;Name=WP_001040178.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040176.1;locus_tag=AD12_RS00045;product=HsdM family class I SAM-dependent methyltransferase;protein_id=WP_001040178.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 17351 17737 . - . ID=gene-AD12_RS0125580;Name=AD12_RS0125580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS0125580 NZ_JJLK01000091.1 Protein Homology CDS 17351 17737 . - 0 ID=cds-WP_000148646.1;Parent=gene-AD12_RS0125580;Dbxref=GenBank:WP_000148646.1;Name=WP_000148646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222267.1;locus_tag=AD12_RS0125580;product=hypothetical protein;protein_id=WP_000148646.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 17734 19077 . - . ID=gene-AD12_RS00040;Name=AD12_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00040;old_locus_tag=AD12_4922 NZ_JJLK01000091.1 Protein Homology CDS 17734 19077 . - 0 ID=cds-WP_032286819.1;Parent=gene-AD12_RS00040;Dbxref=GenBank:WP_032286819.1;Name=WP_032286819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617353.1;locus_tag=AD12_RS00040;product=McrC family protein;protein_id=WP_032286819.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 19070 21145 . - . ID=gene-AD12_RS00035;Name=AD12_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00035;old_locus_tag=AD12_4923 NZ_JJLK01000091.1 Protein Homology CDS 19070 21145 . - 0 ID=cds-WP_000177023.1;Parent=gene-AD12_RS00035;Dbxref=GenBank:WP_000177023.1;Name=WP_000177023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177022.1;locus_tag=AD12_RS00035;product=McrB family protein;protein_id=WP_000177023.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 21315 22187 . - . ID=gene-AD12_RS00030;Name=AD12_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS00030;old_locus_tag=AD12_4924 NZ_JJLK01000091.1 Protein Homology CDS 21315 22187 . - 0 ID=cds-WP_000168567.1;Parent=gene-AD12_RS00030;Dbxref=GenBank:WP_000168567.1;Name=WP_000168567.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168579.1;locus_tag=AD12_RS00030;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000168567.1;transl_table=11 NZ_JJLK01000091.1 RefSeq pseudogene 22287 22391 . + . ID=gene-AD12_RS27760;Name=AD12_RS27760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS27760;old_locus_tag=AD12_4926;partial=true;pseudo=true;start_range=.,22287 NZ_JJLK01000091.1 Protein Homology CDS 22287 22391 . + 0 ID=cds-AD12_RS27760;Parent=gene-AD12_RS27760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586610.1;locus_tag=AD12_RS27760;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,22287;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 22391 22480 . + . ID=gene-AD12_RS29965;Name=AD12_RS29965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD12_RS29965 NZ_JJLK01000091.1 Protein Homology CDS 22391 22480 . + 0 ID=cds-WP_418267963.1;Parent=gene-AD12_RS29965;Dbxref=GenBank:WP_418267963.1;Name=WP_418267963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AD12_RS29965;product=hypothetical protein;protein_id=WP_418267963.1;transl_table=11 NZ_JJLK01000091.1 RefSeq pseudogene 22813 23379 . - . ID=gene-AD12_RS29970;Name=AD12_RS29970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD12_RS29970;partial=true;pseudo=true;start_range=.,22813 NZ_JJLK01000091.1 Protein Homology CDS 22813 23379 . - 0 ID=cds-AD12_RS29970;Parent=gene-AD12_RS29970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AD12_RS29970;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,22813;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 23444 24550 . - . ID=gene-AD12_RS00020;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AD12_RS00020;old_locus_tag=AD12_4928 NZ_JJLK01000091.1 Protein Homology CDS 23444 24550 . - 0 ID=cds-WP_001298927.1;Parent=gene-AD12_RS00020;Dbxref=GenBank:WP_001298927.1;Name=WP_001298927.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AD12_RS00020;product=N-acetylneuraminate epimerase;protein_id=WP_001298927.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 24570 25286 . - . ID=gene-AD12_RS00015;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AD12_RS00015;old_locus_tag=AD12_4929 NZ_JJLK01000091.1 Protein Homology CDS 24570 25286 . - 0 ID=cds-WP_001585304.1;Parent=gene-AD12_RS00015;Dbxref=GenBank:WP_001585304.1;Name=WP_001585304.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AD12_RS00015;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001585304.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 26742 27344 . + . ID=gene-AD12_RS00010;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AD12_RS00010;old_locus_tag=AD12_4930 NZ_JJLK01000091.1 Protein Homology CDS 26742 27344 . + 0 ID=cds-WP_000790583.1;Parent=gene-AD12_RS00010;Dbxref=GenBank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AD12_RS00010;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11 NZ_JJLK01000091.1 RefSeq gene 27822 28418 . + . ID=gene-AD12_RS00005;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AD12_RS00005;old_locus_tag=AD12_4931 NZ_JJLK01000091.1 Protein Homology CDS 27822 28418 . + 0 ID=cds-WP_000044711.1-2;Parent=gene-AD12_RS00005;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AD12_RS00005;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 ###